BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009470
         (534 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g20300, mitochondrial; Flags: Precursor
 gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
           from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
           contains multiple PPR PF|01535 repeats [Arabidopsis
           thaliana]
 gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
 gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
 gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 537

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/540 (70%), Positives = 447/540 (82%), Gaps = 9/540 (1%)

Query: 1   MALIKSNHRLPFSLS---QQIPKAYSFFSS--LAPLNEDDDGDCVTNPNSSPDTPFLSPE 55
           MAL++S   L  +LS     +PK +S  ++  L+    D+    +T   S P +P L+PE
Sbjct: 1   MALLRSKLHLSRTLSFISPLLPKTFSTSATSLLSDHENDESAATITAAVSVPISPLLTPE 60

Query: 56  ETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHV 115
           +T   EKFHS+IKDH+RKNP  +S ++  LNP  T+ +LSL FSQI T+  +SPS VR V
Sbjct: 61  DTQTVEKFHSIIKDHYRKNP--TSPNDAILNPSLTLHALSLDFSQIETSQ-VSPSVVRCV 117

Query: 116 IEKSCGVRHGIPLLQVLSFFNWVTARPEFVH-SPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           IEK   VRHGIPL Q L+FFNW T+R ++ H SP  Y+EMI+L+GKVRQFDLAWH IDLM
Sbjct: 118 IEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLM 177

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           KSRNVEI+++TF+IL+RRYVRAGLA+EAVH FNRME+YGC PDKIAFSIVIS L RKRRA
Sbjct: 178 KSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRA 237

Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           SEAQSFFDSLKD+FEPDVIVYTNLVRGWCRAG ISEAE+VF+EMK+AGI+PNVYTYSIVI
Sbjct: 238 SEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVI 297

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           DALCRCGQI+RAHDVFA+ML+ GC PN+ITFNNLMRVHVKA RTEKVLQVYNQMK+LGCE
Sbjct: 298 DALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            DTITYNFLI+ HC+D  LE+A+KVLN+M++K C  NASTFN IFR I K  DVNGAHRM
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM 417

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           Y KM + KCEPNTVTYNILM+MF  SKSTDMVLK+KKEM++ EVEPNVNTYR+L+TM+CG
Sbjct: 418 YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 477

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           MGHWNNAYK  +EM+EEKCL P  S+YEMVL QLRRAGQL+KHEELVEKM+ +G  ARPL
Sbjct: 478 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537


>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 528

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/536 (71%), Positives = 436/536 (81%), Gaps = 10/536 (1%)

Query: 1   MALIKSNHRLPFSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPD--TPFLSPEETL 58
           MA IK++ R+P  LS   P     FSS    +         + +   D   P LS EET 
Sbjct: 1   MAAIKASLRVPAPLSHLSPTFLRSFSSSITTSSSSSSIISQSQHLEEDYINPSLSFEETT 60

Query: 59  ISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEK 118
           ++ KFHSLIKDHHR+NPN S  + PS        SLSL FS  ST+  +SPS V HVIEK
Sbjct: 61  LANKFHSLIKDHHRRNPNFSLPNTPS-------HSLSLDFSHFSTS-PVSPSLVSHVIEK 112

Query: 119 SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN 178
              VRHGIP  Q LSFFNW T+RP F H P+ Y+EMI+LAGKVR FDL W  IDLMK+RN
Sbjct: 113 CAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARN 172

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           VEI+++TFSIL+RRYVRAGLA+EAVHAFNRME+Y C PDKIAFSI+ISILCRKRRA+EAQ
Sbjct: 173 VEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQ 232

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           SFFDSLKDKFEPDVIVYTNLVRGWCRAGNI EAERVF EMK+AG  PNVYTY+IVIDALC
Sbjct: 233 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALC 292

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           RCGQITRAHDVFAEML+VGCEPNSITFNNL+RVHVKA RTEKVLQVYNQMKR+GC  DT+
Sbjct: 293 RCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTV 352

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TYNFLI+ HCKDG L++A+KVLNSMV+KGC+PNASTFN +F  I+KL DVNGAHR+Y KM
Sbjct: 353 TYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKM 412

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           K+LKC+ NTVTYNILM+MF  +KSTDMVLKLKKEM+E++VEPNVNTY +LI MYCGMGHW
Sbjct: 413 KELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHW 472

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           NNAYK+ REM+EEKCLKP   VYE VLQQLR+AGQL+KHEELV  MVDRGF  RPL
Sbjct: 473 NNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGFATRPL 528


>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/538 (72%), Positives = 444/538 (82%), Gaps = 11/538 (2%)

Query: 1   MALIKSNHRLP---FSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEET 57
           MAL+KS  RL    +SLS     ++  +SS +  +E++D   V    +S     LS EET
Sbjct: 1   MALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASEEEDE--VKESGNSAVNIVLSSEET 58

Query: 58  LISEKFHSLIKDHHRKNPNPSSNSNP-SLNPDFTIPSLSLGFSQISTAHSISPSTVRHVI 116
           L+ EKFHSLIK H RKN NP    +P S NP +TI SLS  FSQIS+A S+S + VR VI
Sbjct: 59  LVVEKFHSLIKSHQRKNTNP----DPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVI 114

Query: 117 EKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKS 176
           EK  GVRHGIP  Q L+FFNW T   EF HSP+ Y EMI+LAGKVRQFDLAW  IDLMK+
Sbjct: 115 EKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKT 174

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           RNVEI V+TF+ILVRRYV+AGLAAEAVHAFNRME+YGC PDKIAFS+VIS L +KRRA E
Sbjct: 175 RNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIE 234

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           AQSFFDSLKD+FEPDV+VYT+LV GWCRAGNISEAERVF EMKMAGIQPNVYTYSIVIDA
Sbjct: 235 AQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDA 294

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LCR GQITRAHDVF+EM++VGC+PN+ITFNNLMRVHVKA RTEKVLQVYNQMKRLGC  D
Sbjct: 295 LCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPD 354

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            ITYNFLI+ HC+D  LE+A+K+LNS V+KGCN NAS+FN IF CISKLGDVN AHRM+ 
Sbjct: 355 AITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFA 413

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           KMKDLKC PNTVTYNILM+MFA  KSTDMVLKL+KEM+ENE+EPN NTYR+LI+ +CG+G
Sbjct: 414 KMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIG 473

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           HWNNAY + +EMIEEKCL+P   VYEMVLQQLR+AGQL+KHEELVEKMV+RGF  RPL
Sbjct: 474 HWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 531


>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
 gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/484 (75%), Positives = 422/484 (87%), Gaps = 5/484 (1%)

Query: 52  LSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQI-STAHSISPS 110
           LSPE+TLI+EKFHSL+K+H+  NP  +    P  +P +TI SLSL FSQI ST  SISPS
Sbjct: 1   LSPEDTLIAEKFHSLMKEHYLSNPRKT----PPPDPTYTISSLSLDFSQIISTVRSISPS 56

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
            VRHVI +S  VRHGIP+ QVL+FFNW + +  F  SP+ Y+EM++ +G+V  FD+AW+F
Sbjct: 57  IVRHVIAQSSAVRHGIPVPQVLAFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYF 116

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           IDLMK+RNV++TV+TF IL+RRYVRAGLAAEA+HAFNRME+Y C PDKIAFSI+ISILCR
Sbjct: 117 IDLMKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCR 176

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           +RRAS+AQ FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF EMK+AGI+PNVYTY
Sbjct: 177 ERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTY 236

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           SIVID+LCRCGQITRAHD+FAEML+ GC+PNSIT+N+LMR+HVKA RTEKVLQVYNQMKR
Sbjct: 237 SIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKR 296

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
           LGCE DT+TYNFLI+ HCKD  LEDAIKV+  M +KGC PNASTFN +F CI+KLGDVN 
Sbjct: 297 LGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNA 356

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           AHRMY KMK+L CE NTVTYN LM+MF  SKSTDMVLKLK EM+EN++EPNVNTY++LIT
Sbjct: 357 AHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLIT 416

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           MYCGMGHWNNAYK+ REMI+EKCL+P   VY+MVLQQLR+AGQL+KHEELVEKMVDRGF 
Sbjct: 417 MYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVDRGFV 476

Query: 531 ARPL 534
            RPL
Sbjct: 477 TRPL 480


>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 537

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/542 (70%), Positives = 446/542 (82%), Gaps = 13/542 (2%)

Query: 1   MALIKSNHRLPFSLS---QQIPKAYSFFSSLAPLNE---DDDGDCVTNPNSSPDTPFLSP 54
           MAL++S   L  +LS    ++PK +S  S  + LN+   D+    VT   S P +  L+P
Sbjct: 1   MALLRSKLHLSRTLSFISPRLPKPFST-SPTSLLNDHENDESAATVTGVVSVPVSSLLTP 59

Query: 55  EETLISEKFHSLIKDHHRKNP-NPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVR 113
           E+T   EKFHS+IKDH+RKNP NP+   +  LNP  T+P+LSL FSQI  A  ISPS VR
Sbjct: 60  EDTQTVEKFHSIIKDHYRKNPTNPN---DAVLNPSLTLPALSLDFSQID-ASRISPSVVR 115

Query: 114 HVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVH-SPDLYHEMINLAGKVRQFDLAWHFID 172
            VIEK   VRHGIPL Q L+FFNW T+R ++   SP  Y+EMI+LAGKVRQFDLAWH ID
Sbjct: 116 CVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLID 175

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           LMKSRNVEI+++TF+IL+RRYVRAGLA+EAVH FNRME+YGC PD+IAFSIVIS L RKR
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKR 235

Query: 233 RASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           RASEAQSFFDSLKD+FEPDVIVYTNLVRGWCRAG ISEAE+VF++MK+AGI+PNVYTYSI
Sbjct: 236 RASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSI 295

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VIDALCRCGQI+RAHDVFA+ML+ GC PN+ITFNNLMRVHVKA R EKVLQVYNQMK+LG
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLG 355

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           CE DTITYNFLI+ HC+D  LE+A+KVLN+M++K C  NASTFN IFR I K  DVNGAH
Sbjct: 356 CEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           RMY KM + KCEPNTVTYNILM+MFA SKSTDMVLK+KK+M++ EVEPNVNTYR+L+TM+
Sbjct: 416 RMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMF 475

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           CGMGHWNNAYK  +EM+EEKCL P  S+YEMVL QLRRAGQL+KHEELVEKM+ +G   R
Sbjct: 476 CGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVTR 535

Query: 533 PL 534
           PL
Sbjct: 536 PL 537


>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/537 (71%), Positives = 441/537 (82%), Gaps = 9/537 (1%)

Query: 1    MALIKSNHRLP---FSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEET 57
            MAL+KS  RL    +SLS     ++  +SS +  +E++D   V    +S     LS EET
Sbjct: 1033 MALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASEEEDE--VKESGNSAVNIVLSSEET 1090

Query: 58   LISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIE 117
            L+ EKFHSLIK H RKN NP   S    NP +TI SLS  FSQIS+A S+S + VR VIE
Sbjct: 1091 LVVEKFHSLIKSHQRKNTNPDPISP---NPHYTIASLSFDFSQISSADSVSSAIVRRVIE 1147

Query: 118  KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
            K  GVRHGIP  Q L+FFNW T   EF HSP+ Y EMI+LAGKVRQFDLAW  IDLMK+R
Sbjct: 1148 KCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTR 1207

Query: 178  NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
            NVEI V+TF+ILVRRYV+AGLAAEAVHAFNRME+YGC PDKIAFS+VIS L +KRRA EA
Sbjct: 1208 NVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEA 1267

Query: 238  QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
            QSFFDSLKD+FEPDV+VYT+LV GWCRAGNISEAERVF EMKMAGI PNVYTYSIVIDAL
Sbjct: 1268 QSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDAL 1327

Query: 298  CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
            CR GQITRAHDVF+EM++VGC+PN+ITFNNLMRVHVKA RTEKVLQVYNQMKRLGC  D 
Sbjct: 1328 CRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDA 1387

Query: 358  ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            ITYNFLI+ HC+D  LE+A+K+LNS V+KGCN NAS+FN IF CISKLGDVN AHRM+ K
Sbjct: 1388 ITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAK 1446

Query: 418  MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
            MKDLKC PNTVTYNILM+MFA  KSTDMVLKL+KEM+ENE+EPN NTYR+LI+ +CG+GH
Sbjct: 1447 MKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 1506

Query: 478  WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            WNNAY + +EMIEEKCL+P   VYEMVLQQLR+AGQL+KHEELVEKMV+RGF  RPL
Sbjct: 1507 WNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 1563


>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/537 (69%), Positives = 441/537 (82%), Gaps = 10/537 (1%)

Query: 1   MALIKS--NHRLPFSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEETL 58
           MA IKS  N  L  SLS  +P  +   SS   ++E D  D     N++P    LSPE+T 
Sbjct: 1   MAFIKSRVNFHLHHSLSPFLPHTFRLCSSSPLVSEHDTND----NNTTPQNTNLSPEDTH 56

Query: 59  ISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEK 118
           I +KFH++IKDH+RKNPNP++ S PSLN   +IP LS+ FS+IST +S+SPS  R  IEK
Sbjct: 57  IVDKFHTIIKDHYRKNPNPNAVS-PSLN--LSIPDLSIEFSKISTVYSVSPSITRRAIEK 113

Query: 119 SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN 178
             GVRHGIP LQ L+FFNW T    F  SP+ Y+EMI+LAGK+R FDLAWH IDLMKSR 
Sbjct: 114 CSGVRHGIPFLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRG 173

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           V ITV TFS+LVRRYVRAGLAAEAVHAFNRME+YGC PDK++FSIVIS LC+KRRASEA+
Sbjct: 174 VRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAE 233

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
            FFDSLK KFEPDVIVYT+LV GWCRAG+I++AE VF +MK AG++PNVYTYSIVID+LC
Sbjct: 234 LFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLC 293

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           RCGQITRAHDVF+EM++ GC+PN++TFN+LMRVHVKA RTEKVLQVYNQMKRLGC ADTI
Sbjct: 294 RCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTI 353

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           +YNFLI+ HCKD  L++A+KVL++MV+KG  PNASTFN IF CI++L DVNGAHRMY KM
Sbjct: 354 SYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKM 413

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           K+LKC PNT+TYNILM+MFA SKS DMVLKLKKEM+E+EVEPNVNTYRILI M+C  GHW
Sbjct: 414 KELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHW 473

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA-RPL 534
           NNAY  ++EM+EEKCLKP  S+YE VL+ LR AGQL+KHEELVEKMV RGF + RPL
Sbjct: 474 NNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGFVSPRPL 530


>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
 gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/537 (69%), Positives = 432/537 (80%), Gaps = 6/537 (1%)

Query: 1   MALIKSNHRLP---FSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEET 57
           MALIKS   LP    SLS +I    SF SS +  +     D  T+   +   P LSPE+ 
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60

Query: 58  LISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIE 117
            +SEKFH+LIK+++R+NP P  +S P   P+FTI SLS   SQIS  HS+SP+ VR+VIE
Sbjct: 61  QVSEKFHALIKEYYRRNPGP--DSTPPC-PNFTISSLSNDLSQISAPHSVSPAVVRYVIE 117

Query: 118 KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
           KS  VRHGIP L  L+FFNW TA   F HSP  Y+EMI+LAGKV+QF LAW+ IDLMK+R
Sbjct: 118 KSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKAR 177

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           NVEITV TFS+LVRRYVRAGLAAEAVHAFNRME+YGC  D IAFS VISILC+KRRA EA
Sbjct: 178 NVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEA 237

Query: 238 QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           QSFFD+LK KFEPDVIVYT+LV GWCRAG+ISEAE VFREMKMAGI PNVYTYSIVIDAL
Sbjct: 238 QSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDAL 297

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           CR GQITRAHDVFAEML+ GC PNS+TFNNL+RVH++A RTEKVLQVYNQMKRL C AD 
Sbjct: 298 CRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADL 357

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           ITYNFLI+ HCKD  L +AIKVLNSM +  C PNAS+FN IFRCI+K  DVNGAHRM+ +
Sbjct: 358 ITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFAR 417

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           MK++ C+PNTVTYNILM+MFA  KS DM+ KLKKEM+E EVEPN NTYR LI +YCGMGH
Sbjct: 418 MKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGH 477

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           WN+AY + REMI+EKC+KP   +Y+MVL++LR+AGQL+KHEELV+KMV+RGF +R L
Sbjct: 478 WNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 534


>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Glycine max]
          Length = 564

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/537 (68%), Positives = 436/537 (81%), Gaps = 11/537 (2%)

Query: 1   MALIKSNHRLPFSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPF---LSPEET 57
           MA IK + R   SLS  +   +  +SS A          V   +  PDTP    LSPEET
Sbjct: 36  MAFIKPSARFRHSLSPLLSPTFKPYSSSA-------SALVPELDIQPDTPQNPNLSPEET 88

Query: 58  LISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIE 117
            +++KFH+ IK+HHR+NP P+ N+ P    + TIP LSL FS IS AH ISPS    VIE
Sbjct: 89  TLADKFHAAIKEHHRRNPTPNPNAPPPTP-NLTIPDLSLAFSAISAAHPISPSVAHRVIE 147

Query: 118 KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
           K  GVRHGIP LQ L+FFNW ++   F  SP+ Y+EM++LAGK+RQFDLAWH IDLMKSR
Sbjct: 148 KCGGVRHGIPFLQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSR 207

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
            VEITV TFS LVRRYVRAGLAAEAVHAFNRME+YGC PD +AFSIVIS LC+KRRA+EA
Sbjct: 208 GVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEA 267

Query: 238 QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           QSFFDSLK +FEPDV+VYT+LV GWCRAG+IS+AE VF +MKMAGI+PNVYTYSIVID+L
Sbjct: 268 QSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSL 327

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           CRCGQITRAHDVF+EM++ GC+PN++TFN+LMRVHVKA RTEKVL+VYNQMKRLGC ADT
Sbjct: 328 CRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADT 387

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           I+YNF+I+ HC+D  LE+A K+LN MV+KG  PNASTFN IF CI+KL DVNGAHRMY +
Sbjct: 388 ISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYAR 447

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           MK+L C+PNT+TYNILM+MFA S+STDMVLK+KKEM+E++VEPNVNTYRILI+M+C M H
Sbjct: 448 MKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKH 507

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           WNNAYK + EM+EEKCL+P  SVYE VL+ LR+AGQL+KHEELV+KMV RGF  RPL
Sbjct: 508 WNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARGFVTRPL 564


>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/538 (66%), Positives = 412/538 (76%), Gaps = 46/538 (8%)

Query: 1   MALIKSNHRLP---FSLSQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEET 57
           MAL+KS  RL    +SLS     ++  +SS +  +E++D   V    +S     LS EET
Sbjct: 1   MALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASEEEDE--VKESGNSAVNIVLSSEET 58

Query: 58  LISEKFHSLIKDHHRKNPNPSSNSNP-SLNPDFTIPSLSLGFSQISTAHSISPSTVRHVI 116
           L+ EKFHSLIK H RKN NP    +P S NP +TI SLS  FSQIS+A S+S + VR VI
Sbjct: 59  LVVEKFHSLIKSHQRKNTNP----DPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVI 114

Query: 117 EKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKS 176
           EK  GVRHGIP  Q L+FFNW T   EF HSP+ Y EMI+LAGK                
Sbjct: 115 EKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGK---------------- 158

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
                              AGLAAEAVHAFNRME+YGC PDKIAFS+VIS L +KRRA E
Sbjct: 159 -------------------AGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIE 199

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           AQSFFDSLKD+FEPDV+VYT+LV GWCRAGNISEAERVF EMKMAGIQPNVYTYSIVIDA
Sbjct: 200 AQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDA 259

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LCR GQITRAHDVF+EM++VGC+PN+ITFNNLMRVHVKA RTEKVLQVYNQMKRLGC  D
Sbjct: 260 LCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPD 319

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            ITYNFLI+ HC+D  LE+A+K+LNS V+KGCN NAS+FN IF CISKLGDVN AHRM+ 
Sbjct: 320 AITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFA 378

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           KMKDLKC PNTVTYNILM+MFA  KSTDMVLKL+KEM+ENE+EPN NTYR+LI+ +CG+G
Sbjct: 379 KMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIG 438

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           HWNNAY + +EMIEEKCL+P   VYEMVLQQLR+AGQL+KHEELVEKMV+RGF  RPL
Sbjct: 439 HWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 496


>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
 gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
          Length = 370

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 270/374 (72%), Positives = 313/374 (83%), Gaps = 9/374 (2%)

Query: 1   MALIKSNHRLPFSLSQQIPKAYS---FFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEET 57
           MAL+K+  R P SLS  + K +S     +S + L EDD  D   +   +P TP LSPEET
Sbjct: 1   MALLKTKLRFPHSLSPHLLKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTP-LSPEET 59

Query: 58  LISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQ-ISTAHSISPSTVRHVI 116
            ++EK HSLIKDH+R NPN +   +P+    +TIPSLSL FSQ IST HSISPS +RHVI
Sbjct: 60  FVAEKLHSLIKDHYRNNPNKTLPPDPT----YTIPSLSLDFSQTISTVHSISPSIIRHVI 115

Query: 117 EKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKS 176
           E+S GVRHGIP+ QVL+FFNW + +  F  SP+ ++EM++ AGKVR FDLAWH IDLMK+
Sbjct: 116 EQSGGVRHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKA 175

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R+VEITV+TFSIL+RRYVRAGLAAEA+HAFNRME+Y C PDKIAFSI+ISILCRKRRASE
Sbjct: 176 RDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASE 235

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           AQ FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF EMK+AGI+PNVYTYSIVID+
Sbjct: 236 AQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDS 295

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LCRCGQITRAHDVFAEML+ GC+PNSIT+N+LMR+HVKA RTEKVLQVYNQMKRLGCE D
Sbjct: 296 LCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPD 355

Query: 357 TITYNFLIDCHCKD 370
           T+TYNFLI+ HCKD
Sbjct: 356 TVTYNFLIETHCKD 369



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 116/237 (48%), Gaps = 3/237 (1%)

Query: 239 SFFD--SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           +FF+  S +D F+     +  +V    +      A  V   MK   ++  V T+SI++  
Sbjct: 132 AFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRR 191

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
             R G    A   F  M +  C+P+ I F+ L+ +  +  R  +  + ++ +K    E D
Sbjct: 192 YVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKD-KFEPD 250

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            I Y  L+   C+ G + +A +V   M   G  PN  T++++   + + G +  AH ++ 
Sbjct: 251 VIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFA 310

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +M D  C+PN++TYN LM++   +  T+ VL++  +M+    EP+  TY  LI  +C
Sbjct: 311 EMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHC 367



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 87/183 (47%), Gaps = 2/183 (1%)

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TF+ LMR +V+A    + +  +N+M+   C+ D I ++ LI   C+  +  +A +  +S+
Sbjct: 184 TFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSL 243

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             K   P+   +  + R   + G+++ A R++G+MK    +PN  TY+I++         
Sbjct: 244 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQI 302

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
                +  EM +   +PN  TY  L+ ++   G      +   +M    C +P +  Y  
Sbjct: 303 TRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGC-EPDTVTYNF 361

Query: 504 VLQ 506
           +++
Sbjct: 362 LIE 364



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 3/190 (1%)

Query: 340 KVLQVYNQMK-RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +VL  +N    + G +     +N ++D   K    + A  V++ M  +       TF+++
Sbjct: 129 QVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSIL 188

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
            R   + G    A   + +M+D  C+P+ + ++IL+ +    +      +    +++ + 
Sbjct: 189 MRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKD-KF 247

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP+V  Y  L+  +C  G+ + A +   EM +   +KP    Y +V+  L R GQ+ +  
Sbjct: 248 EPDVIVYTNLVRGWCRAGNISEAERVFGEM-KVAGIKPNVYTYSIVIDSLCRCGQITRAH 306

Query: 519 ELVEKMVDRG 528
           ++  +M+D G
Sbjct: 307 DVFAEMLDAG 316


>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Brachypodium distachyon]
          Length = 534

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/505 (46%), Positives = 330/505 (65%), Gaps = 14/505 (2%)

Query: 39  CVTNPNSSPDT-------PFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTI 91
           C T P + P T       P L+ EET + +   + + DH R +P     ++P  +P   +
Sbjct: 22  CTTEPFTEPITEPAPASPPPLTHEETKLVDSLQAALLDHRRAHPATPLPASPPFDP---L 78

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 151
           PSLS   + +  + + SP    HV  +   +R GIP  + L+FFN V         P+LY
Sbjct: 79  PSLSTTLTGLLPS-TPSPHLTFHVFGRLLALRRGIPFPEALAFFNHVLPSLPTDSLPELY 137

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
             M++L  K   F LA H +D M+ R++ I+      L+RRYVRAG+++EA   F  MEE
Sbjct: 138 ASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFRSMEE 197

Query: 212 YGCA-PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           YG   PD    + ++  L +KR ASEAQ+ FDS K  F PDV++YT LV  WCR+G + +
Sbjct: 198 YGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSVFTPDVVLYTTLVHAWCRSGCLDK 257

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           AE+VF EM+ AGI PNVYTY+ VIDA+ R GQ+ RA ++  +M++ GC PN+ TFN +MR
Sbjct: 258 AEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMR 317

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK--LEDAIKVLNSMVRKGC 388
            HVKA R+E+VLQV+NQM++LGC+ D ITYNFL++ HC  G+  L+ A+K+L  M+ KGC
Sbjct: 318 AHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGC 377

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  TFN + + +  LG+V+ AH++Y +M++L+C+PN +TYN+LM++F   KS DMVL+
Sbjct: 378 TPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLR 437

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +KK+M+   VEPNVNTY  LI  +CG G+W  AY  +REM+E K LKP   VY+MVL  L
Sbjct: 438 IKKDMDAQGVEPNVNTYGALIETFCGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLL 497

Query: 509 RRAGQLQKHEELVEKMVDRGFTARP 533
           R+AGQL+KHEELVE M DRGF  RP
Sbjct: 498 RKAGQLRKHEELVELMADRGFIKRP 522


>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
          Length = 544

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/485 (47%), Positives = 322/485 (66%), Gaps = 5/485 (1%)

Query: 52  LSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPST 111
           L+  ET + +  H+ + DHHR+    +     + + +  +P LS   S +  A   SP  
Sbjct: 51  LTTAETKLLDALHAALVDHHRRAHPAAPVPATAPS-EPPLPELSSALSGL-LASPPSPQL 108

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
              ++ +   +R G+PL + ++FF+ V         P LY  MI+L  K   F LA H +
Sbjct: 109 PLGLLRRLLALRRGVPLPEAVAFFHHVLPSLPPDSLPALYAAMIDLLAKHHHFPLARHLL 168

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC-APDKIAFSIVISILCR 230
           D M+ R+V I+      L+RRYVRA + +EA   F RMEEYG  APD    + ++  L +
Sbjct: 169 DEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSK 228

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           KR ASEAQ+ FDS K  F PDV++YT LV  WCR+G + EAERVF EM+ AG+ PNVYTY
Sbjct: 229 KRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTY 288

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + VIDA+ R GQ+ RA ++  +M++ GC PN+ TFN +MR HVKA R+E+VLQV+NQM++
Sbjct: 289 TAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQ 348

Query: 351 LGCEADTITYNFLIDCHCKDGK--LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           LGCE D ITYNFL++ HC  G+  L+ A+K+L  M+ KGC P+  TFN + + +  LG+V
Sbjct: 349 LGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNV 408

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           N A ++Y +M++L+C+PN VTYN+LM++F   KS DMVL++K++M+   VEPNVNTY  L
Sbjct: 409 NAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAAL 468

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +CG G+W  A+  +REM+EEK LKP   VY+MVL  LR+AGQL++HEELVE MVDRG
Sbjct: 469 IEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVEMMVDRG 528

Query: 529 FTARP 533
           F +RP
Sbjct: 529 FISRP 533


>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
 gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
           Group]
 gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
 gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
 gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 543

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/485 (47%), Positives = 321/485 (66%), Gaps = 6/485 (1%)

Query: 52  LSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPST 111
           L+  ET + +  H+ + DH R +P     +     P   +P LS   S +  A   SP  
Sbjct: 51  LTTAETKLLDALHAALVDHRRAHPAAPVPATAPSEP--PLPELSSALSGL-LASPPSPQL 107

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
              ++ +   +R G+PL + ++FF+ V         P LY  MI+L  K   F LA H +
Sbjct: 108 PLGLLRRLLALRRGVPLPEAVAFFHHVLPSLPPDSLPALYAAMIDLLAKHHHFPLARHLL 167

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC-APDKIAFSIVISILCR 230
           D M+ R+V I+      L+RRYVRA + +EA   F RMEEYG  APD    + ++  L +
Sbjct: 168 DEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSK 227

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           KR ASEAQ+ FDS K  F PDV++YT LV  WCR+G ++EAERVF EM+ AG+ PNVYTY
Sbjct: 228 KRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTY 287

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + VIDA+ R GQ+ RA ++  +M++ GC PN+ TFN +MR HVKA R+E+VLQV+NQM++
Sbjct: 288 TAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQ 347

Query: 351 LGCEADTITYNFLIDCHCKDGK--LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           LGCE D ITYNFL++ HC  G+  L+ A+K+L  M+ KGC P+  TFN + + +  LG+V
Sbjct: 348 LGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNV 407

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           N A ++Y +M++L+C+PN VTYN+LM++F   KS DMVL++KK+M+   VEPNVNTY  L
Sbjct: 408 NAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAAL 467

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +CG G+W  A+  +REM+EEK LKP   VY+MVL  LR+AGQL++HEELVE MVDRG
Sbjct: 468 IEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVEMMVDRG 527

Query: 529 FTARP 533
           F +RP
Sbjct: 528 FISRP 532


>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 539

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/485 (46%), Positives = 318/485 (65%), Gaps = 7/485 (1%)

Query: 52  LSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPST 111
           L+P E  + +  H+ I DH R +P+ +  S+P   P   +P+ S   + +  +   +P  
Sbjct: 47  LTPAEAKLLDSLHAAILDHSRAHPSTALPSSPPFEP---LPAFSSTLAGLLPSPP-APHL 102

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
              ++ +   +R G+P  + L+FF+ V         P LY  MI+L  K   F LA H +
Sbjct: 103 ALQLLGRLLALRRGVPFPEALTFFHHVVPSLPADSLPALYAAMIDLLAKHHHFPLARHLL 162

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA-PDKIAFSIVISILCR 230
           D M+ R++ ++      ++RRYVRAG++ EA   F RMEEYG   PD    + ++  L +
Sbjct: 163 DEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSK 222

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           KR A EAQ+ FDS K  F PDV++YT LV  WCRAG + +AE+VF EM+ AGI PNVYTY
Sbjct: 223 KRLAGEAQALFDSYKSVFPPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTY 282

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + VIDA+ R GQ+ RA ++  +M+E GC PN+ TFN +MR HVKA R+E+VLQV+NQM++
Sbjct: 283 TSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQ 342

Query: 351 LGCEADTITYNFLIDCHCKDGK--LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           LGC+ D ITYNFL++ HC  G+  L+ A+KVL  M+ KGC P+  TFN + + +   G+V
Sbjct: 343 LGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNV 402

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A R+Y +M++L+C+PN VTYN+LM++F   KS DMVL++KK+M+   VEPNVNTY  L
Sbjct: 403 EAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGAL 462

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +CG G+W  A+  +REM+EEK LKP   VY+MVL  LR+AGQL+KHEELVE M DRG
Sbjct: 463 IESFCGRGNWRRAHATLREMVEEKSLKPTKPVYDMVLMLLRKAGQLRKHEELVELMADRG 522

Query: 529 FTARP 533
           F  RP
Sbjct: 523 FIKRP 527


>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
 gi|223943161|gb|ACN25664.1| unknown [Zea mays]
 gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
 gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
          Length = 535

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/496 (47%), Positives = 327/496 (65%), Gaps = 9/496 (1%)

Query: 41  TNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQ 100
           T  ++SP  P L+ ++T + +   + + DH R NP  +    PSL+   T+PSLS   S 
Sbjct: 34  TGTDTSP--PPLTRDDTKLVDALLAALLDHRRANPA-AELPVPSLS--NTLPSLSSAISD 88

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
           +  +         H++ +   +R G+PL + ++FF+ V+        PDLY  MI L  K
Sbjct: 89  LLPSPPPP-HLPLHLLLRLLALRRGVPLPEAVAFFHHVSPSLPADSLPDLYASMIVLLAK 147

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC-APDKI 219
            R F LA H +D M+ R V I+      L RRYVRA + +EA   F RMEEYG  APD  
Sbjct: 148 HRHFGLARHLLDEMRERAVPISRQLILALTRRYVRAEMPSEAADLFRRMEEYGAGAPDPA 207

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
             + +++ L +KR ASEAQ+ FDS +  F PDV++YT +V  WCRAG + EAERVF EM+
Sbjct: 208 TLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAGRLDEAERVFTEMQ 267

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
            +GI PNVYTY+ VIDA+ R GQ+ RA ++  +M++ GC PN+ TFN +MR HVKA R+E
Sbjct: 268 QSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTTTFNAIMRSHVKAGRSE 327

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK--LEDAIKVLNSMVRKGCNPNASTFNM 397
           +VLQV+NQM++L CE D ITYNFLI+ HC  G+  L+ A+KVL+ M  K C P+  TFN 
Sbjct: 328 QVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLDAALKVLDKMTAKKCVPDCHTFNP 387

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +FR +  LG++  AH++Y KM++L+C+PN VTYN L+++F   KS DMVL++KK+M+   
Sbjct: 388 MFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVLRMKKDMDAEG 447

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +EPN++TY  LI  +CG G+W  A+  ++EMIEEK  KP   V +MVL  LR+AGQL+KH
Sbjct: 448 IEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSFKPSKQVRDMVLVLLRKAGQLKKH 507

Query: 518 EELVEKMVDRGFTARP 533
           EELVE MVDRGF ++P
Sbjct: 508 EELVELMVDRGFISQP 523


>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
 gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
          Length = 535

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/465 (47%), Positives = 305/465 (65%), Gaps = 7/465 (1%)

Query: 72  RKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQV 131
           R NP      +P  +P   +PSLS   S +  +         H++ +   +R G+PL + 
Sbjct: 63  RANPTAELPVSPPFDP---LPSLSSTISDLLPSPPPP-HLPLHLLRRLLALRRGVPLPEA 118

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
            +FF  + A       PDLY  MI+L  K   F LA H +D M+ R V I+      L+R
Sbjct: 119 AAFFRHIAASLPADSLPDLYASMIDLLAKHHHFSLARHLLDEMRERAVPISSRLIFALIR 178

Query: 192 RYVRAGLAAEAVHAFNRMEEYGC-APDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RYVRA + +EA   F RMEEYG  AP+    + +++ L +KR ASEAQ+ FDS +  F P
Sbjct: 179 RYVRAEMPSEAADLFRRMEEYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVFTP 238

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           DV++YT +V  WCRAG + EAERVF EM+ +GI PNVYTY+ VIDA+ R GQ+ RA ++ 
Sbjct: 239 DVVLYTAVVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELL 298

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M++ GC PN+ TFN +MR HVKA R+E+VLQV+NQM +L CE D ITYNFLI+ HC  
Sbjct: 299 CQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGK 358

Query: 371 GK--LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           G+  L+ A+KVL+ M+ K C P+  TFN +FR +  LG++  AH++Y KM++L+C+PN V
Sbjct: 359 GQGNLDAALKVLDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVV 418

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TYN L+++F   KS DMVL++KK M+   +EPN++TY  LI  +CG G+W  A+  ++EM
Sbjct: 419 TYNCLLKLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEM 478

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           IEEK  KP   V +MVL  LR+AGQL+KHEELVE MVDRGF + P
Sbjct: 479 IEEKSFKPSKQVRDMVLVLLRKAGQLKKHEELVELMVDRGFISHP 523


>gi|224149567|ref|XP_002336830.1| predicted protein [Populus trichocarpa]
 gi|222836972|gb|EEE75365.1| predicted protein [Populus trichocarpa]
          Length = 252

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 140/209 (66%), Positives = 172/209 (82%), Gaps = 5/209 (2%)

Query: 52  LSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQI-STAHSISPS 110
           LSPE+TLI+EKFHSL+K+H+  NP  +    P  +P +TI SLSL FSQI ST  SISPS
Sbjct: 42  LSPEDTLIAEKFHSLMKEHYLSNPRKT----PPPDPTYTISSLSLDFSQIISTVRSISPS 97

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
            VRHVI +S  VRHGIP+ QVL+FFNW + +  F  SP+ Y+EM++ +G+V  FD+AW+F
Sbjct: 98  IVRHVIAQSSAVRHGIPVPQVLAFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYF 157

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           IDLMK+RNV++TV+TF IL+RRYVRAGLAAEA+HAFNRME+Y C PDKIAFSI+ISILCR
Sbjct: 158 IDLMKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCR 217

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLV 259
           +RRAS+AQ FFDSLKDKFE DV VYTNL+
Sbjct: 218 ERRASQAQEFFDSLKDKFELDVFVYTNLI 246



 Score = 39.7 bits (91), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 34/63 (53%)

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TF  LMR +V+A    + +  +N+M+   C+ D I ++ LI   C++ +   A +  +S+
Sbjct: 172 TFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSL 231

Query: 384 VRK 386
             K
Sbjct: 232 KDK 234


>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
 gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 242/436 (55%), Gaps = 8/436 (1%)

Query: 89  FTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSP 148
            T  +L+L  +   T   ISP     V+      R     +    FF W + +  +VHS 
Sbjct: 2   MTCHTLALETALDQTGIRISPEIAEPVLR-----RFENAGMLAYRFFEWASKQRNYVHSV 56

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
             YH MI    K+RQ+ + W  ++ M+++ + + V+ F I++R+Y RA    EAV+ FN 
Sbjct: 57  RAYHSMIESLAKIRQYQMVWDLVNAMRNKEI-LNVEAFCIIMRKYARAQKVEEAVYTFNV 115

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           ME+Y   P+  AF+ ++S LC+ +   +AQ  FD++KD+F PD   Y+ L+ GW RA N+
Sbjct: 116 MEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNL 175

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A  ++REM  +G  P+  TYSI++D LC+ G++  A ++  EM    C+P+S  ++ L
Sbjct: 176 PKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVL 235

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  +   +R E  +  + +M+R G  AD   YN LI   CK  K+++  +VL  M  KG 
Sbjct: 236 VHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGV 295

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           NPN+ T N+I   +   G+ + A +++ +M  + CEP+  +Y ++++MF   K  DM LK
Sbjct: 296 NPNSRTCNIIINSLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMFCGRKELDMALK 354

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + K M++ +  P+++T+ +LI   C +G+   A   + EMI EK ++P  + +  +   L
Sbjct: 355 IWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMI-EKGIRPSGATFGRLRHLL 413

Query: 509 RRAGQLQKHEELVEKM 524
            + G+    + L EKM
Sbjct: 414 IKEGRKDVLKFLQEKM 429



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 37/277 (13%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA------- 237
           T+SIL+  + RA    +A   +  M + GC PD++ +SI++ +LC+  R  EA       
Sbjct: 161 TYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEM 220

Query: 238 -----------------------------QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
                                         +F +  ++    DV  Y  L+  +C+A  +
Sbjct: 221 DYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKM 280

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
               RV ++M + G+ PN  T +I+I++L   G+   A  +F  M++V CEP+  ++  +
Sbjct: 281 KNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMI 339

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +++       +  L+++  MK+        T++ LI+  C+ G    A  +L  M+ KG 
Sbjct: 340 IKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGI 399

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            P+ +TF  +   + K G  +    +  KM  L  EP
Sbjct: 400 RPSGATFGRLRHLLIKEGRKDVLKFLQEKMNLLVKEP 436


>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 145/433 (33%), Positives = 236/433 (54%), Gaps = 8/433 (1%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 151
           P L L  S   +   +SP  V +V++     R     +    FF W   +  + HS   Y
Sbjct: 26  PKLELDTSLSESGIRVSPIVVENVLK-----RFENAGMLAYQFFEWAGKQRNYTHSIRAY 80

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
           H MI    K+RQ+ + W  ++ M+S  + + V+TF I++R+Y R+    EAV+ FN ME+
Sbjct: 81  HTMIESLAKIRQYQIMWDLVNKMRSLKI-LNVETFCIIMRKYARSQKVKEAVYTFNIMEK 139

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEA 271
           Y   P+  AF+ ++S LC+ +   +AQ  F+ +KD+F PD   Y+ L+ GW +A N+ +A
Sbjct: 140 YDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKAPNLPKA 199

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             +FREM   G  P++ TY I++D LC+ G++  A  +  EM    C+P S  ++ L+  
Sbjct: 200 REIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHT 259

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +   +R E  +  +  M+R   EAD   YN LI   CK  KL++A +VLN M  KG  PN
Sbjct: 260 YGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPN 319

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           + T N+I   +   GD + A R++ +M  + C+P+  TY ++++MF  +   +M LK+ K
Sbjct: 320 SRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWK 378

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M   +  P+++T+ +LI   C  G+ + A   + EMI EK ++P S  +  + Q L + 
Sbjct: 379 YMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMI-EKGIRPSSVTFGKLKQLLIKE 437

Query: 512 GQLQKHEELVEKM 524
           G+    E L EKM
Sbjct: 438 GREDVLEFLQEKM 450


>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 439

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 231/433 (53%), Gaps = 8/433 (1%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 151
           P+++L  +       +SP  V  V+      R     +    FF W   +  + HS   Y
Sbjct: 5   PAVTLHTALDQNGIRVSPEIVEDVLR-----RFENAGMVAYRFFEWAEKQLHYTHSVRAY 59

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
           H MI    K+RQ+ + W  I+ MK + + + V+TF I++R+Y RA    EAV+ FN ME+
Sbjct: 60  HTMIESLAKIRQYQIMWDLINAMKRKRM-LNVETFCIIMRKYARAQKLEEAVYTFNVMEK 118

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEA 271
           Y   P+  AF+ + S LC+ +   +AQ  FDS KD+F PD   YT L+ GW +  N+ +A
Sbjct: 119 YDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKA 178

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             +FREM   G  P++ TY I++D LC+ G++  A D+  EM    C+P S  ++ L+  
Sbjct: 179 REIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHT 238

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +   +R E  +  +  M++ G +AD   YN LI   CK  K ++  +VLN M  KG  PN
Sbjct: 239 YGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPN 298

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           + T N+I   +   G+ + A R++ +M  + CEP+  TY ++++MF      +M LK+ K
Sbjct: 299 SRTLNIILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKVWK 357

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M++    P+++T+ +LI   C  G  ++A   + +MI EK ++P    +  +   L + 
Sbjct: 358 YMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMI-EKGIRPSGVTFGRLRHLLIKE 416

Query: 512 GQLQKHEELVEKM 524
           G+    E L +K+
Sbjct: 417 GREDVLEFLQQKI 429



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 37/277 (13%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA------- 237
           T++IL+  + +     +A   F  M + GC+PD + + I++ ILC+  R  EA       
Sbjct: 161 TYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEM 220

Query: 238 -----------------------------QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
                                         +F    K+  + DV  Y  L+  +C+    
Sbjct: 221 DLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKF 280

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
               RV  EM   G+QPN  T +I+++ L   G+   A  VF  M++V CEP++ T+  +
Sbjct: 281 KNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMM 339

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +++  + +  E  L+V+  MK+        T++ LI+  C++G +  A  +L  M+ KG 
Sbjct: 340 IKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGI 399

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            P+  TF  +   + K G  +    +  K+  L  EP
Sbjct: 400 RPSGVTFGRLRHLLIKEGREDVLEFLQQKINVLIKEP 436


>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 461

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 231/436 (52%), Gaps = 8/436 (1%)

Query: 89  FTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSP 148
            T P+L L  +   T   +SP  V +V+++      G+P  +   FF W   +  + HS 
Sbjct: 24  MTCPTLGLDTALNQTGVRVSPDLVENVLKRFENA--GMPAFR---FFEWAEKQRGYSHSI 78

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
             YH MI    K+RQ+ + W  +  M+ + + + V+TF I++R+Y RA    EAV+ FN 
Sbjct: 79  RAYHLMIESLAKIRQYQIVWDLVSAMRKKGM-LNVETFCIMMRKYARANKVDEAVYTFNV 137

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           M++Y   P+  AF+ ++S LC+     +AQ  FD++K +F PD   Y+ L+ GW +A N+
Sbjct: 138 MDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNL 197

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  VFREM  AG  P+V TY I++D LC+ G++  A +V  EM    C P S  ++ L
Sbjct: 198 PRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVL 257

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  +    R E  +  + +M + G +AD + YN LI   CK  K ++  +VL  M   G 
Sbjct: 258 VHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGV 317

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN+ T N+I   +   G  + A R++ +M  L CEP+  TY ++++MF      +M LK
Sbjct: 318 APNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALK 376

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + K M+  +  P+++T+  LI   C   +   A   + EMI EK ++P    +  + Q L
Sbjct: 377 IWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMI-EKGIRPSRITFGRLRQLL 435

Query: 509 RRAGQLQKHEELVEKM 524
            + G+    + L EKM
Sbjct: 436 IKEGREDVLKFLHEKM 451



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 2/286 (0%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           + +FV     Y  ++   GK      A      M     +  V T+ I+V    +AG   
Sbjct: 174 KGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVD 233

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLV 259
           EAV     M+   C P    +S+++     + R  +A  +F +  K   + DV+ Y  L+
Sbjct: 234 EAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALI 293

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             +C+        RV +EM+  G+ PN  T +++I ++   GQ  RA  VF  M+++ CE
Sbjct: 294 GAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL-CE 352

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P++ T+  ++++  + +  E  L+++  MK         T++ LI   C+      A  V
Sbjct: 353 PDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVV 412

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           +  M+ KG  P+  TF  + + + K G  +    ++ KM  L  EP
Sbjct: 413 MEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEP 458



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 13/251 (5%)

Query: 113 RHVIEKSCG---VRHGIPLLQVLSFFNWVTARPEFVHSPD---------LYHEMINLAGK 160
           R ++E  C    V +GI ++ VL     V    E V   D         +Y  +++  G 
Sbjct: 205 REMVEAGCDPDVVTYGI-MVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGV 263

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
             + + A      M  + ++  V  ++ L+  + +             ME  G AP+   
Sbjct: 264 EHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRT 323

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
            +++IS +  + +   A   F  +    EPD   YT +++ +C    +  A ++++ MK 
Sbjct: 324 CNVIISSMIGQGQTDRAFRVFCRMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKS 383

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
               P+++T+S +I  LC      +A  V  EM+E G  P+ ITF  L ++ +K  R + 
Sbjct: 384 KQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDV 443

Query: 341 VLQVYNQMKRL 351
           +  ++ +M  L
Sbjct: 444 LKFLHEKMNLL 454


>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
 gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
          Length = 440

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 214/380 (56%), Gaps = 3/380 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +  + HS   +H +I+   K+RQ+ L W  + +MKS+ + + V+TF I++R+Y
Sbjct: 42  FFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRM-VNVETFCIIMRKY 100

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
            RA    EAV+ FN M++Y   P+  AF+ ++S LC+ +   +AQ  FDS+KD+F PD  
Sbjct: 101 ARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSK 160

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y+ L+ GW +  N+ +A  +FREM   G +P++ TY I++D LC+ G++  A  +  EM
Sbjct: 161 TYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEM 220

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
               C+P    ++ L+  +   +R E  +  + +M+  G E D   YN LI   CK  +L
Sbjct: 221 DSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRL 280

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           ++  +VLN M  KG  PN+ TFN+I   +   G+ + A+R++ +M  + CEP+  TY ++
Sbjct: 281 KNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKV-CEPDADTYTMM 339

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++MF         LK+ K M+     P+++T+++LI   C  G    A   + EMI EK 
Sbjct: 340 IKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMI-EKG 398

Query: 494 LKPGSSVYEMVLQQLRRAGQ 513
           ++P    +  + Q L + G+
Sbjct: 399 IRPSGVTFGRLRQLLIKEGR 418



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 1/197 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P +Y  +++  G   + + A      M++  +E  V  ++ L+  + +A          
Sbjct: 228 TPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVL 287

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
           N M+  G  P+   F+I++S L  +    EA   F  +    EPD   YT +++ +C   
Sbjct: 288 NEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERD 347

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            + +A +V++ MK+    P+++T+ ++I+ LC  G +T+A  +  EM+E G  P+ +TF 
Sbjct: 348 ELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFG 407

Query: 327 NLMRVHVKASRTEKVLQ 343
            L ++ +K  R E VL+
Sbjct: 408 RLRQLLIKEGR-EDVLK 423


>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
 gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
 gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
          Length = 489

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 221/393 (56%), Gaps = 5/393 (1%)

Query: 134 FFNWVTARPEFV--HSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           FF W   +   V  H+   YH ++    K+RQ+ L W  + +M+   V   V+TF I++R
Sbjct: 90  FFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGVA-NVETFGIIMR 148

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           +Y RA    EAV+ FN ME+YG A +  AF+ ++S LC+ +   +AQ  FD + ++F PD
Sbjct: 149 KYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPD 208

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              Y+ L+ GW RA ++ +   V+ +M  AG QP++ TY I++DALC+ G++  A  V  
Sbjct: 209 AKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQ 268

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           +M   GC+P +  ++ L+  +    R E  +  +  M++ G   D + YN LI   CK  
Sbjct: 269 DMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVK 328

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           K E+A +V++ M   G +PN+ T+N+I   +  LG  + A+R++  M   +C+P++ TY 
Sbjct: 329 KFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIK-RCKPDSDTYT 387

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           ++++MF  +   +M LK+ K M   +  P+++T+ +LI   C  G  + A   + +MI E
Sbjct: 388 MMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMI-E 446

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           K ++P  S +  + Q L + G+    + LVEKM
Sbjct: 447 KGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKM 479



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 37/244 (15%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  M++   K  + + A   +  M SR  + T   +SILV  Y       +AV A
Sbjct: 242 PDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAA 301

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRR-------------------------------- 233
           F  ME+ G  PD + ++ +I+  C+ ++                                
Sbjct: 302 FLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLIS 361

Query: 234 ---ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
                EA   F S+  + +PD   YT +++ +C    I  A +V++ M++    P+++T+
Sbjct: 362 LGKDDEAYRVFRSMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTF 421

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           S++I+ LC  G++++A  +  +M+E G  P   TF  L ++ +K  R + +  +  +MK 
Sbjct: 422 SVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKI 481

Query: 351 LGCE 354
           L  E
Sbjct: 482 LAQE 485


>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 486

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 220/393 (55%), Gaps = 5/393 (1%)

Query: 134 FFNWV--TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           FF W     R    H+   YH ++    K+RQ+ L W  + +M+   V + V+TF I++R
Sbjct: 87  FFEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREGV-VNVETFGIIMR 145

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           +Y RA    EAV+ FN ME+YG  P+  AF+ ++  LC+ +   +AQ  FD +  +F PD
Sbjct: 146 KYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPD 205

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              Y+ L+ GW +A N+ +   V+ EM  AG QP++ TY I++D+LC+ G++  A  V  
Sbjct: 206 AKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQ 265

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           +M   GC+P +  ++ L+  +    R E  +  +  M++ G   D + YN L+   CK  
Sbjct: 266 DMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVK 325

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           K E+A +V++ M   G  PN+ T+N+I   +  LG  + A+R++ +M   +C+P++ TY 
Sbjct: 326 KFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIK-RCQPDSDTYT 384

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           ++++MF  + + +M LK+ K M   +  P+++T+ +LI   C  G  + A   + +MI E
Sbjct: 385 MMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMI-E 443

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           K ++P  S +  + Q L + G+    E LV+KM
Sbjct: 444 KGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKM 476



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 107/203 (52%), Gaps = 2/203 (0%)

Query: 150 LYHEMINLAG-KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           +Y  +++  G ++R  D    F+D+ K   V   V  ++ LV  + +      A    + 
Sbjct: 278 IYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVV-VYNALVTAFCKVKKFENAFRVMDD 336

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           ME +G AP+   ++I+++ L    +  EA   F  +  + +PD   YT +++ +C   N+
Sbjct: 337 MEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDNV 396

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A +V++ M++    P+++T+S++I+ LC  G++++A  +  +M+E G  P   TF  L
Sbjct: 397 EMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 456

Query: 329 MRVHVKASRTEKVLQVYNQMKRL 351
            ++ +K  R + +  + ++MK L
Sbjct: 457 RQLLLKEGRKDVLEFLVDKMKIL 479


>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
 gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
          Length = 487

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 219/393 (55%), Gaps = 5/393 (1%)

Query: 134 FFNWV--TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           FF W     R    H+   YH ++    K+RQ+ L W  + +M+   V   V+TFSI++R
Sbjct: 88  FFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEGVA-NVETFSIIMR 146

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           +Y RA    EAV+ FN ME YG A +  AF+ ++  LC+ +   +AQ  FD + ++F PD
Sbjct: 147 KYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNRFSPD 206

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              Y+ L+ GW RA N+ +   V+ +M  AG QP++ TY I++DALC+ G++  A  V  
Sbjct: 207 AKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQ 266

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           +M   GC+P +  ++ L+  +    R E  +  +  M++ G   D + YN L+   CK  
Sbjct: 267 DMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVK 326

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           K ++A +V++ M   G +PN+ T+N+I   +  LG  + A+R++  M   +C+P++ TY 
Sbjct: 327 KFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIK-RCKPDSDTYT 385

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           ++++MF  +   +M LK+ K M   +  P+++T+ +LI   C  G  + A   + +MI E
Sbjct: 386 MMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMI-E 444

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           K ++P  S +  + Q L + G+    + LVEKM
Sbjct: 445 KGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKM 477



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 105/203 (51%), Gaps = 2/203 (0%)

Query: 150 LYHEMINLAG-KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           +Y  +++  G  +R  D    F+D+ K   V   V  ++ LV  + +      A    + 
Sbjct: 279 IYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVV-VYNALVTAFCKVKKFDNAFRVMDD 337

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           ME +G +P+   ++I+++ L    +  EA   F ++  + +PD   YT +++ +C    I
Sbjct: 338 MEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKRCKPDSDTYTMMIKMFCENDKI 397

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A +V++ M++    P+++T+S++I+ LC  G++++A  +  +M+E G  P   TF  L
Sbjct: 398 EMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 457

Query: 329 MRVHVKASRTEKVLQVYNQMKRL 351
            ++ +K  R + +  +  +MK L
Sbjct: 458 RQLLLKEGRKDVLDFLVEKMKML 480


>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 485

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 233/431 (54%), Gaps = 14/431 (3%)

Query: 100 QISTAHS---ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEF---VHSPDLYHE 153
           +I   HS   ++P     V+E     R     +    FF W   +       H+   +H 
Sbjct: 53  EIELDHSDLRVTPDVAERVLE-----RLDNAGMLAYRFFEWARKQRRGGGCAHTVRSFHT 107

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++    K+RQ+ L W  + +M+ + V + V+TF I++R+Y RA    EAV+ FN ME+YG
Sbjct: 108 VVASLAKIRQYQLMWDVVAIMRRQGV-VNVETFGIIMRKYARAQKVDEAVYTFNVMEKYG 166

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAER 273
             P+  AF+ ++  LC+ +   +AQ  F+ +  +F PD   Y+ L+ GW RA N+ +  +
Sbjct: 167 VVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAPNLPKMRK 226

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           V+ +M  AG QP++ TY I++D+LC+ G++  A  V  +M   GC+P +  ++ L+  + 
Sbjct: 227 VYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYG 286

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
              R E  +  +  M++ G   D + YN L+   CK  K ++A +V++ M   G  PN+ 
Sbjct: 287 VEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSR 346

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T+N+I   +  LG  + A+R++ +M   +C+P++ TY ++++MF  +   +M LK+ K M
Sbjct: 347 TWNIILNKLISLGKDDEAYRVFRRMIK-RCQPDSDTYTMMIKMFCENDRLEMALKVWKYM 405

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
              +  P+++T+ +LI   C  G  + A   + +MI EK ++P  S +  + Q L + G+
Sbjct: 406 RLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMI-EKGIRPPGSTFGKLRQLLLKEGR 464

Query: 514 LQKHEELVEKM 524
               E LV+KM
Sbjct: 465 KDVLEFLVDKM 475



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 105/203 (51%), Gaps = 2/203 (0%)

Query: 150 LYHEMINLAG-KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           +Y  +++  G ++R  D    F+D+ K   V   V  ++ LV  + +      A    + 
Sbjct: 277 IYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVV-VYNALVTAFCKVKKFDNAFRVMDD 335

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           ME +G  P+   ++I+++ L    +  EA   F  +  + +PD   YT +++ +C    +
Sbjct: 336 MEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDRL 395

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A +V++ M++    P+++T+S++I+ LC  G++++A  +  +M+E G  P   TF  L
Sbjct: 396 EMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 455

Query: 329 MRVHVKASRTEKVLQVYNQMKRL 351
            ++ +K  R + +  + ++MK L
Sbjct: 456 RQLLLKEGRKDVLEFLVDKMKIL 478


>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 482

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 232/433 (53%), Gaps = 8/433 (1%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 151
           P L +  +   +   +SP  V  V+      R     L    FF W   +  + HS   Y
Sbjct: 48  PQLVIDSALDQSGLRVSPEVVEDVL-----YRFRNAGLLAYRFFQWSEKQRHYEHSVRAY 102

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
           H MI    K+RQ+ L W  I+ M  + + + V+TF I++R+Y RA    EA++AFN ME+
Sbjct: 103 HMMIESTAKIRQYKLMWDLINAMMKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEK 161

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEA 271
           Y   P+ +AF+ ++S LC+ +   +AQ  F++++D+F PD   Y+ L+ GW +  N+ +A
Sbjct: 162 YDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKA 221

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             VFREM  AG  P++ TYSI++D LC+ G++  A  +   M    C+P +  ++ L+  
Sbjct: 222 REVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHT 281

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +   +R E+ +  + +M+R G +AD   +N LI   CK  ++++  +VL  M  KG  PN
Sbjct: 282 YGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPN 341

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           + + N+I R +   G+ + A  ++ KM  + CEP+  TY ++++MF   K  +   K+ K
Sbjct: 342 SKSCNIILRHLIDRGEKDEAFDVFRKMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWK 400

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M +  V P+++T+ +LI   C   +   A   + EMI E  ++P  + +  + Q L + 
Sbjct: 401 YMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMI-EMGIRPSGATFGRLRQLLLKE 459

Query: 512 GQLQKHEELVEKM 524
            +    + L EKM
Sbjct: 460 DREDVLKFLNEKM 472


>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
 gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
 gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
 gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
 gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
          Length = 484

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 215/393 (54%), Gaps = 5/393 (1%)

Query: 134 FFNWV--TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           FF W     R    H+   YH ++    K+RQ+ L W  + +M+ R   + V+TF I++R
Sbjct: 85  FFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMR-REGAVNVETFGIIMR 143

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           +Y RA    EAV+ FN ME+YG  P+  AF+ ++  LC+ +   +AQ  FD +  +F PD
Sbjct: 144 KYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPD 203

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              Y+ L+ GW RA N+ +   V+ EM  AG +P++ TY I++D+LC+ G++  A  V  
Sbjct: 204 AKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQ 263

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           +M   GC+P +  ++ L+  +    R E  +  +  M++ G   D + YN L+   CK  
Sbjct: 264 DMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAK 323

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           K E+A +VLN M   G   N+ T+N+I   +  LG  + A++++ +M    C+P+  TY 
Sbjct: 324 KFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYT 382

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           ++++MF  +   +M LK+ K M   +  P+++T+ +LI   C     + A   + +MI E
Sbjct: 383 MMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMI-E 441

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           K ++P  S +  + Q L + G+    + LVEKM
Sbjct: 442 KGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKM 474


>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 205/357 (57%), Gaps = 2/357 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +  + HS   YH MI    K+RQ+ L W  I+ M+ + + + V+TF I++R+Y
Sbjct: 84  FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKY 142

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
            RA    EA++AFN ME+Y   P+ +AF+ ++S LC+ +   +AQ  F++++D+F PD  
Sbjct: 143 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 202

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y+ L+ GW +  N+ +A  VFREM  AG  P++ TYSI++D LC+ G++  A  +   M
Sbjct: 203 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 262

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
               C+P +  ++ L+  +   +R E+ +  + +M+R G +AD   +N LI   CK  ++
Sbjct: 263 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 322

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           ++  +VL  M  KG  PN+ + N+I R + + G+ + A  ++ KM  + CEP+  TY ++
Sbjct: 323 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMV 381

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           ++MF   K  +   K+ K M +  V P+++T+ +LI   C       A   + EMIE
Sbjct: 382 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 438


>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial; Flags: Precursor
 gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 220/396 (55%), Gaps = 3/396 (0%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L    FF W   +  + HS   YH MI    K+RQ+ L W  I+ M+ + + + V+TF I
Sbjct: 115 LLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCI 173

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R+Y RA    EA++AFN ME+Y   P+ +AF+ ++S LC+ +   +AQ  F++++D+F
Sbjct: 174 VMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF 233

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD   Y+ L+ GW +  N+ +A  VFREM  AG  P++ TYSI++D LC+ G++  A  
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +   M    C+P +  ++ L+  +   +R E+ +  + +M+R G +AD   +N LI   C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  ++++  +VL  M  KG  PN+ + N+I R + + G+ + A  ++ KM  + CEP+  
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDAD 412

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY ++++MF   K  +   K+ K M +  V P+++T+ +LI   C       A   + EM
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           IE   ++P    +  + Q L +  +    + L EKM
Sbjct: 473 IEMG-IRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507


>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 512

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 221/421 (52%), Gaps = 15/421 (3%)

Query: 107 ISPSTVRHVIEK--SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           +SP+ +  V++K  + GV         LS F W   +  F H+   Y+ +I   GK++QF
Sbjct: 94  LSPALIEEVLKKLSNAGV-------LALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 146

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
            L W+ +D MK + + ++ DTF+++ RRY RA    EA+ AF++ME+YG   +   F+ +
Sbjct: 147 KLIWNLVDDMKQKKL-LSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRM 205

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           + IL + R   +AQ  FD +K K FEPD+  YT L+ GW +  N+     V+ EMK  G 
Sbjct: 206 LDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGF 265

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V  Y I+I+A C+  +   A   F EM +  C+P+   F +L+       +    L+
Sbjct: 266 EPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 325

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            + + K  G   +  TYN L+  +C   ++EDA K ++ M  KG  PNA T+++I   + 
Sbjct: 326 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLI 385

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           ++     A+ +Y KM    CEP   TY I+++MF   +  DM +K+  EM+   V P ++
Sbjct: 386 RMQRTKEAYEVYQKM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 442

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
            +  LIT  C     + A +Y  EM++     PG  ++  + Q L   G+  K  +L  K
Sbjct: 443 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPG-HLFSRLKQTLLDEGRKDKVADLAVK 501

Query: 524 M 524
           M
Sbjct: 502 M 502



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 9/225 (4%)

Query: 130 QVLSFFNWVTAR---PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           + + FFN +  R   P    SP ++  +IN  G  ++ + A  F +  KS    +   T+
Sbjct: 287 EAVRFFNEMEQRNCKP----SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 342

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + LV  Y  +    +A    + M   G  P+   + I++  L R +R  EA   +  +  
Sbjct: 343 NALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKMS- 401

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             EP V  Y  +VR +C    +  A +++ EMK  G+ P ++ +S +I ALC   ++  A
Sbjct: 402 -CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 460

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            + F EML+VG  P    F+ L +  +   R +KV  +  +M RL
Sbjct: 461 CEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAVKMDRL 505


>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 641

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 227/437 (51%), Gaps = 14/437 (3%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLS-----------FFNWVTARPEFVHSPDLYHE 153
           H+  P     + E    +R G+P  +VLS           FF W + +P + HS ++Y  
Sbjct: 88  HTRVPKLELALQESGVIMRSGLPE-RVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKA 146

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           MI   GK+RQF   W  I+ M+  N   +T + F +L+RR+    +  +AV   + M +Y
Sbjct: 147 MIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKY 206

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           GC PD+  F  ++  LC+     EA S F+ ++ +F P++  +T+L+ GWCR G I EA+
Sbjct: 207 GCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAK 266

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            V  ++K AG +P++  Y+ ++    + G++  A D+ AEM +V C PN+ +F  L++  
Sbjct: 267 HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSF 326

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K  + ++ ++++ +M+  GCEAD +TY  LI   CK G  + A ++L+ M++KG +P+ 
Sbjct: 327 CKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQ 386

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            ++  I     K  ++     +  +M+ + C P+   YN ++++          ++L  E
Sbjct: 387 LSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGE 446

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK-PGSSVYEMVLQQLRRA 511
           M+   + P ++TY +++  +   G    A  Y +EM+E   L  P     + +   L RA
Sbjct: 447 MQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRA 506

Query: 512 GQLQKHEELVEKMVDRG 528
            +L+  + +   M  +G
Sbjct: 507 EKLEMAKNMWSCMTTKG 523


>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 664

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 227/437 (51%), Gaps = 14/437 (3%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLS-----------FFNWVTARPEFVHSPDLYHE 153
           H+  P     + E    +R G+P  +VLS           FF W + +P + HS ++Y  
Sbjct: 111 HTRVPKLELALQESGVIMRSGLPE-RVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKA 169

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           MI   GK+RQF   W  I+ M+  N   +T + F +L+RR+    +  +AV   + M +Y
Sbjct: 170 MIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKY 229

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           GC PD+  F  ++  LC+     EA S F+ ++ +F P++  +T+L+ GWCR G I EA+
Sbjct: 230 GCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAK 289

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            V  ++K AG +P++  Y+ ++    + G++  A D+ AEM +V C PN+ +F  L++  
Sbjct: 290 HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSF 349

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K  + ++ ++++ +M+  GCEAD +TY  LI   CK G  + A ++L+ M++KG +P+ 
Sbjct: 350 CKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQ 409

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            ++  I     K  ++     +  +M+ + C P+   YN ++++          ++L  E
Sbjct: 410 LSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGE 469

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK-PGSSVYEMVLQQLRRA 511
           M+   + P ++TY +++  +   G    A  Y +EM+E   L  P     + +   L RA
Sbjct: 470 MQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRA 529

Query: 512 GQLQKHEELVEKMVDRG 528
            +L+  + +   M  +G
Sbjct: 530 EKLEMAKNMWSCMTTKG 546


>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Cucumis sativus]
 gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Cucumis sativus]
          Length = 506

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 217/407 (53%), Gaps = 21/407 (5%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           LSFF++  + P    S   Y+ ++++  KVRQFD AWH I  M  +      DTF +L+R
Sbjct: 86  LSFFDYANSLPSNPISTTSYNILLDILAKVRQFDAAWHLILQMDHKGT----DTFLLLIR 141

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIA---FSIVISILCRKRRASEAQSFFDSLKDKF 248
           R + +G   +A+ AF+ +E  G   +K+    F  ++ +LC+      A   F+  K++F
Sbjct: 142 RLISSGRTRQAIRAFDDIE--GLTGNKVGIDDFCYLLDVLCKYGYVKVAVEVFNKRKEEF 199

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ------ 302
             DV +YT L+ GWC+ G    AER  ++M   GI+PNV TY+++++ +CR         
Sbjct: 200 GVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGR 259

Query: 303 ----ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
               I  A  VF EM + G EP+  +F+ ++ V+ +A + E  L    QMK LG      
Sbjct: 260 FEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVA 319

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  +I C C  G+LED   ++  MVR G +P+ +T+N  F+      D  GA R+Y KM
Sbjct: 320 TYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKM 379

Query: 419 K-DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           + D  C P+  TYNIL+ +F      + + +L  +M+E+ V P++++Y  +I   C    
Sbjct: 380 REDCLCAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQR 439

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           W+ A ++  EMIE   L P    +EM+ + L ++  L+    L +K+
Sbjct: 440 WSEACQFFVEMIERGFL-PQKVTFEMLYRGLIQSDMLRTWRRLKKKL 485



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 121/256 (47%), Gaps = 17/256 (6%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +Y+I++D L +  Q   A  +  +M   G +    TF  L+R  + + RT + ++ ++ +
Sbjct: 104 SYNILLDILAKVRQFDAAWHLILQMDHKGTD----TFLLLIRRLISSGRTRQAIRAFDDI 159

Query: 349 KRL-GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           + L G +     + +L+D  CK G ++ A++V N   ++    +   + ++     K+G 
Sbjct: 160 EGLTGNKVGIDDFCYLLDVLCKYGYVKVAVEVFNKR-KEEFGVDVKIYTILIYGWCKIGR 218

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT----------SKSTDMVLKLKKEMEENE 457
              A R    M +   EPN VTYN+L+                K+     K+  EM +  
Sbjct: 219 FEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRG 278

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +EP+V ++ I++ +Y        +   +++M +E  + P  + Y  V++ L   G+L+  
Sbjct: 279 IEPDVTSFSIVLHVYSRAHKPELSLDKLKQM-KELGISPTVATYTSVIKCLCSCGRLEDG 337

Query: 518 EELVEKMVDRGFTARP 533
           E L+E+MV  G +  P
Sbjct: 338 ENLIEEMVRSGISPSP 353


>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
 gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
          Length = 523

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 215/397 (54%), Gaps = 4/397 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF-IDLMKSRNVEITVDTFSILVRR 192
           FF W    P F HS + YH ++N+ G  RQF + W F I++ +S + EI  +   ++ R 
Sbjct: 98  FFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRS 157

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
           Y RA L ++A+ AF+RM E+G  P       ++ +LC+ +    AQ FFD +K KFE   
Sbjct: 158 YSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKA 217

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             Y+ LVRGW   G   EA +VF EM+  G   +V  Y+ +++ALC+ G +  A+ +F E
Sbjct: 218 KTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFRE 277

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           +   G EP++ ++   +R + +A+    V  V ++MKR     +  TYN +I   CK+GK
Sbjct: 278 IGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGK 337

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +EDA ++L+ M+ +G +P+A ++N I     +  +VN A ++   M    C P+  +YN+
Sbjct: 338 VEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNM 397

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC-GMGHWNNAYKYIREMIEE 491
           L+++       D   ++ + M E    P+V+TY ++I   C   G    A +Y   MI+E
Sbjct: 398 LLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDE 457

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + P +S  EM+  +L   G L   E L  KM +RG
Sbjct: 458 G-IPPYASTIEMLRNRLIGFGLLDHIEILACKM-ERG 492



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 160/337 (47%), Gaps = 12/337 (3%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDV 252
           R  L A+ +  F   EE        ++ I+++IL   R+ +    F   +++   FE + 
Sbjct: 97  RFFLWAKRIPGFEHSEE--------SYHILVNILGTSRQFAILWDFLIEMRESHDFEINQ 148

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
            +   + R + RA   S+A R F  M   G++P+V     ++  LC+C  +  A   F +
Sbjct: 149 EIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFF-D 207

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
            ++   E  + T++ L+R         +  +V+++M+  GC  D + YN L++  CK G 
Sbjct: 208 RVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGN 267

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +++A K+   +   G  P+A ++ +  R   +  +++    +  +MK     PN  TYN 
Sbjct: 268 VDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNC 327

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           +++    +   +   +L  EM E  V P+  +Y  ++  +C     N A K I  M+++ 
Sbjct: 328 IIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDN 387

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           CL P    Y M+L+ L R G+  +  E+ E M +RGF
Sbjct: 388 CL-PDRHSYNMLLKLLVRVGRFDRATEIWESMGERGF 423


>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 507

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 219/409 (53%), Gaps = 10/409 (2%)

Query: 107 ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           +SP  V  V+ K      GI     LSFF W   +  F H+ +++H +I   GK+RQF +
Sbjct: 84  VSPELVVAVLNKLSNA--GI---LALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKM 138

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            W+ +D MK R + +  DTFS++ RRYVRA +  EA+  F RME+YG  P    F+ +I 
Sbjct: 139 IWNLVDEMKQRKL-LNGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLID 197

Query: 227 ILCR-KRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           +LC+ K    +AQ  FD ++    EP++  YT L+ GW +  N+ + + V REMK  G Q
Sbjct: 198 VLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQ 257

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+V TY I+I+A C+  +   A  ++ +ML     P+   +   +      SR ++  + 
Sbjct: 258 PDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEF 317

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + + K  G   +  TYN ++  +C   +++DA +++  M   G  PNA T+++I   + K
Sbjct: 318 FEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIK 377

Query: 405 LGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
            G    A+ ++ +M  +  CEP+  TY I+++MF      DM + +  EM++  + P ++
Sbjct: 378 GGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIH 437

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
            +  LI   C     ++A +Y ++M++   ++P ++++    + L  AG
Sbjct: 438 MFSTLIISLCHENKLDDACRYFQQMLDVG-IRPTANMFSAFKRALMAAG 485



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 160/351 (45%), Gaps = 2/351 (0%)

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           VE++ +    ++ +   AG+ A +   +   ++ G   +   F  +I  L + R+     
Sbjct: 82  VEVSPELVVAVLNKLSNAGILALSFFRWAEKQQ-GFNHNTEIFHALIEALGKIRQFKMIW 140

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           +  D +K +   +   ++ + R + RA  I EA + F  M+  G++P +  ++ +ID LC
Sbjct: 141 NLVDEMKQRKLLNGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLC 200

Query: 299 RCG-QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           +    + +A ++F +M +   EPN  ++  L+    +     KV +V  +MK  G + D 
Sbjct: 201 KSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDV 260

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           +TY  +I+ +CK  K ++AI + + M+ K  NP+   +      +     ++ A   + K
Sbjct: 261 VTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEK 320

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
            K     P   TYN ++  +  S   D   ++  EM+E  + PN  TY I++      G 
Sbjct: 321 SKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGR 380

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              AY   + M  E   +P  S Y ++++      QL     +  +M D+G
Sbjct: 381 TKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKG 431



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 2/254 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK    +  V T+ I++  Y +A    EA+  ++ M      P    +   I+ L    R
Sbjct: 251 MKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSR 310

Query: 234 ASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  FF+  K   F P+   Y  +V  +C +  I +A R+  EMK  GI PN  TY I
Sbjct: 311 MDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDI 370

Query: 293 VIDALCRCGQITRAHDVFAEML-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           ++  L + G+   A+ VF  M  E GCEP+  T+  ++R+    ++ +  + V+N+MK  
Sbjct: 371 ILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDK 430

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G       ++ LI   C + KL+DA +    M+  G  P A+ F+   R +   G  N  
Sbjct: 431 GILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTV 490

Query: 412 HRMYGKMKDLKCEP 425
                K+  L+  P
Sbjct: 491 IHFAKKVDKLRNTP 504



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 2/207 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP +Y   I   G   + D A+ F +  K+        T++ +V  Y  +    +A    
Sbjct: 294 SPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIV 353

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCR 264
             M+E G  P+   + I++  L +  R  EA S F  +  +   EP V  Y  +VR +C 
Sbjct: 354 GEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCN 413

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +  A  V+ EMK  GI P ++ +S +I +LC   ++  A   F +ML+VG  P +  
Sbjct: 414 ENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANM 473

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRL 351
           F+   R  + A     V+    ++ +L
Sbjct: 474 FSAFKRALMAAGMENTVIHFAKKVDKL 500



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 29/145 (20%), Positives = 66/145 (45%), Gaps = 1/145 (0%)

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           ++G N N   F+ +   + K+        +  +MK  K   N  T++++ + +  +K   
Sbjct: 113 QQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARRYVRAKVIK 171

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             LK  + ME+  ++P ++ +  LI + C         + + + + +  L+P    Y ++
Sbjct: 172 EALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTIL 231

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           ++   +   L K +E+  +M D GF
Sbjct: 232 IEGWSQQQNLLKVDEVCREMKDDGF 256


>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 511

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 244/468 (52%), Gaps = 24/468 (5%)

Query: 78  SSNSNPSLNP--DFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQV---- 131
           S+ S PSL P  D  I S  +  +  +  H++  S   H I  S  + H   LL++    
Sbjct: 26  STFSLPSLEPSNDAEIVS-EILLNHHNPFHAMESSLQLHGITLSSSLLHQ-TLLRLRHNS 83

Query: 132 ---LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
              LSFF++  + P    +   Y+ +I++  KVRQFD++W  I  M   N++    TF I
Sbjct: 84  KIALSFFHYSLSLPSSSVNTTTYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFLI 143

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           L+RR + AG   +A+ AF+ ME +     ++  F  ++  LC+      A   F+  K +
Sbjct: 144 LIRRLISAGFTRQAIRAFDDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFR 203

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ----- 302
           F P+V +YT L+ GWC+ G I  AER  REM   GI+ NV TY++++D +CR  +     
Sbjct: 204 FLPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEG 263

Query: 303 -----ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
                I +A  VF EM + G EP+  +F+ L+ V+ +A + +  +     M+ +G     
Sbjct: 264 RFERTIMKADKVFDEMRQKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGICPTV 323

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TY  ++ C C  G+++DA ++L  MVR G +PNA+T+N  F+      D   A ++Y K
Sbjct: 324 ATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRK 383

Query: 418 MKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           ++    C+P+  TYNIL+ MF      ++V ++  ++  +   P++++Y +L+   C   
Sbjct: 384 IRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQ 443

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            W  A ++  EMI EK L P  + +EM+   L ++  L+    L +K+
Sbjct: 444 KWQKACQFFVEMI-EKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKL 490



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  TY+++ID L +  Q   +  +  +M +   +PNS TF  L+R  + A  T + ++ +
Sbjct: 102 NTTTYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAF 161

Query: 346 NQMKRLGCEADTIT-YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + M+    E    T + FL+D  CK G ++ A++V N    +   PN   + ++     K
Sbjct: 162 DDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFRFL-PNVRIYTVLIYGWCK 220

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILM-------QMFATSKSTDMVLKLKK---EME 454
           +G ++ A R   +M ++  E N VTYN+L+       ++    +    ++K  K   EM 
Sbjct: 221 IGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMR 280

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           +  +EP+V ++ IL+ +Y    H         +++EE  + P  + Y  VL+ L   G++
Sbjct: 281 QKGIEPDVTSFSILLHVY-SRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRI 339

Query: 515 QKHEELVEKMVDRGFT 530
              EEL+E+MV  G +
Sbjct: 340 DDAEELLEQMVRNGVS 355


>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 596

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 217/397 (54%), Gaps = 2/397 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRR 192
           FF W + +P + HS + Y  M+ +  K+RQF   W  ++ M+  N V IT + F +L+RR
Sbjct: 126 FFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRR 185

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
           +  A L  +A+   + M +YGC PD+  F  ++  LC+     +A S F+ ++ +F P +
Sbjct: 186 FASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVRFSPSL 245

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +T+L+ GWCR G + EA+ V  +M+ AG +P++  ++ ++ A    G++T A D+  E
Sbjct: 246 RHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKE 305

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M+  GCEPN+ ++  +++      + ++ ++V+ +M+R GCEAD +TY  LI   CK GK
Sbjct: 306 MVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGK 365

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +    ++L++M +KG  PN  T+  I     K  ++     +   M+ + C P+   YN+
Sbjct: 366 INRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNV 425

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           ++++          +++  EME ++  P ++T+ I+I  + G G    A +Y +EMI   
Sbjct: 426 VIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRG 485

Query: 493 CL-KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L  P   + + +L  L R  +L   +++   +V +G
Sbjct: 486 LLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKG 522



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/304 (19%), Positives = 120/304 (39%), Gaps = 41/304 (13%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           ++AGK+     A+  +  M  +  E   ++++I+++ +       EA+  F  ME  GC 
Sbjct: 291 SMAGKMTD---AFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCE 347

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-------------------------- 249
            D + ++ +IS  C+  + +      D++K K                            
Sbjct: 348 ADVVTYTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLEL 407

Query: 250 ----------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
                     PD+ +Y  ++R  C+ G + +  +++ EM+ +   P + T+ I+I     
Sbjct: 408 IESMRMVGCVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLG 467

Query: 300 CGQITRAHDVFAEMLEVG--CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
            G +  A + F EM+  G    P       L+   ++  +      V++ +   GCE + 
Sbjct: 468 QGCLVEACEYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNA 527

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
             +   I     +G +++A      M+     P   TF  + R + KL +   A  +  K
Sbjct: 528 DAWTIWIHSLFSNGHVKEACSYCLDMMEADIMPKPETFAKLMRGLRKLYNREFAAEITEK 587

Query: 418 MKDL 421
           +KD 
Sbjct: 588 IKDF 591


>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g71060, mitochondrial; Flags: Precursor
 gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
 gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 510

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 221/421 (52%), Gaps = 15/421 (3%)

Query: 107 ISPSTVRHVIEK--SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           +SP+ +  V++K  + GV         LS F W   +  F H+   Y+ +I   GK++QF
Sbjct: 92  LSPALIEEVLKKLSNAGV-------LALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
            L W  +D MK++ + ++ +TF+++ RRY RA    EA+ AF++MEE+G   +   F+ +
Sbjct: 145 KLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRM 203

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +  L + R   +AQ  FD +K K FEPD+  YT L+ GW +  N+   + V REMK  G 
Sbjct: 204 LDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGF 263

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V  Y I+I+A C+  +   A   F EM +  C+P+   F +L+       +    L+
Sbjct: 264 EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            + + K  G   +  TYN L+  +C   ++EDA K ++ M  KG  PNA T+++I   + 
Sbjct: 324 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           ++     A+ +Y  M    CEP   TY I+++MF   +  DM +K+  EM+   V P ++
Sbjct: 384 RMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
            +  LIT  C     + A +Y  EM++     PG  ++  + Q L   G+  K  +LV K
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPG-HMFSRLKQTLLDEGRKDKVTDLVVK 499

Query: 524 M 524
           M
Sbjct: 500 M 500



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 4/250 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK    E  V  + I++  + +A    EA+  FN ME+  C P    F  +I+ L  +++
Sbjct: 258 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 317

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            ++A  FF+  K   F  +   Y  LV  +C +  + +A +   EM++ G+ PN  TY I
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++  L R  +   A++V+  M    CEP   T+  ++R+     R +  ++++++MK  G
Sbjct: 378 ILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 434

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                  ++ LI   C + KL++A +  N M+  G  P    F+ + + +   G  +   
Sbjct: 435 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVT 494

Query: 413 RMYGKMKDLK 422
            +  KM  L+
Sbjct: 495 DLVVKMDRLR 504



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 9/225 (4%)

Query: 130 QVLSFFNWVTAR---PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           + + FFN +  R   P    SP ++  +IN  G  ++ + A  F +  KS    +   T+
Sbjct: 285 EAIRFFNEMEQRNCKP----SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + LV  Y  +    +A    + M   G  P+   + I++  L R +R+ EA   + ++  
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS- 399

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             EP V  Y  +VR +C    +  A +++ EMK  G+ P ++ +S +I ALC   ++  A
Sbjct: 400 -CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            + F EML+VG  P    F+ L +  +   R +KV  +  +M RL
Sbjct: 459 CEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503


>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 236/432 (54%), Gaps = 14/432 (3%)

Query: 84  SLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPE 143
           S NP+ +I  L LG S       +SP+ V  V+++             LSFF W   +  
Sbjct: 93  SKNPNSSIEKLLLGAS-----FKVSPALVLEVLKRLSNAG-----ALALSFFKWAEKQKG 142

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+++ + Y+ +I+  GK++QF++ W+ ++ MK + V +T +TF+++ RRY R+G   EA+
Sbjct: 143 FMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGV-LTKETFALISRRYARSGKVKEAM 201

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGW 262
           + F +ME++G   +   F+ ++  L + R+   AQ+ FD +K  +F PD+  YT L+ GW
Sbjct: 202 NTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGW 261

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            +  N+ + + V+REMK  G +P+V TY I+I+A C+  +   A ++F EM    C+P+ 
Sbjct: 262 GQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSP 321

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             F  L+       R  + L+ + + K  G   +T TYN ++  +C   +++DA ++++ 
Sbjct: 322 HIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDE 381

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSK 441
           M + G  PN+ T+++I   + K      A  ++ KM  + +CEP   TY+I+++MF    
Sbjct: 382 MRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMD 441

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             +  +K+   M+   V P ++ + ILI   C     + A KY +EM++   ++P ++++
Sbjct: 442 KVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVG-IRPPAALF 500

Query: 502 EMVLQQLRRAGQ 513
             + Q L   G+
Sbjct: 501 SHLKQALIEDGR 512



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 2/254 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK    E  V T+ IL+  Y +     +A+  F  ME   C P    F  +I+ L   RR
Sbjct: 277 MKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRR 336

Query: 234 ASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            SEA  FF   K   F P+   Y  +V  +C +  I +A R+  EM+ +G+ PN  TY I
Sbjct: 337 LSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDI 396

Query: 293 VIDALCRCGQITRAHDVFAEML-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           ++  L +  + T A  VF +M  E  CEP   T++ ++R+     + E  ++V+++MK  
Sbjct: 397 ILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAK 456

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G       ++ LI+  C + KL+ A K    M+  G  P A+ F+ + + + + G  +  
Sbjct: 457 GVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTV 516

Query: 412 HRMYGKMKDLKCEP 425
             +  K+  L+  P
Sbjct: 517 VLLAQKIDKLRKTP 530



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 45/313 (14%)

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           R + R+G + EA   F +M+  G++     ++ ++D L +  Q+  A +VF +M      
Sbjct: 189 RRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFV 248

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+  ++  L+    +     K+ +VY +MK  G E D +TY  LI+ +CK  K +DAI++
Sbjct: 249 PDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIEL 308

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDV------------------------------- 408
              M  K C P+   F  +   I+ LG V                               
Sbjct: 309 FREMESKNCQPSPHIFCTL---INGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGA 365

Query: 409 -------NGAHRMYGKMKDLKCEPNTVTYNILM-QMFATSKSTDMVLKLKKEMEENEVEP 460
                  + A+RM  +M+     PN+ TY+I++  +    K+T+     +K   E E EP
Sbjct: 366 YCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEP 425

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            V+TY I++ M+C M    +A K + + ++ K + PG  ++ +++  L    +L    + 
Sbjct: 426 TVSTYDIIVRMFCNMDKVESAIK-VWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKY 484

Query: 521 VEKMVDRGFTARP 533
            ++M+D G   RP
Sbjct: 485 FQEMLDVGI--RP 495



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 105/207 (50%), Gaps = 2/207 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP ++  +IN  G VR+   A  F    K+        T++ +V  Y  +    +A    
Sbjct: 320 SPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMV 379

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCR 264
           + M + G  P+   + I++  L +  + +EA S F+ +  +++ EP V  Y  +VR +C 
Sbjct: 380 DEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCN 439

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +  A +V+  MK  G+ P ++ +SI+I++LC   ++  A   F EML+VG  P +  
Sbjct: 440 MDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAAL 499

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRL 351
           F++L +  ++  R + V+ +  ++ +L
Sbjct: 500 FSHLKQALIEDGRKDTVVLLAQKIDKL 526


>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 245/496 (49%), Gaps = 32/496 (6%)

Query: 62  KFHSLIKDHHRKNPNPS----SNSNPSLNPDFTIPSLS-LGFSQISTAHSISPSTVRHVI 116
           +F S+   H    P P     S   PSL P +    +S +     +  H++  S   + I
Sbjct: 20  QFFSITPCHFSSIPQPPDDALSTGLPSLQPSYDADLISKILLQHHNPFHAMESSLQLNGI 79

Query: 117 EKSCGVRHGIPLLQV-------LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWH 169
             S  + H   LL++       LSFF W   +    H    Y+ +I++  KVRQFD+AW 
Sbjct: 80  ALSTHLVHQ-TLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQ 138

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA----FSIVI 225
           FI  M   ++E T  TF IL+RR V AGL  +AV AF+ M    C  +K A    F  ++
Sbjct: 139 FIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDM---SCFVEKDADSDDFCYLL 195

Query: 226 SILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             L +      A   F+  K KFE +  +YT L+ GWC+   +S AER+  EM   GJ  
Sbjct: 196 DTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGJXA 255

Query: 286 NVYTYSIVIDALCRCGQ----------ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           NV TY+++++ +CR             I  A  V  EM + G EP+  +++ ++ V+ +A
Sbjct: 256 NVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIHVYSRA 315

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            + E  L     MK  G      TY  ++ C C  G+LEDA ++++ MV+ G +P+A+T+
Sbjct: 316 HKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATY 375

Query: 396 NMIFRCISKLGDVNGAHRMYGKMK-DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           N  F+      D + A R+Y KMK +  C P+  TYNIL+ MF      ++V ++  +M+
Sbjct: 376 NCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMK 435

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            +   P++++Y +LI   C    W  A  +  EMIE+  L P    +E + + L ++  L
Sbjct: 436 TSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYL-PQKITFETLYRGLIQSDML 494

Query: 515 QKHEELVEKMVDRGFT 530
           +    L +K+ +   T
Sbjct: 495 KTWRRLKKKLEEESIT 510


>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
 gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 246/496 (49%), Gaps = 32/496 (6%)

Query: 62  KFHSLIKDHHRKNPNPS----SNSNPSLNPDFTIPSLS-LGFSQISTAHSISPSTVRHVI 116
           +F S+   H    P P     S   PSL P +    +S +     +  H++  S   + I
Sbjct: 20  QFFSITPCHFSSIPQPPDDALSTGLPSLQPSYDADLISKILLQHHNPFHAMESSLQLNGI 79

Query: 117 EKSCGVRHGIPLLQV-------LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWH 169
             S  + H   LL++       LSFF W   +    H    Y+ +I++  KVRQFD+AW 
Sbjct: 80  ALSTHLVHQ-TLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQ 138

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA----FSIVI 225
           FI  M   ++E T  TF IL+RR V AGL  +AV AF+ M    C  +K A    F  ++
Sbjct: 139 FIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDM---SCFVEKDADSDDFCYLL 195

Query: 226 SILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             L +      A   F+  K KFE +  +YT L+ GWC+   +S AER+  EM   GI+ 
Sbjct: 196 DTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGIEA 255

Query: 286 NVYTYSIVIDALCRCGQ----------ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           NV TY+++++ +CR             I  A  V  EM + G EP+  +++ ++ V+ +A
Sbjct: 256 NVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRA 315

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            + E  L     MK  G      TY  ++ C C  G+LEDA ++++ MV+ G +P+A+T+
Sbjct: 316 HKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATY 375

Query: 396 NMIFRCISKLGDVNGAHRMYGKMK-DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           N  F+      D + A R+Y KMK +  C P+  TYNIL+ MF      ++V ++  +M+
Sbjct: 376 NCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMK 435

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            +   P++++Y +LI   C    W  A  +  EMIE+  L P    +E + + L ++  L
Sbjct: 436 TSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYL-PQKITFETLYRGLIQSDML 494

Query: 515 QKHEELVEKMVDRGFT 530
           +    L +K+ +   T
Sbjct: 495 KTWRRLKKKLEEESIT 510


>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 549

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 230/486 (47%), Gaps = 17/486 (3%)

Query: 31  LNEDDDGDCVTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFT 90
            +EDD  + V    S+P           + E+ H          P  +S+       DF 
Sbjct: 49  FDEDDHDEFVLPIKSNP-----------VEERSHGGGSKPLSIRPEAASHEEAEFEADFD 97

Query: 91  IPS--LSLGFSQ---ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFV 145
             S  L+  F+    I  A    P  V   +      R G   +    FF W  A+  + 
Sbjct: 98  EASRILTSCFASPEAIVIAMDCCPVRVSDRMVDKILRRFGSDWVAAFGFFMWAGAQEGYR 157

Query: 146 HSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           HS D Y+ M+++ GK +QFDL W  I  M      +++ T + ++RR   A    +A+ A
Sbjct: 158 HSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDA 217

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
           FN+M+++G   D  A ++++  LC++R    A+  F  L+    PD   +  LV GWC+A
Sbjct: 218 FNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCKA 277

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             ++EA  + +EM+  G +P+V TY+ +I+A C        + +  EM   GC PN IT+
Sbjct: 278 RMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITY 337

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             +M    KA RT++ L ++++++  GC  D   YN LI    + G+LEDA  V++ M  
Sbjct: 338 TIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRM 397

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G  P  +TFN +            A +M  KM++  C+P+  TY  L+++    +   +
Sbjct: 398 TGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKV 457

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
           +  L   M   ++ P+ +TY +L+T  C  G    +  ++ EM+  K   P    +++V 
Sbjct: 458 LRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMV-LKGFAPKKETFDLVA 516

Query: 506 QQLRRA 511
           ++L +A
Sbjct: 517 EKLDKA 522



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 2/243 (0%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G + +  +Y+ ++D L +  Q      + ++M E+G   +  T   +MR    ASR    
Sbjct: 155 GYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDA 214

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           +  +N+M + G   DT   N L+D  CK+  ++ A      + R    P+ S+FN +   
Sbjct: 215 IDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQEL-RGSVPPDESSFNTLVHG 273

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             K   +N A  M  +M++   +P+ +TY  L++ +   K    V  +  EM      PN
Sbjct: 274 WCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPN 333

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V TY I++      G    A     ++  + C  P +S Y  ++  L RAG+L+    +V
Sbjct: 334 VITYTIVMHALGKAGRTQEALDIFDKVRGDGC-APDASFYNSLIYILGRAGRLEDANSVV 392

Query: 522 EKM 524
           +KM
Sbjct: 393 DKM 395


>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 206/388 (53%), Gaps = 1/388 (0%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           +Q    F W   +  + HSP+ Y+ M+++ GK + F L W  +D M      ++++T S 
Sbjct: 188 IQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSK 247

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++RR  RAG   EA+HAF  +E+YG + D  A ++++  L ++    +A + F  LK   
Sbjct: 248 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 307

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
             ++  +  L+ G+C+A  + EA ++  E++ +G++P+V +Y+  I+A CR         
Sbjct: 308 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDK 367

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  +M   GC+PN ITF  +M    KA +  + L+VY +MK+ GC  D+  Y+ LI    
Sbjct: 368 VLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILG 427

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K G+L D  +++  M ++G  P+  T+N +  C         A  +  KM+++ C+P+  
Sbjct: 428 KAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLK 487

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY+ L++MF   K   ++  L   M +N+V     TY IL+   C  G  + A  +  EM
Sbjct: 488 TYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEM 547

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
           +  K + P  S ++M+ ++L R   L++
Sbjct: 548 L-SKAMVPKDSTFKMLKEELERKSMLEE 574



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 4/243 (1%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +Y+ ++D L +        ++  EM  +    +  T + ++R   +A R ++ +  +  +
Sbjct: 209 SYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNI 268

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP-NASTFNMIFRCISKLGD 407
           ++ G   DT   N L+D   K+  +EDA  V   +  K   P N ++FN++     K   
Sbjct: 269 EKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL--KCSIPFNLASFNVLIHGYCKAKK 326

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A ++ G+++    EP+ ++Y   ++     K    V K+  +ME    +PNV T+ I
Sbjct: 327 LDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTI 386

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++         N A K   +M +E C+ P SS Y  ++  L +AG+L   +E+VE M  +
Sbjct: 387 IMHALGKAKQINEALKVYEKMKKEGCV-PDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQ 445

Query: 528 GFT 530
           G T
Sbjct: 446 GVT 448



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 1/191 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK +Q + A    + MK          +S L+    +AG   +       ME+ G  PD 
Sbjct: 392 GKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDV 451

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ +IS  C   +   A +    +++   +PD+  Y  L++ +CR   +   + +   
Sbjct: 452 LTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDH 511

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    +     TY+I++  LC  G++  A   F EML     P   TF  L     + S 
Sbjct: 512 MFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSM 571

Query: 338 TEKVLQVYNQM 348
            E++  + N M
Sbjct: 572 LEEMKIIENLM 582


>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 614

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 206/388 (53%), Gaps = 1/388 (0%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           +Q    F W   +  + HSP+ Y+ M+++ GK + F L W  +D M      ++++T S 
Sbjct: 211 IQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSK 270

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++RR  RAG   EA+HAF  +E+YG + D  A ++++  L ++    +A + F  LK   
Sbjct: 271 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 330

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
             ++  +  L+ G+C+A  + EA ++  E++ +G++P+V +Y+  I+A CR         
Sbjct: 331 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDK 390

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  +M   GC+PN ITF  +M    KA +  + L+VY +MK+ GC  D+  Y+ LI    
Sbjct: 391 VLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILG 450

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K G+L D  +++  M ++G  P+  T+N +  C         A  +  KM+++ C+P+  
Sbjct: 451 KAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLK 510

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY+ L++MF   K   ++  L   M +N+V     TY IL+   C  G  + A  +  EM
Sbjct: 511 TYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEM 570

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
           +  K + P  S ++M+ ++L R   L++
Sbjct: 571 L-SKAMVPKDSTFKMLKEELERKSMLEE 597



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 4/243 (1%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +Y+ ++D L +        ++  EM  +    +  T + ++R   +A R ++ +  +  +
Sbjct: 232 SYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNI 291

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP-NASTFNMIFRCISKLGD 407
           ++ G   DT   N L+D   K+  +EDA  V   +  K   P N ++FN++     K   
Sbjct: 292 EKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL--KCSIPFNLASFNVLIHGYCKAKK 349

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A ++ G+++    EP+ ++Y   ++     K    V K+  +ME    +PNV T+ I
Sbjct: 350 LDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTI 409

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++         N A K   +M +E C+ P SS Y  ++  L +AG+L   +E+VE M  +
Sbjct: 410 IMHALGKAKQINEALKVYEKMKKEGCV-PDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQ 468

Query: 528 GFT 530
           G T
Sbjct: 469 GVT 471



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 1/191 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK +Q + A    + MK          +S L+    +AG   +       ME+ G  PD 
Sbjct: 415 GKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDV 474

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ +IS  C   +   A +    +++   +PD+  Y  L++ +CR   +   + +   
Sbjct: 475 LTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDH 534

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    +     TY+I++  LC  G++  A   F EML     P   TF  L     + S 
Sbjct: 535 MFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSM 594

Query: 338 TEKVLQVYNQM 348
            E++  + N M
Sbjct: 595 LEEMKIIENLM 605


>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
          Length = 1184

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 227/458 (49%), Gaps = 27/458 (5%)

Query: 61  EKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSC 120
           EK + ++++HH +                 +P L L  ++  +   + P  +  V+ + C
Sbjct: 68  EKIYRILRNHHSR-----------------VPKLELALNE--SGIDLRPGLIIRVLSR-C 107

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
           G    +       FF W T +P + HS ++   M+ +  K+RQF   W  I+ M+  N E
Sbjct: 108 GDAGNLGY----RFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPE 163

Query: 181 -ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
            I  + F +L+RR+  A +  +AV   + M +YG  PD+  F  ++  LC+     EA  
Sbjct: 164 LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 223

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            F+ +++KF P++  +T+L+ GWCR G + EA+ V  +MK AG++P++  ++ ++     
Sbjct: 224 VFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 283

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS-RTEKVLQVYNQMKRLGCEADTI 358
            G++  A+D+  +M + G EPN   +  L++   +   R ++ ++V+ +M+R GCEAD +
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  LI   CK G ++    VL+ M +KG  P+  T+  I     K         +  KM
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           K   C P+ + YN+++++          ++L  EME N + P V+T+ I+I  +   G  
Sbjct: 404 KRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFL 463

Query: 479 NNAYKYIREMIEEKCLK-PGSSVYEMVLQQLRRAGQLQ 515
             A  + +EM+       P     + +L  L R  +L+
Sbjct: 464 IEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 42/309 (13%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVI---VYTNLVRGWCRAGNISEAERVFREMKM 280
           ++ IL + R+        + ++ K  P++I   ++  L+R +  A  + +A  V  EM  
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMR-KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK 195

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G++P+ Y +  ++DALC+ G +  A  VF +M E    PN   F +L+           
Sbjct: 196 YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLL----------- 243

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
                              Y +     C++GKL +A +VL  M   G  P+   F  +  
Sbjct: 244 -------------------YGW-----CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 279

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA-TSKSTDMVLKLKKEMEENEVE 459
             +  G +  A+ +   M+    EPN   Y +L+Q    T K  D  +++  EME    E
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCE 339

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            ++ TY  LI+ +C  G  +  Y  + +M  +K + P    Y  ++    +  Q ++  E
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDM-RKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398

Query: 520 LVEKMVDRG 528
           L+EKM  RG
Sbjct: 399 LIEKMKRRG 407



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 12/209 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y +++    K  QF+     I+ MK R     +  +++++R   + G   EAV  +N ME
Sbjct: 380 YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGN 267
             G +P    F I+I+    +    EA + F  +  +     P      +L+    R   
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDK 499

Query: 268 ISEAERVFR--EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           +  A+ V+     K +  + NV  ++I I AL   G +  A     +M+E+   P   T+
Sbjct: 500 LEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTY 559

Query: 326 NNLMR-------VHVKASRTEKVLQVYNQ 347
             LM+         + A  TEKV+++ ++
Sbjct: 560 AKLMKGLNKLYNRTIAAEITEKVVKMASE 588


>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 519

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 243/484 (50%), Gaps = 11/484 (2%)

Query: 46  SPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSS---NSNPSLNPDFTIPSLSLGFSQIS 102
           S   P  S    L++ K ++L     R    PS    N    +  D   P   L  S  +
Sbjct: 8   SKPRPLCSLFSYLLNSKSYTLSSLAPRTKNLPSPDLVNEISRILSDHRNPHHDLELSLTT 67

Query: 103 TAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
            +  IS + V  V+++   +           FF W    P F HS + YH ++++ G  +
Sbjct: 68  YSSHISTTLVEQVLKRCKNLG-----FSAQRFFLWAKRIPGFDHSKESYHILVDILGSSK 122

Query: 163 QFDLAWHF-IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           QF L W F I++ +S++ EI+   F ++ R Y RA L ++A+ AF+RM E+G  P     
Sbjct: 123 QFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDL 182

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
             ++ +LC+++ A  AQ  FD +K +F+     Y+ LVRGW   G    A +VF EM+  
Sbjct: 183 DQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQ 242

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
               +V  Y+ +++A C+ G+++ A+ +F EM   G +P++ TF+  +R + +A+     
Sbjct: 243 QCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLA 302

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            +V ++MKR     +  TYN +I   CK  K+E+A ++LN ++ +   P+A ++N I   
Sbjct: 303 YRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAY 362

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             +  +VN A R+  +M    C P+  +YN+L+++       D  +++ + M E    P+
Sbjct: 363 HCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPS 422

Query: 462 VNTYRILITMYC-GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           V+TY +++   C   G    A KY   MI+E  + P SS  E++  +L   G L   E L
Sbjct: 423 VSTYSVMVHGLCKKKGKLEEACKYFEMMIDEG-IPPYSSTVEILRNRLIGLGLLDYIEIL 481

Query: 521 VEKM 524
             KM
Sbjct: 482 AGKM 485



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 187/395 (47%), Gaps = 9/395 (2%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDL-MKSRNVEITVDTFSILVRRYVRA 196
           +  R + + SPDL +E+  +    R      H ++L + + +  I+      +++R    
Sbjct: 31  LAPRTKNLPSPDLVNEISRILSDHRN---PHHDLELSLTTYSSHISTTLVEQVLKRCKNL 87

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIV 254
           G +A+    + +    G    K ++ I++ IL   ++ +    F   +++   FE    V
Sbjct: 88  GFSAQRFFLWAKRIP-GFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQV 146

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           +  + R + RA   S+A R F  M   G++P +     ++  LC+      A  +F + +
Sbjct: 147 FWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIF-DRV 205

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           +   +  + T++ L+R       +    +V+++M+   C  D + YN L++  CK GK+ 
Sbjct: 206 KHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVS 265

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +A K+   M   G  P+A TF++  R   +  D++ A+R+  +MK     PN  TYN ++
Sbjct: 266 EAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMI 325

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           +     +  +   +L  E+ E   +P+  +Y  ++  +C     N+A + I  M+++ CL
Sbjct: 326 KKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCL 385

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            P    Y M+L+ L R G+  +  E+ E M ++GF
Sbjct: 386 -PDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGF 419


>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
 gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 209/392 (53%), Gaps = 13/392 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MI++  KVRQFD+ W  I  M  RNV+ T +TF +L+RR V AGL  +A+ AF+ ME
Sbjct: 143 YNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDME 202

Query: 211 EYGCAP-DKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
            +   P ++  F  ++  LC+          F+  K +F P+V +YT L+ GWC+ G I 
Sbjct: 203 SFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRID 262

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ----------ITRAHDVFAEMLEVGCE 319
            AER  +E    GI+  V TY+++++ +CR             IT A ++F EM E G E
Sbjct: 263 MAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIE 322

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+  +F+ ++ V+ +A + E  L     MK  G     +TY  ++ C C  G++EDA ++
Sbjct: 323 PDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEEL 382

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK-DLKCEPNTVTYNILMQMFA 438
           L  MVR G +  A T+N  F+      D   A ++Y KM+ D        +YNIL++MF 
Sbjct: 383 LGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFM 442

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
                D+V ++ ++++ + + P++++Y +LI   C    W  A K+  EMI EK L P  
Sbjct: 443 MLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMI-EKGLLPQK 501

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +E + + L ++  L+    L +K+ +   T
Sbjct: 502 VTFETLYKGLIQSDMLRTWRRLKKKLDEESIT 533


>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 220/411 (53%), Gaps = 13/411 (3%)

Query: 107 ISPSTVRHVIEK--SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           +SP+ V  V++K  + GV         LSFF W   +  F +S + Y+ +I   GK++QF
Sbjct: 109 VSPTLVLEVLKKLSNSGV-------IALSFFRWAEKQKGFKYSTENYNALIEALGKIKQF 161

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
            + W+ ++ M+S+ + +T +TF+++ RRY RA    EAV  F +ME++G  P    F+ +
Sbjct: 162 KMIWNLVNDMRSKGL-LTQETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRL 220

Query: 225 ISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +  LC+ R    AQ  FD +KD KF PD+  YT L+ GW +  N+   + V+REMK  G 
Sbjct: 221 LDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGF 280

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+  TY I+I+A C+  +   A ++F +M    C P    +  L+       R  + LQ
Sbjct: 281 EPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQ 340

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            + + K  G   +  TYN ++  +C+  +++DA ++++ M + G  P   T+++I   + 
Sbjct: 341 FFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLI 400

Query: 404 KLGDVNGAHRMY-GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           K      A+R++ G   +  CEP+  TY I+++MF   +  DM L++  EM+   V P +
Sbjct: 401 KARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGM 460

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           + +  LI   C     + A KY  EM++   ++P ++++  + Q L   G+
Sbjct: 461 HMFSTLINSLCYENKLDEACKYFHEMLDMG-IRPPAAMFSNLKQTLLDEGK 510



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 2/207 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P +Y  +IN  G  R+   A  F +  K+        T++ +V  Y ++    +A    
Sbjct: 318 TPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIV 377

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCR 264
           + M + G  P    + I++  L + RR  EA   F  +  +   EP V  Y  +VR +C 
Sbjct: 378 DEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCN 437

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +  A RV+ EMK  G+ P ++ +S +I++LC   ++  A   F EML++G  P +  
Sbjct: 438 EERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAM 497

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRL 351
           F+NL +  +   + + VL +  ++ ++
Sbjct: 498 FSNLKQTLLDEGKQDMVLILAQKLDKI 524


>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1188

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 218/428 (50%), Gaps = 10/428 (2%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           +P L L  ++  +   + P  +  V+ + CG    +       FF W T +P + HS ++
Sbjct: 84  VPKLELSLNE--SGIDLRPGLIVRVLSR-CGDAGNLGY----RFFLWATKQPGYCHSYEV 136

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
              M+ +  K+RQF   W  I+ M+  N E I  + F +L+RR+  A +  +AV   + M
Sbjct: 137 CKSMVKILSKMRQFGAVWGLIEEMRKENPELIEPELFVVLIRRFASANMVKKAVEVLDEM 196

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
            +YG  PD+  F  ++  LC+     +A   F+ +++K  P++  +T+L+ GWCR G + 
Sbjct: 197 PKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREKIPPNLRYFTSLLYGWCREGKLM 256

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ V  +MK AG++P++  ++ ++      G++  A+D+  +M + G EPN+  +  L+
Sbjct: 257 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLI 316

Query: 330 RVHVKAS-RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +   +   R ++ ++V+ +M+R GCEAD +TY  LI   CK G ++    VL+ M +KG 
Sbjct: 317 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 376

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+  I     K         +  KMK + C P+ + YN+++++    +     ++
Sbjct: 377 MPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVR 436

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK-PGSSVYEMVLQQ 507
           L  EME N + P  + + I+I  +   G+   A  + +EM+       P     + +L  
Sbjct: 437 LWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNT 496

Query: 508 LRRAGQLQ 515
           L R  +L+
Sbjct: 497 LLRDDKLE 504



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 97/244 (39%), Gaps = 47/244 (19%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K    D  +  +D M+ + V  +  T+  ++  + +     E +    +M+
Sbjct: 348 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMK 407

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD + +++VI + C  R   EA   ++ ++ +   P   ++  ++ G+   G + 
Sbjct: 408 QIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLI 467

Query: 270 EAERVFREMKMAGI---------------------------------------QPNVYTY 290
           EA   F+EM   GI                                       + NV  +
Sbjct: 468 EACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLEMAKDVWSCISNKTSSCELNVSAW 527

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR-------VHVKASRTEKVLQ 343
           +I I AL   G +  A     +M+E+   P   T+  LM+         + A  TEKV++
Sbjct: 528 TIWIHALFAKGHVKEACSYCLDMMEMDLMPQPNTYVKLMKGLNKLYNRTIAAEITEKVMK 587

Query: 344 VYNQ 347
           + ++
Sbjct: 588 MASE 591


>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
 gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
 gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
 gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 511

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 209/393 (53%), Gaps = 16/393 (4%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           + D Y  +++  G+ RQFD AW  + +  + +   T  TF++L RRYV AG+  +AV AF
Sbjct: 102 AADAYDAVVDALGRARQFDAAWRLV-VEAAADGAATPRTFAVLARRYVAAGMTRQAVRAF 160

Query: 207 NRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
           + ME + G  PD   F+ ++  LC+ +    A   F+  K K+EP+  +YT L+ GWC+ 
Sbjct: 161 DDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKV 220

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ----------ITRAHDVFAEMLE 315
                A++  ++M   GI+PN+ TY+I+++ +CR             +  A D+  EM +
Sbjct: 221 NRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQ 280

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G EPN  +++ ++ V+ +A + E  L ++  MK  G      TY  +I C    G+L+D
Sbjct: 281 RGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDD 340

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK--DLKCEPNTVTYNIL 433
           A  +L+ M  +G  P+ +T+N  F+      DVNGA ++Y KMK       P+  TYNIL
Sbjct: 341 AESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNIL 400

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           + MF      D V+++  +M E+ V P++N+Y +L+   C    W  A ++  EMIE   
Sbjct: 401 LGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGF 460

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           L P    +E + + L +A  L+    L +K VD
Sbjct: 461 L-PQKITFETLYRGLIQADMLRTWRRL-KKRVD 491


>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 570

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 223/463 (48%), Gaps = 23/463 (4%)

Query: 75  PNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGV------------ 122
           P P+S+       D          S+I ++H  SP  +  VI   C              
Sbjct: 82  PAPASHEEAEFEADID------EVSRILSSHFASPEAI--VIAMDCCPVRVSGRMVDKIL 133

Query: 123 -RHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
            R G   +    FF W  A+  + H  DLY+ M+++ GK +QFDL W  I  M      +
Sbjct: 134 RRFGSDWVAAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWGLIRQMDEIGCLV 193

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           ++ T + ++RR   A    +A+ AFN+M+++G   D  A + ++  LC+++    A+  F
Sbjct: 194 SLATMTKVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLCKEKSVKRARGVF 253

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
             L+    PD   +  LV GWC+A  ++EA    +EM+  G  P+V TY+ +I+A C   
Sbjct: 254 QELRGVVPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEK 313

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
                + +  EM   GC PN IT+  +M    KA RT++ L V++++KR GC  D   YN
Sbjct: 314 DFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYN 373

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I    + G+LEDA  V + M R G  P  + FN +            A ++  KM++ 
Sbjct: 374 SIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQ 433

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C+P+  TY  L+++    +   ++  L   M   ++ P+ +TY +L+T  C  G    +
Sbjct: 434 SCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQS 493

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             ++ EM+  K   P    +++V+++L + G L   ++ ++ +
Sbjct: 494 CLFLEEMV-LKGFMPKQETFDLVMEKLDK-GNLHSAKKKIQHL 534


>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
 gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 638

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 227/458 (49%), Gaps = 27/458 (5%)

Query: 61  EKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSC 120
           EK + ++++HH +                 +P L L  ++  +   + P  +  V+ + C
Sbjct: 68  EKIYRILRNHHSR-----------------VPKLELALNE--SGIDLRPGLIIRVLSR-C 107

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
           G    +       FF W T +P + HS ++   M+ +  K+RQF   W  I+ M+  N E
Sbjct: 108 GDAGNLGY----RFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPE 163

Query: 181 -ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
            I  + F +L+RR+  A +  +AV   + M +YG  PD+  F  ++  LC+     EA  
Sbjct: 164 LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 223

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            F+ +++KF P++  +T+L+ GWCR G + EA+ V  +MK AG++P++  ++ ++     
Sbjct: 224 VFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 283

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTI 358
            G++  A+D+  +M + G EPN   +  L++   +   R ++ ++V+ +M+R GCEAD +
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  LI   CK G ++    VL+ M +KG  P+  T+  I     K         +  KM
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           K   C P+ + YN+++++          ++L  EME N + P V+T+ I+I  +   G  
Sbjct: 404 KRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFL 463

Query: 479 NNAYKYIREMIEEKCLK-PGSSVYEMVLQQLRRAGQLQ 515
             A  + +EM+       P     + +L  L R  +L+
Sbjct: 464 IEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 42/309 (13%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVI---VYTNLVRGWCRAGNISEAERVFREMKM 280
           ++ IL + R+        + ++ K  P++I   ++  L+R +  A  + +A  V  EM  
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMR-KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK 195

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G++P+ Y +  ++DALC+ G +  A  VF +M E    PN   F +L+           
Sbjct: 196 YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLL----------- 243

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
                              Y +     C++GKL +A +VL  M   G  P+   F  +  
Sbjct: 244 -------------------YGW-----CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 279

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA-TSKSTDMVLKLKKEMEENEVE 459
             +  G +  A+ +   M+    EPN   Y +L+Q    T K  D  +++  EME    E
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCE 339

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            ++ TY  LI+ +C  G  +  Y  + +M  +K + P    Y  ++    +  Q ++  E
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDM-RKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398

Query: 520 LVEKMVDRG 528
           L+EKM  RG
Sbjct: 399 LIEKMKRRG 407



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 12/209 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y +++    K  QF+     I+ MK R     +  +++++R   + G   EAV  +N ME
Sbjct: 380 YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTNLVRGWCRAGN 267
             G +P    F I+I+    +    EA + F  +  +     P      +L+    R   
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDK 499

Query: 268 ISEAERVFREM--KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           +  A+ V+  +  K +  + NV  ++I I AL   G +  A     +M+E+   P   T+
Sbjct: 500 LEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTY 559

Query: 326 NNLMR-------VHVKASRTEKVLQVYNQ 347
             LM+         + A  TEKV+++ ++
Sbjct: 560 AKLMKGLNKLYNRTIAAEITEKVVKMASE 588


>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
          Length = 511

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 209/393 (53%), Gaps = 16/393 (4%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           + D Y  +++  G+ RQFD AW  + +  + +   T  TF++L RRYV AG+  +AV AF
Sbjct: 102 AADAYDAVVDALGRARQFDAAWRLV-VEAAADGAATPRTFAVLARRYVAAGMTRQAVRAF 160

Query: 207 NRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
           + ME + G  PD   F+ ++  LC+ +    A   F+  K K+EP+  +YT L+ GWC+ 
Sbjct: 161 DDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKV 220

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ----------ITRAHDVFAEMLE 315
                A++  ++M   GI+PN+ TY+I+++ +CR             +  A D+  EM +
Sbjct: 221 NRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQ 280

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G EP+  +++ ++ V+ +A + E  L ++  MK  G      TY  +I C    G+L+D
Sbjct: 281 RGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDD 340

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK--DLKCEPNTVTYNIL 433
           A  +L+ M  +G  P+ +T+N  F+      DVNGA ++Y KMK       P+  TYNIL
Sbjct: 341 AESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNIL 400

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           + MF      D V+++  +M E+ V P++N+Y +L+   C    W  A ++  EMIE   
Sbjct: 401 LGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGF 460

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           L P    +E + + L +A  L+    L +K VD
Sbjct: 461 L-PQKITFETLYRGLIQADMLRTWRRL-KKRVD 491


>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
          Length = 655

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 213/397 (53%), Gaps = 2/397 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRR 192
           FF W + +P + HS ++Y  MI + GK+RQF   W  I+ M+  N + ++   F +L+RR
Sbjct: 141 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRR 200

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
           +  A +  +A+   + M +YGC PD+  F  ++  LC+     EA S F+ ++ +F P +
Sbjct: 201 FASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTL 260

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +T+L+ GWCR G + EA+ V  +++ AG +P++  Y+ ++      G++  A+D+  E
Sbjct: 261 KHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKE 320

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M    CEPN ++F  L++      + E+ ++V+ +M+  GC AD +TY  LI   CK GK
Sbjct: 321 MRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK 380

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +    ++L++M+++G  PN  T+  I     K  ++     +  +M+ + C P+   YNI
Sbjct: 381 ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 440

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           ++++          +++  EME   + P ++T+ I+I  +        A ++ +EM+   
Sbjct: 441 VIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRG 500

Query: 493 CLK-PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L  P     + +L  L RA +L+  +++   ++ +G
Sbjct: 501 LLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKG 537


>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 246/494 (49%), Gaps = 28/494 (5%)

Query: 51  FLSPEETLISEKFHSLI--KDHHRK---------NPNPSSNSN-----PSLNPDFTIPSL 94
           + S   TL    FHSL   K HH +         +PN  S+S        +  DF  P  
Sbjct: 6   WFSITRTLNHHFFHSLSSPKTHHSRLFSSQTILQDPNSLSSSQYINEISRILSDFRDPHH 65

Query: 95  SLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEM 154
            L     + +  I+P  V  V+++   +           FF W    P F HS + YH +
Sbjct: 66  DLERPLTAFSQKITPGLVEQVLKRCKNLG-----FSAHRFFLWAKRLPGFEHSKESYHIL 120

Query: 155 INLAGKVRQFDLAWHFI-DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +++ G  +QF L W F+ D+ ++R  EI  + F ++ R Y RA L  +A+ AF++M ++G
Sbjct: 121 VDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFG 180

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAER 273
                     ++ +LC+++   +AQ FFD +  +  P+   Y+ L+RGW   G+ SEA +
Sbjct: 181 VKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARK 240

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +F EM+  G   +V  Y+ +++ALC+ G +  A+ +F EM   G  P++ +++  +R + 
Sbjct: 241 LFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYC 300

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           + +      QV ++M+R     +  TYN ++   CK  K+++A ++L+ M+ +G +P+  
Sbjct: 301 EVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLW 360

Query: 394 TFNMI--FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           ++N I  F C     +VN A R+  +M+   C P+  TYN++++M       D V  +  
Sbjct: 361 SYNAIQAFHC--DHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWG 418

Query: 452 EMEENEVEPNVNTYRILITMYC-GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            MEE    P  +TY +++  +C   G    A KY   MI++  + P S   E++  ++  
Sbjct: 419 GMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDG-IPPYSCTVELLRNRVIG 477

Query: 511 AGQLQKHEELVEKM 524
            G  ++ + L  KM
Sbjct: 478 LGFSEQIDVLAGKM 491



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 156/319 (48%), Gaps = 4/319 (1%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI--VYTNLVRGWCRAGNISE 270
           G    K ++ I++ IL   ++      F   +++    ++   ++  + R +CRA    +
Sbjct: 109 GFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGD 168

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A R F +M   G++  V     ++  LC+   + +A + F + + V   PN+ T++ LMR
Sbjct: 169 AIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFF-DKVNVEVMPNAKTYSILMR 227

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
                  + +  +++ +M+  GC  D + YN L++  CK G +++A K+   M   G  P
Sbjct: 228 GWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAP 287

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +A ++++  R   ++ D++ A ++  +M+     PN  TYN +++    S+  D   +L 
Sbjct: 288 DACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLL 347

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            EM E  V P++ +Y  +   +C     N A + I  M +E C+ P    Y MVL+ L R
Sbjct: 348 DEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCM-PDRHTYNMVLKMLLR 406

Query: 511 AGQLQKHEELVEKMVDRGF 529
            G+  +  ++   M +RGF
Sbjct: 407 VGRFDRVTDVWGGMEERGF 425


>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 503

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/413 (32%), Positives = 214/413 (51%), Gaps = 17/413 (4%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           LS  N+  + P    S   Y+ +I++  KV QFDLA   I  M   N+  T  TF IL++
Sbjct: 79  LSLHNFSKSLPNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIK 138

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIA---FSIVISILCRKRRASEAQSFFDSLKDKF 248
           R + A L  +AV AFN +E Y     K+    F+ ++  LC+      A   F+   ++F
Sbjct: 139 RLISANLTRQAVRAFNEIESY--TDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRF 196

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ------ 302
             DV +YT L+ GWC+ G    A     EMK+ G++PNV TY+++++ +CR         
Sbjct: 197 VADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEER 256

Query: 303 ----ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
               I  A  VF EM E G EP+  +F+ ++ V+ +A + + VL     MK  G   + +
Sbjct: 257 FERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVV 316

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  +I C C  G++E+A  +++ MVR G +P A+T+N  F+      D + A + + KM
Sbjct: 317 TYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKM 376

Query: 419 K-DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           K D  CEP T TY +L+ MF  +    +V ++  +M E+ V P++++Y +LI   C    
Sbjct: 377 KEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKK 436

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           W  A +Y  EMIE+  L P    +E + + L ++  L+    L +++     T
Sbjct: 437 WREACQYFVEMIEKGFL-PQKVTFETLYRGLIQSDMLRTWRRLKKRLDQESIT 488


>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Vitis vinifera]
          Length = 622

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 213/397 (53%), Gaps = 2/397 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRR 192
           FF W + +P + HS ++Y  MI + GK+RQF   W  I+ M+  N + ++   F +L+RR
Sbjct: 108 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRR 167

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
           +  A +  +A+   + M +YGC PD+  F  ++  LC+     EA S F+ ++ +F P +
Sbjct: 168 FASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTL 227

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +T+L+ GWCR G + EA+ V  +++ AG +P++  Y+ ++      G++  A+D+  E
Sbjct: 228 KHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKE 287

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M    CEPN ++F  L++      + E+ ++V+ +M+  GC AD +TY  LI   CK GK
Sbjct: 288 MRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK 347

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +    ++L++M+++G  PN  T+  I     K  ++     +  +M+ + C P+   YNI
Sbjct: 348 ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 407

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           ++++          +++  EME   + P ++T+ I+I  +        A ++ +EM+   
Sbjct: 408 VIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRG 467

Query: 493 CLK-PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L  P     + +L  L RA +L+  +++   ++ +G
Sbjct: 468 LLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKG 504


>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
 gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
 gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
          Length = 540

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 221/421 (52%), Gaps = 9/421 (2%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           ++SP  V  V++       GI     L+FF W   +  F +S + +H +I   GK++QF 
Sbjct: 117 TVSPQLVAEVLKNLSNA--GI---LALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFR 171

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L W  ++ M+ R+  ++ DTF I+VRRY RA    EAV  F +M  +G   D   ++ +I
Sbjct: 172 LVWSLVEAMRCRSC-LSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLI 230

Query: 226 SILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
            IL + ++  +A + F  +K K  F PD+  YT L+ GW    ++   + V++EM  AGI
Sbjct: 231 DILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGI 290

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V  Y ++I A C+ G+   A  VF EM E GC P+   +  L+       R ++ L+
Sbjct: 291 KPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALK 350

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            +   K  G   +  T N +I  +C+  +   A K+++ M + G  PN  T+++I   + 
Sbjct: 351 YFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLI 410

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K   +  A+ ++ +M+   CEP   TY +++ MF +++  DM LK+ K+M+E  V P ++
Sbjct: 411 KSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMH 470

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
            +  LI   C       A  Y +EM+ +K ++P   ++  + + L   G++   +E+ ++
Sbjct: 471 MFSALINGLCFENRLEEACVYFQEML-DKGIRPPGQLFSNLKEALVEGGRITLAQEVTQR 529

Query: 524 M 524
           +
Sbjct: 530 L 530



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 1/253 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M    ++  V  + +L+  + ++G   EA+  F+ MEE GC P    + ++I+ L    R
Sbjct: 285 MLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMER 344

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRG-WCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  +F   K+   P  +   N V G +CRA     A ++  EM+ +GI PN  TY I
Sbjct: 345 LDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++ L +  +I  A+++F  M   GCEP   T+  ++ +     R +  L+V+ QMK  G
Sbjct: 405 ILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKG 464

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                  ++ LI+  C + +LE+A      M+ KG  P    F+ +   + + G +  A 
Sbjct: 465 VLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQ 524

Query: 413 RMYGKMKDLKCEP 425
            +  +++ L+  P
Sbjct: 525 EVTQRLEMLRRTP 537


>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
          Length = 540

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 221/421 (52%), Gaps = 9/421 (2%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           ++SP  V  V++       GI     L+FF W   +  F +S + +H +I   GK++QF 
Sbjct: 117 TVSPQLVAEVLKNLSNA--GI---LALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFR 171

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L W  ++ M+ R+  ++ DTF I+VRRY RA    EAV  F +M  +G   D   ++ +I
Sbjct: 172 LVWSLVEAMRCRSC-LSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLI 230

Query: 226 SILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
            IL + ++  +A + F  +K K  F PD+  YT L+ GW    ++   + V++EM  AGI
Sbjct: 231 DILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGI 290

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V  Y ++I A C+ G+   A  VF EM E GC P+   +  L+       R ++ L+
Sbjct: 291 KPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALK 350

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            +   K  G   +  T N +I  +C+  +   A K+++ M + G  PN  T+++I   + 
Sbjct: 351 YFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLI 410

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K   +  A+ ++ +M+   CEP   TY +++ MF +++  DM LK+ K+M+E  V P ++
Sbjct: 411 KSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMH 470

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
            +  LI   C       A  Y +EM+ +K ++P   ++  + + L   G++   +E+ ++
Sbjct: 471 MFSALINGLCFDNRLEEACVYFQEML-DKGIRPPGQLFSNLKEALVEGGRITLAQEVTQR 529

Query: 524 M 524
           +
Sbjct: 530 L 530



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 1/253 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M    ++  V  + +L+  + ++G   EA+  F+ MEE GC P    + ++I+ L    R
Sbjct: 285 MLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMER 344

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRG-WCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  +F   K+   P  +   N V G +CRA     A ++  EM+ +GI PN  TY I
Sbjct: 345 LDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++ L +  +I  A+++F  M   GCEP   T+  ++ +     R +  L+V+ QMK  G
Sbjct: 405 ILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKG 464

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                  ++ LI+  C D +LE+A      M+ KG  P    F+ +   + + G +  A 
Sbjct: 465 VLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQ 524

Query: 413 RMYGKMKDLKCEP 425
            +  +++ L+  P
Sbjct: 525 EVTQRLEMLRRTP 537


>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 547

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 214/411 (52%), Gaps = 13/411 (3%)

Query: 107 ISPSTVRHVIEK--SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           +SPS V  V+++  + GV         LSFF W   +  F ++ + Y+ +I   GK++QF
Sbjct: 121 VSPSLVVEVLKRLSNAGV-------IALSFFTWAEKQKGFKYNTESYNALIEALGKIKQF 173

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
            L    ++ MKSR + +  DTF+++ RR+ RA    EA+ AF RMEE+G   +   F+ +
Sbjct: 174 KLIRSLVNEMKSRKL-LNKDTFALISRRHARARKVEEAIEAFERMEEFGFKLETSDFNRL 232

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +  LC+ R   +A   FD +K + F PD+  YT L+ GW +  N+   + V+ EMK  G 
Sbjct: 233 LDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGF 292

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V TY I+I A C+  +   A ++F EM    C+P    +  L+       R  + L+
Sbjct: 293 EPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALE 352

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            + + K  G   +  TYN L+  +C   +++DA +V++ M +    PN+ T+++I   + 
Sbjct: 353 FFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLI 412

Query: 404 KLGDVNGAHRMYGKMK-DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           K    N A+  + KM  +  CEP   TY I+++MF      D+  ++  +M+   V P +
Sbjct: 413 KARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGM 472

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           + Y  LIT  C       A KY +EM+ +  ++P + ++  + Q L   G+
Sbjct: 473 HMYSDLITSLCHKNKLGEACKYFQEML-DAGIRPPAKMFSNLKQALLDEGK 522



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 2/257 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK    E  V T+ IL+  Y +A     A+  F+ ME   C P    +  +I+ L  ++R
Sbjct: 287 MKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKR 346

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            SEA  FF+  K   F P+   Y +LV  +C +  I +A +V  EM+     PN  TY I
Sbjct: 347 LSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDI 406

Query: 293 VIDALCRCGQITRAHDVFAEML-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           ++  L +  +   A+  F +M  E GCEP   T+  ++R+     R +   QV++QMK  
Sbjct: 407 ILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAK 466

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G       Y+ LI   C   KL +A K    M+  G  P A  F+ + + +   G  + A
Sbjct: 467 GVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEA 526

Query: 412 HRMYGKMKDLKCEPNTV 428
             +  K+  L+  P  V
Sbjct: 527 LNLARKINKLRGTPLVV 543



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 163/360 (45%), Gaps = 1/360 (0%)

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
           H   L++  +++++      +++R   AG+ A +   +   ++ G   +  +++ +I  L
Sbjct: 109 HADKLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQK-GFKYNTESYNALIEAL 167

Query: 229 CRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            + ++    +S  + +K +   +   +  + R   RA  + EA   F  M+  G +    
Sbjct: 168 GKIKQFKLIRSLVNEMKSRKLLNKDTFALISRRHARARKVEEAIEAFERMEEFGFKLETS 227

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            ++ ++D LC+   + +A+ VF +M +    P+  ++  L+    K     ++ +VY +M
Sbjct: 228 DFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEM 287

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           K  G E D +TY  LI  +CK  K + AI++ + M  K C P    +  +   +     +
Sbjct: 288 KYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRL 347

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A   + + K     P   TYN L+  +  S   D   ++  EM ++   PN  TY I+
Sbjct: 348 SEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDII 407

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +         N AY   ++M  E   +P  S YE++++      ++   +++ ++M  +G
Sbjct: 408 LHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKG 467



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 2/207 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P +Y  +IN  G  ++   A  F +  KS        T++ LV  Y  +    +A    
Sbjct: 330 TPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVI 389

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCR 264
           + M ++   P+   + I++  L + RR +EA   F  + ++   EP V  Y  +VR +C 
Sbjct: 390 DEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCN 449

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +  A++V+ +MK  G+ P ++ YS +I +LC   ++  A   F EML+ G  P +  
Sbjct: 450 EDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKM 509

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRL 351
           F+NL +  +   + ++ L +  ++ +L
Sbjct: 510 FSNLKQALLDEGKNDEALNLARKINKL 536



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 8/244 (3%)

Query: 291 SIVIDALCR---CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
           S+V++ L R    G I  +   +AE  + G + N+ ++N L+    K  + + +  + N+
Sbjct: 124 SLVVEVLKRLSNAGVIALSFFTWAEK-QKGFKYNTESYNALIEALGKIKQFKLIRSLVNE 182

Query: 348 MK-RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           MK R     DT  +  +   H +  K+E+AI+    M   G     S FN +   + K  
Sbjct: 183 MKSRKLLNKDT--FALISRRHARARKVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSR 240

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V  A++++ KMK  +  P+  +Y IL++ +    +   + ++  EM+ +  EP+V TY 
Sbjct: 241 HVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYG 300

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           ILI+ YC    ++ A +   EM  + C KP   VY  ++  L    +L +  E  E+   
Sbjct: 301 ILISAYCKAKKYDAAIELFHEMEAKNC-KPTPHVYCTLINGLGSEKRLSEALEFFERFKS 359

Query: 527 RGFT 530
            GFT
Sbjct: 360 CGFT 363


>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
 gi|238014984|gb|ACR38527.1| unknown [Zea mays]
 gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
          Length = 623

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 195/381 (51%), Gaps = 1/381 (0%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           +    FF W   +  + H  D Y  M+++ GK +QFDL    I  M      +++ T + 
Sbjct: 178 VAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTK 237

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++RR   A   ++A+ AF++M+ +G A D  A ++++  LC++R    A+  F +LK   
Sbjct: 238 VMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTI 297

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD   +  LV GWC+A  + EA    +EM+  G  P+V TY+ +I+A C          
Sbjct: 298 PPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDG 357

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM   GC PN IT+  +M    KA RT++ L  ++++K+ GC  D   YN LI   C
Sbjct: 358 ILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILC 417

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           + G+L+DA  V+  M R G +PN +TFN +            A ++  +M++  C P+  
Sbjct: 418 RAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIK 477

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY  L+++    K    +L L   M   ++ P+ +TY +L+   C  G    +  ++ EM
Sbjct: 478 TYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEM 537

Query: 489 IEEKCLKPGSSVYEMVLQQLR 509
           +  K   P  + +++VL++L+
Sbjct: 538 V-LKGFTPQQATFDLVLEKLK 557


>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 525

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 230/476 (48%), Gaps = 15/476 (3%)

Query: 63  FHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGV 122
           F SL++  H+   + S     +L  D   P L    S++ + H      + H +      
Sbjct: 6   FSSLVRALHQTPKSQSFRIFSTLLHDPPSPELVNEISRVLSDHRNPKDDLEHTLAAYSPR 65

Query: 123 RHGIPLLQVLS-----------FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
                + QVL            FF W    P+F HS + YH ++ + G  +QF L W F+
Sbjct: 66  VSSNLVEQVLKRCKNLGFPAHRFFLWAKRIPDFEHSLESYHILVEILGCSKQFALLWDFL 125

Query: 172 DLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
              +  N  EIT   F I+ R Y RA L +EA  AFNRM E+G  P       ++  LC 
Sbjct: 126 IEAREYNYFEITSKVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCD 185

Query: 231 KRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           ++  + AQ FFD  K     P    Y+ LVRGW R  + S A +VF EM       ++  
Sbjct: 186 RKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLA 245

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ ++DALC+ G +  A+ +F EM  +G +P++ +F   +  +  AS      QV ++MK
Sbjct: 246 YNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMK 305

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           R     +  T+N +I   CK+ K++DA  +L+ M++KG NP+  T+N I        +VN
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A ++  +M   KC P+  TYN+++++       D V ++ + M E +  P V TY ++I
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMI 425

Query: 470 -TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             +    G    A +Y   MI+E  + P S+  EM+  +L   GQ+   + L  KM
Sbjct: 426 HGLVRKKGKLEEACRYFEMMIDEG-IPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480


>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 565

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 225/437 (51%), Gaps = 9/437 (2%)

Query: 90  TIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD 149
           T+P   +  +  +   S+SP  V  V++       GI     L+FF W   +  FV++ D
Sbjct: 126 TLPEPRVPAALDALGASVSPQLVAEVLKNLSNA--GI---LALAFFRWAERQQGFVYTAD 180

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            +H +I   GK++QF L W  ++ M+ R + ++ DTF ++VRRY RA    EAV  F +M
Sbjct: 181 SFHNLIEALGKIKQFRLVWSLVEAMRCRGL-LSKDTFRLIVRRYARARKVKEAVETFEKM 239

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGN 267
             +G   D   ++ +I +L + ++  +A + F  +K   +F PD+  YT L+ GW    +
Sbjct: 240 AGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKD 299

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +   + V++EM  AG+QP+V  Y ++I + C+ G+   A  VF EM   GC P+   +  
Sbjct: 300 LLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCM 359

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+       R ++ L+ +   K  G   +  T N ++  +C+  K + A K+++ M + G
Sbjct: 360 LINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSG 419

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN+ T+++I   + K   +  A+ ++  M    CEP   TY +++ MF +++  D+ L
Sbjct: 420 IGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVAL 479

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           K+  +M+E  V P ++ +  LI   C       A  Y +EM+ ++ ++P   ++  + + 
Sbjct: 480 KVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEML-DRGIRPPGQLFSNLKEA 538

Query: 508 LRRAGQLQKHEELVEKM 524
           L   G++   +E+  K+
Sbjct: 539 LIEGGRISLAQEMALKL 555



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 1/253 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M    ++  V  + +L+  + ++G   EA+  F  ME  GC P    + ++I+ L  + R
Sbjct: 310 MLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEER 369

Query: 234 ASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  +F+ S    F  +V     +V  +CR+     A ++  EM+ +GI PN  TY I
Sbjct: 370 LDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDI 429

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++  L +  +I  A++VF  M + GCEP   T+  ++ +     R +  L+V+NQMK  G
Sbjct: 430 ILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKG 489

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                  ++ LI+  C + +LE+A      M+ +G  P    F+ +   + + G ++ A 
Sbjct: 490 VLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQ 549

Query: 413 RMYGKMKDLKCEP 425
            M  K+ +L+  P
Sbjct: 550 EMALKLDELRKTP 562


>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
 gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
          Length = 602

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 228/440 (51%), Gaps = 9/440 (2%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           +P L L   +       S   +R+ + +    R G   +    FF W + +P + H  + 
Sbjct: 65  VPKLELALQE-------SGVVLRNGLTERVLNRCGDAGILAYKFFVWASKQPCYRHCYEN 117

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  MI +  K++QF   W  ++ M+  N V IT + F +++RR+  + +  +A+   + M
Sbjct: 118 YKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDEM 177

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
            +YGC PD+  F  ++  LC+     EA S F+ ++ +F P +  +T L+ GWC+ G + 
Sbjct: 178 PKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFSPSLKHFTCLLYGWCKEGKLL 237

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ V  +M+ AG +P++  Y+ ++      G++  A D+  E+   GC+PN+ ++  L+
Sbjct: 238 EAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTILI 297

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +      + ++ ++V+ +M+R GC+AD +TY  L+   CK   ++   ++L SM++KG  
Sbjct: 298 QALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHM 357

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+  +     K  ++     + G+M+ + C P+   YN+++++       +  +  
Sbjct: 358 PNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACKLGEVNAGVDA 417

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS-SVYEMVLQQL 508
             EME + + P ++T+ I+I  + G G+   A +Y +EM+E   L      + + +L  L
Sbjct: 418 WNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLLSSRQYGILKDLLNAL 477

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            R  +L+  ++L   +V +G
Sbjct: 478 LRGEKLELAKDLWSCIVTKG 497


>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 522

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 212/412 (51%), Gaps = 20/412 (4%)

Query: 131 VLSFFNWVTARPEFVHSP--DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            LS  N V   P     P  D Y  +++  G+  QFD AW  + +  + +   T  TF++
Sbjct: 95  ALSLLNAVRLHPSVSSPPNADAYDAVVDALGRAHQFDAAWRLV-VEAAADGAATPRTFAV 153

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           L RRYV AGL  +AV AF+ ME + G  PD   F+ ++  LC+ +    A   F+  K K
Sbjct: 154 LARRYVAAGLTRQAVRAFDDMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYK 213

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ----- 302
           +EP+  +YT L+ GWC+      A++  ++M   GI+PN+ TY+I+++ +CR        
Sbjct: 214 YEPNEKMYTILIYGWCKVNRSDMAQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDN 273

Query: 303 -----ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
                +  A ++  EM + G EP+  +++ ++ V+ +A + E  L ++  MK  G     
Sbjct: 274 RFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTV 333

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TY  +I C    G+LEDA  +L  MV +G  P+ +T+N  F+      DV+GA  +Y K
Sbjct: 334 ATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNK 393

Query: 418 MKDLKCEPNTV---TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           MK   C P      +YNIL+ MF      + V++L  +M E  V P++++Y +L+  +C 
Sbjct: 394 MK-APCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCA 452

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
              W  A ++  EMIE+  L P    +E   + L +A  L+    L +K VD
Sbjct: 453 KEKWREACQFFMEMIEKGFL-PQKITFETPYRGLIQADMLRTWRRL-KKRVD 502


>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
 gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
          Length = 613

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 231/491 (47%), Gaps = 16/491 (3%)

Query: 32  NEDDDGDCVTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTI 91
           N  DDG C    +   D  F+ P E  +S++  S        +  P   +  S + D   
Sbjct: 100 NPKDDGSCA-GLDDEEDDIFVLPTEPNVSDERRSQSSTSRSLSIRPGFPATAS-HEDAEF 157

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVR-HGIPLLQVLS-----------FFNWVT 139
            +     S+I +A   SP  +   ++  C VR  G  + ++L+           FF WV 
Sbjct: 158 EADIDEVSRILSARFASPEAIMIAMD-CCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVG 216

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            +  + H  D Y  M+++ GK +QFDL W  I+ M      +++ T + ++RR   A   
Sbjct: 217 TQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRW 276

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLV 259
            EA+ AF++M+ +G   D  A ++++  LC++R    A+  F  L+    PD   +  LV
Sbjct: 277 TEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLV 336

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            GWC+A  + EA     EMK  G  P+V TY+ +++A C        + +  EM +  C 
Sbjct: 337 HGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCP 396

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN +T+  LM    KA RT + L  ++++K  G   D   YN LI    + G+LEDA  V
Sbjct: 397 PNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSV 456

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           +  M   G  PN +TFN +            A ++  KM++  C P+  TY  L+++   
Sbjct: 457 VEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK 516

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +   ++L L   M   ++ P+ +TY +L++  C  G    +  ++ EM+  K   P   
Sbjct: 517 RQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMV-SKGFAPKQE 575

Query: 500 VYEMVLQQLRR 510
            +++V+++L +
Sbjct: 576 TFDLVMEKLEK 586



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 2/240 (0%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +Y +++D L +  Q      +  +M+EVG   + +T   +MR    ASR  + +  +++M
Sbjct: 227 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 286

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            R G   DT   N L+D  CK+  ++ A  V   + R    P+ ++FN +     K   +
Sbjct: 287 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWCKARML 345

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A     +MK     P+ VTY  L++ +   K    V  L  EM +    PNV TY IL
Sbjct: 346 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTIL 405

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +      G    A     + ++E  + P +S Y  ++  L RAG+L+    +VE+M   G
Sbjct: 406 MHALGKAGRTREALDTF-DKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 464


>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
          Length = 554

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 231/491 (47%), Gaps = 16/491 (3%)

Query: 32  NEDDDGDCVTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTI 91
           N  DDG C    +   D  F+ P E  +S++  S        +  P   +  S + D   
Sbjct: 41  NPKDDGSCA-GLDDEEDDIFVLPTEPNVSDERRSQSSTSRSLSIRPGFPATAS-HEDAEF 98

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVR-HGIPLLQVLS-----------FFNWVT 139
            +     S+I +A   SP  +   ++  C VR  G  + ++L+           FF WV 
Sbjct: 99  EADIDEVSRILSARFASPEAIMIAMD-CCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVG 157

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            +  + H  D Y  M+++ GK +QFDL W  I+ M      +++ T + ++RR   A   
Sbjct: 158 TQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRW 217

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLV 259
            EA+ AF++M+ +G   D  A ++++  LC++R    A+  F  L+    PD   +  LV
Sbjct: 218 TEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLV 277

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            GWC+A  + EA     EMK  G  P+V TY+ +++A C        + +  EM +  C 
Sbjct: 278 HGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCP 337

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN +T+  LM    KA RT + L  ++++K  G   D   YN LI    + G+LEDA  V
Sbjct: 338 PNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSV 397

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           +  M   G  PN +TFN +            A ++  KM++  C P+  TY  L+++   
Sbjct: 398 VEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK 457

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +   ++L L   M   ++ P+ +TY +L++  C  G    +  ++ EM+  K   P   
Sbjct: 458 RQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMV-SKGFAPKQE 516

Query: 500 VYEMVLQQLRR 510
            +++V+++L +
Sbjct: 517 TFDLVMEKLEK 527



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 2/240 (0%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +Y +++D L +  Q      +  +M+EVG   + +T   +MR    ASR  + +  +++M
Sbjct: 168 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 227

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            R G   DT   N L+D  CK+  ++ A  V   + R    P+ ++FN +     K   +
Sbjct: 228 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWCKARML 286

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A     +MK     P+ VTY  L++ +   K    V  L  EM +    PNV TY IL
Sbjct: 287 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTIL 346

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +      G    A     + ++E  + P +S Y  ++  L RAG+L+    +VE+M   G
Sbjct: 347 MHALGKAGRTREALDTF-DKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 405


>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Brachypodium distachyon]
          Length = 547

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 210/396 (53%), Gaps = 4/396 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L+FF W   +  F ++ + +H +I   GK++QF L W  ++ M+ R + ++ DTF ++V
Sbjct: 144 ALAFFRWAERQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCRGL-LSKDTFRLIV 202

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK--DKF 248
           RRY RA    EAV  F +M  +G   D   ++ +I +L + ++  +A + F  +K   +F
Sbjct: 203 RRYARARKVKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRF 262

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD+  YT L+ GW    ++   + V++EM  AGI+P+V  Y  +I + C+ G+   A  
Sbjct: 263 VPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIK 322

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           VF EM   GC P+   +  L+       R ++ L+ +   K  G   +  T N ++  +C
Sbjct: 323 VFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYC 382

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           +  K + A K+++ M + G  PNA T+++I + + K   +  A+ ++ +M    CEP   
Sbjct: 383 RSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLN 442

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY +++ MF +++  DM LK+ K+M+E  V P ++ +  LI   C       A  Y +EM
Sbjct: 443 TYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEM 502

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           + +K ++P   ++  + + L   G++   +++  K+
Sbjct: 503 L-DKGIRPPGQLFSNLKEALIEGGRISLAQDMALKL 537



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 1/253 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M    ++  V  +  L+  + ++G   EA+  F  ME  GC P    + ++I+ L  + R
Sbjct: 292 MLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEER 351

Query: 234 ASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  +F+ S    F  +V     +V  +CR+     A ++  EM+  GI PN  TY I
Sbjct: 352 LDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDI 411

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++  L +  +I  A++VF  M   GCEP   T+  ++ +     R +  L+V+ QMK  G
Sbjct: 412 ILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKG 471

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                  ++ LI+  C + +LE+A      M+ KG  P    F+ +   + + G ++ A 
Sbjct: 472 VLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQ 531

Query: 413 RMYGKMKDLKCEP 425
            M  K+  L+  P
Sbjct: 532 DMALKLDTLRKTP 544


>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 232/443 (52%), Gaps = 14/443 (3%)

Query: 84  SLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPE 143
           S NP+  I SL  G         +SP+ +  V++K             LSFF W   +  
Sbjct: 102 SKNPNSCIESLLDG-----APMELSPALIVEVLKKLSNAG-----FLALSFFRWAEKQKG 151

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F H+ + Y+ +I   GK++QF++ W+ +  MK + + ++ +TF+++ RRY RA    EAV
Sbjct: 152 FKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKVKEAV 210

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGW 262
            +F +ME++G       F+ ++  LC+ R   +AQ  FD +K  +F+PD+  YT L+ GW
Sbjct: 211 ESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGW 270

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            +  N+ +   V+REM+  G +P+V T+ I+I+A C+  +   A  +F EM     +P+ 
Sbjct: 271 GQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSP 330

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             F  L+       R ++ L+ + Q+K  G   +  TYN ++  +C   K+  A ++++ 
Sbjct: 331 HVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDE 390

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSK 441
           M + G  PN+ T+++I   + K      A+ ++ +M ++  CEP   TY+I+++MF   +
Sbjct: 391 MRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEE 450

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             DM +++  EM+   V P ++ +  LI   C      +A  Y +EM++   ++P ++++
Sbjct: 451 RVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVG-IRPPATMF 509

Query: 502 EMVLQQLRRAGQLQKHEELVEKM 524
             + Q L   G+      + EK+
Sbjct: 510 SNLKQALLDDGRKDTALLMAEKI 532



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 126/254 (49%), Gaps = 2/254 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+    E  V TF IL+  + +A    EA+  F+ ME     P    F  +I+ L  ++R
Sbjct: 286 MRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKR 345

Query: 234 ASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  FF+ LK   F P+   Y  +V  +C +  ++ A R+  EM+ +G+ PN  TY I
Sbjct: 346 LKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDI 405

Query: 293 VIDALCRCGQITRAHDVFAEM-LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           ++  L +  +   A+ VF  M  E GCEP   T++ ++R+     R +  +Q++++MK  
Sbjct: 406 ILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAK 465

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G       ++ LI+  C + KLEDA      M+  G  P A+ F+ + + +   G  + A
Sbjct: 466 GVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTA 525

Query: 412 HRMYGKMKDLKCEP 425
             M  K+K L+  P
Sbjct: 526 LLMAEKIKKLRKAP 539



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 102/207 (49%), Gaps = 2/207 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP ++  +IN  G  ++   A  F + +K         T++ +V  Y  +   A A    
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCR 264
           + M + G  P+   + I++  L + R++ EA S F  +  +   EP +  Y  ++R +C 
Sbjct: 389 DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +  A +++ EMK  G+ P ++ +S +I++LC   ++  A   F EML+VG  P +  
Sbjct: 449 EERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATM 508

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRL 351
           F+NL +  +   R +  L +  ++K+L
Sbjct: 509 FSNLKQALLDDGRKDTALLMAEKIKKL 535


>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 232/443 (52%), Gaps = 14/443 (3%)

Query: 84  SLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPE 143
           S NP+  I SL  G         +SP+ +  V++K             LSFF W   +  
Sbjct: 102 SKNPNSCIESLLDG-----APMELSPALIVEVLKKLSNAG-----FLALSFFRWAEKQKG 151

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F H+ + Y+ +I   GK++QF++ W+ +  MK + + ++ +TF+++ RRY RA    EAV
Sbjct: 152 FKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKVKEAV 210

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGW 262
            +F +ME++G       F+ ++  LC+ R   +AQ  FD +K  +F+PD+  YT L+ GW
Sbjct: 211 ESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGW 270

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            +  N+ +   V+REM+  G +P+V T+ I+I+A C+  +   A  +F EM     +P+ 
Sbjct: 271 GQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSP 330

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             F  L+       R ++ L+ + Q+K  G   +  TYN ++  +C   K+  A ++++ 
Sbjct: 331 HVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDE 390

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSK 441
           M + G  PN+ T+++I   + K      A+ ++ +M ++  CEP   TY+I+++MF   +
Sbjct: 391 MRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEE 450

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             DM +++  EM+   V P ++ +  LI   C      +A  Y +EM++   ++P ++++
Sbjct: 451 RVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVG-IRPPATMF 509

Query: 502 EMVLQQLRRAGQLQKHEELVEKM 524
             + Q L   G+      + EK+
Sbjct: 510 SNLKQALLDDGRKDTALLMAEKI 532



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 2/254 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+    E  V TF IL+  + +A    EA+  F+ ME     P    F  +I+ L  ++R
Sbjct: 286 MRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKR 345

Query: 234 ASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  FF+ LK   F P+   Y  +V  +C +  ++ A R+  EM+ +G+ PN  TY I
Sbjct: 346 LKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDI 405

Query: 293 VIDALCRCGQITRAHDVFAEM-LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           ++  L +  +   A+ VF  M  E GCEP   T++ ++R+     R +  +Q++++MK  
Sbjct: 406 ILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAK 465

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G       ++ LI+  C + KLEDA      M+  G  P A+ F+ + + +   G  + A
Sbjct: 466 GVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTA 525

Query: 412 HRMYGKMKDLKCEP 425
             M  K+  L+  P
Sbjct: 526 LLMAEKIXKLRKAP 539



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 2/207 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP ++  +IN  G  ++   A  F + +K         T++ +V  Y  +   A A    
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCR 264
           + M + G  P+   + I++  L + R++ EA S F  +  +   EP +  Y  ++R +C 
Sbjct: 389 DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +  A +++ EMK  G+ P ++ +S +I++LC   ++  A   F EML+VG  P +  
Sbjct: 449 EERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATM 508

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRL 351
           F+NL +  +   R +  L +  ++ +L
Sbjct: 509 FSNLKQALLDDGRKDTALLMAEKIXKL 535


>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 231/491 (47%), Gaps = 16/491 (3%)

Query: 32   NEDDDGDCVTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTI 91
            N  DDG C    +   D  F+ P E  +S++  S        +  P   +  S + D   
Sbjct: 1361 NPKDDGSCA-GLDDEEDDIFVLPTEPNVSDERRSQSSTSRSLSIRPGFPATAS-HEDAEF 1418

Query: 92   PSLSLGFSQISTAHSISPSTVRHVIEKSCGVR-HGIPLLQVLS-----------FFNWVT 139
             +     S+I +A   SP  +   ++  C VR  G  + ++L+           FF WV 
Sbjct: 1419 EADIDEVSRILSARFASPEAIMIAMD-CCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVG 1477

Query: 140  ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
             +  + H  D Y  M+++ GK +QFDL W  I+ M      +++ T + ++RR   A   
Sbjct: 1478 TQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRW 1537

Query: 200  AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLV 259
             EA+ AF++M+ +G   D  A ++++  LC++R    A+  F  L+    PD   +  LV
Sbjct: 1538 TEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLV 1597

Query: 260  RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             GWC+A  + EA     EMK  G  P+V TY+ +++A C        + +  EM +  C 
Sbjct: 1598 HGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCP 1657

Query: 320  PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            PN +T+  LM    KA RT + L  ++++K  G   D   YN LI    + G+LEDA  V
Sbjct: 1658 PNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSV 1717

Query: 380  LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            +  M   G  PN +TFN +            A ++  KM++  C P+  TY  L+++   
Sbjct: 1718 VEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK 1777

Query: 440  SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
             +   ++L L   M   ++ P+ +TY +L++  C  G    +  ++ EM+  K   P   
Sbjct: 1778 RQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMV-SKGFAPKQE 1836

Query: 500  VYEMVLQQLRR 510
             +++V+++L +
Sbjct: 1837 TFDLVMEKLEK 1847



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 2/242 (0%)

Query: 289  TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            +Y +++D L +  Q      +  +M+EVG   + +T   +MR    ASR  + +  +++M
Sbjct: 1488 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1547

Query: 349  KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             R G   DT   N L+D  CK+  ++ A  V   + R    P+ ++FN +     K   +
Sbjct: 1548 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWCKARML 1606

Query: 409  NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
              A     +MK     P+ VTY  L++ +   K    V  L  EM +    PNV TY IL
Sbjct: 1607 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTIL 1666

Query: 469  ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +      G    A     + ++E  + P +S Y  ++  L RAG+L+    +VE+M   G
Sbjct: 1667 MHALGKAGRTREALDTF-DKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 1725

Query: 529  FT 530
              
Sbjct: 1726 IA 1727


>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 231/491 (47%), Gaps = 16/491 (3%)

Query: 32   NEDDDGDCVTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTI 91
            N  DDG C    +   D  F+ P E  +S++  S        +  P   +  S + D   
Sbjct: 1320 NPKDDGSCA-GLDDEEDDIFVLPTEPNVSDERRSQSSTSRSLSIRPGFPATAS-HEDAEF 1377

Query: 92   PSLSLGFSQISTAHSISPSTVRHVIEKSCGVR-HGIPLLQVLS-----------FFNWVT 139
             +     S+I +A   SP  +   ++  C VR  G  + ++L+           FF WV 
Sbjct: 1378 EADIDEVSRILSARFASPEAIMIAMD-CCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVG 1436

Query: 140  ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
             +  + H  D Y  M+++ GK +QFDL W  I+ M      +++ T + ++RR   A   
Sbjct: 1437 TQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRW 1496

Query: 200  AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLV 259
             EA+ AF++M+ +G   D  A ++++  LC++R    A+  F  L+    PD   +  LV
Sbjct: 1497 TEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLV 1556

Query: 260  RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             GWC+A  + EA     EMK  G  P+V TY+ +++A C        + +  EM +  C 
Sbjct: 1557 HGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCP 1616

Query: 320  PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            PN +T+  LM    KA RT + L  ++++K  G   D   YN LI    + G+LEDA  V
Sbjct: 1617 PNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSV 1676

Query: 380  LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            +  M   G  PN +TFN +            A ++  KM++  C P+  TY  L+++   
Sbjct: 1677 VEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK 1736

Query: 440  SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
             +   ++L L   M   ++ P+ +TY +L++  C  G    +  ++ EM+  K   P   
Sbjct: 1737 RQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMV-SKGFAPKQE 1795

Query: 500  VYEMVLQQLRR 510
             +++V+++L +
Sbjct: 1796 TFDLVMEKLEK 1806



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 2/242 (0%)

Query: 289  TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            +Y +++D L +  Q      +  +M+EVG   + +T   +MR    ASR  + +  +++M
Sbjct: 1447 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1506

Query: 349  KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             R G   DT   N L+D  CK+  ++ A  V   + R    P+ ++FN +     K   +
Sbjct: 1507 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL-RGTIPPDENSFNTLVHGWCKARML 1565

Query: 409  NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
              A     +MK     P+ VTY  L++ +   K    V  L  EM +    PNV TY IL
Sbjct: 1566 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTIL 1625

Query: 469  ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +      G    A     + ++E  + P +S Y  ++  L RAG+L+    +VE+M   G
Sbjct: 1626 MHALGKAGRTREALDTF-DKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 1684

Query: 529  FT 530
              
Sbjct: 1685 IA 1686


>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 482

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 201/395 (50%), Gaps = 4/395 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L FF  ++  P + H    +   I++  ++R F   W  +  M+S  +  +  TF+I+
Sbjct: 74  KALHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAII 133

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
             RY   G    AV  F  M EYGC  D  +F+ ++ +LC+ +R   A + F +LK KF+
Sbjct: 134 AERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFK 193

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
            D + Y  +V GWC      +A  + +EM   G+ PN+ TY+I+++   R GQ   A   
Sbjct: 194 ADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGF 253

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F EM +  C+ + +T+ +++         ++   V+NQM + G      T+N LI   CK
Sbjct: 254 FLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCK 313

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
              +E+AI +   MV++G  PN+ T+N++ R +  +G++  A  +  +M+D  CEPN  T
Sbjct: 314 KDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQT 373

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN---AYKYIR 486
           YNIL++ F  +   +  L L ++M   +  PN++TY ILI       + +N   A K + 
Sbjct: 374 YNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLV 433

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           EM++   L P    +  VL  L   G     +E++
Sbjct: 434 EMVDRGFL-PRKLTFNRVLDGLLLTGNQDFAKEIL 467



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 2/249 (0%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   + P+  T++I+ +     G+  RA  VF  M E GC  +  +FN ++ V  K+ R
Sbjct: 118 MRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKR 177

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E    ++  +K    +AD ++YN +++  C   +   A+++L  MV +G  PN +T+N+
Sbjct: 178 VEMAYNLFKALKG-KFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNI 236

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +     + G  N A   + +MK  KC+ + VTY  ++              +  +M ++ 
Sbjct: 237 MLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDG 296

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V T+  LI + C      NA     EM++   + P S  Y +V++ L   G++Q+ 
Sbjct: 297 VLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYV-PNSITYNLVIRGLCHVGEMQRA 355

Query: 518 EELVEKMVD 526
            EL+E+M D
Sbjct: 356 MELMERMED 364


>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g65820
 gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 205/400 (51%), Gaps = 8/400 (2%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           +P L L  ++  +   + P  +  V+ + CG    +       FF W   +P + HS ++
Sbjct: 97  VPKLELALNE--SGVELRPGLIERVLNR-CGDAGNLGY----RFFVWAAKQPRYCHSIEV 149

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  M+ +  K+RQF   W  I+ M+  N + I  + F +LV+R+  A +  +A+   + M
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 209

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
            ++G  PD+  F  ++  LC+     +A   F+ ++ +F  ++  +T+L+ GWCR G + 
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMM 269

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ V  +M  AG +P++  Y+ ++      G++  A+D+  +M   G EPN+  +  L+
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   K  R E+ ++V+ +M+R  CEAD +TY  L+   CK GK++    VL+ M++KG  
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  I     K         +  KM+ ++  P+   YN+++++          ++L
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
             EMEEN + P V+T+ I+I      G    A  + +EM+
Sbjct: 450 WNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 151/355 (42%), Gaps = 40/355 (11%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M     E  +  ++ L+  Y  AG  A+A      M   G  P+   ++++I  LC+  R
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   F  + + + E DV+ YT LV G+C+ G I +                     I
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC-------------------YI 378

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           V+D                +M++ G  P+ +T+ ++M  H K    E+ L++  +M+++ 
Sbjct: 379 VLD----------------DMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D   YN +I   CK G++++A+++ N M   G +P   TF ++   ++  G +  A 
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482

Query: 413 RMYGKM--KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRILI 469
             + +M  + L       T  +L+      K  +M   +   +  +   E NV ++ I I
Sbjct: 483 DHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWI 542

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
                 G+   A  Y  EMIE   + P    +  +++ L++    +   E+ EK+
Sbjct: 543 HALFSKGYEKEACSYCIEMIEMDFM-PQPDTFAKLMKGLKKLYNREFAGEITEKV 596



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 7/193 (3%)

Query: 171 IDLM-KSRNVEITVDT--FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           ++LM K R +E   D   +++++R   + G   EAV  +N MEE G +P    F I+I+ 
Sbjct: 412 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNL---VRGWCRAGNISEAERVFREMKMAGI- 283
           L  +    EA   F  +  +    V  Y  L   +    +   +  A+ V+  +   G  
Sbjct: 472 LASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGAC 531

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           + NV +++I I AL   G    A     EM+E+   P   TF  LM+   K    E   +
Sbjct: 532 ELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGE 591

Query: 344 VYNQMKRLGCEAD 356
           +  +++ +  E +
Sbjct: 592 ITEKVRNMAAERE 604


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 214/402 (53%), Gaps = 6/402 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           LS  + ++  P+ V    +   + + +GK++Q   A   +D M  R+    V T++IL+ 
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCD-SGKLKQ---AMEVLDRMLQRDCYPDVITYTILIE 247

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEP 250
              R     +A+   + M + GC PD + ++++++ +C++ R  EA  F + +     +P
Sbjct: 248 ATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +VI +  ++R  C  G   +AE++  +M   G  P+V T++I+I+ LCR G + RA D+ 
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M + GC+PNS+++N L+    K  + ++ ++   +M   GC  D +TYN ++   CKD
Sbjct: 368 EKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           GK+EDA+++LN +  KGC+P   T+N +   ++K G    A ++  +M+    +P+T+TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           + L+   +     D  +K   E E   V PN  T+  ++   C     + A  ++  MI 
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMIN 547

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
             C KP  + Y ++++ L   G  ++  EL+ ++ ++G   R
Sbjct: 548 RGC-KPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKR 588



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 173/338 (51%), Gaps = 3/338 (0%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+R + R G   +A      +E  G  PD I ++++IS  C+    + A S  D +  
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-- 198

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PDV+ Y  ++R  C +G + +A  V   M      P+V TY+I+I+A CR   + +A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQA 258

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +  EM + GC P+ +T+N L+    K  R ++ ++  N M   GC+ + IT+N ++  
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C  G+  DA K+L  M+RKG +P+  TFN++   + + G +  A  +  KM    C+PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPN 378

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           +++YN L+  F   K  D  ++  + M      P++ TY  ++T  C  G   +A + + 
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           ++  + C  P    Y  V+  L +AG+  K  +L+++M
Sbjct: 439 QLSSKGC-SPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 171/340 (50%), Gaps = 5/340 (1%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +R+ VR G   E       M  +G  PD I  + +I   CR  +  +A    + L+    
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 250 -PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDVI Y  ++ G+C+AG I+ A  V   M    + P+V TY+ ++ +LC  G++ +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V   ML+  C P+ IT+  L+    + S   + +++ ++M+  GC  D +TYN L++  C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G+L++AIK LN M   GC PN  T N+I R +   G    A ++   M      P+ V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+NIL+            + + ++M ++  +PN  +Y  L+  +C     + A +Y+  M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C  P    Y  +L  L + G+++   E++ ++  +G
Sbjct: 406 VSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 138/294 (46%), Gaps = 4/294 (1%)

Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           S     F S    F  + +   N +R   R G + E  +    M   G  P++   + +I
Sbjct: 85  SNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLI 144

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
              CR G+  +A  +   +   G  P+ IT+N ++  + KA      L V   + R+   
Sbjct: 145 RGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVS 201

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D +TYN ++   C  GKL+ A++VL+ M+++ C P+  T+ ++     +   V  A ++
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKL 261

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +M+D  C P+ VTYN+L+         D  +K   +M  +  +PNV T+ I++   C 
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G W +A K + +M+  K   P    + +++  L R G L +  +++EKM   G
Sbjct: 322 TGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 4/234 (1%)

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           L R G++         M+  G  P+ I    L+R   +  +T K  ++   ++  G   D
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            ITYN +I  +CK G++ +A+ VL+ M     +P+  T+N I R +   G +  A  +  
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M    C P+ +TY IL++           +KL  EM +    P+V TY +L+   C  G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             + A K++ +M    C +P    + ++L+ +   G+    E+L+  M+ +GF+
Sbjct: 289 RLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341


>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Glycine max]
          Length = 510

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 210/414 (50%), Gaps = 18/414 (4%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILV 190
           LS F++    P    S   +  +I+   KVRQFD+AW  I  M  R+ +  T  TF  L+
Sbjct: 85  LSLFHYAKTLPNPPLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLI 144

Query: 191 RRYVRAGLAAEAVHAFNRMEEYG---CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           RR + AGL  +AV AF+ ++ +      P    F +++  LC+      A   F+  K  
Sbjct: 145 RRLICAGLTRQAVRAFHDIDAFSETKTTPQD--FCVLLDTLCKYGHVRLAVEVFNKNKHT 202

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC------- 300
           F P V +YT L+ GWC+ G I  A+    EM   GI+PNV TY+++++ +CR        
Sbjct: 203 FPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEE 262

Query: 301 ---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
                I  A +VF +M E G EP+  +F+ L+ V+ +A + + VL   + MK  G   + 
Sbjct: 263 RFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNV 322

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + Y  +I C    G LEDA ++L  MVR G +P A+T+N  F+      D   A RM+ +
Sbjct: 323 VMYTSVIKCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKR 382

Query: 418 MK-DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           MK D  C P++ TY IL++MF       +V ++ ++M+E    P+++ Y +LI   C   
Sbjct: 383 MKEDGLCMPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQ 442

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            W  A  Y  EMIE   L P    +E + + L +A  L+    L +K+ +   T
Sbjct: 443 RWREACHYFVEMIENGFL-PLKGTFESLYRGLIQADMLRTWRRLKKKLDEESIT 495


>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g52640, mitochondrial; Flags: Precursor
 gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
 gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
 gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 229/466 (49%), Gaps = 14/466 (3%)

Query: 63  FHSLIKDHHRKNPNPS-SNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCG 121
           F +L+ D     P+P   N    +  D   P   L  + ++ +  +S + V  V+++   
Sbjct: 25  FSTLLHD----PPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKN 80

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN-VE 180
           +  G P  +   FF W    P+F HS + YH ++ + G  +QF L W F+   +  N  E
Sbjct: 81  L--GFPAHR---FFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFE 135

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
           I+   F I+ R Y RA L +EA  AFNRM E+G  P       ++  LC K+  + AQ F
Sbjct: 136 ISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF 195

Query: 241 FDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F   K     P    Y+ LVRGW R  + S A +VF EM       ++  Y+ ++DALC+
Sbjct: 196 FGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCK 255

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G +   + +F EM  +G +P++ +F   +  +  A       +V ++MKR     +  T
Sbjct: 256 SGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYT 315

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N +I   CK+ K++DA  +L+ M++KG NP+  T+N I        +VN A ++  +M 
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI-TMYCGMGHW 478
             KC P+  TYN+++++       D   ++ + M E +  P V TY ++I  +    G  
Sbjct: 376 RTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKL 435

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             A +Y   MI+E  + P S+  EM+  +L   GQ+   + L  KM
Sbjct: 436 EEACRYFEMMIDEG-IPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480


>gi|224149777|ref|XP_002336861.1| predicted protein [Populus trichocarpa]
 gi|222837028|gb|EEE75407.1| predicted protein [Populus trichocarpa]
          Length = 156

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/155 (63%), Positives = 122/155 (78%)

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           +L  M+ KGC PNASTFN +  C++K G+VN  HR+Y  MK+ K  PN  TYN LM+M  
Sbjct: 1   MLMLMIEKGCAPNASTFNTLIVCVAKFGNVNAVHRIYDIMKEFKYGPNAGTYNTLMKMHV 60

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
             KSTDMVLKLKKEM+EN++EPNVNTY++LITMYC M +W +AY+  REMIEEK LKP  
Sbjct: 61  ALKSTDMVLKLKKEMDENKIEPNVNTYKVLITMYCDMENWKDAYELCREMIEEKRLKPSL 120

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            VYEMVLQQL++AGQL+KH+ELV+ MVDRGF +RP
Sbjct: 121 QVYEMVLQQLKKAGQLKKHKELVKMMVDRGFVSRP 155



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 1/140 (0%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G  PN  T++ +I  + + G +   H ++  M E    PN+ T+N LM++HV    T+ V
Sbjct: 9   GCAPNASTFNTLIVCVAKFGNVNAVHRIYDIMKEFKYGPNAGTYNTLMKMHVALKSTDMV 68

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV-RKGCNPNASTFNMIFR 400
           L++  +M     E +  TY  LI  +C     +DA ++   M+  K   P+   + M+ +
Sbjct: 69  LKLKKEMDENKIEPNVNTYKVLITMYCDMENWKDAYELCREMIEEKRLKPSLQVYEMVLQ 128

Query: 401 CISKLGDVNGAHRMYGKMKD 420
            + K G +     +   M D
Sbjct: 129 QLKKAGQLKKHKELVKMMVD 148



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGN 267
           M E GCAP+   F+ +I  + +    +     +D +K+ K+ P+   Y  L++      +
Sbjct: 5   MIEKGCAPNASTFNTLIVCVAKFGNVNAVHRIYDIMKEFKYGPNAGTYNTLMKMHVALKS 64

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
                ++ +EM    I+PNV TY ++I   C       A+++  EM+E
Sbjct: 65  TDMVLKLKKEMDENKIEPNVNTYKVLITMYCDMENWKDAYELCREMIE 112


>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 628

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 217/427 (50%), Gaps = 9/427 (2%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           +P L L   +      + P     V+ + CG    +       F++W + +       D 
Sbjct: 80  VPKLELALRESGVV--VRPGLTERVLNR-CGDAGNL----AYRFYSWASKQSGHRLDHDA 132

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  MI +  ++RQF   W  I+ M+  N   IT   F IL+RR+  A +  +AV   + M
Sbjct: 133 YKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVQVLDEM 192

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             YGC PD+  F  ++  L +     EA S F+ L+ +++P V  +T+L+ GWC+ G + 
Sbjct: 193 PNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKHFTSLLYGWCKEGKLM 252

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ V  +MK AGI+P++  Y+ ++    +  ++  A+D+  EM   GCEPN+ ++  L+
Sbjct: 253 EAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLI 312

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   K  R E+  +V+ +M+R GC+AD +TY+ LI   CK GK++   ++L+ M+++G  
Sbjct: 313 QSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHF 372

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN   +  I     K  ++     +  +M+ + C P+   YN ++++          ++L
Sbjct: 373 PNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRL 432

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL-KPGSSVYEMVLQQL 508
             EME + + P+++T+ I+I  +   G    A +Y +EM+       P     + ++  L
Sbjct: 433 WNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLKELMNSL 492

Query: 509 RRAGQLQ 515
            RA +L+
Sbjct: 493 LRAEKLE 499


>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
 gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
          Length = 491

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 177/341 (51%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L FFN ++  P + H P  Y   I+++ ++R        +  M+S  +  T  TF+I+
Sbjct: 83  KALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAII 142

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
             RY  AG    AV  F  M ++GC  D  +F+ ++ +LC+ +R   A + F   K KF 
Sbjct: 143 AERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFR 202

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
            D + Y  +V GWC     ++A  + +EM   G+ PN+ +Y+ ++    R GQI  A D 
Sbjct: 203 ADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDF 262

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F EM +  CE + IT+  ++     A   ++  +V++ M + G      TYN  I   CK
Sbjct: 263 FLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCK 322

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
              +++AI +   MV KG  PN+ T+N++ R +   G++  A    G+MKD  CEPN  T
Sbjct: 323 KDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQT 382

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           YN++++ F      D  L L ++M   +  PN++TY ILI+
Sbjct: 383 YNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILIS 423


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 213/402 (52%), Gaps = 6/402 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           LS  + ++  P+ V    +   + + +GK++Q   A   +D M  R+    V T++IL+ 
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCD-SGKLKQ---AMEVLDRMLQRDCYPDVITYTILIE 247

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEP 250
              R      A+   + M + GC PD + ++++++ +C++ R  EA  F + +     +P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +VI +  ++R  C  G   +AE++  +M   G  P+V T++I+I+ LCR G + RA D+ 
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M + GC+PNS+++N L+    K  + ++ ++   +M   GC  D +TYN ++   CKD
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           GK+EDA+++LN +  KGC+P   T+N +   ++K G    A ++  +M+    +P+T+TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           + L+   +     D  +K   E E   + PN  T+  ++   C     + A  ++  MI 
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
             C KP  + Y ++++ L   G  ++  EL+ ++ ++G   +
Sbjct: 548 RGC-KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 172/338 (50%), Gaps = 3/338 (0%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+R + R G   +A      +E  G  PD I ++++IS  C+    + A S  D +  
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-- 198

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PDV+ Y  ++R  C +G + +A  V   M      P+V TY+I+I+A CR   +  A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +  EM + GC P+ +T+N L+    K  R ++ ++  N M   GC+ + IT+N ++  
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C  G+  DA K+L  M+RKG +P+  TFN++   + + G +  A  +  KM    C+PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           +++YN L+  F   K  D  ++  + M      P++ TY  ++T  C  G   +A + + 
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           ++  + C  P    Y  V+  L +AG+  K  +L+++M
Sbjct: 439 QLSSKGC-SPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 170/340 (50%), Gaps = 5/340 (1%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +R+ VR G   E       M  +G  PD I  + +I   CR  +  +A    + L+    
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 250 -PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDVI Y  ++ G+C+AG I+ A  V   M    + P+V TY+ ++ +LC  G++ +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V   ML+  C P+ IT+  L+    + S     +++ ++M+  GC  D +TYN L++  C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G+L++AIK LN M   GC PN  T N+I R +   G    A ++   M      P+ V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+NIL+            + + ++M ++  +PN  +Y  L+  +C     + A +Y+  M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C  P    Y  +L  L + G+++   E++ ++  +G
Sbjct: 406 VSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 4/294 (1%)

Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           S     + S+   F  + +   N +R   R G + E  +    M   G  P++   + +I
Sbjct: 85  SNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLI 144

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
              CR G+  +A  +   +   G  P+ IT+N ++  + KA      L V   + R+   
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVS 201

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D +TYN ++   C  GKL+ A++VL+ M+++ C P+  T+ ++     +   V  A ++
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +M+D  C P+ VTYN+L+         D  +K   +M  +  +PNV T+ I++   C 
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G W +A K + +M+  K   P    + +++  L R G L +  +++EKM   G
Sbjct: 322 TGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 4/234 (1%)

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           + R G++         M+  G  P+ I    L+R   +  +T K  ++   ++  G   D
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            ITYN +I  +CK G++ +A+ VL+ M     +P+  T+N I R +   G +  A  +  
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M    C P+ +TY IL++           +KL  EM +    P+V TY +L+   C  G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             + A K++ +M    C +P    + ++L+ +   G+    E+L+  M+ +GF+
Sbjct: 289 RLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341


>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
 gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
          Length = 528

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 211/410 (51%), Gaps = 18/410 (4%)

Query: 131 VLSFFNWVTARPEFVHS---PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
            LS  +     P FV++   PD Y  +++   + RQFD AW  + +  S +   +  +F+
Sbjct: 100 ALSLLHAARLHPSFVNTRPPPDAYDAVVDALARARQFDAAWRVV-VDASADGAASPRSFA 158

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           +L RRYV AG+  +AV AF+ ME + G   +   F+ ++  LC+ +    A   F+  K 
Sbjct: 159 VLARRYVAAGMTRQAVRAFDDMEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRKY 218

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ---- 302
           K+ P+  +YT L+ GWC+      A +  ++M   GI+PN+ TY+I+++ +CR       
Sbjct: 219 KYNPNEKMYTILIYGWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPD 278

Query: 303 ------ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
                 +  A DV  EM + G EP+  +++ ++ V+ +A + E  + ++  MK  G    
Sbjct: 279 YRFDRTVHSAEDVLKEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPT 338

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TY  +I C    G+LEDA  +L+ MV +G  P+ +T+N  F+      DV+GA ++Y 
Sbjct: 339 VATYTSVIKCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYN 398

Query: 417 KMKDLK--CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           KMK       P+  TYNIL+ MF        V  +  +M E+ V P++++Y +LI  +C 
Sbjct: 399 KMKQPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCA 458

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              W  A ++  EMIE+  L P    +E + + L +A  L+    L  ++
Sbjct: 459 SQKWREACQFFMEMIEKGFL-PQKITFETLYRGLIQADMLRTWRRLKRRV 507


>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 654

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 216/427 (50%), Gaps = 9/427 (2%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           +P L L   +      + P     V+ + CG    +       F++W + +       D 
Sbjct: 106 VPKLELALRESGVV--VRPGLTERVLSR-CGDAGNL----AYRFYSWASKQSGHRLDHDA 158

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  MI +  ++RQF   W  I+ M+  N   IT   F IL+RR+  A +  +AV   + M
Sbjct: 159 YKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVEVLDEM 218

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
            +YGC PD+  F  ++  LC+     EA S F+ ++ +++P V  +T+L+ GWC+ G + 
Sbjct: 219 PKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCKEGKLM 278

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ V  +MK  GI+P++  Y+ ++    + G++  A+D+  EM    CEPN+ ++  L+
Sbjct: 279 EAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLI 338

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   K  R E+  +++ +M+  GC+AD +TY+ LI   CK GK++   ++L+ M+++G  
Sbjct: 339 QSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHF 398

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN   +  I     K  ++     +  +M+ + C P+   YN ++++          ++L
Sbjct: 399 PNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQL 458

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL-KPGSSVYEMVLQQL 508
             EME + + P ++T+ I+I  +   G    A +Y +EM+       P     + ++  L
Sbjct: 459 WNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSL 518

Query: 509 RRAGQLQ 515
            RA +L+
Sbjct: 519 LRAEKLE 525



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/346 (19%), Positives = 135/346 (39%), Gaps = 46/346 (13%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ ++    +  +   A+  +  M+ +  E    ++++L++   +     EA   
Sbjct: 294 PDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRL 353

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--------------------- 244
           F  M+  GC  D + +S +IS  C+  +        D +                     
Sbjct: 354 FVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEK 413

Query: 245 ---------------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                          K    PD+ +Y  ++R  C+ G + E  +++ EM+ +G+ P + T
Sbjct: 414 KEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDT 473

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVG--CEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
           + I+I+     G +  A + F EM+  G    P   T   LM   ++A + E     +N 
Sbjct: 474 FVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNC 533

Query: 348 M-KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +    GC+ +   +   I      G +++A      M+ K   PN  TF  +   + KL 
Sbjct: 534 ITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLKKLY 593

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
           +   A  +  K++ +  +       I  +M+      D+  K K++
Sbjct: 594 NRQFAAEITEKVRKMAADR-----QITFKMYKRRGERDLKEKAKEK 634


>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
 gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
          Length = 551

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 206/396 (52%), Gaps = 4/396 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L+FF W   +  F ++ + +H +I   GK++QF L W  ++ M+ R + ++ DTF ++V
Sbjct: 148 ALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGL-LSKDTFKLIV 206

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK--DKF 248
           RRY RA    EAV  F +M  +G   +   ++ +I  L + ++  +AQ+ +  +K   KF
Sbjct: 207 RRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKF 266

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD+  YT L+ GW    ++   + +++EM  AGI+P+V  Y ++I A C+ G+   A  
Sbjct: 267 VPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIK 326

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           VF EM   GC P+   +  L+       R ++ L+ + Q K+ G   +  T N ++  +C
Sbjct: 327 VFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYC 386

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           +  K E A K+++ M      PN+ T+++I   + K      A+ ++ +M    CEP   
Sbjct: 387 RASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLN 446

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY +++ MF ++   DM L + K+M E  V P ++ +  LI   C       A  Y +EM
Sbjct: 447 TYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEM 506

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           + +K ++P   ++  + + L   G++   +E+  K+
Sbjct: 507 L-DKGIRPPGQLFSNLKEALVEGGRISLAQEMASKL 541



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 1/244 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V  + +L+  + ++G   EA+  F  ME  GC P    + ++I+ L  + R  EA  +F+
Sbjct: 305 VVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFE 364

Query: 243 SLKDKFEPDVIVYTNLVRG-WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
             K    P  +   N V G +CRA     A ++  EM+   I PN  TY +++  L +  
Sbjct: 365 QYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQ 424

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   A++VF  M   GCEP   T+  ++ +     R +  L V+ QM   G       ++
Sbjct: 425 KFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFS 484

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+  C + +LE+A      M+ KG  P    F+ +   + + G ++ A  M  K+  +
Sbjct: 485 ALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMASKLDAI 544

Query: 422 KCEP 425
           +  P
Sbjct: 545 RKTP 548


>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
 gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
 gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
          Length = 547

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 217/421 (51%), Gaps = 9/421 (2%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           ++SP  V  V++           +  L+FF W   +  F ++ + +H +I   GK++QF 
Sbjct: 124 AVSPELVAEVLKNLSNAG-----MLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFR 178

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L W  ++ M+ R + ++ DTF ++VRRY RA    EAV  F +M  +G   +   ++ +I
Sbjct: 179 LVWSLVETMRCRGL-LSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLI 237

Query: 226 SILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
             L + ++  +AQ+ +  +K   KF PD+  YT L+ GW    ++   + +++EM  AGI
Sbjct: 238 DTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGI 297

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V  Y ++I A C+ G+   A  VF EM   GC P+   +  L+       R ++ L+
Sbjct: 298 RPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALK 357

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            +   K+ G   +  T N ++  +C+  K + A K+++ M +    PN+ T+++I   + 
Sbjct: 358 YFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLI 417

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K      A+ ++ +M    CEP   TY +++ MF ++   DM LK+ K+M E  V P ++
Sbjct: 418 KSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMH 477

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
            +  LI   C       A  Y +EM+ +K ++P   ++  + + L + G++   +E+  K
Sbjct: 478 MFSALINGLCFENRLEEACVYFQEML-DKGIRPPGQLFSNLKEALVQGGRISLAQEVALK 536

Query: 524 M 524
           +
Sbjct: 537 L 537



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 3/281 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++   G  +   +       M    +   V  + +L+  + ++G   EA+  
Sbjct: 264 PDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKV 323

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG-WCR 264
           F  ME  GC P    + ++I+ L  + R  EA  +F+  K    P  +   N V G +CR
Sbjct: 324 FYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCR 383

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           A     A ++  EM+   + PN  TY +++  L +  +   A+++F  M   GCEP   T
Sbjct: 384 ASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNT 443

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++ +     R +  L+V+ QM   G       ++ LI+  C + +LE+A      M+
Sbjct: 444 YTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEML 503

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            KG  P    F+ +   + + G ++ A  +  K+  ++  P
Sbjct: 504 DKGIRPPGQLFSNLKEALVQGGRISLAQEVALKLDAIRKTP 544


>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 638

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 203/400 (50%), Gaps = 8/400 (2%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           +P L L  ++  +   + P  +  V+ + CG    +       FF W   +P + HS ++
Sbjct: 98  VPKLELALNE--SGVELRPGLIERVLNR-CGDAGNLGY----RFFVWAAKQPRYCHSIEV 150

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  M+ +  K+RQF   W  I+ M+  N + I  + F +LV+R+  A +  +A+   + M
Sbjct: 151 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 210

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             +G  PD+  F  ++  LC+     +A   F+ ++ +F  ++  +T+L+ GWCR   + 
Sbjct: 211 PTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRLRFPVNLRYFTSLLYGWCREEKMM 270

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ V  +MK AG +P++  Y+ ++      G++  A+D+  +M   G EPN+  +  L+
Sbjct: 271 EAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLI 330

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   K  R E+ ++V+ +M+R  CEAD +TY  L+   CK GK++    VL+ M++KG  
Sbjct: 331 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLM 390

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  I     K   +     +  KMK ++  P+   YN+++++          ++L
Sbjct: 391 PSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 450

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
             EME N + P  +T+ I+I      G    A  + +EM+
Sbjct: 451 WNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMV 490


>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Glycine max]
          Length = 507

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 225/447 (50%), Gaps = 14/447 (3%)

Query: 71  HRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEK--SCGVRHGIPL 128
           H   P P+ ++        T P+ ++     +     SP  V  V+ K  + GV      
Sbjct: 48  HTAQPRPTPDAEAICRILSTTPASTVDACLAAVPAKPSPELVLEVLNKLSNAGV------ 101

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
              LSFF W   + EF H+ + +H +I   GK+RQF + W  ++ MK R + +T DTFS+
Sbjct: 102 -LALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTLVNDMKQRKL-LTSDTFSL 159

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           + RRY RA  A EA+  F +ME YG  P    F+ ++ +LC+ +   EA   FD ++  +
Sbjct: 160 VARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLR 219

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            +PD+  YT L+ GW +  N+ +   V REM+  G Q +V  Y I+++A C+  +   A 
Sbjct: 220 LDPDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAI 279

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            ++ EM   G  P+   +  L+       R ++ L+ +   K  G   +  TYN ++  +
Sbjct: 280 GLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAY 339

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK--DLKCEP 425
           C   +++DA +++  M + G  PN+ TF+++   + K   +  A  ++ +M   +  CEP
Sbjct: 340 CWSLRMDDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEP 399

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  TY I+++MF   +  DM + +  EM+   + P ++ +  L+   C     + A KY 
Sbjct: 400 SVSTYEIMVRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYF 459

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAG 512
           +EM++   ++P + ++  + + L  AG
Sbjct: 460 QEMLDVG-IRPPAKMFSTLKEALVDAG 485



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 3/255 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+ +  ++ V  + I++  + +A    EA+  ++ M+  G  P    +  +I+ L   +R
Sbjct: 250 MEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKR 309

Query: 234 ASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  FF+ S    F P+   Y  +V  +C +  + +A R+  EMK  GI PN  T+ I
Sbjct: 310 LDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDI 369

Query: 293 VIDALCRCGQITRAHDVFAEM--LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           V+  L +  +I  A  VF  M   E GCEP+  T+  ++R+       +  + V+++MK 
Sbjct: 370 VLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKG 429

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G       ++ L+   C + KL++A K    M+  G  P A  F+ +   +   G  + 
Sbjct: 430 KGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALVDAGMEHV 489

Query: 411 AHRMYGKMKDLKCEP 425
           A     K+  L+  P
Sbjct: 490 AMHFTLKIDKLRKSP 504


>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Brachypodium distachyon]
          Length = 522

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 207/391 (52%), Gaps = 16/391 (4%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           D Y  +++  G+  QFD AW  + +  + +   T  TF++L RRYV AG+  +AV AF+ 
Sbjct: 115 DAYDAVVDALGRAHQFDAAWRLV-VEAAADGAATSRTFAVLARRYVAAGMTRQAVRAFDD 173

Query: 209 MEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN 267
           ME + G  PD   F+ ++  LC+ +    A   F+  K K+EP+  +YT L+ GWC+   
Sbjct: 174 MEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKMYTILIYGWCKVNR 233

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ----------ITRAHDVFAEMLEVG 317
              +++  ++M   GI+PNV TY+I+++ +CR             +  A D+  EM + G
Sbjct: 234 NDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDRG 293

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
            EP+  +++ ++ V+ +A + E  L ++  MK  G      TY  +I C    G+LEDA 
Sbjct: 294 IEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAE 353

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK--CEPNTVTYNILMQ 435
           ++L+ M  +G  P+ +T+N  F+      DV GA  +Y KMK       P+  +Y+IL+ 
Sbjct: 354 RLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILLG 413

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           MF        V +L  +M E+ V P++++Y +LI  +C    W  A ++  EMIE+  L 
Sbjct: 414 MFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGFL- 472

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           P    +E++ + L +A  L+    L +K VD
Sbjct: 473 PQKITFEILYRGLIQADMLRTWRRL-KKRVD 502


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 198/412 (48%), Gaps = 38/412 (9%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L  K +  D A    D M     E  V T+S ++    + G    A+    +MEE GC 
Sbjct: 19  GLCSKAKIMD-AVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCK 77

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+ +A++ +I  LC+ R  +EA  FF  + K+   PDV  Y++++ G+C  G ++EA  +
Sbjct: 78  PNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSL 137

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           F++M    + PN  T++I+ID LC+   I+ A  VF  M E G EP+  T+N L+  +  
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCS 197

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
            S+ ++  +++N M R GC  +  +YN LI+ HCK G++++A  +L  M  K   P+  T
Sbjct: 198 RSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFT 257

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           ++ + R   ++G    A  +  +M      PN +TY+I++         D   +L K M+
Sbjct: 258 YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ 317

Query: 455 ENEVEPNVNTYRILITMYCGMGHW-----------------------------------N 479
           E+++EPN+  Y ILI   C  G                                     N
Sbjct: 318 ESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSN 377

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            A +  REM    CL P S  Y +++Q   R G       L+E+MV +GF+A
Sbjct: 378 EACELFREMAVNGCL-PNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSA 428



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 189/405 (46%), Gaps = 6/405 (1%)

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
           +   H     T   +I   C + +    LQ+L        +P  V     Y+ +I+   K
Sbjct: 37  VKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVA----YNTIIDSLCK 92

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
            R    A  F   M    +   V T+S ++  +   G   EA   F +M E    P+K+ 
Sbjct: 93  DRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVT 152

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           F+I+I  LC+KR  SEA   F+++ +K  EPDV  Y  LV G+C    + EA+++F  M 
Sbjct: 153 FTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMD 212

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G  PNV +Y+I+I+  C+ G+I  A  + AEM      P+  T++ LMR   +  R +
Sbjct: 213 RKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQ 272

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           +  ++  +M   G   + ITY+ ++D  CK G L++A ++L +M      PN   + ++ 
Sbjct: 273 EAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILI 332

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             +   G +  A  ++  +     +P  VTY +++        ++   +L +EM  N   
Sbjct: 333 EGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCL 392

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
           PN  TY ++I  +   G   NA + I EM+  K     SS + M+
Sbjct: 393 PNSCTYNVIIQGFLRNGDTPNAVRLIEEMV-GKGFSADSSTFRML 436



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 37/356 (10%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M + G  P  + F+ ++S LC K +  +A   FD + K   EPDVI Y+ ++ G C+ GN
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            + A ++ ++M+  G +PNV  Y+ +ID+LC+   +T A D F+EM++ G  P+  T+++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 328 LMRVHVKASRTEKVLQVYNQM---------------------KRL--------------G 352
           ++       R  +   ++ QM                     KR+              G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            E D  TYN L+D +C   ++++A K+ N M RKGC PN  ++N++     K G ++ A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +  +M      P+  TY+ LM+ F          +L KEM    + PN+ TY I++   
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  GH + A++ ++ M E K ++P   +Y ++++ +   G+L+   EL   +  +G
Sbjct: 301 CKHGHLDEAFELLKAMQESK-IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+QP + T++ ++  LC   +I  A  +F EM+++G EP+ IT++ ++    K   T   
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           LQ+  +M+  GC+ + + YN +ID  CKD  + +A+   + MV++G  P+  T++ I   
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
              LG VN A  ++ +M +    PN VT+ IL+      +       + + M E  +EP+
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V TY  L+  YC     + A K    M  + C  P    Y +++    ++G++ + + L+
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGC-APNVRSYNILINGHCKSGRIDEAKGLL 243

Query: 522 EKMVDRGFT 530
            +M  +  T
Sbjct: 244 AEMSHKSLT 252


>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 204/393 (51%), Gaps = 3/393 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF-IDLMKSRNVEITVDTFSILVRR 192
           FF W  + P F HS   +H ++ + G  +QF + W F I++  S + EI  + F ++ R 
Sbjct: 97  FFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRA 156

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
           Y +A L   A+ +FNRM+E+G  P    F  ++ ILC+ +   +AQ FFD  K++F    
Sbjct: 157 YSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTA 216

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             Y+ L+ GW   G+  +A  +F+ M   G   ++  Y+ ++ ALC+ G +  A  +F +
Sbjct: 217 KTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHD 276

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           ML    EP++ T++  +  +  A   +  L+V ++M+R     +  TYN +I   CK+  
Sbjct: 277 MLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEH 336

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +E+A  +L+ M+ +G  P+  ++N I        +VN A R+  +M+   C P+  TYN+
Sbjct: 337 VEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNM 396

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC-GMGHWNNAYKYIREMIEE 491
           ++++       D V K+   M + +  P+V+TY ++I  +C   G    A KY   MI+E
Sbjct: 397 VLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDE 456

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             + P  +  EM+  QL   G L   E L  KM
Sbjct: 457 G-IPPYVTTVEMLRNQLLGLGFLDHIEILAAKM 488



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 38/306 (12%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           + +++ +  K +    A  F D  K+R + +T  T+SIL+  +   G + +A   F  M 
Sbjct: 185 FDKLLFILCKTKHVKQAQQFFDQAKNRFL-LTAKTYSILISGWGDIGDSEKAHELFQAML 243

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E GC  D +A++ ++  LC+     EA++ F D L  + EPD   Y+  +  +C A ++ 
Sbjct: 244 EQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQ 303

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG------------ 317
            A RV  +M+   I PNV+TY+ +I  LC+   +  A+ +  EM+  G            
Sbjct: 304 SALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQ 363

Query: 318 -----------------------CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
                                  C P+  T+N ++++ ++  R +KV +V+  M      
Sbjct: 364 AYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFY 423

Query: 355 ADTITYNFLIDCHCKD-GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
               TY+ +I   CK  GKLE+A K    M+ +G  P  +T  M+   +  LG ++    
Sbjct: 424 PSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQLLGLGFLDHIEI 483

Query: 414 MYGKMK 419
           +  KM+
Sbjct: 484 LAAKMR 489


>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor
 gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
 gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 188/363 (51%), Gaps = 4/363 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           +P+ V  V+++     HG   LQ   F +      E+VH    +   I++A ++      
Sbjct: 55  TPNLVNSVLKRLWN--HGPKALQFFHFLD--NHHREYVHDASSFDLAIDIAARLHLHPTV 110

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           W  I  M+S  +  +  TF+I+  RY  AG   +AV  F  M E+GC  D  +F+ ++ +
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           LC+ +R  +A   F +L+ +F  D + Y  ++ GWC      +A  V +EM   GI PN+
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ ++    R GQI  A + F EM +  CE + +T+  ++     A   ++   V+++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M R G      TYN +I   CK   +E+A+ +   MVR+G  PN +T+N++ R +   G+
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            +    +  +M++  CEPN  TYN++++ ++     +  L L ++M   +  PN++TY I
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410

Query: 468 LIT 470
           LI+
Sbjct: 411 LIS 413



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   I P+  T++IV +     G+  +A  +F  M E GC  +  +FN ++ V  K+ R
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            EK  +++  + R     DT+TYN +++  C   +   A++VL  MV +G NPN +T+N 
Sbjct: 177 VEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           + +   + G +  A   + +MK   CE + VTY  ++  F  +        +  EM    
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V TY  +I + C   +  NA     EM+  +  +P  + Y ++++ L  AG+  + 
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMV-RRGYEPNVTTYNVLIRGLFHAGEFSRG 354

Query: 518 EELVEKMVDRG 528
           EEL+++M + G
Sbjct: 355 EELMQRMENEG 365



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG++R    AW F   MK R+ EI V T++ +V  +  AG    A + F+ M   G  P 
Sbjct: 243 AGQIRH---AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
              ++ +I +LC+K     A   F+ + +  +EP+V  Y  L+RG   AG  S  E + +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA------------------------- 311
            M+  G +PN  TY+++I     C ++ +A  +F                          
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419

Query: 312 -------------EMLEVGCEPNSITFNNLM 329
                        EM+E G  P   TFN ++
Sbjct: 420 RSEDMVVAGKLLLEMVERGFIPRKFTFNRVL 450


>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
 gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 453

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 188/363 (51%), Gaps = 4/363 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           +P+ V  V+++     HG   LQ   F +      E+VH    +   I++A ++      
Sbjct: 55  TPNLVNSVLKRLWN--HGPKALQFFHFLD--NHHREYVHDASSFDLAIDIAARLHLHPTV 110

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           W  I  M+S  +  +  TF+I+  RY  AG   +AV  F  M E+GC  D  +F+ ++ +
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           LC+ +R  +A   F +L+ +F  D + Y  ++ GWC      +A  V +EM   GI PN+
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ ++    R GQI  A + F EM +  CE + +T+  ++     A   ++   V+++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M R G      TYN +I   CK   +E+A+ +   MVR+G  PN +T+N++ R +   G+
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            +    +  +M++  CEPN  TYN++++ ++     +  L L ++M   +  PN++TY I
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410

Query: 468 LIT 470
           LI+
Sbjct: 411 LIS 413



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   I P+  T++IV +     G+  +A  +F  M E GC  +  +FN ++ V  K+ R
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            EK  +++  + R     DT+TYN +++  C   +   A++VL  MV +G NPN +T+N 
Sbjct: 177 VEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           + +   + G +  A   + +MK   CE + VTY  ++  F  +        +  EM    
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V TY  +I + C   +  NA     EM+  +  +P  + Y ++++ L  AG+  + 
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMV-RRGYEPNVTTYNVLIRGLFHAGEFSRG 354

Query: 518 EELVEKMVDRG 528
           EEL+++M + G
Sbjct: 355 EELMQRMENEG 365



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 9/280 (3%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           S +T+  V+ KS  V     L + L        R  F      Y+ ++N    +++   A
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRAL--------RGRFSVDTVTYNVILNGWCLIKRTPKA 214

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
              +  M  R +   + T++ +++ + RAG    A   F  M++  C  D + ++ V+  
Sbjct: 215 LEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHG 274

Query: 228 LCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
                    A++ FD + ++   P V  Y  +++  C+  N+  A  +F EM   G +PN
Sbjct: 275 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPN 334

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           V TY+++I  L   G+ +R  ++   M   GCEPN  T+N ++R + + S  EK L ++ 
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 394

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +M    C  +  TYN LI       + ED +   N    K
Sbjct: 395 KMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAK 434


>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 587

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 230/467 (49%), Gaps = 35/467 (7%)

Query: 74  NPNPSS---NSNPSLNP-DFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLL 129
           NPNP+S   +S P+ +P DFT+       S + T  SISP +         G++   PLL
Sbjct: 54  NPNPNSKPESSQPTFSPNDFTL------ISTLFTNPSISPGSSLLTNLTQTGIKPTPPLL 107

Query: 130 QVL------------SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
             +            S + W   +P F     L+  +IN   K+++FD AW  +     R
Sbjct: 108 HAVFDHFASSPKLLHSLYLWALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRR 167

Query: 178 NVE-----ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA----FSIVISIL 228
           + +     ++V TF+I++RRY RAG+   A+  F   ++     D ++    F I+I  L
Sbjct: 168 DDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSL 227

Query: 229 CRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
           C++  A EA  +    K+    + P + VY  ++ GW RA  +  AER++ EMK   ++P
Sbjct: 228 CKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRP 287

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V TY  +++  CR  ++ +A ++  EM + G +PN+I +N ++    +A R ++ L + 
Sbjct: 288 SVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMM 347

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +   L       TYN L+   CK G +E A K+L  M+ +G  P  +T+N  FR  S+ 
Sbjct: 348 ERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRC 407

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V+    +Y KM +    P+ +TY+++++M    +  ++ +++  EM     + ++ T 
Sbjct: 408 GKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATS 467

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
            +L  + C M     A+    +MI    + P    ++ +  +L++ G
Sbjct: 468 TMLTHLLCKMHKLEEAFAEFEDMIRRGII-PQYLTFQKLNVELKKQG 513



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 120/271 (44%), Gaps = 28/271 (10%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVF-----------AEMLEVGCEPNSITFNNLMR 330
           G +P+   +  VI+AL +  +   A  +             +++ VG      TF  ++R
Sbjct: 133 GFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRDDDDDEKLVSVG------TFAIIIR 186

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTIT----YNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            + +A   +  ++ +   K      D+++    +  LID  CK+G   +A + L  + RK
Sbjct: 187 RYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSAREASEYL--LRRK 244

Query: 387 ----GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
               G  P+   +N++     +   +  A R++ +MK+    P+ VTY  L++ +   + 
Sbjct: 245 ETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRR 304

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +  L++  EM +  ++PN   Y  +I      G +  A   + E      + P  S Y 
Sbjct: 305 VEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMM-ERFHVLQIGPTLSTYN 363

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            +++   +AG ++   ++++KM+ RGF   P
Sbjct: 364 SLVKGFCKAGDIEGASKILKKMISRGFLPIP 394


>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 187/363 (51%), Gaps = 4/363 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           +P+ V  V+++     HG   LQ   F +      E+VH    +   I++A ++      
Sbjct: 53  TPNLVNSVLKRLWN--HGPKALQFFHFLD--NHHREYVHDASSFDLAIDIAARLHIHPTV 108

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           W  I  M+S  +  +  TF+I+  RY  +G   +AV  F  M E+GC  D  +F+ ++ +
Sbjct: 109 WSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 168

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           LC+ +R  +A   F +L+ +F  D + Y  +V GWC      +A  V +EM   GI PN+
Sbjct: 169 LCKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNL 228

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ ++    R GQI +A + F EM +  CE + +T+  ++     A   ++   V+++
Sbjct: 229 TTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDE 288

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M R G      TYN  I   CK   +E+A+ +   MVRKG  PN +T+N++ R +   G 
Sbjct: 289 MIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGK 348

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            +    +  +M++  CEPN  TYN++++ ++     +  L L ++M   +  PN++TY I
Sbjct: 349 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNI 408

Query: 468 LIT 470
           LI+
Sbjct: 409 LIS 411



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   I P+  T++IV +     G+  +A  +F  M E GC  +  +FN ++ V  K+ R
Sbjct: 115 MRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 174

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            EK  +++  + R    ADT+TYN +++  C   +   A++VL  MV +G NPN +T+N 
Sbjct: 175 VEKAYELFRAL-RGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNT 233

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           + +   + G +  A   + +MK   CE + VTY  ++  F  +        +  EM    
Sbjct: 234 MLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREG 293

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V TY   I + C      NA     EM+  K  +P  + Y ++++ L  AG+  + 
Sbjct: 294 VLPSVATYNAFIQVLCKKDSVENAVVMFEEMV-RKGYEPNVTTYNVLIRGLFHAGKFSRG 352

Query: 518 EELVEKMVDRG 528
           EEL+++M + G
Sbjct: 353 EELMQRMENEG 363



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 9/280 (3%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           S +T+  V+ KS  V     L + L        R  F      Y+ ++N    +++   A
Sbjct: 161 SFNTILDVLCKSKRVEKAYELFRAL--------RGRFSADTVTYNVIVNGWCLIKRTPKA 212

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
              +  M  R +   + T++ +++ + RAG   +A   F  M++  C  D + ++ V+  
Sbjct: 213 LEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHG 272

Query: 228 LCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
                     ++ FD + ++   P V  Y   ++  C+  ++  A  +F EM   G +PN
Sbjct: 273 FGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPN 332

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           V TY+++I  L   G+ +R  ++   M   GCEPN  T+N ++R + + S  EK L ++ 
Sbjct: 333 VTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 392

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +M    C  +  TYN LI       + ED +   N    K
Sbjct: 393 KMGTGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAK 432


>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g13420, mitochondrial; Flags: Precursor
 gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
          Length = 509

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 228/440 (51%), Gaps = 28/440 (6%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           S++P+ +   + +   +RH   +   LSFF ++ + P    +P  ++ +I++ G+VRQFD
Sbjct: 68  SLTPNLIHQTLLR---LRHNSKI--ALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFD 122

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK-----IA 220
           +    I  M     + + +TF ILV+R + AGL  +AV AF+   +  C  +      + 
Sbjct: 123 VVRQLIVEMD----QTSPETFLILVKRLIAAGLTRQAVRAFD---DAPCFLENRRFRLVE 175

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           F  ++  LC+      A   F+  K++F  D  VYT L+ GWC+   I  AE+   EM  
Sbjct: 176 FGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIE 235

Query: 281 AGIQPNVYTYSIVIDALCRCGQ----------ITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           +GI+PNV TY+++++ +CR             +  A  VF EM + G EP+  +F+ ++ 
Sbjct: 236 SGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLH 295

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
           ++ +A + E  L     MK  G      TY  ++ C C  G+LE+A ++L +MV  G +P
Sbjct: 296 MYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISP 355

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +++T+N  F+      D NGA  +Y KMK+  C+P+T TYN+L+  F      + V ++ 
Sbjct: 356 SSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIW 415

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            +++ +E  P++++Y  L+   C    W  A  Y  EMIE   L P    +E + + L +
Sbjct: 416 DDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFL-PQKLTFETLYKGLIQ 474

Query: 511 AGQLQKHEELVEKMVDRGFT 530
           + +++    L +K+ +   T
Sbjct: 475 SNKMRTWRRLKKKLDEESIT 494


>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
          Length = 526

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 209/410 (50%), Gaps = 18/410 (4%)

Query: 131 VLSFFNWVTARPEFVHS---PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
            LS  +     P FV++    D Y  +++  G+ RQFD AW  + +  S +   +  TF+
Sbjct: 98  ALSLLHAARLHPSFVNTQPRSDAYDAVVDALGRARQFDAAWRVV-VDASADGAASPRTFA 156

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           +L RRYV AG+  +A+ AF+ ME +    PD   F+ ++  LC+ +    A   F+  K 
Sbjct: 157 VLARRYVAAGMTRQAIRAFDDMEAFVSREPDAAEFATLLDTLCKYKYPKVATEVFNKRKY 216

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ---- 302
           K+ P+  +Y+ L+ GWC+      A++  ++M + GI+PN+ TY+I+++ +CR       
Sbjct: 217 KYGPNEKMYSILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPD 276

Query: 303 ------ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
                 +  A D+  EM   G EP+  +++ ++ V+ +A + E  L ++  MK  G    
Sbjct: 277 YRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPT 336

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TY  +I C    G+LED   +L+ MV +G  P+ +T+N   +      DV  A  +Y 
Sbjct: 337 VATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYN 396

Query: 417 KMKDLK--CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           KMK       P+  TYNIL+ MF+       V+ +  +M E+ V P++++Y +LI  +C 
Sbjct: 397 KMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCD 456

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              W  A ++  EMIE+  L P    +E + + L +A  L+    L  ++
Sbjct: 457 SQKWREACQFFMEMIEKGFL-PQKITFETLYRGLIQADMLRTWRRLKRRV 505


>gi|224170141|ref|XP_002339343.1| predicted protein [Populus trichocarpa]
 gi|222874904|gb|EEF12035.1| predicted protein [Populus trichocarpa]
          Length = 190

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/195 (56%), Positives = 141/195 (72%), Gaps = 9/195 (4%)

Query: 1   MALIKSNHRLPFSLSQQIPKAYS---FFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEET 57
           MAL+K+  R P SLS  + K +S     +S + L EDD  D   +   +P TP LSPEET
Sbjct: 1   MALLKTKLRFPHSLSPHLIKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTP-LSPEET 59

Query: 58  LISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQ-ISTAHSISPSTVRHVI 116
            ++EK HSLIKDH+R NPN +   +P+    +TIPSLSL FSQ IST HSISPS +RHVI
Sbjct: 60  SVAEKLHSLIKDHYRNNPNKTLPPDPT----YTIPSLSLDFSQTISTVHSISPSIIRHVI 115

Query: 117 EKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKS 176
           E+S GVRHGIP+ QVL+FFNW + +  F  SP+ ++EM++ +GKVR FDLAWH IDLMK+
Sbjct: 116 EQSGGVRHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFSGKVRMFDLAWHVIDLMKA 175

Query: 177 RNVEITVDTFSILVR 191
           R VEITV+TFSIL+R
Sbjct: 176 RGVEITVETFSILIR 190


>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
 gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 213/408 (52%), Gaps = 8/408 (1%)

Query: 107 ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           +SPS V   ++K   + +   L   LSFF W   +  F +S + YH +I   GK++QF++
Sbjct: 3   VSPSLVFEALKK---LSNAGAL--ALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNV 57

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            W+ +  MK + + +  +TF+++ RRY RA    EAV AF +ME++G   +    + ++ 
Sbjct: 58  IWNLVTDMKQKGL-LNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLD 116

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC+ R+   AQ  FD + K  F  D+  YT L+ GW +  N+S    V+ EMK  G +P
Sbjct: 117 TLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEP 176

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V TY I+I+A C+  +   A ++F EM    C+P+   +  L+       R  + L+ +
Sbjct: 177 DVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFF 236

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
              K  G   +  TYN ++  +C   +++D  + ++ M + G  P+A T+++I   + + 
Sbjct: 237 ELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRA 296

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G    A+ ++ KM    C+P+  TY I+++MF      DM +K+  +M+   + P ++ +
Sbjct: 297 GKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMF 356

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
             LI   C     + A  Y +EM++   ++P + ++  + Q L   G+
Sbjct: 357 STLINSLCHESKLDEACMYFQEMLDVG-IRPPAQLFSNLKQNLLDEGK 403



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 2/252 (0%)

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           +MK  G+  N  T++++     R  ++  A D F +M + G +  S   N L+    K+ 
Sbjct: 64  DMKQKGLL-NKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSR 122

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           + E+   V+++M + G  AD  +Y  L++   ++  L   ++V N M  +G  P+  T+ 
Sbjct: 123 QVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYG 182

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           ++     K    + A  ++ +M+   C+P+   Y  L+      K     L+  +  + +
Sbjct: 183 ILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKAS 242

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
              P   TY  ++  YC     ++  + I EM  +  + P +  Y+++L  L RAG+ + 
Sbjct: 243 GFVPEAPTYNAVVGAYCWSERMDDVQRTIDEM-RKGGVGPSARTYDIILHHLIRAGKTKI 301

Query: 517 HEELVEKMVDRG 528
              + +KM   G
Sbjct: 302 AYSVFQKMSCEG 313


>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
 gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 182/342 (53%), Gaps = 2/342 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L FF  +   P + HS   +   I++AG++R +   W  +  M++R +  +  TF+I+
Sbjct: 94  KALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAII 153

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKF 248
             R+V AG    A+  F  M E+GC  D  +F+ ++ ILC+ +R   A  + F  L+ KF
Sbjct: 154 AERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKF 213

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           + DV+ Y  +  GWC      +A  V +EM   G+ P + TY+I++    R GQ+  A +
Sbjct: 214 KADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWE 273

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
            F +M E   E + +T+  ++         ++  +V+N+M   G    T TYN +I   C
Sbjct: 274 FFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLC 333

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K   +E+A+ +   MV+KG  PN +T+N++ R +   G+++ A     +MK   CEPN  
Sbjct: 334 KKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQ 393

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           TYN+ ++ F  +   +  L + ++M +  + PN++TY +LI+
Sbjct: 394 TYNVAIRYFCDAGDVEKGLSMFEKMGQGSL-PNLDTYNVLIS 434


>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
          Length = 447

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 187/363 (51%), Gaps = 4/363 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           +P+ V  V+++     HG   LQ   F +      E+VH    +   I++A ++      
Sbjct: 49  TPNLVNSVLKRLWN--HGPKALQFFHFLD--NHHREYVHDASSFDLAIDIAARLHLHPTV 104

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           W  I  M+S  +  +  TF+I+  RY  AG   +AV  F  M E+GC  D  +F+ ++ +
Sbjct: 105 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 164

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           LC+ +R  +A   F +L+ +F  D + Y  ++ GWC      +   V +EM   GI PN+
Sbjct: 165 LCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNL 224

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ ++    R GQI  A + F EM +  CE + +T+  ++     A   ++   V+++
Sbjct: 225 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 284

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M R G      TYN +I   CK   +E+A+ +   MVR+G  PN +T+N++ R +   G+
Sbjct: 285 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 344

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            +    +  +M++  CEPN  TYN++++ ++     +  L L ++M   +  PN++TY I
Sbjct: 345 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 404

Query: 468 LIT 470
           LI+
Sbjct: 405 LIS 407



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   I P+  T++IV +     G+  +A  +F  M E GC  +  +FN ++ V  K+ R
Sbjct: 111 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 170

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            EK  +++  + R     DT+TYN +++  C   +    ++VL  MV +G NPN +T+N 
Sbjct: 171 VEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNT 229

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           + +   + G +  A   + +MK   CE + VTY  ++  F  +        +  EM    
Sbjct: 230 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 289

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V TY  +I + C   +  NA     EM+  +  +P  + Y ++++ L  AG+  + 
Sbjct: 290 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMV-RRGYEPNVTTYNVLIRGLFHAGEFSRG 348

Query: 518 EELVEKMVDRG 528
           EEL+++M + G
Sbjct: 349 EELMQRMENEG 359



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 1/214 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R +   + T++ +++ + RAG    A   F  M++  C  D + ++ V+        
Sbjct: 215 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 274

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A++ FD + ++   P V  Y  +++  C+  N+  A  +F EM   G +PNV TY++
Sbjct: 275 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 334

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I  L   G+ +R  ++   M   GCEPN  T+N ++R + + S  EK L ++ +M    
Sbjct: 335 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 394

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           C  +  TYN LI       + ED +   N    K
Sbjct: 395 CLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAK 428



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 105/241 (43%), Gaps = 2/241 (0%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           ++ + ID   R         +   M  +   P+  TF  +   +  A + +K ++++  M
Sbjct: 87  SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 146

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              GC  D  ++N ++D  CK  ++E A ++  ++ R   + +  T+N+I      +   
Sbjct: 147 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRT 205

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
                +  +M +    PN  TYN +++ F  +       +   EM++ + E +V TY  +
Sbjct: 206 PKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 265

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  +   G    A     EMI E  L P  + Y  ++Q L +   ++    + E+MV RG
Sbjct: 266 VHGFGVAGEIKRARNVFDEMIREGVL-PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 324

Query: 529 F 529
           +
Sbjct: 325 Y 325


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 191/385 (49%), Gaps = 2/385 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I L     Q   A   ++ M    V +    F+ ++  +   G  A A   F  M
Sbjct: 324 VYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEM 383

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           ++ G A D++  + +I+ LCR     EA      + DK  + DV+ YT L+ G+C+ GN+
Sbjct: 384 QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM 443

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA RV  EM    + PNV TY+ + D LC+ G +  A+++  EM   G E N  T+N+L
Sbjct: 444 VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSL 503

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K    E+ +++  +M+  G   D  TY  LID  CK G+ + A  +L  M+ KG 
Sbjct: 504 INGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGI 563

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+ +T+N++       G V G  ++   M +    PN VTYN LM+ +   K+     +
Sbjct: 564 KPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTE 623

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + K M   EV PN NTY ILI  +C   +   A  + +EMI EK L+  +S Y  +++ L
Sbjct: 624 IYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMI-EKGLRLTASSYSALIRLL 682

Query: 509 RRAGQLQKHEELVEKMVDRGFTARP 533
            +  +  +     +KM + G TA P
Sbjct: 683 NKKKKFSEARVFFDKMRNEGLTAEP 707



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 170/346 (49%), Gaps = 5/346 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V + +IL++  + AG   +A   F+ M      PD + +  ++   C +     A    D
Sbjct: 255 VCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLLD 311

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  K  E +  VYT+++   C  G +S+A RV  +M M G+  +   ++ VI   C  G
Sbjct: 312 EMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKG 371

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A  +F EM + G   + +T   L+    +A   ++  +V  +M   G + D +TY 
Sbjct: 372 DLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYT 431

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID +CK G + +A +V N MV +   PN  T+  +   + K GDV  A+ +  +M + 
Sbjct: 432 VLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK 491

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             E N  TYN L+       + +  +++  EME      +V TY  LI   C  G ++ A
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +  ++EM+ +K +KP  + Y +++     +G+++  ++L+E M+++
Sbjct: 552 HNMLQEML-DKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK 596



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 147/311 (47%), Gaps = 41/311 (13%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG++++ D     +  M  + +++ V T+++L+  Y + G   EA    N M     AP+
Sbjct: 405 AGELKEAD---RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPN 461

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + ++ +   LC++     A      + +K  E +V  Y +L+ G C+ GN+ +A R+  
Sbjct: 462 VVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMT 521

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP---------------- 320
           EM+ AG + +VYTY+ +ID LC+ G+  RAH++  EML+ G +P                
Sbjct: 522 EMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSG 581

Query: 321 -------------------NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
                              N +T+N+LM+ +      +   ++Y  M       +  TYN
Sbjct: 582 RVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYN 641

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD- 420
            LI  HCK   +++A+     M+ KG    AS+++ + R ++K    + A   + KM++ 
Sbjct: 642 ILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNE 701

Query: 421 -LKCEPNTVTY 430
            L  EP+  ++
Sbjct: 702 GLTAEPDVYSF 712


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 199/380 (52%), Gaps = 2/380 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++  GK  QFD A   +  M+       V T++ L+    +AG  +EA   F  M 
Sbjct: 82  YNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMR 141

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E GC PD   ++ +I  L +  R+ +A    + + +    PDV+ Y++L+ G  + G   
Sbjct: 142 ERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETV 201

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++F+EMK  G +P+  T++ ++DAL + G++  A ++  EM E G +P  +T+N L+
Sbjct: 202 KAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K     +   + ++MKR GC+ D +TY+ LI    K  +L++A +VL  M ++GC 
Sbjct: 262 AGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP 321

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N +   + K G +N A R++ +MK   C P+ VTY+ L+     +   +    L
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVL 381

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +EME   ++P++ TY  +IT+    G  ++A +   EM   K L P    Y   L  L 
Sbjct: 382 FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM-RGKGLSPDVITYNAFLNSLG 440

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           R G+ ++  ++ E M + G 
Sbjct: 441 RGGRFKEARKIFEDMKESGL 460



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 198/384 (51%), Gaps = 4/384 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+  GK  +   A+     M+ R       T++ L+    + G + +A+  
Sbjct: 112 PDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMEL 171

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCR 264
              ME +GC PD + +S +I+ L +     +A   F  +K +  +PD I +T L+    +
Sbjct: 172 LEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG + +A  +  EMK  G++P V TY+ +I    + G +  A+++  EM   GC+P+ +T
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVT 291

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+   +KAS+ ++  QV  +M++ GC  DTITYN LI+   K G L DA ++ + M 
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KGCNP+  T++ +   + K   V  A  ++ +M+ +  +P+  TY  ++ +   +   D
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVD 411

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              +L  EM    + P+V TY   +      G +  A K   +M +E  L P  + Y+ +
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM-KESGLLPDVATYDAL 470

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           L  L +  ++     L+++++++G
Sbjct: 471 LLGLSKTKEVDDACGLLKELIEQG 494



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 169/315 (53%), Gaps = 2/315 (0%)

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAER 273
           +P+ + ++ +++ L +  +  EAQ  F+ LK  K+ PDV+ Y+ L+    RAG    A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           V  EM+  G +PN++TY+ ++D L + GQ   A  + AEM + GC P+  T+N L+    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           KA R  +   ++ +M+  GC  DT TYN LI    K G+ + A+++L  M R GC P+  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T++ +   + K G+   A +++ +MK    +P+++T+  LM     +   D  L+L  EM
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           +E  V+P V TY  LI  +  +G    AY  + EM    C KP    Y  ++  L +A Q
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC-KPDVVTYSCLITGLIKASQ 304

Query: 514 LQKHEELVEKMVDRG 528
           L +  ++++KM   G
Sbjct: 305 LDEACQVLKKMEKEG 319



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 178/347 (51%), Gaps = 2/347 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ L+    +AG   EA   F  ++     PD +++S +I+ L R  +   A     
Sbjct: 9   VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVA 68

Query: 243 SLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            ++ K  +P++  Y  LV    +AG   EA R+  EM+  G  P+V TY+ +I  L + G
Sbjct: 69  EMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAG 128

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +++ A  +FAEM E GC P++ T+N+L+    K  R++K +++  +M+R GC  D +TY+
Sbjct: 129 RLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYS 188

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI    KDG+   A K+   M R+G  P++ TF  +   + K G V+ A  +  +MK+ 
Sbjct: 189 SLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKER 248

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +P  VTYN L+  F           L  EM+ N  +P+V TY  LIT        + A
Sbjct: 249 GVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEA 308

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + +++M +E C  P +  Y  ++  L +AG L     L ++M  +G
Sbjct: 309 CQVLKKMEKEGC-PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 223/466 (47%), Gaps = 27/466 (5%)

Query: 87  PD-FTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIP--LLQVLSFFNWVTARPE 143
           PD FT  SL  G  ++  +          ++E+    RHG P  ++   S    +    E
Sbjct: 147 PDTFTYNSLIYGLGKVGRSQK-----AMELLEEM--ERHGCPPDVMTYSSLITGLGKDGE 199

Query: 144 FVHSPDLYHEM---------------INLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            V +  L+ EM               ++  GK  + D A   +D MK R V+  V T++ 
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDK 247
           L+  + + G   EA +  + M+  GC PD + +S +I+ L +  +  EA      + K+ 
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             PD I Y  L+ G  +AG +++A R+F  MK  G  P+V TYS +I AL +  ++  A 
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +F EM  VG +P+  T+ +++ V  KA + +   +++++M+  G   D ITYN  ++  
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
            + G+ ++A K+   M   G  P+ +T++ +   +SK  +V+ A  +  ++ +  C  ++
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           + ++  +++  +  + D   +L +      + P  ++Y  LI      G  + A+  + E
Sbjct: 500 LKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTL-E 558

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            ++E+  KP    Y  ++  L + GQ+    EL+E+M  RG    P
Sbjct: 559 DLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSP 604



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 193/386 (50%), Gaps = 4/386 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y+ ++N   K  Q + A    + +K+      V ++S L+    RAG    A+ 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWC 263
               M+  GC P+   ++ ++  L +  +  EA      ++D    PDV  Y  L+    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG +SEA  +F EM+  G  P+ +TY+ +I  L + G+  +A ++  EM   GC P+ +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+++L+    K   T K  +++ +MKR G + D+IT+  L+D   K G+++DA+++L+ M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             +G  P   T+N +     K+GD+  A+ +  +MK   C+P+ VTY+ L+     +   
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   ++ K+ME+    P+  TY  LI      G  N+A +    M  + C  P    Y  
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGC-NPDVVTYST 364

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++  L +A +++    L E+M   G 
Sbjct: 365 LITALGKAARVESACVLFEEMESVGI 390



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 162/325 (49%), Gaps = 3/325 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I    K  Q D A   +  M+         T++ L+    +AGL  +A   
Sbjct: 287 PDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
           F+RM+  GC PD + +S +I+ L +  R   A   F+ ++    +PD+  Y +++    +
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG + +A+R+F EM+  G+ P+V TY+  +++L R G+   A  +F +M E G  P+  T
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    K    +    +  ++   GC  D++ ++  ++     G +++A ++L    
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFAN 526

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P AS++N +   ++K G V+ A      +K+   +P+ V+Y+ L+     +   D
Sbjct: 527 SKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQID 586

Query: 445 MVLKLKKEMEENEVEPNVNTYRILI 469
              +L +EM +  ++ +  +Y  L+
Sbjct: 587 TAFELLEEMSKRGLKLSPRSYSNLV 611



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 3/187 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+  +N  G+  +F  A    + MK   +   V T+  L+    +     +A  
Sbjct: 426 SPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACG 485

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               + E GCA D + F   + IL       EA         K   P    Y  L+    
Sbjct: 486 LLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALA 545

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG +SEA     ++K  G +P++ +YS +I AL + GQI  A ++  EM + G + +  
Sbjct: 546 KAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPR 605

Query: 324 TFNNLMR 330
           +++NL+R
Sbjct: 606 SYSNLVR 612


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 196/412 (47%), Gaps = 38/412 (9%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L+ K +  D A    D M     E  V T+S ++    + G    A+    +MEE GC 
Sbjct: 56  GLSSKAKIID-AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCK 114

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+ + +S +I  LC+ +  +EA  F   + ++   P+V+ Y++++ G+C  G  +EA  +
Sbjct: 115 PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           F++M    + P+  T++I++D L + G I  A  VF  M+E G EPN  T+N LM  +  
Sbjct: 175 FKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
            S+ ++  +++N M R GC     +YN LI  HCK G++++A  +L  M  K   P+  T
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           ++ + +   + G    A ++  +M+     P+ +TY+I++         D   +L K M+
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354

Query: 455 ENEVEPNVNTYRILITMYCGMGHW-----------------------------------N 479
           E+++EPN+  Y ILI   C  G                                     N
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            A +  R+M    CL P S  Y +++Q   R G       L+E+MV RGF+A
Sbjct: 415 EACELFRDMAVHGCL-PNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSA 465



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 179/345 (51%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TFS L+          +AV  F+ M + G  PD I +S +I+ LC+    + A      +
Sbjct: 49  TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           ++K  +P+V+VY+ ++   C+   I+EA     EM   GI PNV TYS ++   C  G+ 
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F +M+E    P+++TFN L+    K     +   V+  M   G E +  TYN L
Sbjct: 169 NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNAL 228

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D +C   ++++A K+ N MVRKGC P+  ++N++ +   K G ++ A  +  +M     
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+TVTY+ LM+ F          KL +EM    + P++ TY I++   C  GH + A++
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            ++ M E K ++P   +Y +++Q +   G+L+   EL   +  +G
Sbjct: 349 LLKAMQESK-IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG 392



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 180/394 (45%), Gaps = 40/394 (10%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   +I   C +      +Q+L        +P  V    +Y  +I+   K +    A  F
Sbjct: 84  TYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVV----VYSTIIDSLCKDKLITEAMEF 139

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +  M +R +   V T+S ++  +   G + EA   F +M E    PD + F+I++  L +
Sbjct: 140 LSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSK 199

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           +    EAQ  F+++ +K  EP+V  Y  L+ G+C    + EA+++F  M   G  P+V +
Sbjct: 200 EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS 259

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+I+I   C+ G+I  A  + AEM      P+++T++ LM+   +  R +   ++  +M+
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR------------------------ 385
             G   D +TY+ ++D  CK G L++A ++L +M                          
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLE 379

Query: 386 -----------KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
                      KG  P+  T+ ++   + K G  N A  ++  M    C PN+ TYN+++
Sbjct: 380 AARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVII 439

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           Q F  +  T    +L +EM       + +T+++L
Sbjct: 440 QGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 5/284 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    + M  + VE  V+T++ L+  Y       EA   FN M   GCAP   +++I+I 
Sbjct: 206 AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIK 265

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+  R  EA+     +  K   PD + Y+ L++G+C+ G   +A+++  EM+  G+ P
Sbjct: 266 GHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP 325

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++ TYSIV+D LC+ G +  A ++   M E   EPN   +  L++      + E   +++
Sbjct: 326 DLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELF 385

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + +   G + D +TY  +I    K G   +A ++   M   GC PN+ T+N+I +   + 
Sbjct: 386 SNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRN 445

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           GD + A R+  +M       ++ T+    QM +  +S D ++ L
Sbjct: 446 GDTSNAGRLIEEMVGRGFSADSSTF----QMLSDLESRDEIISL 485


>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Brachypodium distachyon]
          Length = 537

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 191/359 (53%), Gaps = 5/359 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSIL 189
           L FFNW    P + H P  Y EM+++ G++++  L     D +  + R + +T  TF++L
Sbjct: 130 LLFFNWAAGLPAYAHGPRTYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFAVL 189

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           + RY  A    EA+  F + ++YG   D + F I++  LCR +   EA++ F   KD+F 
Sbjct: 190 LNRYAGAHKVQEAIEMFYKRKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFP 249

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +  ++ GWC  G++ +A+R++ ++  + ++P+++TY   I++L + G+++ A  +
Sbjct: 250 PVIKSWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKL 309

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M E G  P+    N ++       +  + L ++ +M   GC+AD  TYN LI   CK
Sbjct: 310 FTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFREMTDRGCQADVATYNTLIKYFCK 369

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             + E   ++L+ M  KGC+PN  T++ I +   K  DV     +  +M+   C  ++ T
Sbjct: 370 IRRTEKVYELLDDMENKGCSPNNMTYSYILKTTEKPKDV---IHLLQRMEKSGCRLDSDT 426

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           YN+++ ++ + K  + V ++  EME N   P+  ++ I++      G  + A +Y   M
Sbjct: 427 YNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGRLDQALQYYTTM 485



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 4/211 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+   +    +AG  + AV  F  M E G  PD    + +I  LC K++  EA   F  +
Sbjct: 289 TYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFREM 348

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            D+  + DV  Y  L++ +C+     +   +  +M+  G  PN  TYS ++    +   +
Sbjct: 349 TDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYILKTTEKPKDV 408

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +   M + GC  +S T+N ++ ++V       V QV+++M+R G   D  ++  +
Sbjct: 409 IH---LLQRMEKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIM 465

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           +      G+L+ A++   +M  +G  P   T
Sbjct: 466 VHGLHSQGRLDQALQYYTTMKSRGMTPEPRT 496



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/290 (18%), Positives = 116/290 (40%), Gaps = 40/290 (13%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV---YTNLVRGWCRAGNISEAERVFR 276
            ++ ++ IL R ++       FD + ++    V+    +  L+  +  A  + EA  +F 
Sbjct: 148 TYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFAVLLNRYAGAHKVQEAIEMFY 207

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           + K  G + ++  + I++ +LCR   +  A  +F +                     K  
Sbjct: 208 KRKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ---------------------KKD 246

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
               V++               ++N +++  C  G L DA ++ N ++     P+  T+ 
Sbjct: 247 EFPPVIK---------------SWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYG 291

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
                ++K G ++ A +++  M +    P+    N ++      K     L + +EM + 
Sbjct: 292 TFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFREMTDR 351

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             + +V TY  LI  +C +      Y+ + +M E K   P +  Y  +L+
Sbjct: 352 GCQADVATYNTLIKYFCKIRRTEKVYELLDDM-ENKGCSPNNMTYSYILK 400



 Score = 45.8 bits (107), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMV--RKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           TY  ++D   +  K++   ++ + +   R+G      TF ++    +    V  A  M+ 
Sbjct: 148 TYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFAVLLNRYAGAHKVQEAIEMFY 207

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           K KD   E + V + IL+      K  +    L  + +++E  P + ++ I++  +C  G
Sbjct: 208 KRKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKG 266

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +A +   ++I  K LKP    Y   +  L +AG+L    +L   M ++G
Sbjct: 267 SLPDAKRIWNQIIASK-LKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKG 317


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 209/402 (51%), Gaps = 6/402 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L   + ++  P+ V    +   + + +GK+++   A   +D    R     V T++IL+ 
Sbjct: 200 LQLLDRMSVSPDVVTYNTILRTLCD-SGKLKE---AMEVLDRQMQRECYPDVITYTILIE 255

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEP 250
              +     +A+   + M + GC PD + ++++I+ +C++ R  EA  F + +     +P
Sbjct: 256 ATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQP 315

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +VI +  ++R  C  G   +AE+   EM   G  P+V T++I+I+ LCR G I RA DV 
Sbjct: 316 NVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVL 375

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M + GC PNS+++N L+    K  + E+ ++  + M   GC  D +TYN L+   CKD
Sbjct: 376 EKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKD 435

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           GK++ A+++LN +  KGC+P   T+N +   +SK+G  + A ++  +MK    +P+ +TY
Sbjct: 436 GKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITY 495

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           + L+   +     D  +    ++EE  V+PN  TY  ++   C       A  ++  M+ 
Sbjct: 496 STLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVA 555

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
             C KP  + Y ++++ L   G  ++  EL+ ++  RG   +
Sbjct: 556 RGC-KPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKK 596



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 177/367 (48%), Gaps = 3/367 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + +  + F++ M  R     +   + L+R   + G   +A      +E+ G  PD I ++
Sbjct: 125 ELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYN 184

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++IS  C+      A    D +     PDV+ Y  ++R  C +G + EA  V        
Sbjct: 185 VLISGYCKTGEIGSALQLLDRMS--VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P+V TY+I+I+A C+   + +A  +  EM + GC+P+ +T+N L+    K  R ++ +
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 302

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +  N M   GC+ + IT+N ++   C  G+  DA K L  M+RKGC+P+  TFN++   +
Sbjct: 303 RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL 362

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            + G +  A  +  KM    C PN+++YN L+      K  +  ++    M      P++
Sbjct: 363 CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDI 422

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  L+T  C  G  + A + + ++  + C  P    Y  V+  L + G+     +L++
Sbjct: 423 VTYNTLLTALCKDGKVDVAVEILNQLGSKGC-SPVLITYNTVIDGLSKVGKTDDAIKLLD 481

Query: 523 KMVDRGF 529
           +M  +G 
Sbjct: 482 EMKGKGL 488



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 167/340 (49%), Gaps = 5/340 (1%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +RR VR G   E       M   G  PD IA + +I  LC+  +  +A    + L+D   
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 250 -PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDVI Y  L+ G+C+ G I  A ++   M    + P+V TY+ ++  LC  G++  A +
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V    ++  C P+ IT+  L+    K S   + +++ ++M+  GC+ D +TYN LI+  C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G+L++AI+ LN M   GC PN  T N+I R +   G    A +   +M    C P+ V
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+NIL+            + + ++M ++   PN  +Y  L+   C       A +Y+  M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C  P    Y  +L  L + G++    E++ ++  +G
Sbjct: 414 VSRGCY-PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 138/278 (49%), Gaps = 4/278 (1%)

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           N +R   R G + E  +   +M   G  P++   + +I  LC+ G+  +A  V   + + 
Sbjct: 115 NHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDS 174

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P+ IT+N L+  + K       LQ+   + R+    D +TYN ++   C  GKL++A
Sbjct: 175 GAVPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGKLKEA 231

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           ++VL+  +++ C P+  T+ ++     K   V  A ++  +M+D  C+P+ VTYN+L+  
Sbjct: 232 MEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLING 291

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                  D  ++    M     +PNV T+ I++   C  G W +A K++ EMI + C  P
Sbjct: 292 ICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC-SP 350

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
               + +++  L R G + +  +++EKM   G T   L
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSL 388



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 127/270 (47%), Gaps = 36/270 (13%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F+  M  +    +V TF+IL+    R GL   A+    +M ++GC P+ ++++ ++ 
Sbjct: 336 AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLH 395

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS---------------- 269
            LC+ ++   A  + D +  +   PD++ Y  L+   C+ G +                 
Sbjct: 396 ALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455

Query: 270 -------------------EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
                              +A ++  EMK  G++P++ TYS ++  L R G++  A   F
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            ++ E+G +PN+IT+N++M    KA +T + +     M   GC+    +Y  LI+    +
Sbjct: 516 HDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYE 575

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           G  ++A+++LN +  +G    +S   ++ +
Sbjct: 576 GLAKEALELLNELCSRGVVKKSSAEQVVVK 605



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 33/235 (14%)

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           NN +R  V+    E+  +    M   G   D I    LI   CK GK   A +V+  +  
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMY----------------------GKMKDL-- 421
            G  P+  T+N++     K G++  A ++                       GK+K+   
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 422 --------KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
                   +C P+ +TY IL++           +KL  EM +   +P+V TY +LI   C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             G  + A +++  M    C +P    + ++L+ +   G+    E+ + +M+ +G
Sbjct: 294 KEGRLDEAIRFLNHMPSYGC-QPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347


>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 549

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 251/557 (45%), Gaps = 68/557 (12%)

Query: 16  QQIPKAYSFFSSLAPLNEDDDGD-----CVTNPNS--SPDTPFLSPEETLISEKFHSLIK 68
            QI K Y  FSS   L  +          +T P+S  SPD    SPE   +    HS   
Sbjct: 5   HQIHKLYQIFSSPKTLKSNPSLSKSLPIPLTTPHSADSPD----SPESPDLPTWLHS--- 57

Query: 69  DHHRKNPNPSSNSNPSL-NPDFTIPSLS------------------LGFSQISTAHSISP 109
                      N  P   + DF IPSL+                  L  +Q+S    +S 
Sbjct: 58  -----------NKKPEFPDGDFVIPSLADWVEHHNLGDIKEVGNHLLFHAQVSDIDRVSE 106

Query: 110 STVRH------VIE--KSCGV------------RHGIPLLQVLSFFNWVTARPEFVHSPD 149
              +H      V++    CGV            R     +  L  F W   +  +VH PD
Sbjct: 107 ILKKHYPCTDSVVQALNDCGVNPTNNLISQLLNRFCNDWVPALGLFTWAKHQTGYVHPPD 166

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           LY  M+++ G+ ++F   W  +  M++    +++ T   ++RR  RAG   +AV AF  +
Sbjct: 167 LYDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRGI 226

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E+ G   D  A ++++  L ++     A S F   KD    D   +  L+ G+C+A  + 
Sbjct: 227 EKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKARKLD 286

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++  EM   G QPNV +Y+  I+  C+         +F+EM E  C+PN IT+   M
Sbjct: 287 DARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFM 346

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA +  K L+VY  MK   C  D   Y+ LI    + G+L+DA  V   M ++G +
Sbjct: 347 HALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVS 406

Query: 390 PNASTFN-MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           P+  T+N MI    + L + N A ++  +M++  C+P+  TY  L++M    K   ++  
Sbjct: 407 PDLLTYNTMITSACTHLEEEN-ALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKF 465

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L   M +N +  ++ TY +L+   C  G    A  +  EM+  K L P    Y+M++++L
Sbjct: 466 LLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMV-MKGLIPRDRTYKMLVEEL 524

Query: 509 RRAGQLQKHEELVEKMV 525
            +   L + +E ++K++
Sbjct: 525 EQ-NNLTEAKEKIQKLM 540



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 112/241 (46%), Gaps = 2/241 (0%)

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y +++D L R  + +   ++  EM  +    + +T   +MR   +A   +  ++ +  ++
Sbjct: 168 YDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRGIE 227

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           +LG   D    N L+D   K+G +E A        +   + +  +FN++     K   ++
Sbjct: 228 KLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEF-KDSIHVDFQSFNILLHGYCKARKLD 286

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A ++  +M     +PN V+Y   ++++   K    V  +  EM+E   +PNV TY I +
Sbjct: 287 DARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFM 346

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                    N A + + EM++  C  P +S Y  ++  L ++G+L+   ++ E M  +G 
Sbjct: 347 HALGKAKQVNKALE-VYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGV 405

Query: 530 T 530
           +
Sbjct: 406 S 406


>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Glycine max]
          Length = 543

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 199/398 (50%), Gaps = 3/398 (0%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM-KSRNVEITVDTFSIL 189
            L FF W  ++  + HSP+L + M+++ GK + FD     ++ M K     +T++T + +
Sbjct: 141 ALGFFKWAKSQTGYRHSPELCNLMVDILGKCKSFDPMSDLVEEMAKLEQGYVTLETMAKV 200

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +RR  +A    +A+ AF RM+++G   D  A +++I  L +      A       K    
Sbjct: 201 IRRLAKARKHEDAIEAFRRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEFKGLIP 260

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
                +  L+ GWCRA     A +   +MK  G +P+V++Y+  I+A C      +   V
Sbjct: 261 LSSHSFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQV 320

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             EM E GC PN++T+  +M    KA +  K L+VY +MK  GC ADT  Y+ +I    K
Sbjct: 321 LEEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFILGK 380

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G+L+DA  V   M ++G   +  T+N +            A R+  +M+D  C+PN  T
Sbjct: 381 AGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGT 440

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+ L++M    K   ++  L   M +N++ P++ TY +L+   C  G   +AY ++ EM+
Sbjct: 441 YHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSFLEEMV 500

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
             K   P  S  + +  +L     L++ E  VE+ +DR
Sbjct: 501 -LKGFTPKPSTLKGLAGELESLSMLEEKER-VEEWMDR 536


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 194/379 (51%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   KV +F  A  F D  ++   + TV T++ ++    + G    A   F +ME
Sbjct: 168 FNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKME 227

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+ + ++I+I  LC+ +  +EA   F  +K K   PD+  Y +L++G C      
Sbjct: 228 EAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWK 287

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  EM    I PN++T+++++DA+C+ G+++ A  VF  M E+G EP+ +T+++LM
Sbjct: 288 EASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM 347

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             +       +  ++++ M   GC+ D  +YN LI  +CK  ++++A ++ N M+ +G  
Sbjct: 348 YGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLT 407

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   +N +   + +LG +  A  ++  M      P+  TY++L+  F          +L
Sbjct: 408 PDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRL 467

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M+   ++P++  Y ILI   C  G+  +A K   E+  +  L P   +Y  ++  L 
Sbjct: 468 FRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLL-PNVQIYTTIINNLC 526

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G L +  E    M   G
Sbjct: 527 KEGLLDEALEAFRNMEGDG 545



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 180/373 (48%), Gaps = 3/373 (0%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR-MEEYGCAP 216
           A   R  D A    + M  R     +  F+ L+   V+ G    AV + ++ ME  G +P
Sbjct: 69  ASSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSP 128

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D    SI+I      +R   A S F  + K   +PD + +  L+ G C+ G  ++A   F
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFF 188

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            + + +G QP VYTY+ +I+ LC+ G+ T A  +F +M E GC+PN +T+N L+    K 
Sbjct: 189 DDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKD 248

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               + L +++ MK      D  TYN LI   C   + ++A  +LN M      PN  TF
Sbjct: 249 KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF 308

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N++   I K G V+ A  ++  M ++  EP+ VTY+ LM  ++         KL   M  
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
              +P+  +Y ILI  YC     + A +   EMI +  L P +  Y  ++  L + G+L+
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG-LTPDNVNYNTLIHGLCQLGRLR 427

Query: 516 KHEELVEKMVDRG 528
           + ++L + M   G
Sbjct: 428 EAQDLFKNMHSNG 440



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 38/232 (16%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M ++  +    +++IL++ Y +A    EA   FN M   G  PD + ++ +I 
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 227 ILCRKRRASEAQSFFDS---------------LKDKF---------------------EP 250
            LC+  R  EAQ  F +               L D F                     +P
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP 478

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D+ +Y  L+   C+ GN+ +A ++F E+ + G+ PNV  Y+ +I+ LC+ G +  A + F
Sbjct: 479 DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG--CEADTITY 360
             M   GC P+  ++N ++R  ++     +  Q+  +M+  G   EA T T+
Sbjct: 539 RNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTTW 590


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 195/379 (51%), Gaps = 2/379 (0%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +I+   ++ + + A H + LM+ +     V ++S ++  Y R G   +      +M+
Sbjct: 672  YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK 731

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
            + G  P+   +  +I +LCR  + +EA+ +F + +     PD IVYT LV G+C+ G+I 
Sbjct: 732  QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             A + F EM    I P+V TY+ +I   C+ G +  A  +F EML  G EP+ ITF  LM
Sbjct: 792  AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELM 851

Query: 330  RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              + KA   +   +V+N M + GC  + +TY  LID  CK+G L+ A ++L+ M + G  
Sbjct: 852  NGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911

Query: 390  PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            PN  T+N I   + K G++  A ++ G+ +      +TVTY  LM  +  S   D   ++
Sbjct: 912  PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971

Query: 450  KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              EM    ++P + T+ +L+  +C  G   +  K +  M+  K + P ++ +  +++Q  
Sbjct: 972  LTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNCLVKQYC 1030

Query: 510  RAGQLQKHEELVEKMVDRG 528
                L+    + + M  RG
Sbjct: 1031 IRNNLKAATAIYKDMCSRG 1049



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 197/424 (46%), Gaps = 39/424 (9%)

Query: 146  HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            ++PD+  Y  +IN   +  + D  W  I+ MK + ++    T+  ++    R    AEA 
Sbjct: 700  YTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAE 759

Query: 204  HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---------------- 247
             AF+ M   G  PD I ++ ++   C++     A  FF  +  +                
Sbjct: 760  EAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 819

Query: 248  --------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
                                 EPD+I +T L+ G+C+AG+I +A RV   M  AG  PNV
Sbjct: 820  CQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879

Query: 288  YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             TY+ +ID LC+ G +  A+++  EM ++G +PN  T+N+++    K+   E+ +++  +
Sbjct: 880  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 939

Query: 348  MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
             +  G  ADT+TY  L+D +CK G+++ A ++L  M+ KG  P   TFN++       G 
Sbjct: 940  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999

Query: 408  VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            +    ++   M      PN  T+N L++ +    +      + K+M    VEP+  TY  
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYEN 1059

Query: 468  LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            L+  +C   +   A+   +EM + K      S Y ++++   +  +  +  E+ ++M   
Sbjct: 1060 LVKGHCNARNMKEAWFLFQEM-KGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRD 1118

Query: 528  GFTA 531
            G  A
Sbjct: 1119 GLAA 1122



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 190/424 (44%), Gaps = 26/424 (6%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR---NV-EITVDTF 186
           VL FF+W  +R +   + +    +I+LA   +   +A   I     R   NV E  V  F
Sbjct: 527 VLDFFDWARSRRD--SNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFF 584

Query: 187 SILVRRY-----------------VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +LV  Y                 V  G+  EA   F +M  YG      + ++ ++ L 
Sbjct: 585 DLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLS 644

Query: 230 R--KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           +   + A+    F +  +     +V  Y  ++   C+ G I+EA  +   M++ G  P+V
Sbjct: 645 KDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDV 704

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            +YS VI+  CR G++ +   +  +M + G +PNS T+ +++ +  +  +  +  + +++
Sbjct: 705 ISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSE 764

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M   G   DTI Y  L+D  CK G +  A K    M  +   P+  T+  I     ++GD
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +  A +++ +M     EP+ +T+  LM  +  +       ++   M +    PNV TY  
Sbjct: 825 MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI   C  G  ++A + + EM +   L+P    Y  ++  L ++G +++  +LV +    
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 943

Query: 528 GFTA 531
           G  A
Sbjct: 944 GLNA 947



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 113/254 (44%), Gaps = 3/254 (1%)

Query: 147  SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            SP++  Y  +I+   K    D A   +  M    ++  + T++ +V    ++G   EAV 
Sbjct: 876  SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 935

Query: 205  AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
                 E  G   D + ++ ++   C+     +AQ     +  K  +P ++ +  L+ G+C
Sbjct: 936  LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFC 995

Query: 264  RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
              G + + E++   M   GI PN  T++ ++   C    +  A  ++ +M   G EP+  
Sbjct: 996  LHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055

Query: 324  TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            T+ NL++ H  A   ++   ++ +MK  G      TY+ LI    K  K  +A ++ + M
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115

Query: 384  VRKGCNPNASTFNM 397
             R G   +   F+ 
Sbjct: 1116 RRDGLAADKEIFDF 1129



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y  +++   K  + D A   +  M  + ++ T+ TF++L+  +   G+  +     N M 
Sbjct: 952  YTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              G AP+   F+ ++   C +     A + + D      EPD   Y NLV+G C A N+ 
Sbjct: 1012 AKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMK 1071

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            EA  +F+EMK  G   +V TYS++I    +  +   A ++F +M   G   +   F+   
Sbjct: 1072 EAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFS 1131

Query: 330  RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
                K  R + ++             D I  N+L+D
Sbjct: 1132 DTKYKGKRPDTIVD----------PIDEIIENYLVD 1157


>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 537

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 191/359 (53%), Gaps = 5/359 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSIL 189
           L FF W    P + H P  Y EM+++ G++++  L     D +  + R + +T   F++L
Sbjct: 130 LLFFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMFAVL 189

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           + RY  A    EA+  F +  +YG   D + F I++  LCR +   EA++ F   KD+F 
Sbjct: 190 LNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFP 249

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +  ++ GWC  G++ +A+RV+ E+  + ++P+++TY   I+AL + G+++ A  +
Sbjct: 250 PVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKLSTAVKL 309

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M E G  P+    N ++       +  + L+++ +M   GC+AD  TYN LI   CK
Sbjct: 310 FTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEMNDRGCQADVATYNTLIKHFCK 369

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             + E   ++L+ M +KGC+PN  T+  I +   K  DV     +  +M++  C+ ++ T
Sbjct: 370 IRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRDV---MNLIQRMEESGCKLDSDT 426

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           YN+++ ++ + K    V ++ +EME N   P+  ++ I++      G  + A +Y   M
Sbjct: 427 YNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMVHGLHSQGQLDQALQYYTTM 485



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/308 (18%), Positives = 125/308 (40%), Gaps = 43/308 (13%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVI---VYTNLVRGWCRAGNISEAERVFREMKM 280
           ++ IL R ++    +  FD + ++    V+   ++  L+  +  A  + EA  +F +   
Sbjct: 152 MLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRND 211

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G + ++  + I++ +LCR   +  A  +F +                     K      
Sbjct: 212 YGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ---------------------KKDEFPP 250

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           V++               ++N +++  C  G L DA +V N ++     P+  T+     
Sbjct: 251 VIK---------------SWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFIN 295

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            ++K G ++ A +++  M +    P+    N ++      K     LK+  EM +   + 
Sbjct: 296 ALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEMNDRGCQA 355

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +V TY  LI  +C +      Y+ + +M E+K   P +  Y  +L+   +   +     L
Sbjct: 356 DVATYNTLIKHFCKIRRTEKVYELLDDM-EKKGCSPNNMTYTYILKTTEKPRDVM---NL 411

Query: 521 VEKMVDRG 528
           +++M + G
Sbjct: 412 IQRMEESG 419



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 87/226 (38%), Gaps = 39/226 (17%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+   +    +AG  + AV  F  M E G  PD    + +I  LC K++  EA   F  +
Sbjct: 289 TYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEM 348

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            D+  + DV  Y  L++ +C+     +   +  +M+  G  PN  TY+ ++    +   +
Sbjct: 349 NDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRDV 408

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVK----------------------------- 334
               ++   M E GC+ +S T+N ++ ++V                              
Sbjct: 409 M---NLIQRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIM 465

Query: 335 ------ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
                   + ++ LQ Y  MK  G   +  T   +   H K G  E
Sbjct: 466 VHGLHSQGQLDQALQYYTTMKSRGMTPEPRTRILVKAIHIKKGGPE 511



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 31/166 (18%), Positives = 70/166 (42%), Gaps = 2/166 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R  +  V T++ L++ + +     +     + ME+ GC+P+ + ++ ++    + R 
Sbjct: 348 MNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRD 407

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
                   +    K + D   Y  ++  +         ++V+ EM+  G  P+  +++I+
Sbjct: 408 VMNLIQRMEESGCKLDSDT--YNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIM 465

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
           +  L   GQ+ +A   +  M   G  P   T   +  +H+K    E
Sbjct: 466 VHGLHSQGQLDQALQYYTTMKSRGMTPEPRTRILVKAIHIKKGGPE 511


>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
 gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 228/464 (49%), Gaps = 22/464 (4%)

Query: 82  NPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVR----HGIP-----LLQVL 132
           NP+L     +PS  L   Q+S A  +S    +    ++  V+     GI      + Q+L
Sbjct: 36  NPNLETHRNVPSPLLFEPQVSNADKLSEILKKRYSSEAAVVKALNESGIDATNELVSQIL 95

Query: 133 SFFN-----------WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
             F+           W   +  +VH+P+LY  MI++ GK ++F L W  ++ MK  N  +
Sbjct: 96  MRFDSHCVVAFGVFIWAKNQTSYVHTPELYDYMIDILGKFKKFSLMWSLVEQMKGLNGYV 155

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           ++ T S ++RR  +A    +A+  F  +E+YG + D+ A ++++  L ++    +A S F
Sbjct: 156 SLATASKVMRRLAKARKYKDAIDVFRGIEKYGASKDREALNVLMDALVKEGDVEDAHSAF 215

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
              KD    D   +  L+ G+C+A     A ++  EM+  G  P+V +YS  I A C   
Sbjct: 216 LEFKDCITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQK 275

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
                  VF EM E GC+PN IT+  +M    KA +  + L+VY +MKR GC  D+  Y+
Sbjct: 276 DFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYS 335

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI    + G+++DA  V   M ++G   N   +N +            A ++  +M+  
Sbjct: 336 SLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGD 395

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C+P+  TY  L++M    KS  ++  L   M +N V  ++ TY +L+  +C  G   +A
Sbjct: 396 SCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHA 455

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             Y +E +  K + P    ++ ++++L +   +++ +E +EK++
Sbjct: 456 CFYFQEAV-LKGMVPMVKTFKALVEELEQKN-MKEMKEKIEKLM 497



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 2/182 (1%)

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           QMK L       T + ++    K  K +DAI V   + + G + +    N++   + K G
Sbjct: 147 QMKGLNGYVSLATASKVMRRLAKARKYKDAIDVFRGIEKYGASKDREALNVLMDALVKEG 206

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           DV  AH  + + KD     ++ ++NIL+  +  ++   +  K+ +EME++   P+V +Y 
Sbjct: 207 DVEDAHSAFLEFKDC-ITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYS 265

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
             I  YC    + N      EM E+ C KP    Y  V+  L +A QL +  E+ EKM  
Sbjct: 266 CFIAAYCEQKDFRNVEAVFDEMQEKGC-KPNVITYTTVMHALGKARQLNEALEVYEKMKR 324

Query: 527 RG 528
            G
Sbjct: 325 NG 326


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 190/372 (51%), Gaps = 2/372 (0%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           +GK R        ++ M+S  +   + T++I +R   R G   EA     RM++ GC PD
Sbjct: 239 SGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPD 298

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + ++++I  LC  R+  +A   F  +K    +PD + Y  L+  +   G++ + E+++ 
Sbjct: 299 VVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWT 358

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EM+  G  P+V T++I+++ALC+ G+I  A D+   M + G  PN  T+N L+   ++A+
Sbjct: 359 EMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRAN 418

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           R +  L +++ M+ LG E    TY  LID H K G    A++    M  +G  PN    N
Sbjct: 419 RLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACN 478

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
                ++++G +  A  M+ ++K     P++VTYN++M+ ++     D  +KL  EM + 
Sbjct: 479 ASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKV 538

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
           + EP+V     LI      G    A++    M EE  L P    Y ++L  L + GQ+QK
Sbjct: 539 QCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM-EEMNLAPTVVTYNILLAGLGKEGQIQK 597

Query: 517 HEELVEKMVDRG 528
             +L E M   G
Sbjct: 598 AVQLFESMNGHG 609



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 190/385 (49%), Gaps = 4/385 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           ++PD+  +  ++N   K  + + A+  +D M+ + V   + T++ L+   +RA    +A+
Sbjct: 365 YAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDAL 424

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             F+ ME  G  P    + ++I    +     +A   F+ +K +   P+++     +   
Sbjct: 425 DLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSL 484

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
              G + EA+ +F E+K +G+ P+  TY++++    + GQ+  A  + +EM +V CEP+ 
Sbjct: 485 AEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDV 544

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           I  N+L+    KA R E+  Q++ +M+ +      +TYN L+    K+G+++ A+++  S
Sbjct: 545 IVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFES 604

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC+PN  TFN +  C+ K  +V+ A +M+ KM  + C P+ +T+N ++  F     
Sbjct: 605 MNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQ 664

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
               + L  +M++  + P+  T   L+      G   +A++   +   +       S +E
Sbjct: 665 IKNAIWLFHQMKK-LLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWE 723

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDR 527
            V+  +      +K     E++V R
Sbjct: 724 DVMGGILTEAGTEKAILFGERLVCR 748



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 197/442 (44%), Gaps = 40/442 (9%)

Query: 121 GVRHGIP-LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF-DLAWHFIDLMKSRN 178
           GV H I   +  L +F  V   P  VH+ +  + M+ +    R+  D+A+ F DLM+ + 
Sbjct: 96  GVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVF-DLMQRQI 154

Query: 179 VEITVDTFSILVRR-YVRAGL----------------------------------AAEAV 203
           +   VDT+ I+ +  ++R GL                                    EA+
Sbjct: 155 IRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEAL 214

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
             + RM   G  P    FS ++    ++R         + ++     P++  YT  +R  
Sbjct: 215 EVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVL 274

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            R G I EA R+ + M   G  P+V TY+++IDALC   ++  A  +F +M     +P+ 
Sbjct: 275 GRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDK 334

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+  L+         +KV +++ +M+  G   D +T+  L++  CK G++ +A  +L++
Sbjct: 335 VTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDT 394

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M ++G  PN  T+N +   + +   ++ A  ++  M+ L  EP   TY +L+     S  
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGH 454

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
               L+  ++M+   + PN+      +     MG    A     E+ +   L P S  Y 
Sbjct: 455 PGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL-KSSGLAPDSVTYN 513

Query: 503 MVLQQLRRAGQLQKHEELVEKM 524
           M+++   + GQ+ +  +L+ +M
Sbjct: 514 MMMKCYSKVGQVDEAIKLLSEM 535



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 160/313 (51%), Gaps = 4/313 (1%)

Query: 214  CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEA 271
            C  D +   I I +LC+ ++ S A++ F     +   +P + VY  L+ G+    N+  A
Sbjct: 751  CKDDSVLIPI-IKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVA 809

Query: 272  ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
              +F EMK AG  P+ +TY+ +IDA  + G+I    D++ EML  GC+PN+IT+N ++  
Sbjct: 810  WNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISN 869

Query: 332  HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             VK++R +K + +Y  +          T+  LID   K G+L+DA ++ + MV  GC PN
Sbjct: 870  LVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPN 929

Query: 392  ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
            ++ +N++     KLG V+ A   + +M      P+  +Y IL+ +   +   D  L   +
Sbjct: 930  SAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFE 989

Query: 452  EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            ++++  ++P++  Y ++I           A     EM + + + P    Y  ++  L   
Sbjct: 990  KLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM-QNRGIVPDLYTYNSLILNLGIV 1048

Query: 512  GQLQKHEELVEKM 524
            G +++  ++ E++
Sbjct: 1049 GMIEEAGKIYEEL 1061



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 163/317 (51%), Gaps = 1/317 (0%)

Query: 150  LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            +Y+ +I+   +V   ++AW+  + MKS        T++ L+  + ++G   E    ++ M
Sbjct: 792  VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEM 851

Query: 210  EEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
               GC P+ I +++VIS L +  R  +A   +++ +   F P    +  L+ G  ++G +
Sbjct: 852  LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRL 911

Query: 269  SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             +A  +F  M   G +PN   Y+I+++   + G +  A + F  M++ G  P+  ++  L
Sbjct: 912  DDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTIL 971

Query: 329  MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
            + +   A R +  L  + ++K+ G + D + YN +I+   +  + E+A+ + + M  +G 
Sbjct: 972  VDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGI 1031

Query: 389  NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             P+  T+N +   +  +G +  A ++Y +++ +  +PN  TYN L++ +  S ++++   
Sbjct: 1032 VPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYG 1091

Query: 449  LKKEMEENEVEPNVNTY 465
            + K+M     +PN  T+
Sbjct: 1092 IYKKMMVGGCDPNTGTF 1108



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 179/398 (44%), Gaps = 40/398 (10%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           +KS  +     T++++++ Y + G   EA+   + M +  C PD I  + +I  L +  R
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGR 559

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   F  +++    P V+ Y  L+ G  + G I +A ++F  M   G  PN  T++ 
Sbjct: 560 VEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNT 619

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++D LC+  ++  A  +F +M  + C P+ +TFN ++   +K ++ +  + +++QMK+L 
Sbjct: 620 LLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL- 678

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIK--------------------VLNSMVRKGCNPNA 392
              D +T   L+    K G++EDA +                    V+  ++ +     A
Sbjct: 679 LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKA 738

Query: 393 STFN--MIFRCISKLGDV--------------NGAHRMYGKM-KDLKCEPNTVTYNILMQ 435
             F   ++ R I K   V              + A  ++ K  K+L  +P    YN+L+ 
Sbjct: 739 ILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLID 798

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            F    + ++   L +EM+     P+  TY  LI  +   G  N  +    EM+   C K
Sbjct: 799 GFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGC-K 857

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           P +  Y MV+  L ++ +L K  +L   +V   F+  P
Sbjct: 858 PNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTP 895



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/476 (22%), Positives = 203/476 (42%), Gaps = 49/476 (10%)

Query: 98  FSQISTAHSISPSTVRHVIEKSCGVRHGI--PLLQVLSFFNWVTARPEFVHSPDLYHEMI 155
           F+++ ++  ++P +V + +   C  + G     +++LS  + V   P+ +    + + +I
Sbjct: 497 FNELKSS-GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVI----VINSLI 551

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           +   K  + + AW     M+  N+  TV T++IL+    + G   +AV  F  M  +GC+
Sbjct: 552 DTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCS 611

Query: 216 PDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+ I F+ ++  LC+      A + F+        PDV+ +  ++ G+ +   I  A  +
Sbjct: 612 PNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWL 671

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRA--------------------HDVFAEML 314
           F +MK   ++P+  T   ++  + + GQI  A                     DV   +L
Sbjct: 672 FHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGIL 730

Query: 315 EVGCEPNSITFNN----------------LMRVHVKASRTEKVLQVYNQM-KRLGCEADT 357
                  +I F                  +++V  K  +T     V+ +  K LG +   
Sbjct: 731 TEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTL 790

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
             YN LID   +   +E A  +   M   GC P+  T+N +     K G +N    +Y +
Sbjct: 791 KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M    C+PNT+TYN+++     S   D  + L   +   +  P   T+  LI      G 
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            ++A++    M+   C +P S++Y +++    + G +    E  ++MV  G   RP
Sbjct: 911 LDDAHEMFDGMVHYGC-RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI--RP 963



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 158/339 (46%), Gaps = 2/339 (0%)

Query: 170  FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            F+   K   V+ T+  +++L+  ++       A + F  M+  GCAPD   ++ +I    
Sbjct: 777  FVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHG 836

Query: 230  RKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            +  + +E    +D +  +  +P+ I Y  ++    ++  + +A  ++  +      P   
Sbjct: 837  KSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896

Query: 289  TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            T+  +ID L + G++  AH++F  M+  GC PNS  +N L+  + K    +   + + +M
Sbjct: 897  TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956

Query: 349  KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             + G   D  +Y  L+D  C  G+++DA+     + + G +P+   +N++   + +    
Sbjct: 957  VKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRT 1016

Query: 409  NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
              A  ++ +M++    P+  TYN L+         +   K+ +E++   ++PNV TY  L
Sbjct: 1017 EEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNAL 1076

Query: 469  ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            I  Y   G+   AY   ++M+   C  P +  +  +  Q
Sbjct: 1077 IRGYTLSGNSELAYGIYKKMMVGGC-DPNTGTFAQLPNQ 1114



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 21/283 (7%)

Query: 149  DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
            DLY EM+                    +R  +    T+++++   V++    +A+  +  
Sbjct: 846  DLYDEML--------------------TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885

Query: 209  MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGN 267
            +     +P    F  +I  L +  R  +A   FD +      P+  +Y  LV G+ + G+
Sbjct: 886  LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945

Query: 268  ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            +  A   F+ M   GI+P++ +Y+I++D LC  G++  A   F ++ + G +P+ + +N 
Sbjct: 946  VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005

Query: 328  LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
            ++    ++ RTE+ L ++++M+  G   D  TYN LI      G +E+A K+   +   G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065

Query: 388  CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
              PN  T+N + R  +  G+   A+ +Y KM    C+PNT T+
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 3/228 (1%)

Query: 134  FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
            ++N V+   +F  +P  +  +I+   K  + D A    D M           ++ILV  Y
Sbjct: 883  YYNLVSG--DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGY 940

Query: 194  VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
             + G    A   F RM + G  PD  +++I++ ILC   R  +A  +F+ LK    +PD+
Sbjct: 941  GKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDL 1000

Query: 253  IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
            + Y  ++ G  R+    EA  +F EM+  GI P++YTY+ +I  L   G I  A  ++ E
Sbjct: 1001 VAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEE 1060

Query: 313  MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +  +G +PN  T+N L+R +  +  +E    +Y +M   GC+ +T T+
Sbjct: 1061 LQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 101/180 (56%), Gaps = 1/180 (0%)

Query: 150  LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            +Y+ ++N  GK+   D A  F   M    +   + +++ILV     AG   +A+H F ++
Sbjct: 932  IYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL 991

Query: 210  EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            ++ G  PD +A++++I+ L R +R  EA S F  ++++   PD+  Y +L+      G I
Sbjct: 992  KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMI 1051

Query: 269  SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             EA +++ E++  G++PNV+TY+ +I      G    A+ ++ +M+  GC+PN+ TF  L
Sbjct: 1052 EEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           VF  M+   I+ NV TY I+  +L   G + +A     +M E G   N+ ++N L+   +
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           ++   ++ L+VY +M   G +    T++ L+    K   ++  + +L  M   G  PN  
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY 265

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T+ +  R + + G ++ A+R+  +M D  C P+ VTY +L+    T++  D  + L  +M
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           + +  +P+  TY  L+  +   GH +   K   EM E     P    + +++  L +AG+
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM-EADGYAPDVVTFTILVNALCKAGR 384

Query: 514 LQKHEELVEKMVDRG 528
           + +  +L++ M  +G
Sbjct: 385 INEAFDLLDTMRKQG 399


>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Glycine max]
          Length = 558

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 196/397 (49%), Gaps = 2/397 (0%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF W  +   + HSP+LY+ M+++ GK R FD     ++ M      +T++T + ++
Sbjct: 144 ALGFFKWAKSLTGYRHSPELYNLMVDILGKCRSFDSMSELVEEMARLEGYVTLETMTKVM 203

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RR  RA    +A+ AF RME++G   D  A +++I  L +      A       K     
Sbjct: 204 RRLARARKHEDAIEAFGRMEKFGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGSIPL 263

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
               +  L+ GWCRA +   A +   +MK  G +P+V++Y+  I+A        +   V 
Sbjct: 264 SSRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVL 323

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM E GC PN++T+ ++M    KA +  K L+VY +MK  GC ADT  Y+ +I    K 
Sbjct: 324 EEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKA 383

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+L+DA  V   M ++G   +  T+N +            A R+  +M+D  C+PN  TY
Sbjct: 384 GRLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTY 443

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           + L++M    K   ++  L   M +N + P++ TY +L+      G   +AY ++ EM+ 
Sbjct: 444 HRLLKMCCKKKRMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEEMV- 502

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            +   P  S  + +  +L     L++    VE+ +DR
Sbjct: 503 LRGFTPKPSTLKKLAGELESKSMLEEKVR-VEEWMDR 538


>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 205/393 (52%), Gaps = 3/393 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMK-SRNVEITVDTFSILVRR 192
           FF W  + P F HS   +H ++ + G  +QF + W F+  M+ S + EI  + F ++ R 
Sbjct: 97  FFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRA 156

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
           Y +A L   A+ +FNRM+E+G  P       ++ ILC+++   +AQ  F   K++F    
Sbjct: 157 YSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTA 216

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             Y+ L+ GW   G+  +A  +F+ M   G   ++  Y+ ++ ALC+ G++  A ++F +
Sbjct: 217 KTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHD 276

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           ML    EP++ T++  +  +  A   +   +V ++M+R     +  TYN +I   CK+  
Sbjct: 277 MLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEH 336

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +E+A ++L+ M+ +G  P+  ++N I        +VN A R+  +M+   C P+  TYN+
Sbjct: 337 VEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNM 396

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC-GMGHWNNAYKYIREMIEE 491
           ++++       D V ++ + M + +  P+V+TY ++I  +C   G    A KY   MI+E
Sbjct: 397 VLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDE 456

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             + P  +  EM+  +L   G +   E L  KM
Sbjct: 457 G-IPPYVTTVEMLRNRLLGLGFIDHIEILAAKM 488



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 148/313 (47%), Gaps = 4/313 (1%)

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
           ++F I++ IL   ++ +    F   +++   +E +  ++  + R + +A     A R F 
Sbjct: 112 MSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFN 171

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            M   G++P ++    ++  LC+   + +A  +F +  +      + T++ L+    +  
Sbjct: 172 RMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQA-KNRFSLTAKTYSILISGWGEIG 230

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
            +EK   ++  M   GC  D + YN L+   CK G++++A  + + M+ K   P+A T++
Sbjct: 231 DSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYS 290

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           +         DV  A R+  KM+     PN  TYN +++    ++  +   +L  EM   
Sbjct: 291 IFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISR 350

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            V+P+  +Y  +   +C     N A + +  M ++ CL P    Y MVL+ L R G+  K
Sbjct: 351 GVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICL-PDRHTYNMVLKLLIRIGRFDK 409

Query: 517 HEELVEKMVDRGF 529
             E+ E MVD+ F
Sbjct: 410 VTEVWENMVDKKF 422



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 37/276 (13%)

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
           +T  T+SIL+  +   G + +A   F  M E GC  D +A++ ++  LC+  R  EA++ 
Sbjct: 214 LTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNI 273

Query: 241 F-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D L  + EPD   Y+  +  +C A ++  A RV  +M+   + PNV+TY+ +I  LC+
Sbjct: 274 FHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCK 333

Query: 300 CGQITRAHDVFAEMLEVG-----------------------------------CEPNSIT 324
              +  A+ +  EM+  G                                   C P+  T
Sbjct: 334 NEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHT 393

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD-GKLEDAIKVLNSM 383
           +N ++++ ++  R +KV +V+  M          TY+ +I   CK  GKLE+A K    M
Sbjct: 394 YNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMM 453

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           + +G  P  +T  M+   +  LG ++    +  KM+
Sbjct: 454 IDEGIPPYVTTVEMLRNRLLGLGFIDHIEILAAKMR 489


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 192/379 (50%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +IN   KV +F  A    D M +R     V T++ ++    + G  A A     +ME
Sbjct: 171 FTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKME 230

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+ + +S +I    + RR +EA   F  +K K   PD+  Y +L++G C      
Sbjct: 231 EAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWK 290

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  EM+   I P++ T+++++D +C+ G+++ A  V   M E+G EP+ +T+++LM
Sbjct: 291 EASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             +   S   +  ++++ M   GC+ D  +YN LI+ +CK  ++++A ++ N M+ +G  
Sbjct: 351 YGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLT 410

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  ++N +   + +LG +  A  ++  M      PN  TY+IL+  F          +L
Sbjct: 411 PNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRL 470

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M+    +PN+  Y ILI   C  G+  +A K   E+   K L+P + +Y  ++  L 
Sbjct: 471 FRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELF-VKGLQPNAQIYTTIINGLC 529

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G L +  E    M + G
Sbjct: 530 KEGLLDEALEAFRNMEEDG 548



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 179/373 (47%), Gaps = 3/373 (0%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR-MEEYGCAP 216
           A   R  D A    + M  R     +  F+ L+   V+ G   + V +  + ME  G +P
Sbjct: 72  ACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSP 131

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           +    SI+I+     +R   A S    + K   +P ++ +T L+   C+ G  ++A  +F
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M   G +P+VYTY+ +I+ LC+ G+   A  +  +M E GC+PN +T++ ++  H K 
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R  + L +++ MK  G   D  TYN LI   C   + ++A  +LN M      P+  TF
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N++   I K G V+ A  +   M ++  EP+ VTY+ LM  ++         KL   M  
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMIT 371

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
              +P+V +Y ILI  YC +   + A +   EMI +  L P +  Y  ++  L + G L+
Sbjct: 372 KGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG-LTPNNVSYNTLIHGLCQLGSLR 430

Query: 516 KHEELVEKMVDRG 528
           +   L + M   G
Sbjct: 431 EARNLFKNMHTNG 443



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 204/442 (46%), Gaps = 53/442 (11%)

Query: 124 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 183
           H  PL  ++ F   ++A    V     Y  +I+L    +Q +LA           +   +
Sbjct: 90  HRKPLPCIIQFTKLLSA---IVKMGQYYDTVISLT---KQMELA----------GLSPNI 133

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
            T SIL+  +        A     ++ + G  P  + F+ +I+ LC+  + ++A   FD 
Sbjct: 134 YTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDD 193

Query: 244 LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +  +   PDV  YT ++ G C+ G  + A  + ++M+ AG QPNV TYS +ID+  +  +
Sbjct: 194 MVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRR 253

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A D+F+ M   G  P+  T+N+L++     S+ ++   + N+M+ L    D +T+N 
Sbjct: 254 VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNV 313

Query: 363 LIDCHCKDGKLEDAIKVL-----------------------------------NSMVRKG 387
           L+D  CK+GK+ +A  VL                                   ++M+ KG
Sbjct: 314 LVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG 373

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
           C P+  ++N++     K+  ++ A +++ +M      PN V+YN L+       S     
Sbjct: 374 CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREAR 433

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L K M  N   PN+ TY IL+  +C  G++  A++  R M +    KP   +Y +++  
Sbjct: 434 NLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM-QSTYSKPNLVMYNILIDA 492

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           + ++G L+   +L  ++  +G 
Sbjct: 493 MCKSGNLRDARKLFSELFVKGL 514



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 3/321 (0%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +I       Q+  A   ++ M+S N+   + TF++LV    + G  +EA  
Sbjct: 270 SPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQG 329

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M E G  PD + +S ++     +    EA+  FD++  K  +PDV  Y  L+ G+C
Sbjct: 330 VLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC 389

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   I EA+++F EM   G+ PN  +Y+ +I  LC+ G +  A ++F  M   G  PN  
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF 449

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T++ L+    K     K  +++  M+    + + + YN LID  CK G L DA K+ + +
Sbjct: 450 TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  PNA  +  I   + K G ++ A   +  M++  C P+ ++YN++++ F   K  
Sbjct: 510 FVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDE 569

Query: 444 DMVLKLKKEMEENEVEPNVNT 464
              ++L  EM +     +V T
Sbjct: 570 SRAVQLIGEMRDKGFIADVGT 590



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 2/165 (1%)

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD-VNGAHRMYGKMKDLKC 423
           D  C    ++DA+   N M+ +   P    F  +   I K+G   +    +  +M+    
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN  T +IL+  F+  +  D+   +  ++ +  ++P + T+  LI   C +G +  A +
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +M+   C +P    Y  ++  L + G+      L++KM + G
Sbjct: 190 LFDDMVARGC-RPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG 233


>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 234/484 (48%), Gaps = 36/484 (7%)

Query: 44  NSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQIST 103
            S P  PFL  E + I       + D  R+NP+                 L +G S  S+
Sbjct: 42  GSDPTLPFLVSEISRI-------LSD--RRNPHHD---------------LEVGLSSFSS 77

Query: 104 AHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ 163
             ++S   V  V+++   +           FF W    P F  S D YH ++++ G   Q
Sbjct: 78  --NVSTDLVEQVLKRCKNI-----AFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGSSGQ 130

Query: 164 FDLAWHF-IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           F + W F I++ ++R+  IT + F  +   Y RA L  +A+ AFNRM E+G         
Sbjct: 131 FAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLD 190

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
            ++  LC+++  + AQ FFD +K  F P V  Y+ L RGW   G+ + A++VF EM+  G
Sbjct: 191 KLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERG 250

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
              +V  Y+ +++ALC+ G+   A+ +F EM   G +P++ T++  +R   + +    V 
Sbjct: 251 CLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVY 310

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +V  + KR     +  TYN +I   CKD  +E+A ++L+ M+ +G  P+  ++N I    
Sbjct: 311 RVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYH 370

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
               +VN A  +  +M   KC P+  TYN+++++       D   ++ + M +    P+V
Sbjct: 371 CDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSV 430

Query: 463 NTYRILITMYCGMGHWN--NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +TY ++I  +C    W    A KY   MI+E  + P  +  E++  +L   G   +   L
Sbjct: 431 STYAVMIHGFCK-KKWKLEEACKYFEMMIDEG-IPPYIATVELLRDRLLGIGFKDQVAIL 488

Query: 521 VEKM 524
            +KM
Sbjct: 489 GDKM 492



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 148/319 (46%), Gaps = 4/319 (1%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI--VYTNLVRGWCRAGNISE 270
           G  P   ++ IV+ IL    + +    F   +++     +   ++ ++   + RA    +
Sbjct: 110 GFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQD 169

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A R F  M   GI+  V     ++  LC+   +  A   F ++  V   P+  T++ L R
Sbjct: 170 AIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV-FNPSVKTYSILTR 228

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
                  +    +V+++M+  GC  D + YN L++  CK GK ++A K+   M   G +P
Sbjct: 229 GWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDP 288

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +A T+++  R   +  D++  +R+  + K     PN  TYN +++     ++ +   ++ 
Sbjct: 289 DADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQIL 348

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            EM E  V P+  +Y  +   +C     N+A   ++ M  +KC+ P    Y MVL+ L R
Sbjct: 349 DEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCV-PDKHTYNMVLKLLVR 407

Query: 511 AGQLQKHEELVEKMVDRGF 529
            G+  +  E+ E M  RGF
Sbjct: 408 VGRFDRANEVWESMGKRGF 426


>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
          Length = 535

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDL--MKSRNVEITVDTFSIL 189
           LSFF W    P++ H    Y EM+++ G++++  L     D   M+SR   IT   F++L
Sbjct: 130 LSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVL 189

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           + RY  A    EA+  F + ++YG   D + F I++  LCR +   EA++ F   KD+F 
Sbjct: 190 LNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFP 249

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +  ++ GWC  G++++A+RV+ E+  + ++P+++TY   I++L + G+++ A  +
Sbjct: 250 PVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKL 309

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M E G  P+    N ++       R  + L+++ +M   GC+AD  TYN LI   CK
Sbjct: 310 FTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCK 369

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             ++E   ++L+ M  KG +PN  T++ I +   K  DV     +  +M+   C  ++ T
Sbjct: 370 INRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVIS---LMQRMEKSGCRLDSDT 426

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN+++ ++ +      V  +  EME N   P+  ++ I++      G  + A  Y R M 
Sbjct: 427 YNLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHGKLDEALHYYRTM- 485

Query: 490 EEKCLKP 496
           E + + P
Sbjct: 486 ESRGMTP 492



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 8/126 (6%)

Query: 410 GAHR------MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           GAH+      M+ K KD   E + V + IL+      K  +    L  + +++E  P + 
Sbjct: 195 GAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIK 253

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           ++ I++  +C  G   +A +   E+I  K LKP    Y   +  L ++G+L    +L   
Sbjct: 254 SWNIILNGWCVKGSLADAKRVWNEIIASK-LKPDLFTYGTFINSLTKSGKLSTAVKLFTS 312

Query: 524 MVDRGF 529
           M ++G 
Sbjct: 313 MWEKGI 318


>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 234/484 (48%), Gaps = 36/484 (7%)

Query: 44  NSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQIST 103
            S P  PFL  E + I       + D  R+NP+                 L +G S  S+
Sbjct: 42  GSDPTLPFLVSEISRI-------LSD--RRNPHHD---------------LEVGLSSFSS 77

Query: 104 AHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ 163
             ++S   V  V+++   +           FF W    P F  S D YH ++++ G   Q
Sbjct: 78  --NVSTDLVEQVLKRCKNI-----AFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGGSGQ 130

Query: 164 FDLAWHF-IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           F + W F I++ ++R+  IT + F  +   Y RA L  +A+ AFNRM E+G         
Sbjct: 131 FAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLD 190

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
            ++  LC+++  + AQ FFD +K  F P V  Y+ L RGW   G+ + A++VF EM+  G
Sbjct: 191 KLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERG 250

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
              +V  Y+ +++ALC+ G+   A+ +F EM   G +P++ T++  +R   + +    V 
Sbjct: 251 CLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVY 310

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +V  + KR     +  TYN +I   CKD  +E+A ++L+ M+ +G  P+  ++N I    
Sbjct: 311 RVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYH 370

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
               +VN A  +  +M   KC P+  TYN+++++       D   ++ + M +    P+V
Sbjct: 371 CDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSV 430

Query: 463 NTYRILITMYCGMGHWN--NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +TY ++I  +C    W    A KY   MI+E  + P  +  E++  +L   G   +   L
Sbjct: 431 STYAVMIHGFCK-KKWKLEEACKYFEMMIDEG-IPPYIATVELLRDRLLGIGFKDQVAIL 488

Query: 521 VEKM 524
            +KM
Sbjct: 489 GDKM 492



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 148/319 (46%), Gaps = 4/319 (1%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI--VYTNLVRGWCRAGNISE 270
           G  P   ++ IV+ IL    + +    F   +++     +   ++ ++   + RA    +
Sbjct: 110 GFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQD 169

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A R F  M   GI+  V     ++  LC+   +  A   F ++  V   P+  T++ L R
Sbjct: 170 AIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV-FNPSVKTYSILTR 228

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
                  +    +V+++M+  GC  D + YN L++  CK GK ++A K+   M   G +P
Sbjct: 229 GWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDP 288

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +A T+++  R   +  D++  +R+  + K     PN  TYN +++     ++ +   ++ 
Sbjct: 289 DADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQIL 348

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            EM E  V P+  +Y  +   +C     N+A   ++ M  +KC+ P    Y MVL+ L R
Sbjct: 349 DEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCV-PDKHTYNMVLKLLVR 407

Query: 511 AGQLQKHEELVEKMVDRGF 529
            G+  +  E+ E M  RGF
Sbjct: 408 VGRFDRANEVWESMGKRGF 426


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 208/456 (45%), Gaps = 57/456 (12%)

Query: 120 CGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNV 179
           CGV       Q+L        R  FV     Y ++I    + ++ + ++     MK   V
Sbjct: 428 CGVGKFEKAFQILK----EMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGV 483

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
              V T++IL+  + +AGL  +A   F+ M   GC+P+ + ++ ++    + ++  +A  
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHD 543

Query: 240 FFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREM----------------KMAG 282
            F  + D    P+ + Y+ L+ G C+AG I +A  V+ ++                    
Sbjct: 544 IFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCT 603

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           I PNV TY  +ID LC+  +++ AH++   ML  GCEPN I ++ L+    K  + +   
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQ 663

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +V+ +M + G      TY  LID   KDG+L+ A+KVL+ M+   CNPN  T+  +   +
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL 723

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           SK+G++  A  +   M++  C PN VTY  L+     +   D  LKL K+M      PN 
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783

Query: 463 NTYRILITMYCGMGHWNNAYKYIREM--------------------------------IE 490
            TYR+LI   C  G  + A+  + EM                                +E
Sbjct: 784 VTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEME 843

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQK----HEELVE 522
                P + VY M++    +AG+L+     H+ELVE
Sbjct: 844 SHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 166/395 (42%), Gaps = 45/395 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K +QF      I++M +         F+ LV  Y  AG  A A   FNRM 
Sbjct: 309 YRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT 368

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
             G  P  +A++I I  +C +     A+            D++                 
Sbjct: 369 TCGSPPGYVAYNIFIGSICGQEELPNAELL----------DLV----------------- 401

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
            E+V+ EM  A    N    +     LC  G+  +A  +  EM+  G  P++ T+  ++ 
Sbjct: 402 -EKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVIT 460

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              +A + EK   ++ +MKR G   D  TY  LID  CK G +E A    + M   GC+P
Sbjct: 461 FLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSP 520

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N  T+  +     K   +  AH ++ +M D  C PN VTY+ L+     +       ++ 
Sbjct: 521 NVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVY 580

Query: 451 KEM-------------EENE---VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           +++             E N+   + PNV TY  LI   C     ++A++ +  M+   C 
Sbjct: 581 EKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGC- 639

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +P   VY+ ++    + G++   +E+  +M   G+
Sbjct: 640 EPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGY 674



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/468 (21%), Positives = 175/468 (37%), Gaps = 79/468 (16%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +  + H+   Y  +  + G       A   +  +   + E+     ++LVRR 
Sbjct: 120 FFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRC 179

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI-------------------------- 227
            R GL  EA+    R++++G  P  + ++ ++ +                          
Sbjct: 180 CRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDR 239

Query: 228 ---------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
                    LC+  R ++A +  +  K+ F  D ++ T ++ G   A   +EA      M
Sbjct: 240 STIGYFAQALCKVGRWADALNMLE--KEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +     PNV TY  ++    +  Q      +   M+  GC PN   FN+L+  +  A   
Sbjct: 298 RCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDY 357

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLID--------------------------------- 365
               +++N+M   G     + YN  I                                  
Sbjct: 358 AYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNK 417

Query: 366 --------CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
                   C C  GK E A ++L  M+RKG  P+ ST+  +   + +   V  +  ++ +
Sbjct: 418 VNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQE 477

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           MK     P+  TY IL+  F  +   +       EM      PNV TY  L+  Y     
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
              A+     M++  C  P +  Y  ++  L +AG++QK  E+ EK++
Sbjct: 538 LIQAHDIFHRMVDAACY-PNAVTYSALIDGLCKAGEIQKACEVYEKLI 584



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 132/310 (42%), Gaps = 41/310 (13%)

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           LVR  CR G   EA      +K  G +P+  TY+ ++  L   GQ+     V  EM   G
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 318 ---------------CEP-----------------NSITFNNLMRVHVKASRTEKVLQVY 345
                          C+                  +++    ++   ++AS   + +   
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFL 294

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M+   C  + +TY  L+    K  +     +++N M+ +GCNPN S FN +       
Sbjct: 295 HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNA 354

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILM------QMFATSKSTDMVLKLKKEMEENEVE 459
           GD   A++++ +M      P  V YNI +      +    ++  D+V K+ +EM      
Sbjct: 355 GDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCV 414

Query: 460 PN-VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            N VNT      + CG+G +  A++ ++EM+  K   P +S Y  V+  L +A +++K  
Sbjct: 415 LNKVNTANFSRCL-CGVGKFEKAFQILKEMM-RKGFVPDTSTYTKVITFLCQAKKVEKSF 472

Query: 519 ELVEKMVDRG 528
            L ++M   G
Sbjct: 473 LLFQEMKRAG 482



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 134/336 (39%), Gaps = 37/336 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K ++   A   +D M +   E     +  L+  + + G    A   F RM 
Sbjct: 611 YGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMT 670

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P    ++ +I  + +  R   A     + L D   P+V+ YT ++ G  + G I 
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIE 730

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +   M+  G  PNV TY+ +ID L + G+   +  +F +M   GC PN +T+  L+
Sbjct: 731 KALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLI 790

Query: 330 RVHVKASRTEKVLQVYNQMKR------------------------LGC-----EADTI-- 358
                A   ++   + ++MK                         LG        +T+  
Sbjct: 791 NHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPI 850

Query: 359 --TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL---GDVNGAHR 413
              Y  LID   K G+LE A+++   +V    + N ++  M    I  L     V  A  
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFT 910

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           +Y +M      P+ + +  L++        D  L+L
Sbjct: 911 LYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 8/264 (3%)

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           AER+ RE+     +      ++++   CR G    A +    + + G  P+++T+N L++
Sbjct: 153 AERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQ 212

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
           V   A + E   +V  +M   G   D  T  +     CK G+  DA   LN + ++  N 
Sbjct: 213 VLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA---LNMLEKEDFNL 269

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +      +   + +    N A     +M+   C PN VTY  L+  F   K      ++ 
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRII 329

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK-PGSSVYEMVLQQLR 509
             M      PN + +  L+  YC  G +  AYK    M    C   PG   Y + +  + 
Sbjct: 330 NMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT--TCGSPPGYVAYNIFIGSIC 387

Query: 510 RAGQLQKHE--ELVEKMVDRGFTA 531
              +L   E  +LVEK+ +    A
Sbjct: 388 GQEELPNAELLDLVEKVYEEMLAA 411


>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 188/384 (48%), Gaps = 5/384 (1%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           S+S S V  V++     R     +    FF W  A+  + HS + Y+ M+++ GK+++FD
Sbjct: 116 SVSESLVEQVLK-----RFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFD 170

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L W  ++ M      +++ T + ++RR  RA    +A+ AF  ME +G   D +A + ++
Sbjct: 171 LMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLM 230

Query: 226 SILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             L ++     A   F   KD    +   +  L+ GWC+A  +  A +   EMK  G  P
Sbjct: 231 DALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCP 290

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V +Y+ +++A CR     + + V  EM E GC PN +T+  +M    K     K L+VY
Sbjct: 291 DVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVY 350

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +MK   C  DT  Y+ LI    K G+L+DA  V   M ++G  P+  T+N +       
Sbjct: 351 EKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMH 410

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
                A ++  KM++  C+P+  TY+ L++M   +    ++  L   M +N++   V TY
Sbjct: 411 SQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTY 470

Query: 466 RILITMYCGMGHWNNAYKYIREMI 489
            +L+   C  G   +A  +  EM+
Sbjct: 471 SLLVHGLCKSGKLEHACLFFEEMV 494


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 183/352 (51%), Gaps = 7/352 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            F+  +    + G  + A+  +NRM E    PDK+ F+I+I+  C+     +A + F+ +
Sbjct: 534 AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 593

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K  +PDV+ +  L+ G C+AG +  A  +   M   G+ PNV TY+ ++  LC+ G+I
Sbjct: 594 VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 653

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A     EM+  GC P+SIT+ +L+    +ASRT+  LQ+ +++K  G + DT+TYN L
Sbjct: 654 EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 713

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK- 422
           +D   K G+ E AI VL  MV KG +P+  T+N +   + K GD+  A R++G M     
Sbjct: 714 VDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVS 773

Query: 423 --CEPNTVTYNILMQMFATSKSTDMVLKLKKEM--EENEVEPNVNTYRILITMYCGMGHW 478
             C PN VTY++L+         D   +L +EM  +  +V PN+ TY   +   C     
Sbjct: 774 RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMM 833

Query: 479 NNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             A + +R + +    + P +  +  ++  L + GQ  +   + + M+  G+
Sbjct: 834 AEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGY 885



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 8/392 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +++   K  + D A   +  M SR     V TF+ ++    ++  + EA  
Sbjct: 427 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQ 486

Query: 205 AFNRME-EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
            F+ M  ++G  PDKI +  +I  L R  RA +A++  D++ D   PD   +   + G  
Sbjct: 487 MFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD---PDTYAFNCCINGLS 543

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G++S A +V+  M    + P+  T++I+I   C+ G   +A  +F EM+    +P+ +
Sbjct: 544 KLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 603

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TF  L+    KA + E    + + M  LG   + +TYN L+   CK G++E+A + L  M
Sbjct: 604 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 663

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V  GC P++ T+  +   + +    + A ++  ++K    +P+TVTYNIL+     S  T
Sbjct: 664 VSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQT 723

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE--EKCLKPGSSVY 501
           +  + + +EM      P+V TY  LI   C  G    A +   +M     +C  P    Y
Sbjct: 724 EQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTY 783

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            +++  L + G++ +  EL+++M+ +     P
Sbjct: 784 SVLINGLCKVGRIDEARELIQEMMRKSCDVLP 815



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 200/436 (45%), Gaps = 46/436 (10%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR---------------- 177
           F++W  A P F H+   +++ +NL  K      A   IDL +SR                
Sbjct: 97  FYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKA---IDLFRSRLPPRCRPNHFTYSTLL 153

Query: 178 --------NVEIT-------------VDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCA 215
                   +VE T             V  ++I+++   RAG  A A+  F   M   G A
Sbjct: 154 RATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVA 213

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
           P  + ++ +I+ LC+          F+ L ++   PDV+ Y  L+   C+AG++ EA R+
Sbjct: 214 PTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 273

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE--PNSITFNNLMRVH 332
             +M      PNV TYS++I+ LC+ G+I  A ++  EM    C+  PN IT+N+ +   
Sbjct: 274 HGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 333

Query: 333 VKASRTEKVLQVYNQMK--RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            K S T +  ++   ++   L    DT+T++ LID  CK G++++A  V + M+  G  P
Sbjct: 334 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 393

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N  T+N +   + K   +  AH M   M D    P+ +TY++L+  F  +   D  L+L 
Sbjct: 394 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 453

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
             M      PNV T+  +I   C       A++   +M  +  L P    Y  ++  L R
Sbjct: 454 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFR 513

Query: 511 AGQLQKHEELVEKMVD 526
            G+  + E L++ M D
Sbjct: 514 TGRAGQAEALLDAMPD 529



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 186/424 (43%), Gaps = 45/424 (10%)

Query: 148  PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            PD+  +  +I+   K  Q + A   +DLM +  V   V T++ LV    ++G   EA   
Sbjct: 600  PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659

Query: 206  FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD------------------- 246
               M   GC PD I +  ++  LCR  R  +A      LK                    
Sbjct: 660  LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 719

Query: 247  -----------------KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ---PN 286
                                PDV+ Y  L+   C+AG++ EA R+  +M     +   PN
Sbjct: 720  SGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPN 779

Query: 287  VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE--PNSITFNNLMRVHVKASRTEKVLQV 344
            V TYS++I+ LC+ G+I  A ++  EM+   C+  PN IT+N+ +    K S   +  ++
Sbjct: 780  VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL 839

Query: 345  YNQMK--RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
               ++   L    DT+T++ LID  CK G+ ++A  V + M+  G  PN  T+N++   +
Sbjct: 840  MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGL 899

Query: 403  SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
             K   +  AH M   M D    P+ +TY++L+  F  +   D  L+L   M      PNV
Sbjct: 900  CKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNV 959

Query: 463  NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
             T+  +I   C       A++   +M  +  L P    Y  ++  L R G   + E L++
Sbjct: 960  VTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLD 1019

Query: 523  KMVD 526
             M D
Sbjct: 1020 AMPD 1023



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 192/436 (44%), Gaps = 38/436 (8%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L  F    AR     +   Y+ +IN   K  +        + +  R     V T++ L
Sbjct: 198 RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTL 257

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-- 247
           +    +AG   EA      M    C P+ + +S++I+ LC+  R  EA+     +  K  
Sbjct: 258 IDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 317

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG--IQPNVYTYSIVIDALCRCGQIT 304
              P++I Y + + G C+    +EA  + R ++     + P+  T+S +ID LC+CGQI 
Sbjct: 318 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQID 377

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  VF +M+  G  PN IT+N L+    KA + E+   +   M   G   D ITY+ L+
Sbjct: 378 EACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 437

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK----- 419
           D  CK  ++++A+++L+ M  +GC PN  TFN I   + K      A +M+  M      
Sbjct: 438 DAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGL 497

Query: 420 ---------------------------DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
                                      D   +P+T  +N  +   +        L++   
Sbjct: 498 VPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNR 557

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M E E+ P+  T+ ILI   C  G++  A     EM+  K L+P    +  ++  L +AG
Sbjct: 558 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV-AKNLQPDVMTFGALIDGLCKAG 616

Query: 513 QLQKHEELVEKMVDRG 528
           Q++   ++++ M + G
Sbjct: 617 QVEAARDILDLMGNLG 632



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 190/396 (47%), Gaps = 9/396 (2%)

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           E V     ++ +I  A K   F+ A    + M ++N++  V TF  L+    +AG    A
Sbjct: 562 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 621

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
               + M   G  P+ + ++ ++  LC+  R  EA  F + +      PD I Y +LV  
Sbjct: 622 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 681

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            CRA    +A ++  E+K  G  P+  TY+I++D L + GQ  +A  V  EM+  G  P+
Sbjct: 682 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQM-KRLG--CEADTITYNFLIDCHCKDGKLEDAIK 378
            +T+N L+    KA   E+  +++  M  R+   C  + +TY+ LI+  CK G++++A +
Sbjct: 742 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARE 801

Query: 379 VLNSMVRKGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKMKD--LKCEPNTVTYNILM 434
           ++  M+RK C+  PN  T+N     + K   +  A  +   ++D  L+  P+TVT++ L+
Sbjct: 802 LIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLI 861

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                   TD    +  +M      PNV TY +L+   C       A+  I  M+ +K +
Sbjct: 862 DGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV-DKGV 920

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            P    Y +++    +A  + +  EL+  M  RG T
Sbjct: 921 TPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 205/449 (45%), Gaps = 49/449 (10%)

Query: 106  SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
            SI+  ++ + + ++      + L+  L  F W    P+ V     Y+ +++   K  Q +
Sbjct: 672  SITYGSLVYALCRASRTDDALQLVSELKSFGW---DPDTVT----YNILVDGLWKSGQTE 724

Query: 166  LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY---GCAPDKIAFS 222
             A   ++ M  +     V T++ L+    +AG   EA      M       C P+ + +S
Sbjct: 725  QAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYS 784

Query: 223  IVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
            ++I+ LC+  R  EA+     +  K     P++I Y + + G C+   ++EA  + R ++
Sbjct: 785  VLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844

Query: 280  MAG--IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
                 + P+  T+S +ID LC+CGQ   A +VF +M+  G  PN +T+N LM    K  +
Sbjct: 845  DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDK 904

Query: 338  TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             E+   +   M   G   D ITY+ L+D  CK   +++A+++L+ M  +GC PN  TFN 
Sbjct: 905  MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964

Query: 398  IFRCISKLGDVNGAHRMYGKMKDLK--CEPNTVTYNILMQ-MFAT--------------- 439
            I   + K      A +M+  M  LK    P+ +TY  L+  +F T               
Sbjct: 965  IIDGLCKSDQSGEAFQMFDDMT-LKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD 1023

Query: 440  -------------SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
                         SK  D+   L + M E E+ P+  T+ ILI   C  G++  A     
Sbjct: 1024 PDTYAFNCCINGLSKLGDVSRALHR-MLELELVPDKVTFNILIAGACKAGNFEQASALFE 1082

Query: 487  EMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
            EM+  K L+P    +  ++  L +AGQ++
Sbjct: 1083 EMV-AKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 43/315 (13%)

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS----------------------- 291
           Y NL+    ++G+ ++A  +FR       +PN +TYS                       
Sbjct: 117 YLNLL---VKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRI 173

Query: 292 -----------IVIDALCRCGQITRAHDVF-AEMLEVGCEPNSITFNNLMRVHVKASRTE 339
                      IV+ +LCR G+  RA ++F  EM   G  P  +T+N ++    K++   
Sbjct: 174 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 233

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
             ++++ ++   G   D +TYN LID  CK G LE+A ++   M  + C PN  T++++ 
Sbjct: 234 AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCE--PNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
             + K+G ++ A  +  +M    C+  PN +TYN  +        T    +L + + +  
Sbjct: 294 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 353

Query: 458 --VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             V P+  T+  LI   C  G  + A     +MI    + P    Y  ++  L +A +++
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV-PNVITYNALVNGLCKADKME 412

Query: 516 KHEELVEKMVDRGFT 530
           +   ++E MVD+G T
Sbjct: 413 RAHAMIESMVDKGVT 427



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 125/288 (43%), Gaps = 38/288 (13%)

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK----- 334
           + G +  +++++  ++ L + G   +A D+F   L   C PN  T++ L+R   K     
Sbjct: 104 LPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDV 163

Query: 335 -----------------------------ASRTEKVLQVY-NQMKRLGCEADTITYNFLI 364
                                        A  T + L+++  +M R G     +TYN +I
Sbjct: 164 ERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII 223

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           +  CK  +L   +++   +V +G +P+  T+N +   + K GD+  A R++G M    C 
Sbjct: 224 NGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCV 283

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEEN--EVEPNVNTYRILITMYCGMGHWNNAY 482
           PN VTY++L+         D   +L +EM     +V PN+ TY   +   C       A 
Sbjct: 284 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEAC 343

Query: 483 KYIREMIEEKC-LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + +R + +    + P +  +  ++  L + GQ+ +   + + M+  G+
Sbjct: 344 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY 391



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 32/196 (16%)

Query: 147  SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            +PD+  Y  +++   K    D A   +  M SR     V TF+ ++    ++  + EA  
Sbjct: 921  TPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQ 980

Query: 205  AFNRME-EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD----------------- 246
             F+ M  ++G APDKI +  +I  L R   A +A+   D++ D                 
Sbjct: 981  MFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLG 1040

Query: 247  ------------KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                        +  PD + +  L+ G C+AGN  +A  +F EM    +QP+V T+  +I
Sbjct: 1041 DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 1100

Query: 295  DALCRCGQITRAHDVF 310
            D LC+ GQ+    D+ 
Sbjct: 1101 DGLCKAGQVEATWDIM 1116


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 200/385 (51%), Gaps = 4/385 (1%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y    +I    KVR+FD A   +  M+ R   +   T+++L+    R+G   EA  
Sbjct: 241 SPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG 300

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
               ME+YG  PD   +  +I+ LC+ RR++EA++  D +   + +P+V+VY NL+ G+ 
Sbjct: 301 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFM 360

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R GN  EA ++ +EM  AG+QPN  TY  ++  LC+ GQ+ RA  +  +M+     P++I
Sbjct: 361 REGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI 420

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N ++  H +    +   ++ ++M+  G   +  TY+ +I   C+ G+ E A  +L  M
Sbjct: 421 TYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 480

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  PNA  +  +     + G+V+ A  ++ KM  +   P+   YN L+   +     
Sbjct: 481 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 540

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +   K   +M+E  + PN  TY  LI  Y   G   +A + ++ M++   LKP   +Y  
Sbjct: 541 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG-LKPNDVIYID 599

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           +L+   ++  ++K     + M+D+G
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQG 624



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 175/365 (47%), Gaps = 2/365 (0%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L W   + M    +   V T+S L+  Y +      A      M E GC  + + ++++I
Sbjct: 227 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 286

Query: 226 SILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           + LCR     EA  F   ++D    PD   Y  L+ G C++   +EA+ +  EM  A ++
Sbjct: 287 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV  Y+ +ID   R G    A  +  EM+  G +PN IT++NL+R   K  + ++   +
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             QM R     DTITYN +I+ H +    +DA ++L+ M   G +PN  T++++   + +
Sbjct: 407 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G+   A  +  +M     +PN   Y  L+  +    +  +  ++  +M +  V P++  
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 526

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI     +G    + KY  +M +E+ L P    Y  ++    + G L+  E+LV++M
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQM-QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585

Query: 525 VDRGF 529
           +D G 
Sbjct: 586 LDTGL 590



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 172/386 (44%), Gaps = 4/386 (1%)

Query: 146 HSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD     + + G  R      A+  +  M++  +   V T+SI++    ++G   +A 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
                M   G  P+   ++ +IS  CR+   S A   FD + K    PD+  Y +L+ G 
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G + E+ + F +M+  G+ PN +TYS +I    + G +  A  +   ML+ G +PN 
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 594

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + + +L+  + K+   EKV   +  M   G   D   Y  LI      G +E A +VL+ 
Sbjct: 595 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 654

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           + + G  P+   ++ +   + K  D   A  +  +M     +PN V YN L+     S  
Sbjct: 655 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 714

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                 +   +    + PN  TY  LI   C +G  +NA+    EM+    + P + VY 
Sbjct: 715 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG-ITPDAFVYS 773

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++      AG L++   L+E+M  RG
Sbjct: 774 VLTTGCSSAGDLEQAMFLIEEMFLRG 799



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 161/345 (46%), Gaps = 10/345 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
              +LV  Y ++G   +A      M + G AP     + ++  L R    ++A +    +
Sbjct: 176 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLR----ADAMALLWKV 231

Query: 245 KD-----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           ++        PDV  Y+ L+  +C+      A++V  EM+  G   N  TY+++I  LCR
Sbjct: 232 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G +  A     +M + G  P+  T+  L+    K+ R+ +   + ++M     + + + 
Sbjct: 292 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 351

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y  LID   ++G  ++A K++  MV  G  PN  T++ + R + K+G ++ A  +  +M 
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
                P+T+TYN++++      S     +L  EME   + PNV TY I+I   C  G   
Sbjct: 412 RDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 471

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            A   + EM   K LKP + VY  ++    R G +    E+ +KM
Sbjct: 472 KASDLLEEMT-TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/454 (22%), Positives = 185/454 (40%), Gaps = 90/454 (19%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDLY  + +I    KV + + +  +   M+ R +     T+S L+  Y++ G    A   
Sbjct: 522 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 581

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------ 247
             RM + G  P+ + +  ++    +     +  S F S+ D+                  
Sbjct: 582 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSS 641

Query: 248 -------FE-----------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                  F            PDV VY++L+ G C+  +  +A  +  EM   G+ PN+  
Sbjct: 642 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 701

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +ID LC+ G I+ A +VF  +L  G  PN +T+ +L+    K         +YN+M 
Sbjct: 702 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 761

Query: 350 RLGCEADTITY----------------------------------NFLIDCHCKDGKLED 375
             G   D   Y                                  N L+D  CK GK+++
Sbjct: 762 ATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQE 821

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            +K+L+ ++ +G  PNA T   I   +S+ G ++  H ++ +++    E     ++ L  
Sbjct: 822 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 881

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                   DM+         N+ +  ++    +I  +C  G+ + A   +R++I  K   
Sbjct: 882 --------DMI---------NQGKIPLDVVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAP 923

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G S Y  ++  L R G+L +   L+++M  RG 
Sbjct: 924 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGI 957



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 164/379 (43%), Gaps = 55/379 (14%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  + V +    + IL+     +G    A    + +E+ G  PD   +S +IS LC+   
Sbjct: 620 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 679

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A    D +  K  +P+++ Y  L+ G C++G+IS A  VF  +   G+ PN  TY+ 
Sbjct: 680 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 739

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID  C+ G I+ A  ++ EML  G  P++  ++ L      A   E+ + +  +M   G
Sbjct: 740 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
             A   ++N L+D  CK GK+++ +K+L+ ++ +G  PNA T   I   +S+ G ++  H
Sbjct: 800 -HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 858

Query: 413 RMY-------------------------GKM-----KDL---KCEPNTVTYNILMQMFAT 439
            ++                         GK+      D+    C+   +   ++++    
Sbjct: 859 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIV 918

Query: 440 SKSTDM--------------------VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +KS  M                     L L KEM++  + P+ N   IL+T     G+  
Sbjct: 919 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQ 978

Query: 480 NAYKYIREMIEEKCLKPGS 498
                +  M+  K L+  S
Sbjct: 979 EHNTVLDNMLCHKWLQKDS 997



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 151/370 (40%), Gaps = 41/370 (11%)

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-----QSFFDSLKDKFEPDVI 253
           +A A  AF  +    CA     F++   +L +  RA  +      S   +L D       
Sbjct: 118 SAPAPDAFAHLAMSLCAGS--LFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPA 175

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           V   LV  + ++G + +A  V   M+  G+ P++   + ++  L R   +     V   M
Sbjct: 176 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFM 235

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           +  G  P+  T++ L+  + K    +   +V  +M+  GC  +T+TYN LI   C+ G +
Sbjct: 236 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 295

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           E+A      M   G  P+  T+  +   + K    N A  +  +M   + +PN V Y  L
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI---- 489
           +  F    + D   K+ KEM    V+PN  TY  L+   C MG  + A   +++M+    
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415

Query: 490 ------------------------------EEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
                                         E   + P    Y +++  L ++G+ +K  +
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 520 LVEKMVDRGF 529
           L+E+M  +G 
Sbjct: 476 LLEEMTTKGL 485


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 194/379 (51%), Gaps = 2/379 (0%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +I+   ++ +   A H + LM+ +     V ++S +V  Y R G   +       M+
Sbjct: 692  YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              G  P+   +  +I +LCR  + +EA+ +F + ++    PD +VYT L+ G+C+ G+I 
Sbjct: 752  RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             A + F EM    I P+V TY+ +I   C+ G +  A  +F EM   G EP+S+TF  L+
Sbjct: 812  AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871

Query: 330  RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              + KA   +   +V+N M + GC  + +TY  LID  CK+G L+ A ++L+ M + G  
Sbjct: 872  NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931

Query: 390  PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            PN  T+N I   + K G++  A ++ G+ +      +TVTY  LM  +  S   D   ++
Sbjct: 932  PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991

Query: 450  KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             KEM    ++P + T+ +L+  +C  G   +  K +  M+  K + P ++ +  +++Q  
Sbjct: 992  LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYC 1050

Query: 510  RAGQLQKHEELVEKMVDRG 528
                L+    + + M  RG
Sbjct: 1051 IRNNLKAATAIYKDMCSRG 1069



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 195/424 (45%), Gaps = 39/424 (9%)

Query: 146  HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            ++PD+  Y  ++N   +  + D  W  I++MK + ++     +  ++    R    AEA 
Sbjct: 720  YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779

Query: 204  HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---------------- 247
             AF+ M   G  PD + ++ +I   C++     A  FF  +  +                
Sbjct: 780  EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839

Query: 248  --------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
                                 EPD + +T L+ G+C+AG++ +A RV   M  AG  PNV
Sbjct: 840  CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 899

Query: 288  YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             TY+ +ID LC+ G +  A+++  EM ++G +PN  T+N+++    K+   E+ +++  +
Sbjct: 900  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959

Query: 348  MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
             +  G  ADT+TY  L+D +CK G+++ A ++L  M+ KG  P   TFN++       G 
Sbjct: 960  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019

Query: 408  VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            +    ++   M      PN  T+N L++ +    +      + K+M    V P+  TY  
Sbjct: 1020 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 1079

Query: 468  LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            L+  +C   +   A+   +EM + K      S Y ++++   +  +  +  E+ ++M   
Sbjct: 1080 LVKGHCKARNMKEAWFLFQEM-KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138

Query: 528  GFTA 531
            G  A
Sbjct: 1139 GLAA 1142



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/455 (22%), Positives = 188/455 (41%), Gaps = 57/455 (12%)

Query: 131  VLSFFNWVTARPE------------FVHSPDLYHEMINLAG-----KVRQFDLAWHFIDL 173
            VL FF+W  +R +             V S DL      ++      K+   D    F DL
Sbjct: 547  VLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 606

Query: 174  MKSRNVEITVD--TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
            +     +   D   F +  +  V  GL  EA   F +M  YG      + ++ ++ L + 
Sbjct: 607  LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 666

Query: 232  --RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
              + A+    F +  +     +V  Y  ++   C+ G I EA  +   M++ G  P+V +
Sbjct: 667  CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 726

Query: 290  YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
            YS V++  CR G++ +   +   M   G +PNS  + +++ +  +  +  +  + +++M 
Sbjct: 727  YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 786

Query: 350  RLGCEADTITYNFLIDCHCKDGKLE----------------------------------- 374
            R G   DT+ Y  LID  CK G +                                    
Sbjct: 787  RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 846

Query: 375  DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            +A K+ + M  KG  P++ TF  +     K G +  A R++  M    C PN VTY  L+
Sbjct: 847  EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 906

Query: 435  QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                     D   +L  EM +  ++PN+ TY  ++   C  G+   A K + E  E   L
Sbjct: 907  DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGL 965

Query: 495  KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               +  Y  ++    ++G++ K +E++++M+ +G 
Sbjct: 966  NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 1000



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 3/254 (1%)

Query: 147  SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            SP++  Y  +I+   K    D A   +  M    ++  + T++ +V    ++G   EAV 
Sbjct: 896  SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955

Query: 205  AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
                 E  G   D + ++ ++   C+     +AQ     +  K  +P ++ +  L+ G+C
Sbjct: 956  LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 1015

Query: 264  RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
              G + + E++   M   GI PN  T++ ++   C    +  A  ++ +M   G  P+  
Sbjct: 1016 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075

Query: 324  TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            T+ NL++ H KA   ++   ++ +MK  G      TY+ LI    K  K  +A +V + M
Sbjct: 1076 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135

Query: 384  VRKGCNPNASTFNM 397
             R+G   +   F+ 
Sbjct: 1136 RREGLAADKEIFDF 1149



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y  +++   K  + D A   +  M  + ++ T+ TF++L+  +   G+  +     N M 
Sbjct: 972  YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              G AP+   F+ ++   C +     A + + D       PD   Y NLV+G C+A N+ 
Sbjct: 1032 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 1091

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            EA  +F+EMK  G   +V TYS++I    +  +   A +VF +M   G   +   F+   
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 1151

Query: 330  RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
                K  R + ++             D I  N+L+D
Sbjct: 1152 DTKYKGKRPDTIVD----------PIDEIIENYLVD 1177


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 192/372 (51%), Gaps = 5/372 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+++   A    + M  R  E  V +++ ++    + G  + AV  F +ME+ GC P+ 
Sbjct: 177 GKIKE---AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNV 233

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + +S +I  LC+ R  ++A  F   + ++   P+V  Y ++V G+C  G ++EA R+F+E
Sbjct: 234 VTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKE 293

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    + PN  T++I++D LC+ G ++ A  VF  M E G EP+  T+N LM  +     
Sbjct: 294 MVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRL 353

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             +  +V+  M R GC     +YN LI+ +CK  ++++A  +L  M  K  NP+  T++ 
Sbjct: 354 MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYST 413

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           + + + +LG    A  ++ +M      PN VTY IL+  F      D  LKL K M+E +
Sbjct: 414 LMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK 473

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +EPN+  Y ILI      G    A +   ++  +   +P    Y ++++ L + G   + 
Sbjct: 474 LEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGT-RPDIRTYTVMIKGLLKEGLSDEA 532

Query: 518 EELVEKMVDRGF 529
            +L  KM D GF
Sbjct: 533 YDLFRKMEDDGF 544



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 201/439 (45%), Gaps = 45/439 (10%)

Query: 133 SFFNWV--TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           SF+  V    RP  V     + + +    K +Q+       + M    V   V + +IL+
Sbjct: 80  SFYRMVRINPRPSVVE----FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFE 249
               R      +V    +M + G  PD I F+ +I+ LC + +  EA   F+ + K   E
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR---------- 299
           P+VI YT ++ G C+ GN S A  VF++M+  G +PNV TYS +ID+LC+          
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255

Query: 300 -------------------------CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
                                     GQ+  A  +F EM+     PN++TF  L+    K
Sbjct: 256 LSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK 315

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
                +   V+  M   G E D  TYN L+D +C    + +A KV   M+RKGC P A +
Sbjct: 316 EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N++     K   ++ A  +  +M      P+TVTY+ LMQ           L L KEM 
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMC 435

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
                PN+ TY IL+  +C  GH + A K ++ M E+K L+P    Y ++++ +  AG+L
Sbjct: 436 SYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK-LEPNIVHYTILIEGMFIAGKL 494

Query: 515 QKHEELVEKMVDRGFTARP 533
           +  +EL  K+   G   RP
Sbjct: 495 EVAKELFSKLFGDG--TRP 511



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 175/357 (49%), Gaps = 36/357 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K R  + A  F+  M  R +   V T++ +V  +   G   EA   F  M 
Sbjct: 236 YSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV 295

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
                P+ + F+I++  LC++   SEA+  F+++ +K  EPD+  Y  L+ G+C    ++
Sbjct: 296 GRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMN 355

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA++VF  M   G  P  ++Y+I+I+  C+  ++  A  + AEM      P+++T++ LM
Sbjct: 356 EAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 415

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--- 386
           +   +  R ++ L ++ +M   G   + +TY  L+D  CK G L++A+K+L SM  K   
Sbjct: 416 QGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLE 475

Query: 387 --------------------------------GCNPNASTFNMIFRCISKLGDVNGAHRM 414
                                           G  P+  T+ ++ + + K G  + A+ +
Sbjct: 476 PNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDL 535

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           + KM+D    PN+ +YN+++Q F  ++ +   ++L  EM       N++T+++L+ +
Sbjct: 536 FRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDL 592



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 114/221 (51%), Gaps = 1/221 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K R+ D A   +  M  + +     T+S L++   + G   EA++ F  M 
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMC 435

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
            YG  P+ + + I++   C+     EA     S+K+K  EP+++ YT L+ G   AG + 
Sbjct: 436 SYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLE 495

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A+ +F ++   G +P++ TY+++I  L + G    A+D+F +M + G  PNS ++N ++
Sbjct: 496 VAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMI 555

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           +  ++   +   +++ ++M       +  T+  L+D   +D
Sbjct: 556 QGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQD 596


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 190/379 (50%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +IN  GKV +F  A    D M +R  +    T++ ++    + G  A A   F +ME
Sbjct: 48  FTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKME 107

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC  + + +S +I  LC+ RR +EA   F  +K K   P +  YT+L++G C      
Sbjct: 108 EAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWK 167

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  EM    I PNV T+++++D  C+ G++  A  V   M E+G EP+ +T+N+LM
Sbjct: 168 EASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM 227

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             +   +   +  ++++ M   GC+ D  +Y+ LI+ +CK  ++++A ++ N M+ +G  
Sbjct: 228 YGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGST 287

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  ++N +   + +LG +  A  ++  M      PN  TY IL+  F          +L
Sbjct: 288 PNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRL 347

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M+   ++PN+  Y IL+   C  G+  +A +   E+     L+P   +Y  ++  L 
Sbjct: 348 FRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG-LQPNVQIYTTIINGLC 406

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G L +  E    M D G
Sbjct: 407 KEGLLDEALEAFRNMEDDG 425



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 155/321 (48%), Gaps = 2/321 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGN 267
           ME  G +P+    +I+I+  C+ +R     S     +K   +P ++ +T L+ G  + G 
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            ++A  +F +M   G QP+ YTY+ +I+ LC+ G+   A  +F +M E GC+ N +T++ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K  R  + L +++ MK         TY  LI   C   + ++A  +LN M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN  TFN++     K G V  A  +   M ++  EP+ VTYN LM  ++         
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           KL   M     +P+V +Y ILI  YC     + A +   EMI +    P +  Y  ++  
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS-TPNNVSYNTLIHG 299

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
           L + G+L++ ++L + M   G
Sbjct: 300 LCQLGRLREAQDLFKNMHTNG 320



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 120/229 (52%), Gaps = 1/229 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D+M ++  +  V ++SIL+  Y +A    EA   FN M   G  P+ ++++ +I 
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 227 ILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC+  R  EAQ  F ++      P++  Y  L+ G+C+ G + +A R+FR M+   ++P
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N+  Y+I+++A+C+ G +  A ++F+E+  +G +PN   +  ++    K    ++ L+ +
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             M+  GC  D  +YN +I    +      A+ ++  M  +G   +A T
Sbjct: 419 RNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +IN   K  +F  A    D M +R  +  V T++ ++    + G  A A     +M 
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMG 223

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC PD + +S +I  LC+ R  +EA   F  +K K   P V+ YT+L++G C      
Sbjct: 224 EVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWK 283

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  EM    I P++ T+S++ID  C+ G +  A  V   M E+G EPN IT+N+LM
Sbjct: 284 EASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM 343

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             +       +  ++++ M   GC+ D  +Y+ LI+ +C   ++++A ++ N M+ +G  
Sbjct: 344 HGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLT 403

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  ++  +     +LG +  A  ++  M      P+  TY++L++ F          +L
Sbjct: 404 PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M+   ++PN+  Y ILI   C  G+ N+A K   E+     L+P   +Y  ++  L 
Sbjct: 464 FRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG-LQPDVQIYTTIINGLC 522

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G L +  E   KM + G
Sbjct: 523 KEGLLDEALEAFRKMEEDG 541



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 183/380 (48%), Gaps = 3/380 (0%)

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR-ME 210
           H+  + +   R  D A    + M  R     +  F+ L+   VR     +AV + ++ ME
Sbjct: 59  HKNDDASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQME 118

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P+    +I+I+  C  +      S     +K   +P +I +T L+ G C+AG  +
Sbjct: 119 LAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFA 178

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F +M   G QP+VYTY+ +I+ LC+ G+   A  +  +M EVGC+P+ +T++ L+
Sbjct: 179 QALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLI 238

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K     + L +++ MK  G     ++Y  LI   C   + ++A  +LN M      
Sbjct: 239 DSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIM 298

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  TF+++     K G+V  A  +   M ++  EPN +TYN LM  ++         KL
Sbjct: 299 PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKL 358

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M     +P+V +Y ILI  YC +   + A +   EMI +  L P +  Y  ++    
Sbjct: 359 FDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG-LTPNTVSYTTLIHAFC 417

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           + G+L++  EL + M   G+
Sbjct: 418 QLGKLREARELFKDMHTNGY 437



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 114/212 (53%), Gaps = 3/212 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +IN    V++ D A    + M  + +     +++ L+  + + G   EA   
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCR 264
           F  M   G  PD   +S+++   C++    +A   F +++  + +P++++YT L+   C+
Sbjct: 429 FKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCK 488

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +GN++ A ++F E+ + G+QP+V  Y+ +I+ LC+ G +  A + F +M E GC PN  +
Sbjct: 489 SGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFS 548

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           +N ++R  ++     + +Q+  +M+  G  AD
Sbjct: 549 YNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 198/423 (46%), Gaps = 38/423 (8%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD +     +AG  K  + D+A    +   + +    V  +S L+    +AG   EA   
Sbjct: 264 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKL 323

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F +M E  C PD + F+ ++  LC+  R  EAQ   ++++D+   P+VI Y++L+ G C+
Sbjct: 324 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 383

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +A+ VF+ M + GI+PNV TY+ +I   C    +  A  +  EM   GC P+ IT
Sbjct: 384 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 443

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI-------------------- 364
           +N L+    K  R  +  +++  MK   C  D ITY+ LI                    
Sbjct: 444 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 503

Query: 365 ---------------DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
                          + +C  G ++DA ++L  MV   C+P+  T+  +     K+G + 
Sbjct: 504 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 563

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A R+  +M    C+PN VTY  L+  F  +    +  +L +EM  N V+PNV TYR LI
Sbjct: 564 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLI 623

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +CG G    A K +  +  ++  K     Y +++  L R G++    EL+E +   G 
Sbjct: 624 GGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGT 683

Query: 530 TAR 532
             R
Sbjct: 684 PPR 686



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 204/399 (51%), Gaps = 3/399 (0%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF+W + +  F H+   Y+ +     + R+ D   H +       +   V T+++++
Sbjct: 7   ALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVI 66

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           +   ++G   +A      M E G  PD   ++ VI  LC+ R  ++A  +F S+  + E 
Sbjct: 67  QGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM--ECEK 124

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +VI +T ++ G C+A  + EA   F +MK  G  PN +TY+++I+  C+  ++ RA+ + 
Sbjct: 125 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 184

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM E G  PN +T++ ++    + ++ +   +++ QM   GC  + +TYN L+   C++
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 244

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G +++A ++L+ M  +G  P+  +++ +   + K G ++ A +++    +  C P+ V Y
Sbjct: 245 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 304

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           + L+     +   D   KL ++M EN  EP+V T+  L+   C       A + +  M +
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             C  P    Y  ++  L + GQ++  +E+ ++M+ RG 
Sbjct: 365 RNC-TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 402



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 188/379 (49%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   +  + D A+     M        + T++ L+    R GL  EA    + M 
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PDK ++  +++ LC+  +   A   F D+      PDV+ Y+ L+ G C+AG + 
Sbjct: 259 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLD 318

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++F +M+    +P+V T++ ++D LC+  ++  A  V   M +  C PN IT+++L+
Sbjct: 319 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 378

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  +     +V+ +M   G E + +TYN LI   C    ++ A+ ++  M   GC 
Sbjct: 379 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 438

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N +   + K G    A+R++G MK   C P+ +TY+ L+  F   +  DM   L
Sbjct: 439 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 498

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M +  V P+V T+  L+  YC  G  ++A + + EM+   C  P    Y  ++    
Sbjct: 499 FDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC-SPDVYTYTSLVDGFC 557

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G++ +   ++++M  RG
Sbjct: 558 KVGRMVEARRVLKRMAKRG 576



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 2/377 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  Q   A      M  R +E  V T++ L+  +        A+     M 
Sbjct: 374 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 433

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
             GC PD I ++ +I  LC+  RA EA   F  +K KF  PDVI Y+ L+ G+C+   I 
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 493

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F +M    + P+V T+S +++  C  G +  A  +  EM+   C P+  T+ +L+
Sbjct: 494 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 553

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R  +  +V  +M + GC+ + +TY  LID  C+ GK   A ++L  MV  G  
Sbjct: 554 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQ 613

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           PN  T+  +       GD+  A ++  ++ +D  C+ +   Y ++M     +      L+
Sbjct: 614 PNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALE 673

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L + ++++   P  + Y  LI   C       A + + EM   +  +P +  YE V+Q+L
Sbjct: 674 LLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQEL 733

Query: 509 RRAGQLQKHEELVEKMV 525
            R G+ ++   L ++++
Sbjct: 734 AREGRHEEANALADELL 750



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 183/380 (48%), Gaps = 7/380 (1%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y+ +I+   K R    A   +D  +S   E  V T++I++    +A    EA   
Sbjct: 92  PDAAIYNFVIHALCKARNTAKA---LDYFRSMECEKNVITWTIMIDGLCKANRLPEATTY 148

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F +M++ G  P++  ++++I+  C+  +   A      +K+    P+V+ Y+ ++ G+CR
Sbjct: 149 FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCR 208

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +  A ++FR+M   G  PN+ TY+ ++  LCR G +  A+++  EM E G +P+  +
Sbjct: 209 QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 268

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ LM    K  + +  L+V+       C  D + Y+ LI   CK G+L++A K+   M 
Sbjct: 269 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR 328

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
              C P+  TF  +   + K   +  A ++   M+D  C PN +TY+ L+     +    
Sbjct: 329 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              ++ K M    +EPNV TY  LI  +C     ++A   + EM    CL P    Y  +
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL-PDIITYNTL 447

Query: 505 LQQLRRAGQLQKHEELVEKM 524
           +  L + G+  +   L   M
Sbjct: 448 IDGLCKTGRAPEANRLFGDM 467


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 200/385 (51%), Gaps = 4/385 (1%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y    +I    KVR+FD A   +  M+ R   +   T+++L+    R+G   EA  
Sbjct: 114 SPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG 173

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
               ME+YG  PD   +  +I+ LC+ RR++EA++  D +   + +P+V+VY NL+ G+ 
Sbjct: 174 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFM 233

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R GN  EA ++ +EM  AG+QPN  TY  ++  LC+ GQ+ RA  +  +M+     P++I
Sbjct: 234 REGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI 293

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N ++  H +    +   ++ ++M+  G   +  TY+ +I   C+ G+ E A  +L  M
Sbjct: 294 TYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 353

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  PNA  +  +     + G+V+ A  ++ KM  +   P+   YN L+   +     
Sbjct: 354 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 413

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +   K   +M+E  + PN  TY  LI  Y   G   +A + ++ M++   LKP   +Y  
Sbjct: 414 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG-LKPNDVIYID 472

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           +L+   ++  ++K     + M+D+G
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQG 497



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 175/365 (47%), Gaps = 2/365 (0%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L W   + M    +   V T+S L+  Y +      A      M E GC  + + ++++I
Sbjct: 100 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 159

Query: 226 SILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           + LCR     EA  F   ++D    PD   Y  L+ G C++   +EA+ +  EM  A ++
Sbjct: 160 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV  Y+ +ID   R G    A  +  EM+  G +PN IT++NL+R   K  + ++   +
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             QM R     DTITYN +I+ H +    +DA ++L+ M   G +PN  T++++   + +
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 339

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G+   A  +  +M     +PN   Y  L+  +    +  +  ++  +M +  V P++  
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI     +G    + KY  +M +E+ L P    Y  ++    + G L+  E+LV++M
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQM-QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458

Query: 525 VDRGF 529
           +D G 
Sbjct: 459 LDTGL 463



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 173/386 (44%), Gaps = 4/386 (1%)

Query: 146 HSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD     + + G  R  +   A+  +  M++  +   V T+SI++    ++G   +A 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
                M   G  P+   ++ +IS  CR+   S A   FD + K    PD+  Y +L+ G 
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G + E+ + F +M+  G+ PN +TYS +I    + G +  A  +   ML+ G +PN 
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 467

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + + +L+  + K+   EKV   +  M   G   D   Y  LI      G +E A +VL+ 
Sbjct: 468 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSE 527

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           + + G  P+   ++ +   + K  D   A  +  +M     +PN V YN L+     S  
Sbjct: 528 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 587

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                 +   +    + PN  TY  LI   C +G  +NA+    EM+    + P + VY 
Sbjct: 588 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG-ITPDAFVYS 646

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++      AG L++   L+E+M  RG
Sbjct: 647 VLTTGCSSAGDLEQAMFLIEEMFLRG 672



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 161/345 (46%), Gaps = 10/345 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
              +LV  Y ++G   +A      M + G AP     + ++  L R    ++A +    +
Sbjct: 49  VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLR----ADAMALLWKV 104

Query: 245 KD-----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           ++        PDV  Y+ L+  +C+      A++V  EM+  G   N  TY+++I  LCR
Sbjct: 105 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 164

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G +  A     +M + G  P+  T+  L+    K+ R+ +   + ++M     + + + 
Sbjct: 165 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 224

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y  LID   ++G  ++A K++  MV  G  PN  T++ + R + K+G ++ A  +  +M 
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
                P+T+TYN++++      +     +L  EME   + PNV TY I+I   C  G   
Sbjct: 285 RDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 344

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            A   + EM   K LKP + VY  ++    R G +    E+ +KM
Sbjct: 345 KASDLLEEM-TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 20/342 (5%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  + V +    + IL+     +G    A    + +E+ G  PD   +S +IS LC+   
Sbjct: 493 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTAD 552

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A    D +  K  +P+++ Y  L+ G C++G+IS A  VF  +   G+ PN  TY+ 
Sbjct: 553 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 612

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID  C+ G I+ A  ++ EML  G  P++  ++ L      A   E+ + +  +M   G
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
             A   ++N L+D  CK GK+++ +K+L+ ++ +G  PNA T   I   +S+ G ++  H
Sbjct: 673 -HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 731

Query: 413 RMYGKMKDLKCEPNTVTYN-ILMQMFATSK-----------------STDMVLKLKKEME 454
            ++ +++    E     ++ + M M    K                 + D  L L+  + 
Sbjct: 732 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIV 791

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                   ++Y  ++   C  G  + A   ++EM +   L+P
Sbjct: 792 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 833



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 185/453 (40%), Gaps = 90/453 (19%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDLY  + +I    KV + + +  +   M+ R +     T+S L+  Y++ G    A   
Sbjct: 395 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 454

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------ 247
             RM + G  P+ + +  ++    +     +  S F S+ D+                  
Sbjct: 455 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSS 514

Query: 248 -------FE-----------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                  F            PDV VY++L+ G C+  +  +A  +  EM   G+ PN+  
Sbjct: 515 SGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 574

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +ID LC+ G I+ A +VF  +L  G  PN +T+ +L+    K         +YN+M 
Sbjct: 575 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 634

Query: 350 RLGCEADTITY----------------------------------NFLIDCHCKDGKLED 375
             G   D   Y                                  N L+D  CK GK+++
Sbjct: 635 ATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQE 694

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            +K+L+ ++ +G  PNA T   I   +S+ G ++  H ++ +++    E     ++ L  
Sbjct: 695 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 754

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                   DM+         N+ +  ++    +I  +C  G+ + A   +R++I  K   
Sbjct: 755 --------DMI---------NQGKIPLDVVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAP 796

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G S Y  ++  L R G+L +   L+++M  RG
Sbjct: 797 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 134/325 (41%), Gaps = 34/325 (10%)

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           S   +L D       V   LV  + ++G + +A  V   M+  G+ P++   + ++  L 
Sbjct: 34  SIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLL 93

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           R   +     V   M+  G  P+  T++ L+  + K    +   +V  +M+  GC  +T+
Sbjct: 94  RADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTV 153

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TYN LI   C+ G +E+A      M   G  P+  T+  +   + K    N A  +  +M
Sbjct: 154 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 213

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
              + +PN V Y  L+  F    + D   K+ KEM    V+PN  TY  L+   C MG  
Sbjct: 214 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 273

Query: 479 NNAYKYIREMI----------------------------------EEKCLKPGSSVYEMV 504
           + A   +++M+                                  E   + P    Y ++
Sbjct: 274 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIM 333

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           +  L ++G+ +K  +L+E+M  +G 
Sbjct: 334 IHGLCQSGEPEKASDLLEEMTTKGL 358


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 201/389 (51%), Gaps = 6/389 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  V     + + +    K++Q+    +  + M    V  TV + +IL+    R     
Sbjct: 90  RPSIVE----FGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVD 145

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
            AV  + +M + G  PD I F+ +I+ +C + +   A   ++ + +   EPDVI Y  L+
Sbjct: 146 FAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLI 205

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C +GN + A  VF++M+  G +PNV TY+ +ID+LC+   +  A D  +EM+  G  
Sbjct: 206 NGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIP 265

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P++IT+N+++       +  +  +++ +M++ GC+ D +TYN +ID   KD  + DA   
Sbjct: 266 PDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADF 325

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L+ MV +G  P+  T+  I   +  LG +N A R++ KM+   C+P+ V YN ++     
Sbjct: 326 LSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCK 385

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +  +  ++   EM +  + PN  TY  ++  +C +G  + A +  +EM+    + P + 
Sbjct: 386 DRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVM-PNTL 444

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + +++  L + G + +   + E M ++G
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKG 473



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 194/380 (51%), Gaps = 6/380 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+   K R  + A  F+  M  + +   V T++ ++      G   EA+  
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRL 360

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F +ME+ GC PD +A++ +I  LC+ R  ++A  F   + D+   P+ + Y+ ++ G+C 
Sbjct: 361 FKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN 420

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA ++F+EM    + PN  T+SI++D LC+ G ++ A  VF  M E G EPN  T
Sbjct: 421 LGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYT 480

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N LM  +    +  +  +V+  M   GC  D  +YN LI+ +C   +++ A  +L  M 
Sbjct: 481 YNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMS 540

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            K   PN  T+N I + +  +G +  A  ++ KM      P  +TY+IL+         D
Sbjct: 541 VKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLD 600

Query: 445 MVLKLKKEMEENEVEPNVNTYRILI-TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
             LKL K M+E ++EP++  Y ILI  M+ G G    A     ++  +    PG + Y +
Sbjct: 601 EALKLFKSMKEKKLEPDIILYTILIEGMFIG-GKLEVAKGLFSKLSADGIQPPGRT-YNV 658

Query: 504 VLQQLRRAGQLQKHEELVEK 523
           +++ L + G   +  EL  K
Sbjct: 659 MIKGLLKEGLSDEAYELFRK 678



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 202/419 (48%), Gaps = 39/419 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  +  +IN      +  +A    + M     E  V +++ L+     +G    AVH 
Sbjct: 161 PDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHV 220

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F +ME+ GC P+ + ++ +I  LC+ R  ++A  F   +  +   PD I Y ++V G C 
Sbjct: 221 FKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCC 280

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G ++EA R+F+ M+  G +P+V TY+I+ID+L +   +  A D  +EM++ G  P+ +T
Sbjct: 281 LGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT 340

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++       +  + ++++ +M++ GC+ D + YN +ID  CKD  + DA++ L+ MV
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMV 400

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK---------------DLKC------ 423
            +G  PNA T++ I      LG ++ A +++ +M                D  C      
Sbjct: 401 DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVS 460

Query: 424 --------------EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                         EPN  TYN LM  +      +   K+ + M      P++++Y ILI
Sbjct: 461 EARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILI 520

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             YC     + A   + +M  +K L P +  Y  +++ L   G+L   +EL +KM   G
Sbjct: 521 NGYCNSRRMDKAKALLTQMSVKK-LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 199/414 (48%), Gaps = 37/414 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K R  + A  F+  M  R +     T++ +V      G   EA   F RME
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD + ++I+I  L + R  ++A  F   + D+   PDV+ YT ++ G C  G ++
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN 355

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA R+F++M+  G +P+V  Y+ +ID+LC+   +  A +  +EM++ G  PN++T++ ++
Sbjct: 356 EAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + ++  Q++ +M       +T+T++ L+D  C++G + +A  V  +M  KG  
Sbjct: 416 HGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVE 475

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N +         +N A +++  M    C P+  +YNIL+  +  S+  D    L
Sbjct: 476 PNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKAL 535

Query: 450 KKEMEENEVEPN-----------------------------------VNTYRILITMYCG 474
             +M   ++ PN                                   + TY IL+   C 
Sbjct: 536 LTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCK 595

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            GH + A K  + M E+K L+P   +Y ++++ +   G+L+  + L  K+   G
Sbjct: 596 HGHLDEALKLFKSMKEKK-LEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 145/325 (44%), Gaps = 36/325 (11%)

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           SF+   +    P ++ +   +    +    S    +  +M + G+   VY+ +I+I+ LC
Sbjct: 80  SFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLC 139

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           R   +  A  V+ +M ++G +P+ ITF  L+       + +  +++YN+M R G E D I
Sbjct: 140 RLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVI 199

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK-------------- 404
           +YN LI+  C  G    A+ V   M + GC PN  T+N I   + K              
Sbjct: 200 SYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM 259

Query: 405 ---------------------LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
                                LG +N A R++ +M+   C+P+ VTYNI++      +  
Sbjct: 260 VGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLV 319

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +       EM +  + P+V TY  ++   C +G  N A +  ++M E+K  KP    Y  
Sbjct: 320 NDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM-EQKGCKPDVVAYNT 378

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L +   +    E + +MVDRG
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRG 403



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P  V    + H   NL     Q D A      M  RNV     TFSILV    + G+ +E
Sbjct: 406 PNAVTYSTILHGFCNLG----QLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSE 461

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
           A   F  M E G  P+   ++ +++  C + + +EA+  F+ +  K   PD+  Y  L+ 
Sbjct: 462 ARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILIN 521

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+C +  + +A+ +  +M +  + PN  TY+ ++  LC  G++  A ++F +M   G  P
Sbjct: 522 GYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLP 581

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
             +T++ L+    K    ++ L+++  MK    E D I Y  LI+     GKLE A  + 
Sbjct: 582 TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLF 641

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           + +   G  P   T+N++ + + K G  + A+ ++ K K +K
Sbjct: 642 SKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMK 683


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 194/377 (51%), Gaps = 3/377 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MIN   K  + D A   ++ M        V +++ ++  + +A     A+    +M 
Sbjct: 47  YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 106

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             GC PD ++++ VI+ LC+  +  EA    D +  +  +P+VI Y  LV G+CR G++ 
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 166

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNL 328
            A  + R+M   G +PN  TY+ ++  LC   ++  A  +F EM E G C P+  T++ +
Sbjct: 167 GAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTI 226

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +   VK+ + +   ++   M   GC  + +TY+ L+   CK GKL++A  +L  M R GC
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 286

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +PN  T+N I     KLG ++ A+ +  +M D  C+PN VTY +L+  F      +  + 
Sbjct: 287 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 346

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L + M E    PN+ TY  L+ M+C       A + +  MI++ C+ P    Y  V+  L
Sbjct: 347 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV-PNVVSYNTVIAGL 405

Query: 509 RRAGQLQKHEELVEKMV 525
            +A ++ +   L+E+M+
Sbjct: 406 CKATKVHEGVLLLEQML 422



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 177/346 (51%), Gaps = 3/346 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ ++    ++    +A+     M + G AP+  +++ V+   C+  R   A    + +
Sbjct: 46  TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 105

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +   PDV+ YT ++ G C+   + EA RV  +M   G QPNV TY  ++D  CR G +
Sbjct: 106 VMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDL 165

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADTITYNF 362
             A ++  +M E G  PN+IT+NN+M       + +  LQ++ +M+  G C  D  TY+ 
Sbjct: 166 DGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYST 225

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           ++D   K GK++DA +++ +MV KGC+PN  T++ +   + K G ++ A  +  +M    
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 285

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C PN VTYN ++         D    L +EM +   +PNV TY +L+  +C  G   +A 
Sbjct: 286 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAI 345

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             +  M+ EK   P    Y  +L    +  ++++  +L+  M+ +G
Sbjct: 346 GLVEVMV-EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 196/421 (46%), Gaps = 39/421 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +IN   K+ Q D A   +D M  R  +  V T+  LV  + R G    AV  
Sbjct: 112 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 171

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-------DKF---------- 248
             +M E G  P+ I ++ ++  LC  R+   A   F  ++       D F          
Sbjct: 172 VRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLV 231

Query: 249 --------------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
                                P+V+ Y++L+ G C+AG + EA  + + M  +G  PN+ 
Sbjct: 232 KSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV 291

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+ +ID  C+ G+I  A+ +  EM++ GC+PN +T+  L+    K  + E  + +   M
Sbjct: 292 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 351

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              G   +  TYN L+D  CK  ++E A ++L+SM++KGC PN  ++N +   + K   V
Sbjct: 352 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 411

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           +    +  +M    C P+ VT+N ++     +   D+  +L   ++E+   PN+ TY  L
Sbjct: 412 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C    ++ A   +REM  ++   P    Y  V+  L ++ ++ +  +L  +M+  G
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531

Query: 529 F 529
            
Sbjct: 532 L 532



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 173/343 (50%), Gaps = 4/343 (1%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           ++R    AG  ++AV  F  M +  C PD + ++ +I+ L +  R  +A    + + D  
Sbjct: 16  ILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           F P+V  Y  ++ G+C+A  +  A  +  +M M G  P+V +Y+ VI+ LC+  Q+  A 
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            V  +M++ GC+PN IT+  L+    +    +  +++  +M   G   + ITYN ++   
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194

Query: 368 CKDGKLEDAIKVLNSMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           C   KL+ A+++   M   G C P+  T++ I   + K G V+ A R+   M    C PN
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VTY+ L+     +   D    L + M  +   PN+ TY  +I  +C +G  + AY  + 
Sbjct: 255 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 314

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           EM++  C +P    Y ++L    + G+ +    LVE MV++G+
Sbjct: 315 EMVDGGC-QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 176/350 (50%), Gaps = 11/350 (3%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + P+L  Y+ ++++  K  + + A   +  M  +     V +++ ++    +A    E V
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
               +M    C PD + F+ +I  +C+  R   A   F+ +++    P+++ Y +LV G 
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 475

Query: 263 CRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           C++    +AE + REM +  G  P++ TY+ VID LC+  ++ RA+ +F +ML  G  P+
Sbjct: 476 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 535

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T++ ++    K    ++   V   M + G +   ITY  LID  CK G L+ A+++L 
Sbjct: 536 DVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 595

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            ++ KG  P+  TF++    +SK G +  A  +   M      P+TVTYN L++ F  + 
Sbjct: 596 LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDAS 655

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            T+  + L + M +   EP+  TY  L+      GH  +   Y ++++ E
Sbjct: 656 RTEDAVDLFEVMRQCGCEPDNATYTTLV------GHLVDKKSY-KDLLAE 698



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 149/276 (53%), Gaps = 3/276 (1%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           V+ +++RG C AG  S+A   FREM      P+  TY+ +I+ L +  ++  A  +  EM
Sbjct: 12  VHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           ++ G  PN  ++N ++    KA+R E  L +  QM   GC  D ++Y  +I+  CK  ++
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           ++A +V++ M+++GC PN  T+  +     ++GD++GA  +  KM +    PN +TYN +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190

Query: 434 MQMFATSKSTDMVLKLKKEMEEN-EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           M    + +  D  L+L KEMEE+    P+V TY  ++      G  ++A + +  M+ + 
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  P    Y  +L  L +AG+L +   L+++M   G
Sbjct: 251 C-SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 285



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 3/295 (1%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            ++ M S N    + TF+ ++    +      A   FN ++E GC P+ + ++ ++  LC
Sbjct: 417 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 476

Query: 230 RKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           + RR  +A+     +  K    PD+I Y  ++ G C++  +  A ++F +M   G+ P+ 
Sbjct: 477 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 536

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TYSIVI +LC+   +  A++V   ML+ G +P +IT+  L+    K    +K L++   
Sbjct: 537 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 596

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           +   G   D +T++  ID   K G+L  A ++L +M+R G  P+  T+N + +       
Sbjct: 597 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASR 656

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS-TDMVLKLKKEMEENEVEPN 461
              A  ++  M+   CEP+  TY  L+      KS  D++ ++ K M +   + N
Sbjct: 657 TEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 711



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 187/423 (44%), Gaps = 41/423 (9%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y+ +I+   K+ + D A+H ++ M     +  V T+++L+  + + G A +A+ 
Sbjct: 287 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 346

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M E G  P+   ++ ++ + C+K     A     S+  K   P+V+ Y  ++ G C
Sbjct: 347 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 406

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN-- 321
           +A  + E   +  +M      P++ T++ +IDA+C+  ++  A+++F  + E GC PN  
Sbjct: 407 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 466

Query: 322 ----------------------------------SITFNNLMRVHVKASRTEKVLQVYNQ 347
                                              IT+N ++    K+ R ++  +++ Q
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 526

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M   G   D +TY+ +I   CK   +++A  VL  M++ G +P A T+  +     K G+
Sbjct: 527 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 586

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A  +   +      P+ VT++I +   +         +L + M    + P+  TY  
Sbjct: 587 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 646

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK-HEELVEKMVD 526
           L+  +C      +A      M +  C +P ++ Y  ++  L      +    E+ + MVD
Sbjct: 647 LLKGFCDASRTEDAVDLFEVMRQCGC-EPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVD 705

Query: 527 RGF 529
            GF
Sbjct: 706 TGF 708



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 4/186 (2%)

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M R G +A    +  ++   C  G+  DA+     M  K C P++ T+N +   +SK   
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A R+  +M D    PN  +YN ++  F  +   +  L L ++M      P+V +Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I   C +   + A + + +MI+  C +P    Y  ++    R G L    ELV KM +R
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGC-QPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178

Query: 528 GFTARP 533
           G+  RP
Sbjct: 179 GY--RP 182


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 194/379 (51%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   ++ +   A H + LM+ +     V ++S +V  Y R G   +       M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+   +  +I +LCR  + +EA+ +F + ++    PD +VYT L+ G+C+ G+I 
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A + F EM    I P+V TY+ +I   C+ G +  A  +F EM   G EP+S+TF  L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA   +   +V+N M + GC  + +TY  LID  CK+G L+ A ++L+ M + G  
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N I   + K G++  A ++ G+ +      +TVTY  LM  +  S   D   ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEM    ++P + T+ +L+  +C  G   +  K +  M+  K + P ++ +  +++Q  
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYC 607

Query: 510 RAGQLQKHEELVEKMVDRG 528
               L+    + + M  RG
Sbjct: 608 IRNNLKAATAIYKDMCSRG 626



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 195/424 (45%), Gaps = 39/424 (9%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           ++PD+  Y  ++N   +  + D  W  I++MK + ++     +  ++    R    AEA 
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---------------- 247
            AF+ M   G  PD + ++ +I   C++     A  FF  +  +                
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396

Query: 248 --------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
                                EPD + +T L+ G+C+AG++ +A RV   M  AG  PNV
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ +ID LC+ G +  A+++  EM ++G +PN  T+N+++    K+   E+ +++  +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
            +  G  ADT+TY  L+D +CK G+++ A ++L  M+ KG  P   TFN++       G 
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +    ++   M      PN  T+N L++ +    +      + K+M    V P+  TY  
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           L+  +C   +   A+   +EM + K      S Y ++++   +  +  +  E+ ++M   
Sbjct: 637 LVKGHCKARNMKEAWFLFQEM-KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

Query: 528 GFTA 531
           G  A
Sbjct: 696 GLAA 699



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/455 (22%), Positives = 188/455 (41%), Gaps = 57/455 (12%)

Query: 131 VLSFFNWVTARPE------------FVHSPDLYHEMINLAG-----KVRQFDLAWHFIDL 173
           VL FF+W  +R +             V S DL      ++      K+   D    F DL
Sbjct: 104 VLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 163

Query: 174 MKSRNVEITVD--TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           +     +   D   F +  +  V  GL  EA   F +M  YG      + ++ ++ L + 
Sbjct: 164 LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223

Query: 232 --RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             + A+    F +  +     +V  Y  ++   C+ G I EA  +   M++ G  P+V +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           YS V++  CR G++ +   +   M   G +PNS  + +++ +  +  +  +  + +++M 
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343

Query: 350 RLGCEADTITYNFLIDCHCKDGKLE----------------------------------- 374
           R G   DT+ Y  LID  CK G +                                    
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +A K+ + M  KG  P++ TF  +     K G +  A R++  M    C PN VTY  L+
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                    D   +L  EM +  ++PN+ TY  ++   C  G+   A K + E  E   L
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGL 522

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              +  Y  ++    ++G++ K +E++++M+ +G 
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 3/255 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y  +I+   K    D A   +  M    ++  + T++ +V    ++G   EAV 
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
                E  G   D + ++ ++   C+     +AQ     +  K  +P ++ +  L+ G+C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G + + E++   M   GI PN  T++ ++   C    +  A  ++ +M   G  P+  
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+ NL++ H KA   ++   ++ +MK  G      TY+ LI    K  K  +A +V + M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692

Query: 384 VRKGCNPNASTFNMI 398
            R+G   +   F+  
Sbjct: 693 RREGLAADKEIFDFF 707



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K  + D A   +  M  + ++ T+ TF++L+  +   G+  +     N M 
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G AP+   F+ ++   C +     A + + D       PD   Y NLV+G C+A N+ 
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +F+EMK  G   +V TYS++I    +  +   A +VF +M   G   +   F+   
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
               K  R + ++             D I  N+L+D
Sbjct: 709 DTKYKGKRPDTIVD----------PIDEIIENYLVD 734


>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 207/419 (49%), Gaps = 7/419 (1%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           ++S   V  V+E+ C  R          FF W   +  F H    Y+ M+++  K RQF+
Sbjct: 92  NLSHDLVIDVLERFCHARK-----PAFRFFCWAGEKQGFEHDSRTYNSMMSILAKTRQFE 146

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
                ++ M  + V +T+DTFSI +R +  A    +AV  F  M++Y         + ++
Sbjct: 147 TVVSMLEEMGGKGV-LTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHLL 205

Query: 226 SILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             L R +   EAQ+ F++LK +F P++  YT L+ GWC+  N+ EA  V+ EM   G +P
Sbjct: 206 DSLGRAKLGKEAQALFENLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKP 265

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++  ++I+++ L R  Q + A  +F  M   G  P+  ++  L+R   + S+ E+ ++ +
Sbjct: 266 DIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYF 325

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M   GC+ D   Y  LI       +++    +L  M  +GC P+  T+N + + +++L
Sbjct: 326 QEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRL 385

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
              + A R+Y KM     EP   TYN++M+ +  +++ +M   +  EM      P+ N+Y
Sbjct: 386 KMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSY 445

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            +LI      G    A KY+ EM+ EK +K     Y      L R G     EEL +++
Sbjct: 446 TVLIGGLISQGRSGEACKYLEEML-EKGMKAPQLDYNKFGADLSRGGNPDILEELAQRL 503


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 197/423 (46%), Gaps = 38/423 (8%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD +     +AG  K  + D+A    +   + +    V  +S L+    + G   EA   
Sbjct: 145 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKL 204

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F +M E  C PD + F+ ++  LC+  R  EAQ   ++++D+   P+VI Y++L+ G C+
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +A+ VF+ M + GI+PNV TY+ +I   C    +  A  +  EM   GC P+ IT
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI-------------------- 364
           +N L+    K  R  +  +++  MK   C  D ITY+ LI                    
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384

Query: 365 ---------------DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
                          + +C  G ++DA ++L  MV   C+P+  T+  +     K+G + 
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 444

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A R+  +M    C+PN VTY  L+  F  +    +  KL +EM  N V+PNV TYR LI
Sbjct: 445 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +CG G    A K +  +  ++  K     Y +++  L R G++    EL+E +   G 
Sbjct: 505 GGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGT 564

Query: 530 TAR 532
             R
Sbjct: 565 PPR 567



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 193/414 (46%), Gaps = 37/414 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   KV +   A+  +  MK   +   V T+S ++  + R      A   F +M 
Sbjct: 45  YNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV 104

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+ + ++ ++S LCR     EA    D ++++  +PD   Y  L+ G C+ G I 
Sbjct: 105 ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKID 164

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +VF +       P+V  YS +I  LC+ G++  A  +F +M E  CEP+ +TF  LM
Sbjct: 165 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALM 224

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R ++  QV   M+   C  + ITY+ LID  CK G++ DA +V   M+ +G  
Sbjct: 225 DGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 284

Query: 390 PNASTFNMIFR--CIS---------------------------------KLGDVNGAHRM 414
           PN  T+N +    C++                                 K G    A+R+
Sbjct: 285 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 344

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +G MK   C P+ +TY+ L+  F   +  DM   L  +M +  V P+V T+  L+  YC 
Sbjct: 345 FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCN 404

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G  ++A + + EM+   C  P    Y  ++    + G++ +   ++++M  RG
Sbjct: 405 AGLVDDAERLLEEMVASDC-SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 178/377 (47%), Gaps = 2/377 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  Q   A      M  R +E  V T++ L+  +        A+     M 
Sbjct: 255 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 314

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
             GC PD I ++ +I  LC+  RA EA   F  +K KF  PDVI Y+ L+ G+C+   I 
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F +M    + P+V T+S +++  C  G +  A  +  EM+   C P+  T+ +L+
Sbjct: 375 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 434

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R  +  +V  +M + GC+ + +TY  LID  C+ GK   A K+L  MV  G  
Sbjct: 435 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQ 494

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           PN  T+  +       GD+  A +M  ++ +D  C+ +   Y ++M     +      L+
Sbjct: 495 PNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALE 554

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L + ++++   P  + Y  LI   C       A + + EM   +  +P +  YE V+Q+L
Sbjct: 555 LLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQEL 614

Query: 509 RRAGQLQKHEELVEKMV 525
            R G+ ++   L ++++
Sbjct: 615 AREGRHEEANALADELL 631



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 166/341 (48%), Gaps = 1/341 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MI+   K  +   A  +   MK +       T+++L+  + +      A      M+E G
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
            AP+ + +S VI   CR+ +   A   F  + ++   P+++ Y  L+ G CR G + EA 
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +  EM+  G+QP+ ++Y  ++  LC+ G+I  A  VF +     C P+ + ++ L+   
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K  R ++  +++ +M+   CE D +T+  L+D  CK  +L++A +VL +M  + C PN 
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T++ +   + K G V  A  ++ +M     EPN VTYN L+  F  +   D  L L +E
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M      P++ TY  LI   C  G    A +   +M  + C
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 353



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 168/346 (48%), Gaps = 2/346 (0%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           E  V T++I++    +A    EA   F +M++ G  P++  ++++I+  C+  +   A  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 240 FFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
               +K+    P+V+ Y+ ++ G+CR   +  A ++FR+M   G  PN+ TY+ ++  LC
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           R G +  A+++  EM E G +P+  +++ LM    K  + +  L+V+       C  D +
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
            Y+ LI   CK G+L++A K+   M    C P+  TF  +   + K   +  A ++   M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           +D  C PN +TY+ L+     +       ++ K M    +EPNV TY  LI  +C     
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           ++A   + EM    CL P    Y  ++  L + G+  +   L   M
Sbjct: 304 DSALLLMEEMTATGCL-PDIITYNTLIDGLCKTGRAPEANRLFGDM 348



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 159/316 (50%), Gaps = 2/316 (0%)

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAE 272
           C  + I ++I+I  LC+  R  EA ++F  +K K   P+   Y  L+ G+C+   +  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + +EMK +G+ PNV TYS VI   CR  ++  A+ +F +M+E GC PN +T+N L+   
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +    ++  ++ ++M+  G + D  +Y+ L+   CK GK++ A+KV        C P+ 
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
             ++ +   + K G ++ A +++ KM++  CEP+ VT+  LM             ++ + 
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           ME+    PNV TY  LI   C  G   +A +  + MI  + ++P    Y  ++       
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI-VRGIEPNVVTYNSLIHGFCMTN 301

Query: 513 QLQKHEELVEKMVDRG 528
            +     L+E+M   G
Sbjct: 302 GVDSALLLMEEMTATG 317



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 36/144 (25%)

Query: 421 LKCEPNTV-----------------------------------TYNILMQMFATSKSTDM 445
           ++CE N +                                   TYN+L+  F        
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L KEM+E+ + PNV TY  +I  +C     + AYK  R+M+E  C+ P    Y  +L
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCM-PNLVTYNTLL 119

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L R G + +  EL+++M +RG 
Sbjct: 120 SGLCRNGLMDEAYELLDEMRERGL 143


>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 201/406 (49%), Gaps = 6/406 (1%)

Query: 124 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF-IDLMKSRNVEIT 182
           HG P  Q L+FFN+   R  F H+P     M+ + G+ R+FD  W   +D+ +     I+
Sbjct: 103 HGNPF-QALAFFNYTNKRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLIS 161

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
             +  +++ R  +     + V +F + ++     D   F+ ++  LC+++   +A++ + 
Sbjct: 162 PRSVQVVLGRIAKVCSVKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYH 221

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           SLK  F PD+  +  L+ GW  A    EAE  F EM+  G++P+V +Y+ +ID  C+  +
Sbjct: 222 SLKHDFRPDLRTFNILLSGWKSA---EEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGRE 278

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           I RA+ V  +M +    P+ I++ +++       + +K   V  +MK  GC  D   YN 
Sbjct: 279 IERAYKVIDKMRDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNA 338

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
            I   C   +L DA  +++ MV KG +PNA+T+N+ FRC     D+  +  +Y +MK   
Sbjct: 339 AIRNFCIANRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTG 398

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C PNT +   L ++F   +  +M L+L  +M E      +    +L  M C MG      
Sbjct: 399 CLPNTQSCMFLTRLFRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVE 458

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           K   +MI EK  KP +  +  +   +  A + +  + L EKM   G
Sbjct: 459 KCCLQMI-EKGHKPSNVSFRRIKVLMELANKHEALQNLTEKMAMFG 503


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 193/379 (50%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +IN   KV +F  A    D M ++  +  V T++ ++    + G  A A     +ME
Sbjct: 166 FTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKME 225

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+ + +S +I  LCR R  +EA   F  +K K   PD+  YT+L++G C+     
Sbjct: 226 EAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWK 285

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  EM    I P++ T+++++D  C+ G+++ A  V   M E+G EPN +T+++LM
Sbjct: 286 EASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM 345

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             +   +   +  ++++ M   GC+ +  +YN LI+ +CK  ++++A+++ N M+ +G  
Sbjct: 346 YGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT 405

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  ++N +     +LG +  A  ++  M      P+  TY+IL+  F          +L
Sbjct: 406 PNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRL 465

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M+   ++PN+  Y IL+   C  G+  +A K   E+  +  L+P   +Y  ++  L 
Sbjct: 466 FRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG-LQPHVQLYTTIINGLC 524

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G L +  E    M   G
Sbjct: 525 KEGLLDEALEAFRNMEADG 543



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 188/397 (47%), Gaps = 8/397 (2%)

Query: 132 LSFFNWVTAR---PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L+ FN +  R   P  +    L   ++ +    + +D+       M+   +   + T SI
Sbjct: 77  LASFNHMLHRKPLPCIIQFAKLLSAIVKMG---QYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
            +  + +            ++ + G  P  + F+ +I+ LC+    ++A   FD +  K 
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            +PDV  Y  ++ G C+ G  + A  + ++M+ AG QPN+ TYS +ID+LCR   +  A 
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           D+F+ M   G  P+  T+ +L++   K SR ++   + N+M  L    D +T+N L+D  
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 313

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK+GK+ +A+ VL +M   G  PN  T++ +    S   DV  A +++  M    C+PN 
Sbjct: 314 CKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNI 373

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            +YNIL+  +  +K  D  ++L  EM    + PN  +Y  LI  +C +G    A    R 
Sbjct: 374 FSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRN 433

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           M     L P    Y ++L    + G L K   L   M
Sbjct: 434 MCTNGNL-PDLFTYSILLDGFCKQGYLGKAFRLFRAM 469



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 109/208 (52%), Gaps = 1/208 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K ++ D A    + M  + +     +++ L+  + + G   EA   F  M 
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
             G  PD   +SI++   C++    +A   F +++  + +P++++YT LV   C++GN  
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++F E+ + G+QP+V  Y+ +I+ LC+ G +  A + F  M   GC P+ I++N ++
Sbjct: 496 DARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVII 555

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADT 357
           R  ++     + L +  +M+  G  AD 
Sbjct: 556 RGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL+   I L G  +Q  L  A+     M+S  ++  +  ++ILV    ++G   +A   
Sbjct: 441 PDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKL 500

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
           F+ +   G  P    ++ +I+ LC++    EA   F +++ D   PD I Y  ++RG  +
Sbjct: 501 FSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQ 560

Query: 265 AGNISEAERVFREMKMAGIQPNV 287
             + S A  +  EM+  G   +V
Sbjct: 561 HKDESRALLLVGEMRDRGFIADV 583


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 193/370 (52%), Gaps = 2/370 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           KVR+FD A   +  M+ R   +   T+++L+    R+G   EA      ME+YG  PD  
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293

Query: 220 AFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            +  +I+ LC+ RR++EA++  D +   + +P+V+VY NL+ G+ R GN  EA ++ +EM
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
             AG+QPN  TY  ++  LC+ GQ+ RA  +  +M+     P++IT+N ++  H +    
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 413

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +   ++ ++M+  G   +  TY+ +I   C+ G+ E A  +L  M  KG  PNA  +  +
Sbjct: 414 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 473

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                + G+V+ A  ++ KM  +   P+   YN L+   +     +   K   +M+E  +
Sbjct: 474 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 533

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            PN  TY  LI  Y   G   +A + ++ M++   LKP   +Y  +L+   ++  ++K  
Sbjct: 534 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG-LKPNDVIYIDLLESYFKSDDIEKVS 592

Query: 519 ELVEKMVDRG 528
              + M+D+G
Sbjct: 593 STFKSMLDQG 602



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 172/386 (44%), Gaps = 4/386 (1%)

Query: 146 HSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD     + + G  R      A+  +  M++  +   V T+SI++    ++G   +A 
Sbjct: 393 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 452

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
                M   G  P+   ++ +IS  CR+   S A   FD + K    PD+  Y +L+ G 
Sbjct: 453 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 512

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G + E+ + F +M+  G+ PN +TYS +I    + G +  A  +   ML+ G +PN 
Sbjct: 513 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + + +L+  + K+   EKV   +  M   G   D   Y  LI      G +E A +VL+ 
Sbjct: 573 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           + + G  P+   ++ +   + K  D   A  +  +M     +PN V YN L+     S  
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 692

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                 +   +    + PN  TY  LI   C +G  +NA+    EM+    + P + VY 
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG-ITPDAFVYS 751

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++      AG L++   L+E+M  RG
Sbjct: 752 VLTTGCSSAGDLEQAMFLIEEMFLRG 777



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 20/342 (5%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  + V +    + IL+     +G    A    + +E+ G  PD   +S +IS LC+   
Sbjct: 598 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 657

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A    D +  K  +P+++ Y  L+ G C++G+IS A  VF  +   G+ PN  TY+ 
Sbjct: 658 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 717

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID  C+ G I+ A  ++ EML  G  P++  ++ L      A   E+ + +  +M   G
Sbjct: 718 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
             A   ++N L+D  CK GK+++ +K+L+ ++ +G  PNA T   I   +S+ G ++  H
Sbjct: 778 -HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 836

Query: 413 RMYGKMKDLKCEPNTVTYN-ILMQMFATSK-----------------STDMVLKLKKEME 454
            ++ +++    E     ++ + M M    K                 + D  L L+  + 
Sbjct: 837 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIV 896

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                   ++Y  ++   C  G  + A   ++EM +   L+P
Sbjct: 897 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 938



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 1/266 (0%)

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +  +C+      A++V  EM+  G   N  TY+++I  LCR G +  A     +M + G 
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+  T+  L+    K+ R+ +   + ++M     + + + Y  LID   ++G  ++A K
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           ++  MV  G  PN  T++ + R + K+G ++ A  +  +M      P+T+TYN++++   
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
              S     +L  EME   + PNV TY I+I   C  G    A   + EM   K LKP +
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT-TKGLKPNA 467

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKM 524
            VY  ++    R G +    E+ +KM
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKM 493



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 185/453 (40%), Gaps = 90/453 (19%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDLY  + +I    KV + + +  +   M+ R +     T+S L+  Y++ G    A   
Sbjct: 500 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 559

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------ 247
             RM + G  P+ + +  ++    +     +  S F S+ D+                  
Sbjct: 560 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSS 619

Query: 248 -------FE-----------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                  F            PDV VY++L+ G C+  +  +A  +  EM   G+ PN+  
Sbjct: 620 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 679

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +ID LC+ G I+ A +VF  +L  G  PN +T+ +L+    K         +YN+M 
Sbjct: 680 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 739

Query: 350 RLGCEADTITY----------------------------------NFLIDCHCKDGKLED 375
             G   D   Y                                  N L+D  CK GK+++
Sbjct: 740 ATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQE 799

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            +K+L+ ++ +G  PNA T   I   +S+ G ++  H ++ +++    E     ++ L  
Sbjct: 800 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 859

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                   DM+         N+ +  ++    +I  +C  G+ + A   +R++I  K   
Sbjct: 860 --------DMI---------NQGKIPLDVVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAP 901

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G S Y  ++  L R G+L +   L+++M  RG
Sbjct: 902 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934


>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Brachypodium distachyon]
          Length = 649

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 196/392 (50%), Gaps = 3/392 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W  A  EF H+P  Y +M+++ GK RQF+     +  M  +   + +D F I ++ +
Sbjct: 224 FFQWAAASDEFEHTPVTYCKMLHILGKARQFETMVALVQEM-GKAGALCMDAFKIAIKSF 282

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             AG    AV  F  M  +G      +F+ ++  L ++    EA   FD ++D++ PD+ 
Sbjct: 283 AAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYTPDLR 342

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+  WC A N+ EA RV+ +M   G++P+V  ++ +ID L R  +   A  +F  M
Sbjct: 343 SYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELM 402

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  T+  L+R H K  + +  ++ + +M+  GC+ +  TY  L+  +    ++
Sbjct: 403 KAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRM 462

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +    +L  M +KGC P+  T+N + + ++     + A R+Y KM     EP   TYN++
Sbjct: 463 DRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMM 522

Query: 434 MQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           M+  F   ++  M   + +EM    + P+VN+Y + I  +   G    A K++ EMI +K
Sbjct: 523 MKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMI-QK 581

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            +K     Y        +AG+     EL +K+
Sbjct: 582 GMKAPQIDYNKFAADFSKAGKPDILYELAQKV 613



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 2/204 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K  + D+A    + M+    +  V T++ L+  Y  A            M 
Sbjct: 414 YTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMA 473

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAG-NI 268
           + GC PD   ++ +I +L  +    +A   +  +  K  EP +  Y  +++ +   G N 
Sbjct: 474 QKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNY 533

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           +    V+ EM   GI P+V +Y++ I+   R G+   A     EM++ G +   I +N  
Sbjct: 534 AMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKF 593

Query: 329 MRVHVKASRTEKVLQVYNQMKRLG 352
                KA + + + ++  ++K  G
Sbjct: 594 AADFSKAGKPDILYELAQKVKFTG 617


>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
 gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
          Length = 607

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 234/477 (49%), Gaps = 32/477 (6%)

Query: 72  RKNPNPSSNSNPSL--NPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGI--- 126
           ++N +P+SNSNP+   N  FT+ ++ L   +I    S+  +  R  IE   G+   +   
Sbjct: 64  QQNSSPTSNSNPNYHQNDFFTLCNI-LKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDH 122

Query: 127 ----PLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAW-HFIDLMKSRNVE- 180
               P L + S F W   +P F  S  L++ M+N  GK R+F  AW   +D +       
Sbjct: 123 FDSSPKL-LHSVFLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGD 181

Query: 181 -ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI--------AFSIVISILCRK 231
            ++ DTF+IL+RRY RAG++  A+  F    EY  + D I         F I++  LC++
Sbjct: 182 LVSSDTFAILIRRYTRAGMSEAAIRTF----EYASSLDLIHNSEAGTSLFEILLDSLCKE 237

Query: 232 RRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
                A  +FD   +K   + P V +Y  L+ GW R+  +  AER++ EMK   ++P+V 
Sbjct: 238 GHVRVATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVV 297

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY  +++   R  ++ RA ++  EM   G + N+I +N ++    +A R ++VL +    
Sbjct: 298 TYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHF 357

Query: 349 KRLGCEADTI-TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
             L  E  TI TYN L+  +CK G L  A K+L  M+ +   P  +T+N  FR  SK   
Sbjct: 358 -FLCEEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRK 416

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +     +Y KM +    P+ +TY++L++M    +  D+ +++ KEM     + ++ T  +
Sbjct: 417 IEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTM 476

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              + C M  +  A+    +M+  + + P    +  +  + R+ G  +    L + M
Sbjct: 477 FTHLLCKMQRFEEAFAEFEDML-RRGIVPQYLTFHRLNDEFRKQGLTELARRLCKLM 532



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 6/299 (2%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           V   P +V S  +Y+ ++N   + R+   A      MK +NV+ +V T+  LV  Y R  
Sbjct: 251 VEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMR 310

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYT 256
               A+   + M+  G   + I ++ +I  L    R  E     +      E P +  Y 
Sbjct: 311 RVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEEGPTISTYN 370

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           +LV+G+C+AG++  A ++ + M    + P   TY+       +C +I    +++ +M+E 
Sbjct: 371 SLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEEGMNLYTKMIES 430

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P+ +T++ L+++  +  R +  +Q+  +M+  GC+ D  T        CK  + E+A
Sbjct: 431 GYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTMFTHLLCKMQRFEEA 490

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL---KCEPNTVTYNI 432
                 M+R+G  P   TF+ +     K G    A R+   M  +   K  PN  TYN+
Sbjct: 491 FAEFEDMLRRGIVPQYLTFHRLNDEFRKQGLTELARRLCKLMSSVSHSKNLPN--TYNV 547



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/282 (20%), Positives = 111/282 (39%), Gaps = 40/282 (14%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGI----QPNVYTYSIVIDALCRCGQITRAHDV 309
            +  L+R + RAG    A R F       +    +     + I++D+LC+ G +  A D 
Sbjct: 187 TFAILIRRYTRAGMSEAAIRTFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDY 246

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI-TYNFLIDCHC 368
           F   +E   +P                                C   ++  YN L++   
Sbjct: 247 FDRKVEK--DP--------------------------------CWVPSVRIYNILLNGWF 272

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           +  KL+ A ++   M +K   P+  T+  +    S++  V  A  +  +MK    + N +
Sbjct: 273 RSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAI 332

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YN ++   A +     VL + +     E  P ++TY  L+  YC  G    A K ++ M
Sbjct: 333 VYNPIIDALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGASKILKMM 392

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           I  +   P  + Y    +   +  ++++   L  KM++ G+T
Sbjct: 393 ISREVF-PTPTTYNYFFRHFSKCRKIEEGMNLYTKMIESGYT 433


>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
 gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
          Length = 634

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 193/392 (49%), Gaps = 3/392 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W T    F H+   Y +M+++ GK RQF+     I  M  +   +++D F + ++ +
Sbjct: 214 FFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEM-GKAGALSMDAFKVAIKSF 272

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             AG    AV  F  M + G      +F+ ++  L ++    EA+  FD +  ++ PD+ 
Sbjct: 273 AAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSPDLR 332

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+  WC A N+ EA RV+ EM   G+ P+V  ++ +I+ L R  +   A  +F  M
Sbjct: 333 SYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELM 392

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  T+  L+R H K  + +  ++ + +M+   C+ D  TY  L+  +    ++
Sbjct: 393 KAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQM 452

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +    VL  M +KGC P+A T+N + + ++     + A R+Y KM     EP   TYN++
Sbjct: 453 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMM 512

Query: 434 MQMFATSKST-DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           M+ +    S   M   + +EM +  + P+VN+Y + I  +   G    AYKYI EMI  K
Sbjct: 513 MKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMI-NK 571

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            +K     Y        +AG+     EL +K+
Sbjct: 572 GMKAPQIDYNKFAADFSKAGKPDILFELAQKV 603



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 2/204 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K  + D+A    + M+    +  V T++ L+  Y  A            M 
Sbjct: 404 YTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMT 463

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRA-GNI 268
           + GC PD   ++ +I +L  +    +A   +  + K   EP +  Y  +++ +     N 
Sbjct: 464 QKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNY 523

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           +    V+ EM   GI P+V +Y++ I+   R G+   A+    EM+  G +   I +N  
Sbjct: 524 AMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKF 583

Query: 329 MRVHVKASRTEKVLQVYNQMKRLG 352
                KA + + + ++  ++K  G
Sbjct: 584 AADFSKAGKPDILFELAQKVKFAG 607


>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
 gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
          Length = 657

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 184/364 (50%), Gaps = 2/364 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W TA   F H+   Y +M+++ GK RQF++    I  M      +++D F + ++ +
Sbjct: 216 FFRWATASGGFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGKVGA-LSMDAFKVAIKSF 274

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             AG    AV  F  M++ G      +F+ ++  L  +    EA+  FD +  ++ PD+ 
Sbjct: 275 AAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQYSPDLR 334

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+  WC A N+ EA RV+ EM   G++P+V  ++ +I+ L R  +   A  +F  M
Sbjct: 335 SYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELM 394

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  T+  L+R H K  + +  ++ + +M+   C+ D  TY  L+  +    ++
Sbjct: 395 KAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRM 454

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +    VL  M +KGC P+A T+N + + ++     + A R+Y KM     EP   TYN++
Sbjct: 455 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMM 514

Query: 434 MQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           M+  F   ++  M   + +EM    + P+VN+Y + I  +   G    AYKYI EMI + 
Sbjct: 515 MKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKG 574

Query: 493 CLKP 496
              P
Sbjct: 575 MTAP 578


>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
 gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
 gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
          Length = 634

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 193/392 (49%), Gaps = 3/392 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W T    F H+   Y +M+++ GK RQF+     I  M  +   +++D F + ++ +
Sbjct: 214 FFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEM-GKAGALSMDAFKVAIKSF 272

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             AG    AV  F  M + G      +F+ ++  L ++    EA+  FD +  ++ PD+ 
Sbjct: 273 AAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSPDLR 332

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+  WC A N+ EA RV+ EM   G+ P+V  ++ +I+ L R  +   A  +F  M
Sbjct: 333 SYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELM 392

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  T+  L+R H K  + +  ++ + +M+   C+ D  TY  L+  +    ++
Sbjct: 393 KAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQM 452

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +    VL  M +KGC P+A T+N + + ++     + A R+Y KM     EP   TYN++
Sbjct: 453 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMM 512

Query: 434 MQMFATSKST-DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           M+ +    S   M   + +EM +  + P+VN+Y + I  +   G    AYKYI EMI  K
Sbjct: 513 MKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMI-NK 571

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            +K     Y        +AG+     EL +K+
Sbjct: 572 GMKAPQIDYNKFAADFSKAGKPDILFELAQKV 603



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 2/204 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K  + D+A    + M+    +  V T++ L+  Y  A            M 
Sbjct: 404 YTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMT 463

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRA-GNI 268
           + GC PD   ++ +I +L  +    +A   +  + K   EP +  Y  +++ +     N 
Sbjct: 464 QKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNY 523

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           +    V+ EM   GI P+V +Y++ I+   R G+   A+    EM+  G +   I +N  
Sbjct: 524 AMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKF 583

Query: 329 MRVHVKASRTEKVLQVYNQMKRLG 352
                KA + + + ++  ++K  G
Sbjct: 584 AADFSKAGKPDILFELAQKVKFAG 607


>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 208/418 (49%), Gaps = 6/418 (1%)

Query: 107 ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           +S S V  V++     R G   +    FF W   +  +VHSP++Y+ M+++ GK ++FDL
Sbjct: 175 VSNSLVMQVLK-----RFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEFDL 229

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            W  +  MK     + +DT S ++RR+ +A    +AV AF  M +YG   D  A + ++ 
Sbjct: 230 MWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLD 289

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            L + +    A +  D  K         +  L+ GWC+  N  +A +V  E K  G +P+
Sbjct: 290 ALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPD 349

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           V+TY+  I++ C      +  +V  EM   GC PN++T+  L+  + KA +  K L+ Y 
Sbjct: 350 VFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYE 409

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +MK+ G   DT  Y+ L+    K G+L+DA +V + M ++G   +  T+N +        
Sbjct: 410 RMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHS 469

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
               A R+  +M++  C+P+  TY+ L++M    K   ++  L   M ++++ P+  TY 
Sbjct: 470 KEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYT 529

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +L+      G    A  +  EM+  K   P  +  +++ ++L     L++ +++ E M
Sbjct: 530 LLVQSLSNSGKLVEACTFFEEMV-SKGFTPMETTVKLLTRKLEIKSMLKEKDQIEELM 586


>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
 gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
          Length = 534

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 206/398 (51%), Gaps = 11/398 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSIL 189
           LSFF W    P++ H    Y EM+++ G++++  L     D +  +SR   +T   F++L
Sbjct: 130 LSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVL 189

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           + RY  A    EA+  F + ++YG   D + F I++  LCR +   EA++ F   KD+F 
Sbjct: 190 LNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFP 249

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +  ++ GWC  G++++A+RV+ E+  + ++P+++TY   I++L + G+++ A  +
Sbjct: 250 PVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKL 309

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M E G  P+    N ++       R  + L+++ +M   GC+AD  TYN LI   CK
Sbjct: 310 FTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCK 369

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             ++E   ++L+ M  KG +PN  T++ I +   K  DV     +  +M+   C  ++ T
Sbjct: 370 INRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVIS---LMQRMEKSGCRLDSDT 426

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN+++ ++ +      V  +  EME N   P+  ++ I++         + A  Y R M 
Sbjct: 427 YNLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTM- 485

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           E + + P     E   + L +A +++K E   E+ + R
Sbjct: 486 ESRGMTP-----EPRTKLLVKAIRMKKDEPATEEPLTR 518



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 8/126 (6%)

Query: 410 GAHR------MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           GAH+      M+ K KD   E + V + IL+      K  +    L  + +++E  P + 
Sbjct: 195 GAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIK 253

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           ++ I++  +C  G   +A +   E+I  K LKP    Y   +  L ++G+L    +L   
Sbjct: 254 SWNIILNGWCVKGSLADAKRVWNEIIASK-LKPDLFTYGTFINSLTKSGKLSTAVKLFTS 312

Query: 524 MVDRGF 529
           M ++G 
Sbjct: 313 MWEKGI 318


>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
          Length = 514

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 206/398 (51%), Gaps = 11/398 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSIL 189
           LSFF W    P++ H    Y EM+++ G++++  L     D +  +SR   +T   F++L
Sbjct: 110 LSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVL 169

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           + RY  A    EA+  F + ++YG   D + F I++  LCR +   EA++ F   KD+F 
Sbjct: 170 LNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFP 229

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +  ++ GWC  G++++A+RV+ E+  + ++P+++TY   I++L + G+++ A  +
Sbjct: 230 PVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKL 289

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M E G  P+    N ++       R  + L+++ +M   GC+AD  TYN LI   CK
Sbjct: 290 FTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCK 349

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             ++E   ++L+ M  KG +PN  T++ I +   K  DV     +  +M+   C  ++ T
Sbjct: 350 INRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVIS---LMQRMEKSGCRLDSDT 406

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN+++ ++ +      V  +  EME N   P+  ++ I++         + A  Y R M 
Sbjct: 407 YNLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTM- 465

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           E + + P     E   + L +A +++K E   E+ + R
Sbjct: 466 ESRGMTP-----EPRTKLLVKAIRMKKDEPATEEPLTR 498



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 8/126 (6%)

Query: 410 GAHR------MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           GAH+      M+ K KD   E + V + IL+      K  +    L  + +++E  P + 
Sbjct: 175 GAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIK 233

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           ++ I++  +C  G   +A +   E+I  K LKP    Y   +  L ++G+L    +L   
Sbjct: 234 SWNIILNGWCVKGSLADAKRVWNEIIASK-LKPDLFTYGTFINSLTKSGKLSTAVKLFTS 292

Query: 524 MVDRGF 529
           M ++G 
Sbjct: 293 MWEKGI 298


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 201/397 (50%), Gaps = 4/397 (1%)

Query: 135 FNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F+       F  SP +  + ++I++     +F+ A      +  +  ++    +++L+R 
Sbjct: 50  FDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRY 109

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
           + R+G    A+  F  M+  G  PD+  +  +++ L +  R  EA+SFFD++ ++   P+
Sbjct: 110 FGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPN 169

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           +  Y  L+  + + G +  A  +F EMK  G QP+V TY+I++DALC  G++  A  +F 
Sbjct: 170 IPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH 229

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           +M   GC P+S T++ L+    K+ R E+  +V+ +M   G   D + YN L+    K G
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            ++   K++  M RKG +P+A +FN I   + K    + A  ++ +M +  C+P+ ++YN
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           IL+  +A         ++ +EM E    P   TY  LI      G  + A+  + EM   
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C +P    Y  ++  L + G+ Q+   L ++M D+G
Sbjct: 410 GC-RPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG 445



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 184/371 (49%), Gaps = 9/371 (2%)

Query: 167 AWHFIDLMKSRNVEITVD-------TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           +W  +D +++   E+  +       T   L+  Y R   + +A   FN+ E + C+P   
Sbjct: 7   SWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVH 66

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           AF+ +I IL        A+  +  L  K  + D   Y  L+R + R+G +  A  +FREM
Sbjct: 67  AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           K+ G +P+ YTY  +++AL + G++  A   F  MLE G  PN  T+N LM    K  + 
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +  L ++ +MKR G +   +TYN L+D  C  G++  A K+ + M   GC+P++ T++ +
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + K G V  AH+++ +M D     + V YN L+   A + + D V KL KEM     
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+  ++  ++         + A +    M+E  C KP    Y +++    R G   +  
Sbjct: 307 HPDAFSFNTIMDALGKANKPDAAREVFARMVESGC-KPDLISYNILIDSYARFGDAAQAR 365

Query: 519 ELVEKMVDRGF 529
           +++E+MV+ GF
Sbjct: 366 QMLEEMVEAGF 376



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 178/371 (47%), Gaps = 2/371 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N  GK  +   A  F D M  R +   + T+++L+  + + G    A+  F  M+
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P  + ++I++  LC   R   A+  F  +  D   PD   Y+ LV G  ++G + 
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA +VFREM   G+  ++  Y+ ++  L + G + R   +  EM   G  P++ +FN +M
Sbjct: 258 EAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIM 317

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA++ +   +V+ +M   GC+ D I+YN LID + + G    A ++L  MV  G  
Sbjct: 318 DALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFI 377

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+N +   ++  G V+ A  +  +M+   C P+ VTYN LM M           +L
Sbjct: 378 PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARL 437

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            ++M++  VEP+  +Y + I         + A    ++M    C     ++Y ++++   
Sbjct: 438 FQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGC-PVDKAMYRILIRAAH 496

Query: 510 RAGQLQKHEEL 520
           RAG  +   +L
Sbjct: 497 RAGDTELEAQL 507



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 5/234 (2%)

Query: 297 LCRCGQITRAHDVFAEMLEVG--CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           L   G +     +  EM+  G    PN++    L+  + + +++     ++NQ +   C 
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACS 62

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                +  LID     G+ E A  V   +V+KGC  +   +N++ R   + G ++ A  M
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +MK    EP+  TY  L+     +            M E  + PN+ TY +L+  +  
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +G  + A     EM + +  +P    Y ++L  L  AG++    +L  KM   G
Sbjct: 183 VGQLDMALGLFAEM-KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 1/206 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +++  GK  + D A      M     +  + +++IL+  Y R G AA+A      M 
Sbjct: 313 FNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
           E G  P+   ++ +I  L    +  EA +  + ++     PDV+ Y  L+    + G   
Sbjct: 373 EAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+F++MK  G++P+  +Y++ ID L    ++  A  +F +M  VGC  +   +  L+
Sbjct: 433 RAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEA 355
           R   +A  TE   Q+ ++ + +  E+
Sbjct: 493 RAAHRAGDTELEAQLKHESQFMPVES 518



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 36/168 (21%)

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI  + +  K  DA  + N      C+P    F  +   +   G+   A  +Y K+    
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C+ +   YN+L++ F  S                                   G  ++A 
Sbjct: 96  CQLDRFAYNVLIRYFGRS-----------------------------------GQLDSAM 120

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  REM + K  +P    Y  ++  L +AG++Q+     + M++RG T
Sbjct: 121 EMFREM-KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLT 167


>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 571

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 203/412 (49%), Gaps = 27/412 (6%)

Query: 81  SNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTA 140
           SNP ++P+ T               S   STVR  +  SC   +     + L FF+WV  
Sbjct: 165 SNPIISPNST---------------SFDHSTVRQTL--SC---YANDWKRALEFFDWVQT 204

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD-TFSILVRRYVRAGLA 199
           +  F H+ D Y+ MI++ GK  +FDL W  I  MK+  V      TF  + +RY  A L 
Sbjct: 205 QCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAAHLV 264

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTN 257
            EA++A+ R EE+    D+ ++S +I  LC  +   EA+  F  +S    F  DV +Y  
Sbjct: 265 EEAMNAYYRTEEFNLR-DETSYSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVKIYNI 323

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++RGW + G   +    + EM   G+  ++Y+YSI +D  C+ G+  RA  ++ EM + G
Sbjct: 324 ILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKG 383

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
              + + +N ++R    +   +  ++V+ +MK +GCE + +TYN +I   C++G++ +A 
Sbjct: 384 IRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAY 443

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            V + M  KG  PN  T++  F CI K   +    R + +M +    P   TY +LM+ F
Sbjct: 444 GVFDQMREKGYAPNVITYHCFFGCIEKPKQI---LRTFDRMINSGVRPRMDTYVMLMKKF 500

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
                   V  + K+MEE    P+   Y  LI      G  + A KY  EM+
Sbjct: 501 GRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEML 552



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 103/238 (43%), Gaps = 33/238 (13%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V  ++I++R + + G   +    +  M+  G      ++SI + I C+  +   A   + 
Sbjct: 318 VKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYK 377

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +K K    DV+ Y  ++R    +  +  + RVFREMK  G +PNV TY+ +I  LC  G
Sbjct: 378 EMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENG 437

Query: 302 QITRAHDVFAEMLEVGCEPNSITFN--------------------------------NLM 329
           +I  A+ VF +M E G  PN IT++                                 LM
Sbjct: 438 RIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQILRTFDRMINSGVRPRMDTYVMLM 497

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +   +      V  V+ +M+  GC  D   YN LID   + G ++ A K    M+ KG
Sbjct: 498 KKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKG 555



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 13/195 (6%)

Query: 168 WHFIDL---MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           W  + L   MK + + + V  ++ ++R    +     ++  F  M+E GC P+ + ++ +
Sbjct: 370 WRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTI 429

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE---RVFREMKM 280
           I +LC   R  EA   FD +++K + P+VI Y       C  G I + +   R F  M  
Sbjct: 430 IKLLCENGRIREAYGVFDQMREKGYAPNVITYH------CFFGCIEKPKQILRTFDRMIN 483

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           +G++P + TY +++    R G +     V+ +M E GC P++  +N L+   V+    + 
Sbjct: 484 SGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDL 543

Query: 341 VLQVYNQMKRLGCEA 355
             +   +M   G  A
Sbjct: 544 ARKYEEEMLAKGLSA 558



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 40/245 (16%)

Query: 289 TYSIVIDALCRCGQITRAHDVF-AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
           +YS +IDALC    +  A ++F  E  ++    +   +N ++R   K    +K  + + +
Sbjct: 284 SYSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCREFWEE 343

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M R G      +Y+  +D  CK GK   A+K+   M +KG                    
Sbjct: 344 MDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGI------------------- 384

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
                             + V YN +++    S+  D  +++ +EM+E   EPNV TY  
Sbjct: 385 ----------------RLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNT 428

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I + C  G    AY    +M  EK   P    Y      + +  Q+ +     ++M++ 
Sbjct: 429 IIKLLCENGRIREAYGVFDQM-REKGYAPNVITYHCFFGCIEKPKQILR---TFDRMINS 484

Query: 528 GFTAR 532
           G   R
Sbjct: 485 GVRPR 489


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 183/363 (50%), Gaps = 18/363 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y ++I       + + A+     MK   +   V  ++ L+  + +AG   +A 
Sbjct: 218 FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
           + F+ ME  GCAP+ + ++ +I    + R+ S+A   ++ +  K   P+++ YT L+ G 
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 263 CRAGNISEAERVFREMKMAGIQ-----------------PNVYTYSIVIDALCRCGQITR 305
           C+AG I +A ++++ MK   ++                 PNV+TY  ++D LC+  Q+  
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A D+   M   GCEPN + ++ L+    KA + ++  +V+  M   G + +  TY+ LID
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID 457

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              KD +L+ A+KVL+ M+   C PN   +  +   + K+G  + A+++   M++  C P
Sbjct: 458 RLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N VTY  ++  F  S   +  L+L ++M      PN  TYR+LI   C  G  + A+K +
Sbjct: 518 NVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577

Query: 486 REM 488
            EM
Sbjct: 578 EEM 580



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 189/439 (43%), Gaps = 34/439 (7%)

Query: 114 HVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDL 173
           H + KS   R  + LL+          + EFV    LY +MI+   +   F+ A  F+  
Sbjct: 18  HSLCKSGKWREALSLLE----------KEEFVPDTVLYTKMISGLCEASLFEEAMDFLTR 67

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M++ +    V T+ IL+   +            + M   GC P    F+ ++   CR   
Sbjct: 68  MRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGD 127

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN-----ISEAERVFREMKMAGIQPNV 287
            + A      + +   +P  +VY  L+ G C +       +  AE+ + EM  AG+  N 
Sbjct: 128 YAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNK 187

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
              S     LC  G+  +A++V  EM+  G  P++ T++ ++     AS+ EK  Q++ +
Sbjct: 188 VNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQE 247

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           MKR G   D   Y  LID  CK G +E A    + M R GC PN  T+  +     K   
Sbjct: 248 MKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRK 307

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV--------- 458
           V+ A+ +Y  M    C PN VTY  L+     +   +   ++ K M++  V         
Sbjct: 308 VSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF 367

Query: 459 --------EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
                   EPNV TY  L+   C       A   ++ M  E C +P   VY+ ++    +
Sbjct: 368 RVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC-EPNHVVYDALIDGCCK 426

Query: 511 AGQLQKHEELVEKMVDRGF 529
           AG+L + +E+   M++ G+
Sbjct: 427 AGKLDEAQEVFTTMLECGY 445



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 84/255 (32%), Gaps = 73/255 (28%)

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKL--------------------------------ED 375
           M  +G   D  T        CK GK                                 E+
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEE 60

Query: 376 AIKVLNSMVRKGCNPNASTFNMIF----------RCISKL-------------------- 405
           A+  L  M    C PN  T+ ++           RC   L                    
Sbjct: 61  AMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVH 120

Query: 406 -----GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS-----TDMVLKLKKEMEE 455
                GD   A+++  KM    C+P  V YNIL+    +S+       D+  K   EM E
Sbjct: 121 AYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLE 180

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             V  N           CG+G +  AY  IREM+  K   P +S Y  V+  L  A +++
Sbjct: 181 AGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMM-SKGFIPDTSTYSKVIGYLCNASKVE 239

Query: 516 KHEELVEKMVDRGFT 530
           K  +L ++M   G  
Sbjct: 240 KAFQLFQEMKRNGIA 254


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 190/372 (51%), Gaps = 5/372 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+++   A    + M  R  E  V +++ ++    + G  + AV  F +ME+ GC PD 
Sbjct: 172 GKIKE---AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDV 228

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ +I  LC+ R  ++A  F   + D+   P+V  Y  +V G+C  G ++EA R+F+E
Sbjct: 229 VTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKE 288

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    + P+  T +I++D LC+ G ++ A  VF  M E G EPN  T+N LM  +     
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRL 348

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             +  +V+  M R GC     +YN LI+  CK  ++++A  +L  M  K  NP+  T++ 
Sbjct: 349 MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           + + + + G    A  ++ +M      PN VTY+IL+  F      D  LKL K M+E +
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +EPN+  + ILI      G    A +   ++  +  ++P    Y ++++ L + G   + 
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADG-IRPTIRTYTVMIKGLLKEGLSDEA 527

Query: 518 EELVEKMVDRGF 529
            +L  KM D GF
Sbjct: 528 YDLFRKMEDDGF 539



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 179/362 (49%), Gaps = 38/362 (10%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+   K R  + A  F+  M  R +   V T++ +V  +   G   EA   
Sbjct: 226 PDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRL 285

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M      PD +  +I++  LC++   SEA+  F+++ +K  EP++  Y  L+ G+C 
Sbjct: 286 FKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCL 345

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              ++EA++VF  M   G  P V++Y+I+I+  C+  ++  A  + AEM      P+++T
Sbjct: 346 QRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVT 405

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ LM+   +  R ++ L ++ +M   G   + +TY+ L+D  CK G L++A+K+L SM 
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465

Query: 385 RK-----------------------------------GCNPNASTFNMIFRCISKLGDVN 409
            K                                   G  P   T+ ++ + + K G  +
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSD 525

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A+ ++ KM+D    PN+ +YN+++Q F  ++ +   ++L  EM       N++T+++L+
Sbjct: 526 EAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585

Query: 470 TM 471
            +
Sbjct: 586 DL 587



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 162/331 (48%), Gaps = 4/331 (1%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYT--NL 258
           +A+ +F RM      P    F   +    +K++ S   S  + + D F     VY+   L
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQM-DLFGVTHNVYSLNVL 129

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +   CR  ++  A  +  +M   GI P   T++ +I+ LC  G+I  A ++F EM+  G 
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           EPN I++N ++    K   T   + V+ +M++ GC+ D +TYN +ID  CKD  + DA++
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAME 249

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            L+ M+ +G  PN  T+N +      LG +N A R++ +M      P+TVT  IL+    
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
                     + + M E  VEPN++TY  L+  YC     N A K    MI + C  PG 
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGC-APGV 368

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             Y +++    ++ ++ + + L+ +M  +  
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 164/349 (46%), Gaps = 2/349 (0%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           +V  F   +  + +    +  V   N+M+ +G   +  + +++I+ LCR      A S  
Sbjct: 87  SVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSIL 146

Query: 242 DSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             + K    P    +  L+ G C  G I EA  +F EM   G +PNV +Y+ +I+ LC+ 
Sbjct: 147 GKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKT 206

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G  + A DVF +M + GC+P+ +T+N ++    K       ++  ++M   G   +  TY
Sbjct: 207 GNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTY 266

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N ++   C  G+L +A ++   MV +   P+  T  ++   + K G V+ A  ++  M +
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE 326

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              EPN  TYN LM  +   +  +   K+ + M      P V++Y ILI  +C     + 
Sbjct: 327 KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDE 386

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A   + EM   K L P +  Y  ++Q L + G+ ++   + ++M   G 
Sbjct: 387 AKSLLAEMY-HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 119/227 (52%), Gaps = 4/227 (1%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           VHS   Y+ +IN   K R+ D A   +  M  + +     T+S L++   + G   EA++
Sbjct: 368 VHS---YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALN 424

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F  M  YG  P+ + +SI++   C+     EA     S+++K  EP+++ +T L+ G  
Sbjct: 425 IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMF 484

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AG +  A+ +F ++   GI+P + TY+++I  L + G    A+D+F +M + G  PNS 
Sbjct: 485 IAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 544

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           ++N +++  ++   +   +++ ++M      A+  T+  L+D   +D
Sbjct: 545 SYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQD 591


>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
 gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 233/521 (44%), Gaps = 66/521 (12%)

Query: 8   HRLPFSLSQQIPKAYSF----FSSLAPLNE-DDDGDCVTNPNSSPDTPFLSPEETLISEK 62
           +R+  S+    P ++ F    FSSL+P +     G  +    S PD P            
Sbjct: 11  YRILHSIQHNHPSSFRFSALQFSSLSPHSWLSTPGKPLVKWPSLPDQP------------ 58

Query: 63  FHSLIKDHHRKNPNPS-----SNSNPSLNPDFTI---PSLSLGFSQISTAHSISPSTVRH 114
                      NP PS     SN N +++  F     P+     S I +  S+ P     
Sbjct: 59  ----------ANPLPSNSAVISNPNSAIDVKFEASYSPNDLSTISSILSDRSVRPGAALE 108

Query: 115 VIEKSCGVRHGIPLLQVL------------SFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
                 G+     LL+ +            S F W   +  F  S  L++ +IN+  K R
Sbjct: 109 DALDRTGIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSR 168

Query: 163 QFDLAWHFIDLMKSRNVE----ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           +FD AW  I   + R  E    ++V+ F IL+RRY RAG+   A+  +    E+ C  + 
Sbjct: 169 EFDSAWSLIT-SRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTY----EFACNLET 223

Query: 219 IA-------FSIVISILCRKRRASEAQSFFD---SLKDKFEPDVIVYTNLVRGWCRAGNI 268
           I+       F I++  LC++     A  +F+    +   FEP +  Y  L+ GW R+  +
Sbjct: 224 ISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKL 283

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A+R++ EMK   I P V TY  +I+  CR   +  A ++  EM   G EPN+I +N +
Sbjct: 284 KHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPI 343

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +A R ++ L +  +   L       TYN L+  +CK G L  A K+L  M+ +G 
Sbjct: 344 VDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGF 403

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P  +T+N  FR  SK G +  +  +Y KM +    P+ +TY++L++M    +  ++ ++
Sbjct: 404 TPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQ 463

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +  EM+    + ++ T  +L+ + C M  +  A+     MI
Sbjct: 464 VCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMI 504



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 1/246 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   + R+   A      MK   +  TV T+  L+  Y R      A+   + M 
Sbjct: 270 YNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMR 329

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNIS 269
             G  P+ I ++ ++  L    R  EA    +      + P +  Y +LV+G+C+AG++S
Sbjct: 330 REGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLS 389

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++ + M   G  P   TY+       + G+I  +  ++ +M+E G  P+ +T++ L+
Sbjct: 390 GASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLL 449

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           ++  +  R    +QV N+MK  G + D  T   L+   CK  K E+A      M+ +G  
Sbjct: 450 KMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIV 509

Query: 390 PNASTF 395
           P   TF
Sbjct: 510 PQYLTF 515



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 1/277 (0%)

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           + E ++  ++IL+  + R+     A   +  M++   +P  + +  +I   CR R    A
Sbjct: 262 SFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIA 321

Query: 238 QSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
               D ++ +  EP+ IVY  +V     AG   EA  +     +    P + TY+ ++  
Sbjct: 322 IELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKG 381

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            C+ G ++ A  +   M+  G  P   T+N   R   K  + E+ + +YN+M   G   D
Sbjct: 382 YCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPD 441

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            +TY+ L+   C++ +L  A++V N M  +G + + +T  M+   + K+     A   + 
Sbjct: 442 KLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFE 501

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            M      P  +T+  L   F     T M  KL++ M
Sbjct: 502 HMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMM 538



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 143/326 (43%), Gaps = 10/326 (3%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSL----KDKFEPDVIVYTNLVRGWCRAGNI 268
           G  P    F+ +I++L + R    A S   S     ++ F   V V+  L+R + RAG +
Sbjct: 149 GFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMV 208

Query: 269 SEAERVFR---EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC--EPNSI 323
             A R +     ++      +   + I++D+LC+ G +  A + F    E+G   EP+  
Sbjct: 209 QPAIRTYEFACNLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIR 268

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +N L+    ++ + +   +++ +MK+       +TY  LI+ +C+   +E AI++++ M
Sbjct: 269 AYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEM 328

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            R+G  PNA  +N I   + + G    A  M  +   L+  P   TYN L++ +  +   
Sbjct: 329 RREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDL 388

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
               K+ K M      P   TY      +   G    +     +MIE     P    Y +
Sbjct: 389 SGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESG-YAPDKLTYHL 447

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           +L+ L    +L    ++  +M  RGF
Sbjct: 448 LLKMLCEEERLNLAVQVCNEMKARGF 473



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 19/268 (7%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT---FNNLMRVHVKA 335
           K +G +P+   ++ +I+ L +  +   A  +    L  G E   ++   F  L+R + +A
Sbjct: 146 KKSGFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARA 205

Query: 336 SRTEKVLQVYNQMKRLGCEADTIT-------YNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
              +  ++ Y       C  +TI+       +  L+D  CK+G +  A +  N     G 
Sbjct: 206 GMVQPAIRTYE----FACNLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGS 261

Query: 389 N--PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           +  P+   +N++     +   +  A R++ +MK  K  P  VTY  L++ +   +S ++ 
Sbjct: 262 SFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIA 321

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI-REMIEEKCLKPGSSVYEMVL 505
           ++L  EM    +EPN   Y  ++      G +  A   + R M+ E+   P  S Y  ++
Sbjct: 322 IELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQ--GPTISTYNSLV 379

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +   +AG L    ++++ M+ RGFT  P
Sbjct: 380 KGYCKAGDLSGASKILKMMIGRGFTPTP 407


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 224/483 (46%), Gaps = 57/483 (11%)

Query: 95  SLG-FSQISTAHS---ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD- 149
           +LG + Q++ AH    ++ + + H + K+  +R  + +LQ       V+AR    H PD 
Sbjct: 24  ALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQ-----EMVSAR----HVPDN 74

Query: 150 ----LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
               +  + + L  +V   D A   ++ M  R +     T+S LV    +     EAV  
Sbjct: 75  TTLTVVVQSLCLGDRV---DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 131

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
              M E GCAP  + ++ +I+  CR RR  EA  F + +  +   PD+I YT L+ G+C+
Sbjct: 132 VETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCK 191

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE------------ 312
           + ++     +  E+   G  P++ TYS VID LC+ G++  A D+F E            
Sbjct: 192 SRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNS 251

Query: 313 --------------------MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
                               M++  C P+ +T+  LM    K  R +   +++ QM    
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D +T+  L+D  C +G++EDA+++L  + R+GC P   T+N +     K   V  A 
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAE 371

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM--EENEVEPNVNTYRILIT 470
            +    +     PNTVTYNIL+     +  TD  L+   ++  E      +V  Y I++ 
Sbjct: 372 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 431

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             C  G  ++A ++  EMI+   + P ++ +  V+  L +A Q Q+  EL+E+M+  G T
Sbjct: 432 ALCRDGRTDDAVQFYEEMIQRGYV-PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 490

Query: 531 ARP 533
             P
Sbjct: 491 PGP 493



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 160/384 (41%), Gaps = 74/384 (19%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           P  +  ++VI  LCR  R   A   +  + D   PD + YT LV G  +A  + +A +V 
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVL 62

Query: 276 REMKMA-----------------------------------GIQPNVYTYSIVIDALCRC 300
           +EM  A                                   G+  N  TYS ++D LC+C
Sbjct: 63  QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC 122

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            ++  A  +   M E GC P  +T+N+++    +A R ++      QM   GC  D ITY
Sbjct: 123 ERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITY 182

Query: 361 NFL-----------------------------------IDCHCKDGKLEDAIKVLNSMVR 385
             L                                   ID  CK G+L DA+ +   M  
Sbjct: 183 TALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM-- 240

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
             C P A T+N +     + GD++ A R+ GKM D KC P+ VTY  LM  F      D 
Sbjct: 241 -SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDD 299

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             +L ++M  N++ P+V T+  L+   CG G   +A + + E+    C  P    Y  V+
Sbjct: 300 AYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC-PPTIYTYNCVV 358

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
               +A Q++K EELV     RGF
Sbjct: 359 DGYCKANQVRKAEELVADFRSRGF 382



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 161/330 (48%), Gaps = 17/330 (5%)

Query: 132 LSFFNWVTARPEFVHSPDL--YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           L     VT R     +PD+  Y  +I+    AG++R        +D+ +  +   T  T+
Sbjct: 199 LELLGEVTRRG---FTPDIVTYSTVIDGLCKAGRLRDA------VDIFEEMSCAPTAITY 249

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-K 245
           + L+  Y RAG   EA+    +M +  CAPD + ++ ++S  C+  R  +A   F  +  
Sbjct: 250 NSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVA 309

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           +K  PDV+ +T+LV G C  G + +A  +  E+   G  P +YTY+ V+D  C+  Q+ +
Sbjct: 310 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRK 369

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG--CEADTITYNFL 363
           A ++ A+    G  PN++T+N L+    +A RT++ LQ  +Q+   G  C      Y  +
Sbjct: 370 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 429

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D  C+DG+ +DA++    M+++G  P A+TF  +   + K      AH +  +M     
Sbjct: 430 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGH 489

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            P   T + ++  +  +       +L  E+
Sbjct: 490 TPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 40/279 (14%)

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           + P    +++VI  LCR G++  A  V+ +M +    P+ +T+  L+    KA R    +
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59

Query: 343 QVYNQMKRL-----------------------------------GCEADTITYNFLIDCH 367
           QV  +M                                      G  A+ ITY+ L+D  
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK  +L++A+ ++ +M  +GC P   T+N I     +   V+ AH    +M    C P+ 
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           +TY  L+  F  S+     L+L  E+      P++ TY  +I   C  G   +A     +
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV----D 235

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           + EE    P +  Y  ++    RAG + +   L+ KMVD
Sbjct: 236 IFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 102/209 (48%), Gaps = 7/209 (3%)

Query: 147 SPDL--YHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           SPD+  +  +++ L G+ R  D A   ++ +  R    T+ T++ +V  Y +A    +A 
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMED-ALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAE 371

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP---DVIVYTNLVR 260
                    G  P+ + ++I+++  CR  R  +A  + D L  +  P    V +Y  ++ 
Sbjct: 372 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 431

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
             CR G   +A + + EM   G  P   T++ V+ ALC+  Q  +AH++  EM++ G  P
Sbjct: 432 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 491

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMK 349
              T + ++  + +A   +K  ++ ++++
Sbjct: 492 GPGTCDAVVSAYCRAGMIQKADELASELR 520



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 3/140 (2%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN--VEITVDTFSILVRRYVRAGLAAE 201
           FV +   Y+ ++    +  + D A  ++D + S       +V  ++I++    R G   +
Sbjct: 382 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 441

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
           AV  +  M + G  P    F+ V+  LC+  +  +A    + + K    P       +V 
Sbjct: 442 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 501

Query: 261 GWCRAGNISEAERVFREMKM 280
            +CRAG I +A+ +  E+++
Sbjct: 502 AYCRAGMIQKADELASELRL 521


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 59/501 (11%)

Query: 86  NPDFTIPSLSLGFSQISTAHS----ISPS-TVRHVIEKSCGVRHGIPLLQVLSFFNWVTA 140
           +P  T  S ++  S     HS    I PS T  H+I+      H +    +LSFF W++ 
Sbjct: 36  DPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLST 95

Query: 141 RPEFVHSPDLY---------HEMINLAGKVRQFDLAWH--------FIDLMKSRNVEITV 183
           +  F  S   Y         H+M++ A  + QF ++          F  ++++R    + 
Sbjct: 96  QHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSN 155

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEY------------------------------- 212
             FS+L+  Y  +G  ++A+  F  + ++                               
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 213 ----GCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
               G  PD   F++++  LC++ + +EAQ  F  + K    P V+ +  L+ G+C++GN
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +  R+ R M    + P+V+TYS++I+ LC+ GQ+  A+ +F EM + G  PN +TF  
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+  H    R +  +++Y QM R G + D ITYN LI+  CK G L +A K++  M ++G
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T+ M+     K GD+  A  +  +M     E + V +  L+  F          
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +  +EM E  ++P+  TY ++I  +C  G     +K ++EM  +  + PG   Y ++L  
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHV-PGVVTYNVLLNG 514

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
           L + GQ++    L++ M++ G
Sbjct: 515 LCKQGQMKNANMLLDAMLNLG 535



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 1/286 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K    D  +     M    V   V T+S+L+    + G   +A   F  M 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ + F+ +I+  C   RA      +   L+   +PDVI Y  L+ G C+ G++ 
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+++  EM   G++P+ +TY+++ID  C+ G +  A ++  EM++ G E +++ F  L+
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  +  +  +   +M   G + D  TY  +I   CK G ++   K+L  M   G  
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHV 502

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           P   T+N++   + K G +  A+ +   M +L   P+ +TYNIL++
Sbjct: 503 PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 12/203 (5%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   KV     A   +  M  R ++    T+++L+    + G    A+  
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCR 264
              M + G   D +AF+ +IS  CR+ +  EA+ +  + L+   +PD   YT ++ G+C+
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++    ++ +EM+  G  P V TY+++++ LC+ GQ+  A+ +   ML +G  P+ IT
Sbjct: 483 KGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDIT 542

Query: 325 FNNLMRVHVKASRTEKVLQVYNQ 347
           +N L+         E+ LQ + Q
Sbjct: 543 YNILL---------ERTLQAWKQ 556


>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
 gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
          Length = 507

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 231/489 (47%), Gaps = 19/489 (3%)

Query: 45  SSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTA 104
           SS   PFLS          H+  ++H+ K+    +  N   N   +  S +L  S  ST 
Sbjct: 20  SSSKIPFLS---------LHTNPQNHNNKDIQVDAIYNIISN---STSSQNLKQSLKSTG 67

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
             +S   +  V+ K     HG PL Q L FFN+   R  F HS      M+ + G+ R+F
Sbjct: 68  VFLSNDLIDKVL-KRVRFSHGNPL-QALDFFNFTADRRGFYHSSYSLDTMLYILGRSRKF 125

Query: 165 DLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           D  W   ID+ +     IT  T  +++ R  +       V +F + +      D   F+ 
Sbjct: 126 DHIWDVLIDIKRKDRNLITPRTLQVVLGRVAKVCSVRMTVESFWKFKRLVPVFDTSCFNA 185

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           ++  LC+++  S+A++ +  LK  F P++  +  L+ GW  +    EAE  + EMK  G+
Sbjct: 186 LLRTLCQEKSMSDARNVYHHLKKGFRPNLQTFNILLSGWKSS---EEAELFYEEMKELGV 242

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P++ TY+ +ID  C+  ++ +A+ V A M E    P+ IT+ +++       + +K   
Sbjct: 243 KPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQPDKARD 302

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           +  +MK  GC  D   YN +I  +C   +L+ A  ++  M  KG +PNA+++N+ FR  S
Sbjct: 303 MLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFS 362

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
              D+  +   YG+M D  C PNT +   L+++F   +  +M L+L  +M E      + 
Sbjct: 363 WSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKGFGSYIL 422

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
              +L+ M C MG    A K   +M+ EK  KP +  +  +   +  A +      L EK
Sbjct: 423 VSDVLLGMLCDMGKLVEAEKCFLQMV-EKGHKPSNVSFRRIKVLMELANKHDAIRNLSEK 481

Query: 524 MVDRGFTAR 532
           M   G + R
Sbjct: 482 MAIFGSSIR 490


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 196/458 (42%), Gaps = 70/458 (15%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           L  VL FF+ +     F H+   Y  MI   G+  + D+  + +  MK   +    D F 
Sbjct: 54  LSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFI 113

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCA-------------------------------- 215
            ++  Y R G A +A+  F R+ E+GC                                 
Sbjct: 114 CIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKD 173

Query: 216 ---PDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------------- 247
              P+   ++I++  LC+  R   A   F  + +K                         
Sbjct: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA 233

Query: 248 ------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
                 F+P V VY  L+ G C+ G I  A ++  EM   G+ PNV +YS +I++LC  G
Sbjct: 234 RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A  +FA+M   GC+ N  TF  L++      +  + L ++  M + GCE + + YN
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C +G LE+A++V + M R GC PN +T++++    +K GD+ GA   + +M   
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C PN VTY  ++ +   +   D    L ++M      PN  T+   I   CG G    A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWA 473

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            K +  M    CL P  + Y  +L  L R   + K+EE
Sbjct: 474 MKLLERMQGHGCL-PNITTYNELLDALFR---MNKYEE 507



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 184/387 (47%), Gaps = 1/387 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S  +Y+ +I+   K  + ++A   +  M    V+  V ++S ++     +G    A 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGW 262
             F +M   GC  +   F+ +I     + +  EA   +   ++D  EP+V+ Y  L+ G 
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G++ EA +V  +M+ +G  PNV TYSI+ID   + G +  A + +  M+  GC PN 
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+  ++ V  K S  ++   +  +M   GC  +T+T+N  I   C +G++E A+K+L  
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLER 479

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC PN +T+N +   + ++     A  ++ +++    +PN VTYN ++  F+ +  
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
               L+L  +       P+  TY  +I  YC  G    A + +  +   K   P    Y 
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++        +++    ++K +++G 
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGI 626



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 38/284 (13%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M+       V T+SIL+  + ++G    A   +NRM  +GC P+ + ++ ++ 
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427

Query: 227 ILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
           +LC+     +A S  + +  +   P+ + +   ++G C  G +  A ++   M+  G  P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N+ TY+ ++DAL R  +   A  +F E+     +PN +T+N ++    +A    + LQ++
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGK--------------------------------- 372
            +    G   D+ITYN +I  +CK GK                                 
Sbjct: 548 GKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACN 607

Query: 373 ---LEDAIKVLNSMVRKGCNPNASTFNMIFRC-ISKLGDVNGAH 412
              +E+A+  L+  + +G  PN +T+N + RC    LG +   H
Sbjct: 608 WMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIH 651



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 8/309 (2%)

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           S V+  L   R  S    FF ++ +   F+     Y  ++    R   +   + + ++MK
Sbjct: 42  SDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
           M GI      +  +I+   R G   +A  +F  + E GC+P    +N+L+   +  ++ +
Sbjct: 102 MDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQ 161

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
            +  +Y  MK+ G   +  TYN L+   CK+ +++ A K+   M  KGC P+A T+  + 
Sbjct: 162 MINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMV 221

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + K G ++ A  + G+ K     P+   YN L+         ++ +KL  EM +N V+
Sbjct: 222 SSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVD 276

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           PNV +Y  +I   C  G+   A+    +M    C       +  +++     G+L +  +
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC-DANIHTFTPLIKGCFMRGKLYEALD 335

Query: 520 LVEKMVDRG 528
           L + M+  G
Sbjct: 336 LWKLMIQDG 344



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+++   ++ +++ A+     +++RN++  + T++ ++  + RAG+  EA+  F +  
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKAL 551

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVRGWCRAGNI 268
             G APD I ++ +I   C++ +   A    + +    ++ PD+I YT+L+ G C   NI
Sbjct: 552 VRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNI 611

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            EA     +    GI PN  T+    +AL RC
Sbjct: 612 EEAMAFLDKAINQGICPNFATW----NALVRC 639


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 210/405 (51%), Gaps = 9/405 (2%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           LQVL   N     P+ V    +   + + +GK++Q   A   +D    +     V T++I
Sbjct: 147 LQVLDRMN---VAPDVVTYNTILRTLCD-SGKLKQ---AMEVLDRQLQKECYPDVITYTI 199

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           L+    +     +A+   + M   G  PD + ++++I+ +C++ R  EA  F +++    
Sbjct: 200 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            +P+VI +  ++R  C  G   +AE++  +M   G  P+V T++I+I+ LCR G + RA 
Sbjct: 260 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 319

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           D+  +M   GC PNS+++N L+    K  + ++ ++  + M   GC  D +TYN L+   
Sbjct: 320 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 379

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CKDGK++ A+++LN +  KGC+P   T+N +   +SK+G    A ++  +M+    +P+ 
Sbjct: 380 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 439

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           +TY+ L+   +     D  +K   ++E   + PN  TY  ++   C     + A  ++  
Sbjct: 440 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 499

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           MI ++C KP  + Y ++++ +   G  ++  +L+ ++  RG   +
Sbjct: 500 MISKRC-KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 543



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 181/367 (49%), Gaps = 3/367 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + +  + F++ M  R     +   + L+R + R G   +A      +E+ G  PD I ++
Sbjct: 72  ELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYN 131

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++IS  C+      A    D +     PDV+ Y  ++R  C +G + +A  V        
Sbjct: 132 VLISGYCKSGEIDNALQVLDRMN--VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 189

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P+V TY+I+I+A C+   + +A  +  EM   G +P+ +T+N L+    K  R ++ +
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 249

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +  N M   GC+ + IT+N ++   C  G+  DA K+L+ M+RKGC+P+  TFN++   +
Sbjct: 250 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 309

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            + G +  A  +  KM    C PN+++YN L+  F   K  D  ++    M      P++
Sbjct: 310 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 369

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  L+T  C  G  + A + + ++  + C  P    Y  V+  L + G+ ++  +L++
Sbjct: 370 VTYNTLLTALCKDGKVDVAVEILNQLSSKGC-SPVLITYNTVIDGLSKVGKTERAIKLLD 428

Query: 523 KMVDRGF 529
           +M  +G 
Sbjct: 429 EMRRKGL 435



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 3/355 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I    K      A   +D M+++  +  V T+++L+    + G   EA+  
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
            N M  YGC P+ I  +I++  +C   R  +A+    D L+    P V+ +  L+   CR
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  +  +M M G  PN  +Y+ ++   C+  ++ RA +    M+  GC P+ +T
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K  + +  +++ NQ+   GC    ITYN +ID   K GK E AIK+L+ M 
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           RKG  P+  T++ +   +S+ G V+ A + +  ++ L   PN +TYN +M     S+ TD
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 491

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
             +     M     +P   TY ILI      G    A   + E+     +K  S+
Sbjct: 492 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 546


>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 203/396 (51%), Gaps = 8/396 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR----NVEITVDTFSIL 189
           FF W  + P F HS   +H ++ + G+ +QF + W F  L+++R    + +IT + F I+
Sbjct: 93  FFLWAKSIPGFQHSVQSFHILVEILGRSKQFAILWDF--LIETRESDSSCKITNEIFWII 150

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
              Y RA L   A+ +F RM+E+G  P  I   +++  LC+K+   +AQ FFD +K  F 
Sbjct: 151 FTAYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFL 210

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
                Y+ L+ GW + G+  +A  +F  M   G   ++  Y+ +++ALC+ G +  A D 
Sbjct: 211 LTTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDF 270

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +ML    EP++ T++  +R +  A+       V ++M+R     +  TYN +I   CK
Sbjct: 271 LNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCK 330

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             K+E+A ++L+ M+  G  P+  ++N I        +VN A ++  +M+   C P+  T
Sbjct: 331 IKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHT 390

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC-GMGHWNNAYKYIREM 488
           YN+++++       D   ++ + M + +  P+V+TY ++I   C   G    A KY   M
Sbjct: 391 YNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMM 450

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           I+E  + P  +  EM+  +L   G L   E L  KM
Sbjct: 451 IDEG-IPPYDTTIEMLRNRLLGLGLLDNIEILAAKM 485


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 231/499 (46%), Gaps = 79/499 (15%)

Query: 83  PSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARP 142
           PSL P+  I  ++L        HS+SP ++                   LSFF W++ + 
Sbjct: 63  PSLTPNHLIDLINL------NPHSLSPPSL-------------------LSFFKWLSTQH 97

Query: 143 EFVHSPDLY---------HEMINLAGKVRQFDLAWH--------FIDLMKSRNVEITVDT 185
            F  S   Y         H+M++ A  + QF ++          F  ++++R    +   
Sbjct: 98  HFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLV 157

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEY--------------------------------- 212
           FS+L+  Y  +G  ++A+  F  + ++                                 
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 213 --GCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   F++++  LC++ + +EAQ  F  + K    P V+ +  L+ G+C++GN+ 
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +  R+ R M    + P+V+TYS++I+ LC+ GQ+  A+ +F EM + G  PN +TF  L+
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H    R +  +++Y QM R G + D ITYN LI+  CK G L +A K++  M ++G  
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+ M+     K GD+  A  +  +M     E + V +  L+  F          + 
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERT 457

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +EM E  ++P+  TY ++I  +C  G     +K ++EM  +  + PG   Y ++L  L 
Sbjct: 458 LREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHV-PGVVTYNVLLNGLC 516

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + GQ++    L++ M++ G
Sbjct: 517 KQGQMKNANMLLDAMLNLG 535



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 1/286 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K    D  +     M    V   V T+S+L+    + G   +A   F  M 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ + F+ +I+  C   RA      +   L+   +PDVI Y  L+ G C+ G++ 
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+++  EM   G++P+ +TY+++ID  C+ G +  A ++  EM++ G E +++ F  L+
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  +  +  +   +M   G + D  TY  +I   CK G ++   K+L  M   G  
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHV 502

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           P   T+N++   + K G +  A+ +   M +L   P+ +TYNIL++
Sbjct: 503 PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 210/405 (51%), Gaps = 9/405 (2%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           LQVL   N     P+ V    +   + + +GK++Q   A   +D    +     V T++I
Sbjct: 204 LQVLDRMN---VAPDVVTYNTILRTLCD-SGKLKQ---AMEVLDRQLQKECYPDVITYTI 256

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           L+    +     +A+   + M   G  PD + ++++I+ +C++ R  EA  F +++    
Sbjct: 257 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            +P+VI +  ++R  C  G   +AE++  +M   G  P+V T++I+I+ LCR G + RA 
Sbjct: 317 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 376

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           D+  +M   GC PNS+++N L+    K  + ++ ++  + M   GC  D +TYN L+   
Sbjct: 377 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 436

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CKDGK++ A+++LN +  KGC+P   T+N +   +SK+G    A ++  +M+    +P+ 
Sbjct: 437 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 496

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           +TY+ L+   +     D  +K   ++E   + PN  TY  ++   C     + A  ++  
Sbjct: 497 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 556

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           MI ++C KP  + Y ++++ +   G  ++  +L+ ++  RG   +
Sbjct: 557 MISKRC-KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 600



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 181/367 (49%), Gaps = 3/367 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + +  + F++ M  R     +   + L+R + R G   +A      +E+ G  PD I ++
Sbjct: 129 ELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYN 188

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++IS  C+      A    D +     PDV+ Y  ++R  C +G + +A  V        
Sbjct: 189 VLISGYCKSGEIDNALQVLDRMN--VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 246

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P+V TY+I+I+A C+   + +A  +  EM   G +P+ +T+N L+    K  R ++ +
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 306

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +  N M   GC+ + IT+N ++   C  G+  DA K+L+ M+RKGC+P+  TFN++   +
Sbjct: 307 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 366

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            + G +  A  +  KM    C PN+++YN L+  F   K  D  ++    M      P++
Sbjct: 367 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 426

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  L+T  C  G  + A + + ++  + C  P    Y  V+  L + G+ ++  +L++
Sbjct: 427 VTYNTLLTALCKDGKVDVAVEILNQLSSKGC-SPVLITYNTVIDGLSKVGKTERAIKLLD 485

Query: 523 KMVDRGF 529
           +M  +G 
Sbjct: 486 EMRRKGL 492



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 3/355 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I    K      A   +D M+++  +  V T+++L+    + G   EA+  
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
            N M  YGC P+ I  +I++  +C   R  +A+    D L+    P V+ +  L+   CR
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  +  +M M G  PN  +Y+ ++   C+  ++ RA +    M+  GC P+ +T
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K  + +  +++ NQ+   GC    ITYN +ID   K GK E AIK+L+ M 
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           RKG  P+  T++ +   +S+ G V+ A + +  ++ L   PN +TYN +M     S+ TD
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
             +     M     +P   TY ILI      G    A   + E+     +K  S+
Sbjct: 549 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 603


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 196/458 (42%), Gaps = 70/458 (15%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           L  VL FF+ +     F H+   Y  MI   G+  + D+  + +  MK   +    D F 
Sbjct: 54  LSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFI 113

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCA-------------------------------- 215
            ++  Y R G A +A+  F R+ E+GC                                 
Sbjct: 114 CIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKD 173

Query: 216 ---PDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------------- 247
              P+   ++I++  LC+  R   A   F  + +K                         
Sbjct: 174 GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA 233

Query: 248 ------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
                 F+P V VY  L+ G C+ G I  A ++  EM   G+ PNV +YS +I++LC  G
Sbjct: 234 RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A  +FA+M   GC+ N  TF  L++      +  + L ++  M + GCE + + YN
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C +G LE+A++V + M R GC PN +T++++    +K GD+ GA   + +M   
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C PN VTY  ++ +   +   D    L ++M      PN  T+   I   CG G    A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            K +  M    CL P  + Y  +L  L R   + K+EE
Sbjct: 474 MKLLERMQGHGCL-PNITTYNELLDALFR---MNKYEE 507



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 184/387 (47%), Gaps = 1/387 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S  +Y+ +I+   K  + ++A   +  M    V+  V ++S ++     +G    A 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGW 262
             F +M   GC  +   F+ +I     + +  EA   +   ++D  EP+V+ Y  L+ G 
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G++ EA +V  +M+ +G  PNV TYSI+ID   + G +  A + +  M+  GC PN 
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+  ++ V  K S  ++   +  +M   GC  +TIT+N  I   C +G++E A+K+L  
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLER 479

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC PN +T+N +   + ++     A  ++ +++    +PN VTYN ++  F+ +  
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
               L+L  +       P+  TY  +I  YC  G    A + +  +   K   P    Y 
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++        +++    ++K +++G 
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGI 626



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 38/284 (13%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M+       V T+SIL+  + ++G    A   +NRM  +GC P+ + ++ ++ 
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427

Query: 227 ILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
           +LC+     +A S  + +  +   P+ I +   ++G C  G +  A ++   M+  G  P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N+ TY+ ++DAL R  +   A  +F E+     +PN +T+N ++    +A    + LQ++
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGK--------------------------------- 372
            +    G   D+ITYN +I  +CK GK                                 
Sbjct: 548 GKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACN 607

Query: 373 ---LEDAIKVLNSMVRKGCNPNASTFNMIFRC-ISKLGDVNGAH 412
              +E+A+  L+  + +G  PN +T+N + RC    LG +   H
Sbjct: 608 WMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIH 651



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 8/309 (2%)

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           S V+  L   R  S    FF ++ +   F+     Y  ++    R   +   + + ++MK
Sbjct: 42  SDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
           M GI      +  +I+   R G   +A  +F  + E GC+P    +N+L+   +  ++ +
Sbjct: 102 MDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQ 161

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
            +  +Y  MK+ G   +  TYN L+   CK+ +++ A K+   M  KGC P+A T+  + 
Sbjct: 162 MINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMV 221

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + K G ++ A  + G+ K     P+   YN L+         ++ +KL  EM +N V+
Sbjct: 222 SSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVD 276

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           PNV +Y  +I   C  G+   A+    +M    C       +  +++     G+L +  +
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC-DANIHTFTPLIKGCFMRGKLYEALD 335

Query: 520 LVEKMVDRG 528
           L + M+  G
Sbjct: 336 LWKLMIQDG 344



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+++   ++ +++ A+     +++RN++  + T++ ++  + RAG+  EA+  F +  
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKAL 551

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVRGWCRAGNI 268
             G APD I ++ +I   C++ +   A    + +    ++ PD+I YT+L+ G C   NI
Sbjct: 552 VRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNI 611

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            EA     +    GI PN  T+    +AL RC
Sbjct: 612 EEAMAFLDKAINQGICPNFATW----NALVRC 639


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 5/365 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  R  + +V T+++L+    ++    +A+   + M   GC P+ + ++++I+
Sbjct: 195 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 254

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            +CR+ R  +A+ F + L    F+PD + YT +++G C A    + E +F EM      P
Sbjct: 255 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 314

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  T+ +++   CR G + RA  V  +M   GC  N+   N ++    K  R +   Q  
Sbjct: 315 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 374

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M   GC  DTI+Y  ++   C+  + EDA ++L  MVRK C PN  TFN     + + 
Sbjct: 375 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 434

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  +  +M +  CE N VTYN L+  F      D  L+L   M     +PN  TY
Sbjct: 435 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITY 491

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+T  C     + A + + EM+++ C  P    + +++    + G + +  ELVE+M+
Sbjct: 492 TTLLTGLCNAERLDAAAELLAEMLQKDC-APNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550

Query: 526 DRGFT 530
           + G T
Sbjct: 551 EHGCT 555



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 183/381 (48%), Gaps = 5/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K   F  A   +D M+++     + T+++++    R G   +A    NR+ 
Sbjct: 214 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 273

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
            YG  PD ++++ V+  LC  +R  + +  F  + +K   P+ + +  LVR +CR G + 
Sbjct: 274 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVE 333

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +V  +M   G   N    +IVI+ +C+ G++  A      M   GC P++I++  ++
Sbjct: 334 RAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 393

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   +A R E   ++  +M R  C  + +T+N  I   C+ G +E A  ++  M   GC 
Sbjct: 394 KGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCE 453

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N  T+N +       G V+ A  ++  M    C+PNT+TY  L+     ++  D   +L
Sbjct: 454 VNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAEL 510

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM + +  PNV T+ +L++ +C  G  + A + + +M+E  C  P    Y  +L  + 
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC-TPNLITYNTLLDGIT 569

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           +    ++  EL+  +V  G +
Sbjct: 570 KDCNSEEALELLHGLVSNGVS 590



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 169/333 (50%), Gaps = 5/333 (1%)

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIV 254
           A  +  A    +R    G APD    + +I  LCR+ R S+A     +  +     DV  
Sbjct: 87  ATTSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFA 146

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           Y  LV G+CR G +  A R+   M +A   P+ YTY+ +I  LC  G++  A  +  +ML
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             GC+P+ +T+  L+    K++   + ++V ++M+  GC  + +TYN +I+  C++G+++
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           DA + LN +   G  P+  ++  + + +           ++ +M +  C PN VT+++L+
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           + F      +  +++ ++M  +    N     I+I   C  G  ++A++++  M    C 
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC- 382

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            P +  Y  VL+ L RA + +  +EL+++MV +
Sbjct: 383 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 415



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 167/341 (48%), Gaps = 8/341 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN   K  + D A+ F++ M S        +++ +++   RA    +A      M    
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P+++ F+  I ILC+K    +A    + + +   E +++ Y  LV G+C  G +  A 
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 476

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F  M     +PN  TY+ ++  LC   ++  A ++ AEML+  C PN +TFN L+   
Sbjct: 477 ELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +    ++ +++  QM   GC  + ITYN L+D   KD   E+A+++L+ +V  G +P+ 
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T++ I   +S+   V  A +M+  ++DL   P  V YN ++       +TD  +     
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M  N   PN  TY   IT+  G+ +  +  K  R+++ E C
Sbjct: 654 MVSNGCMPNELTY---ITLIEGLAN-EDFLKETRDLLRELC 690



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 146/306 (47%), Gaps = 4/306 (1%)

Query: 135 FNWVTARPEFVHSPDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F ++     +  SPD       L G  R  +++ A   +  M  +N      TF+  +  
Sbjct: 371 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 430

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
             + GL  +A     +M E+GC  + + ++ +++  C + R   A   F S+  K  P+ 
Sbjct: 431 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--PNT 488

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I YT L+ G C A  +  A  +  EM      PNV T+++++   C+ G +  A ++  +
Sbjct: 489 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 548

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M+E GC PN IT+N L+    K   +E+ L++ + +   G   D +TY+ +I    ++ +
Sbjct: 549 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 608

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +E+AIK+ + +   G  P A  +N I   + K  + +GA   +  M    C PN +TY  
Sbjct: 609 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 668

Query: 433 LMQMFA 438
           L++  A
Sbjct: 669 LIEGLA 674



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 39/282 (13%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PDV + T L+R  CR G  S+A RV R  + +G   +V+ Y+ ++   CR GQ+  A  +
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A M      P +                                 D  TY  +I   C 
Sbjct: 167 IASM------PVA--------------------------------PDAYTYTPIIRGLCD 188

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G++ +A+ +L+ M+ +GC P+  T+ ++   + K      A  +  +M+   C PN VT
Sbjct: 189 RGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVT 248

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN+++         D   +    +     +P+  +Y  ++   C    W +  +   EM+
Sbjct: 249 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 308

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           E+ C+ P    ++M+++   R G +++  +++E+M   G  A
Sbjct: 309 EKNCM-PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 349



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 1/204 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+     A     A      M +  CAP+ + F++++S  C+K    EA    + +
Sbjct: 490 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +    P++I Y  L+ G  +  N  EA  +   +   G+ P++ TYS +I  L R  ++
Sbjct: 550 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 609

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  + ++G  P ++ +N ++    K   T+  +  +  M   GC  + +TY  L
Sbjct: 610 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 669

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG 387
           I+    +  L++   +L  +  +G
Sbjct: 670 IEGLANEDFLKETRDLLRELCSRG 693


>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 492

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 187/375 (49%), Gaps = 5/375 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P + HSP  +   +++A ++R F+ AW  +  M+S  +  +  T +IL  RY   G    
Sbjct: 95  PSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHR 154

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           AV  F  M E+G   D  +F+ ++ ILC+  R   A     +LK +F PD + Y  L  G
Sbjct: 155 AVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANG 214

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           +C       A RV +EM   GI+P + TY+ ++    R  QI  A + + EM +  CE +
Sbjct: 215 YCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEID 274

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +++  ++    +A   +K  +V+++M + G   +  TYN LI   CK   +++A+ V  
Sbjct: 275 VVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFE 334

Query: 382 SMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
            MVR+G C+PN  TFN++ R +  +GD+  A     +M +     +  TYN++++ F  +
Sbjct: 335 EMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDA 394

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN---AYKYIREMIEEKCLKPG 497
              +  L++  +M +    PN++TY +LI+         +   A K + EM+E   L P 
Sbjct: 395 GEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFL-PR 453

Query: 498 SSVYEMVLQQLRRAG 512
              +  VL  L   G
Sbjct: 454 KFTFNRVLNGLVITG 468


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 188/388 (48%), Gaps = 2/388 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P  Y  +I L     Q   A   ++ M    V +    F+ ++  + R G  A A + F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           + M++ G A D + ++ +I+ LCR     EA+     ++DK  + D + YT L+ G+C+ 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G ++EA  V  +M    + PNV TY+ + D LC+ G +  A+++  EM   G E N  T+
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+L+    KA   E+ ++    M   G + D  TY  +I   C+  +L+ A  +L  M+ 
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  P   T+N++       G V G  R+   M +    PNT TYN LM+ +   K+   
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             ++ K M   EV PN NTY ILI  +C   +   A  +  EMI EK  +  +S Y  ++
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI-EKGFRLTASSYNALI 677

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFTARP 533
           + L +  +  +   L EKM     TA P
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKERLTAEP 705



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 171/344 (49%), Gaps = 5/344 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++IL++    AG   +A   F+ M      PD + + I++   C       A      +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +  E + + YT+++   C  G +S+A RV  +M M G+  +   ++ V+   CR G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A + F EM + G   + +T+  L+    +A   ++  +V  +M+  G + D +TY  L
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +CK GK+ +A  V N MV+K   PN  T+  +   + K GDV  A+ +  +M     
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           E N  TYN L+     + + +  ++   +M+E  ++P+V TY  +I   C     + A+ 
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            ++EM+ +K +KP    Y +++     +G+++  + L+E M+++
Sbjct: 552 LLQEML-DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 164/346 (47%), Gaps = 1/346 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   +  +   A   +  M+ + +++   T+++L+  Y + G   EA    N+M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    P+ + ++ +   LC++     A      +  K  E ++  Y +L+ G C+AGN+ 
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R   +M  AG++P+VYTY+ +I ALC+  ++ RAH +  EML+ G +P  +T+N LM
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                + R E   ++   M       +T TYN L+  +C +  ++   ++   M+ +   
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN +T+N++ +   K  ++  A   + +M +        +YN L+++    K      +L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            ++M +  +    + Y   I +     +  +      E++E   +K
Sbjct: 693 FEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVK 738



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++F+E+     + N  +Y+I++ ALC  G+I  AH +F EM      P+ +T+  
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++  +   S  E  +++ ++M   G E + + Y  +I   C +G++ DA++V+  MV  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              +A+ F  +     + GD+  A   + +M+      + VTY  L+     +       
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           ++ +EME+  ++ +  TY +LI  YC +G    A+    +M++++ + P    Y  +   
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR-VTPNVVTYTALSDG 469

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           L + G +    EL+ +M  +G 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGL 491


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 5/365 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  R  + +V T+++L+    ++    +A+   + M   GC P+ + ++++I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            +CR+ R  +A+ F + L    F+PD + YT +++G C A    + E +F EM      P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  T+ +++   CR G + RA  V  +M   GC  N+   N ++    K  R +   Q  
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M   GC  DTI+Y  ++   C+  + EDA ++L  MVRK C PN  TFN     + + 
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  +  +M +  CE N VTYN L+  F      D  L+L   M     +PN  TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITY 460

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+T  C     + A + + EM+++ C  P    + +++    + G + +  ELVE+M+
Sbjct: 461 TTLLTGLCNAERLDAAAELLAEMLQKDC-APNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 526 DRGFT 530
           + G T
Sbjct: 520 EHGCT 524



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 183/381 (48%), Gaps = 5/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K   F  A   +D M+++     + T+++++    R G   +A    NR+ 
Sbjct: 183 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 242

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
            YG  PD ++++ V+  LC  +R  + +  F  + +K   P+ + +  LVR +CR G + 
Sbjct: 243 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVE 302

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +V  +M   G   N    +IVI+ +C+ G++  A      M   GC P++I++  ++
Sbjct: 303 RAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 362

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   +A R E   ++  +M R  C  + +T+N  I   C+ G +E A  ++  M   GC 
Sbjct: 363 KGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCE 422

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N  T+N +       G V+ A  ++  M    C+PNT+TY  L+     ++  D   +L
Sbjct: 423 VNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAEL 479

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM + +  PNV T+ +L++ +C  G  + A + + +M+E  C  P    Y  +L  + 
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC-TPNLITYNTLLDGIT 538

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           +    ++  EL+  +V  G +
Sbjct: 539 KDCNSEEALELLHGLVSNGVS 559



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 173/339 (51%), Gaps = 5/339 (1%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           +RR +     AEA    +R    G APD    + +I  LCR+ R S+A     +  +   
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
             DV  Y  LV G+CR G +  A R+   M +A   P+ YTY+ +I  LC  G++  A  
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALS 166

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  +ML  GC+P+ +T+  L+    K++   + ++V ++M+  GC  + +TYN +I+  C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++G+++DA + LN +   G  P+  ++  + + +           ++ +M +  C PN V
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+++L++ F      +  +++ ++M  +    N     I+I   C  G  ++A++++  M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
               C  P +  Y  VL+ L RA + +  +EL+++MV +
Sbjct: 347 GSYGC-SPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 167/341 (48%), Gaps = 8/341 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN   K  + D A+ F++ M S        +++ +++   RA    +A      M    
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P+++ F+  I ILC+K    +A    + + +   E +++ Y  LV G+C  G +  A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F  M     +PN  TY+ ++  LC   ++  A ++ AEML+  C PN +TFN L+   
Sbjct: 446 ELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +    ++ +++  QM   GC  + ITYN L+D   KD   E+A+++L+ +V  G +P+ 
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T++ I   +S+   V  A +M+  ++DL   P  V YN ++       +TD  +     
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M  N   PN  TY   IT+  G+ +  +  K  R+++ E C
Sbjct: 623 MVSNGCMPNELTY---ITLIEGLAN-EDFLKETRDLLRELC 659



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 146/306 (47%), Gaps = 4/306 (1%)

Query: 135 FNWVTARPEFVHSPDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F ++     +  SPD       L G  R  +++ A   +  M  +N      TF+  +  
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
             + GL  +A     +M E+GC  + + ++ +++  C + R   A   F S+  K  P+ 
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--PNT 457

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I YT L+ G C A  +  A  +  EM      PNV T+++++   C+ G +  A ++  +
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M+E GC PN IT+N L+    K   +E+ L++ + +   G   D +TY+ +I    ++ +
Sbjct: 518 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +E+AIK+ + +   G  P A  +N I   + K  + +GA   +  M    C PN +TY  
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 637

Query: 433 LMQMFA 438
           L++  A
Sbjct: 638 LIEGLA 643



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 40/298 (13%)

Query: 235 SEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           +EA    D    + E PDV + T L+R  CR G  S+A RV R  + +G   +V+ Y+ +
Sbjct: 60  AEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTL 119

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           +   CR GQ+  A  + A M      P +                               
Sbjct: 120 VAGYCRYGQLDAARRLIASM------PVA------------------------------- 142

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D  TY  +I   C  G++ +A+ +L+ M+ +GC P+  T+ ++   + K      A  
Sbjct: 143 -PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 201

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M+   C PN VTYN+++         D   +    +     +P+  +Y  ++   C
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 261

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
               W +  +   EM+E+ C+ P    ++M+++   R G +++  +++E+M   G  A
Sbjct: 262 AAKRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 318



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 1/204 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+     A     A      M +  CAP+ + F++++S  C+K    EA    + +
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +    P++I Y  L+ G  +  N  EA  +   +   G+ P++ TYS +I  L R  ++
Sbjct: 519 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  + ++G  P ++ +N ++    K   T+  +  +  M   GC  + +TY  L
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG 387
           I+    +  L++   +L  +  +G
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRG 662


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 5/365 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  R  + +V T+++L+    ++    +A+   + M   GC P+ + ++++I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            +CR+ R  +A+ F + L    F+PD + YT +++G C A    + E +F EM      P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  T+ +++   CR G + RA  V  +M   GC  N+   N ++    K  R +   Q  
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M   GC  DTI+Y  ++   C+  + EDA ++L  MVRK C PN  TFN     + + 
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  +  +M +  CE N VTYN L+  F      D  L+L   M     +PN  TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITY 460

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+T  C     + A + + EM+++ C  P    + +++    + G + +  ELVE+M+
Sbjct: 461 TTLLTGLCNAERLDAAAELLAEMLQKDC-APNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 526 DRGFT 530
           + G T
Sbjct: 520 EHGCT 524



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 182/381 (47%), Gaps = 5/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K   F  A   +D M+++     + T+++++    R G   +A    NR+ 
Sbjct: 183 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 242

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
            YG  PD ++++ V+  LC  +R  + +  F  + +K   P+ + +  LVR +CR G + 
Sbjct: 243 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVE 302

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +V  +M   G   N    +IVI+ +C+ G++  A      M   GC P++I++  ++
Sbjct: 303 RAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 362

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   +A R E   ++  +M R  C  + +T+N  I   C+ G +E A  ++  M   GC 
Sbjct: 363 KGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCE 422

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N  T+N +       G V+ A  ++  M    C+PNT+TY  L+     ++  D   +L
Sbjct: 423 VNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAEL 479

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM + +  PNV T+ +L++ +C  G  + A + + +M+E  C  P    Y  +L  + 
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC-TPNLITYNTLLDGIT 538

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
                ++  EL+  +V  G +
Sbjct: 539 NDCNSEEALELLHGLVSNGVS 559



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 173/339 (51%), Gaps = 5/339 (1%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           +RR +     AEA    +R    G APD    + +I  LCR+ R S+A     +  +   
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
             DV  Y  LV G+CR G +  A R+   M +A   P+ YTY+ +I  LC  G++  A  
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALS 166

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  +ML  GC+P+ +T+  L+    K++   + ++V ++M+  GC  + +TYN +I+  C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++G+++DA + LN +   G  P+  ++  + + +           ++ +M +  C PN V
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+++L++ F      +  +++ ++M  +    N     I+I   C  G  ++A++++  M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
               C  P +  Y  VL+ L RA + +  +EL+++MV +
Sbjct: 347 GSYGC-SPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 166/341 (48%), Gaps = 8/341 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN   K  + D A+ F++ M S        +++ +++   RA    +A      M    
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P+++ F+  I ILC+K    +A    + + +   E +++ Y  LV G+C  G +  A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F  M     +PN  TY+ ++  LC   ++  A ++ AEML+  C PN +TFN L+   
Sbjct: 446 ELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +    ++ +++  QM   GC  + ITYN L+D    D   E+A+++L+ +V  G +P+ 
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T++ I   +S+   V  A +M+  ++DL   P  V YN ++       +TD  +     
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M  N   PN  TY   IT+  G+ +  +  K  R+++ E C
Sbjct: 623 MVSNGCMPNELTY---ITLIEGLAN-EDFLKETRDLLRELC 659



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 4/306 (1%)

Query: 135 FNWVTARPEFVHSPDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F ++     +  SPD       L G  R  +++ A   +  M  +N      TF+  +  
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
             + GL  +A     +M E+GC  + + ++ +++  C + R   A   F S+  K  P+ 
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--PNT 457

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I YT L+ G C A  +  A  +  EM      PNV T+++++   C+ G +  A ++  +
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M+E GC PN IT+N L+        +E+ L++ + +   G   D +TY+ +I    ++ +
Sbjct: 518 MMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +E+AIK+ + +   G  P A  +N I   + K  + +GA   +  M    C PN +TY  
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 637

Query: 433 LMQMFA 438
           L++  A
Sbjct: 638 LIEGLA 643



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 40/298 (13%)

Query: 235 SEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           +EA    D    + E PDV + T L+R  CR G  S+A RV R  + +G   +V+ Y+ +
Sbjct: 60  AEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTL 119

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           +   CR GQ+  A  + A M      P +                               
Sbjct: 120 VAGYCRYGQLDAARRLIASM------PVA------------------------------- 142

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D  TY  +I   C  G++ +A+ +L+ M+ +GC P+  T+ ++   + K      A  
Sbjct: 143 -PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 201

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M+   C PN VTYN+++         D   +    +     +P+  +Y  ++   C
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 261

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
               W +  +   EM+E+ C+ P    ++M+++   R G +++  +++E+M   G  A
Sbjct: 262 AAKRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 318



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 1/204 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+     A     A      M +  CAP+ + F++++S  C+K    EA    + +
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +    P++I Y  L+ G     N  EA  +   +   G+ P++ TYS +I  L R  ++
Sbjct: 519 MEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  + ++G  P ++ +N ++    K   T+  +  +  M   GC  + +TY  L
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG 387
           I+    +  L++   +L  +  +G
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRG 662


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 198/435 (45%), Gaps = 49/435 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV     Y ++I    + ++ D A+     MK   V   V T++IL+  + +AGL  
Sbjct: 445 RKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIE 504

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
           +A   F+ M   GC+P+ + ++ ++    + ++  +A   F  +  D   P+ I Y+ L+
Sbjct: 505 QAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALI 564

Query: 260 RGWCRAGNISEAERVFREM----------------KMAGIQPNVYTYSIVIDALCRCGQI 303
            G C+AG I +A  V+ ++                    I PNV TY  +++ LC+  ++
Sbjct: 565 DGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKV 624

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + AHD+   ML  GCEPN I ++ L+    K    +   +V+ +M + G      TY  L
Sbjct: 625 SDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSL 684

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID   KDG+L+ A+KVL+ M++  CNPN  T+  +   + K G+   A  +   M+   C
Sbjct: 685 IDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGC 744

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG------- 476
            PN VTY  L+     +   D  L+L  +M+     PN  TYRILI   C  G       
Sbjct: 745 SPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHL 804

Query: 477 --------HWNNAYKYIR-----------------EMIEEKCLKPGSSVYEMVLQQLRRA 511
                   HW    +  R                 E +E     P + VY M++    +A
Sbjct: 805 LLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKA 864

Query: 512 GQLQKHEELVEKMVD 526
           G+L+   EL ++M++
Sbjct: 865 GRLETALELHKEMME 879



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 169/345 (48%), Gaps = 18/345 (5%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
           +A      M   G  PD   ++ VI+ LC+ +R  +A   F  +K     PDV  YT L+
Sbjct: 435 KAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILI 494

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             +C+AG I +A+  F EM+ AG  PNV TY+ ++ A  +  Q+ +A+D+F  M+   C 
Sbjct: 495 DSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACY 554

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTI-----TYNFL 363
           PN+IT++ L+    KA   +K  +VY ++              G + DTI     TY  L
Sbjct: 555 PNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGAL 614

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++  CK  K+ DA  +L++M+  GC PN   ++ +     K+G+++ A  ++ +M     
Sbjct: 615 VNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGY 674

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  TY  L+         D+ +K+  +M ++   PNV TY  ++   C  G    A  
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALN 734

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +  ++E+K   P    Y  ++  L +AG++    EL  +M  +G
Sbjct: 735 LL-SLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 187/432 (43%), Gaps = 61/432 (14%)

Query: 157 LAGKVRQFDLAW--HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L G +++  L W    I++M +     +   F+ LV  Y  A   A A   FNRM   GC
Sbjct: 313 LTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGC 372

Query: 215 APDKIAFSIVISILCRKRRASE------AQSFFDSL------------------------ 244
            P  + ++I I  +C +           A+  ++ +                        
Sbjct: 373 PPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGK 432

Query: 245 ------------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
                       +  F PD   YT ++   C+A  + +A  +F+EMK  G+ P+VYTY+I
Sbjct: 433 FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTI 492

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID+ C+ G I +A   F EM   GC PN +T+  L+  ++K+ +  +   ++++M    
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN----------------PNASTFN 396
           C  + ITY+ LID  CK G+++ A +V   ++    N                PN  T+ 
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYG 612

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +   + K   V+ AH +   M    CEPN + Y+ L+  F      D   ++   M + 
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC 672

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
              P+V+TY  LI      G  + A K + +M+++ C  P    Y  ++  L + G+ +K
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC-NPNVVTYTAMVDGLCKTGETEK 731

Query: 517 HEELVEKMVDRG 528
              L+  M  +G
Sbjct: 732 ALNLLSLMEKKG 743



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/468 (20%), Positives = 177/468 (37%), Gaps = 79/468 (16%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +  + H+   Y  +  + G       A   +  +   + ++     ++LVRR 
Sbjct: 120 FFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRC 179

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL------------------------- 228
              GL  EA+    R++++G  P  + ++ ++ +L                         
Sbjct: 180 CLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDR 239

Query: 229 ----------CRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
                     C++ R  +A    +  ++ F+ D ++ T ++ G   A   +EA      M
Sbjct: 240 STVGSFAQALCKEGRWGDALDLLE--REDFKLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +     PNV TY  ++    +  Q+     +   M+  GC P+   FN+L+  +  A   
Sbjct: 298 RCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDY 357

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLID--------------------------------- 365
               +++N+M   GC    + YN  I                                  
Sbjct: 358 AYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNK 417

Query: 366 --------CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
                   C C  GK E A +++  M+RKG  P+AST+  +   + +   V+ A  ++ +
Sbjct: 418 INTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQE 477

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           MK +   P+  TY IL+  F  +   +       EM      PNV TY  L+  Y     
Sbjct: 478 MKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
              A      M+ + C  P +  Y  ++  L +AG++QK  E+  K++
Sbjct: 538 LYQANDIFHRMVGDACY-PNAITYSALIDGLCKAGEIQKACEVYAKLI 584



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 145/381 (38%), Gaps = 68/381 (17%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y  ++N   K ++   A   +D M +   E     +  LV  + + G    A  
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQE 664

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
            F RM + G  P    ++ +I  + +  R   A       LKD   P+V+ YT +V G C
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G   +A  +   M+  G  PNV TY+ +ID L + G++    ++F +M   GC PN +
Sbjct: 725 KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYV 784

Query: 324 TFNNLMR---------------VHVKASRTEKVLQVYNQ---------MKRLGC-----E 354
           T+  L+                  +K +   K LQ Y           +  LG       
Sbjct: 785 TYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMES 844

Query: 355 ADTI----TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            DT      Y  LID   K G+LE A+++   M+    + N ++ +M             
Sbjct: 845 HDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDM------------- 891

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
                              +  L+Q    S   +  + L  EM    + P+++ +  L+ 
Sbjct: 892 -------------------HTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVK 932

Query: 471 MYCGMGHWNNAYKYIREMIEE 491
                  WN A +    + +E
Sbjct: 933 GLIERNKWNEALQLCYGICQE 953



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 127/310 (40%), Gaps = 41/310 (13%)

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           LVR  C  G   EA      +K  G +P+  TY+ ++  L   GQ+  A  V  EM   G
Sbjct: 175 LVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASG 234

Query: 318 CEPNSITFNNLMRVHVKASRTEKVL-------------------------QVYNQ----M 348
              +  T  +  +   K  R    L                          ++N+    +
Sbjct: 235 FCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFL 294

Query: 349 KRLGCEA---DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            R+ C +   + +TY  L+    K  +L    +++N M+ +GCNP+ S FN +       
Sbjct: 295 HRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNA 354

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS------TDMVLKLKKEMEENEVE 459
            D   A++++ +M    C P  V YNI +      +        D+  K+ +EM      
Sbjct: 355 EDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCV 414

Query: 460 PN-VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            N +NT      + CG+G +  A++ ++EM+  K   P +S Y  V+  L +A ++ K  
Sbjct: 415 LNKINTANFARCL-CGVGKFEKAFQIVKEMM-RKGFVPDASTYTKVITFLCQAKRVDKAF 472

Query: 519 ELVEKMVDRG 528
            L ++M   G
Sbjct: 473 LLFQEMKKVG 482



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 115/249 (46%), Gaps = 6/249 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  M++   K  + + A + + LM+ +     V T++ L+    +AG     +  F +M+
Sbjct: 716 YTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMK 775

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV-YTNLVRGWCRAGNIS 269
             GCAP+ + + I+I+  C      +A    D +K    P  +  Y   V+G+ +     
Sbjct: 776 TKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFL 833

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT---FN 326
            +  +  EM+     P    Y ++ID+  + G++  A ++  EM+EV    N  +     
Sbjct: 834 ASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHT 893

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +L++    +S+ E+ + +Y++M+R G   D   +  L+    +  K  +A+++   + ++
Sbjct: 894 SLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQE 953

Query: 387 GCNPNASTF 395
           G N   + F
Sbjct: 954 GVNWEGNKF 962



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 6/263 (2%)

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           AER+ RE+            ++++   C  G    A +    + + G  P+++T+N L++
Sbjct: 153 AERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQ 212

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
           V   A + E   +V  +M   G   D  T        CK+G+  DA+ +L    R+    
Sbjct: 213 VLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE---REDFKL 269

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +      +   + +    N A     +M+     PN VTY  L+  F   K      ++ 
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRII 329

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
             M      P+ + +  L+  YC    +  AYK    M    C  PG  VY + +  +  
Sbjct: 330 NMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGC-PPGYVVYNIFIGSICG 388

Query: 511 AGQLQKHE--ELVEKMVDRGFTA 531
             +L   E  +L EK+ +    A
Sbjct: 389 REELPNPELLDLAEKVYEEMLVA 411


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 188/388 (48%), Gaps = 2/388 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P  Y  +I L     Q   A   ++ M    V +    F+ ++  + R G  A A + F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           + M++ G A D + ++ +I+ LCR     EA+     ++DK  + D + YT L+ G+C+ 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G ++EA  V  +M    + PNV TY+ + D LC+ G +  A+++  EM   G E N  T+
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+L+    KA   E+ ++    M   G + D  TY  +I   C+  +L+ A  +L  M+ 
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  P   T+N++       G V G  R+   M +    PNT TYN LM+ +   K+   
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             ++ K M   EV PN NTY ILI  +C   +   A  +  EMI EK  +  +S Y  ++
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI-EKGFRLTASSYNALI 677

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFTARP 533
           + L +  +  +   L EKM     TA P
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKERLTAEP 705



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 171/344 (49%), Gaps = 5/344 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++IL++    AG   +A   F+ M      PD + + I++   C       A      +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +  E + + YT+++   C  G +S+A RV  +M M G+  +   ++ V+   CR G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A + F EM + G   + +T+  L+    +A   ++  +V  +M+  G + D +TY  L
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +CK GK+ +A  V N MV+K   PN  T+  +   + K GDV  A+ +  +M     
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           E N  TYN L+     + + +  ++   +M+E  ++P+V TY  +I   C     + A+ 
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            ++EM+ +K +KP    Y +++     +G+++  + L+E M+++
Sbjct: 552 LLQEML-DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 180/393 (45%), Gaps = 54/393 (13%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   +  +   A   +  M+ + +++   T+++L+  Y + G   EA    N+M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    P+ + ++ +   LC++     A      +  K  E ++  Y +L+ G C+AGN+ 
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R   +M  AG++P+VYTY+ +I ALC+  ++ RAH +  EML+ G +P  +T+N LM
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 330 RVHVKASRTE---KVLQ------------VYNQMKRLGCEADTI---------------- 358
                + R E   ++L+             YN + +  C    +                
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 359 ----TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
               TYN LI  HCK   +++A+   + M+ KG    AS++N + R ++K      A R+
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 415 YGKMKD--LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM------------EENEVEP 460
           + KM+   L  EP+   YN  + +     + +  L L  E+            +++  E 
Sbjct: 693 FEKMRKERLTAEPD--VYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDDDFAEE 750

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +++  R L  M+  +G++   Y Y   ++E  C
Sbjct: 751 HISIMRFLEEMWEVLGYYR--YVYYSRLLELIC 781



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++F+E+     + N  +Y+I++ ALC  G+I  AH +F EM      P+ +T+  
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++  +   S  E  +++ ++M   G E + + Y  +I   C +G++ DA++V+  MV  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              +A+ F  +     + GD+  A   + +M+      + VTY  L+     +       
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           ++ +EME+  ++ +  TY +LI  YC +G    A+    +M++++ + P    Y  +   
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR-VTPNVVTYTALSDG 469

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           L + G +    EL+ +M  +G 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGL 491


>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
          Length = 501

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 198/418 (47%), Gaps = 52/418 (12%)

Query: 130 QVLSFFNWVTARPEFVH--SPDLYHEMINLAGKVRQ-FDLAWHFIDLMKSRNVEITVDTF 186
           + L FF+ +   PE     SP      ++LA ++R    L    + L     +  T  TF
Sbjct: 82  RALLFFHALLRLPERSRDLSPCTVDLALDLAARLRHPRQLTSSILALFPRHGLAFTPRTF 141

Query: 187 SILVRRYV----RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
            IL  R+     R  LA     + +R   +G A D   F+ ++  L + RRAS+A S   
Sbjct: 142 PILFERFAMSHRRPDLAIRLFLSLHR--SHGIAQDLPLFNSLLDALVKSRRASKAASLVR 199

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +L+ +F PD + Y  L  GWCR  + S A  + R+M  +GI P   TY+I++    R GQ
Sbjct: 200 ALEQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQ 259

Query: 303 ITRAHDVFAEMLEVG-----CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           +  A D F +M   G     C+P+ +++  ++     A + +K  +V+++M   GC+  T
Sbjct: 260 LQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPST 319

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TYN LI   CK G LEDA+ V + MVRKG  PN  T+ ++ R +   G V  A ++  +
Sbjct: 320 ATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDR 379

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           MK   CEPN  TYN+L               ++  +EE E+E  ++ +    TM  G   
Sbjct: 380 MKSEGCEPNVQTYNVL---------------IRYSLEEGEIEKGLDLFE---TMSKG--- 418

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQL---RRAGQLQKHEELVEKMVDRGFTAR 532
                        E+CL P    Y +++  +   +RA  +     +V +MVDRG+  R
Sbjct: 419 -------------EECL-PNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPR 462


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 198/417 (47%), Gaps = 37/417 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   KV +F  A    D M +R  +  V T++ ++    + G    A   F +M 
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMG 254

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG-------- 261
           E GC PD + +S +I  LC+ RR +EA   F  +K K   P++  Y +L++G        
Sbjct: 255 EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR 314

Query: 262 ---------------------------WCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                                      +C+ GN+ EA  V + M   G++PNV TYS ++
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +      ++  A  +F  M+  GC+P+  ++N L+  + KA R  +  Q++N+M   G  
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 434

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D ++YN LID  C+ G+L +A  +  +M+  G  P+  T++++     K G +  A R+
Sbjct: 435 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 494

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  M+    +PN V YNIL+     S++     KL  E+    ++PNV  Y  +I   C 
Sbjct: 495 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCK 554

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            G  + A +  R M E+ C  P    Y ++++   +     +  +L+ +M ++GF A
Sbjct: 555 EGLLDEALEAFRNMEEDGC-PPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVA 610



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 198/420 (47%), Gaps = 39/420 (9%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD Y  H +IN   ++++ DL +  +  +    +++T+ TF+ L+    + G   +AV 
Sbjct: 154 SPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVE 213

Query: 205 AFN-----------------------------------RMEEYGCAPDKIAFSIVISILC 229
            F+                                   +M E GC PD + +S +I  LC
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + RR +EA   F  +K K   P++  Y +L++G C      EA  +  EM    I PN+ 
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T+S++I+  C+ G +  A  V   M E+G EPN +T+++LM  +   +   +  ++++ M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              GC+ D  +YN LI+ +CK  ++ +A ++ N M+ +G  P+  ++N +   + +LG +
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             AH ++  M      P+  TY+IL+  F          +L + M+   ++PN+  Y IL
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I   C   +   A K   E+  +  L+P   +Y  ++  L + G L +  E    M + G
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQG-LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 171/338 (50%), Gaps = 6/338 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           + L  F+++ A+     SP++  Y+ +I       ++  A   ++ M S N+   + TFS
Sbjct: 280 EALDIFSYMKAKG---ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           +L+  + + G   EA      M E G  P+ + +S +++    +    EA+  FD +  K
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396

Query: 248 F-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             +PDV  Y  L+ G+C+A  I EA+++F EM   G+ P++ +Y+ +ID LC+ G++  A
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           HD+F  ML  G  P+  T++ L+    K     K  +++  M+    + + + YN LID 
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK   L++A K+ + +  +G  PN   +  I   + K G ++ A   +  M++  C PN
Sbjct: 517 MCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPN 576

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
             +YN++++ F   K     ++L  EM E     +V T
Sbjct: 577 EFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 159/335 (47%), Gaps = 9/335 (2%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-----PDVIVY 255
           +A+  FN M      P  I F+ ++S + + R   +A     SL  + E     PD    
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDA---VISLSKQMELAGLSPDTYTL 160

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
             L+  + +   +     V  ++   G+Q  + T++ +I+ LC+ G+  +A ++F +M+ 
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA 220

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G +P+  T+  ++    K   T     ++ +M   GC+ D +TY+ +ID  CKD ++ +
Sbjct: 221 RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 280

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A+ + + M  KG +PN  T+N + + +        A  M  +M  L   PN VT+++L+ 
Sbjct: 281 ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 340

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           +F    +      + K M E  VEPNV TY  L+  Y        A K    MI + C K
Sbjct: 341 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC-K 399

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           P    Y +++    +A ++ + ++L  +M+ +G T
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 434



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 2/157 (1%)

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK-CEPNTVTYN 431
           ++DA+   N M+ +   P    FN +   I K+   + A     K  +L    P+T T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           +L+  F   +  D+   +  ++ +  ++  + T+  LI   C +G +  A +   +M+  
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV-A 220

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  +P    Y  ++  L + G+      L  KM + G
Sbjct: 221 RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAG 257


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 188/388 (48%), Gaps = 2/388 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P  Y  +I L     Q   A   ++ M    V +    F+ ++  + R G  A A + F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           + M++ G A D + ++ +I+ LCR     EA+     ++DK  + D + YT L+ G+C+ 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G ++EA  V  +M    + PNV TY+ + D LC+ G +  A+++  EM   G E N  T+
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+L+    KA   E+ ++    M   G + D  TY  +I   C+  +L+ A  +L  M+ 
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  P   T+N++       G V G  R+   M +    PNT TYN LM+ +   K+   
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             ++ K M   EV PN NTY ILI  +C   +   A  +  EMI EK  +  +S Y  ++
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI-EKGFRLTASSYNALI 677

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFTARP 533
           + L +  +  +   L EKM     TA P
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKDRLTAEP 705



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 171/344 (49%), Gaps = 5/344 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++IL++    AG   +A   F+ M      PD + + I++   C       A      +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +  E + + YT+++   C  G +S+A RV  +M M G+  +   ++ V+   CR G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A + F EM + G   + +T+  L+    +A   ++  +V  +M+  G + D +TY  L
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +CK GK+ +A  V N MV+K   PN  T+  +   + K GDV  A+ +  +M     
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           E N  TYN L+     + + +  ++   +M+E  ++P+V TY  +I   C     + A+ 
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            ++EM+ +K +KP    Y +++     +G+++  + L+E M+++
Sbjct: 552 LLQEML-DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 180/393 (45%), Gaps = 54/393 (13%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   +  +   A   +  M+ + +++   T+++L+  Y + G   EA    N+M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    P+ + ++ +   LC++     A      +  K  E ++  Y +L+ G C+AGN+ 
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R   +M  AG++P+VYTY+ +I ALC+  ++ RAH +  EML+ G +P  +T+N LM
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 330 RVHVKASRTE---KVLQ------------VYNQMKRLGCEADTI---------------- 358
                + R E   ++L+             YN + +  C    +                
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 359 ----TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
               TYN LI  HCK   +++A+   + M+ KG    AS++N + R ++K      A R+
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 415 YGKMKD--LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM------------EENEVEP 460
           + KM+   L  EP+   YN  + +     + +  L L  E+            +++  E 
Sbjct: 693 FEKMRKDRLTAEPD--VYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDDDFAEE 750

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +++  R L  M+  +G++   Y Y   ++E  C
Sbjct: 751 HISIMRFLEEMWEVLGYYR--YVYYSRLLELIC 781



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++F+E+     + N  +Y+I++ ALC  G+I  AH +F EM      P+ +T+  
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++  +   S  E  +++ ++M   G E + + Y  +I   C +G++ DA++V+  MV  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              +A+ F  +     + GD+  A   + +M+      + VTY  L+     +       
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           ++ +EME+  ++ +  TY +LI  YC +G    A+    +M++++ + P    Y  +   
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR-VTPNVVTYTALSDG 469

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           L + G +    EL+ +M  +G 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGL 491


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 197/435 (45%), Gaps = 49/435 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV     Y ++I       + + A+     MK   V   V T++IL+  + +AGL  
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A   F  M   GC+P  + ++ +I    + ++  +A   F  + D    P+ + Y  LV
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 400

Query: 260 RGWCRAGNISEAERVFREMKMAG----------------IQPNVYTYSIVIDALCRCGQI 303
            G C+AGNIS+A  V+ ++                    + PNV TY  ++D LC+  ++
Sbjct: 401 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKV 460

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             AH++   ML  GCEPN I ++ L+    KA + +   +V+ QM + G      TY  L
Sbjct: 461 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 520

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID   KDG+L+ A+KVL+ M++  C PN  T+  +   + ++G+   A ++   M++  C
Sbjct: 521 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 580

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN VTY  L+     +   D+ L L  +M      PN  TYR+LI   C  G  + A  
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARL 640

Query: 484 YIREM--------------------------------IEEKCLKPGSSVYEMVLQQLRRA 511
            + EM                                +E     P + VY M++    +A
Sbjct: 641 LLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKA 700

Query: 512 GQLQKHEELVEKMVD 526
           G+L+   EL ++M++
Sbjct: 701 GRLEIAMELHKEMME 715



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 175/382 (45%), Gaps = 18/382 (4%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            DLA      M + N  +     +   R     G   +A      M   G  PD   +S 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           VI+ LC   +  +A   F  +K     PDV  YT L+  +C+AG I +A+ +F EM+  G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P V TY+ +I A  +  Q+ +A+D+F  M++ GC PN +T+  L+    KA    K  
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 343 QVYNQMKRLGCEADT----------------ITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +VY ++      AD+                +TY  L+D  CK  K++ A ++L++M+  
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC PN   ++ +     K G ++ A  ++ +M      P+  TY  L+         D+ 
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +K+  +M ++   PNV TY  +I   C +G    A K +  ++EEK   P    Y  ++ 
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL-SLMEEKGCSPNVVTYTALID 592

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L +AG++    +L  +M  +G
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKG 614



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 164/392 (41%), Gaps = 49/392 (12%)

Query: 157 LAGKVRQFDLAW--HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L+G +++  L W    I++M +         F+ LV  Y      A A    NRM   GC
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
            P  + ++I I  +C + +                PD++                 AE++
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPS-------------PDLL---------------DLAEKI 240

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           + EM  A    N    +     LC  G+  +A  +  EM+  G  P++ T++ ++     
Sbjct: 241 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 300

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A++ EK   ++ +MK +G   D  TY  LID  CK G +E A  +   M   GC+P   T
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-----------------QMF 437
           +  +     K   V  A+ ++ +M D  C PN VTY  L+                 ++ 
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
            TS S D       E + + + PNV TY  L+   C     ++A++ +  M+   C +P 
Sbjct: 421 GTSDSADSDFYFPCE-DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC-EPN 478

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             VY+ ++    +AG++   +E+  +M   G+
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 23/302 (7%)

Query: 242 DSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           D LKD  + P  + Y  LV+    AG +    RV +EM  +G   + +T      ALC+ 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVH-----VKASRTEKVLQVYNQMKRLGCEA 355
           G+   A D+         E      + ++  H     ++AS  ++ +   ++M+   C  
Sbjct: 89  GRWADALDMI--------EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 140

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           + +TY  L+    K  +L    +++N M+ +GCNPN S FN +        D   A+++ 
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200

Query: 416 GKMKDLKCEPNTVTYNILM------QMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRIL 468
            +M    C P  V YNI +      +   +    D+  K+  EM   N V   VN     
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + CG+G ++ A++ I+EM+  K   P +S Y  V+  L  A +++K   L ++M   G
Sbjct: 261 RCL-CGVGKFDKAFQLIKEMM-RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 318

Query: 529 FT 530
            T
Sbjct: 319 VT 320



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 36/287 (12%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  + D A      M       +V T++ L+ R  + G    A+   ++M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            +  C P+ + ++ +I  LCR   + +A      +++K   P+V+ YT L+ G  +AG I
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV------------ 316
             +  +F +M   G  PN  TY ++I+ LC  G + +A  +  EM +             
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660

Query: 317 ---------------------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL--GC 353
                                G  P +  +  L+    KA R E  ++++ +M  +    
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 720

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           + D   Y  LI   C   ++E+A ++ + M R+G  P  S F  + +
Sbjct: 721 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIK 767



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 36/230 (15%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MI+   ++ + + A   + LM+ +     V T++ L+    +AG    ++  F +M 
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI----------------- 253
             GC+P+ + + ++I+ LC      +A+     +K  + P  +                 
Sbjct: 612 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS 671

Query: 254 -----------------VYTNLVRGWCRAGNISEAERVFREMKM--AGIQPNVYTYSIVI 294
                            VY  L+  + +AG +  A  + +EM    + ++ +   Y+ +I
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLI 731

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
            ALC   Q+  A  +++EM   G  P    F  L++  V+  + ++ LQ+
Sbjct: 732 QALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 191/386 (49%), Gaps = 2/386 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S   Y  ++   GK R  D     +  M++  ++  V TF+I +R   RAG   EA 
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGW 262
               RM++ GC PD + ++++I  LC  R+   A+  F+ +K  + +PD + Y  L+  +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
               ++   ++ + EM+  G  P+V T++I++DALC+ G    A D    M + G  PN 
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+N L+   ++  R +  L+++  M+ LG +    TY   ID + K G    A++    
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M  KG  PN    N     ++K G    A +++  +KD+   P++VTYN++M+ ++    
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  +KL  EM EN  EP+V     LI         + A+K    M E K LKP    Y 
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK-LKPTVVTYN 577

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
            +L  L + G++Q+  EL E MV +G
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKG 603



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 185/422 (43%), Gaps = 75/422 (17%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++++++ Y + G   EA+   + M E GC PD I  + +I+ L +  R  EA   F  +
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           K+ K +P V+ Y  L+ G  + G I EA  +F  M   G  PN  T++ + D LC+  ++
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR------------- 350
           T A  +  +M+++GC P+  T+N ++   VK  + ++ +  ++QMK+             
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684

Query: 351 -------LGCEADTITYNFLIDCH-------------------------------CKDGK 372
                  L  +A  I  NFL +C                                  +G 
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744

Query: 373 LEDAIKVLNSMVRKGC---------------------NPNASTFNMIFRCISKLGDVNGA 411
             D   +L  ++R  C                      P   T+N++   + +   +  A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ ++K   C P+  TYN L+  +  S   D + +L KEM  +E E N  T+ I+I+ 
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
               G+ ++A     +++ ++   P +  Y  ++  L ++G+L + ++L E M+D G   
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG--C 922

Query: 532 RP 533
           RP
Sbjct: 923 RP 924



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 2/285 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    +V + D A      M+S  V+ T  T+ + +  Y ++G +  A+  F +M+
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G AP+ +A +  +  L +  R  EA+  F  LKD    PD + Y  +++ + + G I 
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++  EM   G +P+V   + +I+ L +  ++  A  +F  M E+  +P  +T+N L+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  + ++ ++++  M + GC  +TIT+N L DC CK+ ++  A+K+L  M+  GC 
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           P+  T+N I   + K G V  A   + +MK L   P+ VT   L+
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLL 684



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 4/338 (1%)

Query: 170  FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            F    K   V+  + T+++L+   + A +   A   F +++  GC PD   ++ ++    
Sbjct: 772  FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831

Query: 230  RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE-MKMAGIQPNV 287
            +  +  E    +  +   + E + I +  ++ G  +AGN+ +A  ++ + M      P  
Sbjct: 832  KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891

Query: 288  YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             TY  +ID L + G++  A  +F  ML+ GC PN   +N L+    KA   +    ++ +
Sbjct: 892  CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951

Query: 348  MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
            M + G   D  TY+ L+DC C  G++++ +     +   G NP+   +N+I   + K   
Sbjct: 952  MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011

Query: 408  VNGAHRMYGKMKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +  A  ++ +MK  +   P+  TYN L+     +   +   K+  E++   +EPNV T+ 
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071

Query: 467  ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             LI  Y   G   +AY   + M+      P +  YE +
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGG-FSPNTGTYEQL 1108



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 6/314 (1%)

Query: 222  SIVISIL---CRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFR 276
            SI++ I+   C+    S A++ F+        +P +  Y  L+ G   A  I  A+ VF 
Sbjct: 750  SILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFL 809

Query: 277  EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            ++K  G  P+V TY+ ++DA  + G+I    +++ EM    CE N+IT N ++   VKA 
Sbjct: 810  QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869

Query: 337  RTEKVLQVY-NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +  L +Y + M          TY  LID   K G+L +A ++   M+  GC PN + +
Sbjct: 870  NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 929

Query: 396  NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
            N++     K G+ + A  ++ +M      P+  TY++L+         D  L   KE++E
Sbjct: 930  NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989

Query: 456  NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
            + + P+V  Y ++I           A     EM   + + P    Y  ++  L  AG ++
Sbjct: 990  SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049

Query: 516  KHEELVEKMVDRGF 529
            +  ++  ++   G 
Sbjct: 1050 EAGKIYNEIQRAGL 1063



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 141/297 (47%), Gaps = 2/297 (0%)

Query: 233 RASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           +  E    FD ++ +  + D   Y  + +     G + +A    R+M+  G   N Y+Y+
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I  L +    T A +V+  M+  G  P+  T+++LM    K    + V+ +  +M+ L
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G + +  T+   I    + GK+ +A ++L  M  +GC P+  T+ ++   +     ++ A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ KMK  + +P+ VTY  L+  F+ ++  D V +   EME++   P+V T+ IL+  
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C  G++  A+  +  M ++  L P    Y  ++  L R  +L    EL   M   G
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGIL-PNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 2/181 (1%)

Query: 150  LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            +Y+ +IN  GK  + D A      M    V   + T+S+LV      G   E +H F  +
Sbjct: 928  IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987

Query: 210  EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGN 267
            +E G  PD + ++++I+ L +  R  EA   F+ +K      PD+  Y +L+     AG 
Sbjct: 988  KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047

Query: 268  ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            + EA +++ E++ AG++PNV+T++ +I      G+   A+ V+  M+  G  PN+ T+  
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107

Query: 328  L 328
            L
Sbjct: 1108 L 1108



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 1/263 (0%)

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + E   VF  M+   I+ +  TY  +  +L   G + +A     +M E G   N+ ++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+ + +K+    + ++VY +M   G      TY+ L+    K   ++  + +L  M  
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G  PN  TF +  R + + G +N A+ +  +M D  C P+ VTY +L+    T++  D 
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             ++ ++M+    +P+  TY  L+  +      ++  ++  EM E+    P    + +++
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM-EKDGHVPDVVTFTILV 370

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
             L +AG   +  + ++ M D+G
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQG 393



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 1/201 (0%)

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T N ++       + E++  V++ M++   + DT TY  +       G L+ A   L  M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              G   NA ++N +   + K      A  +Y +M      P+  TY+ LM      +  
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D V+ L KEME   ++PNV T+ I I +    G  N AY+ ++ M +E C  P    Y +
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC-GPDVVTYTV 298

Query: 504 VLQQLRRAGQLQKHEELVEKM 524
           ++  L  A +L   +E+ EKM
Sbjct: 299 LIDALCTARKLDCAKEVFEKM 319


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 182/379 (48%), Gaps = 1/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I      ++ D A    + +K+      V  ++ ++   ++AG   + +  F  M 
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
              C P +  +++VI  LC+ +   +A   F+ +  K   PD I YT L+ G+ +A  + 
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 230

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++   M   G +P   TY  ++   C+   I  A +V A+M E GCEP    F +L+
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 290

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             ++   R E+  QV  +M   GC  D I Y  LID     G++ +A  V +SM+ KGC 
Sbjct: 291 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A T+  I +  SK+G+V  A  +   M      P+   YN LM  +   +  D    +
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 410

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M  + ++PN  T+ +L+      G  + A+   +EM+E++ + P    Y +++  L 
Sbjct: 411 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLG 470

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +AG++ +     ++M+DRG
Sbjct: 471 KAGRVSEAFLQFQEMIDRG 489



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 169/379 (44%), Gaps = 38/379 (10%)

Query: 187 SILVRRYVRAGLAA-----EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           +I+    V +GLA+     EA   FN M + GC PD IAF+ +I   C+  +        
Sbjct: 6   TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLL 65

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGN--------------------------------IS 269
           +    +F PDV +YT+++ G+C+AG+                                I 
Sbjct: 66  NQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRID 125

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +F E+K AG  PNV  Y+ VID L + G+I      F EM    C P   T+  ++
Sbjct: 126 EACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVI 185

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA       +V+ QM + GC  DTITY  LID   K  K+++A K+L+ M+ KG  
Sbjct: 186 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 245

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P A T+  I     KL  +N A  +  +M++  CEP    +  L+  + +    +   ++
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM      P+V  Y  LI +    G    A      MIE+ C  P +  Y  ++Q   
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC-APDALTYGTIIQNFS 364

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G ++   E++E M   G
Sbjct: 365 KIGNVEAAGEILELMAKSG 383



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 168/365 (46%), Gaps = 3/365 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A   +D+M ++  E T  T+  +V  + +  +  EA     +M 
Sbjct: 216 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 275

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
           E GC P    F+ ++S    K RA EA      +  +   PDVI+YT+L+      G + 
Sbjct: 276 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 335

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  VF  M   G  P+  TY  +I    + G +  A ++   M + G  P+   +N+LM
Sbjct: 336 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 395

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-C 388
             +VK  R ++   VY++M   G + + +T+N L+    KDGK + A  +   M+ K   
Sbjct: 396 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEV 455

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   ++ ++   + K G V+ A   + +M D    P   TY  L+   A +       K
Sbjct: 456 PPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK 515

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L ++M +  V P+V  Y  LIT        + A+   +EM++  C  P    Y+++ +  
Sbjct: 516 LVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGC-APNEVTYKVLRRGF 574

Query: 509 RRAGQ 513
           R AG+
Sbjct: 575 RAAGR 579



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 35/349 (10%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEA 271
           GC P  ++++ VIS L    +  EA  FF+S+ D   EPDVI +T L+ G+C+AG     
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCG------------------------------ 301
            ++  +  +   +P+V+ Y+ VI   C+ G                              
Sbjct: 62  HKLLNQ-ALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 302 --QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             +I  A ++F E+   GC PN + +  ++   +KA R E  L+ + +M    C     T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y  +ID  CK   L DA KV   MV+KGC P+  T+  +    SK   ++ A ++   M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
               EP  VTY  ++  F      +   ++  +M E   EP +  +  L++ Y   G   
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            AY+ + EM    C  P   +Y  ++  L   G++ +   + + M+++G
Sbjct: 301 EAYQVLTEMTARGC-APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 348



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 154/333 (46%), Gaps = 38/333 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K+   + A   I  M+ R  E  +  F+ L+  Y+  G A EA      M 
Sbjct: 251 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 310

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
             GCAPD I ++ +I +L    R  EA+  FDS+ +K   PD + Y  +++ + + GN+ 
Sbjct: 311 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +   M  +G+ P+ + Y+ ++D   +  ++ +A  V+  M+  G +PN++TFN LM
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430

Query: 330 RVHVKASRTEKVLQVYNQM-KRLGCEADTITYNFLID----------------------- 365
               K  +T++   ++ +M ++       ++Y  LID                       
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490

Query: 366 ---CH---------CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
              CH          K G++ +A K++  MV+ G NP+   ++ +   +     V+ A  
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 550

Query: 414 MYGKMKDLKCEPNTVTYNILMQMF-ATSKSTDM 445
           ++ +M    C PN VTY +L + F A  ++ D+
Sbjct: 551 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 583



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 22/256 (8%)

Query: 113 RHV----IEKSCG---VRHGIPLLQVLSFFNWVTARPEFVH-------SPD--LYHEMIN 156
           RHV    IEK C    + +G  ++Q  S    V A  E +         PD   Y+ +++
Sbjct: 338 RHVFDSMIEKGCAPDALTYGT-IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 396

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYGCA 215
              K+ + D A+   D M +  ++    TF++L+    + G    A   F  M E+    
Sbjct: 397 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP 456

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
           P  ++++I+I  L +  R SEA   F  + D+   P+   YT+L+    +AG I EA+++
Sbjct: 457 PTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 516

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             +M   G+ P+V  YS +I  L     +  A DVF EM++ GC PN +T+  L R    
Sbjct: 517 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRA 576

Query: 335 ASRT---EKVLQVYNQ 347
           A R    E V Q ++Q
Sbjct: 577 AGRALDLEAVKQHFSQ 592



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 5/213 (2%)

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           +GCEP  +++N ++       + ++  + +N M   GCE D I +  LI   CK G+ + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
             K+LN  +++   P+   +  +     K GD++     Y +    K   + ++Y  +++
Sbjct: 61  GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIK 116

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
             A SK  D   +L +E++     PNV  Y  +I      G   +  K   EM    C+ 
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV- 175

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           P  + Y +V+  L +A  L    ++ E+MV +G
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 208


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 199/404 (49%), Gaps = 4/404 (0%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           ++FF W  ++  + H    Y+ ++ +  K  + D  +   + M +        T+  L+R
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEP 250
              +A    EA   F  M   GC+P+  ++SI+I+ LCR ++  EA    + + D   +P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V+ Y +L+ G C+ G + EA  +F  M   G  P+   Y+++ID   + G +  A+ +F
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EMLE GC P   T+N+L+    +     +V  ++  M R GC  +  T+N L+D  CK 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G + +A ++   M   GC P+  ++N + R +   G  + A R+  +M      P+ V+Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           NIL+  ++ S + D  +KL  E+ ++ +EP+  +Y  +I   C  G    A+   ++MI 
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
                  + V  +V+  L R  +L +  EL + MV   F   PL
Sbjct: 361 NGSAPDAAVVIPLVI-GLCRGERLTESCELFQAMVK--FECVPL 401



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 168/361 (46%), Gaps = 38/361 (10%)

Query: 147 SPDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP+++   I +AG  R  + D A   ++ M     +  V T+  L+    + G   EAV 
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F+RM   GC PD + ++++I    +K    EA   F+ + +K   P V  Y +L+ G+ 
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS 203

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R G     + +F++M   G  PN++T++ ++D  C+ G +  AH +F EM  +GC P+ +
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++N L+R      +  +  ++  +M R G   D ++YN LID + K G L+ AIK+   +
Sbjct: 264 SYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAH------------------------------- 412
            + G  P+A +++ I  C+ + G V  A                                
Sbjct: 324 PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERL 383

Query: 413 ----RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
                ++  M   +C P    YN+LM     +K +D V ++  E+ E    P+V   +++
Sbjct: 384 TESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443

Query: 469 I 469
           +
Sbjct: 444 L 444



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 123/244 (50%), Gaps = 2/244 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F D+++   V   + TF+ L+  + + G   EA   F  M   GC PD ++++ +I  +C
Sbjct: 215 FKDMLRQGCVP-NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273

Query: 230 RKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            K +  EAQ    + ++    PD++ Y  L+ G+ ++G +  A ++F E+  +G++P+ +
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +YS +ID LCR G++  A  VF +M+  G  P++     L+    +  R  +  +++  M
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            +  C      YN L+   CK  + +D  ++ + +  +G +P+     +I   + +  D 
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDK 453

Query: 409 NGAH 412
           + A 
Sbjct: 454 DAAE 457


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 197/435 (45%), Gaps = 49/435 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV     Y ++I       + + A+     MK   V   V T++IL+  + +AGL  
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A   F  M   GC+P  + ++ +I    + ++  +A   F  + D    P+ + Y  LV
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 400

Query: 260 RGWCRAGNISEAERVFREMKMAG----------------IQPNVYTYSIVIDALCRCGQI 303
            G C+AGNIS+A  V+ ++                    + PNV TY  ++D LC+  ++
Sbjct: 401 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKV 460

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             AH++   ML  GCEPN I ++ L+    KA + +   +V+ QM + G      TY  L
Sbjct: 461 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 520

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID   KDG+L+ A+KVL+ M++  C PN  T+  +   + ++G+   A ++   M++  C
Sbjct: 521 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 580

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN VTY  L+     +   D+ L L  +M      PN  TYR+LI   C  G  + A  
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARL 640

Query: 484 YIREM--------------------------------IEEKCLKPGSSVYEMVLQQLRRA 511
            + EM                                +E     P + VY M++    +A
Sbjct: 641 LLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKA 700

Query: 512 GQLQKHEELVEKMVD 526
           G+L+   EL ++M++
Sbjct: 701 GRLEIAMELHKEMME 715



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 175/382 (45%), Gaps = 18/382 (4%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            DLA      M + N  +     +   R     G   +A      M   G  PD   +S 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           VI+ LC   +  +A   F  +K     PDV  YT L+  +C+AG I +A+ +F EM+  G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P V TY+ +I A  +  Q+ +A+D+F  M++ GC PN +T+  L+    KA    K  
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 343 QVYNQMKRLGCEADT----------------ITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +VY ++      AD+                +TY  L+D  CK  K++ A ++L++M+  
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC PN   ++ +     K G ++ A  ++ +M      P+  TY  L+         D+ 
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +K+  +M ++   PNV TY  +I   C +G    A K +  ++EEK   P    Y  ++ 
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL-SLMEEKGCSPNVVTYTALID 592

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L +AG++    +L  +M  +G
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKG 614



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 164/392 (41%), Gaps = 49/392 (12%)

Query: 157 LAGKVRQFDLAW--HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L+G +++  L W    I++M +         F+ LV  Y      A A    NRM   GC
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
            P  + ++I I  +C + +                PD++                 AE++
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPS-------------PDLL---------------DLAEKI 240

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           + EM  A    N    +     LC  G+  +A  +  EM+  G  P++ T++ ++     
Sbjct: 241 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 300

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A++ EK   ++ +MK +G   D  TY  LID  CK G +E A  +   M   GC+P   T
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-----------------QMF 437
           +  +     K   V  A+ ++ +M D  C PN VTY  L+                 ++ 
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
            TS S D       E + + + PNV TY  L+   C     ++A++ +  M+   C +P 
Sbjct: 421 GTSDSADSDFYFPCE-DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC-EPN 478

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             VY+ ++    +AG++   +E+  +M   G+
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 23/302 (7%)

Query: 242 DSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           D LKD  + P  + Y  LV+    AG +    RV +EM  +G   + +T      ALC+ 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVH-----VKASRTEKVLQVYNQMKRLGCEA 355
           G+   A D+         E      + ++  H     ++AS  ++ +   ++M+   C  
Sbjct: 89  GRWADALDMI--------EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 140

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           + +TY  L+    K  +L    +++N M+ +GCNPN S FN +        D   A+++ 
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200

Query: 416 GKMKDLKCEPNTVTYNILM------QMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRIL 468
            +M    C P  V YNI +      +   +    D+  K+  EM   N V   VN     
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + CG+G ++ A++ I+EM+  K   P +S Y  V+  L  A +++K   L ++M   G
Sbjct: 261 RCL-CGVGKFDKAFQLIKEMM-RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 318

Query: 529 FT 530
            T
Sbjct: 319 VT 320



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 36/287 (12%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  + D A      M       +V T++ L+ R  + G    A+   ++M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            +  C P+ + ++ +I  LCR   + +A      +++K   P+V+ YT L+ G  +AG I
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV------------ 316
             +  +F +M   G  PN  TY ++I+ LC  G + +A  +  EM +             
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660

Query: 317 ---------------------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL--GC 353
                                G  P +  +  L+    KA R E  ++++ +M  +    
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 720

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           + D   Y  LI   C   ++E+A ++ + M R+G  P  S F  + +
Sbjct: 721 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIK 767



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 36/230 (15%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MI+   ++ + + A   + LM+ +     V T++ L+    +AG    ++  F +M 
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI----------------- 253
             GC+P+ + + ++I+ LC      +A+     +K  + P  +                 
Sbjct: 612 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS 671

Query: 254 -----------------VYTNLVRGWCRAGNISEAERVFREMKM--AGIQPNVYTYSIVI 294
                            VY  L+  + +AG +  A  + +EM    + ++ +   Y+ +I
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLI 731

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
            ALC   Q+  A  +++EM   G  P    F  L++  V+  + ++ LQ+
Sbjct: 732 QALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 202/390 (51%), Gaps = 6/390 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +I+   K ++ D A      M  + V+    T++ ++    +A     A  
Sbjct: 222 SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEG 281

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F +M + G  P  + ++ +I  LC+ +    A+  F  + D+  +PD + Y  ++ G C
Sbjct: 282 VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A  I +AE VF++M   G++P+  TY+I+ID LC+   + RA  VF +M++ G +PN+ 
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+  ++   + E+V+Q   +M     E D  TY  L+D  CK+GK  +A  + +SM
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +RKG  P+ + + ++     K G ++  H +   M      PN   +N ++  +A     
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D V+ +  +M++  + PNV TY  LI   C +G  ++A     +MI E  + P + V+  
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG-VTPNNVVFNS 580

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           ++  L    + +K EEL  +M+++G   RP
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGI--RP 608



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 182/336 (54%), Gaps = 3/336 (0%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV 254
           RA  A E +H     ++  C+PD ++++IVI+    + +  +A S F  L+    PDV+ 
Sbjct: 170 RAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF--LEMGVSPDVVT 227

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           Y  ++ G C+A  +  AE VF++M   G++PN  TY+ +ID LC+  ++  A  VF +M+
Sbjct: 228 YNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMV 287

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           + G +P+++T+N ++    KA   ++   V+ QM   G + D +TYN +ID  CK   ++
Sbjct: 288 DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAID 347

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A  V   M+ KG  P+  T+ +I   + K   V+ A  ++ +M D   +PN  TYN L+
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
             + ++   + V++  KEM  +++EP+V TY +L+   C  G  N A      MI  K +
Sbjct: 408 HGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMI-RKGI 466

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           KP  ++Y ++L    + G L +  +L+  MV  G +
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGIS 502



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 190/446 (42%), Gaps = 72/446 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K +  D A      M  R V+    T++ ++    +A    +A   F +M 
Sbjct: 298 YNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI 357

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD + ++I+I  LC+ +    A+  F  + DK  +P+   Y  L+ G+   G   
Sbjct: 358 DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWE 417

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA----------------------- 306
           E  +  +EM    ++P+V+TY +++D LC+ G+   A                       
Sbjct: 418 EVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477

Query: 307 ------------HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
                       HD+   M+  G  PN   FN ++  + K +  ++V+ ++ +MK+ G  
Sbjct: 478 HGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLS 537

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST-------------------- 394
            + +TY  LID  CK G+++DA+   N M+ +G  PN                       
Sbjct: 538 PNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEEL 597

Query: 395 ---------------FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
                          FN +   + K G V  A R+   M  +  +P+ ++YN L+     
Sbjct: 598 FLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCF 657

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +   D  +KL   M    ++PN+ +Y  L+  YC  G  +NAY   REM+  K + PG  
Sbjct: 658 ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML-RKGVTPGVE 716

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMV 525
            Y  +L  L R+G+  +  EL   M+
Sbjct: 717 TYNTILNGLFRSGRFSEARELYVNMI 742



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 186/383 (48%), Gaps = 2/383 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S  +Y  M++  GK          ++LM +  +      F+ ++  Y +  +  E +H F
Sbjct: 469 SVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIF 528

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRA 265
            +M++ G +P+ + +  +I  LC+  R  +A   F+ +  +   P+ +V+ +LV G C  
Sbjct: 529 IKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTV 588

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
               + E +F EM   GI+P++  ++ V+  LC+ G++  A  +   M+ +G +P+ I++
Sbjct: 589 DKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISY 648

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+  H  ASR ++ +++ + M   G + + ++YN L+  +CK G++++A  +   M+R
Sbjct: 649 NTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLR 708

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  P   T+N I   + + G  + A  +Y  M   +   +  TY+I++  F  +   D 
Sbjct: 709 KGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDE 768

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             K+ + +   +++ ++ T+ I+I      G   +A       I    L P    Y ++ 
Sbjct: 769 AFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLF-AAIPANGLVPSVVTYRLIA 827

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
           + L   G L++ + L   M   G
Sbjct: 828 ENLIEEGSLEELDCLFSVMEKSG 850



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 175/380 (46%), Gaps = 36/380 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K +  D A      M  + V+    T++ L+  Y+  G   E V     M 
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            +   PD   + +++  LC+  + +EA+S FDS+ +   +P V +Y  ++ G+ + G +S
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487

Query: 270 E---------------------------AER--------VFREMKMAGIQPNVYTYSIVI 294
           E                           A+R        +F +MK  G+ PNV TY  +I
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           DALC+ G++  A   F +M+  G  PN++ FN+L+       + EKV +++ +M   G  
Sbjct: 548 DALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIR 607

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D + +N ++   CK+G++ +A ++++SMV  G  P+  ++N +         ++ A ++
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
              M     +PN V+YN L+  +  +   D    L +EM    V P V TY  ++     
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727

Query: 475 MGHWNNAYKYIREMIEEKCL 494
            G ++ A +    MI+ + L
Sbjct: 728 SGRFSEARELYVNMIKSRKL 747



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 164/335 (48%), Gaps = 12/335 (3%)

Query: 202 AVHAFNRMEE---YGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTN 257
           AV  FNRM        APD   +SIVI   CR  R     + F   LK  +  D IV   
Sbjct: 65  AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQ 124

Query: 258 LVRGWCRAGNISEAERV-FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-- 314
           L++G C    + EA  V  R+M   G +  V +Y+ ++  LC   +   A ++   M+  
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 315 -EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            +  C P+ +++N ++       + +K   ++ +M   G   D +TYN +ID  CK  ++
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEV 241

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A  V   MV KG  PN  T+N I   + K  +V+ A  ++ KM D   +P+ VTYN +
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +     +++ D    + ++M +  V+P+  TY  +I   C     + A    ++MI +K 
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI-DKG 360

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +KP +  Y +++  L +A  + + E + ++M+D+G
Sbjct: 361 VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKG 395



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 203/493 (41%), Gaps = 54/493 (10%)

Query: 81  SNPSLNPDFTIPSLSLGF----SQISTAHSISPSTVRHVIEKSCGVR----HGIPLLQVL 132
           S   L PD     L L +     + + A S+  S +R  I+ S  +     HG      L
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486

Query: 133 S----FFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           S      N + A      SP+  +++ +I    K    D   H    MK + +   V T+
Sbjct: 487 SEMHDLLNLMVANG---ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTY 543

Query: 187 SILVRRYVRAGLAAEAVHAFNRM----------------------------EEY------ 212
             L+    + G   +AV  FN+M                            EE       
Sbjct: 544 GTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLN 603

Query: 213 -GCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISE 270
            G  PD + F+ V+  LC++ R  EA+   DS+     +PDVI Y  L+ G C A  + E
Sbjct: 604 QGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDE 663

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A ++   M  AG++PN+ +Y+ ++   C+ G+I  A+ +F EML  G  P   T+N ++ 
Sbjct: 664 AVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILN 723

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              ++ R  +  ++Y  M +        TY+ ++D  CK+   ++A K+  S+       
Sbjct: 724 GLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQL 783

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +  TFN++   + K G    A  ++  +      P+ VTY ++ +      S + +  L 
Sbjct: 784 DIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLF 843

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
             ME++   PN +    LI      G    A  Y+ ++ +EK     +S   M++    R
Sbjct: 844 SVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKL-DEKNFSLEASTTSMLISLFSR 902

Query: 511 AGQLQKHEELVEK 523
               Q  + L EK
Sbjct: 903 EEYQQHAKSLPEK 915


>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 198/371 (53%), Gaps = 7/371 (1%)

Query: 158 AGKVRQFDLAWHFI-DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           A   +QF L W F+ D+ ++R  EI  + F ++ R Y RA L  +A+ AF++M ++G   
Sbjct: 97  AHSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKA 156

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
                  ++ +LC+++   +AQ FFD +  +  P+   Y+ L+RGW   G+ SEA ++F 
Sbjct: 157 GVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFE 216

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EM+  G   +V  Y+ +++ALC+ G +  A+ +F EM   G  P++ +++  +R + + +
Sbjct: 217 EMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVN 276

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
                 QV ++M+R     +  TYN ++   CK  K+++A ++L+ M+ +G +P+  ++N
Sbjct: 277 DIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYN 336

Query: 397 MI--FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
            I  F C     +VN A R+  +M+   C P+  TYN++++M       D V  +   ME
Sbjct: 337 AIQAFHC--DHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGME 394

Query: 455 ENEVEPNVNTYRILITMYC-GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           E    P  +TY +++  +C   G    A KY   MI++  + P S   E++  ++   G 
Sbjct: 395 ERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDG-IPPYSCTVELLRNRVIGLGF 453

Query: 514 LQKHEELVEKM 524
            ++ + L  KM
Sbjct: 454 SEQIDVLAGKM 464



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 2/276 (0%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           ++  + R +CRA    +A R F +M   G++  V     ++  LC+   + +A + F + 
Sbjct: 125 IFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFF-DK 183

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + V   PN+ T++ LMR       + +  +++ +M+  GC  D + YN L++  CK G +
Sbjct: 184 VNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNV 243

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           ++A K+   M   G  P+A ++++  R   ++ D++ A ++  +M+     PN  TYN +
Sbjct: 244 DEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCI 303

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++    S+  D   +L  EM E  V P++ +Y  +   +C     N A + I  M +E C
Sbjct: 304 VKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENC 363

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + P    Y MVL+ L R G+  +  ++   M +RGF
Sbjct: 364 M-PDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGF 398



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 4/292 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           Q   FF+ V    E + +   Y  ++   G V     A    + M+ R   + V  ++ L
Sbjct: 176 QAQEFFDKVNV--EVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSL 233

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KF 248
           +    + G   EA   F  M   G APD  ++SI I   C       A    D ++    
Sbjct: 234 LEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNL 293

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P+V  Y  +V+  C++  + EA ++  EM   G+ P++++Y+ +    C   ++ +A  
Sbjct: 294 VPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALR 353

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           + + M +  C P+  T+N ++++ ++  R ++V  V+  M+  G      TY  ++   C
Sbjct: 354 LISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFC 413

Query: 369 -KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
            K GKLE+A K    M+  G  P + T  ++   +  LG       + GKM+
Sbjct: 414 KKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKME 465


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 198/404 (49%), Gaps = 4/404 (0%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           ++FF W  ++  + H    Y+ ++ +  K  + D  +   + M          T+  L+R
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEP 250
              +A    EA   F  M   GC+P+  ++SI+I+ LCR ++  EA    + + D   +P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V+ Y +L+ G C+ G + EA  +F  M   G  P+   Y+++ID   + G +  A+ +F
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EMLE GC P   T+N+L+    +     +V  ++  M R GC  +  T+N L+D  CK 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G + +A ++   M   GC P+  ++N + R +   G  + A R+  +M      P+ V+Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           NIL+  ++ S + D  +KL  E+ ++ +EP+  +Y  +I   C  G    A+   ++MI 
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
                  + V  +V+  L R  +L +  EL + MV   F   PL
Sbjct: 361 NGSAPDAAVVIPLVI-GLCRGERLTESCELFQAMVK--FECVPL 401



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 168/361 (46%), Gaps = 38/361 (10%)

Query: 147 SPDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP+++   I +AG  R  + D A   ++ M     +  V T+  L+    + G   EAV 
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F+RM   GC PD + ++++I    +K    EA   F+ + +K   P V  Y +L+ G+ 
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS 203

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R G     + +F++M   G  PN++T++ ++D  C+ G +  AH +F EM  +GC P+ +
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++N LMR      +  +  ++  +M R G   D ++YN LID + K G L+ AIK+   +
Sbjct: 264 SYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAH------------------------------- 412
            + G  P+A +++ I  C+ + G V  A                                
Sbjct: 324 PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERL 383

Query: 413 ----RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
                ++  M   +C P    YN+LM     +K +D V ++  E+ E    P+V   +++
Sbjct: 384 TESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443

Query: 469 I 469
           +
Sbjct: 444 L 444



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 122/244 (50%), Gaps = 2/244 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F D+++   V   + TF+ L+  + + G   EA   F  M   GC PD ++++ ++  +C
Sbjct: 215 FKDMLRQGCVP-NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273

Query: 230 RKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            K +  EAQ    + ++    PD++ Y  L+ G+ ++G +  A ++F E+  +G++P+ +
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +YS +ID LCR G++  A  VF +M+  G  P++     L+    +  R  +  +++  M
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            +  C      YN L+   CK  + +D  ++ + +  +G +P+     +I   + +  D 
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDK 453

Query: 409 NGAH 412
             A 
Sbjct: 454 EAAE 457


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 196/384 (51%), Gaps = 4/384 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y     I    K R FD A    + M+ R+  +   T+++++    R+G   EA   
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 300

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
              M +YG +PD   +  +++ LC+  R  EA++  D +     +P+++VY  LV G+ +
Sbjct: 301 KEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMK 360

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G  +EA  + +EM  AG+QPN   Y  +I  LC+ GQ+ RA  +  EM++VG  P++ T
Sbjct: 361 EGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFT 420

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N LM+ H +    +   ++ N+M+  G   +  +Y  +I+  C++G+ ++A  +L  M+
Sbjct: 421 YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMI 480

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  PNA  +  +    SK G+++ A     KM      P+   YN L++  +T    +
Sbjct: 481 SEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRME 540

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              +   ++++  + P+  TY  LI  YC  G+   A + +R+M+    LKP +  Y  +
Sbjct: 541 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG-LKPNADTYTDL 599

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           L+   ++   +K   +++ M+  G
Sbjct: 600 LEGYFKSNDYEKVSSILQSMLGSG 623



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 165/356 (46%), Gaps = 10/356 (2%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           +SR+   +     +LV  Y + G    A      M + G AP +   + ++  L R    
Sbjct: 165 RSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR---- 220

Query: 235 SEAQSFFDSLKDKFE-----PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           ++A      LK   E     PDV  Y+  +   C+A +   A++VF EM+      N  T
Sbjct: 221 ADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVT 280

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+++I  LCR G +  A     EM++ G  P++ T+  LM    K SR ++   + ++M 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G + + + Y  L+D   K+GK  +A  +L  M+  G  PN   ++ + R + K+G + 
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A ++  +M  +   P+T TYN LMQ        D   +L  EM  + + PNV +Y I+I
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
              C  G    A   + EMI E  LKP + +Y  ++    + G +    E +EKM 
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEG-LKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 185/434 (42%), Gaps = 39/434 (8%)

Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F +     ++  SPD   Y  ++N   K  +   A   +D M    ++  +  +  LV  
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-------- 244
           +++ G  AEA      M   G  P+KI +  +I  LC+  +   A      +        
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417

Query: 245 ----------------KD-KFE-----------PDVIVYTNLVRGWCRAGNISEAERVFR 276
                           KD  FE           P+V  Y  ++ G C+ G   EA  +  
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EM   G++PN + Y+ +I    + G I+ A +   +M +    P+   +N+L++      
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           R E+  + Y Q+++ G   D  TY+ LI  +CK G LE A ++L  M+  G  PNA T+ 
Sbjct: 538 RMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +     K  D      +   M     +P+   Y I+++  + S++ ++   +  E+E+N
Sbjct: 598 DLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 657

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P+++ Y  LI+  C +     A   + EM +E  L+PG   Y  ++    R+G + +
Sbjct: 658 GLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG-LEPGIVCYNALIDGFCRSGDISR 716

Query: 517 HEELVEKMVDRGFT 530
              + + ++ +G  
Sbjct: 717 ARNVFDSILAKGLV 730



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 177/386 (45%), Gaps = 4/386 (1%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD +     + G  +Q D   A+  ++ M++  +   V ++ I++    + G + EA + 
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
              M   G  P+   ++ +I    ++   S A    + + K    PD+  Y +L++G   
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST 535

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE  + +++  G+ P+ +TYS +I   C+ G + +A  +  +ML  G +PN+ T
Sbjct: 536 VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+  + K++  EKV  +   M   G + D   Y  +I    +   +E A  VL  + 
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 655

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           + G  P+   ++ +   + K+ D+  A  +  +M     EP  V YN L+  F  S    
Sbjct: 656 KNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 715

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               +   +    + PN  TY  LI   C  G   +A+   +EM+ ++ + P + VY ++
Sbjct: 716 RARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEML-DRGIAPDAFVYNVL 774

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
                 A  L++   L E+M +RG+ 
Sbjct: 775 ATGCSDAADLEQALFLTEEMFNRGYA 800



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 172/378 (45%), Gaps = 3/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MIN   +  +   A + ++ M S  ++     ++ L+  + + G  + A  A  +M 
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    PD   ++ +I  L    R  EA+ ++  ++ +   PD   Y+ L+ G+C+ GN+ 
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A+++ R+M  +G++PN  TY+ +++   +     +   +   ML  G +P++  +  ++
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVI 635

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           R   ++   E    V  ++++ G   D   Y+ LI   CK   +E A+ +L+ M ++G  
Sbjct: 636 RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLE 695

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P    +N +     + GD++ A  ++  +      PN VTY  L+     +        L
Sbjct: 696 PGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDL 755

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEM +  + P+   Y +L T          A     EM          S++  ++    
Sbjct: 756 YKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG--YANVSLFNTLVHGFC 813

Query: 510 RAGQLQKHEELVEKMVDR 527
           + G+LQ+ E+L+  M+DR
Sbjct: 814 KRGKLQETEKLLHVMMDR 831



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 124/238 (52%), Gaps = 2/238 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           + I++R   R+     A      +E+ G  PD   +S +IS LC+     +A    D + 
Sbjct: 631 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K+  EP ++ Y  L+ G+CR+G+IS A  VF  +   G+ PN  TY+ +ID  C+ G IT
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A D++ EML+ G  P++  +N L      A+  E+ L +  +M   G  A+   +N L+
Sbjct: 751 DAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YANVSLFNTLV 809

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
              CK GKL++  K+L+ M+ +   PNA T   +     K G +  AHR++ +++  K
Sbjct: 810 HGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKK 867



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 137/322 (42%), Gaps = 3/322 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K    + A   +  M +  ++   DT++ L+  Y ++    +       M 
Sbjct: 561 YSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSML 620

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   + IVI  L R      A      + K+   PD+ +Y++L+ G C+  ++ 
Sbjct: 621 GSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADME 680

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +  EM   G++P +  Y+ +ID  CR G I+RA +VF  +L  G  PN +T+  L+
Sbjct: 681 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALI 740

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K         +Y +M   G   D   YN L         LE A+ +   M  +G  
Sbjct: 741 DGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-Y 799

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N S FN +     K G +    ++   M D +  PN  T   ++  F  +       ++
Sbjct: 800 ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRV 859

Query: 450 KKEMEENEV-EPNVNTYRILIT 470
             E+++ +  +   + + +L T
Sbjct: 860 FAELQQKKASQSATDRFSLLFT 881



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 1/142 (0%)

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +P+ +  +++     K G V  A ++   M DL   P     N L++    + + +++ K
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           LK  ME   + P+V TY   I  +C    ++ A K   EM    C       Y +++  L
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAM-NEVTYNVMISGL 288

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            R+G +++     E+MVD G +
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLS 310


>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
 gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
 gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 500

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 193/383 (50%), Gaps = 5/383 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF W  +R ++ H+    + M++L GK+RQ D  W  +  M  R + +TV+T +  +R
Sbjct: 100 LGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGL-VTVETVAKSIR 158

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           R   A    + V  F+++E+ G   +    ++++ +LC++R+   A+  F  L     PD
Sbjct: 159 RLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPD 218

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              +   V GWC    I EA     EMK  G  P+V TY+ V++A C+     R ++V  
Sbjct: 219 AYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLD 278

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
            M   GC PN IT+  +M    K  R E+ L V ++MK  GC+ DT+ YN LI+   K G
Sbjct: 279 SMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSG 338

Query: 372 KLEDAIKVLN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            L +A +V    M   G + N +T+N +       G  + A  +  +M+   C+P+  +Y
Sbjct: 339 HLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSY 398

Query: 431 NILMQMFATSKS-TDMVLKLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             L+++F + +   D V  L  E+  ++ +  +++TY +LI   C +G    AY+   EM
Sbjct: 399 RPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEM 458

Query: 489 IEEKCLKPGSSVYEMVLQQLRRA 511
           +  + + P S    M+L + +R 
Sbjct: 459 VSSE-IAPRSKTCVMLLDEAQRT 480



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 129/256 (50%), Gaps = 4/256 (1%)

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +F +++  G++ N  T ++++D LC+  +I  A +VFA +L     P++ TFN  +    
Sbjct: 172 LFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFA-VLSPHIPPDAYTFNIFVHGWC 230

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
              R ++ +    +MKR G     ITY  +++ +CK        +VL+SM  +GC+PN  
Sbjct: 231 SIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVI 290

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST-DMVLKLKKE 452
           T+ MI   ++K      A  +  +MK   C+P+T+ YN L+ +   S    +     + E
Sbjct: 291 TYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVE 350

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ-LRRA 511
           M  N V  N+ TY  +I+++C  G  ++A   ++EM  + C KP    Y  +L+  L R 
Sbjct: 351 MPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSC-KPDIQSYRPLLRLFLSRR 409

Query: 512 GQLQKHEELVEKMVDR 527
           GQ      L+ ++  +
Sbjct: 410 GQADTVRHLLSELTSK 425



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 97/251 (38%), Gaps = 39/251 (15%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  F  S   Y  ++    K R F   +  +D M S+     V T+++++    +     
Sbjct: 247 RRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFE 306

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNL 258
           EA+   +RM+  GC PD + ++ +I++L +     EA   F  +   +    ++  Y  +
Sbjct: 307 EALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTM 366

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVY------------------------------ 288
           +  +C  G   +A  V +EM+    +P++                               
Sbjct: 367 ISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKH 426

Query: 289 -------TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
                  TY+++I  LCR G    A+ +F EM+     P S T   L+    + +    V
Sbjct: 427 NLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLDEAQRTNMETYV 486

Query: 342 LQVYNQMKRLG 352
            ++ N M   G
Sbjct: 487 ERIGNYMSSFG 497


>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Glycine max]
          Length = 648

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 14/422 (3%)

Query: 115 VIEKSCGVRHG----IPLLQ--------VLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           V+   CGVR      + +LQ           FF W   RP F H    Y+ M+ + G+ R
Sbjct: 193 VVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTR 252

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           QF+     ++ M  + + +T++TFSI ++ +  A    +AV  F+ M++YG        +
Sbjct: 253 QFETMVAMLEEMGEKGL-LTMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVIN 311

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
            ++  L   +   EAQ+ F+ LKD+F P +  YT L+ GWCR  N+ EA RV+ EM   G
Sbjct: 312 FLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRG 371

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P+V  ++++++ L +C + + A  +F  M   G  PN  ++  +++   K     + +
Sbjct: 372 FNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAI 431

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           + ++ M   GC+ D   Y  LI    +  K++    +L  M  +GC P+  T+N + + +
Sbjct: 432 EYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLM 491

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           +     + A R+Y KM     +P   TYN++M+ +  +K+ +M  ++  EM +    P+ 
Sbjct: 492 TSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDD 551

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           N+Y + I           A KY+ EM+ EK +K     Y      + + G     EEL  
Sbjct: 552 NSYIVYIGGLIRQDRSGEACKYLEEML-EKGMKAPKLDYNKFASDISKTGNAVILEELAR 610

Query: 523 KM 524
           KM
Sbjct: 611 KM 612


>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 454

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 193/383 (50%), Gaps = 5/383 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF W  +R ++ H+    + M++L GK+RQ D  W  +  M  R + +TV+T +  +R
Sbjct: 54  LGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGL-VTVETVAKSIR 112

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           R   A    + V  F+++E+ G   +    ++++ +LC++R+   A+  F  L     PD
Sbjct: 113 RLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPD 172

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              +   V GWC    I EA     EMK  G  P+V TY+ V++A C+     R ++V  
Sbjct: 173 AYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLD 232

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
            M   GC PN IT+  +M    K  R E+ L V ++MK  GC+ DT+ YN LI+   K G
Sbjct: 233 SMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSG 292

Query: 372 KLEDAIKVLN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            L +A +V    M   G + N +T+N +       G  + A  +  +M+   C+P+  +Y
Sbjct: 293 HLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSY 352

Query: 431 NILMQMFATSKS-TDMVLKLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             L+++F + +   D V  L  E+  ++ +  +++TY +LI   C +G    AY+   EM
Sbjct: 353 RPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEM 412

Query: 489 IEEKCLKPGSSVYEMVLQQLRRA 511
           +  + + P S    M+L + +R 
Sbjct: 413 VSSE-IAPRSKTCVMLLDEAQRT 434



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           ++ +L + R+  +       +  +    V      +R    A    +   +F +++  G+
Sbjct: 76  MVDLLGKMRQIDQMWELLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGL 135

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           + N  T ++++D LC+  +I  A +VFA +L     P++ TFN  +       R ++ + 
Sbjct: 136 ERNTETMNVLLDVLCKERKIEVAREVFA-VLSPHIPPDAYTFNIFVHGWCSIRRIDEAMW 194

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
              +MKR G     ITY  +++ +CK        +VL+SM  +GC+PN  T+ MI   ++
Sbjct: 195 TIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLA 254

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST-DMVLKLKKEMEENEVEPNV 462
           K      A  +  +MK   C+P+T+ YN L+ +   S    +     + EM  N V  N+
Sbjct: 255 KCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNL 314

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ-LRRAGQLQKHEELV 521
            TY  +I+++C  G  ++A   ++EM  + C KP    Y  +L+  L R GQ      L+
Sbjct: 315 ATYNTMISIFCYYGRDDDALNVLKEMEAQSC-KPDIQSYRPLLRLFLSRRGQADTVRHLL 373

Query: 522 EKMVDR 527
            ++  +
Sbjct: 374 SELTSK 379



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 97/251 (38%), Gaps = 39/251 (15%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  F  S   Y  ++    K R F   +  +D M S+     V T+++++    +     
Sbjct: 201 RRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFE 260

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNL 258
           EA+   +RM+  GC PD + ++ +I++L +     EA   F  +   +    ++  Y  +
Sbjct: 261 EALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTM 320

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVY------------------------------ 288
           +  +C  G   +A  V +EM+    +P++                               
Sbjct: 321 ISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKH 380

Query: 289 -------TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
                  TY+++I  LCR G    A+ +F EM+     P S T   L+    + +    V
Sbjct: 381 NLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLDEAQRTNMETYV 440

Query: 342 LQVYNQMKRLG 352
            ++ N M   G
Sbjct: 441 ERIGNYMSSFG 451


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 211/439 (48%), Gaps = 45/439 (10%)

Query: 133 SFFNWV--TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           SF+  V    RP  V     + + +    K +Q+  A    + M    V   V + ++L+
Sbjct: 83  SFYRMVRMNPRPSVVE----FGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLI 138

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFE 249
               R      AV    +M + G  PD I F+ +I+ LC + +  EA   F+ +     E
Sbjct: 139 NCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE 198

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+VI Y  ++ G C+ GN   A RVFR+M+    +PNV TY+ +ID+LC+   +  A + 
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEF 258

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            +EM++ G  P+ +T+N ++       +  +  +++ +M       DT+T+N L+D  CK
Sbjct: 259 LSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCK 318

Query: 370 DG-----------------------------------KLEDAIKVLNSMVRKGCNPNAST 394
           +G                                   ++++AIKVL  M+ KGC PN S+
Sbjct: 319 EGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSS 378

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N++     K   +N A R+  +M +    P+TVTY+ LMQ           L L KEM 
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            + + P++  Y IL+  +C  GH + A K ++EM E + +KP   +Y ++++ +  AG+L
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR-IKPNIILYTILIRGMFIAGKL 497

Query: 515 QKHEELVEKMVDRGFTARP 533
           +  +EL  K+   G   RP
Sbjct: 498 EVAKELFSKLSADGI--RP 514



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 189/389 (48%), Gaps = 4/389 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P++  Y+ +IN   K     +A      M+    +  V T++ ++    +  L  EAV
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
              + M + G  PD + ++ ++   C   + +EA   F  +  +   PD + +  LV G 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ G +SEA  V   M   G +PN YTY+ ++D  C   Q+  A  V   M+  GC PN 
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            ++N L+  + K+ R  +  ++ ++M       DT+TY+ L+   C+ G+  +A+ +   
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   G  P+   ++++     K G ++ A ++  +M + + +PN + Y IL++    +  
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            ++  +L  ++  + + P++ TY ++I      G  + AY++ R+M E+    P S  Y 
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKM-EDDGFLPDSCSYN 555

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           +++Q   +        +L+++MV + F+A
Sbjct: 556 VIIQGFLQNQDSSTAIQLIDEMVGKRFSA 584



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 170/357 (47%), Gaps = 36/357 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K R  + A  F+  M  R +   V T++ ++  +   G   EA   F  M 
Sbjct: 239 YNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMV 298

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
                PD + F+I++  LC++   SEA+   +++ +K  EP+   Y  L+ G+C    + 
Sbjct: 299 GRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD 358

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA +V   M   G  PN+ +Y+I+I+  C+  ++  A  + +EM E    P+++T++ LM
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--- 386
           +   +  R  + L ++ +M   G   D + Y+ L+D  CK G L++A+K+L  M  +   
Sbjct: 419 QGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 478

Query: 387 --------------------------------GCNPNASTFNMIFRCISKLGDVNGAHRM 414
                                           G  P+  T+N++ + + K G  + A+  
Sbjct: 479 PNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEF 538

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           + KM+D    P++ +YN+++Q F  ++ +   ++L  EM       + +T+++L+ +
Sbjct: 539 FRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 131/262 (50%), Gaps = 1/262 (0%)

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
           +I +A   F  M     +P+V  +   + ++ +  Q + A  +  +M   G   N  + N
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    + S  +  + V  +M +LG + D IT+N LI+  C +GK+++A+ + N MV  
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN  ++N +   + K G+   A R++ KM+  + +PN VTYN ++      +  +  
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           ++   EM +  + P+V TY  ++  +C +G  N A +  +EM+    + P +  + +++ 
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVM-PDTVTFNILVD 314

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L + G + +   + E M ++G
Sbjct: 315 GLCKEGMVSEARCVSETMTEKG 336



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 122/227 (53%), Gaps = 3/227 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +P+L  Y+ +IN   K ++ + A   +  M  +N+     T+S L++   + G   EA++
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F  M   G  PD +A+SI++   C+     EA      + ++  +P++I+YT L+RG  
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AG +  A+ +F ++   GI+P+++TY+++I  L + G    A++ F +M + G  P+S 
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSC 552

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           ++N +++  ++   +   +Q+ ++M      AD+ T+  L+D    D
Sbjct: 553 SYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHD 599


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 187/351 (53%), Gaps = 2/351 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++IL+          +A+   + M   GC PD + ++++++ +C++ R  EA  F +
Sbjct: 16  VITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLN 75

Query: 243 SLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           S+     +P+VI +  ++R  C  G   +AE++  EM   G  P+V T++I+I+ LCR G
Sbjct: 76  SMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKG 135

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            + RA D+  +M   GC PNS+++N L+    K  + ++ +Q    M   GC  D +TYN
Sbjct: 136 LLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYN 195

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            ++   CKDGK++ A+++LN +  KGC+P   T+N +   +SK+G  + A  +  +M+  
Sbjct: 196 TMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGK 255

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +P+ +TY+ L+   +     +  +K   ++E   V+PN  TY  ++   C     + A
Sbjct: 256 GLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRA 315

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
             ++  MI + C KP    Y ++++ +   G  ++  EL+ ++  RG   +
Sbjct: 316 IDFLAYMISKGC-KPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKK 365



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 163/340 (47%), Gaps = 5/340 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +IE +C        +++L        +P+ V     Y+ ++N   K  + D A  F++ M
Sbjct: 22  LIEATCAESGVGQAMKLLDEMGSRGCKPDVVT----YNVLVNGMCKEGRLDEAIKFLNSM 77

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
            S   +  V T +I++R     G   +A      M   GC+P  + F+I+I+ LCRK   
Sbjct: 78  PSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLL 137

Query: 235 SEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             A    + +      P+ + Y  L+ G+C+   +  A +    M   G  P++ TY+ +
Sbjct: 138 GRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTM 197

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           + ALC+ G++  A ++  ++   GC P  IT+N ++    K  +T++ +++ ++M+  G 
Sbjct: 198 LTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGL 257

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           + D ITY+ LI    ++GK+E+AIK  + +   G  PNA T+N I   + K    + A  
Sbjct: 258 KPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAID 317

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
               M    C+P  V+Y IL++  A        L+L  E+
Sbjct: 318 FLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 36/320 (11%)

Query: 244 LKDKFEPDVIVYT-----------------------------------NLVRGWCRAGNI 268
           L+ +  PDVI YT                                    LV G C+ G +
Sbjct: 8   LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRL 67

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA +    M   G QPNV T++I++ ++C  G+   A  +  EM+  GC P+ +TFN L
Sbjct: 68  DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNIL 127

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +     + + +  +M   GC  ++++YN L+   CK+ K++ AI+ L  MV +GC
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +   + K G V+ A  +  ++    C P  +TYN ++   +    TD  ++
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L  EM    ++P+V TY  LI      G    A K+  + +E   +KP +  Y  ++  L
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHD-VEGFGVKPNAFTYNSIMFGL 306

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            +A Q  +  + +  M+ +G
Sbjct: 307 CKAQQTDRAIDFLAYMISKG 326



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 1/221 (0%)

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           +V    LE  C P+ IT+  L+      S   + +++ ++M   GC+ D +TYN L++  
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK+G+L++AIK LNSM   G  PN  T N+I R +   G    A ++  +M    C P+ 
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VT+NIL+            + + ++M  +   PN  +Y  L+  +C     + A +Y+  
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           M+   C  P    Y  +L  L + G++    EL+ ++  +G
Sbjct: 182 MVSRGCY-PDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 3/188 (1%)

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           ++V ++     C  D ITY  LI+  C +  +  A+K+L+ M  +GC P+  T+N++   
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDMVLKLKKEMEENEVEP 460
           + K G ++ A +    M     +PN +T+NI+++ M +T +  D   KL  EM      P
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMD-AEKLLTEMVRKGCSP 119

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +V T+ ILI   C  G    A   + +M    C  P S  Y  +L    +  ++ +  + 
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGC-TPNSLSYNPLLHGFCKEKKMDRAIQY 178

Query: 521 VEKMVDRG 528
           +E MV RG
Sbjct: 179 LEIMVSRG 186


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 198/437 (45%), Gaps = 53/437 (12%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV     Y ++I       + + A+     MK   V   V T++IL+  + +AGL  
Sbjct: 216 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 275

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A   F  M   GC+P  + ++ +I    + ++  +A   F  + D    P+ + Y  LV
Sbjct: 276 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 335

Query: 260 RGWCRAGNISEAERVFREMKMAG------------------IQPNVYTYSIVIDALCRCG 301
            G C+AGNIS+A  V+   K+ G                  + PNV TY  ++D LC+  
Sbjct: 336 DGLCKAGNISKAFEVYA--KLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 393

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  AH++   ML  GCEPN I ++ L+    KA + +   +V+ QM + G      TY 
Sbjct: 394 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 453

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID   KDG+L+ A+KVL+ M++  C PN  T+  +   + ++G+   A ++   M++ 
Sbjct: 454 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 513

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C PN VTY  L+     +   D+ L L  +M      PN  TYR+LI   C  G  + A
Sbjct: 514 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 573

Query: 482 YKYIREM--------------------------------IEEKCLKPGSSVYEMVLQQLR 509
              + EM                                +E     P + VY M++    
Sbjct: 574 RLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFS 633

Query: 510 RAGQLQKHEELVEKMVD 526
           +AG+L+   EL ++M++
Sbjct: 634 KAGRLEIAMELHKEMME 650



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 175/382 (45%), Gaps = 18/382 (4%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            DLA      M + N  +     +   R     G   +A      M   G  PD   +S 
Sbjct: 169 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           VI+ LC   +  +A   F  +K     PDV  YT L+  +C+AG I +A+ +F EM+  G
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P V TY+ +I A  +  Q+ +A+D+F  M++ GC PN +T+  L+    KA    K  
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348

Query: 343 QVYNQMKRLGCEADT----------------ITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +VY ++      AD+                +TY  L+D  CK  K++ A ++L++M+  
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC PN   ++ +     K G ++ A  ++ +M      P+  TY  L+         D+ 
Sbjct: 409 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 468

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +K+  +M ++   PNV TY  +I   C +G    A K +  ++EEK   P    Y  ++ 
Sbjct: 469 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL-SLMEEKGCSPNVVTYTALID 527

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L +AG++    +L  +M  +G
Sbjct: 528 GLGKAGKIDLSLDLFTQMSRKG 549



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 164/392 (41%), Gaps = 49/392 (12%)

Query: 157 LAGKVRQFDLAW--HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L+G +++  L W    I++M +         F+ LV  Y      A A    NRM   GC
Sbjct: 84  LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 143

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
            P  + ++I I  +C + +                PD++                 AE++
Sbjct: 144 PPGYVVYNIFIGSICGQEKLPS-------------PDLL---------------DLAEKI 175

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           + EM  A    N    +     LC  G+  +A  +  EM+  G  P++ T++ ++     
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 235

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A++ EK   ++ +MK +G   D  TY  LID  CK G +E A  +   M   GC+P   T
Sbjct: 236 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 295

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-----------------QMF 437
           +  +     K   V  A+ ++ +M D  C PN VTY  L+                 ++ 
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 355

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
            TS S D       E + + + PNV TY  L+   C     ++A++ +  M+   C +P 
Sbjct: 356 GTSDSADSDFYFPCE-DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC-EPN 413

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             VY+ ++    +AG++   +E+  +M   G+
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 445



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 36/287 (12%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  + D A      M       +V T++ L+ R  + G    A+   ++M
Sbjct: 416 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            +  C P+ + ++ +I  LCR   + +A      +++K   P+V+ YT L+ G  +AG I
Sbjct: 476 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 535

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV------------ 316
             +  +F +M   G  PN  TY ++I+ LC  G + +A  +  EM +             
Sbjct: 536 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 595

Query: 317 ---------------------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL--GC 353
                                G  P +  +  L+    KA R E  ++++ +M  +    
Sbjct: 596 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 655

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           + D   Y  LI   C   ++E+A ++ + M R+G  P  S F  + +
Sbjct: 656 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIK 702



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 36/230 (15%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MI+   ++ + + A   + LM+ +     V T++ L+    +AG    ++  F +M 
Sbjct: 487 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 546

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI----------------- 253
             GC+P+ + + ++I+ LC      +A+     +K  + P  +                 
Sbjct: 547 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS 606

Query: 254 -----------------VYTNLVRGWCRAGNISEAERVFREMKM--AGIQPNVYTYSIVI 294
                            VY  L+  + +AG +  A  + +EM    + ++ +   Y+ +I
Sbjct: 607 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLI 666

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
            ALC   Q+  A  +++EM   G  P    F  L++  V+  + ++ LQ+
Sbjct: 667 QALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 7/181 (3%)

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           DT+    +I    +    ++A+  L+ M    C PN  T+  +     K   +    R+ 
Sbjct: 41  DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 100

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             M    C PN   +N L+  +   K      KL   M      P    Y I I   CG 
Sbjct: 101 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 160

Query: 476 GH------WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                    + A K   EM+   C+    +V     + L   G+  K  +L+++M+ +GF
Sbjct: 161 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA-RCLCGVGKFDKAFQLIKEMMRKGF 219

Query: 530 T 530
            
Sbjct: 220 V 220


>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
 gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
          Length = 466

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 193/383 (50%), Gaps = 5/383 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF W  +R ++ H+    + M++L GK+RQ D  W  +  M  R + +TV+T +  +R
Sbjct: 66  LGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGL-VTVETVAKSIR 124

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           R   A    + V  F+++E+ G   +    ++++ +LC++R+   A+  F  L     PD
Sbjct: 125 RLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPD 184

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              +   V GWC    I EA     EMK  G  P+V TY+ V++A C+     R ++V  
Sbjct: 185 AYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLD 244

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
            M   GC PN IT+  +M    K  R E+ L V ++MK  GC+ DT+ YN LI+   K G
Sbjct: 245 SMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSG 304

Query: 372 KLEDAIKVLN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            L +A +V    M   G + N +T+N +       G  + A  +  +M+   C+P+  +Y
Sbjct: 305 HLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSY 364

Query: 431 NILMQMFATSKS-TDMVLKLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             L+++F + +   D V  L  E+  ++ +  +++TY +LI   C +G    AY+   EM
Sbjct: 365 RPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEM 424

Query: 489 IEEKCLKPGSSVYEMVLQQLRRA 511
           +  + + P S    M+L + +R 
Sbjct: 425 VSSE-IAPRSKTCVMLLDEAQRT 446



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 97/251 (38%), Gaps = 39/251 (15%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  F  S   Y  ++    K R F   +  +D M S+     V T+++++    +     
Sbjct: 213 RRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFE 272

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNL 258
           EA+   +RM+  GC PD + ++ +I++L +     EA   F  +   +    ++  Y  +
Sbjct: 273 EALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTM 332

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVY------------------------------ 288
           +  +C  G   +A  V +EM+    +P++                               
Sbjct: 333 ISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKH 392

Query: 289 -------TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
                  TY+++I  LCR G    A+ +F EM+     P S T   L+    + +    V
Sbjct: 393 NLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLDEAQRTNMETYV 452

Query: 342 LQVYNQMKRLG 352
            ++ N M   G
Sbjct: 453 ERIGNYMSSFG 463


>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
 gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
          Length = 543

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 187/360 (51%), Gaps = 5/360 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSI 188
            L+FFNW    P + H    Y EM+++ G++++        D +  + R V +T   F++
Sbjct: 135 ALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAV 194

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+ RY  A    EA+  F   ++YG   D + F I++  LCR +   EA++ F   KD+F
Sbjct: 195 LLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEF 254

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
                 +  ++ GWC  G++ +A+R++ ++  + ++ +++TY   I+AL + G+I+ A  
Sbjct: 255 PHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVK 314

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F +M E G  P+    N ++      +R  + L+++ +M    C+AD  TYN LI   C
Sbjct: 315 LFKKMWETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLC 374

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  ++E   ++L+ M  KGC+PN  T++ + +   K  DV     +  +M+   CE ++ 
Sbjct: 375 KKKRMEKVYELLDDMEAKGCSPNNRTYSYVLKTTEKPKDVIA---LMQRMEQTGCELDSD 431

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TYN+++ ++   K    V ++  EME N   P+  ++ I++      G  + A +Y   M
Sbjct: 432 TYNLILNLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTM 491



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 16/261 (6%)

Query: 141 RPEFVHSPDLYHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           + EF H    ++ ++N   + G +R     W+  D++ S+ VE  + T+   +    + G
Sbjct: 251 KDEFPHVTKSWNIILNGWCVKGSLRDAQRIWN--DIIASK-VERDLFTYGTFINALAKNG 307

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYT 256
             + AV  F +M E G  PD    + +I  LC K R  EA   F  + D+  + DV  Y 
Sbjct: 308 RISAAVKLFKKMWETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYN 367

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA---EM 313
            L++  C+   + +   +  +M+  G  PN  TYS V+          +  DV A    M
Sbjct: 368 TLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYSYVLKT------TEKPKDVIALMQRM 421

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            + GCE +S T+N ++ ++      + V QV+++M+R G   D  ++  ++      GKL
Sbjct: 422 EQTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGKL 481

Query: 374 EDAIKVLNSMVRKGCNPNAST 394
           ++A++   +M  +G  P   T
Sbjct: 482 DEALQYYTTMKSRGMIPEPRT 502



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 108/244 (44%), Gaps = 8/244 (3%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLE---VGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            Y+ ++D L R  ++     +F E+ E   V    N + F  L+  +  A + ++ ++V+
Sbjct: 154 AYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKM-FAVLLNRYAGAHKVQEAIEVF 212

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS-TFNMIFRCISK 404
              K  G E D + +  L+   C+   +E+A  +     +K   P+ + ++N+I      
Sbjct: 213 YLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFRE--KKDEFPHVTKSWNIILNGWCV 270

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G +  A R++  +   K E +  TY   +   A +      +KL K+M E  + P+V  
Sbjct: 271 KGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWETGINPDVAI 330

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              +I   C       A +   EM +  C +   + Y  +++ L +  +++K  EL++ M
Sbjct: 331 CNCIIDQLCFKNRIPEALEIFGEMNDRLC-QADVATYNTLIKYLCKKKRMEKVYELLDDM 389

Query: 525 VDRG 528
             +G
Sbjct: 390 EAKG 393


>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22670, mitochondrial; Flags: Precursor
 gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 562

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 242/515 (46%), Gaps = 51/515 (9%)

Query: 40  VTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSL----- 94
           VTN N++ ++P ++ E    S +  S IKD     P+ SS+S    + DF IPSL     
Sbjct: 26  VTN-NTAEESPIVAAE----SPELPSWIKDFLSNKPSSSSSSVSKDDEDFVIPSLANWVE 80

Query: 95  SLGFS--QISTAHSI-------------------SPSTVRHVIEKSCGVRHGIPLLQVL- 132
           S  FS  Q+S  + +                   S   V   + K   V     +LQVL 
Sbjct: 81  SQKFSRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLR 140

Query: 133 ----------SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-- 180
                      FF W  ++  +VHS   Y+ M+++ GK R FDL W  ++ M ++N E  
Sbjct: 141 RFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-NKNEESK 199

Query: 181 -ITVDTFSILVRRYVRAGLAAEAVHAFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQ 238
            +T+DT S ++RR  ++G   +AV AF  ME+ YG   D IA + ++  L ++     A 
Sbjct: 200 LVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAH 259

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
             F  L D  +PD   +  L+ G+C+A    +A  +   MK+    P+V TY+  ++A C
Sbjct: 260 EVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           + G   R +++  EM E GC PN +T+  +M    K+ +  + L VY +MK  GC  D  
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
            Y+ LI    K G+ +DA ++   M  +G   +   +N +            A R+  +M
Sbjct: 380 FYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439

Query: 419 KDLK---CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
           +D +   C PN  TY  L++M    K   ++  L   M +N+V  +V+TY +LI   C  
Sbjct: 440 EDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMS 499

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           G    A  +  E +  K + P  S  +M++ +L +
Sbjct: 500 GKVEEACLFFEEAV-RKGMVPRDSTCKMLVDELEK 533


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 182/363 (50%), Gaps = 19/363 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y ++I       + + A+   + MK   +  +V T++IL+  + +AGL  +A 
Sbjct: 456 FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQAR 515

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
             F+ M   GC P+ + ++ +I    + ++   A   F+  L +  +P+V+ YT L+ G 
Sbjct: 516 KWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGH 575

Query: 263 CRAGNISEAERVFREMKMAGIQ-----------------PNVYTYSIVIDALCRCGQITR 305
           C+AG I +A +++  M+   I+                 PNV TY  ++D LC+  ++  
Sbjct: 576 CKAGQIEKACQIYARMR-GDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKE 634

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           AH++   ML  GCEPN I ++ ++    K  + +   +V+ +M   G   +  TY+  ID
Sbjct: 635 AHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFID 694

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           C  KD +L+  +KVL+ M+   C PN   +  +   + K+G  + A+++  KM++  C P
Sbjct: 695 CLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNP 754

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N VTY  ++  F  S   +  L+L ++M      PN  TYR+LI   C  G  + AYK +
Sbjct: 755 NVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLL 814

Query: 486 REM 488
            EM
Sbjct: 815 DEM 817



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 187/440 (42%), Gaps = 45/440 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD--LAWHFIDLMKSRNVEITVDTFSIL 189
           + FF W   +  + H+P ++ ++++L G     D  +   F+  +K  + E+     + L
Sbjct: 123 VKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFL 182

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI---------------------- 227
           VR+  R G    A+    R++++G  P +  ++ +I +                      
Sbjct: 183 VRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAF 242

Query: 228 -------------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
                        LC+  +  EA    D  +D F PD + Y  +V G C A    EA  +
Sbjct: 243 VMDRYTLSCFAYSLCKGGKCREAFDLIDEAED-FVPDTVFYNRMVSGLCEASLFEEAMDI 301

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
              M+ +   PNV TY I++    R GQ+ R   + + M+  GC PN   FN+L+  + K
Sbjct: 302 LHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCK 361

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRKGC 388
           +       +++ +M + GC+   + YN  I   C + +      L+   K  + M+  G 
Sbjct: 362 SRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGV 421

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             N    +   RC+   G  + A ++  +M      P+  TY+ ++     +   +    
Sbjct: 422 VLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFS 481

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L +EM+ N + P+V TY ILI  +C  G    A K+  EM+ + C  P    Y  ++   
Sbjct: 482 LFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGC-TPNVVTYTALIHAY 540

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            +A Q+   +EL E M+  G
Sbjct: 541 LKAKQMPVADELFEMMLLEG 560



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 185/419 (44%), Gaps = 24/419 (5%)

Query: 135 FNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYV 194
           F+ +    +FV     Y+ M++   +   F+ A   +  M+S +    V T+ IL+   +
Sbjct: 266 FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCL 325

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVI 253
           R G         + M   GC P++  F+ +I   C+ R  S A   F  + K   +P  +
Sbjct: 326 RKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385

Query: 254 VYTNLVRGWCR------AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           VY   +   C       +  +   E+ + EM   G+  N    S     LC  G+  +A 
Sbjct: 386 VYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAF 445

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +  EM+  G  P+  T++ ++     AS+ EK   ++ +MKR G      TY  LID  
Sbjct: 446 KIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSF 505

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK G ++ A K  + M+ KGC PN  T+  +     K   +  A  ++  M    C+PN 
Sbjct: 506 CKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNV 565

Query: 428 VTYNILMQMFATS----KSTDMVLKLKKEMEENEVE------------PNVNTYRILITM 471
           VTY  L+     +    K+  +  +++ ++E ++++            PNV TY  L+  
Sbjct: 566 VTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDG 625

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            C       A++ +  M+   C +P   VY+ V+    + G+LQ  +E+  KM +RG++
Sbjct: 626 LCKANRVKEAHELLDTMLAHGC-EPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYS 683



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 15/227 (6%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           +L+VLS     +  P  V    +Y EM++   K+ + D A+  +  M+ +     V T++
Sbjct: 705 VLKVLSKMLENSCTPNVV----IYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYT 760

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            ++  + ++G   + +  F  M   GCAP+ I + ++I+  C      EA    D +K  
Sbjct: 761 AMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQT 820

Query: 248 FEPD-VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           + P  ++ +  ++ G+ +    S    +  E+      P    Y I+ID   + G++  A
Sbjct: 821 YWPKHILSHRKIIEGFSQEFITSIG--LLDELSENESVPVDSLYRILIDNYIKAGRLEVA 878

Query: 307 HDVFAEMLEVGCEP-----NSITFNNLMRVHVKASRTEKVLQVYNQM 348
            D+     E+   P     N   + +L+     AS+ +K L++Y  M
Sbjct: 879 LDLLE---EISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASM 922


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 201/420 (47%), Gaps = 40/420 (9%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y  +IN   K R F  A+  +D M+ R +      ++ +++     G    A+ 
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWC 263
            +  M+ + CAP  I ++I++  LC+  R S+A     D ++    P+V+ Y  L+ G+C
Sbjct: 90  HYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + GN+ EA  +F +M      P+V+TY+I+ID  C+  +      +  EM++ GCEPN I
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N LM   VK+ +      +   M R  C+    T+N +ID  CK G+L+ A ++   M
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN------------ 431
             +GC P+  T+N++     +   ++ A ++  +M +  C P+ VTYN            
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328

Query: 432 -----------------------ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
                                   L+     S+  D   KL +EME N   P+V  Y IL
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 388

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +C     + +  +  EM+++ C+ P    Y +V+ +L ++ +++    L++ M++RG
Sbjct: 389 IHGFCKADQLDKSLAFFSEMLDKGCV-PTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 3/342 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           L+  +VR   A EA   F       C+PD I +S +I+  C+ R   +A    D ++ + 
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             P   VY  +++G C  G +  A   +R+M+     P+V TY+I++DALC+  +I+ A 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDAS 122

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +  +M+E GC PN +T+N L+    K    ++ + ++NQM    C  D  TYN LID +
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK  + +D  K+L  MV+ GC PN  T+N +   + K G    A  +   M    C+P+ 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            T+N+++ MF      D+  +L + M +    P++ TY I+I+  C     ++A + +  
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           M E  C  P    Y  ++  L +A Q+ +  E+ E + + G+
Sbjct: 303 MTEAGC-PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 343



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+   V+  + ++   ++       C  D+ITY+ LI+  CK    + A ++L+ M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G  P+ + +N I + +   G V+ A   Y  M+   C P+ +TY IL+     S     
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISD 120

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              + ++M E    PNV TY  LI  +C +G+ + A     +M+E  C  P    Y +++
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSC-SPDVFTYNILI 179

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
               +  + Q   +L+++MV  G
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYG 202


>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 204/403 (50%), Gaps = 20/403 (4%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLL-QVLS-----------FFNWVTARPEFVHSPDLYHEMI 155
           S S V+H +E SCGV     L+ +VLS           FF W   +P + HS   YH MI
Sbjct: 96  SMSLVKHKLE-SCGVAASSELVVEVLSRVRNHWEAAFTFFLWAAKQPGYAHSLRAYHSMI 154

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVE---ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           ++ GK+R+FD AW  ID M+        +T  T SI++RRY       +A++ F   +++
Sbjct: 155 SILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVGKAINTFYAHKQF 214

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA-GNISEA 271
                   F  ++S LCR +   +A+      ++ F  D   +  ++ GWC   G++ EA
Sbjct: 215 KFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILNGWCNVIGSMREA 274

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           ER +REM   GIQ +V +YS +I    +   + +   +F +M E+   P+   +N ++  
Sbjct: 275 ERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAPDRKVYNAVVHA 334

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             KAS  ++ L +   M+  G   D++TYN LI    +  K+ +A +V + M+++G +P 
Sbjct: 335 LAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPT 394

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T++  FR +    +V     +  KMK+  C P+  TY +L++ F   +  D V KL  
Sbjct: 395 IRTYHAFFRILKSGEEV---FMLLEKMKETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWS 451

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           EM EN V P+ ++Y +LI      G    AYKY  EM E++ L
Sbjct: 452 EMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIEMKEKQFL 494



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 149/301 (49%), Gaps = 9/301 (2%)

Query: 173 LMKSRNV-EITVDTFSILVRRYVRA-GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           L  +RNV      +F+I++  +    G   EA   +  M   G   D +++S +IS   +
Sbjct: 243 LFCNRNVFPFDTKSFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSK 302

Query: 231 KRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
               ++    F+ +K+ +  PD  VY  +V    +A  + EA  + + M+  GI P+  T
Sbjct: 303 VTNLNKVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVT 362

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +I  L R  +I  A +VF EML+ G  P   T++   R+ +K+   E+V  +  +MK
Sbjct: 363 YNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFRI-LKSG--EEVFMLLEKMK 419

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             GC  D  TY  LI   C+  +L++  K+ + M   G  P+ S++ ++   +   G + 
Sbjct: 420 ETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLE 479

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A++ Y +MK+ +  P   T ++L    +  ++ D+ +    ++++N+ +   ++ + L+
Sbjct: 480 EAYKYYIEMKEKQFLPEPKTEDMLQAWISGKETADVRM---IDLKDNQSDHGQSSKKTLV 536

Query: 470 T 470
           T
Sbjct: 537 T 537


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 181/363 (49%), Gaps = 18/363 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y ++I       + + A+     MK   +   V T++ L+ R+ + GL  +A 
Sbjct: 118 FIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQAR 177

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGW 262
           + F+ M++ GCAP+ + ++ +I    + R+ S A   F+  L +   P+++ YT L+ G 
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237

Query: 263 CRAGNISEAERVFREMKMAGI-----------------QPNVYTYSIVIDALCRCGQITR 305
           C+AG   +A +++  MK   +                 +PNV TY  ++D LC+  ++  
Sbjct: 238 CKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKE 297

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A D+   M   GCEPN I ++ L+    K  + ++  +V+ +M   GC  +  TY+ LID
Sbjct: 298 ARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              KD +L+ A+KVL  M+   C PN   +  +   + K+G  + A+R+   M++  C P
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N VTY  ++  F  +   D  L+L + M      PN  TYR+LI   C  G  ++A+K +
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL 477

Query: 486 REM 488
            EM
Sbjct: 478 EEM 480



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 173/350 (49%), Gaps = 19/350 (5%)

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVY 255
           G   +A +    M   G  PD   +S VI  LC   +  +A   F  +K +   PDV  Y
Sbjct: 101 GKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTY 160

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
           T L+  +C+ G I +A   F EM+  G  PNV TY+ +I A  +  +++RA+++F  ML 
Sbjct: 161 TTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLS 220

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC-----------------EADTI 358
            GC PN +T+  L+  H KA  TEK  Q+Y +MK                     E + +
Sbjct: 221 NGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVV 280

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  L+D  CK  K+++A  +L +M  +GC PN   ++ +     K+G ++ A  ++ KM
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
               C PN  TY+ L+      K  D+ LK+  +M EN   PNV  Y  ++   C +G  
Sbjct: 341 LGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKT 400

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + AY+ +  M+EEK   P    Y  ++    +AG++ +  EL++ M  +G
Sbjct: 401 DEAYRLML-MMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKG 449



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 184/398 (46%), Gaps = 23/398 (5%)

Query: 147 SPDLYH--EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+Y    +++   KV   + A ++ D M+       V T++ L+  Y++    + A  
Sbjct: 154 TPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANE 213

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKF--------------- 248
            F  M   GC P+ + ++ +I   C+     +A   +  +K DK                
Sbjct: 214 IFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSE 273

Query: 249 --EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             EP+V+ Y  LV G C+A  + EA  +   M + G +PN   Y  +ID  C+ G++  A
Sbjct: 274 LKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEA 333

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            +VF +ML  GC PN  T+++L+    K  R +  L+V  +M    C  + + Y  ++D 
Sbjct: 334 QEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDG 393

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK GK ++A +++  M  KGC PN  T+  +     K G V+    +   M    C PN
Sbjct: 394 LCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPN 453

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            +TY +L+     +   D   KL +EM++     ++  YR +I    G  H   A   + 
Sbjct: 454 FITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIE---GFSHEFVASLGLL 510

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             + E    P   VY++++    +AG+L+   EL E++
Sbjct: 511 AELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL 548



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 148/340 (43%), Gaps = 25/340 (7%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGN---- 267
           GC P  + F+ ++   CR      A      +    ++P  +VY  L+ G C   +    
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 268 --ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             I  AER + EM   G+  N          LC  G+  +A++V  EM+  G  P+S T+
Sbjct: 66  EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           + ++     AS+ EK  Q++ +MKR G   D  TY  L+D  CK G +E A    + M +
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQ 185

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            GC PN  T+  +     K   ++ A+ ++  M    C PN VTY  L+     +  T+ 
Sbjct: 186 DGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEK 245

Query: 446 VLKLKKEMEENEV-----------------EPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             ++   M+ ++V                 EPNV TY  L+   C       A   +  M
Sbjct: 246 ACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETM 305

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             E C +P   +Y+ ++    + G+L + +E+  KM+  G
Sbjct: 306 SLEGC-EPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 7/222 (3%)

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M+  GC P+ + FN+L+  + ++       ++  +M   G +   + YN LI   C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 373 LED------AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           L        A +  N M+  G   N        RC+  +G    A+ +  +M      P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           + TY+ ++     +   +   +L +EM+ N + P+V TY  L+  +C +G    A  +  
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           EM ++ C  P    Y  ++    +  +L +  E+ E M+  G
Sbjct: 182 EMQQDGC-APNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M+ +GC P+   FN +     + GD   A+++  KM     +P  V YNIL+    +++ 
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 443 --TDMVLKLKKEMEENEVEPNVNTYRILITMY----CGMGHWNNAYKYIREMIEEKCLKP 496
             +  V+ L +      +E  V   ++ +  +    C +G +  AY  IREM+  K   P
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMM-SKGFIP 120

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            SS Y  V+  L  A +++K  +L ++M   G T
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIT 154


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 202/402 (50%), Gaps = 3/402 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L F   ++ R  F      ++ ++N   K      A   +D+M     +  + T++ L
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           +    + G   EAV   N+M E  C+P+ + ++ +IS LC++ +  EA      L  K  
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDV  Y +L++G C + N + A  +++EMK  G  P+ +TY+++ID+LC  G++  A +
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM   GC  N IT+N L+    K  R  +  ++++QM+  G   +++TYN LID  C
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  ++E+A ++++ M+ +G  P+  T+N +     K GD+  A  +   M    CEP+ V
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY  L+     +   +   KL + ++   +    + Y  +I           A +  REM
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM 642

Query: 489 IEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRGF 529
           I EK   P +  Y++V + L +  G + +  + V +M++RG+
Sbjct: 643 I-EKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGY 683



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 221/511 (43%), Gaps = 52/511 (10%)

Query: 62  KFHSLIK-DHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVI---E 117
           K+H+     HH  +  P+SNS  S       P  +   S    + + +P+ + H +   E
Sbjct: 8   KYHTWFPFHHHLASHKPTSNSTLSFATTNHEPLTTTTNSATRLSPNFTPTQLLHSLRREE 67

Query: 118 KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
            S  V H          F W + +P F  S  ++ E+++  GK  +FD     +  MK  
Sbjct: 68  DSSAVIH---------LFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKIS 118

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRME-EYGCA--------------------- 215
              I  D+  + +  Y   GL  E +   + ME E+G                       
Sbjct: 119 LSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKL 178

Query: 216 --------------PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVR 260
                         PD   F+I+I  LCR  +   A    + ++D    PD   +T +++
Sbjct: 179 VEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQ 238

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM-LEVGCE 319
           G+   GN+  A RV  +M  AG      T +++++  C+ G+I  A     EM L  G  
Sbjct: 239 GFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF 298

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+  TFN L+    K    +  L+V + M R G + D  TYN LI   CK G++++A+KV
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           LN M+ + C+PN  T+N I   + K   V  A ++   +      P+  TYN L+Q    
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL 418

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           S++  + ++L KEM+     P+  TY +LI   C  G    A   ++EM    C +    
Sbjct: 419 SRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCAR-NVI 477

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            Y  ++    +  ++ + EE+ ++M  +G +
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVS 508



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 200/476 (42%), Gaps = 73/476 (15%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           ++L F + +      V +   Y+ ++N+     +  L       M SR +   V TF+IL
Sbjct: 142 EILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNIL 201

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL--------------------- 228
           ++   RA     A+     ME++G  PD+  F+ ++                        
Sbjct: 202 IKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGC 261

Query: 229 --------------CRKRRASEAQSFFD--SLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
                         C++ R  EA  F +  SL++ F PD   +  LV G  + G++  A 
Sbjct: 262 VVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHAL 321

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            V   M   G  P++YTY+ +I  LC+ G++  A  V  +M+E  C PN++T+N ++   
Sbjct: 322 EVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTL 381

Query: 333 VKASRTEKV-----------------------------------LQVYNQMKRLGCEADT 357
            K ++ E+                                    +++Y +MK  GC  D 
Sbjct: 382 CKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDE 441

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TYN LID  C  GKL++A+ +L  M   GC  N  T+N +     K   +  A  ++ +
Sbjct: 442 FTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQ 501

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M+      N+VTYN L+     S+  +   +L  +M    + P+  TY  L+T +C  G 
Sbjct: 502 MELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGD 561

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
              A   ++ M  + C +P    Y  ++  L +AG+++   +L+  +  +G    P
Sbjct: 562 IKKAADIVQTMASDGC-EPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTP 616


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 184/362 (50%), Gaps = 17/362 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y ++I L     + D A+   + MKS +V   V T++IL+  + + GL  +A 
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
             F+ M   GCAP+ + ++ +I    + R+ S A   F+  L +   P+V+ YT L+ G 
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 263 CRAGNISEAERVFREMKM-AGI---------------QPNVYTYSIVIDALCRCGQITRA 306
           C++G I +A +++  M+  A I                PN++TY  ++D LC+  ++  A
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            D+   M   GCEPN I ++ L+    K  + ++   V+ +M   G   +  TY+ LID 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             KD +L+ A+KVL+ M+   C PN   +  +   + K+G  + A+R+   M++  C PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VTY  ++  F  +   D  L+L ++M      PN  TYR+LI   C  G  ++A++ + 
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 487 EM 488
           EM
Sbjct: 836 EM 837



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 172/357 (48%), Gaps = 18/357 (5%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DK 247
           L R    AG   +A      M   G  PD   +S VI +LC   +   A   F+ +K + 
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             PDV  YT L+  +C+ G + +A + F EM   G  PNV TY+ +I A  +  +++ A+
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT---------- 357
           ++F  ML  GC PN +T+  L+  H K+ + EK  Q+Y +M+      D           
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 358 ------ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
                  TY  L+D  CK  K+++A  +L+ M  +GC PN   ++ +     K+G ++ A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ KM +    PN  TY+ L+      K  D+ LK+   M EN   PNV  Y  +I  
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C +G  + AY+ +  M+EEK   P    Y  ++    +AG++ K  EL+ +M  +G
Sbjct: 751 LCKVGKTDEAYR-LMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 188/438 (42%), Gaps = 44/438 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           + FF W   +  + H+  +YH ++ + G      +   F+  ++  + EI     ++L+R
Sbjct: 146 VKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIR 205

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI------------------------ 227
           +  R GL   A+    R+++ G  P ++ ++ ++ +                        
Sbjct: 206 KCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNM 265

Query: 228 -----------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
                      LC+  R  EA +  +  K++F+ D ++YT ++ G C A    EA     
Sbjct: 266 DGYTLGCFVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGLCEASLFEEAMDFLS 323

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            M+ +   PNV TY I++    R  Q+ R   + + M+  GC P+   FN+L+  + ++ 
Sbjct: 324 RMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSG 383

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRKGCNP 390
                 ++  +M   GC+   + YN LI   C + K      LE A K    M+      
Sbjct: 384 DYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVL 443

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N    + + RC+   G    A+ +  +M      P+T TY+ ++ +   +   D    L 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           +EM+ N V P+V TY ILI  +C +G    A K+  EM+ + C  P    Y  ++    +
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC-APNVVTYTALIHAYLK 562

Query: 511 AGQLQKHEELVEKMVDRG 528
           A ++    EL E M+  G
Sbjct: 563 ARKMSSANELFEMMLSEG 580



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 34/417 (8%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           + EF     +Y +MI+   +   F+ A  F+  M+S +    V T+ IL+   +R     
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
                 + M   GC P +  F+ +I   CR    S A      + D   +P  +VY  L+
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 260 RGWCRAGN--------ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
            G C  GN        +  AE+ + EM  A +  N    S +   LC  G+  +A+ +  
Sbjct: 412 GGIC--GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM+  G  P++ T++ ++ +   AS+ +    ++ +MK      D  TY  LID  CK G
Sbjct: 470 EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            L+ A K  + MVR GC PN  T+  +     K   ++ A+ ++  M    C PN VTY 
Sbjct: 530 LLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYT 589

Query: 432 ILM-------------QMFATSKS------TDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            L+             Q++A  +        DM  K+    + N  +PN+ TY  L+   
Sbjct: 590 ALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID---DGNIRDPNIFTYGALVDGL 646

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C       A   +  M  E C +P   VY+ ++    + G+L + + +  KM +RG+
Sbjct: 647 CKAHKVKEARDLLDVMSVEGC-EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGY 702



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 96/227 (42%), Gaps = 40/227 (17%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y EMI+   KV + D A+  + +M+ +     V T++ ++  + +AG   + +    +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV-YTNLVRGWCRAGNI 268
              GCAP+ + + ++I+  C      +A    D +K  + P  +  Y  ++ G+ R   I
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII 862

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCG--------------------------- 301
           S    +  E+      P +  Y I+ID+ C+ G                           
Sbjct: 863 SLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYS 920

Query: 302 ----------QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
                     ++ +A +++A+M++ G  P    F  L++  ++ +RT
Sbjct: 921 SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRT 967


>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
 gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 195/391 (49%), Gaps = 2/391 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +P FVH    YH M+ +  K RQF+     ++ M  + + +T+DTFSI +R +
Sbjct: 126 FFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRL-LTLDTFSIAMRAF 184

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             A    +AV  F  M+ +         + ++  L R +   EAQ+ F  L+ +F P++ 
Sbjct: 185 AAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLR 244

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+ GWCR  N+ EA R++ EM   G +P++ T++I+++ L R  + + A   F  M
Sbjct: 245 TYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVM 304

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  P+  ++  L+R   K ++ ++ +  + +M   GC  D   Y  L+  +    ++
Sbjct: 305 KAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRM 364

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +   ++L  M  KGC P+  T+N + + ++     + A R+Y KM     EP+  +YN++
Sbjct: 365 DMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMI 424

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M+ +   ++ +M   +  EM +    P+ N+Y + I      G    A KY+ EMI EK 
Sbjct: 425 MKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMI-EKG 483

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +K     Y        RAG+    EEL +KM
Sbjct: 484 MKAPQLDYNKFAADFSRAGKPDILEELAQKM 514



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 38/243 (15%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    I L G +R  +   A  F ++MK++     V +++IL+R   +     EAV  
Sbjct: 276 PDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGY 335

Query: 206 F-----------------------------------NRMEEYGCAPDKIAFSIVISILCR 230
           F                                     M+E GC PD   ++ +I ++  
Sbjct: 336 FYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTS 395

Query: 231 KRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           +R   +A   +  + ++  EP +  Y  +++ + R  N      V+ EM   G  P+  +
Sbjct: 396 QRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNS 455

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y++ I  L   G+   A     EM+E G +   + +N       +A + + + ++  +MK
Sbjct: 456 YTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELAQKMK 515

Query: 350 RLG 352
             G
Sbjct: 516 FSG 518


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 184/362 (50%), Gaps = 17/362 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y ++I L     + D A+   + MKS +V   V T++IL+  + + GL  +A 
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
             F+ M   GCAP+ + ++ +I    + R+ S A   F+  L +   P+V+ YT L+ G 
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 263 CRAGNISEAERVFREMKM-AGI---------------QPNVYTYSIVIDALCRCGQITRA 306
           C++G I +A +++  M+  A I                PN++TY  ++D LC+  ++  A
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            D+   M   GCEPN I ++ L+    K  + ++   V+ +M   G   +  TY+ LID 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             KD +L+ A+KVL+ M+   C PN   +  +   + K+G  + A+R+   M++  C PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VTY  ++  F  +   D  L+L ++M      PN  TYR+LI   C  G  ++A++ + 
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 487 EM 488
           EM
Sbjct: 836 EM 837



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 173/359 (48%), Gaps = 18/359 (5%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK- 245
           S L R    AG   +A      M   G  PD   +S VI +LC   +   A   F+ +K 
Sbjct: 449 SNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS 508

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           +   PDV  YT L+  +C+ G + +A + F EM   G  PNV TY+ +I A  +  +++ 
Sbjct: 509 NHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSS 568

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT-------- 357
           A+++F  ML  GC PN +T+  L+  H K+ + EK  Q+Y +M+      D         
Sbjct: 569 ANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDD 628

Query: 358 --------ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
                    TY  L+D  CK  K+++A  +L+ M  +GC PN   ++ +     K+G ++
Sbjct: 629 GNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++ KM +    PN  TY+ L+      K  D+ LK+   M EN   PNV  Y  +I
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              C +G  + AY+ +  M+EEK   P    Y  ++    +AG++ K  EL+ +M  +G
Sbjct: 749 DGLCKVGKTDEAYR-LMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 188/438 (42%), Gaps = 44/438 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           + FF W   +  + H+  +YH ++ + G      +   F+  ++  + EI     ++L+R
Sbjct: 146 VKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIR 205

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI------------------------ 227
           +  R GL   A+    R+++ G  P ++ ++ ++ +                        
Sbjct: 206 KCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNM 265

Query: 228 -----------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
                      LC+  R  EA +  +  K++F+ D ++YT ++ G C A    EA     
Sbjct: 266 DGYTLGCFVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGLCEASLFEEAMDFLS 323

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            M+ +   PNV TY I++    R  Q+ R   + + M+  GC P+   FN+L+  + ++ 
Sbjct: 324 RMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSG 383

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRKGCNP 390
                 ++  +M   GC+   + YN LI   C + K      LE A K    M+      
Sbjct: 384 DYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVL 443

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N    + + RC+   G    A+ +  +M      P+T TY+ ++ +   +   D    L 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           +EM+ N V P+V TY ILI  +C +G    A K+  EM+ + C  P    Y  ++    +
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC-APNVVTYTALIHAYLK 562

Query: 511 AGQLQKHEELVEKMVDRG 528
           A ++    EL E M+  G
Sbjct: 563 ARKMSSANELFEMMLSEG 580



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 34/417 (8%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           + EF     +Y +MI+   +   F+ A  F+  M+S +    V T+ IL+   +R     
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
                 + M   GC P +  F+ +I   CR    S A      + D   +P  +VY  L+
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 260 RGWCRAGN--------ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
            G C  GN        +  AE+ + EM  A +  N    S +   LC  G+  +A+ +  
Sbjct: 412 GGIC--GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM+  G  P++ T++ ++ +   AS+ +    ++ +MK      D  TY  LID  CK G
Sbjct: 470 EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            L+ A K  + MVR GC PN  T+  +     K   ++ A+ ++  M    C PN VTY 
Sbjct: 530 LLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYT 589

Query: 432 ILM-------------QMFATSKS------TDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            L+             Q++A  +        DM  K+    + N  +PN+ TY  L+   
Sbjct: 590 ALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID---DGNIRDPNIFTYGALVDGL 646

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C       A   +  M  E C +P   VY+ ++    + G+L + + +  KM +RG+
Sbjct: 647 CKAHKVKEARDLLDVMSVEGC-EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGY 702


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 184/362 (50%), Gaps = 17/362 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y ++I L     + D A+   + MKS +V   V T++IL+  + + GL  +A 
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
             F+ M   GCAP+ + ++ +I    + R+ S A   F+  L +   P+V+ YT L+ G 
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 263 CRAGNISEAERVFREMKM-AGI---------------QPNVYTYSIVIDALCRCGQITRA 306
           C++G I +A +++  M+  A I                PN++TY  ++D LC+  ++  A
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            D+   M   GCEPN I ++ L+    K  + ++   V+ +M   G   +  TY+ LID 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             KD +L+ A+KVL+ M+   C PN   +  +   + K+G  + A+R+   M++  C PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VTY  ++  F  +   D  L+L ++M      PN  TYR+LI   C  G  ++A++ + 
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 487 EM 488
           EM
Sbjct: 836 EM 837



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 172/357 (48%), Gaps = 18/357 (5%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DK 247
           L R    AG   +A      M   G  PD   +S VI +LC   +   A   F+ +K + 
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             PDV  YT L+  +C+ G + +A + F EM   G  PNV TY+ +I A  +  +++ A+
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT---------- 357
           ++F  ML  GC PN +T+  L+  H K+ + EK  Q+Y +M+      D           
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 358 ------ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
                  TY  L+D  CK  K+++A  +L+ M  +GC PN   ++ +     K+G ++ A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ KM +    PN  TY+ L+      K  D+ LK+   M EN   PNV  Y  +I  
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C +G  + AY+ +  M+EEK   P    Y  ++    +AG++ K  EL+ +M  +G
Sbjct: 751 LCKVGKTDEAYR-LMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 188/438 (42%), Gaps = 44/438 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           + FF W   +  + H+  +YH ++ + G      +   F+  ++  + EI     ++L+R
Sbjct: 146 VKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIR 205

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI------------------------ 227
           +  R GL   A+    R+++ G  P ++ ++ ++ +                        
Sbjct: 206 KCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNM 265

Query: 228 -----------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
                      LC+  R  EA +  +  K++F+ D ++YT ++ G C A    EA     
Sbjct: 266 DGYTLGCFVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGLCEASLFEEAMDFLS 323

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            M+ +   PNV TY I++    R  Q+ R   + + M+  GC P+   FN+L+  + ++ 
Sbjct: 324 RMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSG 383

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRKGCNP 390
                 ++  +M   GC+   + YN LI   C + K      LE A K    M+      
Sbjct: 384 DYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVL 443

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N    + + RC+   G    A+ +  +M      P+T TY+ ++ +   +   D    L 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           +EM+ N V P+V TY ILI  +C +G    A K+  EM+ + C  P    Y  ++    +
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC-APNVVTYTALIHAYLK 562

Query: 511 AGQLQKHEELVEKMVDRG 528
           A ++    EL E M+  G
Sbjct: 563 ARKMSSANELFEMMLSEG 580



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 34/417 (8%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           + EF     +Y +MI+   +   F+ A  F+  M+S +    V T+ IL+   +R     
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
                 + M   GC P +  F+ +I   CR    S A      + D   +P  +VY  L+
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 260 RGWCRAGN--------ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
            G C  GN        +  AE+ + EM  A +  N    S +   LC  G+  +A+ +  
Sbjct: 412 GGIC--GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM+  G  P++ T++ ++ +   AS+ +    ++ +MK      D  TY  LID  CK G
Sbjct: 470 EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            L+ A K  + MVR GC PN  T+  +     K   ++ A+ ++  M    C PN VTY 
Sbjct: 530 LLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYT 589

Query: 432 ILM-------------QMFATSKS------TDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            L+             Q++A  +        DM  K+    + N  +PN+ TY  L+   
Sbjct: 590 ALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID---DGNIRDPNIFTYGALVDGL 646

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C       A   +  M  E C +P   VY+ ++    + G+L + + +  KM +RG+
Sbjct: 647 CKAHKVKEARDLLDVMSVEGC-EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGY 702



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 111/235 (47%), Gaps = 9/235 (3%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y EMI+   KV + D A+  + +M+ +     V T++ ++  + +AG   + +    +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV-YTNLVRGWCRAGNI 268
              GCAP+ + + ++I+  C      +A    D +K  + P  +  Y  ++ G+ R   I
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII 862

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT---- 324
           S    +  E+      P +  Y I+ID+ C+ G++  A ++  EM    C   S      
Sbjct: 863 SLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDL 918

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           +++L+     AS+ +K  ++Y  M + G   +   + +L+    +  + E+A+++
Sbjct: 919 YSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
          Length = 637

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 194/392 (49%), Gaps = 3/392 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W TA   F H+   Y +M+ + GK RQF+     +  M  +   +++D F + ++ +
Sbjct: 212 FFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEM-GKAGTLSMDAFKVAIKSF 270

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             AG    AV  F  M + G      +F+ ++  L  +    EA+  FD +  ++ PD+ 
Sbjct: 271 AAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYSPDLR 330

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+  WC A N+ EA RV+ EM   G++P+V  ++ +I+ L R  +   A  +F  M
Sbjct: 331 SYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELM 390

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  T+  L+  H K  + +  ++ + +M+   C+ D  TY  L+  +    ++
Sbjct: 391 KAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRM 450

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +    VL  M +KGC P+A T+N + + ++     + A R+Y KM     +P   TYN++
Sbjct: 451 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMM 510

Query: 434 MQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           M+  F   ++  M   + +EM    + P+VN+Y + I+ +   G    AYKYI EMI + 
Sbjct: 511 MKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKG 570

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              P     +     L +AG+L    EL +K+
Sbjct: 571 MKAPQIDCNKFA-ADLSKAGKLDMLYELAQKV 601



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 2/195 (1%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  + D+A    + M+    +  V T++ L+  Y  A            M + GC PD  
Sbjct: 411 KRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDAR 470

Query: 220 AFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG-NISEAERVFRE 277
            ++ +I +L  ++   +A   +  + K   +P +  Y  +++ +     N +    V+ E
Sbjct: 471 TYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEE 530

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   GI P+V +Y++ I    R G+   A+    EM+  G +   I  N       KA +
Sbjct: 531 MHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADLSKAGK 590

Query: 338 TEKVLQVYNQMKRLG 352
            + + ++  ++K  G
Sbjct: 591 LDMLYELAQKVKFAG 605


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 212/516 (41%), Gaps = 79/516 (15%)

Query: 80  NSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVT 139
           N+NP LNP    P     + +I T    S   +R        +R    ++   ++F  + 
Sbjct: 23  NTNPILNPGNKPPE----YQEIKTPIKESDVVMR--------LRTETDIVLASNYFRSIA 70

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
               F H+   Y  MI   G+    D   + +  MK   +  + D F  ++  Y R GLA
Sbjct: 71  NSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLA 130

Query: 200 AEAVHAFNRMEEYGCA-----------------------------------PDKIAFSIV 224
            +A+  F R+ E+GC                                    P+   ++I+
Sbjct: 131 EQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNIL 190

Query: 225 ISILCRKRRASEAQSFFDSLKDK-------------------------------FEPDVI 253
           +  LC+  R   A      + +K                               F+P+V 
Sbjct: 191 LKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVS 250

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           VY  L+ G+CR   + E   +  +M   GI PNV TYS VI +L   G +  A  V+A+M
Sbjct: 251 VYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKM 310

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              GC PN  TF +LM+ +    R  + L ++N+M   G E + + YN LI   C  GK+
Sbjct: 311 FVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKM 370

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A+ V + M R GC+PN ST+  +    +K GD+ GA  ++ KM    C PN V Y  +
Sbjct: 371 GEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSM 430

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           + +   S        L ++M  +   PN  T+   I   C  G    A     +M +  C
Sbjct: 431 VNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGC 490

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             P    Y  VL  L +  ++++  ELV +M ++G 
Sbjct: 491 -SPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGM 525



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 187/389 (48%), Gaps = 5/389 (1%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDL--MKSRNVEITVDTFSILVRRYVRAGLAAE 201
           F  +  +Y+ +IN  G  R++ +   F+ L  M  + ++  V T+S ++      G    
Sbjct: 245 FQPNVSVYNALIN--GFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVEL 302

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
           A+  + +M   GC+P+   F+ ++     + R  EA + ++ + ++ FEP+V+ Y  L+ 
Sbjct: 303 ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIH 362

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C  G + EA  V  +M+  G  PNV TY  +ID   + G +  A +++ +M+  GC P
Sbjct: 363 GLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N + + +++ V  ++S   +   +  +M    C  +T+T+N  I   C  G++E AI + 
Sbjct: 423 NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLF 482

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M + GC+PN  T+N +   + K   +  A  +  +M++   E N VTYN +   F   
Sbjct: 483 CQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNV 542

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +  LKL  +M    V+P+  TY  L   YC  G    A + + ++       P  + 
Sbjct: 543 GKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAA 602

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y  +L  +     +++    ++KM++ G 
Sbjct: 603 YTSLLWGICNQIGVEEAVLYLDKMLNEGI 631



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 38/268 (14%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T+  L+  + +AG    A   +N+M   GC P+ + ++ ++++LCR    S+A S  +
Sbjct: 389 VSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIE 448

Query: 243 SLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  D   P+ + +   ++G C +G +  A  +F +M+  G  PN+ TY+ V+D L +  
Sbjct: 449 KMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKEN 508

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +I  A ++  EM E G E N +T+N +        + E+ L++  +M   G + D ITYN
Sbjct: 509 RIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYN 568

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKG----------------CNP--------------- 390
            L   +C  GK++ AI++L+ +   G                CN                
Sbjct: 569 TLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLN 628

Query: 391 -----NASTFNMIFRCI-SKLGDVNGAH 412
                NA+T+N + R + + LG +   H
Sbjct: 629 EGICLNAATWNALVRGLFNSLGHLGPIH 656



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 4/159 (2%)

Query: 143 EFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           ++  SP++  Y+E+++   K  +   A   +  M+ + +E+ + T++ +   +   G   
Sbjct: 487 QYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFE 546

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNL 258
           EA+    +M   G  PD I ++ +    C + +   A    D L    K+ P+V  YT+L
Sbjct: 547 EALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSL 606

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           + G C    + EA     +M   GI  N  T++ ++  L
Sbjct: 607 LWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 211/415 (50%), Gaps = 18/415 (4%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVDTF 186
           + L FFNW      + H+   Y  M+ + G+ R  + A +F+  ++ R+   V++    F
Sbjct: 94  KALQFFNWAQEMG-YTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+R + RAGL  E++  F  M+ +G +P  + F+ +++IL ++ R + A+  +D +  
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212

Query: 247 KF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            +   PD   +  L+RG+C  G + +  R+F ++   G +P+V TY+ ++D LCR G++T
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272

Query: 305 RAHDVFAEMLE--VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
            A++V   M +  V   PN +T+  L+R +      EK L V+ +M   G +A+ ITYN 
Sbjct: 273 VAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           LI   C+  K E    +L      G  +P+  TFN +  C    G+++ A +++ +M +L
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392

Query: 422 KCEPNTVTYNILMQMFATS----KSTDMVLKL---KKEMEENEVEPNVNTYRILITMYCG 474
           K +P++ TY+ L++         K+ D++ KL   K  +  +  +P V  Y  +    C 
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G    A K  R+++      P S  Y+ ++    + G  +   EL+  M+ + F
Sbjct: 453 TGKTKKAEKAFRQLMRRGTQDPPS--YKTLIMGHCKEGTFESGYELLVLMLRKDF 505



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 170/356 (47%), Gaps = 16/356 (4%)

Query: 144 FVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT--VDTFSILVRRYVRAGLA 199
           F   PD+  Y+ +++   +  +  +A++ +  M  ++V++   V T++ L+R Y      
Sbjct: 249 FGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREI 308

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTN 257
            +A+  F  M   G   + I ++ +I  LC  R+  + +   +       F PD   +  
Sbjct: 309 EKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNT 368

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV- 316
           L+   C AGN+ +A +VF  M    IQP+  TYS ++ +LC+ G   +A D+  ++LE  
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428

Query: 317 ------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
                 GC+P    +N + +   +  +T+K  + + Q+ R G + D  +Y  LI  HCK+
Sbjct: 429 ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKE 487

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G  E   ++L  M+RK   P+  T+  +   +  +     A +   KM      PN+ T+
Sbjct: 488 GTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTF 547

Query: 431 -NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
            +IL ++    ++++    ++  +++N +  N++     + +  G G  + A++ +
Sbjct: 548 HSILAKLLEQGRASESASLIQLMLDKN-IRQNLSFSTGCVRLLFGAGMNDKAFQLV 602


>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 181/364 (49%), Gaps = 5/364 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           +P  V  V+++     HG   LQ     +     P + HSP  +   +++A ++R F+ A
Sbjct: 68  TPDLVNKVMKRLWN--HGPKALQFFKHLD--RHHPSYTHSPSSFDHAVDIAARMRDFNSA 123

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           W  +  M+S  +  +  T +IL  RY   G    AV  F  M E+G   D  +F+ ++ I
Sbjct: 124 WALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDI 183

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           LC+ +R   A S   +L  +F PD + Y  L  G+C       A RV +EM   GI+P +
Sbjct: 184 LCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTM 243

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ ++    R  QI  A + + EM +  CE + +T+  ++     A   +K  +V+++
Sbjct: 244 VTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHE 303

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-CNPNASTFNMIFRCISKLG 406
           M + G   +  TYN LI   CK   +E+A+ V   M R+G C PN  T+N++ R +  +G
Sbjct: 304 MVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVG 363

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           D+  A     +M +        TYN++++ F  +   +  L++  +M +    PN++TY 
Sbjct: 364 DMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYN 423

Query: 467 ILIT 470
           +LI+
Sbjct: 424 VLIS 427



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 16/305 (5%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR-------EMKMAGIQPNVY 288
           +A  FF  L D+  P    YT+    +  A +I+   R F         M+   + P+  
Sbjct: 85  KALQFFKHL-DRHHPS---YTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPK 140

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T +I+ +     G+  RA   F  M E G   +  +FN L+ +  K+ R E     ++ +
Sbjct: 141 TLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVE---TAHSLL 197

Query: 349 KRLGCE--ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           K L      DT+TYN L + +C   +   A++VL  MV++G  P   T+N + +   +  
Sbjct: 198 KTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSN 257

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +  A   Y +MK  KCE + VTY  ++  F  +       ++  EM +  V PNV TY 
Sbjct: 258 QIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYN 317

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            LI + C      NA     EM  E    P    Y +V++ L   G +++    +E+M +
Sbjct: 318 ALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGE 377

Query: 527 RGFTA 531
            G  A
Sbjct: 378 HGLRA 382


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 181/379 (47%), Gaps = 1/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I      ++ D A    + +K+      V  ++ ++   ++AG   + +  F  M 
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
              C P +  +++VI  LC+ +   +A   F+ +  K   PD I YT L+ G+ +A  + 
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++   M   G +P   TY  ++   C+   I  A +V A+M E GCEP    F +L+
Sbjct: 486 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             ++   R E+  QV  +M   GC  D I Y  LID     G++ +A  V +SM+ KGC 
Sbjct: 546 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 605

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A T+  I +  SK+G+V  A  +   M      P+   YN LM  +   +  D    +
Sbjct: 606 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 665

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M  + ++PN  T+ +L+      G  + A+   +EM+E+  + P    Y +++  L 
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLG 725

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +AG++ +     ++M+DRG
Sbjct: 726 KAGRVSEAFSQFQEMIDRG 744



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 166/346 (47%), Gaps = 6/346 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           + T++ILV  + RA    +A+  F  +  YGC P+   ++ +I  L   +R  EA++FFD
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
                   DVI YT +++G   +  I EA  +F ++K AG  PNV  Y+ VID L + G+
Sbjct: 359 E-----ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           I      F +M    C P   T+  ++    KA       +V+ QM + GC  DTITY  
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTT 473

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LID   K  K+++A K+L+ M+ KG  P A T+  I     KL  +N A  +  +M++  
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 533

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           CEP    +  L+  + +    +   ++  EM      P+V  Y  LI +    G    A 
Sbjct: 534 CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEAR 593

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                MIE+ C  P +  Y  ++Q   + G ++   E++E M   G
Sbjct: 594 HVFDSMIEKGC-APDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 638



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 192/447 (42%), Gaps = 67/447 (14%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+ +  I L G  K R+ D A      M S   E T+ +++ ++          EA   
Sbjct: 18  PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
           FN M + GC PD IAF+ +I   C+  +        +    +F PDV +YT+++ G+C+A
Sbjct: 78  FNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKA 137

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G++    ++  EM  AG  P+   Y ++ID LC+ G++  A+++F  M + GC  + +TF
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLG---------------CEADT------------- 357
             L+       + ++  ++Y +M   G               C+A               
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257

Query: 358 -------ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                  + YN L+D +CK G+++D +K+L  MV     P+  T+N++    S+   ++ 
Sbjct: 258 KKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDD 317

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQ-----------------------------MFATSK 441
           A  ++  +    C+PN  TY  ++Q                               A SK
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSK 377

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             D   +L ++++     PNV  Y  +I      G   +  K   +M    C+ P  + Y
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCV-PTRTTY 436

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +V+  L +A  L    ++ E+MV +G
Sbjct: 437 TVVIDGLCKAQMLPDACKVFEQMVQKG 463



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 168/365 (46%), Gaps = 3/365 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A   +D+M ++  E T  T+  +V  + +  +  EA     +M 
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC P    F+ ++S    K RA EA      +  +   PDVI+YT+L+      G + 
Sbjct: 531 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  VF  M   G  P+  TY  +I    + G +  A ++   M + G  P+   +N+LM
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-C 388
             +VK  R ++   VY++M   G + + +T+N L+    KDGK + A  +   M+ K   
Sbjct: 651 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEV 710

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   ++ ++   + K G V+ A   + +M D    P   TY  L+   A +       K
Sbjct: 711 PPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK 770

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L ++M +  V P+V  Y  LIT        + A+   +EM++  C  P    Y+++ +  
Sbjct: 771 LVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGC-APNEVTYKVLRRGF 829

Query: 509 RRAGQ 513
           R AG+
Sbjct: 830 RAAGR 834



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 165/362 (45%), Gaps = 38/362 (10%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKR---------------------------- 232
           EA+     M   G  PD +  +IV++ LC+ R                            
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62

Query: 233 -------RASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
                  +  EA  FF+S+ D   EPDVI +T L+ G+C+AG   +   +     +   +
Sbjct: 63  SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFR 121

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+V+ Y+ VI   C+ G +     +  EML  GC P++  +  L+    K  R ++  ++
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + +M++ GC  D +T+  LI+     GKL++A ++   M+ +G  P     + +   + K
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCK 241

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G V+ A+ +Y  +   K   + V YN LM  +      D  LKL  +M E +  P++ T
Sbjct: 242 AGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQT 301

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y IL+  +      ++A +  + +    C KP ++ Y  ++Q L  A ++++ +   ++ 
Sbjct: 302 YNILVAGFSRANRLDDALELFKLLSSYGC-KPNAATYTTIIQGLYDAQRMEEAKAFFDEA 360

Query: 525 VD 526
           +D
Sbjct: 361 LD 362



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 154/333 (46%), Gaps = 38/333 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K+   + A   I  M+ R  E  +  F+ L+  Y+  G A EA      M 
Sbjct: 506 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             GCAPD I ++ +I +L    R  EA+  FDS+ +K   PD + Y  +++ + + GN+ 
Sbjct: 566 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 625

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +   M  +G+ P+ + Y+ ++D   +  ++ +A  V+  M+  G +PN++TFN LM
Sbjct: 626 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 685

Query: 330 RVHVKASRTEKVLQVYNQM-KRLGCEADTITYNFLID----------------------- 365
               K  +T++   ++ +M ++       ++Y  LID                       
Sbjct: 686 HGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745

Query: 366 ---CH---------CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
              CH          K G++ +A K++  MV+ G NP+   ++ +   +     V+ A  
Sbjct: 746 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 805

Query: 414 MYGKMKDLKCEPNTVTYNILMQMF-ATSKSTDM 445
           ++ +M    C PN VTY +L + F A  ++ D+
Sbjct: 806 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 838



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 35/293 (11%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA    +EM   G+ P+V   +IV++ LC+  +I +A ++F EM  +GCEP  +++N 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID--C------------------- 366
           ++       + ++  + +N M   GCE D I +  LI   C                   
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 367 -------------HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
                        +CK G L+   K+L  M+  GC P+A+ + ++   + KLG V+ A+ 
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++ +M+   C  + VT+  L++  +     D   +L +EM E   EP +     LI   C
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
             G  + A +  + ++ +K +      Y  ++    + G++    +L+ +MV+
Sbjct: 241 KAGKVDEANEIYQTVVAKK-VATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE 292



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 22/256 (8%)

Query: 113 RHV----IEKSCG---VRHGIPLLQVLSFFNWVTARPEFVH-------SPDL--YHEMIN 156
           RHV    IEK C    + +G  ++Q  S    V A  E +         PD   Y+ +++
Sbjct: 593 RHVFDSMIEKGCAPDALTYGT-IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 651

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYGCA 215
              K+ + D A+   D M +  ++    TF++L+    + G    A   F  M E+    
Sbjct: 652 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVP 711

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
           P  ++++I+I  L +  R SEA S F  + D+   P+   YT+L+    +AG I EA+++
Sbjct: 712 PTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 771

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             +M   G+ P+V  YS +I  L     +  A DVF EM++ GC PN +T+  L R    
Sbjct: 772 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRA 831

Query: 335 ASRT---EKVLQVYNQ 347
           A R    E V Q ++Q
Sbjct: 832 AGRALDLEAVKQHFSQ 847



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 6/227 (2%)

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A D   EM   G  P+ +  N ++    KA + +K ++++ +M  +GCE   ++YN +I
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK-MKDLKC 423
                  K+++A K  NSM+  GC P+   F  +     K G     H +  + +K  + 
Sbjct: 63  SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR- 121

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+   Y  ++  +  +   D   K+ +EM      P+   Y +LI   C +G  + AY+
Sbjct: 122 -PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 484 YIREMIEEKCLKPGSSVYEMVL-QQLRRAGQLQKHEELVEKMVDRGF 529
               M +  CL  G  V  M L + L   G+L +  EL  +M++RG+
Sbjct: 181 LFERMRKSGCL--GDYVTFMTLIEALSNHGKLDEACELYREMIERGY 225


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 211/415 (50%), Gaps = 18/415 (4%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVDTF 186
           + L FFNW      + H+   Y  M+ + G+ R  + A +F+  ++ R+   V++    F
Sbjct: 94  KALQFFNWAQEMG-YTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+R + RAGL  E++  F  M+ +G +P  + F+ +++IL ++ R + A+  +D +  
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212

Query: 247 KF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            +   PD   +  L+RG+C  G + +  R+F ++   G +P+V TY+ ++D LCR G++T
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272

Query: 305 RAHDVFAEMLE--VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
            A++V   M +  V   PN +T+  L+R +      EK L V+ +M   G +A+ ITYN 
Sbjct: 273 VAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           LI   C+  K E    +L      G  +P+  TFN +  C    G+++ A +++ +M +L
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392

Query: 422 KCEPNTVTYNILMQMFATS----KSTDMVLKL---KKEMEENEVEPNVNTYRILITMYCG 474
           K +P++ TY+ L++         K+ D++ KL   K  +  +  +P V  Y  +    C 
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G    A K  R+++      P S  Y+ ++    + G  +   EL+  M+ + F
Sbjct: 453 TGKTKKAEKAFRQLMRRGTQDPPS--YKTLIMGHCKEGTFESGYELLVLMLRKDF 505



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 163/355 (45%), Gaps = 14/355 (3%)

Query: 144 FVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT--VDTFSILVRRYVRAGLA 199
           F   PD+  Y+ +++   +  +  +A++ +  M  ++V++   V T++ L+R Y      
Sbjct: 249 FGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREI 308

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTN 257
            +A+  F  M   G   + I ++ +I  LC  R+  + +   +       F PD   +  
Sbjct: 309 EKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNT 368

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV- 316
           L+   C AGN+ +A +VF  M    IQP+  TYS ++ +LC+ G   +A D+  ++LE  
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428

Query: 317 ------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
                 GC+P    +N + +   +  +T+K  + + Q+ R G + D  +Y  LI  HCK+
Sbjct: 429 ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKE 487

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G  E   ++L  M+RK   P+  T+  +   +  +     A +   KM      PN+ T+
Sbjct: 488 GTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTF 547

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + ++        T     L + M +  +  N++     + +  G G  + A++ +
Sbjct: 548 HSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLV 602


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 179/357 (50%), Gaps = 6/357 (1%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           L+ S  V     T++ L+R     G  A+A+   + M   GC P+ + +++++  +CR  
Sbjct: 133 LIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNS 192

Query: 233 RASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
              +A +  D ++ K   P+++ Y  ++ G CR G + +A  +   +   G QP+  +Y+
Sbjct: 193 GFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYT 252

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            ++  LC   +     ++FAEM+E  C PN +TF+ L+R   +    E+ +QV  QM   
Sbjct: 253 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           GC  +T   N +I+  CK G+++DA K+LN M   GCNP+  ++  + + + +    + A
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDA 372

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  +M    C PN VT+N  + +       +  + L ++M E+     V TY  L+  
Sbjct: 373 KELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +C  GH ++A +  R M    C KP +  Y  +L  L  A +L    ELV +M+ RG
Sbjct: 433 FCVQGHIDSALELFRSM---PC-KPNTITYTTLLTGLCNAERLDGAAELVAEML-RG 484



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 178/365 (48%), Gaps = 5/365 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  R  +  V T+++L+    R     +A+   + M   GC P+ + ++++I+
Sbjct: 162 ALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 221

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            +CR+ R  +A+   + L    F+PD + YT L++G C +    + E +F EM      P
Sbjct: 222 GMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP 281

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  T+ ++I   CR G + RA  V  +M E GC  N+   N ++    K  R +   ++ 
Sbjct: 282 NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL 341

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M   GC  DTI+Y  ++   C+  + +DA ++LN MVR  C PN  TFN     + + 
Sbjct: 342 NDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQK 401

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  +  +M +  C    VTYN L+  F      D  L+L + M     +PN  TY
Sbjct: 402 GLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITY 458

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+T  C     + A + + EM+   C  P    + +++    + G L++  ELVE+M+
Sbjct: 459 TTLLTGLCNAERLDGAAELVAEMLRGDC-PPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517

Query: 526 DRGFT 530
           + G T
Sbjct: 518 EHGCT 522



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 175/340 (51%), Gaps = 10/340 (2%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           +RR +     A AV    R     G APD    + +I  LCR+ R S+A     + +   
Sbjct: 47  LRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 106

Query: 249 EP-DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            P DV  Y  LV G+CR G++  A R+   M +A   P+ YTY+ +I  LC  G++  A 
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADAL 163

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +  +ML  GC+PN +T+  L+    + S  E+ + V ++M+  GC  + +TYN +I+  
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR--CISKLGDVNGAHRMYGKMKDLKCEP 425
           C++G+++DA ++LN +   G  P+  ++  + +  C SK  D      ++ +M +  C P
Sbjct: 224 CREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWD--DVEELFAEMMEKNCMP 281

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N VT+++L++ F      +  +++ ++M E+    N     I+I   C  G  ++A+K +
Sbjct: 282 NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL 341

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            +M    C  P +  Y  VL+ L RA +    +EL+ +MV
Sbjct: 342 NDMGSYGC-NPDTISYTTVLKGLCRAERWDDAKELLNEMV 380



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 160/342 (46%), Gaps = 3/342 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+R   R G  ++A       E  G   D  A++ +++  CR      A+    S+    
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP--V 139

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD   YT L+R  C  G +++A  +  +M   G QPNV TY+++++A+CR     +A  
Sbjct: 140 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMA 199

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  EM   GC PN +T+N ++    +  R +   ++ N++   G + DT++Y  L+   C
Sbjct: 200 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLC 259

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
              + +D  ++   M+ K C PN  TF+M+ R   + G V  A ++  +M +  C  NT 
Sbjct: 260 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT 319

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             NI++         D   KL  +M      P+  +Y  ++   C    W++A + + EM
Sbjct: 320 LCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEM 379

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +   C  P    +   +  L + G +++   L+E+M + G T
Sbjct: 380 VRNNC-PPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCT 420



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 192/432 (44%), Gaps = 44/432 (10%)

Query: 142 PEFVHSPDL--YHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           P +   PD   Y  ++  L    R  D+   F ++M+ +N      TF +L+R + R G+
Sbjct: 240 PSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMME-KNCMPNEVTFDMLIRFFCRGGM 298

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTN 257
              A+    +M E+GCA +    +IVI+ +C++ R  +A    + +      PD I YT 
Sbjct: 299 VERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTT 358

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           +++G CRA    +A+ +  EM      PN  T++  I  LC+ G I +A  +  +M E G
Sbjct: 359 VLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG 418

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
           C    +T+N L+         +  L+++  M    C+ +TITY  L+   C   +L+ A 
Sbjct: 419 CTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAA 475

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           +++  M+R  C PN  TFN++     + G +  A  +  +M +  C PN +TYN L+   
Sbjct: 476 ELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGI 535

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY------------------------- 472
               S++  L+L   +    V P+V T+  +I +                          
Sbjct: 536 TKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKA 595

Query: 473 ----------CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
                     C     +NA  +   M+   C+ P  S Y ++++ L   G L++ ++L+ 
Sbjct: 596 VVYNKILLGLCKRCEIDNAIDFFAYMVSNGCM-PNESTYIILIEGLAHEGLLKEAQDLLS 654

Query: 523 KMVDRGFTARPL 534
            +  RG   + L
Sbjct: 655 VLCSRGVLNKNL 666



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 141/283 (49%), Gaps = 4/283 (1%)

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           D   PDV + T L+R  CR G  S+A RV R  + +G   +V+ Y+ ++   CR G +  
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +   M      P++ T+  L+RV     R    L + + M R GC+ + +TY  L++
Sbjct: 130 ARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C++   E A+ VL+ M  KGC PN  T+N+I   + + G V+ A  +  ++     +P
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +TV+Y  L++    SK  D V +L  EM E    PN  T+ +LI  +C  G    A + +
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 306

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +M E  C    +++  +V+  + + G++    +L+  M   G
Sbjct: 307 EQMTEHGC-ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 168/380 (44%), Gaps = 38/380 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   +  + D A   ++ + S   +    +++ L++    +    +    F  M 
Sbjct: 216 YNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMM 275

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           E  C P+++ F ++I                                  R +CR G +  
Sbjct: 276 EKNCMPNEVTFDMLI----------------------------------RFFCRGGMVER 301

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A +V  +M   G   N    +IVI+++C+ G++  A  +  +M   GC P++I++  +++
Sbjct: 302 AIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK 361

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              +A R +   ++ N+M R  C  + +T+N  I   C+ G +E AI ++  M   GC  
Sbjct: 362 GLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
              T+N +       G ++ A  ++   + + C+PNT+TY  L+     ++  D   +L 
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELV 478

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            EM   +  PNV T+ +L++ +C  G    A + + +M+E  C  P    Y  +L  + +
Sbjct: 479 AEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGC-TPNLITYNTLLDGITK 537

Query: 511 AGQLQKHEELVEKMVDRGFT 530
               +   EL+  +V +G +
Sbjct: 538 DCSSEDALELLHGLVSKGVS 557



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 84/222 (37%), Gaps = 40/222 (18%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L  F  +  +P  +    L   + N      + D A   +  M   +    V TF++LV 
Sbjct: 443 LELFRSMPCKPNTITYTTLLTGLCN----AERLDGAAELVAEMLRGDCPPNVVTFNVLVS 498

Query: 192 RYVRAGLAAEAVHAFNRMEEYGC-----------------------------------AP 216
            + + G   EA+    +M E+GC                                   +P
Sbjct: 499 FFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSP 558

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D I FS +I IL ++ R  EA   F  ++D    P  +VY  ++ G C+   I  A   F
Sbjct: 559 DVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFF 618

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
             M   G  PN  TY I+I+ L   G +  A D+ + +   G
Sbjct: 619 AYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 188/352 (53%), Gaps = 2/352 (0%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           ++  FS  V+   +     +A+   + M   G  PD + ++++I+ +C++ R  EA  F 
Sbjct: 81  SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140

Query: 242 DSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           +++     +P+VI +  ++R  C  G   +AE++  +M   G  P+V T++I+I+ LCR 
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G + RA D+  +M   GC PNS+++N L+    K  + ++ ++  + M   GC  D +TY
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N L+   CKDGK++ A+++LN +  KGC+P   T+N +   +SK+G    A ++  +M+ 
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              +P+ +TY+ L+   +     D  +K   ++E   + PN  TY  ++   C     + 
Sbjct: 321 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 380

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           A  ++  MI ++C KP  + Y ++++ +   G  ++  +L+ ++  RG   +
Sbjct: 381 AIDFLAYMISKRC-KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 431



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 1/334 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M+++  +  V T+++L+    + G   EA+   N M  YGC P+ I  +I++ 
Sbjct: 101 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 160

Query: 227 ILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            +C   R  +A+    D L+    P V+ +  L+   CR G +  A  +  +M M G  P
Sbjct: 161 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 220

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  +Y+ ++   C+  ++ RA +    M+  GC P+ +T+N L+    K  + +  +++ 
Sbjct: 221 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 280

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           NQ+   GC    ITYN +ID   K GK E AIK+L+ M RKG  P+  T++ +   +S+ 
Sbjct: 281 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 340

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V+ A + +  ++ L   PN +TYN +M     S+ TD  +     M     +P   TY
Sbjct: 341 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 400

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            ILI      G    A   + E+     +K  S+
Sbjct: 401 TILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 153/309 (49%), Gaps = 3/309 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K  + D A  F++ M S   +  V T +I++R     G   +A   
Sbjct: 115 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 174

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
            + M   GC+P  + F+I+I+ LCR+     A    + +      P+ + Y  L+ G+C+
Sbjct: 175 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCK 234

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +  A      M   G  P++ TY+ ++ ALC+ G++  A ++  ++   GC P  IT
Sbjct: 235 EKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLIT 294

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    K  +TE+ +++ ++M+R G + D ITY+ L+    ++GK+++AIK  + + 
Sbjct: 295 YNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 354

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  PNA T+N I   + K    + A      M   +C+P   TY IL++  A      
Sbjct: 355 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 414

Query: 445 MVLKLKKEM 453
             L L  E+
Sbjct: 415 EALDLLNEL 423



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 1/142 (0%)

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
           S F+   +   K   V  A ++  +M++   +P+ VTYN+L+         D  +K    
Sbjct: 83  SGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 142

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M     +PNV T+ I++   C  G W +A K + +M+ + C  P    + +++  L R G
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC-SPSVVTFNILINFLCRQG 201

Query: 513 QLQKHEELVEKMVDRGFTARPL 534
            L +  +++EKM   G T   L
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSL 223



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   KV + + A   +D M+ + ++  + T+S LV    R G   EA+  F+ +E
Sbjct: 295 YNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 354

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ I ++ ++  LC+ R+   A  F   +  K  +P    YT L+ G    G   
Sbjct: 355 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 414

Query: 270 EAERVFREMKMAGI 283
           EA  +  E+   G+
Sbjct: 415 EALDLLNELCSRGL 428


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 195/382 (51%), Gaps = 2/382 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  +   A   + +MK++ +      ++ L+  + ++G  +     F+ M+
Sbjct: 325 YNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMK 384

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
                PD + ++ +I  LC+  +  EA+  F  +  K  +PD + YT L+ G+C+AG + 
Sbjct: 385 RKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMK 444

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  +M   G+ PNV TY+ ++D LC+CG++  A+++  EM E G +PN  T+N L+
Sbjct: 445 EAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALI 504

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K    E+ +++  +M   G   DTITY  ++D +CK G++  A ++L  M+ KG  
Sbjct: 505 NGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQ 564

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   TFN++       G +    R+   M D    PN  T+N LM+ +    +    +++
Sbjct: 565 PTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEI 624

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            K M    V P+ NTY ILI  +C   +   A+   +EM+ EK     ++ Y  +++   
Sbjct: 625 YKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMV-EKGFSLTAASYNSLIKGFY 683

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
           +  + ++  +L E+M   GF A
Sbjct: 684 KRKKFEEARKLFEEMRTHGFIA 705



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 206/418 (49%), Gaps = 43/418 (10%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA--GLAAEAVHAF 206
           D++ +++  AG + +   A    D + +  V ++VD+ ++ + R   +  G+   A   F
Sbjct: 185 DVFFQVLVEAGLLLE---AGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRT-AFRVF 240

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRA 265
               E G   + ++++I++ +LC+  +  EA S    ++ +   PDV+ Y+ +V G+C+ 
Sbjct: 241 REYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQV 300

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV---------------- 309
             + +  ++  E++  G++PN YTY+ +I  LC+ G++  A  V                
Sbjct: 301 EQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVY 360

Query: 310 -------------------FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
                              F EM      P+ +T+ +++    +A +  +  +++++M  
Sbjct: 361 TTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLS 420

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G + D +TY  LID +CK G++++A  + N MV KG  PN  T+  +   + K G+V+ 
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDI 480

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A+ +  +M +   +PN  TYN L+       + +  +KL +EM+     P+  TY  ++ 
Sbjct: 481 ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            YC MG    A++ +R M+ +K L+P    + +++     +G L+  E L++ M+D+G
Sbjct: 541 AYCKMGEMAKAHELLRIML-DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 170/354 (48%), Gaps = 6/354 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+FV    + H +   AGKV +   A      M S+ ++    T++ L+  Y +AG   E
Sbjct: 390 PDFVTYTSMIHGLCQ-AGKVVE---ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKE 445

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
           A    N+M E G  P+ + ++ ++  LC+      A      + +K  +P+V  Y  L+ 
Sbjct: 446 AFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALIN 505

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C+ GNI +A ++  EM +AG  P+  TY+ ++DA C+ G++ +AH++   ML+ G +P
Sbjct: 506 GLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP 565

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
             +TFN LM     +   E   ++   M   G   +  T+N L+  +C    +   I++ 
Sbjct: 566 TIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIY 625

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M  +G  P+ +T+N++ +   K  ++  A  ++ +M +        +YN L++ F   
Sbjct: 626 KGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKR 685

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           K  +   KL +EM  +        Y I + +    G+W N  +   E I EKCL
Sbjct: 686 KKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAI-EKCL 738



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 148/395 (37%), Gaps = 92/395 (23%)

Query: 225 ISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNL-VR----------GWCR--------- 264
           IS   ++RRA   +      + KF PD +++  + +R           W R         
Sbjct: 68  ISTTIKQRRAEPFRRILKPFESKFRPDHLIWVLMSIRDDYKLVLDFFDWARLRRDPSLES 127

Query: 265 -------------------------------AGNISE--AERVFREMKMAGIQPNVYTYS 291
                                           GN  +   ER+    K  G  P V  + 
Sbjct: 128 LCIVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFDRFTERLIYTYKDWGAHPLV--FD 185

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN-NLMRVHVKASRTEKVLQVYNQMKR 350
           +    L   G +  A  +F ++L  G   +  + N  L R+           +V+ +   
Sbjct: 186 VFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSE 245

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDA---------------------------------- 376
           +G   +T++YN ++   C+ GK+++A                                  
Sbjct: 246 VGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGK 305

Query: 377 -IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            +K++  + RKG  PN  T+N I   + K G V  A ++   MK+ +  P+ V Y  L+ 
Sbjct: 306 VLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLIS 365

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            F  S +  +  KL  EM+  ++ P+  TY  +I   C  G    A K   EM+  K LK
Sbjct: 366 GFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML-SKGLK 424

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           P    Y  ++    +AG++++   L  +MV++G T
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLT 459


>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 505

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 215/426 (50%), Gaps = 14/426 (3%)

Query: 99  SQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLA 158
           S  ST   +S   +  V+ K     HG PL Q L FF +   R  F H+P     ++ + 
Sbjct: 58  SLTSTGIFLSNDLIDKVL-KRVRFSHGNPL-QALEFFYYTDNRKGFYHTPYSLDTILYIL 115

Query: 159 GKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           G+ R+FD  W  +  MK ++   I+  T  I++ R  +     + V +F + +++    D
Sbjct: 116 GRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLCSVRQTVESFRKFKKFVSVLD 175

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
              F+ ++  LC+++  ++A++ +  LK +F+P++  +  L+ GW ++    EAE  F E
Sbjct: 176 TTCFNALLRTLCQEKSMTDARNVYHRLKKEFKPNLQTFNILLSGWKQS---EEAELFFEE 232

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+  GI+P+V +Y+ +ID  C+  ++ +A+ V  +M E    P+ IT+ +++       +
Sbjct: 233 MRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQ 292

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +K   + N+MK  GC  D   YN +I  +C   +L DA  +++ M  KG +PNA+T+N+
Sbjct: 293 PDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNL 352

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
            FR      D+  +  +Y +M +  C PNT +   L+++F   +  +M L L  +M E  
Sbjct: 353 FFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKG 412

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE--MVLQQLRRAGQLQ 515
               +    +L  + C MG    A K   +MI EK  KP +  +    VL +L     + 
Sbjct: 413 FGSYILVSDVLFDLLCDMGKLVEAEKCFLQMI-EKGHKPSNVSFRRIKVLMEL-----VN 466

Query: 516 KHEELV 521
           KH+ L+
Sbjct: 467 KHDALL 472



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 4/272 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           + TF+IL+  + ++    EA   F  M E G  PD ++++ +I + C+ R   +A    +
Sbjct: 210 LQTFNILLSGWKQS---EEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVE 266

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            ++++   PDVI YT+++ G    G   +A  +  EMK  G  P+V  Y+ VI   C   
Sbjct: 267 KMREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAK 326

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A ++  EM   G  PN+ T+N   RV   ++       +Y +M   GC  +T +  
Sbjct: 327 RLGDASNLMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCM 386

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           FLI    K  K+E A+ + N MV KG        +++F  +  +G +  A + + +M + 
Sbjct: 387 FLIRLFRKHEKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEK 446

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
             +P+ V++  +  +       D +L L+K+M
Sbjct: 447 GHKPSNVSFRRIKVLMELVNKHDALLNLQKKM 478



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 104/243 (42%), Gaps = 38/243 (15%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I++  K R+ + A+  ++ M+  ++   V T++ ++      G   +A   
Sbjct: 240 PDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQPDKARDI 299

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N M+EYGC PD  A++ VI   C  +R  +A +  D +  K   P+   Y    R +  
Sbjct: 300 LNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYW 359

Query: 265 AGNISEAERVFREMKMAGIQPN-----------------------------------VYT 289
           + ++  +  ++R M  +G  PN                                   +  
Sbjct: 360 SNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKGFGSYILV 419

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
             ++ D LC  G++  A   F +M+E G +P++++F  +  +    ++ + +L +  +M 
Sbjct: 420 SDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSFRRIKVLMELVNKHDALLNLQKKMA 479

Query: 350 RLG 352
             G
Sbjct: 480 IFG 482


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 191/386 (49%), Gaps = 4/386 (1%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y    +I    KVR  + A   ++ M+     + V T++ L+    RAG   EA  
Sbjct: 240 SPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFG 299

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
               ME+YG  PD   +  +I+ LC++ R  +A+   D +      P+V+VY+ L+ G+ 
Sbjct: 300 YKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFM 359

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R GN  EA ++ +EM  AG+QPN  TY  +I  LC+ G++ RA  +  +M ++G   +++
Sbjct: 360 RQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTM 419

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N ++  H++    E+   + N+M++ G   +  TY+ +I+  C+ G+ E A  +L  M
Sbjct: 420 TYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +  G  PNA  +  +     + G  + A     KM      P+   YN L+   +     
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  ++   EM E   +PN  TY  LI  Y   G+   A + + +M+    L P   +Y  
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSG-LNPNDFIYAQ 598

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           +L+   ++  L+K    ++ M+++G 
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGL 624



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 2/363 (0%)

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           W     M+   +   V T+S L+  Y +      A      M E GC+ + + ++ +I  
Sbjct: 228 WKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287

Query: 228 LCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           LCR     EA  +   ++D    PD   Y  ++ G C+ G   +A+ +  EM  AG+ PN
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           V  YS +ID   R G    A  +  EM   G +PN IT++NL+R   K  R  +  ++  
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           QM ++G  ADT+TYN +I+ H +    E+A  +LN M + G +PN  T+++I   + ++G
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +   A  +  +M     +PN   Y  L+  +    S  +  +  K+M    + P++  Y 
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYN 527

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            LI     +G  + A +Y  EM+ EK  +P    Y  ++     AG L+K E+L+ +M++
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEML-EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLN 586

Query: 527 RGF 529
            G 
Sbjct: 587 SGL 589



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 169/382 (44%), Gaps = 37/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++++  ++R     EA    N M + G +P+   +SI+I+ LC+   +  A    + +
Sbjct: 420 TYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             D  +P+  VY  L+ G+CR G+ S A    ++M    + P++Y Y+ +I  L   G++
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A + + EMLE G +PN  T+  L+  +  A   EK  Q+ +QM   G   +   Y  +
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQI 599

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++ + K   LE     L SM+ KG  P+   + ++   +S  G +  A  +   ++    
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN-------------------- 463
            P+++ Y  L+  F  +   +  + L  EM +  +EP ++                    
Sbjct: 660 VPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARN 719

Query: 464 ---------------TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
                          TY  LI  YC  G   +A     EM+ E  + P + VY ++    
Sbjct: 720 IFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG-VAPDAFVYSVLAAGC 778

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
             +G LQ+   + E+M+ RG+ 
Sbjct: 779 SNSGDLQQALFITEEMIARGYA 800



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 1/283 (0%)

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             PDV  Y+ L+  +C+  ++  A++V  EM+  G   NV TY+ +I  LCR G I  A 
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
               EM + G  P+  T+  ++    K  R ++   + ++M   G   + + Y+ LID  
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
            + G  ++A K++  M   G  PN  T++ + R + KLG +  A R+  +M  +    +T
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           +TYN++++      + +    L  EM +  + PNV TY I+I   C +G    A   + +
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           MI +  LKP + VY  ++    R G      E ++KM     T
Sbjct: 479 MIADG-LKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT 520



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/384 (22%), Positives = 171/384 (44%), Gaps = 5/384 (1%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++Y   I + G  ++ + + A   ++ M +  ++     ++ L+  Y R G  + A  
Sbjct: 450 SPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACE 509

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
              +M      PD   ++ +I  L    +  EA  ++D + +K F+P+   Y  L+ G+ 
Sbjct: 510 TLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYS 569

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AGN+ +AE++  +M  +G+ PN + Y+ +++   +   + +       MLE G  P++ 
Sbjct: 570 MAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNR 629

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +  ++     +   +  + V + +++ G   D++ Y  LI   CK   +E A+ +L+ M
Sbjct: 630 LYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEM 689

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            +KG  P  S +N +     K  D++ A  ++  +      PN VTY  L+  +  +   
Sbjct: 690 AKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDI 749

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              + L  EM    V P+   Y +L       G    A     EMI        S  +  
Sbjct: 750 RDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISS--FNT 807

Query: 504 VLQQLRRAGQLQKHEELVEKMVDR 527
           ++    + G+LQ+  + +  M+D+
Sbjct: 808 LVHGFCKRGKLQETVKFLHVMMDK 831



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 153/348 (43%), Gaps = 33/348 (9%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT---------------FSILVRRYV 194
           L H+M+N       F  A       KS N+E    T               + I++    
Sbjct: 580 LLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLS 639

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI 253
            +G    AV   + +E+ G  PD + +  +IS  C+     +A    D +  K  EP + 
Sbjct: 640 SSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGIS 699

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y  L+ G+C++ +IS A  +F  +   G+ PN  TY+ +ID  C+ G I  A D++ EM
Sbjct: 700 CYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           L  G  P++  ++ L      +   ++ L +  +M   G  A   ++N L+   CK GKL
Sbjct: 760 LTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG-YAIISSFNTLVHGFCKRGKL 818

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           ++ +K L+ M+ K   P+  T   I   + + G ++ AH ++ +++              
Sbjct: 819 QETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQ-------------- 864

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            Q  A+ + TD +  L  +M    + P ++    +I  +C  G+ + A
Sbjct: 865 -QKNASHRDTDHLSSLFTDMINQGLVP-LDVIHNMIQSHCKQGYLDKA 910



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 6/267 (2%)

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           +V   LV  + + G + +   V   MK  G+ P++   + ++  L R   +     V   
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   G  P+  T++ L+  + K    E   +V  +M+  GC  + +TYN LI   C+ G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +E+A      M   G  P+  T+  I   + K G  + A  +  +M      PN V Y+ 
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F    + D   K+ KEM    V+PN  TY  LI   C +G    A + +++M +  
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            +   +  Y +V++     G L++H +
Sbjct: 414 YMAD-TMTYNLVIE-----GHLRQHNK 434



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 16/203 (7%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+  Y +AG   +A+  +N M   G APD   +S++ +         +A    + +
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
             +    +  +  LV G+C+ G + E  +    M    I P++ T   ++  L   G+++
Sbjct: 795 IARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLS 854

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            AH +F E               L + +     T+ +  ++  M   G     + +N +I
Sbjct: 855 EAHTIFVE---------------LQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN-MI 898

Query: 365 DCHCKDGKLEDAIKVLNSMVRKG 387
             HCK G L+ A+ + +++V KG
Sbjct: 899 QSHCKQGYLDKALMLHDALVAKG 921


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 192/384 (50%), Gaps = 18/384 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y E+I       + + A+     MK   V   V T++IL+  + +AG+  +A 
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
           +  + M   GC P  + ++ +I    + ++ S A   F+ +  K   P+VI YT L+ G+
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 263 CRAGNISEAERVFREMKM----------------AGIQPNVYTYSIVIDALCRCGQITRA 306
           C++GNI +A +++  M+                    +PNV TY  ++D LC+  ++  A
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            D+   M   GCEPN+I ++ L+    KA++ ++  +V+++M   G   +  TY+ LID 
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDR 724

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             KD +L+  +KVL+ M+   C PN   +  +   +SK+   + A+++   M++  C+PN
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VTY  ++  F  +   D  L+L +EM      PN  TY +LI   C  GH + AY  + 
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLE 844

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRR 510
           EM +    K  SS Y  V++  +R
Sbjct: 845 EMKQTYWPKHVSS-YCKVIEGYKR 867



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 18/349 (5%)

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
           G   +A    + M   G  PD   +S VI  LC   R   A   F  +K     PDV  Y
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
           T L+  + +AG I +A     EM   G +P V TY+ +I A  +  +++ A+++F  M+ 
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK----------------RLGCEADTIT 359
            GC PN IT+  L+  + K+   EK  Q+Y +M+                 +  + + +T
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y  L+D  CK  K++DA  +L +M   GC PN   ++ +     K   ++ A  ++ KM 
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +    PN  TY+ L+      K  D+VLK+  +M EN   PN+  Y  +I     +   +
Sbjct: 708 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            AYK +  M+EEK  KP    Y  ++    +AG++ K  EL  +M  +G
Sbjct: 768 EAYKLML-MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 182/415 (43%), Gaps = 30/415 (7%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           + +FV +  LY++MI+   +   F+ A  F++ M+S +    V T+ IL+   +      
Sbjct: 301 KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLG 360

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
                 + M   GC P    F+ ++   C+    S A      + K + +P  +VY  L+
Sbjct: 361 RCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILI 420

Query: 260 RGWCRAGNISE------AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
              C  G +        AE+ + EM  AG   N          LC  G+  +A+ V  EM
Sbjct: 421 GSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM 480

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           +  G  P++ T++ ++     ASR E    ++ +MK  G   D  TY  LIDC  K G +
Sbjct: 481 MGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGII 540

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A   L+ MVR GC P   T+  +     K   V+ A+ ++  M    C PN +TY  L
Sbjct: 541 KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTAL 600

Query: 434 MQMFATSKS-------------------TDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  +  S +                    DM  K+K  + E   +PNV TY  L+   C 
Sbjct: 601 IDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE---KPNVVTYGALVDGLCK 657

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                +A   +  M  + C +P + VY+ ++    +A +L + +E+  KMV+RG+
Sbjct: 658 AHKVKDARDLLETMFVDGC-EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY 711



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 187/439 (42%), Gaps = 46/439 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           + FF W   +  + H+P +Y  ++++  +     +   F+  ++  + E+     ++L+R
Sbjct: 155 VKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIR 214

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ------------- 238
           +  R GL   A+    R++++G  P ++ ++ ++ +  R  +   AQ             
Sbjct: 215 KCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSM 274

Query: 239 -----SFFDSL---------------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
                 FF                  K+ F P+ I+Y  ++ G C A    EA      M
Sbjct: 275 DEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 279 KMAGIQPNVYTYSIVIDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           +     PNV TY I+   LC C    Q+ R   + + M+  GC P+   FN+L+  + K+
Sbjct: 335 RSTSCIPNVQTYRIL---LCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL------EDAIKVLNSMVRKGCN 389
                  ++  +M++  C+   + YN LI   C  G+L      E A K  N M+  G  
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N        RC+   G    A+++  +M      P+T TY+ ++     +   +    L
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEM+   V P+V TY ILI  +   G    A+ ++ EM+ + C +P    Y  ++    
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC-EPTVVTYTTLIHAYL 570

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +A ++    EL E M+ +G
Sbjct: 571 KAKKVSVANELFELMIAKG 589



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 36/282 (12%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  + D A      M  R     V T+S L+ R  +       +   ++M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E  CAP+ + ++ +I  L +  +  EA      +++K  +P+V+ YT ++ G+ +AG +
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV------------ 316
            +   +FREM   G  PN  TY+++I+  C  G +  A+ +  EM +             
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 317 ---------------------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQM--KRLGC 353
                                G  P  + +  L+   VKA R E  L+++ ++    +  
Sbjct: 862 IEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSM 921

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            A    Y  LI       K++ A ++   M+R G  P+  TF
Sbjct: 922 TAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTF 963


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 197/463 (42%), Gaps = 67/463 (14%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           +L  L FF  +     F H+P  Y  MI   G  R  D   + + LMK   +    D F 
Sbjct: 53  ILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFV 112

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAP------------------------------D 217
           I++  Y RAGLA +A+  F R+ E+GC P                              D
Sbjct: 113 IVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRD 172

Query: 218 KI-----AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
            I      +++++  LC+  R   A+     +  K   PD + YT +V   CR G + EA
Sbjct: 173 GIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA 232

Query: 272 E------------------------------RVFREMKMAGIQPNVYTYSIVIDALCRCG 301
                                           +F EM + GI P+V TYS VI+ L   G
Sbjct: 233 RELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A  V A+M   GC PN  TF +LM+ +    R  + L ++N+M + G E +T+ YN
Sbjct: 293 NVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYN 352

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C  GK+ +A+ V   M R G  PN +T++ +    +K GD+ GA  ++ KM   
Sbjct: 353 TLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C PN V Y  ++ +   +   +  L L + M      PN  T+   I   C  G    A
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            K + +M +  C  P  + Y  VL  L  A + ++  ++V ++
Sbjct: 473 MKVLNQMRQYGC-APNVTTYNEVLDGLFNAKRTREALQIVGEI 514



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 179/381 (46%), Gaps = 1/381 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +IN   +  + +  +   + M    ++  V T+S ++      G    A+    +M
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
              GC+P+   F+ ++       R  EA   ++ + ++  EP+ + Y  L+ G C  G +
Sbjct: 305 FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  V ++M+  G+ PN  TYS +ID   + G +  A +++ +M+  GC PN + +  +
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCM 424

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + V  + S     L +   M    C  +TIT+N  I   C  GK E A+KVLN M + GC
Sbjct: 425 VDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGC 484

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN +T+N +   +        A ++ G++++++ + N VTYN ++  F  +      L+
Sbjct: 485 APNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQ 544

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +  ++     +P+  TY  +I  YC  G    A + +  + ++    P    Y  +L  +
Sbjct: 545 IAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGV 604

Query: 509 RRAGQLQKHEELVEKMVDRGF 529
                + +    ++KM++ G 
Sbjct: 605 CNWIGVDEAVVHLDKMINEGI 625



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 8/294 (2%)

Query: 237 AQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           A  FF S+   + F+   + YT +++      +I   + + + MK+ GI  N   + IVI
Sbjct: 56  ALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVI 115

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +A  R G   +A   F  + E GC+P+   +N+++   +  ++ + +  +YN MKR G E
Sbjct: 116 NAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIE 175

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            +  TYN L+   CK+ +++ A K+L  M  KGC P+A ++  +   + +LG V  A  +
Sbjct: 176 LNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL 235

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             ++K          YN L+  F      + V +L  EM    ++P+V TY  +I     
Sbjct: 236 SMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSE 290

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           MG+   A   + +M    C  P    +  +++     G+L +  +L  +M+  G
Sbjct: 291 MGNVEMALAVLAKMFLRGC-SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEG 343



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 38/266 (14%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S L+  + +AG    A   +N+M   GC P+ + ++ ++ +LCR    + A    +++
Sbjct: 385 TYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENM 444

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +    P+ I +   ++G C +G    A +V  +M+  G  PNV TY+ V+D L    + 
Sbjct: 445 ANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRT 504

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +  E+ E+  + N +T+N ++     A   +  LQ+  ++   G + D+ITYN +
Sbjct: 505 REALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTV 564

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG----------------CN------------------ 389
           I  +CK G+++ AI++++ + +KG                CN                  
Sbjct: 565 IYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEG 624

Query: 390 --PNASTFNMIFRCI-SKLGDVNGAH 412
             PN +T+N + R + SKLG +   H
Sbjct: 625 ICPNRATWNALVRGLFSKLGHLGPIH 650



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 3/162 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+++     ++   A   +  ++   ++  + T++ ++  +  AG+   A+    ++ 
Sbjct: 491 YNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLL 550

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNI 268
             G  PD I ++ VI   C++     A    D L  K E  PDV  YT+L+ G C    +
Sbjct: 551 VGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGV 610

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDAL-CRCGQITRAHDV 309
            EA     +M   GI PN  T++ ++  L  + G +   H V
Sbjct: 611 DEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIV 652


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 213/432 (49%), Gaps = 37/432 (8%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +S+FN +     FV   + ++ ++        F+  W F +  KS+ V + V +F IL++
Sbjct: 114 ISYFNEMVDNG-FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIK 171

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEP 250
               AG   ++      + E+G +P+ + ++ +I   C+K    +A+  FF+  K     
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   YT L+ G  + G   +   ++ +M+  G+ PN+YTY+ V++ LC+ G+   A  VF
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM E G   N +T+N L+    +  +  +  +V +QMK  G   + ITYN LID  C  
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           GKL  A+ +   +  +G +P+  T+N++     + GD +GA +M  +M++   +P+ VTY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
            IL+  FA S + +  ++L+  MEE  + P+V+TY +LI  +C  G  N A +  + M+E
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471

Query: 491 EKC----------------------------------LKPGSSVYEMVLQQLRRAGQLQK 516
           + C                                  L P  + Y  +++ L +  + ++
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531

Query: 517 HEELVEKMVDRG 528
            E LVEKM+D G
Sbjct: 532 AERLVEKMIDSG 543



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 188/373 (50%), Gaps = 4/373 (1%)

Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F+ +    EF  SP+  +Y  +I+   K  + + A      M    +     T+++L+  
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
             + G+  +    + +M+E G  P+   ++ V++ LC+  R  +A   FD ++++    +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           ++ Y  L+ G CR   ++EA +V  +MK  GI PN+ TY+ +ID  C  G++ +A  +  
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           ++   G  P+ +T+N L+    +   T    ++  +M+  G +   +TY  LID   +  
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            +E AI++  SM   G  P+  T++++       G +N A R++  M +  CEPN V YN
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            ++  +    S+   LKL KEMEE E+ PNV +YR +I + C       A + + +MI+ 
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542

Query: 492 KCLKPGSSVYEMV 504
             + P +S+  ++
Sbjct: 543 G-IDPSTSILSLI 554



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 197/388 (50%), Gaps = 5/388 (1%)

Query: 144 FVHSPDLYHEMINLAGKVR-QFDLAWHFID-LMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           F H+  L  ++I  +GK+  QF  +   +  L +S   +     + +++  YV++     
Sbjct: 55  FSHAQSLLLQVI--SGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNL 112

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           ++  FN M + G  P    F+ +++ +      ++  SFF+  K K   DV  +  L++G
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C AG I ++  +  E+   G  PNV  Y+ +ID  C+ G+I +A D+F EM ++G   N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  L+    K    ++  ++Y +M+  G   +  TYN +++  CKDG+ +DA +V +
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M  +G + N  T+N +   + +   +N A+++  +MK     PN +TYN L+  F    
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                L L ++++   + P++ TY IL++ +C  G  + A K ++EM EE+ +KP    Y
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EERGIKPSKVTY 411

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++    R+  ++K  +L   M + G 
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGL 439



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 131/247 (53%), Gaps = 3/247 (1%)

Query: 157 LAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           + G  R+  L  A   +D MKS  +   + T++ L+  +   G   +A+     ++  G 
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAER 273
           +P  + ++I++S  CRK   S A      ++++  +P  + YT L+  + R+ N+ +A +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +   M+  G+ P+V+TYS++I   C  GQ+  A  +F  M+E  CEPN + +N ++  + 
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           K   + + L++  +M+      +  +Y ++I+  CK+ K ++A +++  M+  G +P+ S
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549

Query: 394 TFNMIFR 400
             ++I R
Sbjct: 550 ILSLISR 556


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 190/385 (49%), Gaps = 4/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ ++    +  Q   A   ++ M S  V     TF+ L++ +V  G    A+  
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
             RM E GC+P K+  +++I+  C+  R  +A  +    + + FEPD I Y   V G C+
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++  A +V   M   G  P+V+TY+IV++ LC+ GQ+  A  +  +M+E GC P+  T
Sbjct: 303 NGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+      +R E+ L +  Q+   G   D  T+N LI+  CK G  + A+++   M 
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK 422

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+  T+N +   +  LG +  A  +  +M+   C  +TVTYN ++         +
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIE 482

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              ++  +M+   +  N  T+  LI   C     ++A + I +MI E  L+P +  Y  +
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG-LQPNNITYNSI 541

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           L    + G ++K  ++++ M   GF
Sbjct: 542 LTHYCKQGDIKKAADILQTMTANGF 566



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 192/401 (47%), Gaps = 5/401 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           L   N   AR +F   P++Y E+I  L       DL    +  M+    ++ V      +
Sbjct: 61  LRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGVVHSFL 120

Query: 191 RRYVRAGLAAEAVH-AFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
             Y R  L  +AV    N+++  +G   D + ++ ++++L    +    ++ +  + ++ 
Sbjct: 121 ESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERG 180

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            +PDV+ +  L++  CRA  +  A  +  EM  +G+ P+  T++ ++      G I  A 
Sbjct: 181 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAAL 240

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            V A MLE+GC P  +T N L+  + K  R E  L    Q    G E D ITYN  ++  
Sbjct: 241 RVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGL 300

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C++G +  A+KV++ MV++G +P+  T+N++  C+ K G +  A  +  +M +  C P+ 
Sbjct: 301 CQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDI 360

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            T+N L+    +    +  L L +++    + P+V T+ ILI   C +G    A +   E
Sbjct: 361 TTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEE 420

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           M    C  P    Y  ++  L   G+L K  +L+++M   G
Sbjct: 421 MKSSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 2/376 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN   K+ + + A  +I    +   E    T++  V    + G    A+   + M + G
Sbjct: 261 LINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEG 320

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAE 272
             PD   ++IV++ LC+  +  EA+   + + ++   PD+  +  L+   C    + EA 
Sbjct: 321 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEAL 380

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + R++ + G+ P+VYT++I+I+ALC+ G    A  +F EM   GC P+ +T+N L+   
Sbjct: 381 DLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNL 440

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
               +  K L +  +M+  GC   T+TYN +ID  CK  ++E+A +V + M  +G + NA
Sbjct: 441 CSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 500

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TFN +   + K   ++ A+++  +M     +PN +TYN ++  +           + + 
Sbjct: 501 ITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQT 560

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  N  E +V TY  LI   C  G    A K +R M   K ++     Y  V+Q L R  
Sbjct: 561 MTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM-RIKGMRATPKAYNPVIQSLFRRN 619

Query: 513 QLQKHEELVEKMVDRG 528
             +    L  +M + G
Sbjct: 620 NTRDAMNLFREMTEVG 635



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 151/311 (48%), Gaps = 2/311 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TF+IL+    + G    A+  F  M+  GC PD++ ++ +I  LC   +  +A     
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454

Query: 243 SLKDKFEP-DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            ++    P   + Y  ++ G C+   I EAE VF +M + GI  N  T++ +ID LC+  
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +I  A+ + ++M+  G +PN+IT+N+++  + K    +K   +   M   G E D +TY 
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+  CK G+ + A+K+L  M  KG       +N + + + +  +   A  ++ +M ++
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634

Query: 422 KCEPNTVTYNILMQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              P+  TY I+ + +     S         EM +    P  +++R+L      +G  + 
Sbjct: 635 GEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDY 694

Query: 481 AYKYIREMIEE 491
             + I  +IE+
Sbjct: 695 FIRAIEIIIEK 705


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 190/381 (49%), Gaps = 5/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K   F  A + +D M+++     + T+++++    R G   +A    NR+ 
Sbjct: 190 YTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLS 249

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
            YG  PD ++++ V+  LC  RR  + +  F  + DK   P+ + +  LVR +CR G + 
Sbjct: 250 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 309

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +V ++M   G  PN    +IVI+A+C+ G++  A+D    M   GC P++I++  ++
Sbjct: 310 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 369

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           R   +A R E   ++  +M R  C  + +T+N  I   C+ G +E AIK++  M   GC+
Sbjct: 370 RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCS 429

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
               T+N +       G V+ A  ++    +L CEPNT+TY  L+     ++  D   +L
Sbjct: 430 VGIVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTITYTTLLTGLCHAERLDAAAEL 486

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM + +   N  T+ +L++ +C  G    A + + +M+E  C  P    +  +L  + 
Sbjct: 487 LAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC-TPNLITFNTLLDGIT 545

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           +    ++  EL+  +V +G +
Sbjct: 546 KDCNSEEALELLHGLVSKGVS 566



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 181/359 (50%), Gaps = 7/359 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R  + +V T+++L+    ++    EA++  + M   GC P+ + ++++I+ +CR+ R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+   + L    F+PD++ YT +++G C A    + + +F EM      PN  T+ +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++   CR G + RA  V  +M + GC PN+   N ++    K  R +      N M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C  DTI+Y  ++   C+ G+ E A ++L  MVRK C PN  TFN     + + G +  A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           ++   M +  C    VTYN L+  F      D  L+L   +     EPN  TY  L+T  
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGL 474

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           C     + A + + EMI++ C  P ++V + +++    + G +++  ELV +M++ G T
Sbjct: 475 CHAERLDAAAELLAEMIQKDC--PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 190/412 (46%), Gaps = 35/412 (8%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L    R  D+   F +++  + V   V TF +LVR + R G+   A+    +M ++GC 
Sbjct: 266 GLCAARRWDDVKVLFAEMVDKKCVPNEV-TFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 324

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+    +IVI+ +C++ R  +A  F +++      PD I YT ++RG CRAG    A+ +
Sbjct: 325 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 384

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC---------------- 318
             EM      PN  T++  I  LC+ G I +A  +   M E GC                
Sbjct: 385 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 444

Query: 319 ----------------EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
                           EPN+IT+  L+     A R +   ++  +M +  C  + +T+N 
Sbjct: 445 QGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNV 504

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+   C+ G +E+A++++N M+  GC PN  TFN +   I+K  +   A  +   +    
Sbjct: 505 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 564

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
              +T+TY+ ++ + +    T+  +++   +++  + P V  Y  ++   C     + A 
Sbjct: 565 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 624

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            +   M+   C+ P  S Y ++++ L   G L++   ++ ++  +G  ++ L
Sbjct: 625 DFFAYMVSNGCM-PNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSL 675



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 156/329 (47%), Gaps = 7/329 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L + +IN   K  + D A+ F++ M          +++ ++R   RAG    A      M
Sbjct: 329 LCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 388

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
               C P+++ F+  I ILC+K    +A    + + +      ++ Y  LV G+C  G +
Sbjct: 389 VRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV 448

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  +F  +     +PN  TY+ ++  LC   ++  A ++ AEM++  C  N++TFN L
Sbjct: 449 DSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVL 505

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +    E+ +++ NQM   GC  + IT+N L+D   KD   E+A+++L+ +V KG 
Sbjct: 506 VSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGV 565

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           + +  T++ +   +S+      A +M   ++D+   P    YN ++        TD  + 
Sbjct: 566 SLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAID 625

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGH 477
               M  N   PN +TY ILI    G+ H
Sbjct: 626 FFAYMVSNGCMPNESTYIILIE---GLAH 651



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           ++M+++GC P+  T+ ++   + K      A  +  +M+   C PN VTYN+++      
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D   ++   +     +P++ +Y  ++   C    W++      EM+++KC+ P    
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV-PNEVT 294

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++M+++   R G +++  +++++M   G T
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCT 324


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 192/384 (50%), Gaps = 18/384 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y E+I       + + A+     MK   V   V T++IL+  + +AG+  +A 
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
           +  + M   GC P  + ++ +I    + ++ S A   F+ +  K   P+VI YT L+ G+
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 263 CRAGNISEAERVFREMKM----------------AGIQPNVYTYSIVIDALCRCGQITRA 306
           C++GNI +A +++  M+                    +PNV TY  ++D LC+  ++  A
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            D+   M   GCEPN+I ++ L+    KA++ ++  +V+++M   G   +  TY+ LID 
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDR 724

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             KD +L+  +KVL+ M+   C PN   +  +   +SK+   + A+++   M++  C+PN
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VTY  ++  F  +   D  L+L +EM      PN  TY +LI   C  GH + AY  + 
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLE 844

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRR 510
           EM +    K  SS Y  V++  +R
Sbjct: 845 EMKQTYWPKHVSS-YCKVIEGYKR 867



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 18/349 (5%)

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
           G   +A    + M   G  PD   +S VI  LC   R   A   F  +K     PDV  Y
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
           T L+  + +AG I +A     EM   G +P V TY+ +I A  +  +++ A+++F  M+ 
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK----------------RLGCEADTIT 359
            GC PN IT+  L+  + K+   EK  Q+Y +M+                 +  + + +T
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y  L+D  CK  K++DA  +L +M   GC PN   ++ +     K   ++ A  ++ KM 
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +    PN  TY+ L+      K  D+VLK+  +M EN   PN+  Y  +I     +   +
Sbjct: 708 EHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            AYK +  M+EEK  KP    Y  ++    +AG++ K  EL  +M  +G
Sbjct: 768 EAYKLML-MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 181/415 (43%), Gaps = 30/415 (7%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           + +FV +  LY++MI+   +   F+ A  F++ M+S +    V T+ IL+   +      
Sbjct: 301 KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLG 360

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
                 + M   GC P    F+ ++   C+    S A      + K + +P  +VY  L+
Sbjct: 361 RCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILI 420

Query: 260 RGWCRAGNISE------AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
              C  G +        AE+ + EM  AG   N          LC  G+  +A+ V  EM
Sbjct: 421 GSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM 480

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           +  G  P++ T++ ++     ASR E    ++ +MK  G   D  TY  LIDC  K G +
Sbjct: 481 MGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGII 540

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A   L+ MVR GC P   T+  +     K   V+ A+ ++  M    C PN +TY  L
Sbjct: 541 KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTAL 600

Query: 434 MQMFATSKS-------------------TDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  +  S +                    DM  K+K  + E   +PNV TY  L+   C 
Sbjct: 601 IDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE---KPNVVTYGALVDGLCK 657

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                +A   +  M  + C +P + VY+ ++    +A +L + +E+  KMV+ G+
Sbjct: 658 AHKVKDARDLLETMFVDGC-EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 187/439 (42%), Gaps = 46/439 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           + FF W   +  + H+P +Y  ++++  +     +   F+  ++  + E+     ++L+R
Sbjct: 155 VKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIR 214

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ------------- 238
           +  R GL   A+    R++++G  P ++ ++ ++ +  R  +   AQ             
Sbjct: 215 KCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSM 274

Query: 239 -----SFFDSL---------------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
                 FF                  K+ F P+ I+Y  ++ G C A    EA      M
Sbjct: 275 DEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 279 KMAGIQPNVYTYSIVIDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           +     PNV TY I+   LC C    Q+ R   + + M+  GC P+   FN+L+  + K+
Sbjct: 335 RSTSCIPNVQTYRIL---LCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL------EDAIKVLNSMVRKGCN 389
                  ++  +M++  C+   + YN LI   C  G+L      E A K  N M+  G  
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N        RC+   G    A+++  +M      P+T TY+ ++     +   +    L
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEM+   V P+V TY ILI  +   G    A+ ++ EM+ + C +P    Y  ++    
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC-EPTVVTYTTLIHAYL 570

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +A ++    EL E M+ +G
Sbjct: 571 KAKKVSVANELFELMIAKG 589



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 116/282 (41%), Gaps = 36/282 (12%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  + D A      M        V T+S L+ R  +       +   ++M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E  CAP+ + ++ +I  L +  +  EA      +++K  +P+V+ YT ++ G+ +AG +
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV------------ 316
            +   +FREM   G  PN  TY+++I+  C  G +  A+ +  EM +             
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 317 ---------------------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQM--KRLGC 353
                                G  P  + +  L+   VKA R E  L+++ ++    +  
Sbjct: 862 IEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSM 921

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            A    Y  LI       K+  A ++   M+R G  P+  TF
Sbjct: 922 AAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTF 963


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 180/362 (49%), Gaps = 4/362 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M      I  D +  +V+   +AG+ A+A+  F  M+   C P  + ++++I+  C    
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 234 ASEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
             +A   F S+K   + EPD   Y  L+ G C +GN   A ++  EM+   I  NV+TYS
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I +L +  +   ++ V  EM+  GC P+   FN +M+   +++  EK  +VY  M   
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--GCNPNASTFNMIFRCISKLGDVN 409
           G + D ++Y+ LI    K GKL++++K+L+ M  +  G  PN  TF+ +   + + G++ 
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++G M +  C+PN  TY  L+     ++      +L ++M +  + P+   Y  LI
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             YC  G  + A K  REM     L+P    +  ++    + G+L +  ELV +M  +G 
Sbjct: 301 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 360

Query: 530 TA 531
            A
Sbjct: 361 AA 362



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 179/370 (48%), Gaps = 5/370 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  M+ +N+   V T+S +++  V+     E+      M   GC PD  AF+ V+ 
Sbjct: 100 ARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQ 159

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM--AGI 283
              R     +A+  +  + +  ++PD + Y  L+ G  + G + E+ ++  EM M  AG 
Sbjct: 160 GFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGY 219

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            PNV T+S +I  LCR G++ +A +VF  MLE GC+PN  T+  L+    +A +  +  +
Sbjct: 220 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARE 279

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCNPNASTFNMIFRCI 402
           ++ +M +     D + YN LI  +CK G +++A K+   M    G  P   TFN +    
Sbjct: 280 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            KLG +  A+ +  +M       +T TY IL+   + +   D  L++ K+M E +   + 
Sbjct: 340 CKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 399

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            +    +   C  G+ + AY  + E   +    P    + ++ + L + G+++  ++L+E
Sbjct: 400 VSCVSFVGGLCKTGNIDQAYA-VFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458

Query: 523 KMVDRGFTAR 532
               R  TA+
Sbjct: 459 PAKARDITAQ 468



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 192/391 (49%), Gaps = 6/391 (1%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           D Y  ++    K      A    + MKS +   ++ T+++L+     AG   +A+  F  
Sbjct: 11  DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70

Query: 209 ME-EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAG 266
           M+ E    PD+  ++ +IS LC       A+     ++DK    +V  Y+++++   +  
Sbjct: 71  MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              E+ +V  EM  AG  P+V+ ++ V+    R   + +A +V+  M+E G +P++++++
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 190

Query: 327 NLMRVHVKASRTEKVLQVYNQ--MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            L+    K  + ++ L++ ++  M+  G   + IT++ LI   C+ G+LE A++V  SM+
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC PN  T+  +   + +   V  A  ++ KM      P+ V YN L+  +    S D
Sbjct: 251 EAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 310

Query: 445 MVLKLKKEMEENE-VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              KL +EM     ++P + T+  LI  +C +G    A + + EM   K L   +  Y +
Sbjct: 311 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM-GTKGLAADTCTYRI 369

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           ++  L RA +L +  E+ ++M ++ F   P+
Sbjct: 370 LIAGLSRATKLDEALEVYKQMREKKFLLDPV 400



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 147/278 (52%), Gaps = 6/278 (2%)

Query: 143 EFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT--VDTFSILVRRYVRAGL 198
           E  + PD   YH +I+   K+ + D +   +  M  R       V TFS L+    R G 
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTN 257
             +A+  F  M E GC P+K  ++ +I+ LCR  +  +A+  F+ +      PD + Y +
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298

Query: 258 LVRGWCRAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           L+ G+C+ G++ EAE+++REM   AG+QP + T++ +ID  C+ G++ RA+++ AEM   
Sbjct: 299 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G   ++ T+  L+    +A++ ++ L+VY QM+      D ++    +   CK G ++ A
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 418

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
             V  +  + G  PN  TF ++   + KLG V  A ++
Sbjct: 419 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 456


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L     ++  P+ V    +   + + +GK+++   A   +D    R     V T++IL
Sbjct: 194 KALEVLERMSVAPDVVTYNTILRSLCD-SGKLKE---AMEVLDRQLQRECYPDVITYTIL 249

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KF 248
           +          +A+   + M + GC PD + ++++I+ +C++ R  EA  F +++     
Sbjct: 250 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 309

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +P+VI +  ++R  C  G   +AER+  +M   G  P+V T++I+I+ LCR   + RA D
Sbjct: 310 KPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAID 369

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  +M + GC PNS+++N L+    +  + ++ ++    M   GC  D +TYN L+   C
Sbjct: 370 VLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 429

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           KDGK++ A+++LN +  KGC+P   T+N +   ++K+G    A  +  +M+    +P+ +
Sbjct: 430 KDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDII 489

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY+ L++        D  +K+  +ME   ++P+  TY  ++   C     + A  ++  M
Sbjct: 490 TYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 549

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           +E+ C KP  + Y ++++ +   G  ++  EL+ ++  RGF  +
Sbjct: 550 VEKGC-KPTEATYTILIEGIADEGLAEEALELLNELCSRGFVKK 592



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 177/343 (51%), Gaps = 5/343 (1%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           +I +R+ VR G   E +    RM   G  PD IA + +I   CR  +  +A    + L++
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 247 KFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               PDVI Y  L+ G+C++G I +A  V   M +A   P+V TY+ ++ +LC  G++  
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKE 226

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A +V    L+  C P+ IT+  L+      S   + +++ ++M++ GC+ D +TYN LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK+G+L++AIK LN+M   GC PN  T N+I R +   G    A R+   M    C P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + VT+NIL+      +     + + ++M ++   PN  +Y  L+  +C     + A +Y+
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             M+   C  P    Y  +L  L + G++    E++ ++  +G
Sbjct: 407 EIMVSRGCY-PDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 171/341 (50%), Gaps = 3/341 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+R + R+G   +A      +E  G  PD I ++++I   C+     +A    + +    
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS--V 204

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDV+ Y  ++R  C +G + EA  V          P+V TY+I+I+A C    + +A  
Sbjct: 205 APDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK 264

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM + GC+P+ +T+N L+    K  R ++ ++  N M   GC+ + IT+N ++   C
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC 324

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G+  DA ++L+ M+RKGC+P+  TFN++   + +   +  A  +  KM    C PN++
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSL 384

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           +YN L+  F   K  D  ++  + M      P++ TY  L+T  C  G  + A + + ++
Sbjct: 385 SYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQL 444

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             + C  P    Y  V+  L + G+ +   EL+E+M  +G 
Sbjct: 445 SSKGC-SPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGL 484



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 9/253 (3%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVH------SPDL--YHEMINLAGKVRQFDLAWHFIDL 173
           + H I L  + S   W+ A            SP +  ++ +IN   + R    A   ++ 
Sbjct: 314 ITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK 373

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M          +++ L+  + +      A+     M   GC PD + ++ +++ LC+  +
Sbjct: 374 MPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 433

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A    + L  K   P +I Y  ++ G  + G    A  +  EM+  G++P++ TYS 
Sbjct: 434 VDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYST 493

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++  L R G++  A  +F +M  +  +P+++T+N +M    KA +T + +     M   G
Sbjct: 494 LLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 553

Query: 353 CEADTITYNFLID 365
           C+    TY  LI+
Sbjct: 554 CKPTEATYTILIE 566


>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
 gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
 gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
          Length = 632

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 194/396 (48%), Gaps = 7/396 (1%)

Query: 134 FFNWVTARPE----FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           FF W  A       F H+   Y +M+++ GK RQF      I  M  +   + +D F I 
Sbjct: 203 FFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQEM-GKEGALCMDAFKIA 261

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           ++ +  AG    AV  F  M  +G      +F+ ++  L ++    EA   FD ++D++ 
Sbjct: 262 IKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYA 321

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD+  YT L+  WC A N+ EA RV+ EM   G++P+V  ++ +I+ L R  +   A  +
Sbjct: 322 PDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKM 381

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M   G  PN  T+  L+R H K  + +  ++ + +M+ +GC+ D  TY  L+  +  
Sbjct: 382 FELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGN 441

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +++    +L  M +KGC P+  T+N + + ++     + A R+Y KM     EP   T
Sbjct: 442 AKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHT 501

Query: 430 YNILMQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           YN++M+  F   ++  M   + +EM    + P+VN+Y + I  +   G    A KYI EM
Sbjct: 502 YNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEM 561

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           I +K +K     Y        +AG+     EL +K+
Sbjct: 562 I-QKGMKTPQIDYNKFAADFSKAGKPDILYELAQKV 596



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 2/204 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K  + D+A    + M+    +  V T++ L+  Y  A            M 
Sbjct: 397 YTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMT 456

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG-NI 268
           + GC PD   ++ +I +L  +    +A   +  + K   EP +  Y  +++ +   G N 
Sbjct: 457 QKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNY 516

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
                V+ EM   GI P+V +Y++ I+   R G+   A     EM++ G +   I +N  
Sbjct: 517 MMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKF 576

Query: 329 MRVHVKASRTEKVLQVYNQMKRLG 352
                KA + + + ++  ++K  G
Sbjct: 577 AADFSKAGKPDILYELAQKVKFTG 600


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 211/452 (46%), Gaps = 48/452 (10%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYH--EMINLAGKVRQFDLAW 168
           T   +I+  C V+    L Q L F   + ++      PD+Y    +I+      +   A 
Sbjct: 13  TYTSLIQGLCKVKR---LEQALIFLGKMVSKG---FHPDVYTYTAVIHALCVENRLHEAR 66

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
            F++ M +RN+   V T+++L+    + G   EAV   ++M +  C P  + ++ +IS L
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125

Query: 229 CRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C+  RASEA    + +      PD+  YT L+ G+C++    +A RVF ++   G +P+V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNL------------------ 328
            TYS +ID LC+ G++  A D+F  M++ G C PN++T+N+L                  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 329 -----------------MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
                            M    K +R +    + NQM R G   D +T+  L+D  C++ 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           +L DA+ +L  M RK C+P   T+N I     +   +  A +    ++++ C PN V++N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFN 363

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           I+++       +   ++L +E       P+V  Y  +I   C     + A +  R+M+EE
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
               P S  Y  ++  L  AG L +    +EK
Sbjct: 424 PGCLPNSITYSTLITGLCNAGMLDRARGYIEK 455



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 190/392 (48%), Gaps = 10/392 (2%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R + V +   Y+ +I+   K  +   A+  ++ M        + T++ L+  + ++  + 
Sbjct: 108 RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNL 258
           +A+  F ++   G  PD + +S +I  LC++ R  EA   F  +       P+ + Y +L
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+CR G + EA  +   M   G  P+V TY+ +++  C+  ++  A+D+  +M   G 
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+ +TF +LM    + +R    + +  +M+R  C     TYN ++D +C+  +LE+A K
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            +  +    C PN  +FN++ R + K+   + A  +  + +  +C P+ V Y  ++    
Sbjct: 348 FM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405

Query: 439 TSKSTDMVLKL-KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             K  D   ++ +K +EE    PN  TY  LIT  C  G  + A  YI     EK   P 
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI-----EKGCVPN 460

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              Y +++   R+A + +   EL++ MV RGF
Sbjct: 461 IGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 173/344 (50%), Gaps = 4/344 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L++   +     +A+    +M   G  PD   ++ VI  LC + R  EA+ F + +
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++   P+V+ YT L+ G C+ G + EA  +  +M+   + P   TY+ +I  LC+  + 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A+D+  EM+  GC P+  T+  L+    K+ +++  L+V+ Q+   G   D +TY+ L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           ID  CK+G+L++AI +   M++ G C PN  T+N +     ++G ++ A  +  +M +  
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ VTY  LM  F      D    L  +M    + P+V T+  L+   C     ++A 
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
             + EM  + C  P    Y  +L    RA QL++  + + + +D
Sbjct: 312 HILGEMRRKSC-SPTVYTYNTILDGYCRANQLEEARKFMLEEMD 354



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 38/310 (12%)

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV----------------- 293
           D + YT+L++G C+   + +A     +M   G  P+VYTY+ V                 
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 294 ------------------IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
                             ID LC+ G++  A  + ++M +  C P ++T+N+L+    KA
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKA 128

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R  +   +  +M   GC  D  TY  LI   CK  K +DA++V   +V +G  P+  T+
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 396 NMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           + +   + K G +  A  ++G+M K   C PNTVTYN L+  F      D  + L + M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           E    P+V TY  L+  +C +   ++AY  + +M   K L P    +  ++  L R  +L
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT-RKGLTPDVVTFTSLMDGLCRENRL 307

Query: 515 QKHEELVEKM 524
                ++ +M
Sbjct: 308 SDAVHILGEM 317



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 2/211 (0%)

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
           C  + +T+ +L++   K  R E+ L    +M   G   D  TY  +I   C + +L +A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K L  M  +   PN  T+ ++   + K G V+ A  +  KM+  KC P  VTYN L+   
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             ++       L +EM  +   P++ TY  LIT +C     ++A +   +++  +  +P 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV-ARGFRPD 184

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              Y  ++  L + G+L++  +L  +M+  G
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 4/181 (2%)

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C AD +TY  LI   CK  +LE A+  L  MV KG +P+  T+  +   +     ++ A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +   +M +    PN VTY +L+         D  + L  +M +  V P   TY  LI+  
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           C     + AY  + EM+   C+ P    Y  ++    ++ +      + E++V RGF  R
Sbjct: 126 CKAERASEAYDLLEEMVYSGCI-PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF--R 182

Query: 533 P 533
           P
Sbjct: 183 P 183


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 210/404 (51%), Gaps = 6/404 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L     ++  P+ V    +   + + +GK+++   A   +D    R     V T++IL
Sbjct: 195 KALQVLERMSVAPDVVTYNTILRSLCD-SGKLKE---AMEVLDRQMQRECYPDVITYTIL 250

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKF 248
           +          +A+   + M + GC PD + ++++I+ +C++ R  EA  F +++     
Sbjct: 251 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGC 310

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +P+VI +  ++R  C  G   +AER+  +M   G  P+V T++I+I+ LCR   + RA D
Sbjct: 311 QPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAID 370

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  +M + GC PNS+++N L+    +  + ++ ++    M   GC  D +TYN L+   C
Sbjct: 371 VLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 430

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           KDGK + A+++LN +  KGC+P   T+N +   ++K+G    A  +  +M+    +P+ +
Sbjct: 431 KDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDII 490

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY+ L++        D  +K+  +ME   ++P+  TY  ++   C     + A  ++  M
Sbjct: 491 TYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 550

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           +E+ C KP  + Y ++++ +   G  ++  EL+ ++  RGF  +
Sbjct: 551 VEKGC-KPTKATYTILIEGIADEGLAEEALELLNELCSRGFVKK 593



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 177/343 (51%), Gaps = 5/343 (1%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           +I +R+ VR G   E +    RM   G  PD IA + +I   CR  +  +A    + L++
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 247 KFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               PDVI Y  L+ G+C++G I +A +V   M +A   P+V TY+ ++ +LC  G++  
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKE 227

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A +V    ++  C P+ IT+  L+      S   + +++ ++M++ GC+ D +TYN LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK+G+L++AIK LN+M   GC PN  T N+I R +   G    A R+   M    C P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + VT+NIL+      +     + + ++M ++   PN  +Y  L+  +C     + A +Y+
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             M+   C  P    Y  +L  L + G+     E++ ++  +G
Sbjct: 408 EIMVSRGCY-PDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 193/403 (47%), Gaps = 8/403 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEM---INLAGKVRQFDL--AWHFIDLMKSRNVEITVDTF 186
           L+     ++ P  V+    + E    I+L   VR  +L     F++ M  +     V   
Sbjct: 86  LNGIGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIAC 145

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+R + R+G   +A      +E  G  PD I ++++I   C+     +A    + +  
Sbjct: 146 TSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS- 204

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PDV+ Y  ++R  C +G + EA  V          P+V TY+I+I+A C    + +A
Sbjct: 205 -VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQA 263

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +  EM + GC+P+ +T+N L+    K  R ++ ++  N M   GC+ + IT+N ++  
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRS 323

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C  G+  DA ++L  M+RKGC+P+  TFN++   + +   +  A  +  KM    C PN
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           +++YN L+  F   K  D  ++  + M      P++ TY  L+T  C  G  + A + + 
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++  + C  P    Y  V+  L + G+ +   EL+E+M  +G 
Sbjct: 444 QLSSKGC-SPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGL 485


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 183/376 (48%), Gaps = 2/376 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++   GK R  +     +  M+S  +   + TF+I +R   RAG   EA     RM+
Sbjct: 230 YSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD 289

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD + ++++I  LC   + + A+  F  +K    +PD + Y  L+  +   G++ 
Sbjct: 290 DAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLD 349

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             +  + EM+  G  P+V T++I+IDALC+ G++  A      M + G  PN  T+N L+
Sbjct: 350 AIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLI 409

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              ++ +R ++ L+++N M+ LG E    TY   ID + K G+   AIK    M   G  
Sbjct: 410 CGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIV 469

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN    N     +++ G +  A   +  +K     P+ +TYNILM+ +  +   D  +KL
Sbjct: 470 PNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKL 529

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EMEEN  +P V     LI         + A+K  + M E K L P    Y  +L  L 
Sbjct: 530 LSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMK-LAPTVVTYNTLLAGLG 588

Query: 510 RAGQLQKHEELVEKMV 525
           + G++Q+   L + M+
Sbjct: 589 KEGRVQEATALFKGMI 604



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 166/339 (48%), Gaps = 2/339 (0%)

Query: 170  FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            F+ L KS  +  +++ ++ L+   ++A L   A   F +M+  GC PD   +++ +  L 
Sbjct: 775  FLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALG 834

Query: 230  RKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            +  +  E    ++  L    +P+ I +  ++ G  ++ ++ +A  ++ ++      P  +
Sbjct: 835  KSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPW 894

Query: 289  TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            TY  +ID L + G++  A   F EML+ GC PN   +N LM    K    E   +++ +M
Sbjct: 895  TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954

Query: 349  KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             + G   D  +Y+ ++DC C  GK++DA+     +   G +P+   +N++   + +   V
Sbjct: 955  VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRV 1014

Query: 409  NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
              A  ++ +M++    P+  TYN L+     +   +   K+ +E++   +EPNV TY  L
Sbjct: 1015 EEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNAL 1074

Query: 469  ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            I  +   G+ + AY   ++M+   C +P +  +  +  Q
Sbjct: 1075 IRGHSMSGNPDRAYAVYKKMMVGGC-RPNTGTFAQLPNQ 1112



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 157/309 (50%), Gaps = 4/309 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +P+L  Y+ +I    ++ + D A    + M+S  +E T  T+ + +  Y ++G + +A+ 
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
            F +M+  G  P+ +A +  +  L  + R  EA+ FF+ LK     PD I Y  L+R + 
Sbjct: 459 TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG + +A ++  EM+  G  P V   + +ID L +  ++  A  +F  M E+   P  +
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+    K  R ++   ++  M    C  +TI++N L+DC CK+G+++ A+K+L  M
Sbjct: 579 TYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRM 638

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
               C P+  T+N +   + K   VN A  ++ +MK +   P+ VT   L+         
Sbjct: 639 TEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRI 697

Query: 444 DMVLKLKKE 452
           +   ++ KE
Sbjct: 698 EDAFRVAKE 706



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/437 (21%), Positives = 200/437 (45%), Gaps = 41/437 (9%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF-SI 188
           Q  SFFN V   P  +H+ +  + ++ +    R+ +      +LM+ + ++ +++T+ +I
Sbjct: 104 QAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTI 163

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDK 247
               Y+R GL  EA  A  +M + G   +  ++  +I +L +     EA   +  +  + 
Sbjct: 164 FKVLYIRGGLR-EAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEG 222

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            +P +  Y+ L+    +  +I     + +EM+  G++PN+YT++I I  L R G+I  A+
Sbjct: 223 IKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAY 282

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASR------------------------------ 337
            +   M + GC P+ +T+  L+     A +                              
Sbjct: 283 GILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKF 342

Query: 338 -----TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
                 + + + +++M+  G   D +T+  LID  CK GK+++A   L+ M ++G  PN 
Sbjct: 343 SDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNL 402

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N +   + +L  ++ A  ++  M+ L  E    TY + +  +  S  +   +K  ++
Sbjct: 403 HTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEK 462

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRA 511
           M+ N + PN+      +      G    A ++   +  +KC L P +  Y ++++   +A
Sbjct: 463 MKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL--KKCGLAPDAITYNILMRCYGKA 520

Query: 512 GQLQKHEELVEKMVDRG 528
           G++    +L+ +M + G
Sbjct: 521 GRVDDAIKLLSEMEENG 537



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/534 (22%), Positives = 211/534 (39%), Gaps = 114/534 (21%)

Query: 106  SISPSTVRHVIEKSCGVRHG--IPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ 163
             ++P  + + I   C  + G     +++LS        PE V    + + +I+   K  +
Sbjct: 502  GLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVV----IINSLIDTLYKADR 557

Query: 164  FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
             D AW     MK   +  TV T++ L+    + G   EA   F  M    C P+ I+F+ 
Sbjct: 558  VDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNT 617

Query: 224  VISILC-----------------------------------RKRRASEAQSFFDSLKDKF 248
            ++  LC                                   ++ R + A   F  +K   
Sbjct: 618  LLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVI 677

Query: 249  EPDVIVYTNLVRGWCRAGNISEAERV---------------FREMKMAGI-------QPN 286
             PD +    L+ G  + G I +A RV               F E  M GI       Q  
Sbjct: 678  YPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSI 737

Query: 287  VYTYSIV--------------IDALCRCGQITRAHDVFAEMLEVGC-EPNSITFNNLMRV 331
            ++  S+V              +  LC+ G+   A++VF ++ +  C  P+   +N+L+  
Sbjct: 738  LFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDG 797

Query: 332  HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             +KA  TE    ++ +MK  GC  D  TYN  +D   K GK+++   +   M+ +GC PN
Sbjct: 798  LLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPN 857

Query: 392  ASTFNM-IFRCIS----------------------------------KLGDVNGAHRMYG 416
              T N+ IF  +                                   KLG +  A + + 
Sbjct: 858  TITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFE 917

Query: 417  KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            +M D  C PN   YNILM  F      +   +L + M +  + P++ +Y I++   C +G
Sbjct: 918  EMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVG 977

Query: 477  HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              ++A  Y  E+ +   L P    Y +++  L R+ ++++   L ++M +RG T
Sbjct: 978  KVDDALHYFEEL-KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGIT 1030



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 155/325 (47%), Gaps = 3/325 (0%)

Query: 144  FVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
            F  +P L  Y+ +I+   K R  ++AW     MK+      V T+++ +    ++G   E
Sbjct: 782  FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841

Query: 202  AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVR 260
                +  M   GC P+ I  +IVI  L +     +A   ++D +   F P    Y  L+ 
Sbjct: 842  LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901

Query: 261  GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
            G  + G + EA++ F EM   G  PN   Y+I+++   + G +  A ++F  M++ G  P
Sbjct: 902  GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961

Query: 321  NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
            +  +++ ++       + +  L  + ++K  G + D + YN +I+   +  ++E+A+ + 
Sbjct: 962  DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021

Query: 381  NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
            + M  +G  P+  T+N +   +   G V  A +MY +++    EPN  TYN L++  + S
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMS 1081

Query: 441  KSTDMVLKLKKEMEENEVEPNVNTY 465
             + D    + K+M      PN  T+
Sbjct: 1082 GNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 1/219 (0%)

Query: 143  EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
            +F  +P  Y  +I+   K+ + + A  F + M           ++IL+  + + G    A
Sbjct: 888  DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETA 947

Query: 203  VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRG 261
               F RM + G  PD  ++SI++  LC   +  +A  +F+ LK    +PD++ Y  ++ G
Sbjct: 948  CELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMING 1007

Query: 262  WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
              R+  + EA  +F EM+  GI P++YTY+ +I  L   G +  A  ++ E+   G EPN
Sbjct: 1008 LGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPN 1067

Query: 322  SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
              T+N L+R H  +   ++   VY +M   GC  +T T+
Sbjct: 1068 VFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 1/180 (0%)

Query: 150  LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            LY+ ++N  GK    + A      M    +   + ++SI+V      G   +A+H F  +
Sbjct: 930  LYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL 989

Query: 210  EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            +  G  PD + ++++I+ L R +R  EA S FD ++++   PD+  Y  L+     AG +
Sbjct: 990  KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMV 1049

Query: 269  SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             EA +++ E+++ G++PNV+TY+ +I      G   RA+ V+ +M+  GC PN+ TF  L
Sbjct: 1050 EEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 192/412 (46%), Gaps = 38/412 (9%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L  K +  D A    D +       ++ T++ +++   + G    A+    +MEE GC 
Sbjct: 150 GLCSKAKIID-AVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCK 208

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDK---------------------------- 247
           PD +A++ VI  LC+ RRA+EA  FF  + D+                            
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268

Query: 248 --------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
                     P+ + +T LV G C+ G I EA RVF  M   G++P+ YTYS ++D  C 
Sbjct: 269 FKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCL 328

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             Q+  A  +F  M+  G  P+   +N L+  H K+ R  +   + ++M       DT+T
Sbjct: 329 QSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVT 388

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y+ L+   C+ G+ + A K+   M   G  P++ T++++   + K G ++ A R+   M+
Sbjct: 389 YSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQ 448

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           + K EP+   YNIL+Q        +   +L   +    ++P+V TY ++I+     G  N
Sbjct: 449 ESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSN 508

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            A +  R+M+   CL P S  Y + +Q   R G       L+E+MV RGF+A
Sbjct: 509 EACEMFRKMVVNGCL-PNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSA 559



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 179/364 (49%), Gaps = 2/364 (0%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
            A+  +  M    ++ T  TF  L+          +AV  F+ + + G AP  I ++ +I
Sbjct: 124 FAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTII 183

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
             LC+    + A      +++K  +PDV+ Y  ++   C+    +EA   F EM   GI 
Sbjct: 184 KGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIP 243

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV TYS ++   C  GQ+  A  +F +M+     PN++TF  L+    K     +  +V
Sbjct: 244 PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRV 303

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +  M   G E D  TY+ L+D +C   ++++A K+ + MV KG  P+   +N++     K
Sbjct: 304 FEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCK 363

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
              +N A  +  +M D    P+TVTY+ LMQ F  +    +  KL KEM    + P+  T
Sbjct: 364 SRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSIT 423

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y IL+   C  GH + A++ ++ M E K ++P   +Y +++Q +   G+L+   EL   +
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESK-IEPHICIYNILIQGMCNFGKLEAARELFSNL 482

Query: 525 VDRG 528
             +G
Sbjct: 483 FVKG 486



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 157/331 (47%), Gaps = 5/331 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P  V    + H   NL     Q + A      M  RNV     TF+ILV    + G+  E
Sbjct: 244 PNVVTYSSILHGFCNLG----QLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILE 299

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
           A   F  M E G  PD   +S ++   C + +  EAQ  FD +  K F P V VY  L+ 
Sbjct: 300 ARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILIN 359

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C++  ++EA+ +  EM    + P+  TYS ++   C+ G+   A  +F EM   G  P
Sbjct: 360 GHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLP 419

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +SIT++ L+    K    ++  ++   M+    E     YN LI   C  GKLE A ++ 
Sbjct: 420 DSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELF 479

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           +++  KG  P+  T+ ++   + K G  N A  M+ KM    C PN+ TYN+ +Q F  +
Sbjct: 480 SNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRN 539

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
                 ++L +EM       + +T+++L+ +
Sbjct: 540 GDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 6/351 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V  F+ L+   V+    +  +    +M+     P+    +I+I+ LC   R       F 
Sbjct: 69  VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR-DHVHFAFS 127

Query: 243 SLKDKF----EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           +L   F    +P  + +  L+ G C    I +A ++F E+   G  P++ TY+ +I  LC
Sbjct: 128 ALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLC 187

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           + G  T A  +  +M E GC+P+ + +N ++    K  R  + +  +++M   G   + +
Sbjct: 188 KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVV 247

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY+ ++   C  G+L +A  +   M+ +   PN  TF ++   + K G +  A R++  M
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
            +   EP+  TY+ LM  +      D   KL   M      P+V  Y ILI  +C     
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           N A   + EM +   L P +  Y  ++Q   +AG+ Q  ++L ++M   G 
Sbjct: 368 NEAKTLLSEMYDRD-LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGL 417



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 143/298 (47%), Gaps = 3/298 (1%)

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           A    SF   L  +  P V+V+  L+    +  + S    + ++M ++ I+PNVYT +I+
Sbjct: 51  ADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTIL 110

Query: 294 IDALCRCGQ--ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           I+ LC   +  +  A     +M ++G +P  +TF  L+      ++    +++++++ ++
Sbjct: 111 INCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKM 170

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G     ITY  +I   CK G   +A+++L  M  KGC P+   +N +   + K    N A
Sbjct: 171 GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEA 230

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              + +M D    PN VTY+ ++  F      +    L K+M    V PN  T+ IL+  
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            C  G    A + + EM+ E  ++P +  Y  ++       Q+ + ++L + MV +GF
Sbjct: 291 LCKEGMILEA-RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 1/228 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S  +Y+ +IN   K R+ + A   +  M  R++     T+S L++ + +AG    A 
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQ 406

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
             F  M  YG  PD I +SI++  LC+     EA     ++++ K EP + +Y  L++G 
Sbjct: 407 KLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGM 466

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G +  A  +F  + + GIQP+V TY+++I  L + G    A ++F +M+  GC PNS
Sbjct: 467 CNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNS 526

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            T+N  ++  ++       +++  +M   G  AD+ T+  L+D    D
Sbjct: 527 CTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESND 574


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 208/445 (46%), Gaps = 38/445 (8%)

Query: 121  GVRHGIPLLQVLSFFNWVTARPEFVH-------------------------------SPD 149
            GVR+G      L FF+W T++  + H                               SP+
Sbjct: 820  GVRNGDA---ALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPN 876

Query: 150  LYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
            ++   I + G  R  D+  A+  +  M    V   V   +++++    A     A+  F 
Sbjct: 877  MFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFK 936

Query: 208  RMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
             MEE G C PD   +S ++  L +  +  +A    + +  K   P+V+ Y++L+ G C+A
Sbjct: 937  EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKA 996

Query: 266  GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
            G + EA  + + M  +G  PN+ TY+ +ID  C+ G+I  A+ +  EM++ GC+PN +T+
Sbjct: 997  GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056

Query: 326  NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
              L+    K  + E  + +   M   G   +  TYN L+D  CK  ++E A ++L+SM++
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116

Query: 386  KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            KGC PN  ++N +   + K   V+    +  +M    C P+ VT+N ++     +   D+
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176

Query: 446  VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              +L   ++E+   PN+ TY  L+   C    ++ A   +REM  ++   P    Y  V+
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236

Query: 506  QQLRRAGQLQKHEELVEKMVDRGFT 530
              L ++ ++ +  +L  +M+  G  
Sbjct: 1237 DGLCKSKRVDRAYKLFLQMLSDGLA 1261



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 185/379 (48%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MIN   K  + D A   ++ M        V +++ ++  + +A     A+    +M 
Sbjct: 233 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 292

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             GC PD ++++ VI+ LC+  +  EA    D +  +  +P+VI Y  LV G+CR G++ 
Sbjct: 293 TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 352

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  + R+M   G +PN  TY+ ++   CR   + RAH V   M++ GC P++I ++ ++
Sbjct: 353 GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTII 412

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA +  +   +  QM R GC  D    + LID  CK   ++ A ++L   +   C 
Sbjct: 413 SGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCA 472

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   ++++   + K   +  A      M   +C P+ VTYN ++     S+  +    L
Sbjct: 473 PDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLL 532

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    V P+V TY I+I  +C   + ++A+K +  M E KC+ P    Y  ++  L 
Sbjct: 533 FDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV-PDVVTYSALINGLC 591

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +AG + K  ++ ++M+  G
Sbjct: 592 KAGTVDKAFDVFQEMLGCG 610



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 186/384 (48%), Gaps = 4/384 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +IN   K+ Q D A   +D M  R  +  V T+  LV  + R G    AV  
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
             +M E G  P+ I ++ ++ + CR+     A      + +    PD I Y+ ++ G+C+
Sbjct: 358 VRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCK 417

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG + EA  +  +M   G +P+V   S +IDALC+   I  A ++    + + C P+ + 
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA 477

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    KA R  +     + M +  C  D +TYN ++D  CK  ++ DA  + + M 
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T++++     K  +++ A +M  +MK+ KC P+ VTY+ L+     + + D
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               + +EM      PN+ TY  LI   C +     A + +  M ++ C  P S  Y  +
Sbjct: 598 KAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC-TPDSITYTCL 656

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           +  L  A +L++   ++ +M D+G
Sbjct: 657 INGLCNASRLEEAWRVLREMKDKG 680



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 169/313 (53%), Gaps = 7/313 (2%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME-EYGCAP 216
           AGK+R+   A   ++ M  R     V   S L+    +A  A ++     RM     CAP
Sbjct: 418 AGKLRE---AHDLLEQMIRRGCRPDVACLSTLIDALCKAA-AIDSAQELLRMSIGMDCAP 473

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D +A+SI+I  LC+ +R  EA+S+ D + K++  PDV+ Y ++V G C++  I++A  +F
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLF 533

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M+ AG+ P+V TYSIVI + C+   +  A  +   M E  C P+ +T++ L+    KA
Sbjct: 534 DRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKA 593

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +K   V+ +M   GC  + +TYN LID  CK  K+E A ++L  M ++ C P++ T+
Sbjct: 594 GTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITY 653

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             +   +     +  A R+  +MKD  C P+ +TY  L++    + + ++V +L KEME 
Sbjct: 654 TCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713

Query: 456 N-EVEPNVNTYRI 467
             E + N N  R+
Sbjct: 714 TEEGQWNANGARL 726



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 191/422 (45%), Gaps = 13/422 (3%)

Query: 107 ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           +SP  V  V+++       I     L FF W   R  + H     + ++N+  K  Q+  
Sbjct: 91  LSPEIVGKVLQRL------IDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQ 144

Query: 167 AWHFIDLMKSR---NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           A    DL +SR          T+S L+  ++RAG    A   F+ M   G          
Sbjct: 145 AH---DLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKS 201

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           ++  LC   + S+A   F  +     PD + Y  ++ G  ++  + +A R+  EM   G 
Sbjct: 202 ILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF 261

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            PNV++Y+ V+   C+  ++  A  +  +M+  GC P+ +++  ++    K  + ++  +
Sbjct: 262 APNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACR 321

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           V ++M + GC+ + ITY  L+D  C+ G L+ A++++  M  +G  PNA T+N I     
Sbjct: 322 VMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFC 381

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           +  D+  AH++   M    C P+ + Y+ ++  F  +        L ++M      P+V 
Sbjct: 382 RRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVA 441

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
               LI   C     ++A + +R  I   C  P    Y +++  L +A +L + E  ++ 
Sbjct: 442 CLSTLIDALCKAAAIDSAQELLRMSIGMDC-APDVVAYSILIHALCKAKRLPEAESWLDV 500

Query: 524 MV 525
           MV
Sbjct: 501 MV 502



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 167/328 (50%), Gaps = 4/328 (1%)

Query: 146  HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            + P+L  Y+ ++++  K  + + A   +  M  +     V +++ ++    +A    E V
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143

Query: 204  HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                +M    C PD + F+ +I  +C+  R   A   F+ +++    P+++ Y +LV G 
Sbjct: 1144 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 1203

Query: 263  CRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C++    +AE + REM +  G  P++ TY+ VID LC+  ++ RA+ +F +ML  G  P+
Sbjct: 1204 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 1263

Query: 322  SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             +T++ ++    K    ++   V   M + G +   ITY  LID  CK G L+ A+++L 
Sbjct: 1264 DVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 1323

Query: 382  SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
             ++ KG  P+  TF++    +SK G +  A  +   M      P+TVTYN L++ F  + 
Sbjct: 1324 LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDAS 1383

Query: 442  STDMVLKLKKEMEENEVEPNVNTYRILI 469
             T+  + L + M +   EP+  TY  L+
Sbjct: 1384 LTEDAVDLFEVMRQCGCEPDNATYTTLV 1411



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 196/409 (47%), Gaps = 45/409 (11%)

Query: 147  SPDL--YHEMINLAGKVRQFDLAWHFI-DLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            +P+L  Y+ +++   K R+FD A + + ++ + +     + T++ ++    ++     A 
Sbjct: 1190 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 1249

Query: 204  HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGW 262
              F +M   G APD + +SIVIS LC+ R   EA +  +  LK+ F+P  I Y  L+ G+
Sbjct: 1250 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 1309

Query: 263  CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            C+ GN+ +A  + + +   G  P+V T+SI ID L + G++ +A ++   ML  G  P++
Sbjct: 1310 CKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDT 1369

Query: 323  ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD------------ 370
            +T+N L++    AS TE  + ++  M++ GCE D  TY  L+  H  D            
Sbjct: 1370 VTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVG-HLVDKKSYKDLLAEVS 1428

Query: 371  ---------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
                            KLE +I+V  + VR GC    +  +M  +C    G    A +++
Sbjct: 1429 KSMVDTGFKLNHELSSKLEASIEV-EADVRLGC----AIVDMFGKC----GSPQDARKVF 1479

Query: 416  GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
              M     + N V ++ ++ ++   K  +    L + M    VEP+  T+  L+TM C  
Sbjct: 1480 EGMD----QRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHA 1535

Query: 476  GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            G  + A      +  +  L+PG   +  V+  L R G + + E+L+  M
Sbjct: 1536 GLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGM 1584



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 19/338 (5%)

Query: 170  FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
             ++ M S N    + TF+ ++    +      A   FN ++E GC P+ + ++ ++  LC
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 1204

Query: 230  RKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            + RR  +A+     +  K    PD+I Y  ++ G C++  +  A ++F +M   G+ P+ 
Sbjct: 1205 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 1264

Query: 288  YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             TYSIVI +LC+   +  A++V   ML+ G +P +IT+  L+    K    +K L++   
Sbjct: 1265 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 1324

Query: 348  MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
            +   G   D +T++  ID   K G+L  A ++L +M+R G  P+  T+N + +       
Sbjct: 1325 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASL 1384

Query: 408  VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS-TDMVLKLKKEMEEN---------- 456
               A  ++  M+   CEP+  TY  L+      KS  D++ ++ K M +           
Sbjct: 1385 TEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSS 1444

Query: 457  ------EVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
                  EVE +V     ++ M+   G   +A K    M
Sbjct: 1445 KLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGM 1482



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 187/423 (44%), Gaps = 41/423 (9%)

Query: 147  SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            SP++  Y+ +I+   K+ + D A+H ++ M     +  V T+++L+  + + G A +A+ 
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074

Query: 205  AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
                M E G  P+   ++ ++ + C+K     A     S+  K   P+V+ Y  ++ G C
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134

Query: 264  RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN-- 321
            +A  + E   +  +M      P++ T++ +IDA+C+  ++  A+++F  + E GC PN  
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194

Query: 322  ----------------------------------SITFNNLMRVHVKASRTEKVLQVYNQ 347
                                               IT+N ++    K+ R ++  +++ Q
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 1254

Query: 348  MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
            M   G   D +TY+ +I   CK   +++A  VL  M++ G +P A T+  +     K G+
Sbjct: 1255 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 1314

Query: 408  VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            ++ A  +   +      P+ VT++I +   +         +L + M    + P+  TY  
Sbjct: 1315 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 1374

Query: 468  LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK-HEELVEKMVD 526
            L+  +C      +A      M +  C +P ++ Y  ++  L      +    E+ + MVD
Sbjct: 1375 LLKGFCDASLTEDAVDLFEVMRQCGC-EPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVD 1433

Query: 527  RGF 529
             GF
Sbjct: 1434 TGF 1436



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 124/252 (49%), Gaps = 4/252 (1%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G Q  ++  + +++ L +  Q ++AHD+F   +E     +++T++ L+   ++A +    
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            +++++M R G +A    +  ++   C  G+  DA+     M  K C P++ T+N +   
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMING 239

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +SK   ++ A R+  +M D    PN  +YN ++  F  +   +  L L ++M      P+
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V +Y  +I   C +   + A + + +MI+  C +P    Y  ++    R G L    ELV
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGC-QPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 522 EKMVDRGFTARP 533
            KM +RG+  RP
Sbjct: 359 RKMTERGY--RP 368



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/382 (21%), Positives = 151/382 (39%), Gaps = 69/382 (18%)

Query: 147  SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            +PD   Y  +I+   K R  D A + ++LM     +    T+  L+  + + G   +A+ 
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 1320

Query: 205  AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
                +   G  PD + FSI I  L ++ R  +A    ++ L+    PD + Y  L++G+C
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380

Query: 264  RAGNISEAERVFREMKMAGIQPNVYTYSI------------------------------- 292
             A    +A  +F  M+  G +P+  TY+                                
Sbjct: 1381 DASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNH 1440

Query: 293  ---------------------VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
                                 ++D   +CG    A  VF  M +     N + ++ ++ V
Sbjct: 1441 ELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQ----RNVVLWSAMLGV 1496

Query: 332  HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-GCNP 390
            +V   + E+   ++  M   G E D +T+  L+   C  G L+ A+    S+ R  G  P
Sbjct: 1497 YVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEP 1556

Query: 391  NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
                F+ +   + +LG VN A  +   M  + C+P+  T+N L+  +      +  L++ 
Sbjct: 1557 GVDHFSCVIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALRVA 1613

Query: 451  KEMEENEVEPNVNTYRILITMY 472
                  E+ P   +Y +L  MY
Sbjct: 1614 ------ELNPTQASYLLLSNMY 1629


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 188/385 (48%), Gaps = 4/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ ++    +  Q   A   ++ M SR V     TF+ L++ +V  G    A+  
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
             RM E GC+  K+  +++I+  C+  R  +A  +    + D FEPD I Y   V G C+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             ++  A +V   M   G  P+V+TY+IV++ LC+ GQ+  A  +  +M++ GC P+  T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+      +R E+ L +  Q+   G   D  T+N LI+  CK G    A+++   M 
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+  T+N +   +  LG +  A  +   M+   C  +T+TYN ++         +
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              ++  +M+   +  N  T+  LI   C     ++A++ I +MI E  L+P +  Y  +
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG-LQPNNITYNSI 537

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           L    + G ++K  +++E M   GF
Sbjct: 538 LTHYCKQGDIKKAADILETMTANGF 562



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 3/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D+M     +  V T++I+V    + G   EA    N+M + GC PD   F+ +I+
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   R  EA      +  K   PDV  +  L+   C+ G+   A R+F EMK +G  P
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+ +ID LC  G++ +A D+  +M   GC  ++IT+N ++    K  R E+  +V+
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM   G   + IT+N LID  CKD K++DA +++N M+ +G  PN  T+N I     K 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A  +   M     E + VTY  L+     +  T + LK+ + M    + P    Y
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKM 524
             ++       +  +A    REM  E    P +  Y++V + L R  G +++  + + +M
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREM-AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663

Query: 525 VDRGF 529
           VD+GF
Sbjct: 664 VDKGF 668



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 188/400 (47%), Gaps = 4/400 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L   N   AR +F   P++Y E+I   G V   DL    +  M+    ++ +      + 
Sbjct: 58  LRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLD 117

Query: 192 RYVRAGLAAEAVH-AFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
            Y    L  +AV    N+++  +G   D + ++ ++++L    +    +S +  +  +  
Sbjct: 118 SYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGI 177

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV+ +  L++  CRA  +  A  +  EM   G+ P+  T++ ++      G I  A  
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V A MLE+GC    +T N L+  + K  R E  L    Q    G E D ITYN  ++  C
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++  +  A+KV++ MV++G +P+  T+N++  C+ K G +  A  +  +M D  C P+  
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+N L+    T    +  L L +++    V P+V T+ ILI   C +G  + A +   EM
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               C  P    Y  ++  L   G+L K  +L++ M   G
Sbjct: 418 KNSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 211/452 (46%), Gaps = 48/452 (10%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYH--EMINLAGKVRQFDLAW 168
           T   +I+  C V+    L Q L F   + ++      PD+Y    +I+      +   A 
Sbjct: 13  TYTSLIQGLCKVKR---LEQALIFLGKMVSKG---FHPDVYTYTAVIHALCVENRLHEAR 66

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
            F++ M +RN+   V T+++L+    + G   EAV   ++M +  C P  + ++ +IS L
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125

Query: 229 CRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C+  RASEA    + +      PD+  YT L+ G+C++    +A RVF ++   G +P+V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNL------------------ 328
            TYS +ID LC+ G++  A D+F  M++ G C PN++T+N+L                  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 329 -----------------MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
                            M    K +R +    + NQM R G   D +T+  L+D  C++ 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           +L DA+ +L  M RK C+P   T+N I     +   +  A +    ++++ C PN V++N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFN 363

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           I+++       +   ++L +E       P+V  Y  +I   C     + A +  R+M+EE
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
               P S  Y  ++  L  AG L +    +EK
Sbjct: 424 PGCLPNSITYSTLVTGLCNAGMLDRARGYIEK 455



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 190/392 (48%), Gaps = 10/392 (2%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R + V +   Y+ +I+   K  +   A+  ++ M        + T++ L+  + ++  + 
Sbjct: 108 RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNL 258
           +A+  F ++   G  PD + +S +I  LC++ R  EA   F  +       P+ + Y +L
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+CR G + EA  +   M   G  P+V TY+ +++  C+  ++  A+D+  +M   G 
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+ +TF +LM    + +R    + +  +M+R  C     TYN ++D +C+  +LE+A K
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            +  +    C PN  +FN++ R + K+   + A  +  + +  +C P+ V Y  ++    
Sbjct: 348 FM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405

Query: 439 TSKSTDMVLKL-KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             K  D   ++ +K +EE    PN  TY  L+T  C  G  + A  YI     EK   P 
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI-----EKGCVPN 460

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              Y +++   R+A + +   EL++ MV RGF
Sbjct: 461 IGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 173/344 (50%), Gaps = 4/344 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L++   +     +A+    +M   G  PD   ++ VI  LC + R  EA+ F + +
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++   P+V+ YT L+ G C+ G + EA  +  +M+   + P   TY+ +I  LC+  + 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A+D+  EM+  GC P+  T+  L+    K+ +++  L+V+ Q+   G   D +TY+ L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           ID  CK+G+L++AI +   M++ G C PN  T+N +     ++G ++ A  +  +M +  
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ VTY  LM  F      D    L  +M    + P+V T+  L+   C     ++A 
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
             + EM  + C  P    Y  +L    RA QL++  + + + +D
Sbjct: 312 HILGEMRRKSC-SPTVYTYNTILDGYCRANQLEEARKFMLEEMD 354



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 38/310 (12%)

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV----------------- 293
           D + YT+L++G C+   + +A     +M   G  P+VYTY+ V                 
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 294 ------------------IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
                             ID LC+ G++  A  + ++M +  C P ++T+N+L+    KA
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKA 128

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R  +   +  +M   GC  D  TY  LI   CK  K +DA++V   +V +G  P+  T+
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 396 NMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           + +   + K G +  A  ++G+M K   C PNTVTYN L+  F      D  + L + M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           E    P+V TY  L+  +C +   ++AY  + +M   K L P    +  ++  L R  +L
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT-RKGLTPDVVTFTSLMDGLCRENRL 307

Query: 515 QKHEELVEKM 524
                ++ +M
Sbjct: 308 SDAVHILGEM 317



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 2/211 (0%)

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
           C  + +T+ +L++   K  R E+ L    +M   G   D  TY  +I   C + +L +A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K L  M  +   PN  T+ ++   + K G V+ A  +  KM+  KC P  VTYN L+   
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             ++       L +EM  +   P++ TY  LIT +C     ++A +   +++  +  +P 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV-ARGFRPD 184

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              Y  ++  L + G+L++  +L  +M+  G
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 4/181 (2%)

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C AD +TY  LI   CK  +LE A+  L  MV KG +P+  T+  +   +     ++ A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +   +M +    PN VTY +L+         D  + L  +M +  V P   TY  LI+  
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           C     + AY  + EM+   C+ P    Y  ++    ++ +      + E++V RGF  R
Sbjct: 126 CKAERASEAYDLLEEMVYSGCI-PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF--R 182

Query: 533 P 533
           P
Sbjct: 183 P 183


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 188/368 (51%), Gaps = 2/368 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q  LA   +  M     E    T   LV  + R    ++AV   ++M E G  PD +A++
Sbjct: 135 QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYN 194

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC+ RR ++A  FF  +  K   P+V+ YT LV G C +G  ++A R+ R+M   
Sbjct: 195 AIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKR 254

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            I PNV TYS ++DA  + G++  A ++F EM+ +  +P+ +T+++L+       R ++ 
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            Q+++ M   GC  D ++YN LI+  CK  ++ED +K+   M ++G   N  T+N + + 
Sbjct: 315 NQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQG 374

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             ++GDV+ A   + +M      P+  TYNIL+     +   +  L + ++M+++E++ +
Sbjct: 375 FFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLD 434

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           + TY  +I   C  G   +A+     +   K LKP    Y  ++  L   G   + E L 
Sbjct: 435 IVTYTTVIQGMCKTGKVEDAWGLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLQHEVEALY 493

Query: 522 EKMVDRGF 529
            KM   G 
Sbjct: 494 TKMKQEGL 501



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 140/291 (48%), Gaps = 1/291 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + +K +  P ++ +  L+    +         + ++M++ GI+ ++YT++IVI+  C 
Sbjct: 73  FREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C Q++ A  V  +ML++G EP+ +T  +L+    + +R    + + ++M  +G   D + 
Sbjct: 133 CFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVA 192

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN +ID  CK  ++ DA+     + RKG  PN  T+  +   +   G  N A R+   M 
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K  PN +TY+ L+  F  +       ++ +EM    ++P++ TY  LI   C     +
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            A +    M+ + C  P    Y  ++    +A +++   +L  KM  RG  
Sbjct: 313 EANQMFDLMVSKGCF-PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 112/220 (50%), Gaps = 1/220 (0%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A ++F EM++    P+ + FN L+   VK  + + V+ +  +M+ LG   D  T+N +I+
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           C C   ++  A+ VL  M++ G  P+  T   +     +   V+ A  +  KM ++   P
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + V YN ++     ++  +  L   KE+    + PNV TY  L+   C  G WN+A + +
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           R+MI+ K + P    Y  +L    + G++ + +E+ E+MV
Sbjct: 249 RDMIKRK-ITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 188/385 (48%), Gaps = 4/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ ++    +  Q   A   ++ M SR V     TF+ L++ +V  G    A+  
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
             RM E GC+  K+  +++I+  C+  R  +A  +    + D FEPD I Y   V G C+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             ++  A +V   M   G  P+V+TY+IV++ LC+ GQ+  A  +  +M++ GC P+  T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+      +R E+ L +  Q+   G   D  T+N LI+  CK G    A+++   M 
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+  T+N +   +  LG +  A  +   M+   C  +T+TYN ++         +
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              ++  +M+   +  N  T+  LI   C     ++A++ I +MI E  L+P +  Y  +
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG-LQPNNITYNSI 537

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           L    + G ++K  +++E M   GF
Sbjct: 538 LTHYCKQGDIKKAADILETMTANGF 562



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 3/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D+M     +  V T++I+V    + G   EA    N+M + GC PD   F+ +I+
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   R  EA      +  K   PDV  +  L+   C+ G+   A R+F EMK +G  P
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+ +ID LC  G++ +A D+  +M   GC  ++IT+N ++    K  R E+  +V+
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM   G   + IT+N LID  CKD K++DA +++N M+ +G  PN  T+N I     K 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A  +   M     E + VTY  L+     +  T + LK+ + M    + P    Y
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKM 524
             ++       +  +A    REM  E    P +  Y++V + L R  G +++  + + +M
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREM-AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663

Query: 525 VDRGF 529
           VD+GF
Sbjct: 664 VDKGF 668



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 188/400 (47%), Gaps = 4/400 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L   N   AR +F   P++Y E+I   G V   DL    +  M+    ++ +      + 
Sbjct: 58  LRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLD 117

Query: 192 RYVRAGLAAEAVH-AFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
            Y    L  +AV    N+++  +G   D + ++ ++++L    +    +S +  +  +  
Sbjct: 118 SYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGI 177

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV+ +  L++  CRA  +  A  +  EM   G+ P+  T++ ++      G I  A  
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V A MLE+GC    +T N L+  + K  R E  L    Q    G E D ITYN  ++  C
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++  +  A+KV++ MV++G +P+  T+N++  C+ K G +  A  +  +M D  C P+  
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+N L+    T    +  L L +++    V P+V T+ ILI   C +G  + A +   EM
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               C  P    Y  ++  L   G+L K  +L++ M   G
Sbjct: 418 KNSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 188/385 (48%), Gaps = 4/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ ++    +  Q   A   ++ M SR V     TF+ L++ +V  G    A+  
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
             RM E GC+  K+  +++I+  C+  R  +A  +    + D FEPD I Y   V G C+
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             ++  A +V   M   G  P+V+TY+IV++ LC+ GQ+  A  +  +M++ GC P+  T
Sbjct: 207 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 266

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+      +R E+ L +  Q+   G   D  T+N LI+  CK G    A+++   M 
Sbjct: 267 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 326

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+  T+N +   +  LG +  A  +   M+   C  +T+TYN ++         +
Sbjct: 327 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              ++  +M+   +  N  T+  LI   C     ++A++ I +MI E  L+P +  Y  +
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG-LQPNNITYNSI 445

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           L    + G ++K  +++E M   GF
Sbjct: 446 LTHYCKQGDIKKAADILETMTANGF 470



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 3/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D+M     +  V T++I+V    + G   EA    N+M + GC PD   F+ +I+
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   R  EA      +  K   PDV  +  L+   C+ G+   A R+F EMK +G  P
Sbjct: 273 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+ +ID LC  G++ +A D+  +M   GC  ++IT+N ++    K  R E+  +V+
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM   G   + IT+N LID  CKD K++DA +++N M+ +G  PN  T+N I     K 
Sbjct: 393 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 452

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A  +   M     E + VTY  L+     +  T + LK+ + M    + P    Y
Sbjct: 453 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 512

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKM 524
             ++       +  +A    REM E     P +  Y++V + L R  G +++  + + +M
Sbjct: 513 NPVLQSLFRRNNIRDALSLFREMAEVG-EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 571

Query: 525 VDRGF 529
           VD+GF
Sbjct: 572 VDKGF 576



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 2/318 (0%)

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISE 270
           +G   D + ++ ++++L    +    +S +  +  +  +PDV+ +  L++  CRA  +  
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A  +  EM   G+ P+  T++ ++      G I  A  V A MLE+GC    +T N L+ 
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            + K  R E  L    Q    G E D ITYN  ++  C++  +  A+KV++ MV++G +P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +  T+N++  C+ K G +  A  +  +M D  C P+  T+N L+    T    +  L L 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           +++    V P+V T+ ILI   C +G  + A +   EM    C  P    Y  ++  L  
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNTLIDNLCS 346

Query: 511 AGQLQKHEELVEKMVDRG 528
            G+L K  +L++ M   G
Sbjct: 347 LGKLGKALDLLKDMESTG 364


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 200/439 (45%), Gaps = 42/439 (9%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--- 184
           L + + FF+W T +P + HS    + +++   + ++   A+   DL K+    +      
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAY---DLFKNHRCGLCSPDSI 168

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S L+  + +A    +A    + ME+ G  P    ++ +I  LC   R   A   +  +
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 228

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           +    P VI YT LV   C++  IS+A  +  +M  AG  PNV TY+ +I+  C+ G + 
Sbjct: 229 QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +F +MLE  C P+  T+N L+  + K  R +   ++  +M + GCE + ITYN L+
Sbjct: 289 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D   K GK  DA  +   M+R+ C P+  TFN++     K+G ++ A+ ++  M D  C 
Sbjct: 349 DSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCL 408

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY-- 482
           P+  TYNI++     +   D   +L + M E    P+V TY  +++  C     + AY  
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468

Query: 483 ---------------------------------KYIREMIEEKCLKPGSSVYEMVLQQLR 509
                                            K +REM E     P    Y +++    
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM-ERNGSAPDVVAYTILIHGFC 527

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +A QL K      +M+D+G
Sbjct: 528 KADQLDKSLAFFSEMLDKG 546



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 192/412 (46%), Gaps = 9/412 (2%)

Query: 123 RHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT 182
           + G  LLQ +  +      P F+    L   ++     +  F+LA     +M  R+ + +
Sbjct: 323 QDGAKLLQEMVKYG---CEPNFITYNTLMDSLVKSGKYIDAFNLA----QMMLRRDCKPS 375

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
             TF++++  + + G    A   F  M + GC PD   ++I+IS  CR  R  +A+   +
Sbjct: 376 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 435

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            + +    PDV+ Y ++V G C+A  + EA  V+  ++  G   +V T S +ID LC+  
Sbjct: 436 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 495

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A  +  EM   G  P+ + +  L+    KA + +K L  +++M   GC    ITY+
Sbjct: 496 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 555

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +ID  CK  ++ D   +L +M+ +G  P+A  +  +   + K    + A+ +Y  MK  
Sbjct: 556 IVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQT 615

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C P  VTYN+L+         D  + L + ME +   P+  TY  +   +      + A
Sbjct: 616 GCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKA 675

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           ++  + M    C  P   +Y ++L +L    ++ +  E+ E+ ++ G    P
Sbjct: 676 FRLFQAMKSRGC-SPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDP 726



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 168/351 (47%), Gaps = 38/351 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ MI++  KV Q DLA+    LM  R     + T++I++    RA    +A     RM 
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK------------------------D 246
           E GC PD + ++ ++S LC+  +  EA   ++ L+                        D
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498

Query: 247 KFE------------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
             E            PDV+ YT L+ G+C+A  + ++   F EM   G  P V TYSIVI
Sbjct: 499 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 558

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           D LC+  ++     +   MLE G  P++I + +++    K+   ++  ++Y  MK+ GC 
Sbjct: 559 DKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCA 618

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
              +TYN L+D  CK  +L++AI +L  M   GC P+  T+N +F    K  + + A R+
Sbjct: 619 PTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRL 678

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE--NEVEPNVN 463
           +  MK   C P    Y++L+      +  D  +++ +E  E   +V+P ++
Sbjct: 679 FQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEIS 729



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 178/379 (46%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+   D A    + M   +    V T++IL+  Y +     +       M 
Sbjct: 274 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +YGC P+ I ++ ++  L +  +  +A +     L+   +P    +  ++  +C+ G + 
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 393

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F+ M   G  P++YTY+I+I   CR  +I  A  +   M E GC P+ +T+N+++
Sbjct: 394 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KAS+ ++  +VY  ++  G   D +T + LID  CK  +L+DA K+L  M R G  
Sbjct: 454 SGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA 513

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   + ++     K   ++ +   + +M D  C P  +TY+I++     S        L
Sbjct: 514 PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCML 573

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            K M E  V P+   Y  +I   C    ++ AY+  + M +  C  P    Y +++ +L 
Sbjct: 574 LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGC-APTVVTYNVLVDKLC 632

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  +L +   L+E M   G
Sbjct: 633 KVSRLDEAIHLLEVMESDG 651


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 187/385 (48%), Gaps = 4/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ ++    +  Q   A   ++ M SR V     TF+ L++ +V  G    A+  
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
             RM E GC+  K+  +++I+  C+  R  +A  +    + D FEPD I Y   V G C+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             ++  A +V   M   G  P+V+TY+IV++ LC+ GQ+  A  +  +M++ GC P+  T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+      +R E+ L +  Q+   G   D  T+N LI+  CK G    A+++   M 
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+  T+N +   +  LG +  A  +   M+   C  +T+TYN ++         +
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              ++  +M+   +  N  T+  LI   C     ++A+  I +MI E  L+P +  Y  +
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEG-LQPNNITYNSI 537

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           L    + G ++K  +++E M   GF
Sbjct: 538 LTHYCKQGDIKKAADILETMTANGF 562



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 181/365 (49%), Gaps = 3/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D+M     +  V T++I+V    + G   EA    N+M + GC PD   F+ +I+
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   R  EA      +  K   PDV  +  L+   C+ G+   A R+F EMK +G  P
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+ +ID LC  G++ +A D+  +M   GC  ++IT+N ++    K  R E+  +V+
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM   G   + IT+N LID  CKD K++DA  ++N M+ +G  PN  T+N I     K 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A  +   M     E + VTY  L+     +  T + LK+ + M    + P    Y
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKM 524
             ++       +  +A    REM  E    P +  Y++V + L R  G +++  + + +M
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREM-AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663

Query: 525 VDRGF 529
           VD+GF
Sbjct: 664 VDKGF 668



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 188/400 (47%), Gaps = 4/400 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L   N   AR +F   P++Y E+I   G V   DL    +  M+    ++ +      + 
Sbjct: 58  LRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLD 117

Query: 192 RYVRAGLAAEAVH-AFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
            Y    L  +AV    N+++  +G   D + ++ ++++L    +    +S +  +  +  
Sbjct: 118 SYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGI 177

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV+ +  L++  CRA  +  A  +  EM   G+ P+  T++ ++      G I  A  
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V A MLE+GC    +T N L+  + K  R E  L    Q    G E D ITYN  ++  C
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++  +  A+KV++ MV++G +P+  T+N++  C+ K G +  A  +  +M D  C P+  
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+N L+    T    +  L L +++    V P+V T+ ILI   C +G  + A +   EM
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               C  P    Y  ++  L   G+L K  +L++ M   G
Sbjct: 418 KNSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 198/432 (45%), Gaps = 49/432 (11%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y ++I    +  + + A+     MKS  V   V T++IL+  + +AGL  +A 
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQAR 343

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             F+ M   GC+ + + ++ ++    + ++  +A   F+ + D    P+ I Y+ LV G 
Sbjct: 344 SWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403

Query: 263 CRAGNISEAERVFREM----------------KMAGIQPNVYTYSIVIDALCRCGQITRA 306
           C+AG I +A  V+ ++                    I PNV TY  +ID LC+  ++  A
Sbjct: 404 CKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA 463

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            ++   ML  GCEPN I ++ L+    K  + +   +V+ +M + G      TY  LID 
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDA 523

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             KD +L+ A+KVL+ MV   C PN  T+  +   + ++G+   A ++   M++  C PN
Sbjct: 524 MFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPN 583

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VTY  L+     S   D+ L+L  +M      PN  TYR+LI   C  G  + A+  + 
Sbjct: 584 VVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLS 643

Query: 487 EM--------------------------------IEEKCLKPGSSVYEMVLQQLRRAGQL 514
           EM                                +E     P + VY +++    +AG+L
Sbjct: 644 EMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRL 703

Query: 515 QKHEELVEKMVD 526
           ++  EL ++M++
Sbjct: 704 EEALELHKEMME 715



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 171/432 (39%), Gaps = 61/432 (14%)

Query: 157 LAGKVRQFDLAW--HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L G +++  L W    I++M           F+ LV  Y  A     A     RM + GC
Sbjct: 149 LTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGC 208

Query: 215 APDKIAFSIVISILCRKRR-------ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN 267
            P  +A++I I  +C           A   + + + L      + +   N  R  C  G 
Sbjct: 209 PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 268

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
              A ++ + M   G  P+  TYS VI  LC   ++ +A  +F EM  VG  P+  T+  
Sbjct: 269 FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTI 328

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    KA   E+    +++M+ +GC A+ +TY  L+  + K  +L  A  + N M+  G
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKM--------KDLKCE--------PNTVTYN 431
           C PN  T++ +   + K G++  A  +Y K+         D   E        PN VTY 
Sbjct: 389 CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYG 448

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN----------- 480
            L+     +       +L   M  N  EPN   Y  LI  +C +G  +N           
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKC 508

Query: 481 ------------------------AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
                                   A K + +M+E  C  P    Y  ++  L R G+ QK
Sbjct: 509 GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSC-TPNVVTYTAMIDGLCRIGECQK 567

Query: 517 HEELVEKMVDRG 528
             +L+  M ++G
Sbjct: 568 ALKLLSMMEEKG 579



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 140/350 (40%), Gaps = 9/350 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ LV+    AG           M E G   DK         LC++ R S+A    +  
Sbjct: 42  TYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIE-- 99

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           ++ F+ D ++ T ++ G   A    EA      M+     PNV TY  ++    +  Q+ 
Sbjct: 100 REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLG 159

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
               +   M++ GC PN   FN+L+  +  A       ++  +M   GC    + YN  I
Sbjct: 160 WCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFI 219

Query: 365 DCHCKDGKLED------AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
              C   +L        A KV   M+   C  N        RC+  +G  + A ++   M
Sbjct: 220 GSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVM 279

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
                 P+T TY+ ++     +   +    L +EM+   V P+V TY ILI  +C  G  
Sbjct: 280 MGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLI 339

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             A  +  EM    C       Y  +L    +A QL +  ++  +M+D G
Sbjct: 340 EQARSWFDEMRSIGC-SANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 141/307 (45%), Gaps = 13/307 (4%)

Query: 230 RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R+  +S + +    LKD  + P    Y  LV+    AG +    RV +EM  +G   + +
Sbjct: 17  RRACSSSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKF 76

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T      ALC+ G   R  D    +     + +++    ++   ++AS  ++ +   ++M
Sbjct: 77  TVGCFAQALCKEG---RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRM 133

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           +   C  + +TY  L+    K  +L    +++N M+++GCNPN S FN +        D 
Sbjct: 134 RCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDY 193

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK---STDMVLKLKKEMEE----NEVEPN 461
             A+++  +M D  C P  V YNI +      +   S D++   +K  EE    + V   
Sbjct: 194 PYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNK 253

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           VNT      + CGMG ++ A++ I+ M+  K   P +S Y  V+  L  A +++K   L 
Sbjct: 254 VNTANFARCL-CGMGKFDMAFQIIKVMM-GKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 311

Query: 522 EKMVDRG 528
           ++M   G
Sbjct: 312 QEMKSVG 318



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 140/375 (37%), Gaps = 66/375 (17%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  +   A   +D M S   E     +  L+  + + G    A   F RM 
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P    ++ +I  + + RR   A      + +    P+V+ YT ++ G CR G   
Sbjct: 507 KCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQ 566

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++   M+  G  PNV TY+ +ID L + G++  +  +F +M   GC PN +T+  L+
Sbjct: 567 KALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626

Query: 330 RVHVKASRTEKVLQVYNQMKRL---------------------------------GCEAD 356
                A   ++   + ++MK+                                  G    
Sbjct: 627 NHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPI 686

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
              Y  LID   K G+LE+A+++   M+    + N ++ +M                   
Sbjct: 687 APVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDM------------------- 727

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
                        Y  L+Q    +   +   +L  E+    V P ++ +  LI     + 
Sbjct: 728 -------------YTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVN 774

Query: 477 HWNNAYKYIREMIEE 491
            WN A +    + +E
Sbjct: 775 KWNEALQLCYSICDE 789



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 115/243 (47%), Gaps = 6/243 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MI+   ++ +   A   + +M+ +     V T++ L+    ++G    ++  F +M 
Sbjct: 552 YTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMS 611

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV-YTNLVRGWCRAGNIS 269
             GCAP+ + + ++I+  C      EA S    +K  + P  +  Y ++V+G+ +     
Sbjct: 612 TKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFI 669

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT---FN 326
            +  +  E++  G  P    Y ++ID   + G++  A ++  EM+E+    N  +   + 
Sbjct: 670 ASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYT 729

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +L++    AS+ EK  ++Y+++ R G   +   +  LI    K  K  +A+++  S+  +
Sbjct: 730 SLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDE 789

Query: 387 GCN 389
           G N
Sbjct: 790 GVN 792


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 211/437 (48%), Gaps = 8/437 (1%)

Query: 95  SLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEM 154
           ++  S+      I+PS V   I  +C    G  +    S    V  R   +++  L   M
Sbjct: 97  AISLSKQMGLRGITPSIVTLSILINCYCHLG-HMGFAFSVLGMVLKRGYQLNAITLTTIM 155

Query: 155 INLA--GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
             L   G+VR+   A  F D + ++   +   T+  L+    + GL  EA    ++ME  
Sbjct: 156 KGLCINGEVRK---ALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQ 212

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEA 271
              P+ + +++++  LC+    +EA+  + D +    +PDV  YT L+ G+C  G   E 
Sbjct: 213 VVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREV 272

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            R+  +M    +  NVYTY+I+IDALC+ G + +AHD+   M+E G  P+ +TFN LM  
Sbjct: 273 TRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG 332

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +   +   +  ++++     G   D  +YN LI  +CK+ ++++A+ + N M  K   PN
Sbjct: 333 YCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPN 392

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T++ +   + K G ++ A  ++  + D    PN +TYNI++      +  D  ++L  
Sbjct: 393 IVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFN 452

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M E  + PNV++Y ILI  YC     + A     EM   + L P S  Y  ++  L ++
Sbjct: 453 LMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEM-HRRNLVPDSVTYNCLIDGLCKS 511

Query: 512 GQLQKHEELVEKMVDRG 528
           G++    EL   M D G
Sbjct: 512 GRISHAWELFNVMHDGG 528



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 143/266 (53%), Gaps = 1/266 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  RNV + V T++IL+    + G+  +A    N M E G  PD + F+ ++S  C    
Sbjct: 279 MVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYND 338

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA+  FD+  +    PDV  Y  L+ G+C+   I EA  +F +M    + PN+ TYS 
Sbjct: 339 VVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSS 398

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID LC+ G+I+ A ++F+ + + G  PN IT+N ++    K    +K ++++N M   G
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              +  +YN LI+ +CK  ++++A+ +   M R+   P++ T+N +   + K G ++ A 
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFA 438
            ++  M D     + +TYNIL   F+
Sbjct: 519 ELFNVMHDGGPPVDVITYNILFDAFS 544



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 1/259 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K      A    +LM  R     + TF+ L+  Y       EA   F+   
Sbjct: 291 YNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFA 350

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD  +++I+I   C+  R  EA S F+ +   K  P+++ Y++L+ G C++G IS
Sbjct: 351 ECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRIS 410

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  +   G  PNV TY+I++DALC+   + +A ++F  M E G  PN  ++N L+
Sbjct: 411 YAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILI 470

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K+ R ++ + ++ +M R     D++TYN LID  CK G++  A ++ N M   G  
Sbjct: 471 NGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPP 530

Query: 390 PNASTFNMIFRCISKLGDV 408
            +  T+N++F   SK+  V
Sbjct: 531 VDVITYNILFDAFSKIQHV 549



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 154/370 (41%), Gaps = 37/370 (10%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K++ +  A      M  R +  ++ T SIL+  Y   G    A      + + G   + I
Sbjct: 90  KMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAI 149

Query: 220 AFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
             + ++  LC      +A  F DS+    F  D + Y  L+ G C+ G   EA  +  +M
Sbjct: 150 TLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM 209

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +   ++PNV  Y++++D LC+ G +T A D++++++  G +P                  
Sbjct: 210 EGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDP------------------ 251

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
                            D  TY  LI   C  G+  +  ++L  MV +  N N  T+N++
Sbjct: 252 -----------------DVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNIL 294

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + K G +  AH M   M +    P+ VT+N LM  +          KL     E  +
Sbjct: 295 IDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI 354

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+V +Y ILI  YC     + A     +M  +K L P    Y  ++  L ++G++    
Sbjct: 355 TPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK-LAPNIVTYSSLIDGLCKSGRISYAW 413

Query: 519 ELVEKMVDRG 528
           EL   + D G
Sbjct: 414 ELFSAIHDGG 423



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 12/311 (3%)

Query: 231 KRRASEAQSFFDSLKDKFE-----------PDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           +++ ++ +S FD++ D              P V+ +  ++    +  +   A  + ++M 
Sbjct: 46  QKQNAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMG 105

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
           + GI P++ T SI+I+  C  G +  A  V   +L+ G + N+IT   +M+         
Sbjct: 106 LRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVR 165

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           K L+ ++ +   G   D +TY  LI+  CK G   +A ++L+ M  +   PN   +NMI 
Sbjct: 166 KALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIV 225

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + K G V  A  +Y  +     +P+  TY  L+  F        V +L  +M +  V 
Sbjct: 226 DGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVN 285

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            NV TY ILI   C  G    A+  +R ++ E+  +P    +  ++        + +  +
Sbjct: 286 LNVYTYNILIDALCKKGMLGKAHD-MRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARK 344

Query: 520 LVEKMVDRGFT 530
           L +   + G T
Sbjct: 345 LFDTFAECGIT 355


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 190/406 (46%), Gaps = 37/406 (9%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           KV+++         M S  +   V T ++L+  +        A     ++ + GC PD  
Sbjct: 86  KVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTA 145

Query: 220 AFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           +F+ +I  LC + +  EA   FD +  + F+PDV++Y  L+ G C+ G+ S A R+ R M
Sbjct: 146 SFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM 205

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV------- 331
           +    QP+V  Y  +I +LC+  Q T+A ++F+EM+  G  PN +T N+L+         
Sbjct: 206 EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEW 265

Query: 332 -HV---------------------------KASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            HV                           K     +   V + M + G E D +TY  L
Sbjct: 266 KHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTAL 325

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID HC   ++++A+KV + MV KGC PN  ++N +     K+  ++ A  ++ +M   K 
Sbjct: 326 IDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PNTVTYN L+            + L +EM      P++ TYRIL+   C   H + A  
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  IE   L P   +Y +V+  + RAG+L+   +L   +  +G 
Sbjct: 446 LLKA-IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGL 490



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 176/370 (47%), Gaps = 2/370 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q   A H  D M     +  V  ++ L+    + G  + A+     ME+  C PD + + 
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC+ R+ ++A + F  +  K   P+++   +LV   C  G       +  EM  +
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            I PN  + + V+DALC+ G + +AHDV   M + G EP+ +T+  L+  H   S  ++ 
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           ++V++ M   GC  +  +YN LI+ +CK  +++ A+ +   M R+   PN  T+N +   
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +  +G +  A  ++ +M      P+ VTY IL+     +   D  + L K +E + ++P+
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           +  Y I+I   C  G   +A      +   K LKP    Y ++   L + G L +  +L 
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNL-SSKGLKPNVWTYNIMTHGLCKRGLLDEATKLF 517

Query: 522 EKMVDRGFTA 531
            +M +   +A
Sbjct: 518 MEMDENACSA 527



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 175/393 (44%), Gaps = 40/393 (10%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I   C   H    +++L        +P+ V    +Y  +I+   K RQ   A++    M
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEKGNCQPDVV----VYGTLIHSLCKDRQQTQAFNLFSEM 240

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
            ++ +   + T + LV      G         N M +    P+ I+ + V+  LC++   
Sbjct: 241 ITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMV 300

Query: 235 SEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           ++A    D + +   EPDV+ YT L+ G C    + EA +VF  M   G  PNV++Y+ +
Sbjct: 301 AQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTL 360

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I+  C+  ++ +A  +F EM      PN++T+N L+       R +  + ++ +M   G 
Sbjct: 361 INGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQ 420

Query: 354 EADTITYNFLID-----CH------------------------------CKDGKLEDAIK 378
             D +TY  L+D     CH                              C+ G+LEDA  
Sbjct: 421 IPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARD 480

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           + +++  KG  PN  T+N++   + K G ++ A +++ +M +  C  +  TYN + Q F 
Sbjct: 481 LFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFL 540

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            +  T   ++L +EM       +V+T  +L+ M
Sbjct: 541 RNNETSRAIQLLEEMLARGFSCDVSTTTLLVGM 573



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 8/265 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+ + D A +  + M  + +     T++ L+      G   +A+  F  M 
Sbjct: 357 YNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMV 416

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + + I++  LC+     +A +   +++    +PD+ +YT ++ G CRAG + 
Sbjct: 417 ACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELE 476

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F  +   G++PNV+TY+I+   LC+ G +  A  +F EM E  C  +  T+N + 
Sbjct: 477 DARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTIT 536

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG-------KLEDAIKVLNS 382
           +  ++ + T + +Q+  +M   G   D  T   L+     DG       KLED    L  
Sbjct: 537 QGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRI 596

Query: 383 MVRKGCNPNASTFNMIFRCISKLGD 407
            V+          N + + IS L D
Sbjct: 597 QVKDTVFCKEDDINALGKVISDLND 621



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A   + +M  +   P+ V +  ++      K    VL L ++M+   +  NV T  +
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI  +C +   N A+  + ++++  C +P ++ +  +++ L   GQ+ +   L +KM+  
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGC-QPDTASFTTLIKGLCLEGQIGEALHLFDKMIWE 173

Query: 528 GF 529
           GF
Sbjct: 174 GF 175


>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g62470, mitochondrial; Flags: Precursor
 gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
 gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
 gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 599

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 200/390 (51%), Gaps = 2/390 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   R  F H    Y+ M+++  K RQF+     ++ M ++ + +T++TF+I ++ +
Sbjct: 181 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 239

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             A    +AV  F  M++Y         + ++  L R +   EAQ  FD LK++F P+++
Sbjct: 240 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 299

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+ GWCR  N+ EA R++ +M   G++P++  ++++++ L R  + + A  +F  M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  ++  ++R   K S  E  ++ ++ M   G + D   Y  LI       KL
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +   ++L  M  KG  P+  T+N + + ++       A R+Y KM   + EP+  T+N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M+ +  +++ +M   + +EM +  + P+ N+Y +LI    G G    A +Y+ EM+ +K 
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML-DKG 538

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +K     Y        R GQ +  EEL ++
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQR 568


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 198/381 (51%), Gaps = 9/381 (2%)

Query: 157 LAGKVRQ---FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           L+G V++    D+ + + +++K R +E+ V +F+I+V    + G    A      M+ +G
Sbjct: 127 LSGLVKESENGDMEFVYREMIK-RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG 185

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE----PDVIVYTNLVRGWCRAGNIS 269
            +P+ I ++ +I   C+  R  +       LK+       P+ + Y  L+ G+C+  N+S
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVS 245

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A RVF EM+  G++PNV TY+I+I+ LC  G++  A  +  +M+    EPN +T N L+
Sbjct: 246 GAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLI 305

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K     + + ++N M++ G + + +TY  LID +CKDG++EDA  + N M+ +G  
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P  ST+N +   + + GDV  A  +  +M   K   + VTYNIL+        +   +KL
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM E  + P+  TY  L+  YC  G+   A   +R  +E K  +     + ++++   
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL-IVRTRMERKGKQANVVTHNVLIKGFC 484

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
             G+L+    L+ +M++RG  
Sbjct: 485 LKGRLEDANGLLNEMLERGLV 505



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 189/404 (46%), Gaps = 20/404 (4%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           +L +F W     +  HS +L   ++N     +++     F+D       + +V       
Sbjct: 15  ILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAI---- 70

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
                        HA +   +  C    +A  +V++ +   +     ++F  +    F+ 
Sbjct: 71  ------------FHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKL 118

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
            +I    L+ G  +     + E V+REM    I+ NV +++IV++ LC+ G++ RA DV 
Sbjct: 119 SLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVI 178

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ---VYNQMKRLGCEADTITYNFLIDCH 367
            +M   G  PN IT+N L+  + K  R  K+ +   +  +M   G   + +TYN LID  
Sbjct: 179 EDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGF 238

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CKD  +  A++V   M R+G  PN  T+N++   +   G V+ A  +  +M     EPN 
Sbjct: 239 CKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNV 298

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VT+N+L+  F  +K+ +  + L  +ME+  V+PN  TY  LI  YC  G   +A+     
Sbjct: 299 VTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNM 358

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           MI ++ + P  S Y  ++  L R G ++    L+ +MV +  +A
Sbjct: 359 MI-DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSA 401



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 1/285 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++IL+  + +    + A+  F  M+  G  P+ + ++I+I+ LC   +  EA +  D +
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM 289

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                EP+V+ +  L+ G+C+   ++EA  +F +M+  G+ PN  TY+ +IDA C+ G++
Sbjct: 290 VSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRM 349

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  ++  M++ G  P   T+N L+    +    +    + N+M      AD +TYN L
Sbjct: 350 EDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNIL 409

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK G+   A+K+L+ M  KG NP+  T+N +     + G++  A  +  +M+    
Sbjct: 410 IDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK 469

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + N VT+N+L++ F      +    L  EM E  + PN  TY I+
Sbjct: 470 QANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 139/281 (49%), Gaps = 8/281 (2%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           N++G +R F         M+ + +   V T++IL+      G   EAV   ++M      
Sbjct: 243 NVSGAMRVFGE-------MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE 295

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+ +  +++I+  C+ +  +EA + F+ + K   +P+ + YT L+  +C+ G + +A  +
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           +  M   GI P V TY+ +I  LCR G +  A  +  EM+      + +T+N L+    K
Sbjct: 356 YNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
              + K +++ ++M   G     +TYN L+D +C++G L  A+ V   M RKG   N  T
Sbjct: 416 KGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            N++ +     G +  A+ +  +M +    PN  TY I+ +
Sbjct: 476 HNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE 516



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 41/267 (15%)

Query: 138 VTARPEFVHS---PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           V  R + V S   P++  ++ +IN   K +  + A +  + M+ + V+    T++ L+  
Sbjct: 283 VALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDA 342

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPD 251
           Y + G   +A   +N M + G  P+   ++ +I+ LCRK     A+S  + +   K   D
Sbjct: 343 YCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSAD 402

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           V+ Y  L+   C+ G   +A ++  EM   G+ P+  TY+ ++D  CR G +  A  V  
Sbjct: 403 VVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRT 462

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
            M   G + N +T                                   +N LI   C  G
Sbjct: 463 RMERKGKQANVVT-----------------------------------HNVLIKGFCLKG 487

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +LEDA  +LN M+ +G  PN +T+ +I
Sbjct: 488 RLEDANGLLNEMLERGLVPNRTTYEII 514


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 2/368 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q  LA   +  M     E    T   LV  + R    ++AV   ++M E G  PD +A++
Sbjct: 238 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 297

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC+ +R ++A  FF  ++ K   P+V+ YT LV G C +   S+A R+  +M   
Sbjct: 298 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 357

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            I PNV TYS ++DA  + G++  A ++F EM+ +  +P+ +T+++L+       R ++ 
Sbjct: 358 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 417

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            Q+++ M   GC AD ++YN LI+  CK  ++ED +K+   M ++G   N  T+N + + 
Sbjct: 418 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 477

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             + GDV+ A   + +M      P+  TYNIL+     +   +  L + ++M++ E++ +
Sbjct: 478 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 537

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           + TY  +I   C  G    A+     +   K LKP    Y  ++  L   G L + E L 
Sbjct: 538 IVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 596

Query: 522 EKMVDRGF 529
            KM   G 
Sbjct: 597 TKMKQEGL 604



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 184/355 (51%), Gaps = 2/355 (0%)

Query: 167  AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            A   +D M     +    TF+ L+        A+EA+   +RM   GC PD + + +V++
Sbjct: 784  AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 843

Query: 227  ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             LC++     A +  + + + K EP V++Y  ++ G C+  ++ +A  +F+EM+  GI+P
Sbjct: 844  GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 903

Query: 286  NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            NV TYS +I  LC  G+ + A  + ++M+E    P+  TF+ L+   VK  +  +  ++Y
Sbjct: 904  NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 963

Query: 346  NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            ++M +   +   +TY+ LI+  C   +L++A ++   MV K C P+  T+N + +   K 
Sbjct: 964  DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 1023

Query: 406  GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
              V     ++ +M       NTVTYNIL+Q    +   DM  ++ KEM  + V PN+ TY
Sbjct: 1024 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 1083

Query: 466  RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
              L+   C  G    A   + E ++   ++P    Y ++++ + +AG+++   +L
Sbjct: 1084 NTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 1137



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 4/387 (1%)

Query: 148  PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            PDL  Y  ++N   K    DLA++ ++ M+   +E  V  ++ ++    +     +A++ 
Sbjct: 833  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 892

Query: 206  FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
            F  ME  G  P+ + +S +IS LC   R S+A     D ++ K  PDV  ++ L+  + +
Sbjct: 893  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952

Query: 265  AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             G + EAE+++ EM    I P++ TYS +I+  C   ++  A  +F  M+   C P+ +T
Sbjct: 953  EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012

Query: 325  FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            +N L++   K  R E+ ++V+ +M + G   +T+TYN LI    + G  + A ++   MV
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072

Query: 385  RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
              G  PN  T+N +   + K G +  A  ++  ++  K EP   TYNI+++    +   +
Sbjct: 1073 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 1132

Query: 445  MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
                L   +    V+P+V  Y  +I+ +C  G    A    +EM E+  L P S  Y  +
Sbjct: 1133 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTL 1191

Query: 505  LQQLRRAGQLQKHEELVEKMVDRGFTA 531
            ++   R G  +   EL+++M   GF  
Sbjct: 1192 IRARLRDGDREASAELIKEMRSCGFAG 1218



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 152/288 (52%), Gaps = 1/288 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + +K +  P +I ++ L+    +         +  +M+  GI  N YTYSI+I+  CR
Sbjct: 683 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 742

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             Q+  A  V  +M+++G EPN +T ++L+  +  + R  + + + +QM   G + +T+T
Sbjct: 743 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 802

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N LI       K  +A+ +++ MV KGC P+  T+ ++   + K GD + A  +  KM+
Sbjct: 803 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 862

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K EP  + YN ++      K  D  L L KEME   + PNV TY  LI+  C  G W+
Sbjct: 863 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 922

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +A + + +MIE K + P    +  ++    + G+L + E+L ++MV R
Sbjct: 923 DASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 164/358 (45%), Gaps = 5/358 (1%)

Query: 115  VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
            +I+  C  +H    L +         RP  V     Y  +I+      ++  A   +  M
Sbjct: 876  IIDGLCKYKHMDDALNLFKEMETKGIRPNVVT----YSSLISCLCNYGRWSDASRLLSDM 931

Query: 175  KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
              R +   V TFS L+  +V+ G   EA   ++ M +    P  + +S +I+  C   R 
Sbjct: 932  IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991

Query: 235  SEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             EA+  F+ +  K   PDV+ Y  L++G+C+   + E   VFREM   G+  N  TY+I+
Sbjct: 992  DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 294  IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
            I  L + G    A ++F EM+  G  PN +T+N L+    K  + EK + V+  ++R   
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111

Query: 354  EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
            E    TYN +I+  CK GK+ED   +  ++  KG  P+   +N +     + G    A  
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 1171

Query: 414  MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            ++ +MK+    PN+  YN L++        +   +L KEM       + +T  ++  M
Sbjct: 1172 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 1229



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/518 (21%), Positives = 227/518 (43%), Gaps = 26/518 (5%)

Query: 15   SQQIPKAYSFFSSLAPLNEDDDGDCVTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKN 74
            + ++ +A+S F SL+      D    T   S   T  L  E   +   +  + ++   KN
Sbjct: 551  TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE---VEALYTKMKQEGLMKN 607

Query: 75   PNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSF 134
                S+ + +L+ +     LS G++         PS ++ +    C         + LS 
Sbjct: 608  DCTLSDGDITLSAELIKKMLSCGYA---------PSLLKDIKSGVCK--------KALSL 650

Query: 135  FNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYV 194
                + +  + +   L     N   +++  D    F +++KSR     ++ FS L+    
Sbjct: 651  LRAFSGKTSYDYREKLSR---NGLSELKLDDAVALFGEMVKSRPFPSIIE-FSKLLSAIA 706

Query: 195  RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVI 253
            +       +    +M+  G   +   +SI+I+  CR+ +   A +    + K  +EP+++
Sbjct: 707  KMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIV 766

Query: 254  VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
              ++L+ G+C +  ISEA  +  +M + G QPN  T++ +I  L    + + A  +   M
Sbjct: 767  TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 826

Query: 314  LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            +  GC+P+ +T+  ++    K   T+    + N+M++   E   + YN +ID  CK   +
Sbjct: 827  VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 886

Query: 374  EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +DA+ +   M  KG  PN  T++ +  C+   G  + A R+   M + K  P+  T++ L
Sbjct: 887  DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 946

Query: 434  MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
            +  F          KL  EM +  ++P++ TY  LI  +C     + A +    M+ + C
Sbjct: 947  IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 1006

Query: 494  LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
              P    Y  +++   +  ++++  E+  +M  RG   
Sbjct: 1007 F-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 1043



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 141 RPEFVHSPDLYHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           RP  V     Y  ++N L    R  D A    D++K + +   V T+S L+  +V+ G  
Sbjct: 325 RPNVVT----YTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKV 379

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
            EA   F  M      PD + +S +I+ LC   R  EA   FD +  K    DV+ Y  L
Sbjct: 380 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 439

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+C+A  + +  ++FREM   G+  N  TY+ +I    + G + +A + F++M   G 
Sbjct: 440 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 499

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+  T+N L+         EK L ++  M++   + D +TY  +I   CK GK+E+A  
Sbjct: 500 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 559

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +  S+  KG  P+  T+  +   +   G ++    +Y KMK
Sbjct: 560 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 141/292 (48%), Gaps = 1/292 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D +K +  P ++ +  L+    +         + ++M++ GI+ ++YT++IVI+  C 
Sbjct: 176 FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 235

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C Q++ A  +  +ML++G EP+ +T  +L+    + +R    + + ++M  +G + D + 
Sbjct: 236 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 295

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN +ID  CK  ++ DA      + RKG  PN  T+  +   +      + A R+   M 
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K  PN +TY+ L+  F  +       +L +EM    ++P++ TY  LI   C     +
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            A +    M+ + CL    S Y  ++    +A +++   +L  +M  RG  +
Sbjct: 416 EANQMFDLMVSKGCLADVVS-YNTLINGFCKAKRVEDGMKLFREMSQRGLVS 466



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 115/224 (51%), Gaps = 1/224 (0%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A D+F++M++    P+ + FN L+   VK  + + V+ +  +M+ LG   D  T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+C C   ++  A+ +L  M++ G  P+  T   +     +   V+ A  +  KM ++
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +P+ V YN ++     +K  +      KE+E   + PNV TY  L+   C    W++A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            + + +MI++K + P    Y  +L    + G++ + +EL E+MV
Sbjct: 348 ARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMV 390



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 1/148 (0%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +++   K  + + A    + ++   +E T+ T++I++    +AG   +    F  + 
Sbjct: 1083 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 1142

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
              G  PD +A++ +IS  CRK    EA + F  +K D   P+   Y  L+R   R G+  
Sbjct: 1143 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 1202

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDAL 297
             +  + +EM+  G   +  T  +V + L
Sbjct: 1203 ASAELIKEMRSCGFAGDASTIGLVTNML 1230


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 212/430 (49%), Gaps = 37/430 (8%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           +FN +  +  FV   + ++ ++        F+  W F +  K + V + V +F I+++  
Sbjct: 116 YFNEMVDKG-FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGC 173

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEPDV 252
             AG   ++      + E+G +P+ + ++ +I   C+K    +A+  FF+  K     + 
Sbjct: 174 CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANE 233

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             YT L+ G  + G   +   ++ +M+  G+ PN+YTY+ V++ LC+ G+   A  VF E
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDE 293

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M E G   N +T+N L+    +  +  +  +V +QMK      + ITYN LID  C  GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGK 353

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           L  A+ +   +  +G +P+  T+N++     + GD +GA +M  +M++   +P+ VTY I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI--- 489
           L+  FA S + +  ++L+  MEE  + P+V+TY +LI  +C  G  N A +  + M+   
Sbjct: 414 LIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKM 473

Query: 490 -------------------------------EEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
                                          EEK L P  + Y  +++ L +  +L++ E
Sbjct: 474 LEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAE 533

Query: 519 ELVEKMVDRG 528
           +LVEKM+D G
Sbjct: 534 DLVEKMIDSG 543



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 197/389 (50%), Gaps = 5/389 (1%)

Query: 144 FVHSPDLYHEMINLAGKVR-QFDLAWHFID-LMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           + H+  L  ++I  +GK++ QF  +   +  L +S   +     + +++  YV++     
Sbjct: 55  YSHAQSLLLQVI--SGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDS 112

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           +++ FN M + G  P    F+ +++ +      ++   FF+  K K   DV  +  +++G
Sbjct: 113 SIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKG 172

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C AG I ++  +  E++  G  PNV  Y+ +ID  C+ G+I +A D+F EM + G   N
Sbjct: 173 CCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVAN 232

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  L+    K    ++  ++Y +M+  G   +  TYN +++  CKDG+ +DA KV +
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFD 292

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M  +G + N  T+N +   + +    N A+++  +MK     PN +TYN L+  F +  
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVG 352

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                L L ++++   + P++ TY +L++ +C  G  + A K ++EM EE+ +KP    Y
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM-EERGIKPSKVTY 411

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +++    R+  ++   +L   M + G  
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLV 440



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 36/270 (13%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A+   D M+ R V   + T++ L+    R   A EA    ++M+ Y   P+ I ++ +I 
Sbjct: 287 AFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLID 346

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C   +  +A S    LK +   P ++ Y  LV G+CR G+ S A ++ +EM+  GI+P
Sbjct: 347 GFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406

Query: 286 -----------------------------------NVYTYSIVIDALCRCGQITRAHDVF 310
                                              +V+TYS++I   C  GQ+  A  +F
Sbjct: 407 SKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
             M+E   EPN + +N ++  + K   + + L+++  M+      +  +Y++LI   CK+
Sbjct: 467 KSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKE 526

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            KL++A  ++  M+  G +P+ +  N+I R
Sbjct: 527 RKLKEAEDLVEKMIDSGIDPSDTICNLISR 556


>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
          Length = 586

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 134 FFNWVTARPE----FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           FF W  A       F H+   Y +M+++ GK RQF      I  M  +   + +D F I 
Sbjct: 203 FFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQEM-GKEGALCMDAFKIA 261

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           ++ +  AG    AV  F  M  +G      +F+ ++  L ++    EA   FD ++D++ 
Sbjct: 262 IKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYA 321

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD+  YT L+  WC A N+ EA RV+ EM   G++P+V  ++ +I+ L R  +   A  +
Sbjct: 322 PDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKM 381

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M   G  PN  T+  L+R H K  + +  ++ + +M+ +GC+ D  TY  L+  +  
Sbjct: 382 FELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGN 441

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +++    +L  M +KGC P+  T+N + + ++     + A R+Y KM     EP   T
Sbjct: 442 AKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHT 501

Query: 430 YNILMQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           YN++M+  F   ++  M   + +EM    + P+VN+Y + I  +   G    A KYI EM
Sbjct: 502 YNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEM 561

Query: 489 IEEKCLKP 496
           I++    P
Sbjct: 562 IQKGMKTP 569



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 10/315 (3%)

Query: 222 SIVISILCRKRRASE-AQSFF------DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           ++V+++L R + A   +  FF       +    F    I Y  +V    +A        +
Sbjct: 184 TLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVAL 243

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
            +EM   G    +  + I I +    G+I  A  VF  M   G +    +FN L+    +
Sbjct: 244 IQEMGKEGAL-CMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQ 302

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
                +  QV+++M R     D  +Y  L+   C    L +A +V N M+  G  P+   
Sbjct: 303 EGLGREANQVFDRM-RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVV 361

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
            N +   + +      A +M+  MK     PN  TY +L++        DM ++  +EM+
Sbjct: 362 HNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQ 421

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           +   +P+V TY  L+  Y      +     + EM ++ C  P    Y  +++ L      
Sbjct: 422 DVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGC-PPDGRTYNALIKLLTNRNMP 480

Query: 515 QKHEELVEKMVDRGF 529
                + +KM+ +G 
Sbjct: 481 DDAARIYKKMIKKGL 495


>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 123 RHGIPLLQVLSFFNWVT-ARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNV 179
           RH         FFNW +    E  +SP   +++E++++ G++R+F       D M  R  
Sbjct: 127 RHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKG 186

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
            +   TF +L+ RY  A    EAV  FN+ +  G   D IAF  ++  LCR +    A+ 
Sbjct: 187 LVNERTFGVLLNRYAAAHKTEEAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEF 246

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            F S K++F PD+     ++ GWC  G++ EA+R + ++  +  +P+ +TY I I++L +
Sbjct: 247 LFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTK 306

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G+++ A  +F  M E GC P+    N ++       R  + L+V  +M    C+ D  T
Sbjct: 307 AGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVAT 366

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN LI   CK  + E   ++L+ M +KGC PNA T+  + +   K  +V G   +  +M+
Sbjct: 367 YNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPG---ILERME 423

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
              C  N+  YN++++++        +     EME N + P+  TY I+I      G  +
Sbjct: 424 RNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMD 483

Query: 480 NAYKYIREM 488
           +A  Y ++M
Sbjct: 484 DALSYFKQM 492



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 7/237 (2%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           G +R+    W+ I   K +  + T   + I +    +AG  + AV  F  M E GC PD 
Sbjct: 273 GSLREAKRFWNDIITSKCKPDKFT---YGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDV 329

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
              + +I  LC K+R  EA      + ++  +PDV  Y +L++  C+     +   +  +
Sbjct: 330 AICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDD 389

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+  G  PN  TY  ++ +  +  ++     +   M   GC  NS  +N ++++++    
Sbjct: 390 MEQKGCLPNARTYGYLLKSTKKPEEVP---GILERMERNGCRMNSDCYNLILKLYMDWGY 446

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             K+    ++M+R G   D  TY  +I      G+++DA+     M   G  P   T
Sbjct: 447 ELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT 503



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 120/277 (43%), Gaps = 35/277 (12%)

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           +G  P    ++ ++D L R  +      +F EM +     N  TF  L+  +  A +TE+
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEE 208

Query: 341 VLQVYNQMKRLGCEADTITY----------------------------------NFLIDC 366
            ++++N+ K LG E D I +                                  N +++ 
Sbjct: 209 AVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNG 268

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C  G L +A +  N ++   C P+  T+ +    ++K G ++ A +++  M +  C P+
Sbjct: 269 WCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPD 328

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
               N ++      K     L++ +EM E + +P+V TY  LI   C +  +   Y+ + 
Sbjct: 329 VAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLD 388

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +M ++ CL P +  Y  +L+  ++  ++    E +E+
Sbjct: 389 DMEQKGCL-PNARTYGYLLKSTKKPEEVPGILERMER 424



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/277 (19%), Positives = 113/277 (40%), Gaps = 49/277 (17%)

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM--- 313
           NL++ + R  ++SE E    + +++       T  +V+D L R     R   VF      
Sbjct: 92  NLLKTY-RDSSVSEIEGALHQCRLS------LTDDLVLDVLKRHRSDWRPAYVFFNWASR 144

Query: 314 --LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
             +E G  P     N ++ +  +  R  ++ Q++++M +     +  T+  L++ +    
Sbjct: 145 CGIESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAH 204

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           K E+A+K+ N                                   K K L  E + + + 
Sbjct: 205 KTEEAVKIFN-----------------------------------KRKGLGFELDLIAFQ 229

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            L+      K  +M   L    ++NE  P++ +  +++  +C +G    A ++  ++I  
Sbjct: 230 TLLMSLCRYKHVEMAEFLFHS-KKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIITS 288

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           KC KP    Y + +  L +AG+L    +L + M ++G
Sbjct: 289 KC-KPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKG 324



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 35/174 (20%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLV 259
           EA+     M E  C PD   ++ +I  LC+ +R  +     D ++ K   P+   Y  L+
Sbjct: 347 EALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLL 406

Query: 260 -----------------RGWCRA---------------GNISEAERVFREMKMAGIQPNV 287
                            R  CR                G   +      EM+  G+ P+ 
Sbjct: 407 KSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQ 466

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGC--EPNSITFNNLMRVHVKASRTE 339
            TY+I+I  L   G++  A   F +M  +G   EP +    N M + +K    E
Sbjct: 467 RTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKEREAE 520


>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
 gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
          Length = 502

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 195/407 (47%), Gaps = 15/407 (3%)

Query: 130 QVLSFFNWVTARPEFVH--SPDLYHEMINLAGKVRQ-FDLAWHFIDLMKSRNVEITVDTF 186
           + L FF+ +   PE     SP      ++LA ++R    L    + L     +  T  TF
Sbjct: 83  RALLFFHALLRLPERSRDLSPCTVDLALDLAARLRHPRQLTSSILALFPRHGLAFTPRTF 142

Query: 187 SILVRRY-VRAGLAAEAVHAFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            I+  R+ V       AV  F  +   +G A D   F+ ++  L + R A +A S   +L
Sbjct: 143 PIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRAL 202

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           + +F PD + Y  L  GWCR  + S A  + R+M  +GI P   TY+I++    R GQ+ 
Sbjct: 203 ERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQ 262

Query: 305 RAHDVFAEMLEVG-----CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            A D F +M + G     C+P+ +++  ++     A + +K  +V+++M R GC     T
Sbjct: 263 HAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIAT 322

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN LI   CK G +EDA+ V + M+RKG  PN  T+ ++ R +   G ++ A ++  KMK
Sbjct: 323 YNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMK 382

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN-EVEPNVNTYRILITMYCGMGHW 478
              CEPN  TYN+L+         +  L L + M +  E  PN +TY I+I+        
Sbjct: 383 REGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRA 442

Query: 479 NN---AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            +   A + + EM++   L P   ++  VL  L   G  +   EL+ 
Sbjct: 443 EDMAVAARMVVEMVDRGYL-PRRFMFNRVLNGLMLTGNQELSRELLR 488



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+L+   VK+    K   +   ++R     D +TYN L D  C+      A+ +L  MV
Sbjct: 179 FNSLLDALVKSRHAGKAASLVRALER-RFPPDAVTYNTLADGWCRVKDTSRALDILRQMV 237

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK-----DLKCEPNTVTYNILMQMFAT 439
             G  P  +T+N+I +   + G +  A   + +MK     D  C+P+ V+Y  ++     
Sbjct: 238 ESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGV 297

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +   D   K+  EM      P++ TY  LI + C  G+  +A     +MI +  + P   
Sbjct: 298 AGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYI-PNVV 356

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y ++++ L  AG++ +  +L++KM   G
Sbjct: 357 TYTVLIRGLCHAGKIDRAMKLLDKMKREG 385



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 8/163 (4%)

Query: 374 EDAIKVLNSMVRK-GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           + A++   S+ R  G   +   FN +   + K      A  +   ++  +  P+ VTYN 
Sbjct: 157 DHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALER-RFPPDAVTYNT 215

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI--- 489
           L   +   K T   L + ++M E+ + P   TY I++  +   G   +A+ +  +M    
Sbjct: 216 LADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRG 275

Query: 490 --EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +E C KP    Y  VL  L  AGQL K  ++ ++M   G T
Sbjct: 276 SNDENC-KPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCT 317


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 196/389 (50%), Gaps = 4/389 (1%)

Query: 146 HSPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            +PD Y     L G   +  L      + LM    + +    F+IL+R Y +     +A+
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAM 315

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
            AF  M + G +P+ + ++ VI ILC+  R  +A S F  +  +   PD+I +T+L+ G 
Sbjct: 316 TAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G   + E++  EM   GI PN    + ++D+LC+ G++  AHD F +++ VG +P+ 
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDV 435

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +++  L+  +    + ++ +++  +M  +G   D +TY+ L++ +CK+G+++DA+ +   
Sbjct: 436 VSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYRE 495

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M  K   PNA T+N+I   +   G V  A   Y K+ D   +    TYNI++     +  
Sbjct: 496 MFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSF 555

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  L++ + +   E +  V T+ I+I     +G   +A K +   I    L P + +Y 
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDA-KSLFSAILPSGLVPDAIIYG 614

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           +++Q     G L++ +EL   M   G TA
Sbjct: 615 LMIQSHIEEGLLEESDELFLSMEKNGCTA 643



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 191/443 (43%), Gaps = 100/443 (22%)

Query: 185 TFSILVRRYVRAGL-----------AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           TF IL+R +   GL           +  AVH     + Y C P+ +++++VI+ L ++  
Sbjct: 96  TFGILIRCFCNVGLLDFALEEESRGSRAAVHMMAD-DGYNCPPNVLSYNMVINGLFKEGE 154

Query: 234 ASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRA----------------GNISEAERVFR 276
             +A + F + L   F P+++ Y +++ G C+A                G + EA R+ +
Sbjct: 155 VDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLK 214

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT------------ 324
           +M   G+QP+V TYS++ID  C+ G+ T A ++F  M+  G  P++ T            
Sbjct: 215 KMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKG 274

Query: 325 -----------------------FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
                                  FN L+R + K    +K +  + +M++ G   + +TY 
Sbjct: 275 ALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYT 334

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF-------------------------- 395
            +ID  CK G++EDA+   + MV +G +P+  TF                          
Sbjct: 335 TVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR 394

Query: 396 ---------NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
                    N I   + K G V  AH  + ++  +  +P+ V+Y IL+  +      D  
Sbjct: 395 GIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDES 454

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +KL   M    + P+  TY  L+  YC  G  ++A    REM   K +KP +  Y ++L 
Sbjct: 455 IKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMF-SKDVKPNAITYNIILH 513

Query: 507 QLRRAGQLQKHEELVEKMVDRGF 529
            L  AG++    E   K+VD G 
Sbjct: 514 GLFHAGRVVAAREFYMKIVDSGI 536



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 154/336 (45%), Gaps = 4/336 (1%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG+V   D   HF   M S  +   + TF+ L+      G   +       M   G  P+
Sbjct: 343 AGRVE--DAVSHF-SQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPN 399

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            I  + ++  LC++ R  EA  FFD +     +PDV+ YT L+ G+C  G + E+ ++  
Sbjct: 400 AIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLG 459

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            M   G++P+  TYS +++  C+ G++  A  ++ EM     +PN+IT+N ++     A 
Sbjct: 460 RMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAG 519

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           R     + Y ++   G +    TYN ++   C++  +++A+++   +  K       TFN
Sbjct: 520 RVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFN 579

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           ++   + K+G +  A  ++  +      P+ + Y +++Q        +   +L   ME+N
Sbjct: 580 IMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKN 639

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
               N  T   ++      G    A  Y+ ++ E++
Sbjct: 640 GCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKE 675



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 2/295 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F D +    V+  V +++IL+  Y   G   E++    RM   G  PD + +S +++
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+  R  +A + +  +  K  +P+ I Y  ++ G   AG +  A   + ++  +GIQ 
Sbjct: 479 GYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            + TY+IV+  LC    +  A  +F  +     +    TFN ++   +K  R      ++
Sbjct: 539 GINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLF 598

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + +   G   D I Y  +I  H ++G LE++ ++  SM + GC  N+ T N I R + + 
Sbjct: 599 SAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEK 658

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
           GDV  A     K+ + +      T  +L+ + +  K    V K   E  ++ +EP
Sbjct: 659 GDVRRAGTYLTKIDEKEYSVEASTAVLLISIVSERKYQKEV-KFLPEKYQSFMEP 712



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 33/167 (19%)

Query: 376 AIKVLNSMVRKGCN---PNASTFNMIFRCISKLGDVN--------GAHRMYGKMKD--LK 422
           A+ + N+M + G N    +A TF ++ RC   +G ++        G+      M D    
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C PN ++YN+++         D    L  EM      PN+ TY  +I   C     + A 
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKA- 193

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                              E VLQQ+   GQL++   L++KM   G 
Sbjct: 194 -------------------EAVLQQMFDKGQLEEAVRLLKKMSGGGL 221


>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
 gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
          Length = 621

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 16/418 (3%)

Query: 120 CGVR--HGIPLLQVLS-----------FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           CGV+  H + +L+VL+           FF W   +P F H    Y+ M+ + GK RQF+ 
Sbjct: 169 CGVKLSHDL-VLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFET 227

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
               ++ M  + + +T++TF++  + +  A    +AV     M++Y         + ++ 
Sbjct: 228 MVSLLEEMAEKEL-LTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLD 286

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            L R +   EA + F+ L  +F P++  YT L+ GWCR  N+ EA +++ +M     +P+
Sbjct: 287 SLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPD 346

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           +  ++ +++ L RC + + A  +F  M   G  P+  ++  L+R   K ++ ++ +Q + 
Sbjct: 347 IVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFE 406

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+  GC  D   Y  LI       +++    +L  M   GC P+  T+N + + ++   
Sbjct: 407 EMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKR 466

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
             + A R+Y KM +   +P T TY+++M+ +  +++ +M +    EM+     P+ N+Y 
Sbjct: 467 MPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYT 526

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           + I     +G    A KY+ EMI EK +K     Y        RAG+    EEL +KM
Sbjct: 527 VFIGGLISLGRCAEAGKYLEEMI-EKGMKAPQLDYNKFAADFSRAGRPDILEELAQKM 583



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/243 (19%), Positives = 93/243 (38%), Gaps = 38/243 (15%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+      L G +R  +   A    ++MK++     V +++ILVR + +     EAV  
Sbjct: 345 PDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQY 404

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-------------------- 245
           F  M+  GC PD   ++ +I+    ++R          +K                    
Sbjct: 405 FEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTN 464

Query: 246 ----------------DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                           +  +P    Y+ +++ + +  N       + EMK+ G  P+  +
Sbjct: 465 KRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNS 524

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y++ I  L   G+   A     EM+E G +   + +N       +A R + + ++  +MK
Sbjct: 525 YTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMK 584

Query: 350 RLG 352
             G
Sbjct: 585 FSG 587


>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Glycine max]
          Length = 622

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 198/407 (48%), Gaps = 17/407 (4%)

Query: 133 SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI--------DLMKSRNVEITVD 184
           S F W   RP F   P L+  ++N   K R+FD AW  +        +    +   ++V 
Sbjct: 143 SLFLWAQTRPAFRPGPKLFDAVVNALAKAREFDAAWKLVLHHAEKDGEEEGEKERLVSVG 202

Query: 185 TFSILVRRYVRAGLAAEAVHAF----NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
           TF+I++RRY RAG++  A+  +    N         +     I++  LC++    EA  +
Sbjct: 203 TFAIMIRRYARAGMSKLAIRTYEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASEY 262

Query: 241 F---DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           F     L   + P + VY  ++ GW R   + + ER++ EMK   ++P V TY  +++  
Sbjct: 263 FLWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGERLWAEMK-ENMRPTVVTYGTLVEGY 321

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           CR  ++ +A ++  +M + G  PN+I +N ++    +A R ++ L +  +   L      
Sbjct: 322 CRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTD 381

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TYN L+   CK G L  A K+L  M+ +G  P+A+T+N  FR  S+   +     +Y K
Sbjct: 382 STYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTK 441

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           +      P+ +TY++L++M    +  D+ +++ KEM  N  + ++ T  +L+ + C +  
Sbjct: 442 LIQSGYTPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRR 501

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              A+    +MI  + + P    ++ +   L++ G  +  ++L + M
Sbjct: 502 LEEAFVEFEDMI-RRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLM 547



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 2/284 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           +V S  +Y+ M+N   ++R+          MK  N+  TV T+  LV  Y R     +A+
Sbjct: 273 WVPSIRVYNIMLNGWFRLRKLKQGERLWAEMKE-NMRPTVVTYGTLVEGYCRMRRVEKAL 331

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
                M + G AP+ I ++ +I  L    R  EA    +     +  P    Y +LV+G+
Sbjct: 332 EMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGF 391

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+AG++  A ++ + M   G  P+  TY+       RC +I    +++ ++++ G  P+ 
Sbjct: 392 CKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDR 451

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T++ L+++  +  + +  +QV  +M+  G + D  T   L+   CK  +LE+A      
Sbjct: 452 LTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFED 511

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           M+R+G  P   TF  +   + K G    A ++   M  +   PN
Sbjct: 512 MIRRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMSSVPYSPN 555



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 3/286 (1%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           ++  ++I++  + R     +    +  M+E    P  + +  ++   CR RR  +A    
Sbjct: 276 SIRVYNIMLNGWFRLRKLKQGERLWAEMKE-NMRPTVVTYGTLVEGYCRMRRVEKALEMV 334

Query: 242 -DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            D  K+   P+ IVY  ++     AG   EA  +     +  I P   TY+ ++   C+ 
Sbjct: 335 GDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCKA 394

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G +  A  +   M+  G  P++ T+N   R   +  + E+ + +Y ++ + G   D +TY
Sbjct: 395 GDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDRLTY 454

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + L+   C++ KL+ A++V   M   G + + +T  M+   + K+  +  A   +  M  
Sbjct: 455 HLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFEDMIR 514

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV-NTY 465
               P  +T+  +         T+M  KL K M      PN+ NTY
Sbjct: 515 RGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMSSVPYSPNLPNTY 560



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/212 (19%), Positives = 93/212 (43%), Gaps = 8/212 (3%)

Query: 324 TFNNLMRVHVKASRTEKVLQVY----NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK- 378
           TF  ++R + +A  ++  ++ Y    N    +   ++      L+D  CK+G + +A + 
Sbjct: 203 TFAIMIRRYARAGMSKLAIRTYEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASEY 262

Query: 379 -VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            +    +     P+   +N++     +L  +    R++ +MK+    P  VTY  L++ +
Sbjct: 263 FLWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGERLWAEMKE-NMRPTVVTYGTLVEGY 321

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
              +  +  L++  +M +  + PN   Y  +I      G +  A   + E      + P 
Sbjct: 322 CRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGML-ERFHVLEIGPT 380

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            S Y  +++   +AG L    ++++ M+ RGF
Sbjct: 381 DSTYNSLVKGFCKAGDLVGASKILKMMISRGF 412


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 181/351 (51%), Gaps = 2/351 (0%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           E T  T+  LV  Y RAGL  +A      M  +  A    A + +I  LC + R ++A  
Sbjct: 125 EATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALV 184

Query: 240 FFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
             D  L     PDV+ Y  L++  C+     +A  +   M+  G +PN  TY+++IDA+C
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           R G + +A ++   +   GC+PN++ +N +++      R     ++ ++M R  C  +  
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           T N +I+  C+ G L+     L  M + GC  N  T+N +   + + G+V+ A  +   M
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           +   C+P+ VTYN +++   ++   +   +L  +M +N+  P+ +T+  +I+ +C  G  
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             A++  ++M E+ C  P S+ Y  ++  L +AG++++  EL+ +M ++GF
Sbjct: 425 LQAFEVFKQMPEKGC-NPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGF 474



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 192/432 (44%), Gaps = 41/432 (9%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           V A   + H+P L H +    G+V     A   +D M  R     V T++IL++   +  
Sbjct: 158 VQASSAYAHNP-LIHALCE-RGRVAD---ALVVLDGMLCRGCAPDVVTYNILLQAACKGR 212

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYT 256
              +A+   + M   GC P+ + ++++I  +CR+    +A+   +SL  +  +P+ + Y 
Sbjct: 213 GYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYN 272

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            +++G+C      +A+ +  EM      PN  T +++I+ LCR G + +      +M + 
Sbjct: 273 TVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKH 332

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           GC  N +T+N ++    +    +  L++ + M+  GC+ D +TYN ++   C   + EDA
Sbjct: 333 GCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDA 392

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            +++  M +    P+ STFN I     + G +  A  ++ +M +  C PN+ TY+ ++  
Sbjct: 393 EELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGG 452

Query: 437 FATSKSTDMVLKLKKEM----------------------------------EENEVEPNV 462
              +   +  L+L  EM                                  +++ + P  
Sbjct: 453 LTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQT 512

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
             Y  ++   C  G  + A   + +M+   C+ P  S Y ++++ L   G  ++  EL+ 
Sbjct: 513 VLYNTVLLGLCRNGKTDYAIDVLADMVSCGCM-PDESTYIILIEGLFYEGYSKEARELLS 571

Query: 523 KMVDRGFTARPL 534
           ++  R   +  L
Sbjct: 572 RLCSRDVLSNSL 583



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 6/284 (2%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PDV +   LVR  CR G  ++A RV   ++  G +    TY  ++D  CR G +  A  V
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARV---VEACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M       ++   N L+    +  R    L V + M   GC  D +TYN L+   CK
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
                 A+++++ M  +GC PN  T+N+I   + + GDV+ A  +   +    C+PNTV 
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN +++ F + +      ++  EM      PN  T  ++I   C  G       Y+ +M 
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +  C       Y  V+  +   G +    EL+  M  + F  +P
Sbjct: 331 KHGC-TANVVTYNAVISGMCEQGNVDSALELLSNM--QSFGCKP 371



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 94/254 (37%), Gaps = 39/254 (15%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   VI   C   +    L++LS       +P+ V     Y+ ++       +++ A   
Sbjct: 340 TYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVT----YNTVLKGLCSADRWEDAEEL 395

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +  M   +      TF+ ++  + + GL  +A   F +M E GC P+   +S +I  L +
Sbjct: 396 MIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTK 455

Query: 231 KRRASEAQSFFDSL--------------------KDKFE---------------PDVIVY 255
             +  +A    + +                    +DK E               P  ++Y
Sbjct: 456 AGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLY 515

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
             ++ G CR G    A  V  +M   G  P+  TY I+I+ L   G    A ++ + +  
Sbjct: 516 NTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCS 575

Query: 316 VGCEPNSITFNNLM 329
                NS+  N  +
Sbjct: 576 RDVLSNSLIKNEAL 589


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 2/368 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q  LA   +  M     E    T   LV  + R    ++AV   ++M E G  PD +A++
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC+ +R ++A  FF  ++ K   P+V+ YT LV G C +   S+A R+  +M   
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            I PNV TYS ++DA  + G++  A ++F EM+ +  +P+ +T+++L+       R ++ 
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            Q+++ M   GC AD ++YN LI+  CK  ++ED +K+   M ++G   N  T+N + + 
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             + GDV+ A   + +M      P+  TYNIL+     +   +  L + ++M++ E++ +
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           + TY  +I   C  G    A+     +   K LKP    Y  ++  L   G L + E L 
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 522 EKMVDRGF 529
            KM   G 
Sbjct: 494 TKMKQEGL 501



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 141 RPEFVHSPDLYHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           RP  V     Y  ++N L    R  D A    D++K + +   V T+S L+  +V+ G  
Sbjct: 222 RPNVVT----YTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKV 276

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
            EA   F  M      PD + +S +I+ LC   R  EA   FD +  K    DV+ Y  L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+C+A  + +  ++FREM   G+  N  TY+ +I    + G + +A + F++M   G 
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+  T+N L+         EK L ++  M++   + D +TY  +I   CK GK+E+A  
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +  S+  KG  P+  T+  +   +   G ++    +Y KMK
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 141/292 (48%), Gaps = 1/292 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D +K +  P ++ +  L+    +         + ++M++ GI+ ++YT++IVI+  C 
Sbjct: 73  FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C Q++ A  +  +ML++G EP+ +T  +L+    + +R    + + ++M  +G + D + 
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN +ID  CK  ++ DA      + RKG  PN  T+  +   +      + A R+   M 
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K  PN +TY+ L+  F  +       +L +EM    ++P++ TY  LI   C     +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            A +    M+ + CL    S Y  ++    +A +++   +L  +M  RG  +
Sbjct: 313 EANQMFDLMVSKGCLADVVS-YNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 115/224 (51%), Gaps = 1/224 (0%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A D+F++M++    P+ + FN L+   VK  + + V+ +  +M+ LG   D  T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+C C   ++  A+ +L  M++ G  P+  T   +     +   V+ A  +  KM ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +P+ V YN ++     +K  +      KE+E   + PNV TY  L+   C    W++A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            + + +MI++K + P    Y  +L    + G++ + +EL E+MV
Sbjct: 245 ARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 186/375 (49%), Gaps = 3/375 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   KV  FD A+  +  M+ +  +     +S ++    +     EA     +M 
Sbjct: 48  YGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA 107

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
            Y   PD + +  ++  LC+ +R  +A +  + +  +  +PD  +Y  ++ G C+   + 
Sbjct: 108 RYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 166

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +F +M    I PNV TY+ +I+ LC+  +I  A+++F EM   G  P  +++N L+
Sbjct: 167 EARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 226

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K         V+++M R  C  + +TY  LID   K GK++ A +VL+ MV+KG  
Sbjct: 227 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 286

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN +T++ +     K+  V+ AH++  +M      P  VTYNIL+     +   +   KL
Sbjct: 287 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 346

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M +    P V TY  L+   C     + A++   EMI + C  P +  Y+ +   L 
Sbjct: 347 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC-PPDAITYDTLAWGLT 405

Query: 510 RAGQLQKHEELVEKM 524
           RAG++ + +EL+EKM
Sbjct: 406 RAGKVHEAQELMEKM 420



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 1/343 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           + IL+    + G   EA    + M         IA+S +I+ LC+  R  EA+   + + 
Sbjct: 48  YGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA 107

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               PD + Y  +V   C+   I +A     EM   GI+P+ + Y+ V+  LC+  ++  
Sbjct: 108 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 167

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +F +M++    PN +T+N L+    KA R E   +++ +M   G     ++YN LID
Sbjct: 168 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 227

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK   L  A  V + MVR  C PN  T+  +   +SK G V  A  +   M      P
Sbjct: 228 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 287

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N  TY+ L+  F   +  D   KL ++M    + P V TY IL+   C      +A+K  
Sbjct: 288 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           R M + +C  P    Y  +L+ L    QL     L  +M+ +G
Sbjct: 348 RGMAQRRC-HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 37/346 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   K+ + + A   I+ M +R       T+  +V R  +     +A+     M 
Sbjct: 83  YSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMA 141

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   ++ V+S LC++ +  EA+  F+ + K +  P+V+ Y  L+ G C+A  I 
Sbjct: 142 TRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIE 201

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F+EM   G  P   +Y+ +ID  C+   +  A DVF +M+   C PN +T+  L+
Sbjct: 202 TAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 261

Query: 330 RVHVKASRTEKVLQVYNQMKRLG---------CEAD------------------------ 356
               K+ + +   +V + M + G         C  D                        
Sbjct: 262 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 321

Query: 357 --TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
              +TYN L++  C+  KLEDA K+   M ++ C+P   T+N + R +     ++GAHR+
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
           Y +M    C P+ +TY+ L      +       +L ++M+  +  P
Sbjct: 382 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 3/355 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R V     TF+ +   + +AG   +    +  M E G       + I+IS LC+   
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 234 ASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA     +++  +F+   I Y+ ++   C+   + EA  +  +M      P+  TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++ LC+  +I  A     EM   G +P++  +N ++    +  + E+   ++ +M +  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + +TYN LI+  CK  ++E A ++   M  KG  P   ++N +     K  D+  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++ KM    C PN VTY  L+   + S       ++   M +  V PNV TY  LI  +
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           C +   + A+K + +M+ +  + P    Y ++L  L RA +L+   +L   M  R
Sbjct: 300 CKVRRVDEAHKLLEQMVTQG-IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 353


>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
 gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
          Length = 433

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FFNWV+       S  +Y+E++++ G++R+F+     +D M  R   +  DT+ +LV RY
Sbjct: 23  FFNWVSKEGTISLSSCVYNEILDILGRMRRFEELTLVLDEMSKREGFVDEDTYRVLVNRY 82

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             A +  EA+ AFN+  E G   D ++F  ++  LCR +    A++   S   +F  D+ 
Sbjct: 83  AGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYLCRYKHVDVAETLLHSKGHEFGVDIK 142

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
               ++ GWC  GN+ EA+R ++++  +  +P+V+TY   I AL   G++  A  ++  M
Sbjct: 143 TMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTYGTFIKALTNKGKLGTAMKLYEAM 202

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            ++ C+P+ +  N ++       R  + L V+  MK  GC  +  TYN LI   CK G++
Sbjct: 203 WKMQCKPDVVICNCVIDALCFKKRVPEALAVFEGMKERGCIPNVATYNSLIKHMCKIGRM 262

Query: 374 EDAIKVLNSMVRK--GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           E   ++L+ M  K   C P+  TFN + + + K  +V G   +  +MK   C+ N  T N
Sbjct: 263 EKVYELLDEMQEKKGSCMPDEITFNYLLKSLKKPEEVAG---VLERMKINGCKMNNDTCN 319

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           +L+++ A   S + V    +EME+N +  +  +Y I+I      G   +A +Y  EM E 
Sbjct: 320 LLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIMIHWLYDKGRVEDALRYFGEM-EN 378

Query: 492 KCLKP 496
           K + P
Sbjct: 379 KGMVP 383



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 9/239 (3%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           G VR+    W   D++ S+  +  V T+   ++     G    A+  +  M +  C PD 
Sbjct: 155 GNVREAKRFWK--DIIASK-CKPDVFTYGTFIKALTNKGKLGTAMKLYEAMWKMQCKPDV 211

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           +  + VI  LC K+R  EA + F+ +K++   P+V  Y +L++  C+ G + +   +  E
Sbjct: 212 VICNCVIDALCFKKRVPEALAVFEGMKERGCIPNVATYNSLIKHMCKIGRMEKVYELLDE 271

Query: 278 M--KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           M  K     P+  T++ ++ +L +  ++     V   M   GC+ N+ T N L+++H   
Sbjct: 272 MQEKKGSCMPDEITFNYLLKSLKKPEEVA---GVLERMKINGCKMNNDTCNLLLKLHADW 328

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
              EKV   + +M++ G   D  +Y  +I      G++EDA++    M  KG  P   T
Sbjct: 329 DSEEKVRYTWEEMEKNGLGLDRRSYTIMIHWLYDKGRVEDALRYFGEMENKGMVPEPRT 387



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 110/247 (44%), Gaps = 6/247 (2%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ ++D L R  +      V  EM +     +  T+  L+  +  A   E+ +  +N+ 
Sbjct: 39  VYNEILDILGRMRRFEELTLVLDEMSKREGFVDEDTYRVLVNRYAGAHMVEEAIGAFNKR 98

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRCISKLG 406
           + LG E D +++  L+   C+   ++ A  +L+S   KG     +  T N++      LG
Sbjct: 99  RELGLELDLVSFQKLLMYLCRYKHVDVAETLLHS---KGHEFGVDIKTMNIVLNGWCVLG 155

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +V  A R +  +   KC+P+  TY   ++           +KL + M + + +P+V    
Sbjct: 156 NVREAKRFWKDIIASKCKPDVFTYGTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICN 215

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C       A      M E  C+ P  + Y  +++ + + G+++K  EL+++M +
Sbjct: 216 CVIDALCFKKRVPEALAVFEGMKERGCI-PNVATYNSLIKHMCKIGRMEKVYELLDEMQE 274

Query: 527 RGFTARP 533
           +  +  P
Sbjct: 275 KKGSCMP 281


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 2/368 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q  LA   +  M     E    T   LV  + R    ++AV   ++M E G  PD +A++
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC+ +R ++A  FF  ++ K   P+V+ YT LV G C +   S+A R+  +M   
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            I PNV TYS ++DA  + G++  A ++F EM+ +  +P+ +T+++L+       R ++ 
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEA 314

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            Q+++ M   GC AD ++YN LI+  CK  ++ED +K+   M ++G   N  T+N + + 
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             + GDV+ A   + +M      P+  TYNIL+     +   +  L + ++M++ E++ +
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           + TY  +I   C  G    A+     +   K LKP    Y  ++  L   G L + E L 
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 522 EKMVDRGF 529
            KM   G 
Sbjct: 494 TKMKQEGL 501



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 141 RPEFVHSPDLYHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           RP  V     Y  ++N L    R  D A    D++K + +   V T+S L+  +V+ G  
Sbjct: 222 RPNVVT----YTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKV 276

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
            EA   F  M      PD + +S +++ LC   R  EA   FD +  K    DV+ Y  L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+C+A  + +  ++FREM   G+  N  TY+ +I    + G + +A + F++M   G 
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+  T+N L+         EK L ++  M++   + D +TY  +I   CK GK+E+A  
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +  S+  KG  P+  T+  +   +   G ++    +Y KMK
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 141/292 (48%), Gaps = 1/292 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D +K +  P ++ +  L+    +         + ++M++ GI+ ++YT++IVI+  C 
Sbjct: 73  FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C Q++ A  +  +ML++G EP+ +T  +L+    + +R    + + ++M  +G + D + 
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN +ID  CK  ++ DA      + RKG  PN  T+  +   +      + A R+   M 
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K  PN +TY+ L+  F  +       +L +EM    ++P++ TY  L+   C     +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            A +    M+ + CL    S Y  ++    +A +++   +L  +M  RG  +
Sbjct: 313 EANQMFDLMVSKGCLADVVS-YNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 115/224 (51%), Gaps = 1/224 (0%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A D+F++M++    P+ + FN L+   VK  + + V+ +  +M+ LG   D  T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+C C   ++  A+ +L  M++ G  P+  T   +     +   V+ A  +  KM ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +P+ V YN ++     +K  +      KE+E   + PNV TY  L+   C    W++A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            + + +MI++K + P    Y  +L    + G++ + +EL E+MV
Sbjct: 245 ARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 195/435 (44%), Gaps = 49/435 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV     Y ++I    +  + + A+     MKS  V   V T++IL+  + + GL  
Sbjct: 448 RKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIE 507

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A   F+ ME  GC+P  + ++ ++    + ++  +A   F  + D    P+ I Y+ LV
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALV 567

Query: 260 RGWCRAGNISEAERVFREM----------------KMAGIQPNVYTYSIVIDALCRCGQI 303
            G C+AG   +A  V+ +M                    I PNV TY  +ID LC+  ++
Sbjct: 568 DGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKV 627

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A ++   M   GCEPN I ++ L+    K  + +   +V+ +M + G      TY  L
Sbjct: 628 VDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSL 687

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID   KD +L+ AIKVL+ M+   C PN  T+  +   + ++G+   A ++   M+   C
Sbjct: 688 IDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGC 747

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN VTY  L+     S   DM L+L  +M      PN  TYR+LI   C  G  + A+ 
Sbjct: 748 NPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHS 807

Query: 484 YIREM--------------------------------IEEKCLKPGSSVYEMVLQQLRRA 511
            + EM                                +E   +   + VY +++    +A
Sbjct: 808 LLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKA 867

Query: 512 GQLQKHEELVEKMVD 526
           G+L+K  EL ++M++
Sbjct: 868 GRLEKALELHKEMME 882



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/467 (23%), Positives = 188/467 (40%), Gaps = 96/467 (20%)

Query: 157 LAGKVRQFDLAW--HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           LAG +++  L W    I +M +         F+ LV  Y  A     A    NRM   GC
Sbjct: 316 LAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGC 375

Query: 215 APDKIAFSIVISILCRKR----------------------------------RASEAQSF 240
            P  + ++I I  +C                                     R       
Sbjct: 376 PPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 435

Query: 241 FDS--------LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           FD         ++  F PD   Y+ ++   C A  + +A  +F+EMK  G+ P+VYTY+I
Sbjct: 436 FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTI 495

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID+ C+ G I +A   F EM  VGC P+ +T+  L+  ++K  +  +   ++++M   G
Sbjct: 496 LIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAG 555

Query: 353 CEADTITYNFLIDCHCKDG----------------------------------------- 371
           C  +TITY+ L+D  CK G                                         
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615

Query: 372 ----------KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
                     K+ DA ++L+ M   GC PN   ++ +     K+G ++ A  ++ +M   
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P   TY  L+      +  D+ +K+  +M E+   PNV TY  +I   C +G    A
Sbjct: 676 GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            K +  M+E++   P    Y  ++  L ++G++    +L  +M+ +G
Sbjct: 736 LKLL-SMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 142/350 (40%), Gaps = 9/350 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ LV+    AG           M E G   DK         LC++ R S+A    +  
Sbjct: 209 TYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIE-- 266

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           ++ F+ D ++ T ++ G   A    EA      M+     PNV TY  ++    +  Q+ 
Sbjct: 267 REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLG 326

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
               + + M+  GC PN   FN+L+  +  A       ++ N+M   GC    + YN  I
Sbjct: 327 WCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFI 386

Query: 365 DCHCKDGKLED------AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
              C   +L        A KV   M+   C  N        RC+  +G  + A ++   M
Sbjct: 387 GSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLM 446

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
                 P+T TY+ ++     +   +    L +EM+   V P+V TY ILI  +C +G  
Sbjct: 447 MRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLI 506

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             A  +  EM    C  P    Y  +L    +  Q+ +  ++  +MVD G
Sbjct: 507 EQARSWFDEMESVGC-SPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAG 555



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 145/354 (40%), Gaps = 43/354 (12%)

Query: 106 SISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ 163
           SI+P+ V +  +I+  C     +   ++L   +     P  +    +Y  +I+   KV +
Sbjct: 606 SIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHI----IYDALIDGFCKVGK 661

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            D A      M       TV T++ L+    +      A+   ++M E  C P+ + ++ 
Sbjct: 662 LDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTA 721

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I  LCR     +A      + K    P+V+ YT+L+ G  ++G +  + ++F +M   G
Sbjct: 722 MIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-------------------------- 316
             PN  TY ++I+  C  G +  AH + +EM +                           
Sbjct: 782 CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGL 841

Query: 317 -------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI---TYNFLIDC 366
                  G    +  +  L+    KA R EK L+++ +M  +    +     TY  LI  
Sbjct: 842 LEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQA 901

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
            C   +LE A ++ + + RKG  P  S F  + + + K+   N A ++   M D
Sbjct: 902 LCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCD 955



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 41/310 (13%)

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE-- 315
           +VR  CR G  ++A      +K  G +P+  TY+ ++  L   GQ+     V  EM E  
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237

Query: 316 -------VGC-----------------------EPNSITFNNLMRVHVKASRTEKVLQVY 345
                  VGC                       + +++    ++   ++AS  ++ +   
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFL 297

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M+   C  + +TY  L+    K  +L    ++++ M+ +GCNPN S FN +       
Sbjct: 298 HRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNA 357

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK---STDMVLKLKKEMEE----NEV 458
            D   A+++  +M    C P  V YNI +    + +   S D++   +K  EE    + V
Sbjct: 358 RDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCV 417

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
              VNT      + CGMG ++ A++ I+ M+  K   P +S Y  V+  L  A +++K  
Sbjct: 418 LNKVNTANFARCL-CGMGKFDKAFQIIKLMM-RKGFVPDTSTYSKVITFLCEAMKVEKAF 475

Query: 519 ELVEKMVDRG 528
            L ++M   G
Sbjct: 476 LLFQEMKSVG 485



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 10/249 (4%)

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           ER+ RE+     +      ++++   CR G   +A +    + + G  P+  T+N L++V
Sbjct: 157 ERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQV 216

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
              A + +   +V  +M  LG   D  T        CK+G+  DA+ ++    R+    +
Sbjct: 217 LATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIE---REDFKLD 273

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
                 +   + +    + A     +M+   C PN VTY  L+  F   K      ++  
Sbjct: 274 TVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIIS 333

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M      PN + +  L+  YC    +  AYK +  M    C  PG  VY + +      
Sbjct: 334 MMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGC-PPGYVVYNIFI------ 386

Query: 512 GQLQKHEEL 520
           G +   EEL
Sbjct: 387 GSICSGEEL 395



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 4/130 (3%)

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
            N+I R   + G    A    G++KD    P+  TYN L+Q+ AT+   DM  +++KEM 
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           E     +  T        C  G W++A      MIE +  K  + +   ++  L  A   
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDALV----MIEREDFKLDTVLCTQMISGLMEASLF 290

Query: 515 QKHEELVEKM 524
            +    + +M
Sbjct: 291 DEAISFLHRM 300


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 187/397 (47%), Gaps = 34/397 (8%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  R  + +V T+++L+    ++    +A+   + M   GC P+ + ++++I+
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            +CR+ R  +A+   + L    F+PD + YT +++G C A    + E +F EM      P
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVP 275

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  T+ +++   CR G + RA +V   M E GC  N+   N ++    K  R +   +  
Sbjct: 276 NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M   GC  DTI+Y  ++   C+ G+ EDA ++LN MVRK C PN  TFN     + + 
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQK 395

Query: 406 GDVNGAHRMYGKMKD--------------------------------LKCEPNTVTYNIL 433
           G ++ A  +  +M +                                L CEPNT+TY  L
Sbjct: 396 GLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTL 455

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +     ++  D   +L  EM +N+   NV T+ +L++ +C  G    A + +++M+E  C
Sbjct: 456 LTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGC 515

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             P    +  +L  +      ++  EL+  +V +G +
Sbjct: 516 -TPNLITFNTLLDGITEDCNSEEALELLHGLVSKGIS 551



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 165/342 (48%), Gaps = 5/342 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+R     G   +A+   + M    C P  + +++++  +C+     +A    D +
Sbjct: 139 TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM 198

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + K   P+++ Y  ++ G CR   + +A ++   +   G QP+  +Y+ V+  LC   + 
Sbjct: 199 RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRW 258

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +F EM+E  C PN +TF+ L+R   +    E+ ++V ++M   GC A+T   N +
Sbjct: 259 EDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIV 318

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK G+++DA + LN+M   GC+P+  ++  + + + + G    A  +  +M    C
Sbjct: 319 INSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNC 378

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN VT+N  + +       D  + L ++M E      + TY  L+  +C  G  ++A +
Sbjct: 379 PPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALE 438

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
               +  E    P +  Y  +L  L  A +L    EL+ +M+
Sbjct: 439 LFNSLPCE----PNTITYTTLLTGLCHAERLDAAAELLAEMM 476



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 169/337 (50%), Gaps = 5/337 (1%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +RR +     AEA     R    G APD    + +I  LCR+ R S+A     + +    
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 250 P-DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           P DV  Y  LV G+CR G +  A R+   M    + P+ YTY+ +I  LC  G++  A  
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  +ML   C+P+ +T+  L+    K+S   + ++V ++M+  GC  + +TYN +I+  C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++ +++DA ++LN +   G  P+  ++  + + +           ++ +M +  C PN V
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+++L++ F      +  +++   M E+    N     I+I   C  G  ++A++++  M
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
               C  P +  Y  VL+ L RAG+ +  +EL+ +MV
Sbjct: 339 GSYGC-SPDTISYTTVLKGLCRAGRWEDAKELLNEMV 374



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 192/412 (46%), Gaps = 35/412 (8%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L    R  D+   F +++++  V   V TF +LVR + R G+   A+   +RM E+GC 
Sbjct: 251 GLCAAKRWEDVEVLFCEMVENNCVPNEV-TFDMLVRFFCRGGMVERAIEVLDRMSEHGCT 309

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
            +    +IVI+ +C++ R  +A  F +++      PD I YT +++G CRAG   +A+ +
Sbjct: 310 ANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKEL 369

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC---------------- 318
             EM      PN  T++  I  LC+ G I +A  +  +M E GC                
Sbjct: 370 LNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCV 429

Query: 319 ----------------EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
                           EPN+IT+  L+     A R +   ++  +M +  C  + +T+N 
Sbjct: 430 QGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+   C+ G +E+AI+++  M+  GC PN  TFN +   I++  +   A  +   +    
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
              +T+TY+ ++ + +     +  +++   +++  + P    Y  +++  C     + A 
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAI 609

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            +   M+   C+ P  S Y ++++ L R G L++   ++ ++  RG  ++ L
Sbjct: 610 DFFAHMVSNSCM-PNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSL 660



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 3/362 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   ++   SR     V   + L+R   R G  ++A       E  G   D  A++ +++
Sbjct: 54  AARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVA 113

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
             CR  R   A+    S+     PD   YT L+RG C  G + +A  +  +M     QP+
Sbjct: 114 GYCRYGRLDAARRLIASM--PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPS 171

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           V TY+++++A+C+     +A  V  EM   GC PN +T+N ++    +  R +   Q+ N
Sbjct: 172 VVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILN 231

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           ++   G + DT++Y  ++   C   + ED   +   MV   C PN  TF+M+ R   + G
Sbjct: 232 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGG 291

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V  A  +  +M +  C  NT   NI++         D   +    M      P+  +Y 
Sbjct: 292 MVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYT 351

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++   C  G W +A + + EM+ + C  P    +   +  L + G + +   L+E+M +
Sbjct: 352 TVLKGLCRAGRWEDAKELLNEMVRKNC-PPNEVTFNTFICILCQKGLIDQAILLIEQMPE 410

Query: 527 RG 528
            G
Sbjct: 411 YG 412



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 160/336 (47%), Gaps = 4/336 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN   K  + D A+ F++ M S        +++ +++   RAG   +A    N M    
Sbjct: 318 VINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKN 377

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P+++ F+  I ILC+K    +A    + + +      ++ Y  LV G+C  G +  A 
Sbjct: 378 CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSAL 437

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F  +     +PN  TY+ ++  LC   ++  A ++ AEM++  C  N +TFN L+   
Sbjct: 438 ELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFF 494

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +    E+ +++  QM   GC  + IT+N L+D   +D   E+A+++L+ +V KG + + 
Sbjct: 495 CQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDT 554

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T++ I   +S+   +  A +M+  ++D+   P  V YN ++        TD  +     
Sbjct: 555 ITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAH 614

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           M  N   PN +TY ILI      G    A   + E+
Sbjct: 615 MVSNSCMPNESTYVILIEGLAREGLLKEARYVLSEL 650



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 4/306 (1%)

Query: 135 FNWVTARPEFVHSPDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F ++     +  SPD       L G  R  +++ A   ++ M  +N      TF+  +  
Sbjct: 332 FEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICI 391

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
             + GL  +A+    +M EYGC+   + ++ +++  C + R   A   F+SL    EP+ 
Sbjct: 392 LCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP--CEPNT 449

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I YT L+ G C A  +  A  +  EM       NV T+++++   C+ G +  A ++  +
Sbjct: 450 ITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQ 509

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M+E GC PN ITFN L+    +   +E+ L++ + +   G   DTITY+ ++D   ++ +
Sbjct: 510 MMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDR 569

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +E+A+++ +++   G  P A  +N I   + K  + + A   +  M    C PN  TY I
Sbjct: 570 IEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVI 629

Query: 433 LMQMFA 438
           L++  A
Sbjct: 630 LIEGLA 635



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 4/265 (1%)

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
           +++EA R+       G  P+VY  + +I  LCR G+ + A  V       G   +   +N
Sbjct: 50  DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYN 109

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+  + +  R +   ++   M       D  TY  LI   C  G++ DA+ +L+ M+R+
Sbjct: 110 TLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRR 166

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
            C P+  T+ ++   + K      A ++  +M+   C PN VTYN+++         D  
Sbjct: 167 ECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA 226

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            ++   +     +P+  +Y  ++   C    W +      EM+E  C+ P    ++M+++
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV-PNEVTFDMLVR 285

Query: 507 QLRRAGQLQKHEELVEKMVDRGFTA 531
              R G +++  E++++M + G TA
Sbjct: 286 FFCRGGMVERAIEVLDRMSEHGCTA 310


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 223/480 (46%), Gaps = 47/480 (9%)

Query: 86  NPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFV 145
             D T+   SLGF  +     I+ +T+      +  V   + LL+V+        + E +
Sbjct: 511 GADRTVEYPSLGFKSLG---EITYNTLMSAFIHNGHVDEAVKLLEVMK-------KHECI 560

Query: 146 HSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            +   Y  +++  GK  + D A   +  M+ +  E +V T+S L+  + +     E++  
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------ 247
           F+ M   GC  D   +S+VI+ LC+     +A   F  +K++                  
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680

Query: 248 ------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                               PD  VY  +V G  ++  + EA ++   MK   I P+++T
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ ++D L + G++  A ++F +M E G EP+ + + +LM V  K  +    L ++  M 
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           +  C  D +TY+ LID   K+G++E+A     + + KGC PN   ++ +     K G V+
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++ +M+  +C PN VTYN L+   A +   ++  KL +EME+    P++ TY ILI
Sbjct: 861 RALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILI 920

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                MG  + A  Y + M +EK + P    +  +++ L +  +L +  EL + M + G+
Sbjct: 921 DGVGKMGMVDEAESYFKRM-KEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGY 979



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 189/427 (44%), Gaps = 33/427 (7%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +  + H+   Y  MI      ++ D     +  M      I++   + L+R +
Sbjct: 168 FFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTF 227

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
                 + A+  FN+M+ +GC P    ++ V+ +L +      A   F  L   + +PD 
Sbjct: 228 GSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDA 287

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +   V  + R+G +  A    +EM  +GI P V+T++++IDAL + G I  A   F  
Sbjct: 288 QTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNG 347

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M  + C PN +T+  L+    KA R E+  +V+ +MK   C  D I YN LID   K G+
Sbjct: 348 MKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGE 407

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            + A  +   M  +G  PN  T+N++   + K G    A +++  +K+    P+  TYN 
Sbjct: 408 ADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNT 467

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVE------------------------PNVN----- 463
           L+ +       D VL + KEM E   E                        P++      
Sbjct: 468 LIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLG 527

Query: 464 --TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             TY  L++ +   GH + A K +  M + +C+ P    Y  ++  L +AG+L +   L+
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECI-PTVVTYTTLVDGLGKAGRLDEAVSLL 586

Query: 522 EKMVDRG 528
            +M  +G
Sbjct: 587 REMEKQG 593



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 182/408 (44%), Gaps = 38/408 (9%)

Query: 133 SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           + +N+V    E +     YH  + + GK+ QF              ++    TF I V  
Sbjct: 253 NMYNFVL---ELLVKGGFYHSAVIVFGKLGQF-------------RIQPDAQTFRIFVHS 296

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPD 251
           + R+G    A      M + G  P    F+++I  L +     EA  FF+ +K+ +  P+
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           V+ YT LV G  +AG + EA  VF EMK     P+   Y+ +ID L + G+   A  +F 
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM + G  PN  T+N ++ V  KA R  +  Q+++ +K  G   D  TYN LID   K G
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE------- 424
           +++  + ++  MV KG             CI    D N  H    +  D   E       
Sbjct: 477 QMDKVLAIIKEMVEKGG-----------ECIISR-DSNAGHEGTIEGADRTVEYPSLGFK 524

Query: 425 -PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
               +TYN LM  F  +   D  +KL + M+++E  P V TY  L+      G  + A  
Sbjct: 525 SLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVS 584

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            +REM ++ C +P    Y  ++    +  Q ++   L ++MV +G  A
Sbjct: 585 LLREMEKQGC-EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVA 631



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 165/324 (50%), Gaps = 3/324 (0%)

Query: 148  PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            PD  +Y+ M+N   K  + D A   +D MK++N+   + T++ L+    ++G   EA + 
Sbjct: 701  PDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNM 760

Query: 206  FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
            F +M E G  PD +A++ ++ +L +  + S A   F ++ K +  PDV+ Y++L+    +
Sbjct: 761  FTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGK 820

Query: 265  AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             G + EA   F      G  PNV  YS +ID+  + G + RA ++F EM    C PN +T
Sbjct: 821  EGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVT 880

Query: 325  FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            +NNL+    KA R     ++  +M+++GC  D +TYN LID   K G +++A      M 
Sbjct: 881  YNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMK 940

Query: 385  RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             KG  P+  TF  +   + K+  +  A  ++  M++    P+ VTYN+L+ +   +    
Sbjct: 941  EKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVH 1000

Query: 445  MVLKLKKEMEENEVEPNVNTYRIL 468
                +  EM+     P+  T  I+
Sbjct: 1001 EAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 180/405 (44%), Gaps = 37/405 (9%)

Query: 132  LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
            LS F+ +  R   V     Y  +IN   K    D A      MK   +E  +  +  L+ 
Sbjct: 618  LSLFDEMV-RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLS 676

Query: 192  RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---- 247
              V+      A+  FN ++E    PD   ++I+++ L +  R  EA    DS+K++    
Sbjct: 677  SLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILP 736

Query: 248  --------------------------------FEPDVIVYTNLVRGWCRAGNISEAERVF 275
                                             EPDV+ YT+L+    + G +S A  +F
Sbjct: 737  DLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIF 796

Query: 276  REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            R M      P+V TYS +ID+L + G++  A+  F   +  GC PN   +++L+    K 
Sbjct: 797  RAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKK 856

Query: 336  SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               ++ L+++ +M+R  C  + +TYN L+    K G+L  A K+L  M + GC P+  T+
Sbjct: 857  GMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTY 916

Query: 396  NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
            N++   + K+G V+ A   + +MK+    P+ +T+  L++            +L   MEE
Sbjct: 917  NILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEE 976

Query: 456  NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
                P+V TY +LI +    G  + A     EM  + C+  G ++
Sbjct: 977  EGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITI 1021



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 182/402 (45%), Gaps = 35/402 (8%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y+ +I+  GK  + D+A      MK R +   + T++I++    +AG   EA  
Sbjct: 389 SPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI----------- 253
            F+ ++E G  PD   ++ +I +L +  +  +  +    + +K    +I           
Sbjct: 449 LFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGT 508

Query: 254 ---------------------VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
                                 Y  L+  +   G++ EA ++   MK     P V TY+ 
Sbjct: 509 IEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTT 568

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++D L + G++  A  +  EM + GCEP+ +T+++LM    K  + E+ L ++++M R G
Sbjct: 569 LVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG 628

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C AD  TY+ +I+C CK   ++ A+ V   M  +G  P    +  +   + K   ++ A 
Sbjct: 629 CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +++ ++++    P+T  YNI++     S   D   KL   M+   + P++ TY  L+   
Sbjct: 689 QIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              G    A+    +M EE   +P    Y  ++  L + G+L
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGH-EPDVVAYTSLMDVLGKGGKL 789



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 152/295 (51%), Gaps = 3/295 (1%)

Query: 148  PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            PDL  Y  +++  GK  + + A++    M     E  V  ++ L+    + G  + A+  
Sbjct: 736  PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALII 795

Query: 206  FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCR 264
            F  M +  C PD + +S +I  L ++ R  EA  FF+ S+     P+V VY++L+  + +
Sbjct: 796  FRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGK 855

Query: 265  AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             G +  A  +F EM+     PN+ TY+ ++  L + G++  A  +  EM +VGC P+ +T
Sbjct: 856  KGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVT 915

Query: 325  FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            +N L+    K    ++    + +MK  G   D IT+  LI+   K  KL +A ++ +SM 
Sbjct: 916  YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSME 975

Query: 385  RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
             +G NP+  T+N++   + + G V+ A  ++ +MK   C P+ +T  I+ ++ + 
Sbjct: 976  EEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSV 1030



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/348 (20%), Positives = 153/348 (43%), Gaps = 38/348 (10%)

Query: 218 KIAFSIVISILCRKRRASEAQSFFD--SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           K+   +V  ++  ++    A+ FF     +D +   V  YT +++    A       ++ 
Sbjct: 146 KLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQIL 205

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M   G + +++  + ++        ++ A ++F +M   GC P++  +N ++ + VK 
Sbjct: 206 TAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKG 265

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
                 + V+ ++ +   + D  T+   +    + G+L+ A + +  M++ G +P   TF
Sbjct: 266 GFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTF 325

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT-------------------------- 429
            ++   + K G+++ A + +  MK+L+C PN VT                          
Sbjct: 326 TVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385

Query: 430 ---------YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                    YN L+     +   DM   L KEM++  + PN+ TY I+I++    G    
Sbjct: 386 NNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPE 445

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A++   ++ E+  + P    Y  ++  L + GQ+ K   ++++MV++G
Sbjct: 446 AWQLFHDLKEQGAV-PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 200/422 (47%), Gaps = 39/422 (9%)

Query: 148 PDLYHE--MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y    +IN    + + D A   +  +     +    TF+ LVR     G   EA+  
Sbjct: 89  PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F++M   G  P+ + +  +++ LC+ R+ +EA + F  +  K   PD+  Y +L+   C 
Sbjct: 149 FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
                    +  EM  + I PNV + +IV+DALC+ G++T AHDV   M++ G EP+ +T
Sbjct: 209 LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVT 268

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  LM  H   S  ++ ++V++ M R GC  + ++YN LI+ +CK  +++ A+ +   M 
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           R+   PN  T++ +   +  +G +  A  ++ +M      PN VTY+IL+     +    
Sbjct: 329 RQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLA 388

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGH--------------------W------ 478
             + L K +E + ++P+V  Y I I   C  G                     W      
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMI 448

Query: 479 ---------NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                    + A K  REM E  CL+ G + Y  + Q L +  +  +  +L+E+M+ RGF
Sbjct: 449 RGLCKRGLLDEASKLFREMDENGCLRNGCT-YNTITQGLLQNNKTSRAIQLLEEMLARGF 507

Query: 530 TA 531
           +A
Sbjct: 508 SA 509



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 167/347 (48%), Gaps = 6/347 (1%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT 185
           L + L+ F+ + A+     SPD+  Y+ +I+    + ++      ++ M    +   V +
Sbjct: 177 LTEALNLFSEMIAKGI---SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
            +I+V    + G   EA    + M + G  PD + ++ ++   C +    EA   FD + 
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           ++    +V+ Y  L+ G+C+   I +A  +F EM    + PN  TYS +I  LC  G++ 
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQ 353

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +F EM+  G  PN +T++ L+    K  R  + + +   ++    + D   YN  I
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  C+ G LE A  + +++  +G  P+  T N++ R + K G ++ A +++ +M +  C 
Sbjct: 414 DGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCL 473

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            N  TYN + Q    +  T   ++L +EM       +V+T  +L+ M
Sbjct: 474 RNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKM 520



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 123/236 (52%), Gaps = 1/236 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+++ D A +  + M  + +     T+S L+      G   +A+  FN M 
Sbjct: 304 YNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMV 363

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + +SI++  LC+  R +EA +   +++    +PDV VY   + G CRAG++ 
Sbjct: 364 ACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLE 423

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  +   G+QP+V+T++I+I  LC+ G +  A  +F EM E GC  N  T+N + 
Sbjct: 424 AARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTIT 483

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           +  ++ ++T + +Q+  +M   G  AD  T   L+     DG  +   ++L   +R
Sbjct: 484 QGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCEFMR 539



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 138/314 (43%), Gaps = 36/314 (11%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +  L+    +  + S    + ++M   GI P+VYT +IVI++ C   ++  A  V
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L++G +P++ TF  L+R      +  + L V+++M   G + + +TY  L++  CK
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 370 DGKLEDAIKVLNSMVRKG---------------CN--------------------PNAST 394
           D +L +A+ + + M+ KG               CN                    PN  +
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
            N++   + K G V  AH +   M     EP+ VTY  LM         D  +K+   M 
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            N    NV +Y  LI  YC +   + A     EM  ++ L P +  Y  ++  L   G+L
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQE-LIPNTMTYSTLIHGLCHVGRL 352

Query: 515 QKHEELVEKMVDRG 528
           Q    L  +MV  G
Sbjct: 353 QDAIALFNEMVACG 366



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 136/281 (48%), Gaps = 4/281 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV +   A   +D+M    VE  V T++ L+  +       EAV  F+ M   GC  + 
Sbjct: 245 GKVTE---AHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNV 301

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           ++++ +I+  C+ +R  +A   F+ + + +  P+ + Y+ L+ G C  G + +A  +F E
Sbjct: 302 VSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNE 361

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   G  PN+ TYSI++D LC+  ++  A  +   +     +P+   +N  +    +A  
Sbjct: 362 MVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGD 421

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E    +++ +   G + D  T+N +I   CK G L++A K+   M   GC  N  T+N 
Sbjct: 422 LEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNT 481

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           I + + +    + A ++  +M       +  T  +L++M +
Sbjct: 482 ITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLS 522



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 1/219 (0%)

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  ML +   P    F  L+    K      VL +  +M   G   D  T   +I+  C 
Sbjct: 44  FHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCH 103

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +++ A+ VL  +++ G  P+ +TF  + R +  +G +  A  ++ KM     +PN VT
Sbjct: 104 LNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVT 163

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  LM      +     L L  EM    + P++ TY  LI   C +  W +    + EM+
Sbjct: 164 YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 223

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + K + P      +V+  L + G++ +  ++V+ M+  G
Sbjct: 224 KSK-IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGG 261



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 1/115 (0%)

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M  +   P    +  L+   A  K    VL L K+M+   + P+V T  I+I  +C 
Sbjct: 44  FHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCH 103

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +   + A   + ++++    +P ++ +  +++ L   G++ +  ++ +KMV  GF
Sbjct: 104 LNRVDFALSVLAKILKLG-HQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGF 157


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 178/342 (52%), Gaps = 2/342 (0%)

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-P 250
           + VR G   E       M   G  PD I  + +I   C+  +  +A    + ++D    P
Sbjct: 93  KLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVP 152

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           DVI Y  L+ G C  G   +AE++  +M   G  P+V T++I+I+ LCR G + RA DV 
Sbjct: 153 DVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVL 212

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M + GC PNS+++N L+    K  + E+ ++   +M   GC  D +TYN L+   CKD
Sbjct: 213 EKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKD 272

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           GK++ A+++LN +  KGC+P   T+N +   +SK+G  + A ++  +M+    +P+ +TY
Sbjct: 273 GKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITY 332

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           + L+   +     D  +K   ++E   V+PN  TY  ++   C     + A  ++  M++
Sbjct: 333 SSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQ 392

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
             C KP  + Y ++++ L   G  ++  EL+ ++  RG   +
Sbjct: 393 RGC-KPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKK 433



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 149/329 (45%), Gaps = 18/329 (5%)

Query: 87  PDFTIPSLSL--GFSQISTAHSISPSTVRHVIEKSCGV----RHGIPLLQVLSFFNWVTA 140
           PD  IP  SL  GF +I        + +  +IE S  V     + + +  + S   W+ A
Sbjct: 117 PDI-IPCTSLIRGFCKIGKTRK--ATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDA 173

Query: 141 RPEFVH------SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
                       SP +  ++ +IN   +      A   ++ M          +++ L+  
Sbjct: 174 EKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHG 233

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPD 251
           + +      A+    +M   GC PD + ++ +++ LC+  +   A    + L  K   P 
Sbjct: 234 FCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPV 293

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           +I Y  ++ G  + G   +A ++  EM+  G++P++ TYS ++  L R G++  A   F 
Sbjct: 294 LITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFH 353

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           ++  +G +PN+IT+N +M    KA +T++ +     M + GC+    +Y  LI+    +G
Sbjct: 354 DLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEG 413

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
             ++A+++LN +  +G    +S   +  R
Sbjct: 414 LAKEALELLNELCLRGVVKKSSAEKVAVR 442



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 2/203 (0%)

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           NNL ++ V+    E+  +    M   G   D I    LI   CK GK   A +++  +  
Sbjct: 89  NNLSKL-VRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G  P+  T+N++   +   G    A ++   M    C P+ VT+NIL+           
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            + + ++M ++   PN  +Y  L+  +C       A +Y+ +M    C  P    Y  +L
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCY-PDIVTYNTLL 266

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
             L + G++    EL+ ++  +G
Sbjct: 267 TALCKDGKVDAAVELLNQLSSKG 289


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 191/382 (50%), Gaps = 7/382 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM---E 210
           ++   G+ R+F      +  MK  +++  V TF IL+    +     EA+  F +M   E
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370

Query: 211 EYG--CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVRGWCRAG 266
             G    PD I ++ +I  LC+  R  E     + ++   +  P+ + Y  L+ G+C+A 
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            I  A  +F +M   G+ PNV T + ++D +C+ G+I  A + F EM   G + N++T+ 
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+R     +  EK ++++++M   GC  D I Y  LI    + GKL+ A  VL+ M   
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G +P+  +FN++     +   ++ A+ M  +M++   +P+ VTYN L+  F+ +      
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +L K+M +  + P V TY  LI  YC  G+ + A K  R+M     + P + +Y +++ 
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L R  Q+     L++ M  +G
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKG 692



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 188/415 (45%), Gaps = 50/415 (12%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRN-----VEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           +IN   K R+ D A    + M         VE  V T++ L+    + G   E +    R
Sbjct: 346 LINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVER 405

Query: 209 ME-EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
           M  +  C P+ + ++ +I   C+      A+  FD + KD   P+V+    LV G C+ G
Sbjct: 406 MRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG 465

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            I+ A   F EM+  G++ N  TY+ +I A C    I +A ++F EMLE GC P++I + 
Sbjct: 466 RINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYY 525

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    +A + ++   V ++MK  G   D +++N LI+  C+  KL++A ++L  M   
Sbjct: 526 TLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENA 585

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKM---------------------------- 418
           G  P+  T+N +    SK GD + AHR+  KM                            
Sbjct: 586 GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEA 645

Query: 419 ----KDL----KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
               +D+    K  PNTV YNIL+         D+ L L  +M+   V+PN NT+     
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFN---A 702

Query: 471 MYCGMGHWN---NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           M+ G+   N    A++ +  M E  C  P     E++ + L   G+  K +  V+
Sbjct: 703 MFKGLQEKNWLSKAFELMDRMTEHAC-NPDYITMEILTEWLSAVGETAKLKSFVQ 756



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 151/294 (51%), Gaps = 5/294 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F + M+ + ++    T++ L+R +       +A+  F+ M E GC+PD I +  +IS
Sbjct: 470 AVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLIS 529

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L +  +   A      +K+  F PD++ +  L+ G+CR   + EA  + +EM+ AGI+P
Sbjct: 530 GLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKP 589

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+ +I    + G  + AH +  +M++ G  P  +T+  L+  +      ++ ++++
Sbjct: 590 DGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIF 649

Query: 346 NQMKRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             M        +T+ YN LI+  C+  +++ A+ +++ M  KG  PN +TFN +F+ + +
Sbjct: 650 RDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQE 709

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              ++ A  +  +M +  C P+ +T  IL +  +    T    KLK  ++  EV
Sbjct: 710 KNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGET---AKLKSFVQGYEV 760



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 196/457 (42%), Gaps = 61/457 (13%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEM-INLAGKVRQFDLAWHFIDLMK---SRNVEITVDT 185
           + L FFNWV A      SP L   +        R+ +     +DL K   S  + ++V+ 
Sbjct: 102 KALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNA 161

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF--SIVISILCRKRRASEAQSFFDS 243
            ++L+R + RA +  E+   +N +    C   ++    +I+I +L RK R  +A    D 
Sbjct: 162 ATLLIRCFGRAQMVDESFLVYNEL----CPSRRLTHIRNILIDVLFRKGRVDDALHLLDE 217

Query: 244 L---KDKFEPDV----IVYTNLVRGWCRAGNISEAERVFREMKMAG--IQPNVYTYSIVI 294
           +   K +F P+     IV++ L +       + E E V    K A   + PN    + +I
Sbjct: 218 MLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLI 277

Query: 295 DALCRCGQITRAHDV-----------------------------------FAEMLEVGCE 319
             LCR G+  RA DV                                    AEM E+  +
Sbjct: 278 SRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQ 337

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQM-----KRLGCEADTITYNFLIDCHCKDGKLE 374
           PN +TF  L+    K  R ++ L+V+ +M          E D ITYN LID  CK G+ E
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQE 397

Query: 375 DAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + + ++  M  +  C PN  T+N +     K   +  A  ++ +M      PN VT N L
Sbjct: 398 EGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTL 457

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +         +  ++   EM+   ++ N  TY  LI  +C + +   A +   EM+E  C
Sbjct: 458 VDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGC 517

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             P + VY  ++  L +AG+L +   ++ KM + GF+
Sbjct: 518 -SPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS 553


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 180/353 (50%), Gaps = 8/353 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRM----EEYGC--APDKIAFSIVISILCRKRRASEAQ 238
           T+  L++   R G  + A+     M      YG    P  I++SI+I  LC+ RR  EA+
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEAR 262

Query: 239 SFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             F+ +K     P VI YT+L+ G+C  G   EA+R+F EM   G+QPNV T++++ID L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 322

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C+ G++  A D+   M++ G  PN +T+N+L+             +++  M   GCE D 
Sbjct: 323 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDV 382

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           I Y  LI+ +CK  K+E+A+K+ N M++ G  P+  T+  +   + + G V  A +++G 
Sbjct: 383 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 442

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           MK      +   Y I +     +      ++L  +++   ++ ++  +  LI   C  G 
Sbjct: 443 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              A++   ++ +E+ L+P    Y +++ +  R GQ+ K   L +KM   G T
Sbjct: 503 LETAWELFEKLPQEE-LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCT 554



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 186/381 (48%), Gaps = 11/381 (2%)

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
           H +  LA K++ +   ++  + M+   +     T +IL+          E +     +  
Sbjct: 101 HLLSGLA-KIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILR 159

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISE 270
            G  PD + ++ +I  LC + R S+A   F  + K    P+ I Y  L++G CR GNIS 
Sbjct: 160 RGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISI 219

Query: 271 AERVFREM----KMAGI--QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           A ++ +EM     + GI  +P V +YSI+IDALC+  +   A D+F EM   G  P  I+
Sbjct: 220 ALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVIS 279

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+       + E+  +++N+M   G + + +T+N LID  CK+GK+ +A  +L  M+
Sbjct: 280 YTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI 339

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           ++G  PN  T+N +      +GD+N A  ++  M    CEP+ + Y +L+  +  +   +
Sbjct: 340 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 399

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS-SVYEM 503
             +KL   M +    P+V TY  L+T     G   +A K    M       PG   +Y +
Sbjct: 400 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGI--PGDLYIYGI 457

Query: 504 VLQQLRRAGQLQKHEELVEKM 524
            L  L + G L +  EL  K+
Sbjct: 458 FLNGLCKNGCLFEAMELFNKL 478



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 159/320 (49%), Gaps = 1/320 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K R+ D A    + MK + +  TV +++ L+  +   G   EA   FN M 
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMV 304

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + F+++I +LC++ +  EA+   + +  +   P+++ Y +L+ G+C  G+++
Sbjct: 305 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 364

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  M   G +P+V  Y+++I+  C+  ++  A  ++  ML+VG  P+  T+  L+
Sbjct: 365 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 424

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  +     +++  MK  G   D   Y   ++  CK+G L +A+++ N +      
Sbjct: 425 TGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK 484

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   FN +   + K G +  A  ++ K+   + +P+ VTYNI++  F           L
Sbjct: 485 LDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANIL 544

Query: 450 KKEMEENEVEPNVNTYRILI 469
            ++ME+N   P+  TY  LI
Sbjct: 545 FQKMEKNGCTPDKITYATLI 564



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I++  K  +   A   +++M  R +   + T++ L+  +   G    A   F  M 
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 374

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
             GC PD I ++++I+  C+  +  EA   ++  L+    PDV  Y  L+ G  + G + 
Sbjct: 375 SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVG 434

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A+++F  MK+ GI  ++Y Y I ++ LC+ G +  A ++F ++     + +   FN L+
Sbjct: 435 DAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLI 494

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA + E   +++ ++ +   + D +TYN +I   C+ G++  A  +   M + GC 
Sbjct: 495 DGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCT 554

Query: 390 PNASTFNMIFR 400
           P+  T+  + R
Sbjct: 555 PDKITYATLIR 565



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 141/302 (46%), Gaps = 8/302 (2%)

Query: 234 ASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           A++A  FF   +     P +  +T+L+ G  +  + S+   ++ +M+++GI P+  T +I
Sbjct: 77  ATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++ LC   ++     V A +L  G  P+ +T+  L++      R  K   ++ +M++LG
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKV----LNSMVRKGCN--PNASTFNMIFRCISKLG 406
           C  + ITY  L+   C+ G +  A+K+    LN     G N  P   ++++I   + K  
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
             + A  ++ +MK     P  ++Y  L+  F      +   +L  EM    V+PNV T+ 
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFN 316

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +LI + C  G    A   +  MI ++ + P    Y  +++     G L    EL   M  
Sbjct: 317 VLIDVLCKEGKVIEAKDLLEVMI-QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPS 375

Query: 527 RG 528
           +G
Sbjct: 376 KG 377



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 124/242 (51%), Gaps = 3/242 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+L  Y+ +I     V   + A      M S+  E  V  +++L+  Y +     EA+  
Sbjct: 345 PNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKL 404

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCR 264
           +N M + G  PD   +  +++ L +  +  +A+  F  +K    P D+ +Y   + G C+
Sbjct: 405 YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCK 464

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA  +F ++K   I+ ++  ++ +ID LC+ G++  A ++F ++ +   +P+ +T
Sbjct: 465 NGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVT 524

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    +  +  K   ++ +M++ GC  D ITY  LI    +  KLE  +++L+ MV
Sbjct: 525 YNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMV 584

Query: 385 RK 386
           ++
Sbjct: 585 QR 586



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 44/280 (15%)

Query: 298 CRCGQIT--RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           C+ G IT  +A   F  M+     P   +F +L+    K     +V  +YNQM+  G   
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D  T N L++C C   ++ + + V+  ++R+G  P+  T+  + + +     ++ A  ++
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM---------------------- 453
            +M+ L C PN +TY  LM+    + +  + LKL +EM                      
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 454 ----------------EENEVE---PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                           EE +V+   P V +Y  LI  +C  G W  A +   EM+ +  +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQG-V 308

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           +P    + +++  L + G++ + ++L+E M+ RG     L
Sbjct: 309 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL 348


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 189/386 (48%), Gaps = 2/386 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S   Y  ++   GK R  +     +  M++  ++  V TF+I +R   RAG   EA 
Sbjct: 221 FRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 280

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGW 262
               RM++ GC PD + ++++I  LC  R+   A+  F  +K  + +PD + Y  L+  +
Sbjct: 281 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRF 340

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
               ++    + + EM+  G  P+V T++I++DALC+ G    A      M + G  PN 
Sbjct: 341 SDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNL 400

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+N L+   ++  R +  L++++ M+ LG +    TY   ID + K G    A++    
Sbjct: 401 HTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 460

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M  KG  PN    N     ++K G    A +++  +KD+   P++VTYN++M+ ++    
Sbjct: 461 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 520

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  +KL  EM EN  EP+V     LI         + A+K    M E K LKP    Y 
Sbjct: 521 IDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK-LKPTVVTYN 579

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
            +L  L + G++Q+  EL E MV +G
Sbjct: 580 TLLAGLGKNGKIQEAIELFEGMVQKG 605



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 190/403 (47%), Gaps = 8/403 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYH---EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            S+F  V      VH+ +  +   E + + GK+ +  +A+ F DLM+ R ++   +T+  
Sbjct: 104 FSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEE--MAYVF-DLMQKRIIKRDTNTYLT 160

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDK 247
           + +     G   +A  A  +M E+G   +  +++ +I +L + R  +EA   +  +  D 
Sbjct: 161 IFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDG 220

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           F P +  Y++L+ G  +  +I     + +EM+  G++PNVYT++I I  L R G+I  A+
Sbjct: 221 FRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 280

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           ++   M + GC P+ +T+  L+     A + +   +V+ +MK    + D +TY  L+D  
Sbjct: 281 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRF 340

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
             +  L+   +  + M + G  P+  TF ++   + K G+   A      M+D    PN 
Sbjct: 341 SDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNL 400

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TYN L+         D  L++   ME   V+P   TY + I  Y   G   +A +   +
Sbjct: 401 HTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 460

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           M + K + P        L  L +AG+ ++ +++   + D G  
Sbjct: 461 M-KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 502



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 4/338 (1%)

Query: 170  FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            F    K   V+  + T+++L+   + A +   A   F +++  GC PD   ++ ++    
Sbjct: 774  FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYG 833

Query: 230  RKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFRE-MKMAGIQPNV 287
            +  +  E    +  +   + EP+ I +  ++ G  +AGN+ +A  ++ + M      P  
Sbjct: 834  KSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 893

Query: 288  YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             TY  +ID L + G++  A  +F  M + GC PN   +N L+    KA   +    ++ +
Sbjct: 894  CTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKR 953

Query: 348  MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
            M + G   D  TY+ L+DC C  G++++ +     +   G NP+   +N+I   + K   
Sbjct: 954  MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHR 1013

Query: 408  VNGAHRMYGKMKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +  A  ++ +MK  +   P+  TYN L+     +   +   K+  E++   +EPNV T+ 
Sbjct: 1014 LEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1073

Query: 467  ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             LI  Y   G   +AY   + M+      P +  YE +
Sbjct: 1074 ALIRGYSLSGKPEHAYAVYQTMVTGG-FSPNTGTYEQL 1110



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 179/393 (45%), Gaps = 11/393 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+   + +IN   K  + D AW     MK   ++ TV T++ L+    + G   EA+  
Sbjct: 538 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 597

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCR 264
           F  M + GC P+ I F+ +   LC+    + A +  F  +     PDV  Y  ++ G  +
Sbjct: 598 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 657

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-EVGCEPNSI 323
            G + EA   F +MK   + P+  T   ++  + + G I  A+ + A  L     +P ++
Sbjct: 658 NGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANL 716

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGC--EADTITYNFLIDCHCKDGKLEDAIKVLN 381
            + +LM   +  +  +  +    ++   G   + D+I    +I    K      A  +  
Sbjct: 717 FWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVP-IIRYSFKHNNASGARMLFE 775

Query: 382 SMVRK-GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
              +  G  P   T+N++   + +   +  A  ++ ++K+  C P+  TYN L+  +  S
Sbjct: 776 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKS 835

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D + ++ KEM  +E EPN  T+ I+I+     G+ ++A     +++ ++   P +  
Sbjct: 836 GKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 895

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           Y  ++  L ++G+L + ++L E M D G   RP
Sbjct: 896 YGPLIDGLSKSGRLYEAKQLFEGMSDYG--CRP 926



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 163/371 (43%), Gaps = 26/371 (7%)

Query: 165  DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
            +L W   DLM S   E  +D       R V  G+  +               D I   I 
Sbjct: 715  NLFWE--DLMGSILAEAGIDNAVSFSERLVANGICRDG--------------DSILVPI- 757

Query: 225  ISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
            I    +   AS A+  F+        +P +  Y  L+ G   A  I  A+ VF ++K  G
Sbjct: 758  IRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTG 817

Query: 283  IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
              P+V TY+ ++DA  + G+I    +++ EM    CEPN+IT N ++   VKA   +  L
Sbjct: 818  CIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDAL 877

Query: 343  QVY-NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
             +Y + M          TY  LID   K G+L +A ++   M   GC PN + +N++   
Sbjct: 878  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILING 937

Query: 402  ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
              K G+ + A  ++ +M      P+  TY++L+         D  L   +E++E+ + P+
Sbjct: 938  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPD 997

Query: 462  VNTYRILITMYCGMGHWN---NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            V  Y ++I    G+G ++    A     EM + + + P    Y  ++  L  AG +++  
Sbjct: 998  VVCYNLIIN---GLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAG 1054

Query: 519  ELVEKMVDRGF 529
            ++  ++   G 
Sbjct: 1055 KIYNEIQRAGL 1065



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 2/181 (1%)

Query: 150  LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            +Y+ +IN  GK  + D A      M    V   + T+S+LV      G   E +H F  +
Sbjct: 930  IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFREL 989

Query: 210  EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGN 267
            +E G  PD + ++++I+ L +  R  EA   F+ +K      PD+  Y +L+     AG 
Sbjct: 990  KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGM 1049

Query: 268  ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            + EA +++ E++ AG++PNV+T++ +I      G+   A+ V+  M+  G  PN+ T+  
Sbjct: 1050 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1109

Query: 328  L 328
            L
Sbjct: 1110 L 1110


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 187/399 (46%), Gaps = 3/399 (0%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L   N   AR +F  S  +Y E+I   G    FDL    +  M+    E         V 
Sbjct: 73  LQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVE 132

Query: 192 RYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FE 249
            Y R     +AV    N++  +G   D   ++ ++++L    R    +S ++ + D+  +
Sbjct: 133 SYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQ 192

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PDV+    L++  CRA  +  A  +  EM    + P+  T++ ++      G I  A  V
Sbjct: 193 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRV 252

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +M+E GC P  +T N L+  + K  R E  L    +    G E D +TYN  + C C+
Sbjct: 253 KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQ 312

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +G +  A+KV++ M+++G +P+  T+N +  C+SK G+++ A  +  +M D  C P+T T
Sbjct: 313 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 372

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +N L+    +    +  L L +E+    + P+V T+ ILI   C +G  +   +   EM 
Sbjct: 373 FNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 432

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              C  P    Y +++  L   G+L    +L+++M   G
Sbjct: 433 SSGC-APDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 178/365 (48%), Gaps = 3/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +DLM     +  V T++ ++    + G   EA    N+M + GC PD   F+ +I 
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC + R  EA      L  K   PDV  +  L+   C+ G+     R+F EMK +G  P
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+I+ID LC  G++  A D+  EM   GC  +++T+N ++    K  R E+  +V+
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM   G     +T+N LID  CK  +++DA +++  MV++G  P+  T+N I     K 
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A  +   M     E + VTY  L+     +  T + LKL + M    + P    Y
Sbjct: 559 GDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKM 524
             +I       +  +A    REM E     P +  Y++V + L R  G +++  + + +M
Sbjct: 619 NPVIQSLFRRNNLRDALSLFREMTEVG-EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEM 677

Query: 525 VDRGF 529
           V++GF
Sbjct: 678 VNKGF 682



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 2/381 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ ++N+  +  +  L     + M  R ++  V T + L++   RA     AV     M
Sbjct: 162 VYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 221

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNI 268
             +  APD+  F+ ++     +     A      + +    P  +    L+ G+C+ G +
Sbjct: 222 SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRV 281

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A    ++    G +P+  TY+  +  LC+ G ++ A  V   ML+ G +P+  T+N +
Sbjct: 282 EDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K    ++   + NQM   GC  DT T+N LI   C   +LE+A+ +   +  KG 
Sbjct: 342 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGL 401

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +P+  TFN++   + K+GD +   R++ +MK   C P+ VTYNIL+    +       L 
Sbjct: 402 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD 461

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L KEME N    +  TY  +I   C       A +   +M +   +   +  +  ++  L
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM-DAHGISRSAVTFNTLIDGL 520

Query: 509 RRAGQLQKHEELVEKMVDRGF 529
            +A ++    EL+E+MV  G 
Sbjct: 521 CKAKRIDDATELIEQMVKEGL 541



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 39/299 (13%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y  + +IN   KV    L     + MKS        T++IL+      G    A+ 
Sbjct: 402 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD 461

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               ME  GC    + ++ +I  LC++ R  EA+  FD +         + +  L+ G C
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLC 521

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A  I +A  +  +M   G+QP+  TY+ ++   C+ G + +A D+   M   G E + +
Sbjct: 522 KAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVV 581

Query: 324 TFNNLMRVHVKASRTE-----------------------------------KVLQVYNQM 348
           T+  L+    KA RT+                                     L ++ +M
Sbjct: 582 TYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREM 641

Query: 349 KRLGCEADTITYNFLIDCHCKDGK-LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
             +G   D +TY  +    C+ G  +++A   L  MV KG  P  S+F M+   +  LG
Sbjct: 642 TEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 700


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 177/368 (48%), Gaps = 2/368 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   ++ M    V +    ++ ++  +   G    A   F+ M+  G A D + ++ +I+
Sbjct: 348 ALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLIN 407

Query: 227 ILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LCR     EA+    + L  + + D + YT LV G+C+ G ++EA +V   M   G+ P
Sbjct: 408 GLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAP 467

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+ + D LC+ G +  A+++  EM   G E N+ T+N+L+    KA   ++ ++  
Sbjct: 468 NVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTM 527

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M   G + D  TY  LID  CK G+L+ A  +L  M+  G  P   T+N++       
Sbjct: 528 ADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMS 587

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V G  ++   M +    PN  TYN LM+ +    +     ++ K M    VEPN NTY
Sbjct: 588 GRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTY 647

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            ILI  +C       A  +  EMI EK  +  +S Y  +++ L +  +  +  +L   M 
Sbjct: 648 NILIKGHCKARSMKEAQYFHNEMI-EKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMR 706

Query: 526 DRGFTARP 533
             GFTA P
Sbjct: 707 KEGFTAEP 714



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 169/346 (48%), Gaps = 5/346 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++IL++    AG   +A   F+ M      PD + + I+I   C       A    D
Sbjct: 262 VCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLD 318

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  +  EP+  VYT++V   C  G +S+A  V  +M    +  +   Y+ V+   C  G
Sbjct: 319 DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKG 378

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A   F EM   G   + +T+  L+    +A   ++  +V  +M     + D +TY 
Sbjct: 379 DLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYT 438

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+D +CK GK+ +A +V N+MV++G  PN  T+  +   + K GDV  A+ +  +M + 
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             E N  TYN L+     +   D  ++   +M+   ++P+V TY  LI   C  G  + A
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +  ++EM++   +KP    Y +++     +G+++  ++L+E M+++
Sbjct: 559 HDLLQEMLDNG-IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK 603



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 36/342 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   +  +   A   +  M +R +++   T+++LV  Y + G  AEA    N M 
Sbjct: 402 YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV 461

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G AP+ + ++ +   LC++     A      + +K  E +   Y +L+ G C+AG + 
Sbjct: 462 QRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLD 521

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R   +M  AG++P+VYTY+ +IDALC+ G++ RAHD+  EML+ G +P  +T+N LM
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLM 581

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                                              +  C  G++E   K+L  M+ K  +
Sbjct: 582 -----------------------------------NGFCMSGRVEGGKKLLEWMLEKNIH 606

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PNA+T+N + +      ++     +Y  M     EPN  TYNIL++    ++S       
Sbjct: 607 PNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYF 666

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
             EM E       ++Y  LI +      +  A K   +M +E
Sbjct: 667 HNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKE 708



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 123/311 (39%), Gaps = 68/311 (21%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAE--------------------------------M 313
           NV +Y+I++  LC  G++  A  +F E                                M
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGYCALGELENAVKLLDDM 320

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQV----------------------------- 344
           +  G EPN+  + +++ +     R    L V                             
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380

Query: 345 ------YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
                 +++M+R G   D +TY  LI+  C+ G+L++A KVL  M+ +  + +  T+ ++
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVL 440

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                K G +  A +++  M      PN VTY  L              +L  EM    +
Sbjct: 441 VDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           E N  TY  LI   C  G+ + A + + +M +   LKP    Y  ++  L ++G+L +  
Sbjct: 501 ELNACTYNSLINGLCKAGYLDQAMRTMADM-DAAGLKPDVYTYTTLIDALCKSGELDRAH 559

Query: 519 ELVEKMVDRGF 529
           +L+++M+D G 
Sbjct: 560 DLLQEMLDNGI 570



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 84/174 (48%), Gaps = 4/174 (2%)

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           + +  +YN L+   C  G++EDA ++ + M      P+  T+ ++      LG++  A +
Sbjct: 259 DKNVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVK 315

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M     EPN   Y  ++ +          L + ++M  ++V  +   Y  +++ +C
Sbjct: 316 LLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFC 375

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
             G   +A ++  EM + K L      Y  ++  L RAG+L++ E+++++M+ R
Sbjct: 376 NKGDLVSARRWFDEM-QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLAR 428


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 187/378 (49%), Gaps = 2/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  + D A    + MKS     ++ T++ L+    R G    A+  F  M 
Sbjct: 13  YNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML 72

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           +   + D I+F+I+++ LCR  +   A  FF  + D+  P+VI Y+ L+ G C+A  +S+
Sbjct: 73  DRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQ 131

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A  +   MK  G  P+V TY+I++D LC+  ++  A +V  EML+ GC PN +T+N+L+ 
Sbjct: 132 AVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLH 191

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              +A R    L +   M   GC  + +TY  LID  CK G+++DA  +L  M+ KG  P
Sbjct: 192 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 251

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +   +NM+   + K   V+ +  +  +      +P+ VTY+ ++     S   D   +L 
Sbjct: 252 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 311

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
             ++     P+V  Y  LI   C  G  + A+     M  + C       Y  ++  L +
Sbjct: 312 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC-DADVVTYSTLIDGLCK 370

Query: 511 AGQLQKHEELVEKMVDRG 528
           AG++ +   L+ +MV  G
Sbjct: 371 AGRVDEAHLLLARMVRMG 388



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 199/410 (48%), Gaps = 43/410 (10%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AGK+     A  F   M  R     V T+S+L+    +A   ++AV     M+  GC+PD
Sbjct: 92  AGKIET---ALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 147

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            I ++I++  LC++ + + A      + D    P+++ Y +L+ G CRA  +S+A  + R
Sbjct: 148 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           +M   G  PNV TY  +ID LC+ G++  A  + A+M++ G  P+ + +N L+    KA 
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267

Query: 337 RTEKVLQVYNQ-----------------------------------MKRLGCEADTITYN 361
           + ++ + +  +                                   +K  GC  D I Y+
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID  CK GK+++A  +   M   GC+ +  T++ +   + K G V+ AH +  +M  +
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN- 480
              P+T+TYN L++        D  ++L +EME +   P+  TY ILI   C M   ++ 
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 447

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV-EKMVDRGF 529
           A  Y +EMI+   + P    Y ++L+ L+++  L +   LV ++MV  G+
Sbjct: 448 ALDYFQEMIDNGVI-PDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 496



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 168/358 (46%), Gaps = 2/358 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+    E  V T++ L+    +      A   F  M+   C+P  + ++ ++  L R  +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
              A + F  + D+   DVI +  LV G CRAG I  A   FR+M      PNV TYS++
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVL 119

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID LC+  ++++A ++   M   GC P+ IT+  L+    K S+     +V  +M   GC
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + +TYN L+   C+  ++ DA+ ++  M  +GC PN  T+  +   + K+G V  A  
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           M   M D    P+ + YN+L+     +   D  + L +      ++P+V TY  +I   C
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
                + A + +  +    C  P   +Y  ++  L +AG++ +  +L E M   G  A
Sbjct: 300 RSNRLDEACRLLLYVKSRGC-PPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDA 356



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 5/246 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PDL  Y+ +IN   K  Q D +   +    S  ++  V T+S ++    R+    EA  
Sbjct: 250 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 309

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
               ++  GC PD I +S +I  LC+  +  EA   ++ +  D  + DV+ Y+ L+ G C
Sbjct: 310 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLC 369

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG + EA  +   M   G  P+  TY+ +I  LC    +  A ++  EM    C P+++
Sbjct: 370 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 429

Query: 324 TFNNLMRVHVKASRTEK-VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK-VLN 381
           T+N L+    +  R +   L  + +M   G   D ITY+ L++   K   L +    VL+
Sbjct: 430 TYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 489

Query: 382 SMVRKG 387
            MV+ G
Sbjct: 490 QMVQLG 495


>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
          Length = 927

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 193/391 (49%), Gaps = 2/391 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +  F H+   Y+ M+++ G+ RQF+     +  M  + + +T++TFSI ++ +
Sbjct: 255 FFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGL-LTMETFSIAIKAF 313

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             A    +AV  F  M+ Y         + ++  L R +   EAQ+ F+ L+D+F P++ 
Sbjct: 314 AAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLR 373

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+ GWCR  N+ EA R + EM   G +P++  +  +++ L +C + + A  +F  M
Sbjct: 374 TYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVM 433

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  T+  L+R   K  + ++ ++ +++M   GC+ D   Y  LI       K+
Sbjct: 434 KAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKM 493

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +    +L  M  KGC  +  T+N + + ++     + A R+Y KM     +P   TYN++
Sbjct: 494 DKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMM 553

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M+ +  +++ +M   + KEM      P+ N+Y + I      G    A +Y+ EMI EK 
Sbjct: 554 MKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMI-EKG 612

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +K     Y        RAG+    EEL  KM
Sbjct: 613 MKAPQLDYNKFAADFSRAGKPDILEELARKM 643


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 224/500 (44%), Gaps = 67/500 (13%)

Query: 81  SNPSLNPDFTIPSLSLGFSQIST------------AHSISPSTVRH--VIEKSCGVRHGI 126
           S+PS   + T  +L  GFS+               A   SP  + H  +++  C +    
Sbjct: 17  SDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGD-- 74

Query: 127 PLLQVLSFFNWVTARPEFVHSPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVD 184
            L + LS F     R +   SP  +   I + G  + ++ D A+  +D M  ++      
Sbjct: 75  -LDRALSHF-----RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAA 128

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            ++ L+    + G    A +    M E  C PD I ++ +I   C+     EA+   + +
Sbjct: 129 VYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM 188

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           K+    PD + Y  L+ G C+   + E  ++  EM  AG +P+ ++Y+ V+  LC  G+ 
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR---TEKVLQ----------------- 343
             A  +  +M+E  C P+ +T+N+LM    K S+    E++L+                 
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308

Query: 344 ---------------VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                          V   M + G   D +TYN L+D  CK GKLE+A ++L  MV K C
Sbjct: 309 IGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDC 368

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T++++   + KLG V+ A  +   M +  C+PN VT+N ++  F  +   D   K
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK 428

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + + M+E    P+V TY  LI  YC      +A+  +        + P  + Y  +L+ L
Sbjct: 429 VLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG-------ISPDKASYSSMLEGL 481

Query: 509 RRAGQLQKHEELVEKMVDRG 528
              G++++ +E+++ M  +G
Sbjct: 482 CSTGKVEEAQEVMDLMTKQG 501



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 167/322 (51%), Gaps = 9/322 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPDL  Y+ +++   K  + + A   +++M  ++    V T+SILV    + G   +A  
Sbjct: 334 SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARL 393

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
               M E GC P+ + F+ +I   C+  +  E     + +K+    PDV+ Y+ L+ G+C
Sbjct: 394 LLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC 453

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A  + +A  +       GI P+  +YS +++ LC  G++  A +V   M + GC P S 
Sbjct: 454 KANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSS 507

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +  ++       R ++ L++   M   GCE +  TY+ LI+  CK  ++EDAI VL+ M
Sbjct: 508 HYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVM 567

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + KGC P+ +T+  +     K+  ++ A++ +  M+D  CEP+ + YNIL+  F  S + 
Sbjct: 568 LEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNV 627

Query: 444 DMVLKLKKEMEENEVEPNVNTY 465
           +  +++ + M E    P+  TY
Sbjct: 628 EKAIEVMQLMLEKGCNPDAATY 649



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 186/394 (47%), Gaps = 33/394 (8%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PD+  Y+ +++   KV + D A   ++ M  R    TV T++ L+  + RA   A+A  
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYR 323

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M + G +PD + ++ ++  LC+  +  EA    + + +K   PDV+ Y+ LV G C
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G + +A  +   M   G QPN+ T++ +ID  C+ G++   H V   M EV C P+ +
Sbjct: 384 KLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVV 443

Query: 324 TFNNLMRVHVKASR-----------------------------TEKVLQVYNQMKRLGCE 354
           T++ L+  + KA+R                              E+  +V + M + GC 
Sbjct: 444 TYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCP 503

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
             +  Y  +I   C   + ++A+K+L  M  +GC PN  T++++   + K   V  A  +
Sbjct: 504 PTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINV 563

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
              M +  C P+  TY  L+  F      D   +  K M ++  EP+   Y ILI+ +C 
Sbjct: 564 LDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQ 623

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            G+   A + ++ M+E+ C  P ++ Y  +++ L
Sbjct: 624 SGNVEKAIEVMQLMLEKGC-NPDAATYFSLMRSL 656



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 42/294 (14%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  ++N   K+ + D A   +++M  R  +  + TF+ ++  + +AG   E   
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK 428

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
               M+E  C PD + +S +I   C+  R  +A +          PD   Y++++ G C 
Sbjct: 429 VLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG-----ISPDKASYSSMLEGLCS 483

Query: 265 AGNISEAERV-----------------------------------FREMKMAGIQPNVYT 289
            G + EA+ V                                    + M   G +PN+YT
Sbjct: 484 TGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYT 543

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           YSI+I+ LC+  ++  A +V   MLE GC P+  T+ +L+    K ++ +   Q +  M+
Sbjct: 544 YSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
             GCE D + YN LI   C+ G +E AI+V+  M+ KGCNP+A+T+  + R ++
Sbjct: 604 DSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 4/298 (1%)

Query: 231 KRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           K R  E  SFF +   D  +P    Y  L+ G+ RAGN      +  EM      P+V T
Sbjct: 2   KVRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVIT 61

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           ++ ++ A C+ G + RA   F    ++ C P + T+  L+    +  R ++  Q+ ++M 
Sbjct: 62  HNTILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMI 119

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           +  C  D   YN LI   CK GK++ A  VL  M+ + C P+  T+  +     +   ++
Sbjct: 120 QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD 179

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A ++  KMK+    P+TV YN L+         + V KL +EM E   EP+  +Y  ++
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVV 239

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
              C  G +  A K + +MIE+KC  P    Y  ++    +  ++ + E L+E MV R
Sbjct: 240 ACLCESGKYEEAGKILEKMIEKKC-GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 5/173 (2%)

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY-GK 417
           TY  LI    + G  +  +++ N M+ +  +P+  T N I +   ++GD++ A   + GK
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGK 85

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M    C P   TY IL+      +  D   +L  EM + +  P+   Y  LI   C MG 
Sbjct: 86  MW---CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGK 142

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + A   ++ M+E  C+ P    Y  ++    +   L +  +L+EKM + G T
Sbjct: 143 IDAARNVLKMMLERSCV-PDVITYTSLIVGCCQTNALDEARKLMEKMKESGLT 194


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 191/360 (53%), Gaps = 12/360 (3%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA----EAVHAFNRMEEY 212
           +AG+VR  D   H  D+ KS +  +   T++++++       +A    +A+  F  M+  
Sbjct: 114 MAGRVR--DALAHLQDMRKSSS-SVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKAS 170

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           G  PD  ++ I++S L    R +EA + F ++     PD++ Y  L+ G+C+ G   EA+
Sbjct: 171 GVEPDLESYHILLSALSDSGRMAEAHALFSAMT--CSPDIMTYNVLMDGYCKIGQTYEAQ 228

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + +E+  AG +PNV+TYSI+I+  C+  ++  A +VF +M+E  C PN++TFN L+   
Sbjct: 229 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 288

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD-GKLEDAIKVLNSMVRKGCNPN 391
            KA   E  ++++ +M+++GC+A  +TYN LID  CK  G +  A+ + N +   G  P 
Sbjct: 289 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 348

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+N + +       ++ A + + +M+  KC PN +TY+IL+      +      K  +
Sbjct: 349 IVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLE 407

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           +M+ +   P V TY  LI  +C  G   +A  +  +M    C  P + ++  ++  L +A
Sbjct: 408 DMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC-APNTVIFNTLIDGLCKA 466



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 8/297 (2%)

Query: 151 YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +IN   K+ + + AW  F+ +++S  V   V TF+ L+  + +AG+  +A+  F  M
Sbjct: 246 YSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV-TFNTLIAGFCKAGMLEDAIKLFAEM 304

Query: 210 EEYGCAPDKIAFSIVISILCRKRRAS-EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
           E+ GC    + ++ +I  LC+KR     A   F+ L+     P ++ Y +L++G+C A  
Sbjct: 305 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +SEA + F EM+     PNV TYSI+ID LC+  ++  A     +M   G  P  +T+  
Sbjct: 365 LSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGG 423

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K    +  L  + +MK  GC  +T+ +N LID  CK  +  D +++L  M  +G
Sbjct: 424 LINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG 483

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           C P+  T+N +   +     V  A R++  M    C PN  T+N L++     K  +
Sbjct: 484 CKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVE 537



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 191/392 (48%), Gaps = 14/392 (3%)

Query: 103 TAHSISPSTVRHVIEKSCGV-RHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMIN-LA 158
           ++ S++  T   V++  C   +    L Q + FF  + A       PDL  YH +++ L+
Sbjct: 131 SSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGV---EPDLESYHILLSALS 187

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
              R  +    F  +  S ++     T+++L+  Y + G   EA      + + G  P+ 
Sbjct: 188 DSGRMAEAHALFSAMTCSPDIM----TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNV 243

Query: 219 IAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             +SI+I+  C+  +  EA + F   ++    P+ + +  L+ G+C+AG + +A ++F E
Sbjct: 244 FTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAE 303

Query: 278 MKMAGIQPNVYTYSIVIDALCRC-GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           M+  G +  + TY+ +ID+LC+  G +  A D+F ++   G  P  +T+N+L++    A 
Sbjct: 304 MEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDAR 363

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           R  + +Q +++M+   C  + ITY+ LID  CK  ++++A K L  M   G  P   T+ 
Sbjct: 364 RLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYG 422

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +     K G++  A   + KMK   C PNTV +N L+     ++  +  L+L   M   
Sbjct: 423 GLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAE 482

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             +P+V TY  LI+  C      +A +    M
Sbjct: 483 GCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 46/387 (11%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L+R + + G   +AV  F+ M+  G  P+    + ++  LC   + S A   F  +
Sbjct: 34  TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM 93

Query: 245 K-DKFEPDVIVYTNLVRGWCRAGNI----------------------------------- 268
           +   F P    +  L+RG+  AG +                                   
Sbjct: 94  QAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKS 153

Query: 269 ----SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
                +A   F+EMK +G++P++ +Y I++ AL   G++  AH +F+ M    C P+ +T
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMT 210

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N LM  + K  +T +   +  ++ + G E +  TY+ +I+C+CK  K+E+A +V   M+
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK-ST 443
              C PNA TFN +     K G +  A +++ +M+ + C+   VTYN L+      +   
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              + L  ++E   + P + TY  LI  +C     + A +Y  EM E KC  P    Y +
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKC-APNVITYSI 388

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++  L +  ++++  + +E M   G+T
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYT 415



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 9/313 (2%)

Query: 224 VISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++S L   R+  +A   F + L   F P+   Y  L+RG+C+ G + +A  VF +MK +G
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           + PN  T + ++  LC  GQ++ A  +F EM      P S + N L+R    A R    L
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGK----LEDAIKVLNSMVRKGCNPNASTFNMI 398
                M++      T TYN ++   C + K    LE A++    M   G  P+  +++++
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              +S  G +  AH ++  M    C P+ +TYN+LM  +     T     L KE+ +   
Sbjct: 183 LSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EPNV TY I+I  YC +     A++   +MIE  C+ P +  +  ++    +AG L+   
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV-PNAVTFNTLIAGFCKAGMLEDAI 298

Query: 519 ELVEKMVDRGFTA 531
           +L  +M   G  A
Sbjct: 299 KLFAEMEKIGCKA 311



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 151/331 (45%), Gaps = 8/331 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +++   K+ Q   A   +  +     E  V T+SI++  Y +     EA  
Sbjct: 205 SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 264

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
            F +M E  C P+ + F+ +I+  C+     +A   F  + K   +  ++ Y  L+   C
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 324

Query: 264 RA-GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           +  G +  A  +F +++ AG+ P + TY+ +I   C   +++ A   F EM E  C PN 
Sbjct: 325 KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNV 383

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT++ L+    K  R ++  +    MK  G     +TY  LI+  CK G+L+ A+     
Sbjct: 384 ITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEK 443

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC PN   FN +   + K    N   R+   M    C+P+ +TYN L+    ++  
Sbjct: 444 MKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 503

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
            +   +L   M      PNV T+  LI   C
Sbjct: 504 VEDAQRLFDGM---ACAPNVTTFNFLIRGLC 531



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           N L+    +++  D  L+L KE+      PN +TY +LI  +C  G  + A     +M +
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-K 59

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              L P +S    +L  L   GQ+    +L  +M
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM 93


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 202/412 (49%), Gaps = 8/412 (1%)

Query: 122 VRHGIPLLQVLS----FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
           +R+GI  ++V      F + + +RP  + +P  ++ + +   + +Q+DL   F   M+  
Sbjct: 71  LRNGIVDIKVNDAIDLFESMIQSRP--LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 128

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
            +E  + T +I++  Y R      A     R  + G  PD I FS +++  C + R SEA
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188

Query: 238 QSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            +  D + + K  PD++  + L+ G C  G +SEA  +   M   G QP+  TY  V++ 
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LC+ G    A D+F +M E   + + + ++ ++    K    +  L ++N+M+  G +AD
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 308

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            +TY+ LI   C DGK +D  K+L  M+ +   P+  TF+ +     K G +  A  +Y 
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M      P+T+TYN L+  F          ++   M     EP++ TY ILI  YC   
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 428

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             ++  +  RE I  K L P +  Y  ++    ++G+L   +EL ++MV RG
Sbjct: 429 RVDDGMRLFRE-ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 479



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 215/441 (48%), Gaps = 14/441 (3%)

Query: 94  LSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--Y 151
           L LGF +    + I        I  +C  R      ++L  F+ +    +  + PD   +
Sbjct: 117 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKK----KLLFAFSVLGRAWKLGYEPDTITF 172

Query: 152 HEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
             ++N   L G+V +   A   +D M        + T S L+      G  +EA+   +R
Sbjct: 173 STLVNGFCLEGRVSE---AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 229

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
           M EYG  PD++ +  V++ LC+   ++ A   F  ++++  +  V+ Y+ ++   C+ G+
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
             +A  +F EM+M GI+ +V TYS +I  LC  G+      +  EM+     P+ +TF+ 
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+ V VK  +  +  ++YN+M   G   DTITYN LID  CK+  L +A ++ + MV KG
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
           C P+  T++++     K   V+   R++ ++      PNT+TYN L+  F  S   +   
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L +EM    V P+V TY IL+   C  G  N A +   +M + + +  G  +Y +++  
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR-MTLGIGIYNIIIHG 528

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
           +  A ++     L   + D+G
Sbjct: 529 MCNASKVDDAWSLFCSLSDKG 549



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 4/392 (1%)

Query: 143 EFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           E+   PD   Y  ++N   K     LA      M+ RN++ +V  +SI++    + G   
Sbjct: 232 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 291

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE-AQSFFDSLKDKFEPDVIVYTNLV 259
           +A+  FN ME  G   D + +S +I  LC   +  + A+   + +     PDV+ ++ L+
Sbjct: 292 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             + + G + EA+ ++ EM   GI P+  TY+ +ID  C+   +  A+ +F  M+  GCE
Sbjct: 352 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 411

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +T++ L+  + KA R +  ++++ ++   G   +TITYN L+   C+ GKL  A ++
Sbjct: 412 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 471

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              MV +G  P+  T+ ++   +   G++N A  ++ KM+  +       YNI++     
Sbjct: 472 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 531

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +   D    L   + +  V+P+V TY ++I   C  G  + A    R+M E+ C  P   
Sbjct: 532 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC-TPDDF 590

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            Y ++++       L    EL+E+M   GF+A
Sbjct: 591 TYNILIRAHLGGSGLISSVELIEEMKVCGFSA 622



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 159/310 (51%), Gaps = 1/310 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           ++D     +  M  RN+   V TFS L+  +V+ G   EA   +N M   G APD I ++
Sbjct: 324 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 383

Query: 223 IVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I   C++    EA   FD +  K  EPD++ Y+ L+  +C+A  + +  R+FRE+   
Sbjct: 384 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 443

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+ PN  TY+ ++   C+ G++  A ++F EM+  G  P+ +T+  L+          K 
Sbjct: 444 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 503

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+++ +M++         YN +I   C   K++DA  +  S+  KG  P+  T+N++   
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K G ++ A  ++ KMK+  C P+  TYNIL++           ++L +EM+      +
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 623

Query: 462 VNTYRILITM 471
            +T +++I M
Sbjct: 624 SSTIKMVIDM 633



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 38/294 (12%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  +  +I++  K  +   A    + M +R +     T++ L+  + +     EA   
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F+ M   GC PD + +SI+I+  C+ +R  +    F  +  K   P+ I Y  LV G+C+
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML---------- 314
           +G ++ A+ +F+EM   G+ P+V TY I++D LC  G++ +A ++F +M           
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521

Query: 315 -------------------------EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
                                    + G +P+ +T+N ++    K     +   ++ +MK
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
             GC  D  TYN LI  H     L  +++++  M   G + ++ST  M+   +S
Sbjct: 582 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 635



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 1/230 (0%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A D+F  M++    P  I FN L     +  + + VL     M+  G E D  T  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+C+C+  KL  A  VL    + G  P+  TF+ +       G V+ A  +  +M ++
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           K  P+ VT + L+            L L   M E   +P+  TY  ++   C  G+   A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
               R+M EE+ +K     Y +V+  L + G       L  +M  +G  A
Sbjct: 259 LDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 307



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 36/197 (18%)

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK-------LG-----DVNG-AHRMY- 415
           D K+ DAI +  SM++    P    FN +   +++       LG     ++NG  H MY 
Sbjct: 77  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 136

Query: 416 ---------------------GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
                                G+   L  EP+T+T++ L+  F         + L   M 
Sbjct: 137 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 196

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           E +  P++ T   LI   C  G  + A   I  M+E    +P    Y  VL +L ++G  
Sbjct: 197 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRLCKSGNS 255

Query: 515 QKHEELVEKMVDRGFTA 531
               +L  KM +R   A
Sbjct: 256 ALALDLFRKMEERNIKA 272


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 189/381 (49%), Gaps = 5/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K   F  A + +D M+++     + T+++++    R G   +A    NR+ 
Sbjct: 179 YTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLS 238

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
            YG  PD ++++ V+  LC  RR  + +  F  + D K  P+ + +  LVR +CR G + 
Sbjct: 239 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 298

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +V ++M   G  PN    +IVI+A+C+ G++  A+D    M   GC P++I++  ++
Sbjct: 299 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 358

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           R   +A R E   ++  +M R  C  + +T+N  I   C+ G +E AIK++  M   GC+
Sbjct: 359 RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCS 418

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
               T+N +       G V+ A  ++    +L CEPNT+TY  L+     ++  D   +L
Sbjct: 419 VGIVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTITYTTLLTGLCHAERLDAAAEL 475

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M + +   N  T+ +L++ +C  G    A + + +M+E  C  P    +  +L  + 
Sbjct: 476 LAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC-TPNLITFNTLLDGIT 534

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           +    ++  EL+  +V +G +
Sbjct: 535 KDCNSEEALELLHGLVSKGVS 555



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 183/366 (50%), Gaps = 7/366 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  R  + +V T+++L+    ++    EA++  + M   GC P+ + ++++I+
Sbjct: 160 ALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIIN 219

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            +CR+ R  +A+   + L    F+PD++ YT +++G C A    + + +F EM      P
Sbjct: 220 GMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 279

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  T+ +++   CR G + RA  V  +M + GC PN+   N ++    K  R +      
Sbjct: 280 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 339

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M   GC  DTI+Y  ++   C+ G+ E A ++L  MVRK C PN  TFN     + + 
Sbjct: 340 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 399

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A ++   M +  C    VTYN L+  F      D  L+L   +     EPN  TY
Sbjct: 400 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITY 456

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQLRRAGQLQKHEELVEKM 524
             L+T  C     + A + +  MI++ C  P ++V + +++    + G +++  ELV +M
Sbjct: 457 TTLLTGLCHAERLDAAAELLAGMIQKDC--PLNAVTFNVLVSFFCQKGFVEEAMELVNQM 514

Query: 525 VDRGFT 530
           ++ G T
Sbjct: 515 MEHGCT 520



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 169/344 (49%), Gaps = 5/344 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ ++R     G   +A+   + M + GC P  + +++++  +C+     EA +  D +
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + K   P+++ Y  ++ G CR G + +A+ +   +   G QP++ +Y+ V+  LC   + 
Sbjct: 203 RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRW 262

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +FAEM++  C PN +TF+ L+R   +    E+ +QV  QM + GC  +T   N +
Sbjct: 263 DDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIV 322

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK G+++DA   LN+M   GCNP+  ++  + R + + G    A  +  +M    C
Sbjct: 323 INAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNC 382

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN VT+N  + +       +  +KL + M E      + TY  L+  +C  G  ++A +
Sbjct: 383 PPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 442

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
               +  E    P +  Y  +L  L  A +L    EL+  M+ +
Sbjct: 443 LFNNLPCE----PNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 175/339 (51%), Gaps = 5/339 (1%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +RR +     AEA          G APD    + +I  LCR+ R S+A     + +    
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 250 P-DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           P DV  Y  LV G+CR G +  A R+   M    + P+ YTY+ +I  LC  G++  A  
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  +ML+ GC+P+ +T+  L+    K+S   + + V ++M+  GC  + +TYN +I+  C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++G+++DA ++LN +   G  P+  ++  + + +      +    ++ +M D KC PN V
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+++L++ F      +  +++ ++M ++   PN     I+I   C  G  ++AY ++  M
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
               C  P +  Y  VL+ L RAG+ +  +EL+ +MV +
Sbjct: 343 GMYGC-NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 380



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 189/412 (45%), Gaps = 35/412 (8%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L    R  D+   F +++  + V   V TF +LVR + R G+   A+    +M ++GC 
Sbjct: 255 GLCAARRWDDVKVLFAEMVDKKCVPNEV-TFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 313

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+    +IVI+ +C++ R  +A  F +++      PD I YT ++RG CRAG    A+ +
Sbjct: 314 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 373

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC---------------- 318
             EM      PN  T++  I  LC+ G I +A  +   M E GC                
Sbjct: 374 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 433

Query: 319 ----------------EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
                           EPN+IT+  L+     A R +   ++   M +  C  + +T+N 
Sbjct: 434 QGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+   C+ G +E+A++++N M+  GC PN  TFN +   I+K  +   A  +   +    
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
              +T+TY+ ++ + +    T+  +++   +++  + P V  Y  ++   C     + A 
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 613

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            +   M+   C+ P  S Y ++++ L   G L++   ++ ++  +G  ++ L
Sbjct: 614 DFFAYMVSNGCM-PNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSL 664



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 163/362 (45%), Gaps = 3/362 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   ++   SR     V   + L+R   R G  ++A       E  G   D  A++ +++
Sbjct: 58  AARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVA 117

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
             CR  R   A+    S+     PD   YT ++RG C  G + +A  +  +M   G QP+
Sbjct: 118 GYCRYGRLDAARRLIASM--PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPS 175

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           V TY+++++A+C+      A +V  EM   GC PN +T+N ++    +  R +   ++ N
Sbjct: 176 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 235

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           ++   G + D ++Y  ++   C   + +D   +   MV K C PN  TF+M+ R   + G
Sbjct: 236 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 295

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V  A ++  +M    C PNT   NI++         D        M      P+  +Y 
Sbjct: 296 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYT 355

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++   C  G W +A + + EM+ + C  P    +   +  L + G +++  +L+E M +
Sbjct: 356 TVLRGLCRAGRWEHAKELLPEMVRKNC-PPNEVTFNTFICILCQKGLIEQAIKLIELMPE 414

Query: 527 RG 528
            G
Sbjct: 415 YG 416



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 153/325 (47%), Gaps = 7/325 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN   K  + D A+ F++ M          +++ ++R   RAG    A      M    
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 381

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P+++ F+  I ILC+K    +A    + + +      ++ Y  LV G+C  G +  A 
Sbjct: 382 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 441

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F  +     +PN  TY+ ++  LC   ++  A ++ A M++  C  N++TFN L+   
Sbjct: 442 ELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFF 498

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +    E+ +++ NQM   GC  + IT+N L+D   KD   E+A+++L+ +V KG + + 
Sbjct: 499 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 558

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T++ +   +S+      A +M   ++D+   P    YN ++        TD  +     
Sbjct: 559 ITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAY 618

Query: 453 MEENEVEPNVNTYRILITMYCGMGH 477
           M  N   PN +TY ILI    G+ H
Sbjct: 619 MVSNGCMPNESTYIILIE---GLAH 640


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 212/414 (51%), Gaps = 12/414 (2%)

Query: 120 CGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMIN---LAGKVRQFDLAWHFIDLMKS 176
           C + H +  + VL     +  +P+ +     ++ +IN   + G++++   A    + M  
Sbjct: 138 CRLNHVVFAISVLGKMFKLGIQPDAIT----FNTLINGRCIEGEIKE---AVGLFNEMVR 190

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R  +  V ++S ++    ++G  + A+    +MEE GC P+ +A++ +I  LC+    ++
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250

Query: 237 AQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A      + D+   PDV+ Y+ ++ G+C  G+++EA  +F EM    + PN  T++I++D
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            LC+ G ++ A  VF  M + G EPN+ T+N LM  +   ++ ++  +V + M   GC  
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
              +YN LI+ +CK  +L++A  +L  M  K   P+  T++ + + + ++G    A  ++
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +M      P+ +TY+ L+         D  LKL K M+E+++EP++  Y ILI      
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA 490

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G    A +   ++  +  ++P    Y ++++ L + G   +  EL  KM D GF
Sbjct: 491 GKLEVAKELFSKLFADG-IQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGF 543



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 6/385 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  V     +   +    K +Q+       + M    V   V + +IL+    R     
Sbjct: 89  RPSVVE----FGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVV 144

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
            A+    +M + G  PD I F+ +I+  C +    EA   F+ + +   +PDVI Y+ ++
Sbjct: 145 FAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVI 204

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C++GN S A ++ R+M+  G +PN+  Y+ +ID+LC+   +  A D+ +EM++ G  
Sbjct: 205 NGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIP 264

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +T++ ++          +   ++N+M       +T+T+  L+D  CK+G + +A  V
Sbjct: 265 PDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCV 324

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
             +M +KG  PNA T+N +         ++ A ++   M D  C P   +YNIL+  +  
Sbjct: 325 FEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCK 384

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +  D    L  EM E E+ P+  TY  L+   C +G    A    +EM     L P   
Sbjct: 385 RRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL-PDLM 443

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
            Y  +L  L + G L +  +L++ M
Sbjct: 444 TYSTLLDGLCKHGHLDEALKLLKSM 468



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 194/400 (48%), Gaps = 9/400 (2%)

Query: 107 ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           IS STV + + KS         LQ+L        +P  V     Y  +I+   K    + 
Sbjct: 198 ISYSTVINGLCKSGNTSMA---LQLLRKMEEKGCKPNLVA----YTTIIDSLCKDTLVND 250

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  M  R +   V T+S ++  +   G   EA   FN M      P+ + F+I++ 
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++   SEA+  F+++  K  EP+   Y  L+ G+C    + EA++V   M   G  P
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            V++Y+I+I+  C+  ++  A  +  EM E    P+++T++ LM+   +  R ++ L ++
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M   G   D +TY+ L+D  CK G L++A+K+L SM      P+   +N++   +   
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA 490

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  ++ K+     +P   TY I+++       +D   +L ++ME++   PN  +Y
Sbjct: 491 GKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSY 550

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            ++I  +      + A + I EM+ ++     SS ++M+L
Sbjct: 551 NVIIQGFLQNQDSSTAIRLIDEMVGKR-FSADSSTFQMLL 589



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 161/331 (48%), Gaps = 5/331 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+ V    + H   +L       + A    + M  RNV     TF+ILV    + G+ +E
Sbjct: 265 PDVVTYSTILHGFCSLG----HLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
           A   F  M + G  P+   ++ ++   C   +  EAQ   D + DK   P V  Y  L+ 
Sbjct: 321 ARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+C+   + EA+ +  EM    + P+  TYS ++  LC+ G+   A ++F EM   G  P
Sbjct: 381 GYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           + +T++ L+    K    ++ L++   M+    E D + YN LI+     GKLE A ++ 
Sbjct: 441 DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELF 500

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + +   G  P   T+ ++ + + K G  + A+ ++ KM+D    PN+ +YN+++Q F  +
Sbjct: 501 SKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQN 560

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           + +   ++L  EM       + +T+++L+ +
Sbjct: 561 QDSSTAIRLIDEMVGKRFSADSSTFQMLLDL 591



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 1/290 (0%)

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           SF+  L+    P V+ +   +    +    S    +  +M + G+  NVY+ +I+I+ LC
Sbjct: 79  SFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLC 138

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           R   +  A  V  +M ++G +P++ITFN L+         ++ + ++N+M R G + D I
Sbjct: 139 RLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVI 198

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           +Y+ +I+  CK G    A+++L  M  KGC PN   +  I   + K   VN A  +  +M
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
            D    P+ VTY+ ++  F +    +    L  EM    V PN  T+ IL+   C  G  
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + A + + E + +K  +P +  Y  ++       Q+ + +++++ MVD+G
Sbjct: 319 SEA-RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 119/227 (52%), Gaps = 4/227 (1%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           VHS   Y+ +IN   K R+ D A   +  M  + +     T+S L++   + G   EA++
Sbjct: 372 VHS---YNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
            F  M   G  PD + +S ++  LC+     EA     S+++ K EPD+++Y  L+ G  
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMF 488

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AG +  A+ +F ++   GIQP + TY+I+I  L + G    A+++F +M + G  PNS 
Sbjct: 489 IAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSC 548

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           ++N +++  ++   +   +++ ++M      AD+ T+  L+D   +D
Sbjct: 549 SYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRD 595


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 194/381 (50%), Gaps = 8/381 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +IN   K  Q D A+  +D MK R V++ V   S L++   R G   EA+  F  M
Sbjct: 113 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 172

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE------PDVIVYTNLVRGWC 263
            E  C+P+ I ++ V++ LC+  R  EA   FD ++ ++E      PDVI Y+ ++   C
Sbjct: 173 GEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALC 231

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A  + +A   F+ M+  G  PNV TYS +ID LC+  + +   ++   M E G   N I
Sbjct: 232 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINII 291

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            FN ++    K    EK  Q + ++ + G + + +TYN  +   CK G++++A ++L  M
Sbjct: 292 DFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEM 351

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V     P+  T++ I     K G ++ A  ++ +M   +C P+ VT+  L+  F+  K +
Sbjct: 352 VESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 411

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
               ++ ++M      P + TY +L+   CG     +A +   +M  +K  +P  + Y  
Sbjct: 412 REAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK-RQPDCNTYAP 470

Query: 504 VLQQLRRAGQLQKHEELVEKM 524
           ++Q L RA ++ + +E ++ M
Sbjct: 471 LIQCLCRARRVDEAKEFLDVM 491



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 192/385 (49%), Gaps = 13/385 (3%)

Query: 156 NLAGKVRQF----DLAWHFIDLMKSR-NVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            +AG+V Q     D+AW F     ++   +    T ++L+  +V+A    EA        
Sbjct: 44  EVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEEL 103

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E  C P++I ++ VI+  C+  +  +A    D +K++  + DV++++ L++G CR G I 
Sbjct: 104 EPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRID 163

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-----GCEPNSIT 324
           EA   F+ M      PNV TY+ V++ LC+  +I  A ++F +M +      GCEP+ I+
Sbjct: 164 EALEQFKSMG-EECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVIS 222

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ ++    KA R +K  + + +M+ +GC  + +TY+ LID  CK  +  + +++L  M 
Sbjct: 223 YSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMK 282

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG   N   FN +   + K  +   A + + ++     +PN VTYN+ +     +   D
Sbjct: 283 EKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVD 342

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              ++  EM E++V P+V TY  +I  +C  G  + A      M+  +C+ P    +  +
Sbjct: 343 EAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI-PHPVTFMTL 401

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           L       + ++   + E MV+ GF
Sbjct: 402 LHGFSEHKKSREAFRVHEDMVNAGF 426



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 195/413 (47%), Gaps = 19/413 (4%)

Query: 130 QVLSFFNWVTARPEFVHS--PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT 185
           + L  F+ +  R E  H   PD+  Y  +I+   K ++ D A+ +   M++      V T
Sbjct: 198 EALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVT 257

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           +S L+    +    +E +     M+E G   + I F+ ++  L +     +A  FF+ L 
Sbjct: 258 YSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 317

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K   +P+V+ Y   V G C+AG + EA R+  EM  + + P+V TYS +ID  C+ G++ 
Sbjct: 318 KSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 377

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A DVF  M+   C P+ +TF  L+    +  ++ +  +V+  M   G      TYN L+
Sbjct: 378 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 437

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           DC C    +E A+++ + M RK   P+ +T+  + +C+ +   V+ A      M+     
Sbjct: 438 DCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVV 497

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN    + L+++       D    +   + E   +P   T++IL+        W  A K 
Sbjct: 498 PNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL 557

Query: 485 IREMIEEKCLKPG----SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +R         PG    ++ Y + + ++ +AG+  +  E++E+MV +G   RP
Sbjct: 558 LR--------SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG--VRP 600



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 145/354 (40%), Gaps = 39/354 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+  ++   K  + D A+  +  M    V   V T+S ++  + +AG   +A   F RM 
Sbjct: 328 YNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 387

Query: 211 EYGCAPDKIAF-----------------------------------SIVISILCRKRRAS 235
            + C P  + F                                   ++++  +C      
Sbjct: 388 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 447

Query: 236 EAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
            A   +  +K  K +PD   Y  L++  CRA  + EA+     M+   + PN      ++
Sbjct: 448 SALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 507

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           + LC+ G++  A  V   ++EVGC+P   TF  L+       + E   ++   ++  G  
Sbjct: 508 EVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFV 564

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
           AD  TY+  +   CK GK ++A++V+  MV KG  P+  T+  + R +  L  V  A   
Sbjct: 565 ADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAE 624

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + KM    C P  VTY +L+    ++   D   ++ + M      P   T R L
Sbjct: 625 FEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 33/257 (12%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           + T+++L+     A     A+  +++M+     PD   ++ +I  LCR RR  EA+ F D
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLD 489

Query: 243 SLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP---------------- 285
            ++ D   P+  +   LV   C+ G + EA  V   +   G QP                
Sbjct: 490 VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRK 549

Query: 286 ----------------NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
                           +  TYS+ +  +C+ G+   A +V  +M+  G  P+  T+  ++
Sbjct: 550 KWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           R      R E  +  + +M   GC    +TY  LI   C     ++A ++  +MV  G  
Sbjct: 610 RSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFT 669

Query: 390 PNASTFNMIFRCISKLG 406
           P A T   +  C+   G
Sbjct: 670 PQAQTMRTLSSCLRDAG 686


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 202/412 (49%), Gaps = 8/412 (1%)

Query: 122 VRHGIPLLQVLS----FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
           +R+GI  ++V      F + + +RP  + +P  ++ + +   + +Q+DL   F   M+  
Sbjct: 42  LRNGIVDIKVNDAIDLFESMIQSRP--LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
            +E  + T +I++  Y R      A     R  + G  PD I FS +++  C + R SEA
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159

Query: 238 QSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            +  D + + K  PD++  + L+ G C  G +SEA  +   M   G QP+  TY  V++ 
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LC+ G    A D+F +M E   + + + ++ ++    K    +  L ++N+M+  G +AD
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            +TY+ LI   C DGK +D  K+L  M+ +   P+  TF+ +     K G +  A  +Y 
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M      P+T+TYN L+  F          ++   M     EP++ TY ILI  YC   
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             ++  +  RE I  K L P +  Y  ++    ++G+L   +EL ++MV RG
Sbjct: 400 RVDDGMRLFRE-ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 215/441 (48%), Gaps = 14/441 (3%)

Query: 94  LSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--Y 151
           L LGF +    + I        I  +C  R      ++L  F+ +    +  + PD   +
Sbjct: 88  LVLGFCKGMELNGIEHDMYTMTIMINCYCRKK----KLLFAFSVLGRAWKLGYEPDTITF 143

Query: 152 HEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
             ++N   L G+V +   A   +D M        + T S L+      G  +EA+   +R
Sbjct: 144 STLVNGFCLEGRVSE---AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
           M EYG  PD++ +  V++ LC+   ++ A   F  ++++  +  V+ Y+ ++   C+ G+
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
             +A  +F EM+M GI+ +V TYS +I  LC  G+      +  EM+     P+ +TF+ 
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+ V VK  +  +  ++YN+M   G   DTITYN LID  CK+  L +A ++ + MV KG
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
           C P+  T++++     K   V+   R++ ++      PNT+TYN L+  F  S   +   
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L +EM    V P+V TY IL+   C  G  N A +   +M + + +  G  +Y +++  
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR-MTLGIGIYNIIIHG 499

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
           +  A ++     L   + D+G
Sbjct: 500 MCNASKVDDAWSLFCSLSDKG 520



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 4/392 (1%)

Query: 143 EFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           E+   PD   Y  ++N   K     LA      M+ RN++ +V  +SI++    + G   
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE-AQSFFDSLKDKFEPDVIVYTNLV 259
           +A+  FN ME  G   D + +S +I  LC   +  + A+   + +     PDV+ ++ L+
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             + + G + EA+ ++ EM   GI P+  TY+ +ID  C+   +  A+ +F  M+  GCE
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +T++ L+  + KA R +  ++++ ++   G   +TITYN L+   C+ GKL  A ++
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              MV +G  P+  T+ ++   +   G++N A  ++ KM+  +       YNI++     
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +   D    L   + +  V+P+V TY ++I   C  G  + A    R+M E+ C  P   
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC-TPDDF 561

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            Y ++++       L    EL+E+M   GF+A
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 1/299 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  RN+   V TFS L+  +V+ G   EA   +N M   G APD I ++ +I   C++  
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   FD +  K  EPD++ Y+ L+  +C+A  + +  R+FRE+   G+ PN  TY+ 
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++   C+ G++  A ++F EM+  G  P+ +T+  L+          K L+++ +M++  
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                  YN +I   C   K++DA  +  S+  KG  P+  T+N++   + K G ++ A 
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            ++ KMK+  C P+  TYNIL++           ++L +EM+      + +T +++I M
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 38/294 (12%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  +  +I++  K  +   A    + M +R +     T++ L+  + +     EA   
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F+ M   GC PD + +SI+I+  C+ +R  +    F  +  K   P+ I Y  LV G+C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML---------- 314
           +G ++ A+ +F+EM   G+ P+V TY I++D LC  G++ +A ++F +M           
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492

Query: 315 -------------------------EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
                                    + G +P+ +T+N ++    K     +   ++ +MK
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
             GC  D  TYN LI  H     L  +++++  M   G + ++ST  M+   +S
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 1/230 (0%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A D+F  M++    P  I FN L     +  + + VL     M+  G E D  T  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+C+C+  KL  A  VL    + G  P+  TF+ +       G V+ A  +  +M ++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           K  P+ VT + L+            L L   M E   +P+  TY  ++   C  G+   A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
               R+M EE+ +K     Y +V+  L + G       L  +M  +G  A
Sbjct: 230 LDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 36/197 (18%)

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK-------LG-----DVNG-AHRMY- 415
           D K+ DAI +  SM++    P    FN +   +++       LG     ++NG  H MY 
Sbjct: 48  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107

Query: 416 ---------------------GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
                                G+   L  EP+T+T++ L+  F         + L   M 
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           E +  P++ T   LI   C  G  + A   I  M+E    +P    Y  VL +L ++G  
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRLCKSGNS 226

Query: 515 QKHEELVEKMVDRGFTA 531
               +L  KM +R   A
Sbjct: 227 ALALDLFRKMEERNIKA 243


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 191/380 (50%), Gaps = 3/380 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y++M+N   K+   + A  ++  +    ++    T++ L+  Y +      A   FN M 
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             GC  +++A++ +I  LC  RR  EA   F  +K D+  P V  YT L++  C +   S
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  + +EM+  GI+PN++TY+++ID+LC   +  +A ++  +MLE G  PN IT+N L+
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K    E  + V   M+      +T TYN LI  +CK   +  A+ VLN M+ +   
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N +     + G+ + A+R+   M D    P+  TY  ++     SK  +    L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +E+  V PNV  Y  LI  YC  G  + A+  + +M+ + CL P S  +  ++  L 
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLC 578

Query: 510 RAGQLQKHEELVEKMVDRGF 529
             G+L++   L EKMV  G 
Sbjct: 579 ADGKLKEATLLEEKMVKIGL 598



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 199/434 (45%), Gaps = 23/434 (5%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  CG       L ++        +P  +H+   Y  +I+      +F+ A   +  M
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPN-IHT---YTVLIDSLCSQCKFEKARELLGQM 384

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             + +   V T++ L+  Y + G+  +AV     ME    +P+   ++ +I   C+    
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444

Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                    L+ K  PDV+ Y +L+ G CR+GN   A R+   M   G+ P+ +TY+ +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           D+LC+  ++  A D+F  + + G  PN + +  L+  + KA + ++   +  +M    C 
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            +++T+N LI   C DGKL++A  +   MV+ G  P  ST  ++   + K GD + A+  
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M     +P+  TY   +Q +           +  +M EN V P++ TY  LI  Y  
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL--RRAGQLQKHE-------------- 518
           +G  N A+  ++ M +  C +P    +  +++ L   + G+ +  E              
Sbjct: 685 LGQTNFAFDVLKRMRDTGC-EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743

Query: 519 --ELVEKMVDRGFT 530
             EL+EKMV+   T
Sbjct: 744 VVELLEKMVEHSVT 757



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 186/432 (43%), Gaps = 23/432 (5%)

Query: 102 STAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           S   +ISPS V  +       +        L+F +W++  P + HS   Y  ++ L    
Sbjct: 83  SMVSAISPSHVSSLFSLDLDPK------TALNFSHWISQNPRYKHSVYSYASLLTLLINN 136

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI-- 219
               + +  I L+  ++ +   D   +L           +     N+ E +      I  
Sbjct: 137 GYVGVVFK-IRLLMIKSCDSVGDALYVL-----------DLCRKMNKDERFELKYKLIIG 184

Query: 220 AFSIVISILCRKRRASE-AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++ +++ L R     E  Q + + L+DK  P++  Y  +V G+C+ GN+ EA +   ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
             AG+ P+ +TY+ +I   C+   +  A  VF EM   GC  N + + +L+     A R 
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           ++ + ++ +MK   C     TY  LI   C   +  +A+ ++  M   G  PN  T+ ++
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              +        A  + G+M +    PN +TYN L+  +      +  + + + ME  ++
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            PN  TY  LI  YC   + + A   + +M+E K L P    Y  ++    R+G      
Sbjct: 425 SPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDSAY 482

Query: 519 ELVEKMVDRGFT 530
            L+  M DRG  
Sbjct: 483 RLLSLMNDRGLV 494



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/409 (21%), Positives = 155/409 (37%), Gaps = 90/409 (22%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MI+   K ++ + A    D ++ + V   V  ++ L+  Y +AG   EA     +M 
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSF----------------------------FD 242
              C P+ + F+ +I  LC   +  EA                               FD
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619

Query: 243 SLKDKFE--------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
               +F+        PD   YT  ++ +CR G + +AE +  +M+  G+ P+++TYS +I
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR------------------------ 330
                 GQ   A DV   M + GCEP+  TF +L++                        
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739

Query: 331 ----------------VHVKASRTEKVL-------------QVYNQMKR-LGCEADTITY 360
                           V   A   EK++             +V++ M+R  G     + +
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N L+ C CK  K  +A KV++ M+  G  P   +  ++   + K G+      ++  +  
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                + + + I++         +   +L   ME+N  + +  TY +LI
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 22/241 (9%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE--- 201
           SPDL  Y  +I   G + Q + A+  +  M+    E +  TF  L++  +      +   
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728

Query: 202 ---------------AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK- 245
                           V    +M E+   P+  ++  +I  +C       A+  FD ++ 
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788

Query: 246 -DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            +   P  +V+  L+   C+    +EA +V  +M   G  P + +  ++I  L + G+  
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           R   VF  +L+ G   + + +  ++    K    E   +++N M++ GC+  + TY+ LI
Sbjct: 849 RGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908

Query: 365 D 365
           +
Sbjct: 909 E 909


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 184/367 (50%), Gaps = 10/367 (2%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D+A HF           TV T+S L+    R     +       M   GCAP+ + ++ +
Sbjct: 90  DMAIHF-------GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTL 142

Query: 225 ISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM--A 281
           ++ L  + R+ EA S  + +  +   P++I +  +++G C+ G I  A RV  EM M  +
Sbjct: 143 VNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIES 202

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+ P+V T++ V+D LC+  +I  AH+VF   LE GC PN +T++ L+    K ++ ++ 
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 262

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           LQ+  +M  LGC A+T+TY+ ++D   K G++EDA+ VL  M   GC P+A T+N +   
Sbjct: 263 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 322

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             K   +  A  +  +M +    P+ VTY  L      S   D  +++   M      PN
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             TY  ++   C  G    A  Y  +M  ++ + P    Y  ++  L +AG++ +  E +
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442

Query: 522 EKMVDRG 528
           E+M+  G
Sbjct: 443 ERMIRAG 449



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 40/419 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   +  + D     ++ M  R       T++ LV   +  G + EA     +M 
Sbjct: 104 YSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMA 163

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL---KDKFEPDVIVYTNLVRGWCRAGN 267
             GC P+ I F ++I  LC++     A    D +   +    PDVI + +++ G C+   
Sbjct: 164 ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQR 223

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           I +A  VF+     G +PNV TYS +ID L +  ++  A  + A+M+E+GC  N++T++ 
Sbjct: 224 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 283

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID---------------------- 365
           ++   +K  R E  + V  QM+  GC  D +TYN LID                      
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343

Query: 366 -----------CH--CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                      CH  C+ G+ ++A+++L+ M  +GC PNA T++ I   + K G V  A 
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403

Query: 413 RMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             + KM +D    P+ + Y+ L+     +   D   +  + M      P+V T+ ILI  
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILING 463

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            C  G  +   +  R M E  C+ P    Y  ++ +L RA ++ +  +L ++M   G +
Sbjct: 464 LCDAGRIDTGLELFRGMAERGCV-PDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLS 521



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 177/380 (46%), Gaps = 7/380 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MI+   K R+ D A      M  + +   V T+  L+    +     EA   F      G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVRGWCRAGNISEA 271
           C P  + ++ +I  LC+  R   A + +D +     F P V+ Y+ L+ G CR   + + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            ++  EM   G  PN  TY+ +++AL   G+   A  +  +M   GC P  ITF  +++ 
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 332 HVKASRTEKVLQVYNQMKRL--GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             K    E   +V ++M  +  G   D IT+N ++D  CK+ ++ DA  V    + +GC 
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDMVLK 448
           PN  T++ +   +SK+  ++ A ++  KM +L C  NTVTY+ ++  +    +  D V+ 
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L ++M +    P+  TY  LI  +        A   +REM+E     P    Y  +   L
Sbjct: 301 L-RQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG-FHPSVVTYTTLCHGL 358

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            R+G+  +  E+++ M  RG
Sbjct: 359 CRSGRFDEAVEILDYMAARG 378



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 144/295 (48%), Gaps = 2/295 (0%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R     V T+S L+    +     EA+    +M E GC  + + +S V+  L +  R  +
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 237 AQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A      ++D    PD + Y  L+ G+ +   + EA  + REM  AG  P+V TY+ +  
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            LCR G+   A ++   M   GC PN+IT+++++    KA R  + L  + +M R    A
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416

Query: 356 -DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
              I Y+ LID  CK GK+++A + L  M+R G  P+  TF+++   +   G ++    +
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 476

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
           +  M +  C P+ VTY  L+     +   D    L ++M  + + P+ +T R +I
Sbjct: 477 FRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 141/298 (47%), Gaps = 8/298 (2%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  V     Y  +I+   K+ + D A   +  M          T+S +V   ++ G   
Sbjct: 240 RPNVVT----YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLV 259
           +AV    +M + GC PD + ++ +I    +++R  EA     + L+  F P V+ YT L 
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML--EVG 317
            G CR+G   EA  +   M   G  PN  TYS ++D LC+ G++T A   F +M   EV 
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV- 414

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P+ I ++ L+    KA + ++  +   +M R G   D +T++ LI+  C  G+++  +
Sbjct: 415 VAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 474

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           ++   M  +GC P+  T+  +   + +   V+ A  ++ +M+     P+  T   ++ 
Sbjct: 475 ELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIH 532



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 135/277 (48%), Gaps = 4/277 (1%)

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++ G C++  + +A  +F++M    I P+V TY  +ID L +  ++  A+D+F E    G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMK-RLGCEADTITYNFLIDCHCKDGKLEDA 376
           C P  +T+N ++    K  R E  L +Y+ M    G     +TY+ LID  C+D +++  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            K+L  M  +GC PNA T+N +   +   G    A  +  +M    C P  +T+ ++++ 
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 437 FATSKSTDMVLKLKKE--MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                  +   ++  E  M E+ + P+V T+  ++   C      +A+   +  +E  C 
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC- 239

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           +P    Y  ++  L +  ++ +  +L+ KMV+ G  A
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 276



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 2/231 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K ++   A   +  M       +V T++ L     R+G   EAV   + M 
Sbjct: 316 YNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMA 375

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGNI 268
             GCAP+ I +S ++  LC+  R +EA  +F+ +   +   P VI Y+ L+ G C+AG I
Sbjct: 376 ARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKI 435

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA      M  AG  P+V T+SI+I+ LC  G+I    ++F  M E GC P+ +T+  L
Sbjct: 436 DEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATL 495

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           +    +ASR ++   ++ QM+  G   D  T   +I    +  + EDA ++
Sbjct: 496 VDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 2/187 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYGCAPDKIAF 221
           +FD A   +D M +R       T+S +V    +AG   EA+  F +M  +   AP  IA+
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 422

Query: 222 SIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           S +I  LC+  +  EA  F + + +    PDV+ ++ L+ G C AG I     +FR M  
Sbjct: 423 SALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P++ TY+ ++D LCR  ++  A D+F +M   G  P+  T   ++   ++ +R E 
Sbjct: 483 RGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDED 542

Query: 341 VLQVYNQ 347
             ++ ++
Sbjct: 543 AKRIQDE 549


>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 712

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 208/418 (49%), Gaps = 20/418 (4%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVDTFSI 188
           L FF+WV  +  F H    +  M+   G+ R  + A +F+  ++ R+   V++    F+ 
Sbjct: 88  LRFFDWVYNKG-FSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNS 146

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+R Y  AGL  E+V+ F  M++ G +P  + F+ ++SIL ++ R   A   FD ++  +
Sbjct: 147 LIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTY 206

Query: 249 --EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PD   +  L+ G+C+   + +A  +F+EM++    P+V TY+ +ID LCR G++  A
Sbjct: 207 GVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIA 266

Query: 307 HDVFAEMLE--VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           H++   ML+      PN +++  L+R +      ++ L V+++M   G + + +TYN LI
Sbjct: 267 HNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLI 326

Query: 365 DCHCKDGKLEDAIK--VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
                +    D IK  ++        +P+A TFN++ +     G ++ A +++ +M ++K
Sbjct: 327 K-GLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 385

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE-------NEVEPNVNTYRILITMYCGM 475
             P++ +Y++L++        D    L  E+ E       NE +P    Y ++    C  
Sbjct: 386 LHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCAN 445

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           G    A K  R++++     P S  Y  ++  L R G+ +   EL+  M+ R F   P
Sbjct: 446 GKAKQAEKVFRQLMKRGAQDPSS--YRTLITGLCREGKFKAAYELLVLMLRREFVPDP 501



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 150/318 (47%), Gaps = 17/318 (5%)

Query: 158 AGKVRQFDLAWHFID--LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           AGKV+   +A + ++  L K+  V   + +++ L+R Y       EA+  F+ M   G  
Sbjct: 260 AGKVK---IAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLK 316

Query: 216 PDKIAFSIVISILCRKRRASEAQSFF---DSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           P+ + ++ +I  L    R  E + F    D+    F PD   +  L++  C AG++  A 
Sbjct: 317 PNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTT-FSPDACTFNILIKAHCDAGHLDAAM 375

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE----VG---CEPNSITF 325
           +VF+EM    + P+  +YS++I  LC   +  +A  +F E+ E    +G   C+P +  +
Sbjct: 376 KVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAY 435

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N +        + ++  +V+ Q+ + G + D  +Y  LI   C++GK + A ++L  M+R
Sbjct: 436 NLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLVLMLR 494

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +   P+  T+ ++   + K+G+   AH    +M      P   T++ ++      K  + 
Sbjct: 495 REFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFAND 554

Query: 446 VLKLKKEMEENEVEPNVN 463
              L   M E  +  N++
Sbjct: 555 SFGLLTVMLEKRIRQNID 572



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 4/208 (1%)

Query: 146 HSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
             P  Y  +I    +  +F  A+  + LM  R      +T+ +L+   ++ G A  A   
Sbjct: 464 QDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDT 523

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
             RM      P    F  V++ L +++ A+++       L+ +   ++ + T  VR    
Sbjct: 524 LQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVR---L 580

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             + ++ E+ F  +++      +     ++D LC   ++  AH +    LE     +  T
Sbjct: 581 VFSSAQKEKAFLIVRLLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDT 640

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLG 352
            N ++    K  R  +   +YN++  LG
Sbjct: 641 CNTIIEGLCKHKRHSEAFSLYNELVELG 668


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 178/411 (43%), Gaps = 12/411 (2%)

Query: 123 RHGIPLLQVLSFFNWV----TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN 178
           R G P   + +F+  V     ARP     P LY+ +I+   +           D M+   
Sbjct: 102 RAGAPDRALKTFYRAVHDLGCARPT---EPRLYNHLIDALLRENMVGAVVLVYDNMRKDG 158

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           V   V T+++LVR   +      A    + M   GC PD + ++ ++S+LC+  R  EA 
Sbjct: 159 VHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEAT 218

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
               ++     P    Y  +V   CR   + E   V  +M   G+QPNV TY+ ++DA C
Sbjct: 219 EVLAAMP----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFC 274

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           + G++  A  + A M+  GC PN +TF  L+R      R    L ++  M   G    T+
Sbjct: 275 KAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTV 334

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           +YN LI   C  G L+ A  +LNSM + GC PN  T++ +    SK GD+ GA  ++  M
Sbjct: 335 SYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 394

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
               C+PN V Y  ++ +F      +    L  +M      PN  T+  LI   C     
Sbjct: 395 SRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRV 454

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             A     EM    C+ P    Y  ++  L R G       +V +M   G 
Sbjct: 455 GRALGVFHEMRRHGCV-PNGRTYNELIHGLFREGNCGDALHMVTEMQSHGI 504



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 3/287 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++IL+R     G    A    N ME++GC P+   +S +I    +      A S ++ +
Sbjct: 335 SYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 394

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +   +P+V+VYTN+V  +C+    ++A+ +  +M +    PN  T++ +I +LC C ++
Sbjct: 395 SRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRV 454

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            RA  VF EM   GC PN  T+N L+    +       L +  +M+  G E   +TYN +
Sbjct: 455 GRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTV 514

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +   C+     +A+  +  M+ +G  PNA TF+ I     K G+V  A  M G M  + C
Sbjct: 515 VSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNC 574

Query: 424 EPNTVTYNILM-QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             N + Y ILM ++    K  D +  L K + E  + PN  T+ +L+
Sbjct: 575 HRNILVYTILMAELCNQDKLVDAMTYLLKMLYEG-IYPNTVTWNVLV 620



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 53/342 (15%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L  + W+ A   +  S   Y+ +I     V     A   ++ M+       V T+S L+ 
Sbjct: 318 LDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 376

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEP 250
            + +AG    A+  +N M   GC P+ + ++ ++ + C+K   ++A+S  D  L +   P
Sbjct: 377 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 436

Query: 251 DVIVYTNLVRGWC-----------------------------------RAGNISEAERVF 275
           + + +  L+R  C                                   R GN  +A  + 
Sbjct: 437 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 496

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM+  GI+ ++ TY+ V+  LC+      A     +M+  G +PN+ TF+ ++  + K 
Sbjct: 497 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 556

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
                   +   M  + C  + + Y  L+   C   KL DA+  L  M+ +G  PN  T+
Sbjct: 557 GEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 616

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKC-EPNTVTYNILMQM 436
           N++ R               G  ++L C EP+    +I M +
Sbjct: 617 NVLVR---------------GVFRNLGCIEPSDFIQHITMNL 643



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 13/277 (4%)

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-EVG 317
           VR    AG++   +   +EM++ G+          + A  R G   RA   F   + ++G
Sbjct: 62  VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 121

Query: 318 C----EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           C    EP    +N+L+   ++ +    V+ VY+ M++ G   +  TYN L+   C++ ++
Sbjct: 122 CARPTEPR--LYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRV 179

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A K+L+ M RKGC P+  T+  I   + KL  ++ A  +   M      P   +YN +
Sbjct: 180 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAI 234

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +           V  +  +M    ++PNV TY  ++  +C  G    A   +  M+   C
Sbjct: 235 VLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGC 294

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             P    +  +++ L   G++    ++   MV  G+ 
Sbjct: 295 -TPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWA 330


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 190/403 (47%), Gaps = 37/403 (9%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           +D AW     M    V   V +F+IL+  + R G   EA+  +  M   G  PD ++FS 
Sbjct: 242 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 301

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I +  R+ +   A ++   ++     PD ++YT ++ G+CRAG +S+A RV  EM   G
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P+V TY+ +++ LC+  ++  A  +  EM E G  P+  TF  L+  +    + +K L
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 421

Query: 343 QVYNQMKRLGCEADTITYN-----------------------------------FLIDCH 367
           Q+++ M       D +TYN                                    LID H
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C+ G++EDA   L+ M+ KG  PN  T+N I +   + G+V+   +   KM   K  P+ 
Sbjct: 482 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 541

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           +TYN L+  +          KL   ME+ +V+P+V TY +LI  +   G+   A  +I E
Sbjct: 542 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA-GWIFE 600

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +  K ++P    Y  ++     AG  ++  +L ++M+ RGF 
Sbjct: 601 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFA 643



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 182/367 (49%), Gaps = 2/367 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  +FD     I  M+ R V   V T +++V    RAG A  A+   + M   G  P  +
Sbjct: 168 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIV 227

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++ V+  LCR     +A   F  + D    PDV  +T L+ G+CR G I EA ++++EM
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 287

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  GI+P++ ++S +I    R G++  A     EM   G  P+ + +  ++    +A   
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 347

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
              L+V ++M   GC  D +TYN L++  CK+ +L DA  +LN M  +G  P+  TF  +
Sbjct: 348 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 407

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                  G ++ A +++  M + +  P+ VTYN L+         D    L  +M   E+
Sbjct: 408 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 467

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            PN  TY ILI  +C  G   +A+ ++ EMI +  L P    Y  +++   R+G + K +
Sbjct: 468 FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL-PNIMTYNSIIKGYCRSGNVSKGQ 526

Query: 519 ELVEKMV 525
           + ++KM+
Sbjct: 527 KFLQKMM 533



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 191/380 (50%), Gaps = 4/380 (1%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    + +  + R  D   A   +D M S+ ++  + T++ +++   R+G+  +A   
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 248

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M+++G APD  +F+I+I   CR     EA   +  ++ +  +PD++ ++ L+  + R
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A    REM+  G+ P+   Y++VI   CR G ++ A  V  EM+  GC P+ +T
Sbjct: 309 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 368

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K  R      + N+M+  G   D  T+  LI  +C +GKL+ A+++ ++M+
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +   P+  T+N +   + + GD++ A+ ++  M   +  PN VTY+IL+         +
Sbjct: 429 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
                  EM    + PN+ TY  +I  YC  G+ +   K++++M+  K + P    Y  +
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTL 547

Query: 505 LQQLRRAGQLQKHEELVEKM 524
           +    +  ++    +L+  M
Sbjct: 548 IHGYIKEDKMHDAFKLLNMM 567



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 167/352 (47%), Gaps = 38/352 (10%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  +I L  +  + D A  ++  M+   +      +++++  + RAGL ++A+  
Sbjct: 294 PDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRV 353

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------ 247
            + M   GC PD + ++ +++ LC++RR  +A+   + ++++                  
Sbjct: 354 RDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCI 413

Query: 248 ------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                               PD++ Y  L+ G CR G++ +A  ++ +M    I PN  T
Sbjct: 414 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 473

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           YSI+ID+ C  GQ+  A     EM+  G  PN +T+N++++ + ++    K  +   +M 
Sbjct: 474 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
                 D ITYN LI  + K+ K+ DA K+LN M ++   P+  T+NM+    S  G+V 
Sbjct: 534 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 593

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
            A  ++ KM     EP+  TY  ++    T+ ++    +L  EM +    P+
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 5/303 (1%)

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           + R+R A   +     L     P   V+  L+R + ++    EA   FR +    +    
Sbjct: 62  MSRRRGACRREIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPA 121

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
              + ++ AL R G    A D +  +     E N+ T N ++  + KA   +KV  V ++
Sbjct: 122 AASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISE 181

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M++     D +T+N ++D   + G  E A+ +++SMV KG  P   T+N + + + + G 
Sbjct: 182 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 241

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            + A  ++ +M D    P+  ++ IL+  F      +  LK+ KEM    ++P++ ++  
Sbjct: 242 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 301

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKC--LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           LI ++   G  ++A  Y+REM   +C  L P   +Y MV+    RAG +     + ++MV
Sbjct: 302 LIGLFARRGKMDHAMAYLREM---RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 358

Query: 526 DRG 528
             G
Sbjct: 359 GCG 361



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 2/315 (0%)

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAER 273
            P    F ++I    + R+  EA   F  + D   P        L+    RAG    A  
Sbjct: 83  TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 142

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
            +R +  +  + N YT +I++   C+  +  +   V +EM +    P+ +T N ++    
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           +A   E  + + + M   G +   +TYN ++   C+ G  + A +V   M   G  P+  
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           +F ++     ++G++  A ++Y +M+    +P+ V+++ L+ +FA     D  +   +EM
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
               + P+   Y ++I  +C  G  ++A +   EM+   CL P    Y  +L  L +  +
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL-PDVVTYNTLLNGLCKERR 381

Query: 514 LQKHEELVEKMVDRG 528
           L   E L+ +M +RG
Sbjct: 382 LLDAEGLLNEMRERG 396


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 193/381 (50%), Gaps = 3/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA-FNRM 209
           Y+ ++N   K  +   A      M  +  E  V T+S ++    + G   EA+   F++M
Sbjct: 81  YNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM 140

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E GC+ + +A++ +I+ LC+      A    + +  K + PD I Y  ++ G CR G +
Sbjct: 141 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKV 200

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           SEA++ F  M   G  P+V  Y+ ++DAL + G+   A  +F +++  G  P+++T+N++
Sbjct: 201 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSI 260

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    + S  ++  +++ +M   GC  +  TY+ ++  HC+  K++DA KVL  M + G 
Sbjct: 261 LLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGA 320

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N++   + K   V+ AH ++  M D  C P+ V+Y++++     +        
Sbjct: 321 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 380

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L   M E ++ P+V T+ IL+   C  G  + A   + +M    C  P    Y  ++  L
Sbjct: 381 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC-APDYVAYNTLMNGL 439

Query: 509 RRAGQLQKHEELVEKMVDRGF 529
           R+ G+  + + L + M ++GF
Sbjct: 440 RKQGRHIQADRLTQAMKEKGF 460



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 193/386 (50%), Gaps = 5/386 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y+ +I+   K  + D A    + M S  +E ++ T++ L+  + +     EA+ 
Sbjct: 40  SPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAME 99

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS--FFDSLKDKFEPDVIVYTNLVRGW 262
            F  M E G  PD + +S +IS LC+  + +EA    F   ++     + + Y  L+ G 
Sbjct: 100 LFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGL 159

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+  NI  A ++  EM   G  P+  TY+ ++  LCR G+++ A   F  M   G  P+ 
Sbjct: 160 CKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDV 219

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + +N L+    K  +T++ ++++  +   G   DT+TYN ++    +   +++A ++   
Sbjct: 220 VAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 279

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           MV  GC PN +T++++     +   V+ AH++  +M  +   P+ VTYNIL+     +  
Sbjct: 280 MVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 339

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D   +L   M +N   P++ +Y +++   C     ++A      MIE K L P    + 
Sbjct: 340 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK-LVPDVVTFN 398

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
           +++  L +AG+L + ++L+++M   G
Sbjct: 399 ILMDGLCKAGKLDEAKDLLDQMTCSG 424



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 166/317 (52%), Gaps = 3/317 (0%)

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           C+P++  F +V+   C++ +  +    F+ + D    PD I Y  L+ G+ + G + EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R++ EM   G++P++YTY+ +++A C+  ++  A ++F  M E G EP+ +T++ ++   
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 333 VKASR-TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
            K  + TE +  ++++M   GC A+T+ YN LI+  CKD  +E A K+L  M  KG  P+
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+N I   + ++G V+ A + +  M      P+ V YN L+        TD  +KL K
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           ++      P+  TY  ++       + + A +  ++M+   C  P  + Y +VL    RA
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGC-APNGATYSIVLSGHCRA 302

Query: 512 GQLQKHEELVEKMVDRG 528
            ++    +++E+M   G
Sbjct: 303 KKVDDAHKVLEEMSKIG 319



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 128/246 (52%), Gaps = 2/246 (0%)

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PN YT+ +V+ + C+ G++   + +F +ML+ G  P+ I +N L+  + K  R ++  ++
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           Y +M  +G E    TYN L++  CK+ K+++A+++  +M  KG  P+  T++ I   + K
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 405 LGDVNGAHRM-YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
            G V  A  M + KM +  C  NTV YN L+      ++ +   KL +EM      P+  
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY  +++  C MG  + A ++   M   +   P    Y  +L  L + G+  +  +L + 
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSM-PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 524 MVDRGF 529
           ++ +G+
Sbjct: 245 VIAKGY 250



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 15/240 (6%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           + +  F  V A+    + PD   Y+ ++    +    D A      M +        T+S
Sbjct: 237 EAMKLFKDVIAKG---YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYS 293

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           I++  + RA    +A      M + G  PD + ++I++  LC+     +A   F ++ D 
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 353

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PD++ Y+ ++ G C+   + +A  +F  M    + P+V T++I++D LC+ G++  A
Sbjct: 354 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 413

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            D+  +M   GC P+ + +N LM    K  R  +  ++   MK  G         FL DC
Sbjct: 414 KDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG---------FLSDC 464



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 2/178 (1%)

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C  +  T+  ++   CK GKL D  K+   M+  G +P+   +N++    +K G V+ A+
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           R+Y +M  +  EP+  TYN L+  F         ++L K M E   EP+V TY  +I+  
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 473 CGMGHWNNAYKYI-REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C  G    A + +  +MIE  C    +  Y  ++  L +   +++  +L+E+M  +G+
Sbjct: 124 CKTGKVTEALEMLFHKMIERGC-SANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA   +  M+   +E  V  ++ ++    +     +A   
Sbjct: 219 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDL 278

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           FN+ME  G  PD   ++ +IS LC   R S+A     D ++ K  P+V+ + +L+  + +
Sbjct: 279 FNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAK 338

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE++F EM    I PN+ TY+ +I+  C   ++  A  +F  M+   C P+ +T
Sbjct: 339 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 398

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++   KA R E+ ++++ +M + G   +T+TYN LI    + G  + A K+   MV
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T++++   + K G +  A  ++  ++  K EPN  TYNI+++    +   +
Sbjct: 459 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVE 518

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+PNV  Y  +I+ +C  G    A    REM E+  L P S  Y  +
Sbjct: 519 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PDSGCYNTL 577

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G      EL+++M   GF  
Sbjct: 578 IRARLRDGDKAASAELIKEMRSCGFVG 604



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 184/355 (51%), Gaps = 2/355 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M     +    TF+ L+        A+EAV   +RM   GC PD   +  V++
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A S    + K K E +V++Y  ++ G C+  ++ +A  +F +M+  GI+P
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V+TY+ +I  LC  G+ + A  + ++M+E    PN +TFN+L+    K  +  +  +++
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 349

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M +   + + +TYN LI+  C   +L++A ++   MV K C P+  T+N + +   K 
Sbjct: 350 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             V     ++ +M       NTVTYN L+Q    +   DM  K+ K+M  + V P++ TY
Sbjct: 410 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 469

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            IL+   C  G    A   + E +++  ++P    Y ++++ + +AG+++   +L
Sbjct: 470 SILLDGLCKYGKLEKAL-VVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDL 523



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 199/427 (46%), Gaps = 11/427 (2%)

Query: 110 STVRHVIEKSCGVRHGIPLLQ-VLSFFNWVTARPEFVHSPDL-YHEMINLAG--KVRQFD 165
           ST +  + +S  VR     +   LSFF W   R  F       Y E ++  G  +++  D
Sbjct: 9   STAKRFVHRSLVVRGNAATVSPSLSFF-W---RRAFSGKTSYDYREKLSRNGLSELKLDD 64

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
               F +++KSR     ++ FS L+    +       +    +M+  G   +   +SI++
Sbjct: 65  AVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILL 123

Query: 226 SILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           +  CR+ +   A +    + K  +EPD++  ++L+ G+C    ISEA  +  +M   G +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYK 183

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+  T++ +I  L    + + A  +   M+  GC+P+  T+  ++    K    +  L +
Sbjct: 184 PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 243

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +M++   EA+ + YN +ID  CK   ++DA  + N M  KG  P+  T+N +  C+  
Sbjct: 244 LKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCN 303

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G  + A R+   M + K  PN VT+N L+  FA         KL  EM +  ++PN+ T
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 363

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI  +C     + A +    M+ + CL P    Y  +++   +A ++++  EL  +M
Sbjct: 364 YNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLIKGFCKAKRVEEGMELFREM 422

Query: 525 VDRGFTA 531
             RG   
Sbjct: 423 SQRGLVG 429



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 179/369 (48%), Gaps = 5/369 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+   K +  D A+   + M+++ ++  V T++ L+      G  ++A    + M
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM 317

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E    P+ + F+ +I    ++ +  EA+  FD +  +  +P+++ Y +L+ G+C    +
Sbjct: 318 IERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 377

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+++F  M      P+V TY+ +I   C+  ++    ++F EM + G   N++T+N L
Sbjct: 378 DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 437

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   +A   +   +++ +M   G   D ITY+ L+D  CK GKLE A+ V   + +   
Sbjct: 438 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN  T+N++   + K G V     ++  +     +PN + Y  ++  F      +    
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 557

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG-SSVYEMVLQQ 507
           L +EM+E+   P+   Y  LI      G    + + I+EM    C   G +S   MV+  
Sbjct: 558 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM--RSCGFVGDASTISMVINM 615

Query: 508 LRRAGQLQK 516
           L   G+L+K
Sbjct: 616 LHD-GRLEK 623


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 189/396 (47%), Gaps = 38/396 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F D +K   V+I  ++F+IL+          EA+    +M +YGC PD I ++ ++  LC
Sbjct: 185 FTDFIKI-GVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLC 243

Query: 230 RKRRASEAQSFFDSLKDK------------------------------------FEPDVI 253
           +K R +EA+     +K+K                                      PD  
Sbjct: 244 KKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAW 303

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y  ++ G+C+ G I+EA R+  EM+   + P+V TY+ +I+     G       +  EM
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G +PNS+T+N +++  VK  + ++V +   +M+  GC  D +TYN LI  HCK GK+
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           ++A ++++ M RKG   +  T N + R + +   ++ AH +    +      + V+Y  L
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTL 483

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +  +   +     L+L  EM+E E+ P++ TY  +I   C MG  N A   + E++E   
Sbjct: 484 IIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG- 542

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           L P    Y  ++    + GQ++K  +   KMV++ F
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNF 578



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 189/379 (49%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K  + + A   +  MK++ +     TF+ILV    R G   EA +    M 
Sbjct: 235 YNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMS 294

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           +    PD   ++++IS  C++ R +EA    + +++ K  PDV+ Y  L+ G    G+  
Sbjct: 295 QNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSE 354

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E  ++  EM+  G++PN  TY++++    + G++        +M E GC P+ +T+N L+
Sbjct: 355 EGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLI 414

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H K  + ++  ++ ++M R G + D +T N ++   C++ KL++A  +L S  R+G  
Sbjct: 415 SWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYF 474

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +  ++  +     K    + A R++ +MK+ +  P+ +TYN ++        T+  +  
Sbjct: 475 VDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDK 534

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             E+ E+ + P+  TY  +I  YC  G    A+++  +M+ EK  KP       +L  L 
Sbjct: 535 LDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV-EKNFKPDVVTCNTLLCGLC 593

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G L+K  +L    + +G
Sbjct: 594 KEGMLEKALKLFNTWISKG 612



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 169/356 (47%), Gaps = 7/356 (1%)

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR-----KRR 233
           + I+     I +  YV  G   +A   FNRM+  G  P  +  + +++ L R       R
Sbjct: 120 LHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIR 179

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            S+A  F D +K   + +   +  L+ G C      EA RV  +M+  G  P+  TY+ +
Sbjct: 180 LSKA-VFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTI 238

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           +D LC+ G++  A D+  +M   G  PN  TFN L+    +    ++   V   M +   
Sbjct: 239 LDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSV 298

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D  TYN +I   CK G++ +A+++   M     +P+  T+N +     + G      +
Sbjct: 299 VPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFK 358

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M+    +PN+VTYN++++ F      D V K  ++MEE+   P++ TY  LI+ +C
Sbjct: 359 LIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHC 418

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +G  + A++ + EM   K LK        +L+ L R  +L +  +L+     RG+
Sbjct: 419 KVGKMDEAFRLMDEM-GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGY 473



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 177/384 (46%), Gaps = 4/384 (1%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVRAGLAAEAVHA 205
           PD +   + ++G  +Q  +A       +  N++++ D  T++ L+      G + E    
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              ME  G  P+ + +++++    +K +  E       +++    PD++ Y  L+   C+
Sbjct: 360 IEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCK 419

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA R+  EM   G++ +  T + ++ ALCR  ++  AHD+       G   + ++
Sbjct: 420 VGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVS 479

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  + K  +  + L+++++MK        ITYN +I   C+ GK   AI  L+ ++
Sbjct: 480 YGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL 539

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+N I     + G V  A + + KM +   +P+ VT N L+         +
Sbjct: 540 ESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLE 599

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             LKL         + +  +Y  +I   C    +  A+  + EM EEK L P    Y  +
Sbjct: 600 KALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEM-EEKKLGPDCYTYNAI 658

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           L  L  AG+++  EE + K+ ++G
Sbjct: 659 LGGLTDAGRMKDAEEFISKIAEKG 682



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 178/395 (45%), Gaps = 61/395 (15%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +IN   +    +  +  I+ M+ R ++    T++++V+ +V+ G   E   
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDK 393

Query: 205 AFNRMEEYGCAPDKIAFSIVIS-----------------------------------ILC 229
              +MEE GC PD + ++ +IS                                    LC
Sbjct: 394 TVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALC 453

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R+R+  EA     S + + +  D + Y  L+ G+ +    S+A R++ EMK   I P++ 
Sbjct: 454 RERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSII 513

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+ +I  LC+ G+  +A D   E+LE G  P+ IT+N ++  + +  + EK  Q +N+M
Sbjct: 514 TYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
                + D +T N L+   CK+G LE A+K+ N+ + KG + +A ++N I   + K    
Sbjct: 574 VEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRF 633

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILM-----------------QMFATSKSTDMVLKLKK 451
             A  +  +M++ K  P+  TYN ++                 ++    KS +  L+L K
Sbjct: 634 GEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGK 693

Query: 452 EMEE------NEVEPNVNTYRILITMYCGMGHWNN 480
             +        E  PN   Y   I   C  G + +
Sbjct: 694 RQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 188/372 (50%), Gaps = 2/372 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK R  +     +  M++R V   V +++I +R   +AG   EA     +MEE GC PD 
Sbjct: 217 GKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDV 276

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFRE 277
           +  +++I ILC   R ++A+  F  +K   + PD + Y  L+     +G+      ++  
Sbjct: 277 VTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNA 336

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           +K  G   NV +Y+  +DALC+ G++  A DVF EM + G  P   ++N+L+   +KA R
Sbjct: 337 LKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADR 396

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             + L+++N M   G   +  T+   I+ H K G+   A+K    M  KG  P+    N 
Sbjct: 397 FNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNA 456

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   ++K G +  A R++ ++K +   P+ +TY ++++  + + + D  +K+  EM EN 
Sbjct: 457 VLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENR 516

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
             P+V     LI M    G  N A+K   E+ +E  L+P    Y  +L  L R G++++ 
Sbjct: 517 CAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL-KEMNLEPTDCTYNTLLAGLGREGKVKEV 575

Query: 518 EELVEKMVDRGF 529
            +L+E M    F
Sbjct: 576 MQLLEGMNSNSF 587



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 3/345 (0%)

Query: 166  LAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
            LA H  +   ++  V +   +++ L+   V   L   A   F+ M+  GC PD+  + ++
Sbjct: 748  LAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLI 807

Query: 225  ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
            +  + +  R  +     + + +K ++   + Y  ++ G  ++  + EA  ++ ++   G 
Sbjct: 808  LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867

Query: 284  QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
             P   TY  ++D L + G I  A  +F EMLE GCEPN   +N L+  +  A  TEKV +
Sbjct: 868  SPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCE 927

Query: 344  VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            ++  M   G   D  +Y  +ID  C DG+L D +     +   G  P+  T+N++   + 
Sbjct: 928  LFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLG 987

Query: 404  KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
            K G +  A  +Y  M+     PN  TYN L+     +       K+ +E+     +PNV 
Sbjct: 988  KSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVF 1047

Query: 464  TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            TY  LI  Y   G   NA+     MI   C +P SS Y  +  Q+
Sbjct: 1048 TYNALIRGYSVSGSPENAFAAYGRMIVGGC-RPNSSTYMQLPNQM 1091



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 145/281 (51%), Gaps = 1/281 (0%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            YH +++  GK  + +      + M ++  + T  T++ ++   V++ +  EA++ + ++ 
Sbjct: 804  YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLM 863

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
              G +P    +  ++  L +     +A++ FD  L+   EP+  +Y  L+ G+  AG+  
Sbjct: 864  SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            +   +F  M   G+ P++ +Y++VID LC  G++      F ++ ++G EP+ IT+N L+
Sbjct: 924  KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983

Query: 330  RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                K+ R E+ L +YN M++ G   +  TYN LI    K GK  +A K+   ++ KG  
Sbjct: 984  HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWK 1043

Query: 390  PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            PN  T+N + R  S  G    A   YG+M    C PN+ TY
Sbjct: 1044 PNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 188/391 (48%), Gaps = 14/391 (3%)

Query: 148  PDLYHEMINLAGKVRQ--FDLA-WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PDL      + G V++   D A W F  + K    +    T   ++  +VR+GL  EA+H
Sbjct: 624  PDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYA--TVCTILPSFVRSGLMKEALH 681

Query: 205  AFNRMEEYGCAPD-KIAFSIVISIL--CRKRRASEAQSFF--DSLKDKFEPDVIVYTNLV 259
                + EY   PD K+  S V S++    KR  +E    F  +        D +  + ++
Sbjct: 682  T---VREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPII 738

Query: 260  RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            R  C+      A  + ++ +  G+     +Y+ +I  L     I  A ++F+EM  +GC+
Sbjct: 739  RHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCD 798

Query: 320  PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            P+  T++ ++    K+ R E +L++  +M   G ++  +TYN +I    K   L++AI +
Sbjct: 799  PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINL 858

Query: 380  LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
               ++ +G +P   T+  +   + K G++  A  ++ +M +  CEPN   YNIL+  +  
Sbjct: 859  YYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRI 918

Query: 440  SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +  T+ V +L + M E  + P++ +Y ++I   C  G  N+   Y +++ +   L+P   
Sbjct: 919  AGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG-LEPDLI 977

Query: 500  VYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             Y +++  L ++G+L++   L   M  +G  
Sbjct: 978  TYNLLIHGLGKSGRLEEALSLYNDMEKKGIA 1008



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 2/291 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  +F+ A    + M          T  + +  + ++G + +A+  +  M+
Sbjct: 384 YNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK 443

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD +A + V+  L +  R   A+  F  LK     PD I YT +++   +A N  
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNAD 503

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++F EM      P+V   + +ID L + G+   A  +F E+ E+  EP   T+N L+
Sbjct: 504 EAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLL 563

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  + ++V+Q+   M       + ITYN ++DC CK+G++  A+ +L SM   GC 
Sbjct: 564 AGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCM 623

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           P+ S++N +   + K   ++ A  M+ +MK +   P+  T   ++  F  S
Sbjct: 624 PDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRS 673



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 183/404 (45%), Gaps = 6/404 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLA-GKVRQFDLAWHFIDLMKSRNVEITVDTF-S 187
           + L  F  V  +P  VH+ +  + M+ L     R  D+A  F DLM+ + ++  V TF +
Sbjct: 83  EALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVF-DLMQRQIIKANVGTFCT 141

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
           +     V  GL +  V A   M+E G   +   ++ +I  L +     EA   + ++  D
Sbjct: 142 VFGAVGVEGGLRSAPV-ALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAAD 200

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P V  Y+ L+  + +  +      +  EM+  G++PNVY+Y+I I  L + G++  A
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + +  +M E GC+P+ +T   L+++   A R      V+ +MK    + D +TY  L+D 
Sbjct: 261 YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK 320

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
               G      ++ N++   G N N  ++      + ++G V+ A  ++ +MK     P 
Sbjct: 321 CGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQ 380

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             +YN L+  F  +   +  L+L   M  +   PN  T+ + I  +   G    A K   
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY- 439

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           E+++ K + P       VL  L + G+L   + +  ++   G +
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGIS 483



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 1/218 (0%)

Query: 144  FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            F  +P  Y  +++   K    + A    D M     E     ++IL+  Y  AG   +  
Sbjct: 867  FSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVC 926

Query: 204  HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
              F  M E G  PD  ++++VI  LC   R ++  S+F  L D   EPD+I Y  L+ G 
Sbjct: 927  ELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 986

Query: 263  CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
             ++G + EA  ++ +M+  GI PN+YTY+ +I  L + G+   A  ++ E+L  G +PN 
Sbjct: 987  GKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNV 1046

Query: 323  ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
             T+N L+R +  +   E     Y +M   GC  ++ TY
Sbjct: 1047 FTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 190/436 (43%), Gaps = 41/436 (9%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +SFF W   +  F H    Y+ ++NL    + +   +   + M    +     +F+IL+R
Sbjct: 103 ISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIR 162

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK-------------------- 231
            + R   A +AV  F  M+   C PD   F I++  LC+                     
Sbjct: 163 SFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVP 222

Query: 232 ----------------RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
                           +R  EA+  F  + K  F PD I Y  ++ G  +AG+  EA +V
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
              M      P   TY I++++LC+ G + RA ++F  M   G  PNS+ + +L+    K
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           + R ++   ++++M   G   D IT+  +ID  CK G  E A K    M+R GC PN  T
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +  I + +SK+G V  A R+   M    C P++VTY  L+  F      D   +L  E++
Sbjct: 403 YTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC--LKPGSSVYEMVLQQLRRAG 512
           +    PN+  Y  L+   C  G   N    + E  +     L PG      ++  L + G
Sbjct: 463 KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCS--IIVGLCKTG 520

Query: 513 QLQKHEELVEKMVDRG 528
           +L +   + ++MV  G
Sbjct: 521 RLDEACRIFQRMVSEG 536



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 39/349 (11%)

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           ++  S V ++L   +    A SFF    ++  F+ DV  Y  L+       N S+   + 
Sbjct: 83  QVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIH 142

Query: 276 REMKMAGIQPNVYTYSIVI-----------------------------------DALCRC 300
            EM  AGI PN ++++I+I                                   D LC+ 
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202

Query: 301 GQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           G   +A +VF EM+ +G   P+      ++R  +KA R ++  +V+ QM++ G   D I 
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN +ID   K G  ++A+KVL++M+ K C P   T+ ++   + K G +  A  ++  M 
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
                PN+V Y  L+  FA S        L  EM E    P+V T+ ++I   C  G++ 
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            A K   EM+   C KP    Y  ++Q L + G++     +++ M+  G
Sbjct: 383 QAAKSFEEMMRGGC-KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 174/392 (44%), Gaps = 6/392 (1%)

Query: 143 EFVHSPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           E  + PD+    + + G  K   F+ A    + M     +  V T++ +++   + G  A
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
            A      M  +GC PD + +  ++   C+  R  EA    D L K    P++ +Y++LV
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 260 RGWCRAGNISEA-ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +G C  G++    + +F + K A    +      +I  LC+ G++  A  +F  M+  GC
Sbjct: 478 KGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC 537

Query: 319 EPNSITFNNLMR--VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           +P++ T+N L+      + +R E+   + + ++ +G   D +TY  L    CK G+++ A
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRA 597

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +K+L     +G N +   +  +   +   G V+ A  ++ +M      P+   Y  ++  
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIING 657

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
               K  +   K   EM     +P V TY  L+   C  G+ + A+     M+    L  
Sbjct: 658 LIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG 717

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +Y+ ++    +A ++    +L E M+ RG
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRG 749



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 4/254 (1%)

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           AG Q +V+TY+ +++ L      ++ + +  EML+ G  PN+ +FN L+R   +  R + 
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-CNPNASTFNMIF 399
            +  +  MKR  C+ D  T+  L+DC CK G  E A +V + M+  G   P+ +    + 
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
           R + K   V  A  ++G+M+     P+ + YN ++   A +      LK+   M      
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P   TY IL+   C  G    A +  R M      +P S +Y  ++    ++G++++   
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 520 LVEKMVDRGFTARP 533
           L ++MV+ G+  RP
Sbjct: 352 LFDEMVEAGY--RP 363



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 4/279 (1%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR--RASEAQSFFDSLK-DKFEPD 251
           + G   EA   F RM   GC PD   ++I+I+ LCR R  R   A +    L+   + PD
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPD 577

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
            + YT L  G C+ G +  A ++  E    G   +V  Y+ +   LC  GQ+ RA  +F 
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM+  G  P++  +  ++   +K  + E   + +++M   G +    TY  L+   C  G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 372 KLEDAIKVLNSMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            +++A      M+ +G    +   ++ +     K   V+ A +++  M      P  VT 
Sbjct: 698 NVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             L      S  T+   +L +EM      P+  T+  ++
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 37/225 (16%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K+ + D A   ++   SR     V  ++ L       G    AV  F  M   G APD  
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK----------------------------FEP- 250
           A+  +I+ L + ++  +A  FFD +  K                            FE  
Sbjct: 650 AYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGM 709

Query: 251 --------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
                    V++Y  L+ G+C+A  +  A ++F +M   G  P   T + + D L R G+
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGK 769

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             +A ++  EM   G  P++ TF  ++    K+  + K+L++  +
Sbjct: 770 TEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 209/417 (50%), Gaps = 22/417 (5%)

Query: 130 QVLSFFNWVTARPE--FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVD 184
           + L FFNW    PE  F H+   Y  M+ + G+ R  ++A +F+  +K R+   V++   
Sbjct: 101 KALQFFNWA---PELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDR 157

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            F+ L+R Y +AGL  E+V  FN M+  G +P  + F+ ++ IL ++ R + AQS FD +
Sbjct: 158 FFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEM 217

Query: 245 KDKF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
              +   PD   +  L+RG+C+   + E  R F+EM      P++ TY+ ++D LCR G+
Sbjct: 218 LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277

Query: 303 ITRAHDVFAEMLE--VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           +  AH+V   M++      P+ +T+  L+R +      ++ L V+ +M   G + + ITY
Sbjct: 278 VNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITY 337

Query: 361 NFLIDCHCKDGKLEDAIKVL-NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           N LI   C+  K++   ++   ++   G  P+  T N +       G++N A  ++ KM 
Sbjct: 338 NTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM 397

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-------EPNVNTYRILITMY 472
            L   P++ TY++L++      + +   +L  E+ E E+        P V  Y+ +    
Sbjct: 398 VLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFL 457

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C  G    A +  R++++     P S  ++++++   R G  +   EL+  M+ R F
Sbjct: 458 CRNGKTAKAERVFRQLMKRGTQDPLS--FKILIKGHCREGTFEAGYELLVLMLRRDF 512



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 179/341 (52%), Gaps = 9/341 (2%)

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV----Y 255
           ++A+  FN   E G   +  ++ +++ IL R R  + A++F  S+K +    V +    +
Sbjct: 100 SKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFF 159

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +L+R + +AG   E+ +VF  MK  G+ P+V T++ ++  L + G+   A  VF EML 
Sbjct: 160 NSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLS 219

Query: 316 V-GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  P++ TFN L+R   K S  ++  + + +M R  C+ D +TYN L+D  C+ GK+ 
Sbjct: 220 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVN 279

Query: 375 DAIKVLNSMVRKGC--NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            A  V+N MV+K    NP+  T+  + R      +++ A  ++ +M     +PN +TYN 
Sbjct: 280 IAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNT 339

Query: 433 LMQMFATSKSTDMVLKL-KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           L++     +  D + ++ +  +      P+  T   L+  +C  G+ N+A +   +M+  
Sbjct: 340 LIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVL 399

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
             ++P S+ Y ++++ L + G  ++ E+L +++ ++    R
Sbjct: 400 N-VRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLR 439



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 168/364 (46%), Gaps = 14/364 (3%)

Query: 135 FNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSILV 190
           F +      F   PDL  Y+ +++   +  + ++A + ++ M  KS N+   V T++ LV
Sbjct: 247 FRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLV 306

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKF 248
           R Y       EA+  F  M   G  P++I ++ +I  LC  ++  + +  F+       F
Sbjct: 307 RGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGF 366

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD      L+   C AGN+++A  VF +M +  ++P+  TYS++I  LC+ G   RA  
Sbjct: 367 IPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQ 426

Query: 309 VFAEMLEV-------GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +F E+ E        GC P    + ++     +  +T K  +V+ Q+ + G + D +++ 
Sbjct: 427 LFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFK 485

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  HC++G  E   ++L  M+R+   P+  T+  +   + + G+   A++   KM   
Sbjct: 486 ILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKS 545

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P T T++ ++             +    M E ++  N+N     + +  G G  + A
Sbjct: 546 SHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKA 605

Query: 482 YKYI 485
           +K +
Sbjct: 606 FKIV 609


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 188/372 (50%), Gaps = 2/372 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK R  +     +  M++R V   V +++I +R   +AG   EA     +MEE GC PD 
Sbjct: 217 GKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDV 276

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFRE 277
           +  +++I ILC   R ++A+  F  +K   + PD + Y  L+     +G+      ++  
Sbjct: 277 VTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNA 336

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           +K  G   NV +Y+  +DALC+ G++  A DVF EM + G  P   ++N+L+   +KA R
Sbjct: 337 LKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADR 396

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             + L+++N M   G   +  T+   I+ H K G+   A+K    M  KG  P+    N 
Sbjct: 397 FNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNA 456

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   ++K G +  A R++ ++K +   P+ +TY ++++  + + + D  +K+  EM EN 
Sbjct: 457 VLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENR 516

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
             P+V     LI M    G  N A+K   E+ +E  L+P    Y  +L  L R G++++ 
Sbjct: 517 CAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL-KEMNLEPTDCTYNTLLAGLGREGKVKEV 575

Query: 518 EELVEKMVDRGF 529
            +L+E M    F
Sbjct: 576 MQLLEGMNSNSF 587



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 8/373 (2%)

Query: 143  EFVHSPDLYHEMINLAGKVRQF-----DLAWH-FIDLMKSRNVEITVDTFSILVRRYVRA 196
            E + S  L  + + L+  +R F      LA H  +   ++  V +   +++ L+   V  
Sbjct: 720  ENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDE 779

Query: 197  GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
             L   A   F+ M+  GC PD+  + +++  + +  R  +     + + +K ++   + Y
Sbjct: 780  DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTY 839

Query: 256  TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
              ++ G  ++  + EA  ++ ++   G  P   TY  ++D L + G I  A  +F EMLE
Sbjct: 840  NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899

Query: 316  VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
             GCEPN   +N L+  +  A  TEKV +++  M   G   D  +Y  +ID  C DG+L D
Sbjct: 900  CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959

Query: 376  AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
             +     +   G  P+  T+N++   + K G +  A  +Y  M+     PN  TYN L+ 
Sbjct: 960  GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019

Query: 436  MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                +       K+ +E+     +PNV TY  LI  Y   G   NA+     MI   C +
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGC-R 1078

Query: 496  PGSSVYEMVLQQL 508
            P SS Y  +  Q+
Sbjct: 1079 PNSSTYMQLPNQM 1091



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 188/391 (48%), Gaps = 14/391 (3%)

Query: 148  PDLYHEMINLAGKVRQFDLA---WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PDL      + G V++  L    W F  + K    +    T   ++  +VR+GL  EA+H
Sbjct: 624  PDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYA--TVCTILPSFVRSGLMKEALH 681

Query: 205  AFNRMEEYGCAPD-KIAFSIVISIL--CRKRRASEAQSFF--DSLKDKFEPDVIVYTNLV 259
                + EY   PD K+  S V S++    KR  +E    F  +        D +  + ++
Sbjct: 682  T---VREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPII 738

Query: 260  RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            R +C+      A  + ++ +  G+     +Y+ +I  L     I  A ++F+EM  +GC+
Sbjct: 739  RHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCD 798

Query: 320  PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            P+  T++ ++    K+ R E +L++  +M   G ++  +TYN +I    K   L++AI +
Sbjct: 799  PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINL 858

Query: 380  LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
               ++ +G +P   T+  +   + K G++  A  ++ +M +  CEPN   YNIL+  +  
Sbjct: 859  YYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRI 918

Query: 440  SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +  T+ V +L + M E  + P++ +Y ++I   C  G  N+   Y +++ +   L+P   
Sbjct: 919  AGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG-LEPDLI 977

Query: 500  VYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             Y +++  L ++G+L++   L   M  +G  
Sbjct: 978  TYNLLIHGLGKSGRLEEALSLYNDMEKKGIA 1008



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 143/291 (49%), Gaps = 2/291 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  +F+ A    + M          T  + +  + ++G + +A+  +  M+
Sbjct: 384 YNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK 443

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD +A + V+  L +  R   A+  F  LK     PD I YT +++   +A N  
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNAD 503

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++F EM      P+V   + +ID L + G+   A  +F E+ E+  EP   T+N L+
Sbjct: 504 EAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLL 563

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  + ++V+Q+   M       + ITYN ++DC CK+G++  A+ +L SM   GC 
Sbjct: 564 AGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCM 623

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           P+ S++N +   + K G ++ A  M+ +MK +   P+  T   ++  F  S
Sbjct: 624 PDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRS 673



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 183/404 (45%), Gaps = 6/404 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLA-GKVRQFDLAWHFIDLMKSRNVEITVDTF-S 187
           + L  F  V  +P  VH+ +  + M+ L     R  D+A  F DLM+ + ++  V TF +
Sbjct: 83  EALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVF-DLMQRQIIKANVGTFCT 141

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
           +     V  GL +  V A   M+E G   +   ++ +I  L +     EA   + ++  D
Sbjct: 142 VFGAVGVEGGLRSAPV-ALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAAD 200

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P V  Y+ L+  + +  +      +  EM+  G++PNVY+Y+I I  L + G++  A
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + +  +M E GC+P+ +T   L+++   A R      V+ +MK    + D +TY  L+D 
Sbjct: 261 YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK 320

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
               G      ++ N++   G N N  ++      + ++G V+ A  ++ +MK     P 
Sbjct: 321 CGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQ 380

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             +YN L+  F  +   +  L+L   M  +   PN  T+ + I  +   G    A K   
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY- 439

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           E+++ K + P       VL  L + G+L   + +  ++   G +
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGIS 483


>gi|449491189|ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Cucumis sativus]
          Length = 450

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 211/426 (49%), Gaps = 19/426 (4%)

Query: 81  SNPSLNPDFTIPSLSLGFS---QISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNW 137
           S  +++P   IP     F+   +  T  +  P TVR  ++  C         +   FFNW
Sbjct: 19  STKAISP---IPEFDFKFNTSERRPTHTNFDPFTVREALDSYCN-----DWKRSYEFFNW 70

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMK-SRNVEITVDTFSILVRRYVRA 196
           V +  +F H+ + Y+ M+++ GK  +FDL+W  I+ M+ S +      TF IL +RY  A
Sbjct: 71  VESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQSPSASPDHATFRILFKRYALA 130

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD--VIV 254
            L +EA+ A+ R+ E+    D+ +F  +I  LC  R   EAQ        K + D    +
Sbjct: 131 HLVSEAIAAYERLREFKLR-DETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDSSTKI 189

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           +  ++RGW + G  S+    + EM   G++ ++++YSI +D  C+ G+  +A  ++ EM 
Sbjct: 190 HNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMK 249

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           + G + + + +N ++     +   +   +V+++MK +GC+ + +T N +I   C++G+ +
Sbjct: 250 KKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFK 309

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           DA  +L+ M+++ C PN  T++  FR + K  ++     ++ +M      P   TY +L+
Sbjct: 310 DAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEI---LVLFDRMIKYGVHPKMDTYVMLL 366

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           + F        V  +  +MEE    PN   Y  LI      G  + A KY  EM+  K L
Sbjct: 367 RKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMV-AKGL 425

Query: 495 KPGSSV 500
            P   V
Sbjct: 426 SPKLRV 431


>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Glycine max]
          Length = 481

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 210/403 (52%), Gaps = 14/403 (3%)

Query: 134 FFNWVTARPE-FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           FFNW +     +  S D+ +E++++ GK+++F      +D M  R   +    F+ LVRR
Sbjct: 87  FFNWASKTTTGYQPSSDVCNEIVDILGKMQRFQELHQVLDEMSKREELLDEAVFATLVRR 146

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPD 251
           +V A    EA+  F R +E+G   +  AF  ++  LCR +   +A++ F +S+K     D
Sbjct: 147 FVGAHKVDEAIQLFYRRKEFGLELNSEAFRTLLMWLCRYKHVEDAEALFHNSVKKGLRAD 206

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           + ++  ++ GWC  GN  EA+RV+R++  +  +P+++TY+  I AL + G++  A  +F 
Sbjct: 207 IKMWNVILNGWCVLGNSHEAKRVWRDIVASPCKPDIFTYATFIKALTKKGKLGTALKLFR 266

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
            M + G +P+ +  N ++       R  + L+++  M   GCE +  TYN LI   CK  
Sbjct: 267 GMWDKGGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERGCEPNVATYNSLIKYMCKIQ 326

Query: 372 KLEDAIKVLNSMVRK--GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +++   ++++ M RK   C PNA T+  + + + + G+V    R+  +M+   C  N   
Sbjct: 327 RMKKVYELVDEMERKKGSCLPNAVTYCYLLKSLKEPGEVC---RVLERMERNGCGMNDDV 383

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN++++++      D V K  +EME N   P+  +Y I+I      G   +A +Y+ EMI
Sbjct: 384 YNMVLRLYMKWDDGDGVRKTWEEMERNGWGPDRRSYTIMIHENFEKGRVKDAVRYLEEMI 443

Query: 490 EEKCLKPGSSVYEMVLQ-QLRRAGQLQKHEELVEKMVDRGFTA 531
             K + P     ++V    +R  G+ +K E+     VD G T+
Sbjct: 444 -SKGMVPERRTEKLVSSMNIRLKGRSEKQED-----VDGGTTS 480


>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 628

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 199/390 (51%), Gaps = 2/390 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +  F H    Y+ M+++  K RQF+     ++ M ++ + +T++TF+I ++ +
Sbjct: 190 FFCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 248

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             A    +AV  F  M++Y         + ++  L R +   EAQ  FD LK++F P+++
Sbjct: 249 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 308

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+ GWCR  N+ EA R++ +M   G++P++  ++++++ L R  + + A  +F  M
Sbjct: 309 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 368

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  ++  ++R   K S  E  ++ ++ M   G + D   Y  LI       KL
Sbjct: 369 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 428

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +   ++L  M  KG  P+  T+N + + ++       A R+Y KM   + EP+  T+N++
Sbjct: 429 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 488

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M+ +  +++ +M   +  EM +  + P+ N+Y +LI    G G    A +Y+ EM+ +K 
Sbjct: 489 MKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML-DKG 547

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +K     Y        + GQ +  EEL ++
Sbjct: 548 MKTPLIDYNKFAADFHKGGQPEIFEELAQR 577


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 190/401 (47%), Gaps = 5/401 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L   N   AR +F  S  +Y E++   G    FDL    +  M+    ++        V 
Sbjct: 73  LRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVE 132

Query: 192 RYVRAGLAAEAVH-AFNRMEE--YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
            Y R     +AV    N+++   +G   D + F+ ++++L    +    +S ++ +  + 
Sbjct: 133 SYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRG 192

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            +PDV+    L++  CRA  +  A  +  EM   G+ P+  T++ ++      G I  A 
Sbjct: 193 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAAL 252

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            V A+M+E GC P  +T N L+  + K  R E  L    Q    G E D +TYN  +   
Sbjct: 253 RVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGL 312

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C++G +  A+KV++ M+++G +P+  T+N +  C+SK G+++ A  +  +M D  C P+T
Sbjct: 313 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 372

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            T+N L+   ++    +  L L +E+    + P+V T+ ILI   C +G  +   +   E
Sbjct: 373 TTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 432

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           M    C  P    Y +++  L   G+L    +L+ +M   G
Sbjct: 433 MKSSGC-TPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 194/400 (48%), Gaps = 7/400 (1%)

Query: 133 SFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           S +N +T R      PD+   + +I    +  Q   A   ++ M S  V     TF+ L+
Sbjct: 183 SVYNEMTGRG---IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLM 239

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFE 249
           + ++  G    A+    +M E GC+P  +  +++I+  C+  R  +A  +    + D FE
Sbjct: 240 QGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFE 299

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD + Y   V G C+ G++S A +V   M   G  P+V+TY+ VI+ L + G++  A  +
Sbjct: 300 PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 359

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +M++ GC P++ TFN L+      +R E+ L +  ++   G   D  T+N LI+  CK
Sbjct: 360 VNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 419

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G     I++   M   GC P+  T+N++   +  +G +  A  +  +M+   C  +TVT
Sbjct: 420 VGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVT 479

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN ++         +   ++  +M+   +  +  T+  LI   C     ++A + I +M+
Sbjct: 480 YNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +E  L+P +  Y  +L    + G ++K  +++E M   GF
Sbjct: 540 KEG-LQPNNITYNSILTHYCKQGNIKKAADILETMTANGF 578



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 3/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +DLM     +  V T++ ++    + G   EA    N+M + GC PD   F+ +I 
Sbjct: 321 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L  + R  EA      L  K   PDV  +  L+   C+ G+     R+F EMK +G  P
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+I+ID LC  G++  A D+  EM   GC  +++T+N ++    K  R E+  +V+
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM   G     +T+N LID  CK  +++DA +++  MV++G  PN  T+N I     K 
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G++  A  +   M     E + VTY  L+     +  T + LKL + M    + P    Y
Sbjct: 561 GNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 620

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKM 524
             +I       +  +A    REM E     P +  Y++V + L R  G +++  + + +M
Sbjct: 621 NPVIQSLFRRNNLRDALNLFREMTEVG-EPPDALTYKIVFRSLCRGGGPIKEAFDFLVEM 679

Query: 525 VDRGF 529
           V++GF
Sbjct: 680 VNKGF 684



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 126/299 (42%), Gaps = 39/299 (13%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y  + +IN   KV    L     + MKS        T++IL+      G    A+ 
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             N ME  GC    + ++ +I  LC+K R  EA+  FD +  +      + +  L+ G C
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLC 523

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A  I +A  +  +M   G+QPN  TY+ ++   C+ G I +A D+   M   G E + +
Sbjct: 524 KAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVV 583

Query: 324 TFNNLMRVHVKASRTE-----------------------------------KVLQVYNQM 348
           T+  L+    KA RT+                                     L ++ +M
Sbjct: 584 TYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643

Query: 349 KRLGCEADTITYNFLIDCHCKDGK-LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
             +G   D +TY  +    C+ G  +++A   L  MV KG  P  S+F M+   +  LG
Sbjct: 644 TEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 178/391 (45%), Gaps = 35/391 (8%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M S  +   V T +I++           A  A  ++ + G  PD   F+ +I  LC + +
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   FD +  + F+P+V+ Y  L+ G C+ GN S A R+ R M+    QPNV  +S 
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID+LC+  Q+T A ++F+EM+  G  PN +T+N+L+    K    + V  + N+M    
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D  T N ++D  CK+G + +A  V++ M+ +G  PN  T+N +        +V+ A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +++  M    C  N ++YN L+  +   +S D  + L +EM   E+ PN  TY  LI   
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 473 CGMGHWNNAYKYIREM----------------------------------IEEKCLKPGS 498
           C +G   +A     EM                                  IE     P  
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +Y  +L  + RAG+L+   +L   +  +G 
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGL 486



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 186/409 (45%), Gaps = 40/409 (9%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A H  D M     +  V T+  L+    + G  + A+     ME+  C P+ 
Sbjct: 154 GKIGE---ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNV 210

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + FS +I  LC+ R+ +EA + F  +  K   P+++ Y +L+ G C+         +  E
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 270

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M  + I P+V+T + V+DALC+ G +  AHDV   M+  G EPN +T+N LM  H   + 
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +  ++V++ M    C A+ I+YN LI+ +CK   ++ A+ +   M R+   PN  T+N 
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +  +G +  A  ++ +M      P+ VTY  L      ++  D  + L K +E + 
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 458 -----------------------------------VEPNVNTYRILITMYCGMGHWNNAY 482
                                              ++PNV TY I+I   C  G    A 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           K   EM +  C  P    Y ++ +   R  +  +  EL+E+M+ RGF+ 
Sbjct: 511 KLFSEMNKNGC-SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV 558



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 151/322 (46%), Gaps = 2/322 (0%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAG 266
           +M+ +G  PD    +IVI+ LC   R   A S     LK   +PD   +T L+RG C  G
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            I EA  +F +M   G QPNV TY  +I+ LC+ G  + A  +   M +  C+PN + F+
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    K  +  +   ++++M   G   + +TYN LI   CK  + +    ++N MV  
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
              P+  T N +   + K G V  AH +   M     EPN VTYN LM         D+ 
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +K+   M   +   NV +Y  LI  YC +   + A     EM  ++ L P +  Y  ++ 
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE-LTPNTVTYNTLIH 393

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L   G+LQ    L  +MV RG
Sbjct: 394 GLCHVGRLQDAISLFHEMVARG 415



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 164/345 (47%), Gaps = 3/345 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           QV   FN  +       SP++  Y+ +I+   K+ ++      ++ M    +   V T +
Sbjct: 225 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            +V    + G+ AEA    + M   G  P+ + ++ ++   C +     A   FD++  K
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
               +VI Y  L+ G+C+  ++ +A  +F EM    + PN  TY+ +I  LC  G++  A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM+  G  P+ +T+  L     K    +K + +   ++    + D   Y  ++D 
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+LEDA  + +++  KG  PN  T+N++   + K G +  A +++ +M    C PN
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             TYN++ + F  +      ++L +EM       +V+T  +L+ M
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 2/229 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K++  D A +  + M  + +     T++ L+      G   +A+  F+ M 
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + +  +   LC+ R   +A +   +++   ++PD+ +YT ++ G CRAG + 
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F  +   G+QPNV+TY+I+I  LC+ G +  A  +F+EM + GC PN  T+N + 
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           R  ++ +   + +++  +M   G   D  T   L+     DG L+ ++K
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQSVK 580



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 37/294 (12%)

Query: 236 EAQSFFDSLKDKFEPDVIV-YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA S F+ +  K  P   V +  L+    +  + S    + R+M   GI P+VYT +IVI
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           ++LC   ++  A    A++L++G +P                                  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQP---------------------------------- 138

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D  T+  LI   C +GK+ +A+ + + M+ +G  PN  T+  +   + K+G+ + A R+
Sbjct: 139 -DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRL 197

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
              M+   C+PN V ++ L+      +       +  EM    + PN+ TY  LI   C 
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 257

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  W +    + EM++ K + P       V+  L + G + +  ++V+ M+ RG
Sbjct: 258 LCEWKHVTTLMNEMVDSKIM-PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 121/245 (49%), Gaps = 1/245 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D+A    D M  ++    V +++ L+  Y +     +A++ F  M      P+ + ++
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC   R  +A S F  +  + + PD++ Y  L    C+  ++ +A  + + ++ +
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
              P++  Y+ ++D +CR G++  A D+F+ +   G +PN  T+N ++    K     + 
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            +++++M + GC  +  TYN +     ++ +    I++L  M+ +G + + ST  ++   
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569

Query: 402 ISKLG 406
           +S  G
Sbjct: 570 LSDDG 574



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M   +  P+TV +N L+   A +K    +L L ++M+   + P+V T  I+I   C 
Sbjct: 58  FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCH 117

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +   + A+  + ++++    +P ++ +  +++ L   G++ +   L +KM+  GF
Sbjct: 118 LNRVDFAFSALAKILKLG-HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171


>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
          Length = 598

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 225/476 (47%), Gaps = 50/476 (10%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           +P L L  ++  +   + P  +  V+ + CG    +       FF W   +P + HS ++
Sbjct: 90  VPKLELALNE--SGVELRPGLIERVLNR-CGDAGNLGY----RFFVWAAKQPRYCHSIEV 142

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  M+ +  K+RQF   W  I+ M+  N + I  + F +LV+R+  A +  +A+   + M
Sbjct: 143 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 202

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------FEPD 251
            ++G  PD+  F  ++  LC+     +A   F+ ++ +                  FEPD
Sbjct: 203 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRVGKMMEAKYVLVQMNEAGFEPD 262

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           ++ YTNL+ G+  AG +++A  + R+M+  G +PN   Y+++I ALC+  ++  A  VF 
Sbjct: 263 IVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFV 322

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM    CE + +T+  L+    K  + +K   V + M + G     +TY  ++  H K  
Sbjct: 323 EMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKE 382

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
             E+ ++++  M +   +P+   +N++ R   KLG+V  A R++ +M++    P   T+ 
Sbjct: 383 SFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFV 442

Query: 432 ILMQMFATS----KSTD---------MVLKLKK-EMEEN---------EVEPNVNTYRIL 468
           I++   A+     +++D          VLK KK EM ++           E NV ++ I 
Sbjct: 443 IMINGLASQGCLLEASDHFKEMLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIW 502

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           I      G+   A  Y  EMIE   + P    +  +++ L++    +   E+ EK+
Sbjct: 503 IHALFSKGYEKEACSYCIEMIEMDFM-PQPDTFAKLMKGLKKLYNREFAGEITEKV 557



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/320 (19%), Positives = 113/320 (35%), Gaps = 98/320 (30%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           VL   N     P+ V   +L     N AGK+     A+  +  M+ R  E   + +++L+
Sbjct: 250 VLVQMNEAGFEPDIVDYTNLLSGYAN-AGKMAD---AYDLLRDMRRRGFEPNANCYTVLI 305

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL------ 244
           +   +     EA+  F  ME Y C  D + ++ ++S  C+  +  +     D +      
Sbjct: 306 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 365

Query: 245 ---------------KDKFE---------------PDVIVYTNLVRGWCRAGNISEAERV 274
                          K+ FE               PD+ +Y  ++R  C+ G + EA R+
Sbjct: 366 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 425

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCG----------------------QITRAHDVFA- 311
           + EM+  G+ P V T+ I+I+ L   G                      ++  A DV++ 
Sbjct: 426 WNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMLLLNTVLKDKKLEMAKDVWSC 485

Query: 312 -----------------------------------EMLEVGCEPNSITFNNLMRVHVKAS 336
                                              EM+E+   P   TF  LM+   K  
Sbjct: 486 ITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLY 545

Query: 337 RTEKVLQVYNQMKRLGCEAD 356
             E   ++  +++ +  E +
Sbjct: 546 NREFAGEITEKVRNMAAERE 565


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 172/346 (49%), Gaps = 5/346 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  L+    +A L  EA+     M+  G  P  +  ++VI  LCR  R   A   +  +
Sbjct: 82  TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM 141

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            D   PD + YT LV G  +AG + +A +V +EM  A   P+  T ++V+ +LC   ++ 
Sbjct: 142 NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVD 201

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR-TEKVLQVYNQMKRLGCEADTITYNFL 363
            A ++  EML  G   N+IT++ L+    K  R  E V  +  ++ R G   D +TY+ +
Sbjct: 202 DARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTV 261

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK G+L DA+ +   M    C P A T+N +     + GD++ A R+ GKM D  C
Sbjct: 262 IDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNC 318

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ +TY  LM  F      D   +L ++M  N++ P+V T+  L+   CG G   +A +
Sbjct: 319 APDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 378

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            + E+    C  P    Y  V+    ++ Q++K EELV     RGF
Sbjct: 379 LLEEITRRGC-PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGF 423



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 193/396 (48%), Gaps = 12/396 (3%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+F+    L H + + AG++R  D      +++ +R+V     T +++V+         +
Sbjct: 147 PDFLTYTKLVHGL-SKAGRLR--DAVQVLQEMVSARHVPDNT-TLTVVVQSLCLGDRVDD 202

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNLV 259
           A      M   G A + I +S ++  LC+  R  EA +    +  +  F PD++ Y+ ++
Sbjct: 203 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVI 262

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C+AG + +A  +F EM  A   P   TY+ +I   CR G +  A  +  +M++  C 
Sbjct: 263 DGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCA 319

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ IT+  LM    K  R +   +++ QM       D +T+  L+D  C +G++EDA+++
Sbjct: 320 PDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 379

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L  + R+GC P   T+N +     K   V  A  +    +     PNTVTYNIL+     
Sbjct: 380 LEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 439

Query: 440 SKSTDMVLKLKKEM--EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
           +  TD  L+   ++  E      +V  Y I++   C  G  ++A ++  EMI+   + P 
Sbjct: 440 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV-PA 498

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           ++ +  V+  L +A Q Q+  EL+E+M+  G T  P
Sbjct: 499 AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 534



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 149/299 (49%), Gaps = 9/299 (3%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG++R        +D+ +  +   T  T++ L+  Y RAG   EA+    +M +  CAPD
Sbjct: 268 AGRLRDA------VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPD 321

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            I ++ ++S  C+  R  +A   F  +  +K  PDV+ +T+LV G C  G + +A  +  
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 381

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           E+   G  P +YTY+ V+D  C+  Q+ +A ++ A+    G  PN++T+N L+    +A 
Sbjct: 382 EITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 441

Query: 337 RTEKVLQVYNQMKRLG--CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           RT++ LQ  +Q+   G  C      Y  ++D  C+DG+ +DA++    M+++G  P A+T
Sbjct: 442 RTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 501

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           F  +   + K      AH +  +M      P   T + ++  +  +       +L  E+
Sbjct: 502 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 110/235 (46%), Gaps = 5/235 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +++   K+ + D A+     M +  +   V TF+ LV      G   +A+ 
Sbjct: 319 APDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 378

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               +   GC P    ++ V+   C+  +  +A+      + + F P+ + Y  LV G C
Sbjct: 379 LLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 438

Query: 264 RAGNISEAERVFREMKMAG--IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           RAG   +A +   ++   G     +V  Y+I++DALCR G+   A   + EM++ G  P 
Sbjct: 439 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPA 498

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           + TF  ++    KA + ++  ++  +M + G      T + ++  +C+ G ++ A
Sbjct: 499 AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 102/209 (48%), Gaps = 7/209 (3%)

Query: 147 SPDL--YHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           SPD+  +  +++ L G+ R  D A   ++ +  R    T+ T++ +V  Y ++    +A 
Sbjct: 354 SPDVVTFTSLVDGLCGEGRMED-ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAE 412

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP---DVIVYTNLVR 260
                    G  P+ + ++I+++  CR  R  +A  + D L  +  P    V +Y  ++ 
Sbjct: 413 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 472

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
             CR G   +A + + EM   G  P   T++ V+ ALC+  Q  +AH++  EM++ G  P
Sbjct: 473 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 532

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMK 349
              T + ++  + +A   +K  ++ ++++
Sbjct: 533 GPGTCDAVVSAYCRAGMIQKADELASELR 561



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 39/255 (15%)

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFA-EMLEVGCEPNSITFNNLMRVHVKASRTE 339
           AG   +  T+++V+  L    ++     +   E+ + G  P+ +  N ++     A  T 
Sbjct: 4   AGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTT 63

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
             + ++++M  LG    T  YN LI   CK   L++A+ +L  M  +G NP     N++ 
Sbjct: 64  TAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVI 122

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + + G +  A  +Y +M D    P+ +TY            T +V  L K        
Sbjct: 123 GGLCRAGRLRHALGVYRQMNDAH-PPDFLTY------------TKLVHGLSKA------- 162

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
                           G   +A + ++EM+  + + P ++   +V+Q L    ++    E
Sbjct: 163 ----------------GRLRDAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVDDARE 205

Query: 520 LVEKMVDRGFTARPL 534
           LVE+M+ RG  A  +
Sbjct: 206 LVEEMLHRGMAANAI 220



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 3/140 (2%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN--VEITVDTFSILVRRYVRAGLAAE 201
           FV +   Y+ ++    +  + D A  ++D + S       +V  ++I++    R G   +
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 482

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
           AV  +  M + G  P    F+ V+  LC+  +  +A    + + K    P       +V 
Sbjct: 483 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 542

Query: 261 GWCRAGNISEAERVFREMKM 280
            +CRAG I +A+ +  E+++
Sbjct: 543 AYCRAGMIQKADELASELRL 562


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 180/353 (50%), Gaps = 8/353 (2%)

Query: 185 TFSILVRRYVRAGLAAEAV----HAFNRMEEYG--CAPDKIAFSIVISILCRKRRASEAQ 238
           T+  L++   + G    A+       N   +YG  C P  I +SI+I  LC+  R  EA+
Sbjct: 198 TYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAK 257

Query: 239 SFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             F+ +K +   PDVI Y+ L+ G+C AG   +++ +F EM   G+QP++ T+S++ID L
Sbjct: 258 ELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTL 317

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C+ G++T A  +   M++ G  PN IT+N+L+             +++  M   G E D 
Sbjct: 318 CKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDE 377

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           I+Y  LI+ +CK  K+++A+ + N M++ G +PN +T+  + + + + G V  A +++G 
Sbjct: 378 ISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           MK      N+  Y I +     +      ++L  E++    + N+  Y  LI   C  G 
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              A++   ++ +E  L+P    Y +++    + GQ+     L EKM + G T
Sbjct: 498 LETAWELFEKLSQEG-LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCT 549



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 191/374 (51%), Gaps = 2/374 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   KV + D A    + MK++ +   V ++S L+  +  AG   ++ H F+ M 
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD + FS++I  LC++ + +EA+   + +  +   P++I Y +L+ G+C  G+++
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  M   G++P+  +Y+ +I+  C+  ++  A +++ EML+VG  PN  T+  L+
Sbjct: 360 SARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLL 419

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   +  +     +++  MK  G  A++  Y   +D  CK+  L +A+++ N +      
Sbjct: 420 KGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFK 479

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N   ++ +   + K G +  A  ++ K+     +P+ VTYNI++  F      D    L
Sbjct: 480 LNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANIL 539

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            ++MEEN   P++  Y  L+  +C         K + +M+ +K + P ++   +V+  L 
Sbjct: 540 FEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV-QKDVSPNAASCTIVVDMLC 598

Query: 510 RAGQLQKHEELVEK 523
           +  + +K  +L+ K
Sbjct: 599 KDEKYKKFVDLLPK 612



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 203/449 (45%), Gaps = 22/449 (4%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPE--FVHSPD 149
           PS     S +ST  S  PS+    I ++    H  P+L   + FN    R E  F H   
Sbjct: 10  PSFKPNLSPLSTHSSTIPSS----IPQTSSTHHPNPILP--AAFN----REEISFHHPLS 59

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L+       G +     A+HF DLM   +    + +F+ L+    +    ++    +N M
Sbjct: 60  LFLRNCK-TGNITAIQ-AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 117

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
              G +PD    SI+ + LC   R SEA +     L+  + P+V+ YT L++G C    I
Sbjct: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE------VGCEPNS 322
           SEA R+F  M+  G  PN  TY  +I  LC+ G +  A  +  EML       V C+P  
Sbjct: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGV 237

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT++ ++    K  R ++  +++ +MK  G   D I+Y+ LI   C  GK + +  + + 
Sbjct: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDE 297

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           MV +G  P+  TF+++   + K G V  A ++   M      PN +TYN L+  F     
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +   +L   M    +EP+  +Y  LI  YC       A     EM++     P  + Y 
Sbjct: 358 LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVG-KSPNVTTYG 416

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            +L+ L + G++   ++L   M   G +A
Sbjct: 417 TLLKGLFQKGKVGDAKKLFGVMKTYGVSA 445


>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 180/368 (48%), Gaps = 13/368 (3%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L FF  +   P + H    +   I++AG++R +   W  +D M++R +     TF+I+
Sbjct: 83  KALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAII 142

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKF 248
             RYV AG    A+  F  M E+GC  D  +F+ ++ +LC+ +R   A +  F   + +F
Sbjct: 143 TERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGRF 202

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
                    L++G+ RAG + EA   F +MK    + +V TY+ V+      G++ +A  
Sbjct: 203 RI-------LLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQR 255

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           VF EM+  G  P+  T+N  ++V  K    E  + V+ +M R G   ++ TYN +I   C
Sbjct: 256 VFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLC 315

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G++E A++ +  M    C PN   +N++ R      ++     ++ KM D  C PN  
Sbjct: 316 HVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLD 375

Query: 429 TYNILMQMFATSKSTDMVL---KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           TYNIL+      K +D +L   KL  EM E    P   T+  ++      G+ + A + +
Sbjct: 376 TYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQDFAKEIL 435

Query: 486 REMIEEKC 493
           R  ++ +C
Sbjct: 436 R--LQSRC 441



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 8/136 (5%)

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           +S+F+       +L D      +  +M+  +  PN  T+ I+ + + ++   D  +K+  
Sbjct: 101 SSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFF 160

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M E+    ++N++  ++ + C             EM + K  K     + ++L+   RA
Sbjct: 161 SMHEHGCVQDLNSFNTILDVLCKSKRV--------EMADNKLFKVFRGRFRILLKGFFRA 212

Query: 512 GQLQKHEELVEKMVDR 527
           GQL++  E   +M  R
Sbjct: 213 GQLKEAWEFFLQMKKR 228



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 371 GKLED---AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           G+L D      +++ M  +   PN  TF +I       G  + A +++  M +  C  + 
Sbjct: 112 GRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDL 171

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEV-EPNVNTYRILITMYCGMGHWNNAYKYIR 486
            ++N ++ +   SK        + EM +N++ +     +RIL+  +   G    A+++  
Sbjct: 172 NSFNTILDVLCKSK--------RVEMADNKLFKVFRGRFRILLKGFFRAGQLKEAWEFFL 223

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +M + KC +     Y  V+     AG+++K + +  +M+  G
Sbjct: 224 QMKKRKC-EIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEG 264


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 194/414 (46%), Gaps = 33/414 (7%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K +  D A   +D   S      V T+SIL     + G   EA      M 
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             GC P+ + ++ +I  LC+  +  +A    +SL    F PDV+ YT +V G C+ G + 
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++   M   G  P+V TY+ +++ LCR G++  AH +F EM+   C  +++ + +L+
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513

Query: 330 RVHVKASRTEKV------------LQVYNQM-------KRL-------------GCEADT 357
             + K+SRT++             + VYN +        RL             GC  + 
Sbjct: 514 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 573

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TYN ++D  CK GK+++A   L SM   GC P+  ++N+I   + K      A ++  +
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M      P+ VTYN LM  F   +  D  + + K M +  V+P+  TY  LI+       
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             +AY+ + EM+   C+    + Y  ++ +L + G L++   L++ M   G  A
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 747



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 196/420 (46%), Gaps = 36/420 (8%)

Query: 145 VHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           + SPD   Y+ +I+   +    D A  F+  M  R V   V T++IL+    +A    +A
Sbjct: 221 IPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKA 280

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG 261
               + M + G  PD + F+ ++  LC+  +   A S    + ++   P    Y  L+ G
Sbjct: 281 SEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG 340

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+  N+  A+ +  E   +G  P+V TYSI+ D LC+ G+I  A ++  EM   GC PN
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T+N L+    KAS+TEK  ++   +   G   D +TY  ++D  CK+G+L+ A+K++ 
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 460

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT------------ 429
            M+++GC P+  T+  +   + + G V+ AH ++ +M    C  + +             
Sbjct: 461 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 520

Query: 430 --------------------YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                               YN LM  +      D +  + ++M      PN+ TY I++
Sbjct: 521 RTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 580

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              C  G  + A+ ++  M    C+ P    Y +++  L +A + ++  +++++M+  G 
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCV-PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 169/351 (48%), Gaps = 7/351 (1%)

Query: 146 HSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           ++PD   YH +I    ++ Q D A+  +D  K R  +  V  ++IL R + + G   +A+
Sbjct: 156 YAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDAL 215

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
             F  +     +PD IA++ +I   CRK     A  F   + + K  PDV  Y  L+ G 
Sbjct: 216 EIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGL 271

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+A    +A  +  EM   G+ P+  T++ ++D LC+ G+  RAH + A M E  C P+ 
Sbjct: 272 CKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSC 331

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+N L+    K    ++   + ++    G   D +TY+ L D  CK G++++A +++  
Sbjct: 332 CTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE 391

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M  KGC PN  T+N +   + K      A+ +   +      P+ VTY I++        
Sbjct: 392 MSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR 451

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
            D  LK+ + M +    P+V TY  L+   C  G  + A+   +EM+ + C
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 184/381 (48%), Gaps = 9/381 (2%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    I + G  K  + D A   ++ M  R    +V T++ L+    R G   EA H 
Sbjct: 434 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 493

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
           F  M    C  D +A+  +++  C+  R  EAQ   D ++    P + VY  L+ G+C+ 
Sbjct: 494 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--PYIDVYNALMDGYCKE 551

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + E   VF +M   G  PN+ TY+IV+D LC+ G++  A      M   GC P+ +++
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N ++    KAS+ ++  QV +QM + G   D +TYN L+   CK+ + +DA+ +L +M++
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT-VTYNILMQMFATSKSTD 444
            G +P+  T+N +   +S+   +  A+ +  +M    C  +   TYN ++          
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 731

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L L   M  + VE N  TY I I   C  G  + A   + EM     L+   S Y  V
Sbjct: 732 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVS-YTTV 787

Query: 505 LQQLRRAGQLQKHEELVEKMV 525
           +  L +A QL +  +L  +MV
Sbjct: 788 IIGLCKAEQLDRASKLAREMV 808



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 33/361 (9%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F RM + G APD   + +VI  LC+  +  +A +  D  K + F+P+V VYT L R +C+
Sbjct: 148 FERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCK 207

Query: 265 AGNISEAERVFR-------------------------------EMKMAGIQPNVYTYSIV 293
            G + +A  +FR                               EM    + P+V+TY+I+
Sbjct: 208 TGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNIL 267

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID LC+  +  +A ++  EM++ G  P+++TFN++M    KA + E+   +   M    C
Sbjct: 268 IDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNC 327

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
                TYN LI   CK   ++ A  +++  V  G  P+  T++++   + K G ++ A  
Sbjct: 328 RPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFE 387

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M    C PN VTYN L+     +  T+   +L + +  +   P+V TY I++   C
Sbjct: 388 LVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLC 447

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
             G  + A K +  M++  C  P    Y  +++ L R G++ +   + ++MV +  TA  
Sbjct: 448 KEGRLDKALKMVEGMLKRGC-TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506

Query: 534 L 534
           L
Sbjct: 507 L 507



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 168/380 (44%), Gaps = 35/380 (9%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           D+Y+ +++   K  + D   +  + M  R     + T++I++    + G   EA      
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 598

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M   GC PD ++++I+I  L +  +  EA+   D + +    PD + Y  L+  +C+   
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS-ITFN 326
             +A  + + M  AG+ P+  TY+ +I  L +  ++  A+++  EML  GC  ++  T+N
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM--- 383
            ++    K    ++ L + + M   G EA+T+TYN  ID  CK+G+L++A  +L+ M   
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 778

Query: 384 ------------------------------VRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
                                           KG    + TFN++    +K   ++ A  
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 838

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           + G M    C P+ +TYN+++         D   +L  EM    +  +  +Y +LI   C
Sbjct: 839 LLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC 898

Query: 474 GMGHWNNAYKYIREMIEEKC 493
           G G    A + + EM    C
Sbjct: 899 GQGRGKEALQVLEEMASSDC 918



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 145/340 (42%), Gaps = 33/340 (9%)

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           ++V  +L R +    A  FF    D+ F+         ++     G+      +F  M  
Sbjct: 94  AVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLD 153

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAH---------------DVFAEMLEVGCE------ 319
           AG  P+ YTY +VI +LC+  QI +A                 V+  +    C+      
Sbjct: 154 AGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKD 213

Query: 320 ----------PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
                     P++I +N ++  H + +  +  L+   +M       D  TYN LID  CK
Sbjct: 214 ALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCK 273

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             K + A ++L+ MV +G  P+  TFN I   + K G    AH +   M +  C P+  T
Sbjct: 274 ASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN L+      ++ D    L  E   +   P+V TY IL    C  G  + A++ ++EM 
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            + C  P    Y  ++  L +A + +K  EL+E +V  GF
Sbjct: 394 GKGC-TPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGF 432



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 156/336 (46%), Gaps = 38/336 (11%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV   D A+ F++ M S      V +++I++    +A    EA    ++M + G  PD 
Sbjct: 587 GKV---DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDA 643

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ +++  C++ R  +A     ++ K   +PD + Y  L+ G  +   + +A  +  E
Sbjct: 644 VTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHE 703

Query: 278 MKMAG-IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           M   G +     TY+ +ID LC+ G + +A  +   M   G E N++T+N  +    K  
Sbjct: 704 MLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 763

Query: 337 RTEKVLQVYNQMKRLG------------CEADTI---------------------TYNFL 363
           R ++   + ++M  L             C+A+ +                     T+N L
Sbjct: 764 RLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLL 823

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID   K  +L++A+ +L  MV++GC+P+  T+NM+  C+ KL  V+ A  ++ +M     
Sbjct: 824 IDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGI 883

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             ++V+Y +L+            L++ +EM  ++ E
Sbjct: 884 VASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 45/250 (18%)

Query: 151 YHEMINLAGKVRQFDLAWHFI-DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ +I+   +  +   A+  + +++++  V     T++ ++ R  + G   +A+   + M
Sbjct: 681 YNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM 740

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFF---DSLKDKFEPDVIVYTNLVRGWCRAG 266
             +G   + + ++I I  LC++ R  EA S     D+L+D+     + YT ++ G C+A 
Sbjct: 741 TGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE-----VSYTTVIIGLCKAE 795

Query: 267 NISEAERVFREMKMA------------------------------------GIQPNVYTY 290
            +  A ++ REM                                       G  P+V TY
Sbjct: 796 QLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITY 855

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           ++VI  LC+  ++ +A ++F EM   G   +S+++  L+       R ++ LQV  +M  
Sbjct: 856 NMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 915

Query: 351 LGCEADTITY 360
             CE D + +
Sbjct: 916 SDCEIDDLKW 925



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 40/215 (18%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K      A   +D M    VE    T++I + R  + G   EA    + M+
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 776

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSF----------------FDSLKDKF------ 248
                 D+++++ VI  LC+  +   A                   F+ L D F      
Sbjct: 777 TL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRL 833

Query: 249 ---------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
                           P VI Y  ++   C+   + +A  +F EM + GI  +  +Y+++
Sbjct: 834 DEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 893

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           I  LC  G+   A  V  EM    CE + + + ++
Sbjct: 894 IYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 175/363 (48%), Gaps = 2/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A H  D M     +  V T+  L+    + G    A+     ME+  C PD + ++ +I 
Sbjct: 156 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 215

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC+ R+ +EA + F  +  +   PD+  YT+L+   C          +  +M  + I P
Sbjct: 216 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 275

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V  +S V+DALC+ G+IT AHDV   M+  G EPN +T+N LM  H   S  ++ ++V+
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 335

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + M   G   + I+YN LI+ +CK  +++ A  +   M +K   PN  T+N +   +  +
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  ++ +M      P+  TY IL+         D  + L K +E + ++P++  Y
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            I+I   C  G    A + I   +  K L+P    Y +++  L R G L +  +L  +M 
Sbjct: 456 TIVIDGMCRAGEL-EAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514

Query: 526 DRG 528
             G
Sbjct: 515 GNG 517



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 192/419 (45%), Gaps = 39/419 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ ++    K +Q+   +   + M S  +   V T +IL+  +        A     ++ 
Sbjct: 70  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   F+ +I  LC + +  +A   FD +  + F+P+V+ Y  L+ G C+ GN +
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+ R M+    QP+V  Y+ +ID+LC+  Q+T A ++F++M+  G  P+  T+ +L+
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK----------------- 372
                    + V  + NQM       D + ++ ++D  CK+GK                 
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309

Query: 373 ------------------LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                             +++A+KV ++MV  G  PN  ++N +     K+  ++ A  +
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M   +  PNTVTYN LM            + L  EM  +   P++ TYRIL+   C 
Sbjct: 370 FEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 429

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
             H + A   ++  IE   + P   +Y +V+  + RAG+L+   ++   +  +G   RP
Sbjct: 430 KSHLDEAMALLKT-IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL--RP 485



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 164/347 (47%), Gaps = 3/347 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           QV   FN  +       SPD+  Y  +I+    + ++      ++ M +  +   V  FS
Sbjct: 222 QVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFS 281

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KD 246
            +V    + G   EA    + M   G  P+ + ++ ++   C +    EA   FD++  +
Sbjct: 282 TVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN 341

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
            + P+VI Y  L+ G+C+   + +A  +F EM    + PN  TY+ ++  LC  G++  A
Sbjct: 342 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDA 401

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM+  G  P+  T+  L+    K S  ++ + +   ++    + D   Y  +ID 
Sbjct: 402 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDG 461

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+LE A  + +++  KG  PN  T+ ++   + + G ++ A++++ +M    C P+
Sbjct: 462 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 521

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
             TYN + Q    +K     ++L +EM       +V+T  +L+ M C
Sbjct: 522 GCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 121/229 (52%), Gaps = 2/229 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+++ D A +  + M  + +     T++ L+      G   +A+  F+ M 
Sbjct: 350 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV 409

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
            +G  PD   + I++  LC+K    EA +   +++    +PD+ +YT ++ G CRAG + 
Sbjct: 410 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 469

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  +   G++PNV TY+I+I+ LCR G +  A+ +F EM   GC P+  T+N + 
Sbjct: 470 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 529

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           +  ++     + +Q+  +M   G  AD  T   L++  C D KL+ ++K
Sbjct: 530 QGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD-KLDQSVK 577



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 1/261 (0%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A   F  M      P+   ++ ++ ++ +  Q      +  +M   G  P+  T N 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+      +R      V  ++ +LG + DT T+  LI   C +GK+ DA+ + + M+ +G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN  T+  +   + K+G+ N A R+   M+   C+P+ V Y  ++      +      
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L  +M    + P++ TY  LI   C +  W +    + +MI  K + P   ++  V+  
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK-IMPDVVIFSTVVDA 286

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
           L + G++ +  ++V+ M+ RG
Sbjct: 287 LCKEGKITEAHDVVDMMIIRG 307



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 1/280 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P  + +  L+    +         +  +M   GI P+VYT +I+I++ C   +   A  V
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L++G +P++ TF  L+R      +    L ++++M   G + + +TY  LI+  CK
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G    AI++L SM +  C P+   +  I   + K   V  A  ++ KM      P+  T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L+           V  L  +M  +++ P+V  +  ++   C  G    A+  +  MI
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             + ++P    Y  ++       ++ +  ++ + MV  G+
Sbjct: 305 -IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 343



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 4/204 (1%)

Query: 330 RVHVKA---SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           R H K+   +  +  L  +N+M  +     T+ +N L+    K  +      + N M   
Sbjct: 37  RFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSF 96

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  P+  T N++      L     A  +  K+  L  +P+T T+  L++           
Sbjct: 97  GIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDA 156

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L L  +M     +PNV TY  LI   C +G+ N A + +R M +  C +P   VY  ++ 
Sbjct: 157 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNC-QPDVVVYTSIID 215

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +  Q+ +   L  KMV +G +
Sbjct: 216 SLCKDRQVTEAFNLFSKMVGQGIS 239


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 186/409 (45%), Gaps = 40/409 (9%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A H  D M     +  V T+  L+    + G  + A+     ME+  C P+ 
Sbjct: 154 GKIGE---ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNV 210

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + FS +I  LC+ R+ +EA + F  +  K   P+++ Y +L+ G C+         +  E
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 270

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M  + I P+V+T + V+DALC+ G +  AHDV   M+  G EPN +T+N LM  H   + 
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +  ++V++ M    C A+ I+YN LI+ +CK   ++ A+ +   M R+   PN  T+N 
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +  +G +  A  ++ +M      P+ VTY  L      ++  D  + L K +E + 
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 458 -----------------------------------VEPNVNTYRILITMYCGMGHWNNAY 482
                                              ++PNV TY I+I   C  G    A 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           K   EM +  C  P    Y ++ +   R  +  +  EL+E+M+ RGF+ 
Sbjct: 511 KLFSEMNKNGC-SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV 558



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 178/391 (45%), Gaps = 35/391 (8%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M S  +   V T +I++           A  A  ++ + G  PD   F+ +I  LC + +
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   FD +  + F+P+V+ Y  L+ G C+ GN S A R+ R M+    QPNV  +S 
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID+LC+  Q+T A ++F+EM+  G  PN +T+N+L+    K    + V  + N+M    
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D  T N ++D  CK+G + +A  V++ M+ +G  PN  T+N +        +V+ A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +++  M    C  N ++YN L+  +   +S D  + L +EM   E+ PN  TY  LI   
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 473 CGMGHWNNAYKYIREM----------------------------------IEEKCLKPGS 498
           C +G   +A     EM                                  IE     P  
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +Y  +L  + RAG+L+   +L   +  +G 
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGL 486



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 151/322 (46%), Gaps = 2/322 (0%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAG 266
           +M+ +G  PD    +IVI+ LC   R   A S     LK   +PD   +T L+RG C  G
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            I EA  +F +M   G QPNV TY  +I+ LC+ G  + A  +   M +  C+PN + F+
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    K  +  +   ++++M   G   + +TYN LI   CK  + +    ++N MV  
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
              P+  T N +   + K G V  AH +   M     EPN VTYN LM         D+ 
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +K+   M   +   NV +Y  LI  YC +   + A     EM  ++ L P +  Y  ++ 
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE-LTPNTVTYNTLIH 393

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L   G+LQ    L  +MV RG
Sbjct: 394 GLCHVGRLQDAISLFHEMVARG 415



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 164/345 (47%), Gaps = 3/345 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           QV   FN  +       SP++  Y+ +I+   K+ ++      ++ M    +   V T +
Sbjct: 225 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            +V    + G+ AEA    + M   G  P+ + ++ ++   C +     A   FD++  K
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
               +VI Y  L+ G+C+  ++ +A  +F EM    + PN  TY+ +I  LC  G++  A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM+  G  P+ +T+  L     K    +K + +   ++    + D   Y  ++D 
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+LEDA  + +++  KG  PN  T+N++   + K G +  A +++ +M    C PN
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             TYN++ + F  +      ++L +EM       +V+T  +L+ M
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 2/229 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K++  D A +  + M  + +     T++ L+      G   +A+  F+ M 
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + +  +   LC+ R   +A +   +++   ++PD+ +YT ++ G CRAG + 
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F  +   G+QPNV+TY+I+I  LC+ G +  A  +F+EM + GC PN  T+N + 
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           R  ++ +   + +++  +M   G   D  T   L+     DG L+ ++K
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQSVK 580



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 37/294 (12%)

Query: 236 EAQSFFDSLKDKFEPDVIV-YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA S F+ +  K  P   V +  L+    +  + S    + R+M   GI P+VYT +IVI
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           ++LC   ++  A    A++L++G +P                                  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQP---------------------------------- 138

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D  T+  LI   C +GK+ +A+ + + M+ +G  PN  T+  +   + K+G+ + A R+
Sbjct: 139 -DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRL 197

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
              M+   C+PN V ++ L+      +       +  EM    + PN+ TY  LI   C 
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 257

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  W +    + EM++ K + P       V+  L + G + +  ++V+ M+ RG
Sbjct: 258 LCEWKHVTTLMNEMVDSKIM-PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 121/245 (49%), Gaps = 1/245 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D+A    D M  ++    V +++ L+  Y +     +A++ F  M      P+ + ++
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC   R  +A S F  +  + + PD++ Y  L    C+  ++ +A  + + ++ +
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
              P++  Y+ ++D +CR G++  A D+F+ +   G +PN  T+N ++    K     + 
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            +++++M + GC  +  TYN +     ++ +    I++L  M+ +G + + ST  ++   
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569

Query: 402 ISKLG 406
           +S  G
Sbjct: 570 LSDDG 574



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M   +  P+TV +N L+   A +K    +L L ++M+   + P+V T  I+I   C 
Sbjct: 58  FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCH 117

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +   + A+  + ++++    +P ++ +  +++ L   G++ +   L +KM+  GF
Sbjct: 118 LNRVDFAFSALAKILKLG-HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 194/439 (44%), Gaps = 47/439 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +SFF W   +  F H    Y+ ++NL    + +   +   + M    +     +F+IL+R
Sbjct: 103 ISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIR 162

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK-------------------- 231
            + R   A +AV  F  M+   C PD   F I++  LC+                     
Sbjct: 163 SFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVP 222

Query: 232 ----------------RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
                           +R  EA+  F  + K  F PD I Y  ++ G  +AG+  EA +V
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
              M      P   TY I++++LC+ G + RA ++F  M   G  PNS+ + +L+    K
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           + R ++   ++++M   G   D IT+  +ID  CK G  E A K    M+R GC PN  T
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +  I + +SK+G V  A R+   M    C P++VTY  L+  F      D   +L  E++
Sbjct: 403 YTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE-----KCLKPGSSVYEMVLQQLR 509
           +    PN+  Y  L+   C  G   +  K + ++ E+     + L PG      ++  L 
Sbjct: 463 KCSSSPNLQLYSSLVNGLCDGG---SVEKTLDDLFEQSKAAAETLDPGLCCS--IIVGLC 517

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G+L +   + ++MV  G
Sbjct: 518 KTGRLDEACRIFQRMVSEG 536



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 39/349 (11%)

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           ++  S V ++L   +    A SFF    ++  F+ DV  Y  L+       N S+   + 
Sbjct: 83  QVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIH 142

Query: 276 REMKMAGIQPNVYTYSIVI-----------------------------------DALCRC 300
            EM  AGI PN ++++I+I                                   D LC+ 
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202

Query: 301 GQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           G   +A +VF EM+ +G   P+      ++R  +KA R ++  +V+ QM++ G   D I 
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN +ID   K G  ++A+KVL++M+ K C P   T+ ++   + K G +  A  ++  M 
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
                PN+V Y  L+  FA S        L  EM E    P+V T+ ++I   C  G++ 
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            A K   EM+   C KP    Y  ++Q L + G++     +++ M+  G
Sbjct: 383 QAAKSFEEMMRGGC-KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 175/392 (44%), Gaps = 6/392 (1%)

Query: 143 EFVHSPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           E  + PD+    + + G  K   F+ A    + M     +  V T++ +++   + G  A
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
            A      M  +GC PD + +  ++   C+  R  EA    D L K    P++ +Y++LV
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 260 RGWCRAGNISEA-ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
            G C  G++ +  + +F + K A    +      +I  LC+ G++  A  +F  M+  GC
Sbjct: 478 NGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC 537

Query: 319 EPNSITFNNLMR--VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           +P++ T+N L+      + +R E+   + + ++++G   D +TY  L    CK G+++ A
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRA 597

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +K+L     +G N +   +  +   +   G V+ A  ++ +M      P+   Y  ++  
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIING 657

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
               K  +   K   EM     +P V TY  L+   C  G+ + A+     M+    L  
Sbjct: 658 LIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVG 717

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +Y+ ++    +A ++    +L E M+ RG
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRG 749



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 4/254 (1%)

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           AG Q +V+TY+ +++ L      ++ + +  EML+ G  PN+ +FN L+R   +  R + 
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-CNPNASTFNMIF 399
            +  +  MKR  C+ D  T+  L+DC CK G  E A +V + M+  G   P+ +    + 
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
           R + K   V  A  ++G+M+     P+ + YN ++   A +      LK+   M      
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P   TY IL+   C  G    A +  R M      +P S +Y  ++    ++G++++   
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 520 LVEKMVDRGFTARP 533
           L ++MV+ G+  RP
Sbjct: 352 LFDEMVEAGY--RP 363



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 160/376 (42%), Gaps = 17/376 (4%)

Query: 104 AHSISPSTVRHV--IEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           AH   P +V ++  ++  C +       Q+L   +  ++ P       LY  ++N  G  
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL----QLYSSLVN--GLC 481

Query: 162 RQFDLAWHFIDLM-KSRNVEITVD---TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
               +     DL  +S+    T+D     SI+V    + G   EA   F RM   GC PD
Sbjct: 482 DGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVG-LCKTGRLDEACRIFQRMVSEGCKPD 540

Query: 218 KIAFSIVISILCRKRRASEAQSF---FDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
              ++I+I+ LCR R     ++F    D  K  + PD + YT L  G C+ G +  A ++
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             E    G   +V  Y+ +   LC  GQ+ RA  +F EM+  G  P++  +  ++   +K
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-CNPNAS 393
             + E   + +++M   G +    TY  L+   C  G +++A     SM+ +G    +  
Sbjct: 661 VKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVM 720

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            ++ +     K   V+ A +++  M      P  VT   L      S  T+   +L +EM
Sbjct: 721 IYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM 780

Query: 454 EENEVEPNVNTYRILI 469
                 P+  T+  ++
Sbjct: 781 AAGGSPPHAATFTAIL 796



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 37/225 (16%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K+ + D A   ++   SR     V  ++ L       G    AV  F  M   G APD  
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK----------------------------FEP- 250
           A+  +I+ L + ++  +A  FFD +  K                            FE  
Sbjct: 650 AYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESM 709

Query: 251 --------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
                    V++Y  L+ G+C+A  +  A ++F +M   G  P   T + + D L R G+
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGK 769

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             +A ++  EM   G  P++ TF  ++    K+  + K+L++  +
Sbjct: 770 TEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 194/421 (46%), Gaps = 47/421 (11%)

Query: 146 HSPDLY--HEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
            +PD+Y   ++I NL  + R  D A   +   +     + V  ++ LV  Y R G    A
Sbjct: 71  EAPDVYLCTKLIRNLCRRGRTSD-AARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRG 261
                 M     APD   ++ +I +LC + R ++A S  D  L+   +P+V+ YT L+  
Sbjct: 130 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD------------- 308
            C+     +A  V  EM+  G  PN+ TY+++I+ +CR G++  A D             
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 309 ----------------------VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
                                 +FAEM+E  C PN +TF+ L+R   +    E+ +QV  
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           QM    C  +T   N +I+  CK G+++DA K LN+M   GCNP+  ++  + + + +  
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
             N A  +  +M    C PN VT+N  + +       +  + L ++M+E+     V TY 
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            L+  +C  GH ++A +  R M    C KP +  Y  +L  L  A +L    ELV +M+ 
Sbjct: 427 ALVNGFCVQGHIDSALELFRSM---PC-KPNTITYTTLLTGLCNAERLDAAAELVAEMLH 482

Query: 527 R 527
           R
Sbjct: 483 R 483



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 183/381 (48%), Gaps = 5/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K   F+ A   +D M+++     + T+++++    R G   +A    NR+ 
Sbjct: 180 YTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLF 239

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
            YGC PD ++++ ++  LC  +R  + +  F  + +K   P+ + +  L+R +CR G + 
Sbjct: 240 SYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVE 299

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +V ++M       N    +IVI+++C+ G++  A      M   GC P++I++  ++
Sbjct: 300 RAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVL 359

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   +A R     ++  +M R  C  + +T+N  I   C+ G +E AI ++  M   GC 
Sbjct: 360 KGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCT 419

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
               T+N +       G ++ A  ++   + + C+PNT+TY  L+     ++  D   +L
Sbjct: 420 VGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAEL 476

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM   +  PNV T+ +L+  +C  G  + A + + +M+E  C  P    Y  +   + 
Sbjct: 477 VAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGC-TPNLITYNTLFDGIT 535

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           +    +   EL+  +V +G +
Sbjct: 536 KDCSSEDALELLHGLVSKGVS 556



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 174/359 (48%), Gaps = 39/359 (10%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDSLKDKFEPDVIVYTNLVR 260
           A  A  R E    AP+  A + +  ++ R+  A  A+     + +D   PDV + T L+R
Sbjct: 25  AAAAATRPESPNVAPNP-ASARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIR 83

Query: 261 GWCRAGNISEAERVFREMKMAG--------------------------------IQPNVY 288
             CR G  S+A RV R  + +G                                + P+ Y
Sbjct: 84  NLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAY 143

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+ +I  LC  G++  A  +  +ML  GC+PN +T+  L+    K S  E+ + V ++M
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR--CISKLG 406
           +  GC  + +TYN +I+  C++G+++DA  +LN +   GC P+  ++  + +  C SK  
Sbjct: 204 RAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRW 263

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           D      ++ +M +  C PN VT+++L++ F      +  +++ ++M E+E   N     
Sbjct: 264 D--DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCN 321

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           I+I   C  G  ++A+K++  M    C  P +  Y  VL+ L RA +    +EL+++MV
Sbjct: 322 IVINSICKQGRVDDAFKFLNNMGSYGC-NPDTISYTTVLKGLCRAERWNDAKELLKEMV 379



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 191/415 (46%), Gaps = 41/415 (9%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L    R  D+   F ++M+ +N      TF +L+R + R G+   A+    +M E+ CA
Sbjct: 256 GLCASKRWDDVEELFAEMME-KNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECA 314

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
            +    +IVI+ +C++ R  +A  F +++      PD I YT +++G CRA   ++A+ +
Sbjct: 315 TNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKEL 374

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
            +EM      PN  T++  I  LC+ G I +A  +  +M E GC    +T+N L+     
Sbjct: 375 LKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCV 434

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
               +  L+++  M    C+ +TITY  L+   C   +L+ A +++  M+ + C PN  T
Sbjct: 435 QGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVT 491

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           FN++     + G ++ A  +  +M +  C PN +TYN L        S++  L+L   + 
Sbjct: 492 FNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLV 551

Query: 455 ENEVEPNVNTYRILITMY-----------------------------------CGMGHWN 479
              V P+V T+  +I +                                    C     +
Sbjct: 552 SKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEID 611

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           NA  ++  M+   C+ P  S Y ++++ L R G L++ ++L+  +  RG  ++ L
Sbjct: 612 NAIDFLAYMVSNGCM-PNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNL 665



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 154/317 (48%), Gaps = 4/317 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN   K  + D A+ F++ M S        +++ +++   RA    +A      M    
Sbjct: 323 VINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNN 382

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P+++ F+  I ILC+K    +A    + +++      V+ Y  LV G+C  G+I  A 
Sbjct: 383 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSAL 442

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +FR M     +PN  TY+ ++  LC   ++  A ++ AEML   C PN +TFN L+   
Sbjct: 443 ELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFF 499

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +    ++ +++  QM   GC  + ITYN L D   KD   EDA+++L+ +V KG +P+ 
Sbjct: 500 CQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDV 559

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF+ I   +SK   V  A +M+   +D+   P  + YN ++         D  +     
Sbjct: 560 ITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAY 619

Query: 453 MEENEVEPNVNTYRILI 469
           M  N   PN +TY ILI
Sbjct: 620 MVSNGCMPNESTYIILI 636



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 44/289 (15%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           E+T +TF  ++    + GL  +A+    +M+E+GC    + ++ +++  C +     A  
Sbjct: 387 EVTFNTFICIL---CQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALE 443

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            F S+  K  P+ I YT L+ G C A  +  A  +  EM      PNV T++++++  C+
Sbjct: 444 LFRSMPCK--PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQ 501

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNL------------------------------- 328
            G +  A ++  +M+E GC PN IT+N L                               
Sbjct: 502 KGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVIT 561

Query: 329 ----MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
               + +  K  R E+ +Q+++  + +G     + YN ++   CK  ++++AI  L  MV
Sbjct: 562 FSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMV 621

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             GC PN ST+ ++   +++ G +  A  +   +    C    V+ N++
Sbjct: 622 SNGCMPNESTYIILIEGLAREGLLKEAQDLLSML----CSRGVVSKNLI 666


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 218/505 (43%), Gaps = 80/505 (15%)

Query: 102 STAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           S A  ++P  V  V+      ++       L FF W   +  + H+ D Y  MI++ G+ 
Sbjct: 176 SMAQDLNPDAVVKVLNLQTDAQN------ALRFFQWADKQEGYDHNTDAYFTMIDILGRA 229

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI-- 219
           + F      +  M+++  EIT       V  Y R+G   E++ AFN M+E G  P  I  
Sbjct: 230 KMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDT 289

Query: 220 AFSIVISILCRKRRASEAQSFF------------------------------------DS 243
           A++ V+  L + ++   A++ F                                    D 
Sbjct: 290 AYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDM 349

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK------------------------ 279
           +++ + PDV+ YT ++   C+   I +A  V ++M+                        
Sbjct: 350 IQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRP 409

Query: 280 -----------MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
                        G+ PN+YTY+I+   LC+  ++ RA ++F E L  G +PN +T+N L
Sbjct: 410 EEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTL 469

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  + + SR  + + +  +M +  C  D +TY  LI    +  +L DA+++ + M  KG 
Sbjct: 470 LNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGY 529

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           + N  T N++ R ++++G+   A   Y +MKD     +   Y + +   +T+   +    
Sbjct: 530 DVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQA 589

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L  EM      PN+ TY  +I  +C  G  ++A   +  MIE   + P +  Y +++++ 
Sbjct: 590 LLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENG-IGPDTGSYNILIKEF 648

Query: 509 RRAGQLQKHEELVEKMVDRGFTARP 533
              G+ Q  ++L    ++RG    P
Sbjct: 649 HNQGRTQDADQLYATALERGVVLNP 673


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 184/355 (51%), Gaps = 2/355 (0%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +D + SR  + TV T +++V    + G  + A+    +M E  C P+ +++SI+I  LC+
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 231 KRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
            R  +EA   F  ++     P V+ Y +L+ G C +G   +A  +F+EM    ++P+V T
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           +SI++DALC+ G +  A  VF +M+++  EP+ +T+++L+    K+S  ++   + N+M 
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
                 D +T++  +D  CK G + +A  ++N M+ +G  PN  T+N +         ++
Sbjct: 377 SRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMD 436

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A +++  M +  C P+ ++YNIL++ +  S+  D   +L  EM    + PN  T+  LI
Sbjct: 437 EARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLI 496

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +  C  G    A +  ++M    C  P    Y  +L    + G L +   L E +
Sbjct: 497 SGLCQAGRPYAAKELFKKMGSHGC-PPDLITYSTLLSGFCKHGHLDEALALFEAL 550



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 176/334 (52%), Gaps = 8/334 (2%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           DL +H    M+S  +  TV T++ L+     +G   +A   F  M E+   PD + FSI+
Sbjct: 265 DLFYH----MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSIL 320

Query: 225 ISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +  LC++    EA S F  + +   EPD++ Y++L+ G C++    E+  +  EM    I
Sbjct: 321 VDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNI 380

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V T+SI +D  C+ G ++ A  +   M+E G  PN +T+N+LM  +   S+ ++  +
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARK 440

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           V++ M   GC  D ++YN LI  +CK  ++++A ++ + M  KG  PN+ T   +   + 
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           + G    A  ++ KM    C P+ +TY+ L+  F      D  L L + +++++++PN  
Sbjct: 501 QAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHV 560

Query: 464 TYRILITMYCGMGHWNNAYKYIREM-IEEKCLKP 496
             +IL+   C  G   +A +    + IEE  L+P
Sbjct: 561 ICKILLGGMCKAGKLEDAKELFSSLSIEE--LQP 592



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 2/372 (0%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
            G    FD A  + + M   N    +  F+ L+   VR       V  + +ME +G +  
Sbjct: 79  GGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCS 138

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
               +I+I+ LC         S    + K  F+P +I +  L+ G C  G I EA     
Sbjct: 139 VYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLD 198

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            +   G QP VYT++++++ LC+ G+ + A     +M+E+ CEP  ++++ ++    K  
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR 258

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
              + + ++  M+ +G     +TYN LI   C  G+ + A  +   M+     P+  TF+
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFS 318

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           ++   + K G V  A  ++GKM  +  EP+ VTY+ L+     S        L  EM   
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P+V T+ I + ++C  G  + A   I  MI E+ L+P    Y  ++       Q+ +
Sbjct: 379 NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI-ERGLRPNVVTYNSLMDGYCLHSQMDE 437

Query: 517 HEELVEKMVDRG 528
             ++ + MV++G
Sbjct: 438 ARKVFDIMVNKG 449



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 167/348 (47%), Gaps = 2/348 (0%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           ++ TF+ L+      G   EA+   + +   G  P     +++++ LC+  + S A  + 
Sbjct: 173 SIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWM 232

Query: 242 DSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             + +   EP+V+ Y+ ++   C+   ++EA  +F  M+  GI P V TY+ +I  +C  
Sbjct: 233 KKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNS 292

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           GQ  +A  +F EMLE   +P+ +TF+ L+    K     + L V+ +M ++  E D +TY
Sbjct: 293 GQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTY 352

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + LI   CK    +++  +LN M+ +   P+  TF++      K G V+ A  +   M +
Sbjct: 353 SSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIE 412

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
               PN VTYN LM  +      D   K+   M      P+V +Y ILI  YC     + 
Sbjct: 413 RGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDE 472

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A +   EM   K L P S  +  ++  L +AG+    +EL +KM   G
Sbjct: 473 AKQLFDEM-SHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHG 519



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 162/326 (49%), Gaps = 5/326 (1%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           +   P  V    L + M N +G+ +Q  +       M   N++  V TFSILV    + G
Sbjct: 273 IGISPTVVTYNSLIYGMCN-SGQWKQASI---LFKEMLEWNMKPDVVTFSILVDALCKEG 328

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYT 256
           +  EA+  F +M +    PD + +S +I  +C+     E+ +  +  L     PDV+ ++
Sbjct: 329 VVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFS 388

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
             V  +C+ G +SEA+ +   M   G++PNV TY+ ++D  C   Q+  A  VF  M+  
Sbjct: 389 IWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNK 448

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           GC P+ +++N L++ + K+ R ++  Q++++M   G   ++IT+  LI   C+ G+   A
Sbjct: 449 GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAA 508

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            ++   M   GC P+  T++ +     K G ++ A  ++  +K  + +PN V   IL+  
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGG 568

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNV 462
              +   +   +L   +   E++P+V
Sbjct: 569 MCKAGKLEDAKELFSSLSIEELQPDV 594


>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 183/369 (49%), Gaps = 6/369 (1%)

Query: 123 RHGIPLLQVLSFFNWVT-ARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNV 179
           RH         FFNW +    E  +SP   +++E++++ G++R+F       D M  R  
Sbjct: 127 RHRSDWRPAYVFFNWASRCGXESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKG 186

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
                TF +L+ RY  A    EAV  F + +  G   D IAF  ++  LCR +    A+ 
Sbjct: 187 LXNERTFGVLLNRYAAAHKTEEAVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEF 246

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            F S K++F PD+     ++ GWC  G++ EA+R + ++  +  +P+ +TY I I++L +
Sbjct: 247 LFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTK 306

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G+++ A  +F  M E GC P+    N ++       R  + L+V  +M    C+ D  T
Sbjct: 307 AGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVAT 366

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN LI   CK  + E   ++L+ M +KGC PNA T+  + +   K  +V G   +  +M+
Sbjct: 367 YNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPG---ILERME 423

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
              C  N+  YN++++++        +     EME N + P+  TY I+I      G  +
Sbjct: 424 RNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMD 483

Query: 480 NAYKYIREM 488
           +A  Y ++M
Sbjct: 484 DALSYFKQM 492



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 7/237 (2%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           G +R+    W+ I   K +  + T   + I +    +AG  + AV  F  M E GC PD 
Sbjct: 273 GSLREAKRFWNDIITSKCKPDKFT---YGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDV 329

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
              + +I  LC K+R  EA      + ++  +PDV  Y +L++  C+     +   +  +
Sbjct: 330 AICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDD 389

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+  G  PN  TY  ++ +  +  ++     +   M   GC  NS  +N ++++++    
Sbjct: 390 MEQKGCLPNARTYGYLLKSTKKPEEVP---GILERMERNGCRMNSDCYNLILKLYMDWGY 446

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             K+    ++M+R G   D  TY  +I      G+++DA+     M   G  P   T
Sbjct: 447 ELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT 503



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 119/277 (42%), Gaps = 35/277 (12%)

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           +G  P    ++ ++D L R  +      +F EM +     N  TF  L+  +  A +TE+
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEE 208

Query: 341 VLQVYNQMKRLGCEADTITY----------------------------------NFLIDC 366
            ++++ + K LG E D I +                                  N +++ 
Sbjct: 209 AVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNG 268

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C  G L +A +  N ++   C P+  T+ +    ++K G ++ A +++  M +  C P+
Sbjct: 269 WCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPD 328

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
               N ++      K     L++ +EM E + +P+V TY  LI   C +  +   Y+ + 
Sbjct: 329 VAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLD 388

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +M ++ CL P +  Y  +L+  ++  ++    E +E+
Sbjct: 389 DMEQKGCL-PNARTYGYLLKSTKKPEEVPGILERMER 424



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 84/188 (44%), Gaps = 6/188 (3%)

Query: 345 YNQMKRLGCEADTI----TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           +N   R G E+        +N ++D   +  +  +  ++ + M ++    N  TF ++  
Sbjct: 139 FNWASRCGXESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLN 198

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
             +       A +++ K K L  E + + +  L+      K  +M   L    ++NE  P
Sbjct: 199 RYAAAHKTEEAVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHS-KKNEFPP 257

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           ++ +  +++  +C +G    A ++  ++I  KC KP    Y + +  L +AG+L    +L
Sbjct: 258 DIKSMNVILNGWCVLGSLREAKRFWNDIITSKC-KPDKFTYGIFINSLTKAGKLSTAVKL 316

Query: 521 VEKMVDRG 528
            + M ++G
Sbjct: 317 FQAMWEKG 324



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 35/174 (20%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLV 259
           EA+     M E  C PD   ++ +I  LC+ +R  +     D ++ K   P+   Y  L+
Sbjct: 347 EALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLL 406

Query: 260 -----------------RGWCRA---------------GNISEAERVFREMKMAGIQPNV 287
                            R  CR                G   +      EM+  G+ P+ 
Sbjct: 407 KSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQ 466

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGC--EPNSITFNNLMRVHVKASRTE 339
            TY+I+I  L   G++  A   F +M  +G   EP +    N M + +K    E
Sbjct: 467 RTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKEREAE 520


>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g62540, mitochondrial; Flags: Precursor
 gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 599

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 198/390 (50%), Gaps = 2/390 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   R  F H+   Y+ M+++  K RQF+     ++ M ++ + +T++TF+I ++ +
Sbjct: 181 FFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 239

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             A    +AV  F  M++Y         + ++  L R +   EAQ  FD LK++F P+++
Sbjct: 240 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 299

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+ GWCR  N+ EA R++ +M   G++P++  ++++++ L R  + + A  +F  M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  ++  ++R   K S  E  ++ ++ M   G + D   Y  LI       KL
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +   ++L  M  KG  P+  T+N + + ++         R+Y KM   + EP+  T+N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M+ +  +++ +M   +  EM +  + P+ N+Y +LI      G    A +Y+ EM+ +K 
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML-DKG 538

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +K     Y        R GQ +  EEL ++
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQR 568


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 178/335 (53%), Gaps = 2/335 (0%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVI 253
           R G   + +   + ++  G  PD+  ++ +I +LC+     EA+     + K    PD +
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           VYT ++ G+C+ GN+S A ++F EM+   I P++ TY+ VI  +C+ G++  A ++F EM
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           L  G EP+ +T+  L+  + KA   ++   V+NQM + G   + +TY  L D  CK+G++
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A ++L+ M RKG  PN  T+N I   + K+G++    ++  +M      P+T+TY  L
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M  +          +L + M    ++P + T+ +L+  +C  G   +  + I  M+ EK 
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML-EKG 587

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + P ++ +  +++Q      ++   E+ + M DRG
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 175/348 (50%), Gaps = 2/348 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            ++ ++  + + G  + A   F+ M      PD + ++ VI  +C+  +  EA+  F+ +
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K  EPD + YT L+ G+C+AG + EA  V  +M   G+ PNV TY+ + D LC+ G+I
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A+++  EM   G +PN  T+N ++    K    E+ +++  +M   G   DTITY  L
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D +CK G++  A ++L  M+ K   P   TFN++       G +    R+   M +   
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN  T+N LM+ +    +     ++ K M +  V P+ NTY ILI  +C   +   A+ 
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             +EM+ EK     ++ Y+ +++   +  +  +  +L E+M   G  A
Sbjct: 649 LHKEMV-EKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVA 695



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 146/308 (47%), Gaps = 1/308 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+  Y +AG   EA    N+M + G  P+ + ++ +   LC+      A      +
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K  +P+V  Y  +V G C+ GNI +  ++  EM +AG  P+  TY+ ++DA C+ G++
Sbjct: 479 SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEM 538

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +AH++   ML    +P  +TFN LM     +   E   ++   M   G   +  T+N L
Sbjct: 539 AKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSL 598

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +  +C    +    ++  +M  +G  P+++T+N++ +   K  ++  A  ++ +M +   
Sbjct: 599 MKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGY 658

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
                TY+ L++ F   K      KL +EM ++ +    + Y I + +    G+W    +
Sbjct: 659 SVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLE 718

Query: 484 YIREMIEE 491
              E + E
Sbjct: 719 LCDEFMTE 726



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 16/341 (4%)

Query: 199 AAEAVHAFNRM-----EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
            +++ H F  M     +++G  P  + F +   +L       EAQ  F  L       V+
Sbjct: 149 VSKSFHLFTEMLIYTYKDWGSHP--LVFDLYFQVLVENGFVLEAQKLFHKL---LRYGVV 203

Query: 254 VYTN-----LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           V  +     L R  C    I  A +VF E    G+  N  + +IV+  LC+ G++  AH+
Sbjct: 204 VSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHN 263

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  +M + G  P+ +++  ++  + +    +KVL++ +++K  G + D   YN +I   C
Sbjct: 264 LLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLC 323

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G++ +A ++L  M + G  P+   +  +     KLG+V+ A +++ +M+  K  P+ V
Sbjct: 324 KNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIV 383

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY  ++     S       ++  EM    +EP+  TY  LI  YC  G    A+    +M
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + +K L P    Y  +   L + G++    EL+ +M  +G 
Sbjct: 444 V-QKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 1/128 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            I+ M  + +     TF+ L+++Y            +  M + G  PD   ++I+I   C
Sbjct: 579 LIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHC 638

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + R   EA      + +K +      Y  L+RG+ +     EA ++F EM+  G+     
Sbjct: 639 KARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKD 698

Query: 289 TYSIVIDA 296
            Y I +D 
Sbjct: 699 IYDIFVDV 706


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 190/365 (52%), Gaps = 5/365 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V +   A   +D M     +  + T + LV     +G  AEA+   ++M EYGC P
Sbjct: 268 LEGRVSE---ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 324

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + +  V++++C+  + + A      ++++  + D + Y+ ++ G C+ G++  A  +F
Sbjct: 325 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM+M GI  N+ TY+I+I   C  G+      +  +M++    PN +TF+ L+   VK 
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 444

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            +  +  +++ +M   G   DTITY  LID  CK+  L+ A ++++ MV KGC+PN  TF
Sbjct: 445 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 504

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N++     K   ++    ++ KM       +TVTYN L+Q F      ++  +L +EM  
Sbjct: 505 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 564

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
            +V PN+ TY+IL+   C  G    A + I E IE+  ++    +Y +++  +  A ++ 
Sbjct: 565 RKVPPNIVTYKILLDGLCDNGESEKALE-IFEKIEKSKMELDIGIYNIIIHGMCNASKVD 623

Query: 516 KHEEL 520
              +L
Sbjct: 624 DAWDL 628



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 188/382 (49%), Gaps = 2/382 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N+  K  Q  LA   +  M+ RN+++    +SI++    + G    A + FN ME
Sbjct: 329 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 388

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G   + I ++I+I   C   R  +      D +K K  P+V+ ++ L+  + + G + 
Sbjct: 389 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 448

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE + +EM   GI P+  TY+ +ID  C+   + +A+ +   M+  GC+PN  TFN L+
Sbjct: 449 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 508

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA+R +  L+++ +M   G  ADT+TYN LI   C+ GKL  A ++   MV +   
Sbjct: 509 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 568

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+ ++   +   G+   A  ++ K++  K E +   YNI++     +   D    L
Sbjct: 569 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 628

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+P V TY I+I   C  G  + A    R+M EE    P    Y ++++   
Sbjct: 629 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM-EEDGHAPDGWTYNILIRAHL 687

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
             G   K  +L+E++   GF+ 
Sbjct: 688 GDGDATKSVKLIEELKRCGFSV 709



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 187/391 (47%), Gaps = 7/391 (1%)

Query: 143 EFVHSPDL-----YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           + +HS  L     +  + +   K +Q+DL       M+ + +   + T SI++  + R  
Sbjct: 176 DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 235

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYT 256
               A  A  ++ + G  P+ I FS +I+ LC + R SEA    D + +   +PD+I   
Sbjct: 236 KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN 295

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            LV G C +G  +EA  +  +M   G QPN  TY  V++ +C+ GQ   A ++  +M E 
Sbjct: 296 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 355

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
             + +++ ++ ++    K    +    ++N+M+  G   + ITYN LI   C  G+ +D 
Sbjct: 356 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 415

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            K+L  M+++  NPN  TF+++     K G +  A  ++ +M      P+T+TY  L+  
Sbjct: 416 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 475

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           F      D   ++   M     +PN+ T+ ILI  YC     ++  +  R+M   + +  
Sbjct: 476 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVA 534

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            +  Y  ++Q     G+L   +EL ++MV R
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSR 565



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 3/363 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F D++ SR +   +D FS L     +       +    +ME  G A +    SI+I+  C
Sbjct: 174 FRDMIHSRPLPTVID-FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 232

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R R+   A S    + K  +EP+ I ++ L+ G C  G +SEA  +   M   G +P++ 
Sbjct: 233 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 292

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T + +++ LC  G+   A  +  +M+E GC+PN++T+  ++ V  K+ +T   +++  +M
Sbjct: 293 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 352

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           +    + D + Y+ +ID  CK G L++A  + N M  KG   N  T+N++       G  
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           +   ++   M   K  PN VT+++L+  F          +L KEM    + P+  TY  L
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +C   H + A + +  M+ + C  P    + +++    +A ++    EL  KM  RG
Sbjct: 473 IDGFCKENHLDKANQMVDLMVSKGC-DPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531

Query: 529 FTA 531
             A
Sbjct: 532 VVA 534



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 150/299 (50%), Gaps = 1/299 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R +   V TFS+L+  +V+ G   EA      M   G APD I ++ +I   C++  
Sbjct: 422 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 481

Query: 234 ASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A    D +  K  +P++  +  L+ G+C+A  I +   +FR+M + G+  +  TY+ 
Sbjct: 482 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 541

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I   C  G++  A ++F EM+     PN +T+  L+        +EK L+++ ++++  
Sbjct: 542 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 601

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            E D   YN +I   C   K++DA  +  S+  KG  P   T+N++   + K G ++ A 
Sbjct: 602 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            ++ KM++    P+  TYNIL++           +KL +E++      + +T +++I M
Sbjct: 662 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM 720



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 149/334 (44%), Gaps = 72/334 (21%)

Query: 233 RASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           +A +A   F D +  +  P VI ++ L     +         + ++M++ GI  N+YT S
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           I+I+  CRC ++  A     +++++G EPN                              
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPN------------------------------ 255

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
                TIT++ LI+  C +G++ +A+++++ MV  G  P+  T N +   +   G    A
Sbjct: 256 -----TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 310

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE---------------- 455
             +  KM +  C+PN VTY  ++ +   S  T + ++L ++MEE                
Sbjct: 311 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 370

Query: 456 --------------NEVE-----PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                         NE+E      N+ TY ILI  +C  G W++  K +R+MI+ K + P
Sbjct: 371 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-INP 429

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               + +++    + G+L++ EEL ++M+ RG  
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 47/96 (48%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+      + D AW     +  + V+  V T++I++    + G  +EA   F +M
Sbjct: 608 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 667

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           EE G APD   ++I+I        A+++    + LK
Sbjct: 668 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 703


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 188/402 (46%), Gaps = 10/402 (2%)

Query: 137 WVTARPEFVH------SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            V AR  FV       SPD+  Y+ +I+  GK    +     +  M+       V T++ 
Sbjct: 216 LVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNA 275

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           L+  + + G   +A   F  M+  G   + + FS  +   C++    EA   F  ++ + 
Sbjct: 276 LINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRG 335

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             P+   YT+LV G C+AG + +A  +  EM   G+ PNV TY++++D LC+ G++  A 
Sbjct: 336 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEAD 395

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           +V + M   G + N + +  L+  H   + +E+ L + NQMK  G E D   Y  LI   
Sbjct: 396 NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CKD K+++A  +L+ M   G  PN   +  I   + K G  + A  +  K+ D   +PN 
Sbjct: 456 CKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNV 515

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VTY  L+     + S    +    +M E  ++PNV  Y  LI  +C +G  N A   + E
Sbjct: 516 VTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNE 575

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           MI +K +     VY  ++    +   LQ    L  KM++ G 
Sbjct: 576 MI-DKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 165/316 (52%), Gaps = 4/316 (1%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+   F+IVI  LC++    EA++ F  +K     PDV+ Y +L+ G+ + G++ E E++
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             EM+ +G   +V TY+ +I+   + G++ +A+  F EM   G   N +TF+  +    K
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
               ++ ++++ QM+  G   +  TY  L+D  CK G+L+DAI +L+ MV +G  PN  T
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           + ++   + K G V  A  +   M+    + N + Y  L+     + +++  L L  +M+
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRAGQ 513
              +E +V+ Y  LI   C     + A   + +M    C L+P + +Y  ++  L +AG+
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM--AGCGLRPNTVIYTTIMDALFKAGK 495

Query: 514 LQKHEELVEKMVDRGF 529
             +   L+ K++D GF
Sbjct: 496 ESEAVALLHKILDSGF 511



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 181/410 (44%), Gaps = 37/410 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K  + + A+ +   MK + V   V TFS  V  + + GL  EA+  F +M 
Sbjct: 273 YNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMR 332

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P++  ++ ++   C+  R  +A    D +      P+V+ YT +V G C+ G ++
Sbjct: 333 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 392

Query: 270 EAERVFREMKMAGIQPN--VYT---------------------------------YSIVI 294
           EA+ V   M+  G++ N  +YT                                 Y  +I
Sbjct: 393 EADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLI 452

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
             LC+  ++  A  +  +M   G  PN++ +  +M    KA +  + + + +++   G +
Sbjct: 453 WGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQ 512

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            + +TY  LID  CK G + +AI   N M   G +PN   +  +     K+G +N A  +
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL 572

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +M D     + V Y  L+  +    +      LK +M E+ ++ ++  Y   I+ +C 
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCN 632

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           M     A   + EMI    + P  +VY  ++++ ++ G +++   L  +M
Sbjct: 633 MNMMQEARGVLSEMIGTG-ITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 1/256 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   ++ MK++ +E+ V  +  L+    +     EA    ++M   G  P+ + ++ ++ 
Sbjct: 429 ALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMD 488

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L +  + SEA +    + D  F+P+V+ Y  L+ G C+AG+ISEA   F +M+  G+ P
Sbjct: 489 ALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDP 548

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV  Y+ +ID  C+ G + +A  +  EM++ G   + + + +L+  ++K +  +    + 
Sbjct: 549 NVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALK 608

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M   G + D   Y   I   C    +++A  VL+ M+  G  P+ + +N + R   KL
Sbjct: 609 TKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKL 668

Query: 406 GDVNGAHRMYGKMKDL 421
           G++  A  +  +M+ +
Sbjct: 669 GNMEEASSLQNEMESV 684



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 4/297 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV + D   + + LM+   V+     ++ L+  +     +  A+   N+M+  G   D 
Sbjct: 389 GKVAEAD---NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDV 445

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             +  +I  LC+ ++  EA+S    +      P+ ++YT ++    +AG  SEA  +  +
Sbjct: 446 SLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHK 505

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           +  +G QPNV TY  +ID LC+ G I+ A   F +M E+G +PN   +  L+    K   
Sbjct: 506 ILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGS 565

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             K + + N+M   G   D + Y  LID + K   L+DA  +   M+  G   +   +  
Sbjct: 566 LNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTC 625

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
                  +  +  A  +  +M      P+   YN L++ +    + +    L+ EME
Sbjct: 626 FISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 191/414 (46%), Gaps = 6/414 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           VI   C V       QVL+        P+ V     Y+ MI      R+  LA   +D +
Sbjct: 153 VISGFCKVNQIEAATQVLNRMKARGFLPDIVT----YNIMIGSLCNRRKLGLALTVLDQL 208

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
              N   TV T++IL+   +  G   EA+     M   G  PD   ++ +I  +C++   
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             A     SL  K  EPDVI Y  L+R +   G   E E++  EM   G +PN  TYSI+
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I +LCR G+I  A  V   M+E    P++ +++ L+    K  R +  + + + M   GC
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D + YN ++   CK+G    A+++ N +   GC PN S++N +   +   GD + A  
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 448

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           M   M     +P+ +TYN L+         +  + L  +ME++   P V +Y I++   C
Sbjct: 449 MVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 508

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            +   ++A     EMIE+ C +P  + Y ++++ +  AG   +  EL   +  R
Sbjct: 509 KVRRIDDAIGMFAEMIEKGC-RPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 225/492 (45%), Gaps = 21/492 (4%)

Query: 47  PDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHS 106
           P  P  SP+    S   H+ I      NPN   NS  S       P + +  ++   AH 
Sbjct: 20  PHCPPFSPQLKPTSHSHHTSIVTCRNPNPNDGYNSRNS-------PKVGVS-AEARPAHL 71

Query: 107 IS----PSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
            S     + +  ++ +SC        L  L         P+ +    L     N     +
Sbjct: 72  QSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNF----K 127

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
             + A   +++++S + E  V  ++ ++  + +      A    NRM+  G  PD + ++
Sbjct: 128 NIEKASRVMEILES-HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYN 186

Query: 223 IVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           I+I  LC +R+   A +  D  L D   P VI YT L+      G I+EA ++  EM   
Sbjct: 187 IMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 246

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+ P++YTY+ +I  +C+ G + RA ++   +   GCEP+ I++N L+R  +   + ++ 
Sbjct: 247 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEG 306

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            ++  +M   GCE + +TY+ LI   C+ G++++AI VL  M+ K   P+  +++ +   
Sbjct: 307 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 366

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K G ++ A  +   M    C P+ V YN ++     + + +  L++  ++      PN
Sbjct: 367 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 426

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V++Y  +I+     G  + A   +  MI  K + P    Y  ++  L R G +++   L+
Sbjct: 427 VSSYNTMISALWSCGDRSRALGMVPAMI-SKGIDPDEITYNSLISCLCRDGLVEEAIGLL 485

Query: 522 EKMVDRGFTARP 533
           + M   GF  RP
Sbjct: 486 DDMEQSGF--RP 495


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 204/412 (49%), Gaps = 21/412 (5%)

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
           G   G  + Q +S F+ + +     ++  +   ++ L  ++ Q   A      M++    
Sbjct: 34  GFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLC-EIGQMSSALKLFREMQAGPFL 92

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
            T  + +IL+R +  AG    A+  F  M+  G  PD  ++ I++S L    R +EA + 
Sbjct: 93  PTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHAL 149

Query: 241 FDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           F ++     PD++ Y  L+ G+C+ G   EA+ + +E+  AG +PNV+TYSI+I+  C+ 
Sbjct: 150 FSAMT--CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKL 207

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            ++  A +VF +M+E  C PN++TFN L+    KA   E  ++++ +M+++GC+A  +TY
Sbjct: 208 DKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTY 267

Query: 361 NFLIDCHCKD-GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           N LID  CK  G +  A+ + N +   G  P   T+N + +  S+    N   R+   M 
Sbjct: 268 NTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMH 325

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
              C+P+ +TYN L+    ++   +   +L   M      PNV T+  LI   C      
Sbjct: 326 AEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLC------ 376

Query: 480 NAYKYIREM--IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            A K + E   I ++   P  + +  ++    +AG +    E+++ M+  GF
Sbjct: 377 -AQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGF 427



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 171/343 (49%), Gaps = 11/343 (3%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L+R + + G   +AV  F+ M+  G  P+    + ++  LC   + S A   F  +
Sbjct: 27  TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM 86

Query: 245 K-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +   F P    +  L+RG+  AG   E    F+EMK +G++P++ +Y I++ AL   G++
Sbjct: 87  QAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMKASGVEPDLESYHILLSALSDSGRM 143

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             AH +F+ M    C P+ +T+N LM  + K  +T +   +  ++ + G E +  TY+ +
Sbjct: 144 AEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 200

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+C+CK  K+E+A +V   M+   C PNA TFN +     K G +  A +++ +M+ + C
Sbjct: 201 INCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGC 260

Query: 424 EPNTVTYNILMQMFATSK-STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           +   VTYN L+      +      + L  ++E   + P + TY  LI  +      N+  
Sbjct: 261 KATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFS--ERANDGL 318

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           + +  M  E C KP    Y  ++  L  A +++  + L   M 
Sbjct: 319 RLLCHMHAEGC-KPDVITYNCLISGLCSANRVEDAQRLFNGMA 360



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 145/284 (51%), Gaps = 11/284 (3%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFF 241
           + T+++L+  Y + G   EA      + + G  P+   +SI+I+  C+  +  EA + F 
Sbjct: 159 IMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFM 218

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC- 300
             ++    P+ + +  L+ G+C+AG + +A ++F EM+  G +  + TY+ +ID+LC+  
Sbjct: 219 KMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 278

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G +  A D+F ++   G  P  +T+N+L++    + R    L++   M   GC+ D ITY
Sbjct: 279 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITY 336

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N LI   C   ++EDA ++ N M    C PN +TFN + R +     V  A  +  +M  
Sbjct: 337 NCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEARNILDRMT- 392

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
               P+  T+N ++  F  + +     ++ K+M ++   PN  T
Sbjct: 393 ---APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYT 433



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 130/272 (47%), Gaps = 30/272 (11%)

Query: 232 RRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           R+  +A   F + L   F P+   Y  L+RG+C+ G + +A  VF +MK +G+ PN  T 
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV------------HVKASRT 338
           + ++  LC  GQ++ A  +F EM      P S + N L+R              +KAS  
Sbjct: 64  NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGV 123

Query: 339 EKVLQVYNQM-----------------KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           E  L+ Y+ +                   + C  D +TYN L+D +CK G+  +A  ++ 
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMK 183

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            +++ G  PN  T+++I  C  KL  V  A  ++ KM +  C PN VT+N L+  F  + 
Sbjct: 184 EILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAG 243

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
             +  +KL  EME+   +  + TY  LI   C
Sbjct: 244 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 275



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 7/262 (2%)

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+F+E+      PN +TY+++I   C+ GQ+ +A  VF++M   G  PN+ T N L+
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  +    L+++ +M+       + ++N L+      G+   AI+    M   G  
Sbjct: 68  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVE 124

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  +++++   +S  G +  AH ++  M    C P+ +TYN+LM  +     T     L
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSL 181

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KE+ +   EPNV TY I+I  YC +     A++   +MIE  C+ P +  +  ++    
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV-PNAVTFNTLIAGFC 240

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
           +AG L+   +L  +M   G  A
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKA 262



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 11/246 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   K+ + + AW     M   N      TF+ L+  + +AG+  +A+  F  ME
Sbjct: 197 YSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEME 256

Query: 211 EYGCAPDKIAFSIVISILCRKRRAS-EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           + GC    + ++ +I  LC+KR     A   F+ L+     P ++ Y +L++G+    N 
Sbjct: 257 KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN- 315

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +  R+   M   G +P+V TY+ +I  LC   ++  A  +F  M    C PN  TFN L
Sbjct: 316 -DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFL 371

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +R      + E+   + ++M       D  T+N +I   CK G + DA +V+  M++ G 
Sbjct: 372 IRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGF 427

Query: 389 NPNAST 394
            PN  T
Sbjct: 428 YPNTYT 433



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 4/154 (2%)

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           K + A+++   ++     PNA T+N++ R   K G ++ A  ++  MK     PN  T N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            L+            LKL +EM+     P   ++ IL+    G      A ++ +EM + 
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLR---GFFMAGRAIEFFKEM-KA 120

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             ++P    Y ++L  L  +G++ +   L   M 
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAMT 154



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
           +++  D  L+L KE+      PN +TY +LI  +C  G  + A     +M +   L P +
Sbjct: 2   SARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-KSSGLLPNA 60

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKM 524
           S    +L  L   GQ+    +L  +M
Sbjct: 61  STMNTLLLGLCEIGQMSSALKLFREM 86


>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
          Length = 503

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 195/398 (48%), Gaps = 10/398 (2%)

Query: 131 VLSFFNWVTARPE-FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
            L FF W  +R   + H+P     M++L GK RQ D  W  +  M  R + +TVDT +  
Sbjct: 101 ALGFFLWAQSRGGGYSHTPYACSRMVDLLGKTRQIDRMWDLLSEMHCRGL-VTVDTVAKS 159

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +RR   A    +A+  F+++E+ G   +    ++++  LC++++   A+  F  L     
Sbjct: 160 IRRLAAARKWRDAILLFDQLEDLGLERNTETMNVLLDALCKEKKVELAREVFVMLSPHIA 219

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD   +   V GWC    I EA     EMK  G  P V TY+ V++A C+     R ++V
Sbjct: 220 PDAYTFNIFVHGWCSVRRIDEALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFRRVYEV 279

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M   GC PN IT+  +M    K  R E+ L V ++MK  GC+ DT+ YN LI+   +
Sbjct: 280 LDSMGSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGR 339

Query: 370 DGKLEDAIKVLN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            G L +A +V    M R G   N +T+N +   + + G  + A  +  +M+   C+P+  
Sbjct: 340 AGHLFEANQVFRVEMPRNGVLRNVATYNTMISILCQYGRDDDALGVLKEMEAQSCKPDLQ 399

Query: 429 TYN-ILMQMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           TY  +L  +         V +L  E+ + N +  +++TY +LI   C +G  + AY    
Sbjct: 400 TYQPLLRLLLGRRGQAAAVHRLLSELRDRNGLGLDLDTYTLLIHGLCKVGETDWAYLLYD 459

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           EM+  + + P     E++L +++R    Q  E  VE++
Sbjct: 460 EMVGSE-IVPRPRTCELLLSEMQR----QNMEAYVERI 492


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 195/418 (46%), Gaps = 37/418 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++    +   +D AW     M    V   V +F+IL+  + R G   EA+  +  M 
Sbjct: 168 YNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMR 227

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD ++FS +I +  R+ +   A ++   ++     PD ++YT ++ G+CRAG +S
Sbjct: 228 HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMS 287

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A RV  EM   G  P+V TY+ +++ LC+  ++  A  +  EM E G  P+  TF  L+
Sbjct: 288 DALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 347

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYN---------------------------- 361
             +    + +K LQ+++ M       D +TYN                            
Sbjct: 348 HGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIF 407

Query: 362 -------FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                   LID HC+ G++EDA   L+ M+ KG  PN  T+N I +   + G+V+   + 
Sbjct: 408 PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKF 467

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             KM   K  P+ +TYN L+  +          KL   ME+ +V+P+V TY +LI  +  
Sbjct: 468 LQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 527

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
            G+   A  +I E +  K ++P    Y  ++     AG  ++  +L ++M+ RG   R
Sbjct: 528 HGNVQEA-GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKR 584



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 182/367 (49%), Gaps = 2/367 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  +FD     I  M+ R V   V T +++V    RAG A  A+   + M   G  P  +
Sbjct: 107 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIV 166

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++ V+  LCR     +A   F  + D    PDV  +T L+ G+CR G I EA ++++EM
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 226

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  GI+P++ ++S +I    R G++  A     EM   G  P+ + +  ++    +A   
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 286

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
              L+V ++M   GC  D +TYN L++  CK+ +L DA  +LN M  +G  P+  TF  +
Sbjct: 287 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 346

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                  G ++ A +++  M + +  P+ VTYN L+         D    L  +M   E+
Sbjct: 347 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 406

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            PN  TY ILI  +C  G   +A+ ++ EMI +  L P    Y  +++   R+G + K +
Sbjct: 407 FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL-PNIMTYNSIIKGYCRSGNVSKGQ 465

Query: 519 ELVEKMV 525
           + ++KM+
Sbjct: 466 KFLQKMM 472



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 191/380 (50%), Gaps = 4/380 (1%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    + +  + R  D   A   +D M S+ ++  + T++ +++   R+G+  +A   
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 187

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M+++G APD  +F+I+I   CR     EA   +  ++ +  +PD++ ++ L+  + R
Sbjct: 188 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 247

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A    REM+  G+ P+   Y++VI   CR G ++ A  V  EM+  GC P+ +T
Sbjct: 248 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 307

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K  R      + N+M+  G   D  T+  LI  +C +GKL+ A+++ ++M+
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +   P+  T+N +   + + GD++ A+ ++  M   +  PN VTY+IL+         +
Sbjct: 368 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
                  EM    + PN+ TY  +I  YC  G+ +   K++++M+  K + P    Y  +
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTL 486

Query: 505 LQQLRRAGQLQKHEELVEKM 524
           +    +  ++    +L+  M
Sbjct: 487 IHGYIKEDKMHDAFKLLNMM 506



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 5/303 (1%)

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           + R+R A   +     L     P   V+  L+R + ++    EA   FR +    +    
Sbjct: 1   MSRRRGACRREIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPA 60

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
              + ++ AL R G    A D +  +     E N+ T N ++  + KA   +KV  V ++
Sbjct: 61  AASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISE 120

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M++     D +T+N ++D   + G  E A+ +++SMV KG  P   T+N + + + + G 
Sbjct: 121 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 180

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            + A  ++ +M D    P+  ++ IL+  F      +  LK+ KEM    ++P++ ++  
Sbjct: 181 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 240

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKC--LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           LI ++   G  ++A  Y+REM   +C  L P   +Y MV+    RAG +     + ++MV
Sbjct: 241 LIGLFARRGKMDHAMAYLREM---RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 297

Query: 526 DRG 528
             G
Sbjct: 298 GCG 300



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 2/314 (0%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERV 274
           P    F ++I    + R+  EA   F  + D   P        L+    RAG    A   
Sbjct: 23  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           +R +  +  + N YT +I++   C+  +  +   V +EM +    P+ +T N ++    +
Sbjct: 83  YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A   E  + + + M   G +   +TYN ++   C+ G  + A +V   M   G  P+  +
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 202

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           F ++     ++G++  A ++Y +M+    +P+ V+++ L+ +FA     D  +   +EM 
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              + P+   Y ++I  +C  G  ++A +   EM+   CL P    Y  +L  L +  +L
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL-PDVVTYNTLLNGLCKERRL 321

Query: 515 QKHEELVEKMVDRG 528
              E L+ +M +RG
Sbjct: 322 LDAEGLLNEMRERG 335



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 9/217 (4%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           RP+ V     Y+ +I+  G  RQ DL  A    D M SR +     T+SIL+  +   G 
Sbjct: 372 RPDIV----TYNTLID--GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 425

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTN 257
             +A    + M   G  P+ + ++ +I   CR    S+ Q F   +  +K  PD+I Y  
Sbjct: 426 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 485

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+ G+ +   + +A ++   M+   +QP+V TY+++I+     G +  A  +F +M   G
Sbjct: 486 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 545

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
            EP+  T+ +++  HV A  +++  Q++++M + G E
Sbjct: 546 IEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582


>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14820, mitochondrial; Flags: Precursor
 gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
 gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 197/390 (50%), Gaps = 2/390 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   R  F H    Y+ M+++  K RQF+     ++ M ++ + +T++TF+I ++ +
Sbjct: 180 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 238

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
             A    +AV  F  M++Y         + ++  L R +   EAQ  FD LK++F P+++
Sbjct: 239 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 298

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT L+ GWCR  N+ EA R++ +M   G++P++  ++++++ L R  + + A  +F  M
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G  PN  ++  ++R   K S  E  ++ ++ M   G + D   Y  LI       KL
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +   ++L  M  KG  P+  T+N + + ++         R+Y KM   + EP+  T+N++
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M+ +  +++ +M   +  EM +  + P+ N+Y +LI      G    A +Y+ EM+ +K 
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML-DKG 537

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +K     Y        R GQ +  EEL ++
Sbjct: 538 MKTPLIDYNKFAADFHRGGQPEIFEELAQR 567


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 204/369 (55%), Gaps = 6/369 (1%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D+ + + +++K R +   ++TF+I +    RAG   +A  A   M+ +G +P+ + ++ +
Sbjct: 183 DVEYVYKEMIKRR-IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTL 241

Query: 225 ISILCRKRRASE---AQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           +   C++  A +   A++F  + L +K  P+ + +  L+ G+C+  N++ A++ F EM+ 
Sbjct: 242 VDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQK 301

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G++PN+ TY+ +I+ LC  G++  A D++ +M+ +G +PN +T+N L+    K    ++
Sbjct: 302 QGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKE 361

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
             +V++ + +     + IT+N +ID +CK+G +E+   + +SM+ +G  PN ST+N +  
Sbjct: 362 ATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIA 421

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + +  D+  A  +  +M++   + + VTYNIL+     +  +    KL  EM    ++P
Sbjct: 422 GLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 481

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           N  TY  L+  YC  G    A   +R  +E++  +P    Y ++++   +  +L+    L
Sbjct: 482 NHVTYNTLMDGYCMEGKLKAALN-VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGL 540

Query: 521 VEKMVDRGF 529
           + +M+++G 
Sbjct: 541 LNEMLEKGL 549



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 147/285 (51%), Gaps = 1/285 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+  + +    A A  AF  M++ G  P+ + ++ +I+ LC   +  EA   +D +
Sbjct: 275 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                +P+++ Y  L+ G+C+   + EA +VF ++    + PNV T++ +IDA C+ G +
Sbjct: 335 VGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMM 394

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                + + ML+ G  PN  T+N L+    +    +   ++ N+M+  G + D +TYN L
Sbjct: 395 EEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNIL 454

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+ K  +A K+LN M   G  PN  T+N +       G +  A  +  +M+  + 
Sbjct: 455 IDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK 514

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           +PN VTYN+L++ +      +    L  EM E  + PN  TY I+
Sbjct: 515 QPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 172/410 (41%), Gaps = 21/410 (5%)

Query: 125 GIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           G+    VL FF W        +  +   ++++     +++     F+D            
Sbjct: 55  GVDSELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSS 114

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            F  L+    R G  A  +               +A+   + + C     + A+ +    
Sbjct: 115 VFHSLLLDGGRPGATALIIDML-----------VLAYVKNLELHCAYEAFTRAKDY---- 159

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
              F+  +     L+    +   I + E V++EM    I  N+ T++I I+ LCR G++ 
Sbjct: 160 --GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLN 217

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA---DTITYN 361
           +A D   +M   G  PN +T+N L+  + K     K+ +    MK +       + +T+N
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFN 277

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID  CKD  +  A K    M ++G  PN  T+N +   +   G +  A  ++ KM  L
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL 337

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +PN VTYN L+  F   K      K+  ++ + E+ PNV T+  +I  YC  G     
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           +     M++E  L P  S Y  ++  L R   LQ  +EL+ +M ++G   
Sbjct: 398 FSLCSSMLDEGIL-PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKG 446



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 1/214 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K +    A    D +  + +   V TF+ ++  Y + G+  E     + M 
Sbjct: 346 YNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSML 405

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ +I+ LCRK+    A+   + +++K  + DV+ Y  L+ G C+     
Sbjct: 406 DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSR 465

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            AE++  EM   G++PN  TY+ ++D  C  G++  A +V   M +   +PN +T+N L+
Sbjct: 466 NAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLI 525

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + + K ++ E    + N+M   G   +  TY+ +
Sbjct: 526 KGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 1/188 (0%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           ++ E V +   ++ MI+   K    +  +     M    +   V T++ L+    R    
Sbjct: 370 SKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDL 429

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNL 258
             A    N ME  G   D + ++I+I  LC+  ++  A+   + + +   +P+ + Y  L
Sbjct: 430 QAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTL 489

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+C  G +  A  V   M+    QPNV TY+++I   C+  ++  A+ +  EMLE G 
Sbjct: 490 MDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGL 549

Query: 319 EPNSITFN 326
            PN  T++
Sbjct: 550 NPNRTTYD 557


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 2/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++   GK R  ++    +  M+   +   V TF+I +R   RAG   EA   F RM+
Sbjct: 230 YSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD 289

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD + ++++I  LC   +   A+  F  +K +  +PD ++Y  L+  +   G++ 
Sbjct: 290 DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD 349

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             +  + +M+  G  P+V T++I++D LC+      A   F  M + G  PN  T+N L+
Sbjct: 350 TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              ++A R E  L++   M+ +G +    TYN  ID   K G+   A++    M  KG  
Sbjct: 410 CGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIV 469

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN    N     ++++G +  A  M+  +++    P++VTYN++M+ ++     D  + L
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM  N  EP+V     LI      G  + A++    M + K L P    Y  +L  L 
Sbjct: 530 LSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK-LSPTVVTYNTLLSGLG 588

Query: 510 RAGQLQKHEELVEKMVDR 527
           + G++QK  EL E M+++
Sbjct: 589 KEGRVQKAIELFESMIEK 606



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 156/304 (51%), Gaps = 2/304 (0%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           +++ME  G  PD + F+I++ +LC+ R   EA + FD + K    P++  Y  L+ G  R
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG I +A ++   M+  G+QP  YTY+I ID   + G+  +A + F +M   G  PN + 
Sbjct: 415 AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            N  +    +  R  +   ++N ++  G   D++TYN ++ C+ K G++++A+ +L+ M+
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           R GC P+    N +   + K G V+ A +M+ +MKD+K  P  VTYN L+          
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             ++L + M E +  PN  ++  L+  +C       A K   +M    C KP    Y  V
Sbjct: 595 KAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC-KPDVLTYNTV 653

Query: 505 LQQL 508
           +  L
Sbjct: 654 IYGL 657



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 178/375 (47%), Gaps = 5/375 (1%)

Query: 155 INLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           +++ G +RQ       ++ M+     +   +++ L+   +++G   EA+  + RM   G 
Sbjct: 167 LSIRGGLRQMTTV---LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAER 273
            P    +S ++  L +KR +         ++D    P+V  +T  +R   RAG I EA  
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +FR M   G  P++ TY+++IDALC  GQ+  A ++F +M   G +P+ + +  L+    
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
                +   + ++QM+  G   D +T+  L+D  CK    ++A    + M ++G  PN  
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T+N +   + + G +  A ++ G M+ +  +P   TYNI +  F  S  T   ++  ++M
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKM 463

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           +   + PN+      +     MG    A K +   + E  L P S  Y M+++   + GQ
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREA-KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 514 LQKHEELVEKMVDRG 528
           + +   L+ +M+  G
Sbjct: 523 VDEAVNLLSEMIRNG 537



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 164/343 (47%), Gaps = 3/343 (0%)

Query: 167  AWHFID-LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
            A+   D   K   +  T+ +++ L+   +      +A   F  M+  GCAPD   F++++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 226  SILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            ++  +  + +E    + + +  + +PD I Y  ++    ++ N+ +A   F ++  +  +
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 285  PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
            P   TY  +ID L + G++  A  +F EM + GC+PN   FN L+  + K   TE   Q+
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 345  YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            + +M   G   D  +Y  L+DC C  G++++A+   N +   G +P+   +N I   + K
Sbjct: 951  FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 405  LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
               +  A  +Y +M++    P+  TYN LM     +   +   ++ +E++   +EP+V T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070

Query: 465  YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            Y  LI  Y    +  +AY   + M+ + C  P    Y  +  Q
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGC-NPNIGTYAQLPNQ 1112



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/533 (21%), Positives = 208/533 (39%), Gaps = 114/533 (21%)

Query: 105  HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVR 162
            + ++P +V + +   C  + G    QV    N ++        PD+   + +I+   K  
Sbjct: 501  NGLAPDSVTYNMMMKCYSKVG----QVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556

Query: 163  QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP------ 216
            + D AW   D MK   +  TV T++ L+    + G   +A+  F  M E  C+P      
Sbjct: 557  RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFN 616

Query: 217  -----------------------------DKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
                                         D + ++ VI  L ++ + + A  FF  LK  
Sbjct: 617  TLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS 676

Query: 248  FEPDVIVYTNLVRGWCRAGNISEA---------------ERVFREMKMAGI-------QP 285
              PD +    L+ G  + G I +A                R F E  M G        + 
Sbjct: 677  MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA 736

Query: 286  NVYTYSIVIDALCR--------------------------------------------CG 301
             ++   +V++ +CR                                             G
Sbjct: 737  IIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796

Query: 302  QITRAH------DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            ++   H      D+F +M  VGC P++ TFN L+ VH K+ +  ++ ++Y +M    C+ 
Sbjct: 797  ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP 856

Query: 356  DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
            D ITYN +I    K   L+ A+     +V     P   T+  +   ++K+G +  A R++
Sbjct: 857  DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916

Query: 416  GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             +M D  C+PN   +NIL+  +     T+   +L K M    + P++ +Y IL+   C  
Sbjct: 917  EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976

Query: 476  GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G  + A  Y  E+ +   L P    Y  ++  L ++ ++++   L  +M +RG
Sbjct: 977  GRVDEALYYFNEL-KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 3/228 (1%)

Query: 134  FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
            F++ V++  +F  +P  Y  +I+   KV + + A    + M     +     F+IL+  Y
Sbjct: 881  FYDLVSS--DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGY 938

Query: 194  VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
             + G    A   F RM   G  PD  +++I++  LC   R  EA  +F+ LK    +PD 
Sbjct: 939  GKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDF 998

Query: 253  IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
            I Y  ++ G  ++  + EA  ++ EM+  GI P++YTY+ ++  L   G + +A  ++ E
Sbjct: 999  IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058

Query: 313  MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +   G EP+  T+N L+R +  +   E    VY  M   GC  +  TY
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 138/297 (46%), Gaps = 2/297 (0%)

Query: 233 RASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           +  +  + F+ ++ K    D+  Y  + +     G + +   V  +M+ AG   N Y+Y+
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I  L + G    A +V+  M+  G +P+  T++ LM    K   +E V+ +  +M+ L
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G   +  T+   I    + GK+++A ++   M  +GC P+  T+ ++   +   G +  A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ KMK    +P+ V Y  L+  F      D   +   +ME +   P+V T+ IL+ +
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C    ++ A+     M ++  L P    Y  ++  L RAG+++   +L+  M   G
Sbjct: 377 LCKARDFDEAFATFDVMRKQGIL-PNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 1/172 (0%)

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           T T NF+++      K+ED   V   M +K    +  T+  IF+ +S  G +     +  
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           KM+      N  +YN L+ +   S      L++ + M    ++P++ TY  L+       
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                   ++EM E+  L+P    + + ++ L RAG++ +  E+  +M D G
Sbjct: 242 DSEMVMVLLKEM-EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG 292


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 224/470 (47%), Gaps = 18/470 (3%)

Query: 70  HHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQI----STAHSISPSTVRHVIEKSCGVRHG 125
           HHR +       +  LNP+F   SL     Q+    S   + +  +V   I    G+  G
Sbjct: 100 HHRLSTQGQRILDSLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSVSFDI---LGIIKG 156

Query: 126 IPLLQ----VLSFFNWVTARPEF--VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNV 179
           +   +     L  F +V  R +F  + S  +   +I++ GK  +   A   +  +++  V
Sbjct: 157 LVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGV 216

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQ 238
            I +  ++ L+  Y   G   EAV  F ++EE GC P  I +++++++  +     S+  
Sbjct: 217 HIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIA 276

Query: 239 SFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI-SEAERVFREMKMAGIQPNVYTYSIVIDA 296
              DS+K     PD+  Y  L+   CR G++  EA  VF EMK AG  P+  TY+ ++D 
Sbjct: 277 GLVDSMKSSGVAPDLYTYNTLISS-CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDV 335

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
             +  +   A +V  EM   G  P+ +T+N+L+  + +    ++ +++ +QM + G + D
Sbjct: 336 YGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPD 395

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TY  L+    K GK + A+KV   M   GC PN  TFN + +     G+     +++ 
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           ++K  +C P+ VT+N L+ +F  +     V  + KEM+     P  +T+  LI+ Y   G
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++ A    R M+ +  + P  S Y  VL  L R G  ++ E+++ +M D
Sbjct: 516 FFDQAMAIYRRML-DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD 564



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 187/420 (44%), Gaps = 44/420 (10%)

Query: 151 YHEMINLAGKVRQFDLAWH----FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           Y+ ++N+ GK+    + W      +D MKS  V   + T++ L+    R  L  EA   F
Sbjct: 258 YNVILNVYGKM---GMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVF 314

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF------------------------D 242
             M+  G +PDK+ ++ ++ +  + RR  EA                            D
Sbjct: 315 EEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARD 374

Query: 243 SLKDK------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
            L D+             +PDV  YT L+ G+ + G    A +VF EM++AG QPN+ T+
Sbjct: 375 GLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTF 434

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + +I      G       VF E+    C P+ +T+N L+ V  +     +V  V+ +MKR
Sbjct: 435 NALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 494

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G   +  T+N LI  + + G  + A+ +   M+  G  P+ ST+N +   +++ G    
Sbjct: 495 AGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQ 554

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           + ++  +MKD +C+PN +TY  L+  +A  K  + +  L +E+    +EP     + L+ 
Sbjct: 555 SEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVL 614

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +Y          +   E+  E+   P  +    ++    R   + K  E++  + D GFT
Sbjct: 615 VYSKSDLLTETERAFLEL-REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFT 673



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 1/306 (0%)

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           DTF+ L+  Y R G   +A+  + RM + G  PD   ++ V++ L R     +++     
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAE 561

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +KD + +P+ + Y +L+  +     +     +  E+    I+P       ++    +   
Sbjct: 562 MKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDL 621

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +T     F E+ E G  P+  T N ++ ++ +     K  ++ N +K  G      TYN 
Sbjct: 622 LTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNS 681

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  + +    E +  +L  ++ KG  P+  +FN +     + G +  A R++ +MKD  
Sbjct: 682 LMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFG 741

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN  +  +A+       + + K M +N  +PN NTY  LI  +C +   + A 
Sbjct: 742 LAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEAS 801

Query: 483 KYIREM 488
            +I  +
Sbjct: 802 SFISNL 807



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/384 (21%), Positives = 173/384 (45%), Gaps = 4/384 (1%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++     L+G  K  + D A    + M+    +  + TF+ L++ +   G   E +  
Sbjct: 394 PDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKV 453

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  ++   C PD + ++ ++++  +    SE    F  +K   F P+   +  L+  + R
Sbjct: 454 FEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSR 513

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G   +A  ++R M  AG+ P++ TY+ V+ AL R G   ++  V AEM +  C+PN +T
Sbjct: 514 CGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELT 573

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+  +      E++  +  ++     E   +    L+  + K   L +  +    + 
Sbjct: 574 YCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR 633

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G +P+ +T N +     +   V+  + +   +KD    P+  TYN LM M++ ++  +
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFE 693

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               + +E+    ++P++ ++  +I  YC  G    A +   EM ++  L P    Y   
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEM-KDFGLAPDVITYNTF 752

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           +          +  ++V+ M+  G
Sbjct: 753 IASYASDSMFIEAIDVVKYMIKNG 776



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/317 (20%), Positives = 134/317 (42%), Gaps = 36/317 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV   D ++ +I+   +   FD A      M    V   + T++ ++    R GL  
Sbjct: 494 RAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWE 553

Query: 201 EAVHAFNRMEEYGCAPDKIAF-----------------------------------SIVI 225
           ++      M++  C P+++ +                                     ++
Sbjct: 554 QSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLV 613

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            +  +    +E +  F  L+++ F PD+     +V  + R   +S+   +   +K +G  
Sbjct: 614 LVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFT 673

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P++ TY+ ++    R     ++ D+  E++  G +P+ I+FN ++  + +  R ++  ++
Sbjct: 674 PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + +MK  G   D ITYN  I  +  D    +AI V+  M++ GC PN +T+N +     K
Sbjct: 734 FAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCK 793

Query: 405 LGDVNGAHRMYGKMKDL 421
           L   + A      +++L
Sbjct: 794 LNRRDEASSFISNLRNL 810



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 3/145 (2%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S   Y+ ++ +  +   F+ +   +  + ++ ++  + +F+ ++  Y R G   EA 
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
             F  M+++G APD I ++  I+         EA      + K+  +P+   Y +L+  +
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWF 791

Query: 263 CRAGNISEAERVFREMKMAGIQPNV 287
           C+     EA      ++   + P+V
Sbjct: 792 CKLNRRDEASSFISNLR--NLDPSV 814


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 224/470 (47%), Gaps = 18/470 (3%)

Query: 70  HHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQI----STAHSISPSTVRHVIEKSCGVRHG 125
           HHR +       +  LNP+F   SL     Q+    S   + +  +V   I    G+  G
Sbjct: 100 HHRLSTQGQRILDSLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSVSFDI---LGIIKG 156

Query: 126 IPLLQ----VLSFFNWVTARPEF--VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNV 179
           +   +     L  F +V  R +F  + S  +   +I++ GK  +   A   +  +++  V
Sbjct: 157 LVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGV 216

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQ 238
            I +  ++ L+  Y   G   EAV  F ++EE GC P  I +++++++  +     S+  
Sbjct: 217 HIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIA 276

Query: 239 SFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI-SEAERVFREMKMAGIQPNVYTYSIVIDA 296
              DS+K     PD+  Y  L+   CR G++  EA  VF EMK AG  P+  TY+ ++D 
Sbjct: 277 GLVDSMKSSGVAPDLYTYNTLISS-CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDV 335

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
             +  +   A +V  EM   G  P+ +T+N+L+  + +    ++ +++ +QM + G + D
Sbjct: 336 YGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPD 395

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TY  L+    K GK + A+KV   M   GC PN  TFN + +     G+     +++ 
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           ++K  +C P+ VT+N L+ +F  +     V  + KEM+     P  +T+  LI+ Y   G
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++ A    R M+ +  + P  S Y  VL  L R G  ++ E+++ +M D
Sbjct: 516 FFDQAMAIYRRML-DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD 564



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 187/420 (44%), Gaps = 44/420 (10%)

Query: 151 YHEMINLAGKVRQFDLAWH----FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           Y+ ++N+ GK+    + W      +D MKS  V   + T++ L+    R  L  EA   F
Sbjct: 258 YNVILNVYGKM---GMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVF 314

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF------------------------D 242
             M+  G +PDK+ ++ ++ +  + RR  EA                            D
Sbjct: 315 EEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARD 374

Query: 243 SLKDK------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
            L D+             +PDV  YT L+ G+ + G    A +VF EM++AG QPN+ T+
Sbjct: 375 GLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTF 434

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + +I      G       VF E+    C P+ +T+N L+ V  +     +V  V+ +MKR
Sbjct: 435 NALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 494

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G   +  T+N LI  + + G  + A+ +   M+  G  P+ ST+N +   +++ G    
Sbjct: 495 AGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQ 554

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           + ++  +MKD +C+PN +TY  L+  +A  K  + +  L +E+    +EP     + L+ 
Sbjct: 555 SEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVL 614

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +Y          +   E+  E+   P  +    ++    R   + K  E++  + D GFT
Sbjct: 615 VYSKSDLLTETERAFLEL-REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFT 673



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 140/306 (45%), Gaps = 1/306 (0%)

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           DTF+ L+  Y R G   +A+  + RM + G  PD   ++ V++ L R     +++     
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAE 561

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +KD + +P+ + Y +L+  +     +     +  E+    I+P       ++    +   
Sbjct: 562 MKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDL 621

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +T     F E+ E G  P+  T N ++ ++ +     K  ++ N +K  G      TYN 
Sbjct: 622 LTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNS 681

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  + +    E +  +L  ++ KG  P+  +FN +     + G +  A R++ +MKD  
Sbjct: 682 LMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFG 741

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN  +  +A+       + + K M +NE +PN NTY  LI  +C +   + A 
Sbjct: 742 LAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEAN 801

Query: 483 KYIREM 488
            +I  +
Sbjct: 802 SFISNL 807



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 175/388 (45%), Gaps = 4/388 (1%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S   Y+ +I+   +    D A      M  + ++  V T++ L+  + + G    A+
Sbjct: 357 FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAM 416

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
             F  M   GC P+   F+ +I +   +    E    F+ +K  +  PD++ +  L+  +
Sbjct: 417 KVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVF 476

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G  SE   VF+EMK AG  P   T++ +I A  RCG   +A  ++  ML+ G  P+ 
Sbjct: 477 GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDL 536

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+N ++    +    E+  +V  +MK   C+ + +TY  L+  +  +GK  + +  L  
Sbjct: 537 STYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA-NGKEVERMSALAE 595

Query: 383 MVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            +  G   P A     +    SK   +    R + ++++    P+  T N ++ ++   +
Sbjct: 596 EIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRR 655

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                 ++   ++++   P++ TY  L+ MY    H+  +   +RE+I  K +KP    +
Sbjct: 656 MVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREII-AKGMKPDIISF 714

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             V+    R G++++   +  +M D G 
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGL 742



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 171/396 (43%), Gaps = 39/396 (9%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++     L+G  K  + D A    + M+    +  + TF+ L++ +   G   E +  
Sbjct: 394 PDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKV 453

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  ++   C PD + ++ ++++  +    SE    F  +K   F P+   +  L+  + R
Sbjct: 454 FEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSR 513

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G   +A  ++R M  AG+ P++ TY+ V+ AL R G   ++  V AEM +  C+PN +T
Sbjct: 514 CGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELT 573

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+  +      E++  +  ++     E   +    L+  + K   L +  +    + 
Sbjct: 574 YCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR 633

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS---- 440
            +G +P+ +T N +     +   V+  + +   +KD    P+  TYN LM M++ +    
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFE 693

Query: 441 KSTDMVL-------------------------------KLKKEMEENEVEPNVNTYRILI 469
           KS D++                                ++  EM++  + P+V TY   I
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             Y     +  A   ++ MI+ +C KP  + Y  ++
Sbjct: 754 ASYASDSMFIEAIDVVKYMIKNEC-KPNQNTYNSLI 788



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 140/301 (46%), Gaps = 7/301 (2%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV   D ++ +I+   +   FD A      M    V   + T++ ++    R GL  
Sbjct: 494 RAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWE 553

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCR----KRRASEAQSFFDSLKDKFEPDVIVYT 256
           ++      M++  C P+++ +  ++         +R ++ A+  +  +    EP  ++  
Sbjct: 554 QSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGI---IEPQAVLLK 610

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            LV  + ++  ++E ER F E++  G  P++ T + ++    R   +++ +++   + + 
Sbjct: 611 TLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDS 670

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P+  T+N+LM ++ +    EK   +  ++   G + D I++N +I  +C++G++++A
Sbjct: 671 GFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEA 730

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            ++   M   G  P+  T+N      +       A  +   M   +C+PN  TYN L+  
Sbjct: 731 SRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDW 790

Query: 437 F 437
           F
Sbjct: 791 F 791



 Score = 42.0 bits (97), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 29/145 (20%), Positives = 66/145 (45%), Gaps = 3/145 (2%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S   Y+ ++ +  +   F+ +   +  + ++ ++  + +F+ ++  Y R G   EA 
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
             F  M+++G APD I ++  I+         EA      + K++ +P+   Y +L+  +
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWF 791

Query: 263 CRAGNISEAERVFREMKMAGIQPNV 287
           C+     EA      ++   + P+V
Sbjct: 792 CKLNRRDEANSFISNLR--NLDPSV 814


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 188/356 (52%), Gaps = 2/356 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+ R     V ++S ++  Y + G     +     M+  G  P+   ++ VI +LC+  +
Sbjct: 279 MELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 338

Query: 234 ASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            +EA+    + + +   PD ++YT L+ G+C+ GN+S A R+F EM+   I P+  TY+ 
Sbjct: 339 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTA 398

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VI  LC+ G++  A  +F EM+    EP+ +T+  L+  + K  + ++   ++NQM ++G
Sbjct: 399 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 458

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + +TY  L D  CK G+++ A ++L+ M RKG   N  T+N +   + K G+++ A 
Sbjct: 459 LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAV 518

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           ++   M+     P+ VTY  LM  +  S+      +L ++M + E++P V T+ +L+  +
Sbjct: 519 KLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGF 578

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  G   +  K ++ M+ EK + P ++ Y  +++Q      ++   E+   M  +G
Sbjct: 579 CMSGMLEDGEKLLKWML-EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 191/385 (49%), Gaps = 4/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +IN   +V +       I+ M+ + ++    T++ ++    + G  AEA   
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
              M   G APD + ++ +I   C+    S A   FD + K K  PD I YT ++ G C+
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 405

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA+++F EM    ++P+  TY+ +ID  C+ G++  A  +  +ML++G  PN +T
Sbjct: 406 TGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L     K    +   ++ ++M R G E +  TYN L++  CK G ++ A+K++  M 
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G +P+A T+  +     K  ++  AH +  +M D + +P  VT+N+LM  F  S   +
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              KL K M E  + PN  TY  LI  YC   +     +  R M   K + P  + Y ++
Sbjct: 586 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC-AKGVVPDGNTYNIL 644

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           ++   +A  +++   L   MV +GF
Sbjct: 645 IKGHCKARNMKEAWFLHRDMVGKGF 669



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 185/417 (44%), Gaps = 37/417 (8%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P  Y+ +I L  K  +   A   +  M S  +      ++ L+  + + G  + A   F
Sbjct: 322 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 381

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRA 265
           + M++   +PD I ++ VI  LC+  R  EA   F  +   + EPD + YT L+ G+C+ 
Sbjct: 382 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 441

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + EA  +  +M   G+ PN+ TY+ + D LC+CG++  A+++  EM   G E N  T+
Sbjct: 442 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 501

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD--------------- 370
           N+L+    KA   ++ +++   M+  G   D +TY  L+D +CK                
Sbjct: 502 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 561

Query: 371 --------------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                               G LED  K+L  M+ KG  PNA+T+N + +      ++  
Sbjct: 562 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 621

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              +Y  M      P+  TYNIL++    +++      L ++M        V++Y  LI 
Sbjct: 622 TTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIK 681

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            +     +  A +   +M  E  L     +Y +        G+++   EL ++ +++
Sbjct: 682 GFYKRKKFLEARELFEQMRREG-LVADREIYNIFADINYDEGKMELTLELCDEAIEK 737



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 187/429 (43%), Gaps = 40/429 (9%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMI--NLAGKVRQFDLAWHFI-DLMKSRNVEITVD--- 184
           VLSFF W   R +    P L    I   +A   +   +A   I D   + N+++ V    
Sbjct: 111 VLSFFEWACLRRD----PSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFGH 166

Query: 185 -----------------TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
                             F I  +  V AG+  EA   F++M  YG      + ++ IS 
Sbjct: 167 FVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISH 226

Query: 228 LCRKRRASEAQSFFDSLKDKFE-PDVIV------YTNLVRGWCRAGNISEAERVFREMKM 280
           L     + +      +LK   E P+V V      Y  +    C+ G + EA ++  +M++
Sbjct: 227 L-----SEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMEL 281

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P+V +YS VI+  C+ G++ R   +  EM   G +PN  T+N ++ +  K  +  +
Sbjct: 282 RGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAE 341

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
             +V  +M   G   D + Y  LID  CK G +  A ++ + M ++  +P+  T+  +  
Sbjct: 342 AERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVIC 401

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + G V  A +++ +M   + EP+ VTY  L+  +           L  +M +  + P
Sbjct: 402 GLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP 461

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           N+ TY  L    C  G  + A + + EM   K L+     Y  ++  L +AG + +  +L
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMC-RKGLELNIYTYNSLVNGLCKAGNIDQAVKL 520

Query: 521 VEKMVDRGF 529
           ++ M   GF
Sbjct: 521 MKDMEVAGF 529



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 39/343 (11%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
            G+V + D  +H    M  + +E    T++ L+  Y + G   EA    N+M + G  P+
Sbjct: 406 TGRVMEADKLFH---EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + ++ +   LC+      A      + +   E ++  Y +LV G C+AGNI +A ++ +
Sbjct: 463 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 522

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML---------------------- 314
           +M++AG  P+  TY+ ++DA C+  ++ RAH++  +ML                      
Sbjct: 523 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSG 582

Query: 315 -------------EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
                        E G  PN+ T+N+L++ +   +      ++Y  M   G   D  TYN
Sbjct: 583 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYN 642

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  HCK   +++A  +   MV KG N   S++N + +   K      A  ++ +M+  
Sbjct: 643 ILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRRE 702

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
               +   YNI   +       ++ L+L  E  E  +  ++ T
Sbjct: 703 GLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745



 Score = 42.4 bits (98), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 4/148 (2%)

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS-KSTDM 445
           G +P    F++ F+ + + G ++ A +++ KM +     +  + N+ +   +       +
Sbjct: 179 GSDPR--VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKI 236

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            LK+  E  E  V  N  +Y I+    C +G    A++ + +M    C+ P    Y  V+
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI-PDVISYSTVI 295

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFTARP 533
               + G+LQ+  +L+E+M  +G    P
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNP 323


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 180/372 (48%), Gaps = 2/372 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  + D A   +D M    V++    ++ L+  Y R    A        ME  G  P   
Sbjct: 145 KAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVG 204

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++I++  L      S+ +S FD +K K    DV  Y+ ++  +CRAGN+  A  VF E 
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC 264

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              GI+PN  TY  +I+  C+ GQI  A  +  +M   G   N I FN ++  + +    
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMV 324

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +K L++   M+R+G + D  TYN L    C+  ++EDA K+L+ M   G   N  ++  +
Sbjct: 325 DKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTL 384

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
               SK GD+  A R++  M+     P+ VTYN+++  +  S S     + KKEME+  +
Sbjct: 385 ISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGL 444

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+V TY  L+  +C  G  + A +   EM +++  KP    Y  ++  L + G+ ++  
Sbjct: 445 VPDVYTYAALVHGHCVNGKVDVALRLFEEM-KQRGAKPNVVAYTALISGLAKEGRSEEAF 503

Query: 519 ELVEKMVDRGFT 530
           +  + M+  G T
Sbjct: 504 QFYDNMLAAGLT 515



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 40/334 (11%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK-- 231
           M+S  VE TV T++ILV     AG  ++    F+ ++    A D   +S VI+  CR   
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 232 -RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM---------- 280
            RRASE   F + + +  EP+   Y  L+ G+C+ G I  AE +  +M++          
Sbjct: 254 VRRASEV--FDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIF 311

Query: 281 -------------------------AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
                                     GIQ +VYTY+ +   LCR  ++  A  +   M E
Sbjct: 312 NTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G E N +++  L+ +H K     +  +++  M+  G     +TYN +ID + K G + +
Sbjct: 372 NGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIRE 431

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A +    M +KG  P+  T+  +       G V+ A R++ +MK    +PN V Y  L+ 
Sbjct: 432 AERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALIS 491

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             A    ++   +    M    + P+   Y +L+
Sbjct: 492 GLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/310 (20%), Positives = 114/310 (36%), Gaps = 71/310 (22%)

Query: 291 SIVIDALCRCGQI-----------------------------------TRAHDVFAEMLE 315
           S+V+D  C+ G++                                    R  +V  EM  
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMES 196

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G EP   T+  L+     A    KV  V++++KR     D   Y+ +I+ +C+ G +  
Sbjct: 197 GGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRR 256

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A +V +  V  G  PN  T+  +     K+G +  A  +   M+      N + +N ++ 
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316

Query: 436 MFATSKSTDMVLKLKKEME-----------------------------------ENEVEP 460
            +      D  L++K  ME                                   EN VE 
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVES 376

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           N  +Y  LI+++   G    A +  R+M E K  +P    Y +++    ++G +++ E  
Sbjct: 377 NYVSYTTLISIHSKEGDMVEARRLFRDM-EGKGSRPSVVTYNVMIDGYIKSGSIREAERF 435

Query: 521 VEKMVDRGFT 530
            ++M  +G  
Sbjct: 436 KKEMEKKGLV 445


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 210/424 (49%), Gaps = 8/424 (1%)

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY--HEMINLAGKVRQFDLAWH 169
           VR ++ K+C  R+   L +V  F + +++    +    LY  + ++   GK      A +
Sbjct: 126 VRILMIKAC--RNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQN 183

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
               + S  V+ ++ TF+ ++    + G   EAV  FN++ ++   PD   ++ +I   C
Sbjct: 184 VYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHC 243

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R R+  +A   FD + KD   P+ + Y+ L+ G C  G I EA  +  EM   GI+P VY
Sbjct: 244 RNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVY 303

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY++ I +LC  G++  A ++   M + GC P+  T+  ++    +A + E  + +Y++M
Sbjct: 304 TYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKM 363

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            + G   +T+TYN LI+  C +G+   A+K+ + M   G   NA T+N I + +  + D+
Sbjct: 364 LKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDI 423

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A  ++ KM      P  VTYN L+         +   +    M+E+  EP+  TY  L
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           I+ +C  G  ++A  +  EM+  KC + P    Y  ++    + G++     L E+M + 
Sbjct: 484 ISGFCKGGKLDSATSFFYEML--KCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEEN 541

Query: 528 GFTA 531
           G +A
Sbjct: 542 GCSA 545



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 167/373 (44%), Gaps = 2/373 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      +   A   ++ M  + +E TV T+++ +      G   +A++    M 
Sbjct: 270 YSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMG 329

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC+P    ++ +IS L R  +   A   +   LK+   P+ + Y  L+   C  G   
Sbjct: 330 KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++F  M+  G   N  TY+ +I  L     I +A  VF +ML+ G  P  +T+N L+
Sbjct: 390 IALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             ++K        +    MK   CE D  TY  LI   CK GKL+ A      M++ G +
Sbjct: 450 VENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGIS 509

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+  +     K G ++ A  ++ +M++  C  +  TYN ++   +         K 
Sbjct: 510 PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M E  ++PN  TY  LI   C     N A+K   EM ++ CL P +  Y  ++  L 
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCL-PNAHTYTSLIYGLC 628

Query: 510 RAGQLQKHEELVE 522
           + G++   E L E
Sbjct: 629 QEGKVDAAERLTE 641



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 185/403 (45%), Gaps = 13/403 (3%)

Query: 94  LSLGFSQISTAHSISPSTVRH--VIEKSCG-VRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           L++G         + P+TV +  +I + C   R GI     L  F+W+       ++   
Sbjct: 355 LAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGI----ALKIFDWMEGHGTLANA-QT 409

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+++I     +   + A    + M       TV T++ L+   ++ G    A      M+
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMK 469

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E  C PD+  +  +IS  C+  +   A SFF + LK    P+   YT ++ G+C+ G I 
Sbjct: 470 ESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKID 529

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  M+  G   ++ TY+ +I  L +  + + A    A+M E G +PN+IT+ +L+
Sbjct: 530 VALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLI 589

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K + T    +++++M++  C  +  TY  LI   C++GK++ A +    +   GC 
Sbjct: 590 NGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER----LTENGCE 645

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T++ +   + + G  N A ++   MK+    P+   Y  L+     S   D  L++
Sbjct: 646 PTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEI 705

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
              M     +P++  Y++LI   CG+     A    + +++++
Sbjct: 706 FNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQ 748



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 151/319 (47%), Gaps = 5/319 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y E+I+   K  + D A  F   M    +     T++ ++  Y + G    A+  F RME
Sbjct: 480 YCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME 539

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC+     ++ +IS L +  R SEA+ F   + ++  +P+ I YT+L+ G C+    +
Sbjct: 540 ENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATN 599

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++F EM+     PN +TY+ +I  LC+ G++    D    + E GCEP   T++ L+
Sbjct: 600 LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV----DAAERLTENGCEPTIDTYSTLV 655

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  R+ +  Q+   MK  G       Y  L+  HCK  K++ A+++ N M  KG  
Sbjct: 656 SGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQ 715

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   + ++   +  +     A  ++  +   +   + + + +L+        +D+ +K 
Sbjct: 716 PHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKF 775

Query: 450 KKEMEENEVEPNVNTYRIL 468
              ME     P+++TY IL
Sbjct: 776 LYLMESRNCTPSLHTYIIL 794



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 133/275 (48%), Gaps = 3/275 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S + Y+ +I+   K  +F  A  F   M  + ++    T++ L+    +      A   F
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIF 605

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
           + ME+  C P+   ++ +I  LC++ +   A+   +   +  EP +  Y+ LV G CR G
Sbjct: 606 HEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE---NGCEPTIDTYSTLVSGLCREG 662

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
             +EA ++   MK  G+ P++  Y  ++ A C+  ++  A ++F  M   G +P+   + 
Sbjct: 663 RSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYK 722

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+      SR E+ L ++  + +    +D I +  L+D   ++G  +  +K L  M  +
Sbjct: 723 VLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            C P+  T+ ++ R +SK+G   G  ++  +++++
Sbjct: 783 NCTPSLHTYIILARELSKVGKSIGTDQIGNRLREV 817


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 176/348 (50%), Gaps = 2/348 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            ++ L+  + + G    A   F+ M     +PD I ++ +I    +  +  E Q+ F  +
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +  +PD + YT L+  +C+AG +  A  +  EM   G+ PN+ TY  +ID LC+ G++
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A+++  EM + G + N   +N+++    KA   E+ +++  +M+  G + D ITY  +
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +C+ G ++ A K+L  M+ +G  P   TFN++      LG +    R+ G M +   
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ +TYN LM+      S +   K+ K M    V P+ NTY ILI  +C   +   A+ 
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             +EMI EK   P  + Y  ++++  +  ++ +  EL E+M   G  A
Sbjct: 665 LYKEMI-EKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVA 711



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 175/347 (50%), Gaps = 2/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++I++    R G   EA     +M+     PD +++S VI   C      +A    D +
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + K  +P+   Y +++   C+ G   EAE+V REM    I P+   Y+ +I    + G +
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A+  F EML     P+ IT+  L++   +  +  +   ++++M   G + D +TY  L
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +CK G++ +A  + N MV+ G  PN  T+  +   + K G+++ A+ +  +M+    
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           + N   YN ++     + + +  +KL KEME   ++P+  TY  +I  YC +G  + A+K
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            ++EM+ ++ L+P    + +++      G L+  + L+  M+++G  
Sbjct: 560 LLQEML-DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 156/322 (48%), Gaps = 2/322 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M SR ++    T++ L+  Y +AG    A    N M + G  P+ + +  +I  LC+   
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A    D ++ K  + +V +Y ++V G C+AGNI +A ++ +EM++AGI P+  TY+ 
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VIDA CR G I +AH +  EML+ G +P  +TFN LM         E   ++   M   G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D ITYN L+  HC    +    K+   M  +G  P+++T+N++ +   K  ++  A 
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +Y +M +    P   +YN L++ F   K      +L +EM  + +  +   Y   + M 
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMC 723

Query: 473 CGMGHWNNAYKYIREMIEEKCL 494
              G          E I EKCL
Sbjct: 724 YEEGDVEITLNLCDEAI-EKCL 744



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 165/332 (49%), Gaps = 5/332 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+ V    L H    L G VR    A  + D M S+ +     T++ L++ + + G   E
Sbjct: 361 PDNVVYTTLIHGFFKL-GHVRT---ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
             + F+ M   G  PD++ ++ +I + C+      A S  + + +    P+++ Y  L+ 
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C+ G +  A  +  EM+  G+Q NV  Y+ +++ +C+ G I +A  +  EM   G +P
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           ++IT+  ++  + +    +K  ++  +M   G +   +T+N L++  C  G LED  ++L
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ KG  P+A T+N + +       +N   ++Y +M++    P++ TYNIL++    +
Sbjct: 597 GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           ++      L KEM E    P V +Y  LI  +
Sbjct: 657 RNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 179/407 (43%), Gaps = 34/407 (8%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHE--MINLAGKVRQFDLAWHFI-DLMKSRNVEITVDTFS 187
           VL+FF+W   R E    P L     +I++A       LA   + D   +  +EI V    
Sbjct: 119 VLAFFDWARVRRE----PSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVK--- 171

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
                        +  H      +Y   P+ IAF I   +L      SEA+   D L   
Sbjct: 172 -----------MTQFTHRLIYTYKYW-GPNPIAFDIFFQVLVEIGHLSEARKLLDKL--- 216

Query: 248 FEPDVIVYTNLVRGWC-RAGNISE----AERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
               ++V  +    +  R  N SE    A +VF E    GI  N  +Y+I+I +LCR G+
Sbjct: 217 LSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGK 273

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  AH +  +M      P+ ++++ ++  +      +K L++ + M+  G + +  TYN 
Sbjct: 274 VKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNS 333

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           +I   CK GK  +A KVL  M+ +   P+   +  +     KLG V  A++ + +M   K
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TY  L+Q F           L  EM    ++P+  TY  LI +YC  G   NA+
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               EM++   + P    Y  ++  L + G+L    EL+++M  +G 
Sbjct: 454 SLHNEMVQMG-MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 204/428 (47%), Gaps = 27/428 (6%)

Query: 124 HGIPLLQVLSFFNWVTA----RPE-FVHSPDLYHEMINLAGKVR---------------- 162
           HG+PL  V+   NWV       P  F H+ + +  M   AG VR                
Sbjct: 137 HGLPL--VVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCRE 194

Query: 163 -QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
            +F+ A   +  M ++   +   T +++VR + R G        F RM E G  P+ + +
Sbjct: 195 GRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNY 254

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM-K 279
           S  I  LC +    +A    + +  K  +P+V  +T+L+ G C+ G +  A R+F ++ K
Sbjct: 255 SAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVK 314

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
            +  +PNV+TY+++I   C+ G++ RA  +   M+E G  PN+ T+  L+  H K    +
Sbjct: 315 SSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFD 374

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           +  ++ N+MK  G   +  TYN +I   CK GK+++A KVL     +G + +  T+ ++ 
Sbjct: 375 RAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILI 434

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
               K G +  A  ++ +M +  C P+  TY  ++ M+   +  +   +L  +     + 
Sbjct: 435 TEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLV 494

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P   TY  +I  YC +G   +A K    M++  CL P S  Y  ++  L +  +L++   
Sbjct: 495 PTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCL-PDSITYGALISSLCKESRLEEARA 553

Query: 520 LVEKMVDR 527
           L E M+D+
Sbjct: 554 LFETMLDK 561



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/373 (20%), Positives = 165/373 (44%), Gaps = 9/373 (2%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYGCAPD 217
           G V+Q   A+H ++ M  + ++  V T + L+    + G    A   F ++ +     P+
Sbjct: 265 GYVKQ---AFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPN 321

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
              ++++I   C++ + + A+     + ++   P+   YT L+ G C+ G+   A  +  
Sbjct: 322 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMN 381

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           +MK+ G  PN+YTY+ +I   C+ G+I  A+ V       G   + +T+  L+  H K  
Sbjct: 382 KMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQG 441

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
                L ++ QM    C  D  TY  +I  +C+  ++E + ++ +  +  G  P   T+ 
Sbjct: 442 HITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYT 501

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +     +LG +  A +++ +M    C P+++TY  L+         +    L + M + 
Sbjct: 502 SMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDK 561

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P   T   L   YC       A  ++  + + +     +   + ++++L   G L  
Sbjct: 562 HLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ----QAHTADALVRKLSTVGNLDA 617

Query: 517 HEELVEKMVDRGF 529
               ++ ++D+ +
Sbjct: 618 ASLFLKNVLDKHY 630



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 106/232 (45%), Gaps = 3/232 (1%)

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT-EKVLQVYNQMKRL--GCEADT 357
           G++  A D+  E+   G      T N ++RV ++         + ++ M R   G   D 
Sbjct: 122 GRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDH 181

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            ++  L+   C++G+ E+A  +L +M  +G   +++T  ++ R   + G       ++ +
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M ++   PN V Y+  +              + +EM    ++PNV T+  LI   C +G 
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              A++   ++++    KP    Y +++    + G+L + E L+ +MV++G 
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 353


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 223/472 (47%), Gaps = 20/472 (4%)

Query: 54  PEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVR 113
           P+ TL    FHS    H R NP  +S    ++    T+  +  G   IS+   I   T+ 
Sbjct: 17  PKPTL----FHSY---HSRTNPIATSIEVSTIIE--TLDPMEDGLKVISS--RIRSYTIT 65

Query: 114 HVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDL 173
            V+++    R G  L      F W + +   +    +   +I    K   F+L W  +  
Sbjct: 66  SVLQEQPDTRLGFRL------FIW-SLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQE 118

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           +K+  ++I+ + FS+L+  Y  AG+  +AV +F+ M ++ C PD  AF++++  L RK  
Sbjct: 119 LKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEA 178

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A + ++  LK    PDV+ Y  L+ G C+     +A  +F EM   GI PN   YSI
Sbjct: 179 FLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSI 238

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           V+  LC+  +I  A  +F++M   GC  + IT+N L+    K+   +    +   + + G
Sbjct: 239 VLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG 298

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                I Y  LI+   +  + E+A      M+R+   P+   + ++ R +S+ G V  A 
Sbjct: 299 HILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEAL 358

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            + G+M +    P+T+ YN L++ F      D    L+ E+ +++  PN +TY ILI   
Sbjct: 359 TLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM 418

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           C  G  N A    +EM +  CL P    +  ++  L +A +L++   L  +M
Sbjct: 419 CKNGLINKAQHIFKEMEKLGCL-PSVVTFNSLINGLCKANRLEEARLLFYQM 469



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 170/337 (50%), Gaps = 14/337 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   K    D A+  + L+      + V  +  L+    RA    EA   + +M 
Sbjct: 271 YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKML 330

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
                PD + ++I+I  L ++ R +EA +    + ++   PD I Y  L++G+C  G + 
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE +  E+      PN +TYSI+I  +C+ G I +A  +F EM ++GC P+ +TFN+L+
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 330 RVHVKASRTEKVLQVYNQMK---------RLGCEADTI----TYNFLIDCHCKDGKLEDA 376
               KA+R E+   ++ QM+         RL    D +    +   +++  C+ G +  A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            K+L  +V  G  P+  T+N++     K G++NGA +++ +M+     P++VTY  L+  
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
              +   +  L++ ++M +    P  +TY+ ++T  C
Sbjct: 571 LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC 607



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 171/346 (49%), Gaps = 15/346 (4%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M++      + T+++L+  + ++G   +A      + + G     I +  +I+ L R RR
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  ++   L++  +PDV++YT ++RG  + G ++EA  +  EM   G++P+   Y+ 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I   C  G +  A  +  E+ +  C PN+ T++ L+    K     K   ++ +M++LG
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSM--VRK---------GCNP--NASTFNMIF 399
           C    +T+N LI+  CK  +LE+A  +   M  VRK         G +   + ++  ++ 
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMM 498

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + + G +  A+++  ++ D    P+  TYNIL+  F    + +   KL KEM+     
Sbjct: 499 ERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHM 558

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
           P+  TY  LI      G   +A +   +M+++ C+ P SS Y+ ++
Sbjct: 559 PDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCV-PESSTYKTIM 603



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 14/215 (6%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+SIL+    + GL  +A H F  ME+ GC P  + F+ +I+ LC+  R  EA+  F  +
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 245 KDKFEP--------------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           +   +P              D+     ++   C +G I +A ++  ++  +G+ P++ TY
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I+I+  C+ G I  A  +F EM   G  P+S+T+  L+    +A R E  L+++ QM +
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK 589

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
            GC  ++ TY  ++   C++  +  A+ V    +R
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLALSVWMKYLR 624


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 183/376 (48%), Gaps = 2/376 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+N   K  + D    F+  M+ + +   + T++ L+  Y R GL  EA    N M   G
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P    ++ VI+ LC+K R   A+  F+  L     PD   Y  L+   CR  N  EA+
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F +M   G+ P++ ++S +I    R G + +A   F +M   G  P+++ +  L+  +
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +     + L++ ++M   GC  D + YN +++  CK   L DA  + + MV +G  P+ 
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  +     K G++  A  ++G M     +P+ VTYNIL+  F  +   +   +L  E
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M   ++ PN  +Y IL+  YC +G  + A++   EMI  K +KP       V++   R+G
Sbjct: 491 MISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMI-RKGIKPTLVTCNTVIKGYCRSG 549

Query: 513 QLQKHEELVEKMVDRG 528
            L K +E + KM+  G
Sbjct: 550 DLSKADEFLGKMISEG 565



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 186/347 (53%), Gaps = 3/347 (0%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPDL  +  +I ++ +    D A  +   MK+  +      ++IL+  Y R G+ +EA+ 
Sbjct: 322 SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALE 381

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             ++M E GCA D +A++ +++ LC+K+  ++A + FD + ++   PD   +T L+ G C
Sbjct: 382 IRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHC 441

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + GN+ +A  +F  M    I+P++ TY+I+ID  C+  ++ +A++++ EM+     PN I
Sbjct: 442 KEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHI 501

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++  L+  +       +  +++++M R G +   +T N +I  +C+ G L  A + L  M
Sbjct: 502 SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + +G  P++ T+N +     K   ++ A  +  KM+    +P+ VTYN+++  F      
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRM 621

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
                + ++M E  ++P+ +TY  LI  Y    +   A+++  EM++
Sbjct: 622 QEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQ 668



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 178/358 (49%), Gaps = 2/358 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R V   + +FS L+    R G   +A+  F  M+  G  PD + ++I+I+  CR   
Sbjct: 316 MLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGM 375

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            SEA    D  L+     DV+ Y  ++ G C+   +++A  +F EM   G+ P+  T++ 
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I   C+ G + +A  +F  M +   +P+ +T+N L+    K +  EK  +++N+M    
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + I+Y  L++ +C  G + +A ++ + M+RKG  P   T N + +   + GD++ A 
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
              GKM      P+++TYN L+  F   +  D    L  +ME   ++P+V TY +++  +
Sbjct: 556 EFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGF 615

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           C  G    A   +R+MI E+ + P  S Y  ++        L++     ++M+ RGF 
Sbjct: 616 CRQGRMQEAELILRKMI-ERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFV 672



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 139/278 (50%), Gaps = 1/278 (0%)

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D +V+  L+R + +A  ++E    F+ ++  G   ++   + ++  L + G +  A +V+
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            E+   G E N  T N ++    K  + + V      M++ G  AD +TYN LI+ +C++
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G L +A +V+NSM  KG  P   T+N +   + K G    A  ++ +M  +   P+T TY
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           N L+     + +      +  +M    V P++ ++  LI +    GH + A  Y R+M +
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM-K 352

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              L P + +Y +++    R G + +  E+ +KM+++G
Sbjct: 353 TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 160/379 (42%), Gaps = 37/379 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            F +L+R YV+A    E    F  +   G      A + ++  L +      A   ++ +
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +   E +V     +V   C+   I + +    +M+  GI  ++ TY+ +I+A CR G +
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A +V   M   G +P   T+N ++    K  R  +   V+N+M  +G   DT TYN L
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +   C++    +A  + + M+ +G +P+  +F+ +    S+ G ++ A   +  MK    
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356

Query: 424 EPNTVTYNILM-----------------QMFATSKSTDMVL------------------K 448
            P+ V Y IL+                 +M     + D+V                    
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L  EM E  V P+  T+  LI  +C  G+   A   +  ++ +K +KP    Y +++   
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALS-LFGIMTQKNIKPDIVTYNILIDGF 475

Query: 509 RRAGQLQKHEELVEKMVDR 527
            +  +++K  EL  +M+ R
Sbjct: 476 CKTTEMEKANELWNEMISR 494


>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Brachypodium distachyon]
          Length = 501

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 197/398 (49%), Gaps = 13/398 (3%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L  F W  +   + H+      MI+L GK+RQ D  W  +  M  R + +TV+  +  +R
Sbjct: 101 LGLFQWAQSSGNYKHTAYACSRMIDLLGKMRQIDQMWDLLSDMHCRGL-VTVEAAATSIR 159

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           R   A    +AV  F+++ + G   +    ++++  LC++++   A+  F  L    +PD
Sbjct: 160 RLAGARRWKDAVLLFDKLGDMGLERNTETMNVLLDALCKEKKVEVARKVFLVLSPHIQPD 219

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              +   V GWC A  I EA     EMK  G  P+V TY+ V++A C+       +++  
Sbjct: 220 AYTFNIFVHGWCSARRIDEAMWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEILD 279

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
            M   GC PN IT+  +M    K    E+ L V ++MK  GC+ DT+ YN LI+   K G
Sbjct: 280 SMSSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKAG 339

Query: 372 KLEDAIKVLN-SMVRKGCNPNASTFNMIFR--CISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            L +A +V    M   G   + +T+N +    C   L +   A  +  +M+   C+P+  
Sbjct: 340 HLSEASQVFQVEMPMNGVPRSLATYNTMISVFCYKDLDE--DALSVLKEMETQSCKPDLQ 397

Query: 429 TYNILMQMFATSKSTDMVLK--LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           TY  L+++F + +  D  ++  L + M ++ +  +++TY +LI   C +G  + AY+   
Sbjct: 398 TYRPLLRLFLSRRGQDDTVRNLLNELMNKHSLGLDLDTYTLLIHGLCRVGETDWAYRLFD 457

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           EM+  + + P     E++L + +R    +K EE VE++
Sbjct: 458 EMVGSE-IVPRYRTCELLLSEAQR----KKMEEWVERI 490



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 147/310 (47%), Gaps = 4/310 (1%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           A S +I +L + R+  +       +  +    V      +R    A    +A  +F ++ 
Sbjct: 119 ACSRMIDLLGKMRQIDQMWDLLSDMHCRGLVTVEAAATSIRRLAGARRWKDAVLLFDKLG 178

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G++ N  T ++++DALC+  ++  A  VF  +L    +P++ TFN  +     A R +
Sbjct: 179 DMGLERNTETMNVLLDALCKEKKVEVARKVFL-VLSPHIQPDAYTFNIFVHGWCSARRID 237

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           + +    +MK  G     ITY  +++ +CK        ++L+SM  +GC+PN  T+ MI 
Sbjct: 238 EAMWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTMIM 297

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS-TDMVLKLKKEMEENEV 458
             ++K      A  +  +MK   C+P+T+ YN L+ +   +   ++     + EM  N V
Sbjct: 298 TSLAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGV 357

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ-LRRAGQLQKH 517
             ++ TY  +I+++C      +A   ++EM  + C KP    Y  +L+  L R GQ    
Sbjct: 358 PRSLATYNTMISVFCYKDLDEDALSVLKEMETQSC-KPDLQTYRPLLRLFLSRRGQDDTV 416

Query: 518 EELVEKMVDR 527
             L+ +++++
Sbjct: 417 RNLLNELMNK 426



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 39/242 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K   F + +  +D M S      V T+++++    +  +  EA+   +RM+
Sbjct: 258 YTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMK 317

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNLVRGWCRAGNI 268
             GC PD + ++ +I++L +    SEA   F  +   +     +  Y  ++  +C     
Sbjct: 318 SSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGVPRSLATYNTMISVFCYKDLD 377

Query: 269 SEAERVFREMKMAGIQPNVYTY-------------------------------------S 291
            +A  V +EM+    +P++ TY                                     +
Sbjct: 378 EDALSVLKEMETQSCKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELMNKHSLGLDLDTYT 437

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           ++I  LCR G+   A+ +F EM+     P   T   L+    +    E V ++ N M R 
Sbjct: 438 LLIHGLCRVGETDWAYRLFDEMVGSEIVPRYRTCELLLSEAQRKKMEEWVERIQNYMTRF 497

Query: 352 GC 353
            C
Sbjct: 498 LC 499


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 197/390 (50%), Gaps = 6/390 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ +I    +  + D A+  +D MK++     + T++IL+      G+   A+  
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
            N++ +  C P  + ++I+I     +    EA    D  L+   +PD+  Y +++RG CR
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A ++   +   G  P+V TY+I++  L   G+    +++ ++M+  GCE N +T
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    +  + E+ + +   MK+ G + D   Y+ LI   CK+G+++ AI+VL+ M+
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+   +N I  C+ K    + A  ++ K+ ++ C PN  +YN +     ++    
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM-IEEKCLKPGSSVYEM 503
             L +  EM +  V+P+  TY  LI+  C  G  + A + + +M +E    KP    Y +
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           VL  L +  ++    E++  MVD+G   RP
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKG--CRP 511



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 187/385 (48%), Gaps = 6/385 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +I         D A  F + +   N + TV T++IL+   +  G   EA+ 
Sbjct: 158 SPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMK 217

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M E    PD   ++ +I  +CR+     A     S+  K + PDVI Y  L+RG  
Sbjct: 218 LLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLL 277

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G       +  +M   G + NV TYS++I ++CR G++     +  +M + G +P+  
Sbjct: 278 NQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGY 337

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            ++ L+    K  R +  ++V + M   GC  D + YN ++ C CK  + ++A+ +   +
Sbjct: 338 CYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL 397

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC+PNAS++N +F  +   G    A  M  +M D   +P+ +TYN L+         
Sbjct: 398 GEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMV 457

Query: 444 DMVLKL--KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
           D  ++L    EME +E +P+V +Y I++   C +   ++A + +  M+++ C +P  + Y
Sbjct: 458 DEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGC-RPNETTY 516

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVD 526
             +++ +   G L    +L   +V+
Sbjct: 517 TFLIEGIGFGGCLNDARDLATTLVN 541



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 166/339 (48%), Gaps = 1/339 (0%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           + R  +AG   E+++    +   G  PD +  + +I  L   +   +A      L++   
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH 123

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD+I Y  ++ G+CRA  I  A +V   MK  G  P++ TY+I+I +LC  G +  A + 
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             ++L+  C+P  +T+  L+   +     ++ +++ ++M  +  + D  TYN +I   C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +G ++ A ++++S+  KG  P+  T+N++ R +   G     + +   M    CE N VT
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y++L+         +  + L K+M++  ++P+   Y  LI   C  G  + A + +  MI
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + C+ P    Y  +L  L +  +  +   + EK+ + G
Sbjct: 364 SDGCV-PDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 5/285 (1%)

Query: 135 FNWVTARPEFVHSPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F  +++     ++PD+    I L G + Q  ++  +  +  M +R  E  V T+S+L+  
Sbjct: 251 FQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISS 310

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPD 251
             R G   E V     M++ G  PD   +  +I+ LC++ R   A    D +  D   PD
Sbjct: 311 VCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPD 370

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           ++ Y  ++   C+     EA  +F ++   G  PN  +Y+ +  AL   G   RA  +  
Sbjct: 371 IVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMIL 430

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ--VYNQMKRLGCEADTITYNFLIDCHCK 369
           EML+ G +P+ IT+N+L+    +    ++ ++  V  +M+   C+   ++YN ++   CK
Sbjct: 431 EMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCK 490

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
             ++ DAI+VL +MV KGC PN +T+  +   I   G +N A  +
Sbjct: 491 VSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 80/157 (50%), Gaps = 2/157 (1%)

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           ++ AI+V++ +   G +P+   +N I     +   ++ A+++  +MK+    P+ VTYNI
Sbjct: 108 IDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNI 166

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+    +    D  L+ K ++ +   +P V TY ILI      G  + A K + EM+E  
Sbjct: 167 LIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN 226

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            L+P    Y  +++ + R G + +  +++  +  +G+
Sbjct: 227 -LQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGY 262


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 198/375 (52%), Gaps = 5/375 (1%)

Query: 155 INLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           I L GK+++   A HF D + +    +   ++  L+    + G    A+    ++E    
Sbjct: 139 ICLNGKLKE---ALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLV 195

Query: 215 APDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAER 273
             D + ++I+I+ LC+ +  S+A Q + + +  +  PDV+ + +L+ G+C  G + EA  
Sbjct: 196 NTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFG 255

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +F EM +  I P+VYT+SI++DALC+ G ITRA ++ A M++ G  P+ +T+++LM  + 
Sbjct: 256 LFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYC 315

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
             +   K   V++ M RLG      +YN +I+   K   +++A+ +   M  KG  P+  
Sbjct: 316 LVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTV 375

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T+N +   + KLG ++ A ++  +M +     + +TYN L+ +   +   D  + L K++
Sbjct: 376 TYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKI 435

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           ++  ++P++ TY ILI   C  G   NA    ++++  K     +  Y +++  L + G 
Sbjct: 436 KDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL-IKGYSVNAWTYNIMINGLCKEGL 494

Query: 514 LQKHEELVEKMVDRG 528
             + E L+ KM + G
Sbjct: 495 FNEAEVLLSKMENNG 509



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 186/393 (47%), Gaps = 35/393 (8%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           ++ + +  T+ TF+ILV  Y   G    A   F ++ + G  P  I F+ +I+ +C   +
Sbjct: 85  LELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGK 144

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA  F D  +   F  D + Y  L+ G C+ G    A ++ ++++   +  +V  Y+I
Sbjct: 145 LKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNI 204

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I++LC+   ++ A+ +++EM+     P+ +TFN+L+       + ++   ++++M    
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D  T++ L+D  CKDG +  A  +L  M+++G  P+  T++ +      + +VN A 
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  M  L   P+  +YNI++      K  D  L L KEM    + P+  TY  LI   
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGL 384

Query: 473 CGMGHWNNAYKYIREM----------------------------------IEEKCLKPGS 498
           C +G  + A++ + EM                                  I+++ ++P  
Sbjct: 385 CKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM 444

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             Y +++  L + G+L+  +++ + ++ +G++ 
Sbjct: 445 YTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSV 477



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 180/390 (46%), Gaps = 5/390 (1%)

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
           I+    +   + R +I   C +      LQ+L          + V    +Y+ +IN   K
Sbjct: 156 IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVV----MYNIIINSLCK 211

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
            +    A+     M ++ +   V TF+ L+  +   G   EA   F+ M      PD   
Sbjct: 212 DKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYT 271

Query: 221 FSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           FSI++  LC+    + A++     +K    PDV+ Y++L+ G+C    +++A+ VF  M 
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G+ P+ ++Y+I+I+ L +   +  A  +F EM   G  P+++T+N+L+    K  R  
Sbjct: 332 RLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRIS 391

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
              Q+ ++M   G  AD +TYN LID  CK+  ++ AI ++  +  +G  P+  T+N++ 
Sbjct: 392 YAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILI 451

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + K G +  A  ++  +       N  TYNI++         +    L  +ME N + 
Sbjct: 452 DGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGII 511

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           P+  TY  +I           A K +REMI
Sbjct: 512 PDAVTYETIIRALFRKDENEKAEKLLREMI 541



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 144/296 (48%), Gaps = 3/296 (1%)

Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN--ISEAERVFREMKMAGIQPNVYTYSI 292
           ++  SF   L+ +  P ++ +  ++    +A N   + A  +  ++++ GI P + T++I
Sbjct: 40  NDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNI 99

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++  C  G++T A  +FA++L++G  P +ITFN L+       + ++ L  ++ +  LG
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D ++Y  LI+  CK G+   A+++L  +  K  N +   +N+I   + K   V+ A+
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           ++Y +M   +  P+ VT+N L+  F           L  EM    + P+V T+ IL+   
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  G+   A   +  M+++  + P    Y  ++       ++ K + +   M   G
Sbjct: 280 CKDGNITRAKNMLAVMMKQGVI-PDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 3/243 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +++    V + + A H    M    V     +++I++    +  +  EA+  
Sbjct: 302 PDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSL 361

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCR 264
           F  M   G APD + ++ +I  LC+  R S A    D + +   P D++ Y +L+   C+
Sbjct: 362 FKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCK 421

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             +I +A  + +++K  GIQP++YTY+I+ID LC+ G++  A DVF ++L  G   N+ T
Sbjct: 422 NHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWT 481

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    K     +   + ++M+  G   D +TY  +I    +  + E A K+L  M+
Sbjct: 482 YNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMI 541

Query: 385 RKG 387
            +G
Sbjct: 542 IRG 544



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 67/134 (50%), Gaps = 1/134 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I++  K    D A   +  +K + ++ ++ T++IL+    + G    A   F  + 
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G + +   ++I+I+ LC++   +EA+     +++    PD + Y  ++R   R     
Sbjct: 472 IKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENE 531

Query: 270 EAERVFREMKMAGI 283
           +AE++ REM + G+
Sbjct: 532 KAEKLLREMIIRGL 545


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 190/371 (51%), Gaps = 5/371 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRMEEYGCAPDKIAF 221
           + DL +  +  +  +   +    F+ L++        ++A+     RM + GC P+  ++
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLVRGWCRAGNISEAERVFREM 278
           +I++  LC + R+ EA      + D      PDV+ YT ++ G+ + G++ +A   + EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              GI PNV TYS +I ALC+   + +A +V   M++ G  PN  T+N+++  +  + + 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           ++ +    +M   G E D +TYN L+D  CK+G+  +A K+ +SM ++G  P  +T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
            +  +  G +   H +   M      PN   ++IL+  +A     D  + +  +M +  +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+  TY  +I + C  G   +A +Y  +MI+E+ L PG+ VY  ++  L    +  K +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER-LSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 519 ELVEKMVDRGF 529
           EL+ +M+DRG 
Sbjct: 465 ELILEMLDRGI 475



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 178/379 (46%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K +  D A   +  M    V     T++ +V  Y  +G   EA+    +M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + ++ ++  LC+  R +EA+  FDS+ K   +P++  Y  L++G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E   +   M   GI PN Y +SI+I A  + G++ +A  VF++M + G  P+++T+  ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            +  K+ R E  ++ + QM         I YN LI   C   K + A +++  M+ +G  
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   FN I     K G V  + +++  M  +  +P+ +TY+ L+  +  +   D   KL
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    ++P+  TY  LI  YC +    +A    REM E   + P    Y ++LQ L 
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLF 595

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  +    +EL   + + G
Sbjct: 596 QTRRTAAAKELYVGITESG 614



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 188/388 (48%), Gaps = 10/388 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R ++  + T+  L++ Y   G   E    
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P+   FSI+I    ++ +  +A   F  ++ +   PD + Y  ++   C+
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + +A R F +M    + P    Y+ +I +LC   +  +A ++  EML+ G   ++I 
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+++  H K  R  +  ++++ M R+G + D ITY+ LID +C  GK+++A K+L SMV
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+N +     K+  +  A  ++ +M+     P+ +TYNI++Q    ++ T 
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVY 501
              +L   + E+  +  ++TY I++   C     NN       M +  C   L+  +  +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCK----NNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++  L + G+  + ++L   +   G 
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGL 685



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 166/380 (43%), Gaps = 40/380 (10%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      FSIL+  Y + G   +A+  F++M + G  PD + +  VI ILC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 230 RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRG------W-------------------- 262
           +  R  +A  +F+ + D +  P  IVY +L+        W                    
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 263 ---------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                    C+ G + E+E++F  M   G++P++ TYS +ID  C  G++  A  + A M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + VG +P+ +T+N L+  + K SR E  L ++ +M+  G   D ITYN ++    +  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK--MKDLKCEPNTVTYN 431
             A ++   +   G     ST+N+I   + K    + A RM+    + DL+ E  T T+N
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE--TRTFN 658

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           I++         D    L   +  N + P+V TY ++       G           M E 
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718

Query: 492 KCLKPGSSVYEMVLQQLRRA 511
            C      +  +V + L+R 
Sbjct: 719 GCTANSRMLNSIVRKLLQRG 738



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++ ++  + + G   +A   ++ M + G  P+ + +S +I+ LC+ +   +A     
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           S+ K+   P+   Y ++V G+C +G   EA    ++M   G++P+V TY+ ++D LC+ G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G +P   T+  L++ +       ++  + + M R G   +   ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K GK++ A+ V + M ++G NP+  T+  +   + K G V  A R + +M D 
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P  + YN L+         D   +L  EM +  +  +   +  +I  +C  G    +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            K    M+    +KP    Y  ++     AG++ +  +L+  MV  G 
Sbjct: 499 EKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 148/314 (47%), Gaps = 3/314 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M + G   D I F+ +I   C++ R  E++  FD + +   +PD+I Y+ L+ G+C AG 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++   M   G++P+  TY+ +I+  C+  ++  A  +F EM   G  P+ IT+N 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++   +  RT    ++Y  +   G + +  TYN ++   CK+   ++A+++  ++    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                 TFN++   + K+G  + A  ++  +      P+  TY+++ +        + + 
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L   MEEN    N      ++      G    A  Y+  MI+EK     +S   + L  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDL 768

Query: 508 LRRAGQLQKHEELV 521
           L   G+ Q++   +
Sbjct: 769 L-SGGKYQEYHSCI 781



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 7/302 (2%)

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG---IQPNVYTY 290
           A +A+  FD L  +     I   N         + + A   +  M  AG   + PN+ TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I+I + C  G++         +++ G   ++I F  L++      RT   +  V  +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRCISKLGD 407
           +LGC  +  +YN L+   C + + ++A+++L  M   G  C P+  ++  +     K GD
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A+  Y +M D    PN VTY+ ++     +++ D  +++   M +N V PN  TY  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++  YC  G    A  ++++M  +  ++P    Y  ++  L + G+  +  ++ + M  R
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 528 GF 529
           G 
Sbjct: 334 GL 335


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 186/377 (49%), Gaps = 2/377 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K   +  A   +D M+++  E  + T+++L+      G   EA++  + + 
Sbjct: 200 YSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLP 259

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            +GC PD + ++ V+  LC   R  E +  F  +  +K  PD + +  +V   C+ G + 
Sbjct: 260 SHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVD 319

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +V   M   G  P++ TYS ++D LC  G++  A ++ + +   GC+P++I +  ++
Sbjct: 320 RAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVL 379

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +      + E   ++  +M    C  D +T+N +I   C+ G ++ AIKV+  M   GCN
Sbjct: 380 KGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCN 439

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N I   +     ++ A  +   ++   C+P+ VT+N L++   +    +   +L
Sbjct: 440 PDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL 499

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M  ++  P+  T+  +IT  C  G    A + ++ M E  C+ P  S Y +V+  L 
Sbjct: 500 MVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCI-PNQSTYNIVVDALL 558

Query: 510 RAGQLQKHEELVEKMVD 526
           +AG+ Q+  +L+  M +
Sbjct: 559 KAGKTQEALKLLSGMTN 575



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 195/429 (45%), Gaps = 16/429 (3%)

Query: 108 SPSTVRHVIE-----KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           SPS V + I      K+ G R  + LL  +         P+ V     Y+ +IN      
Sbjct: 194 SPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG---CEPDIVT----YNVLINAMCNEG 246

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
             D A + +  + S   +    T++ +++    +    E    F  M    CAPD++ F+
Sbjct: 247 DVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFN 306

Query: 223 IVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +++ LC++     A    D + +    PD++ Y++++ G C  G + +A  +   +K  
Sbjct: 307 TIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSY 366

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G +P+   Y+ V+  LC   Q   A ++ AEM+   C P+ +TFN ++    +    ++ 
Sbjct: 367 GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRA 426

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           ++V  QM   GC  D +TYN +ID  C +  ++DA+++L+++   GC P+  TFN + + 
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +  +     A ++   M    C P+  T+N ++            ++  K M EN   PN
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPN 546

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
            +TY I++      G    A K +  M       P    Y  V+  + +AG++++  +L+
Sbjct: 547 QSTYNIVVDALLKAGKTQEALKLLSGMTNG---TPDLITYNTVISNITKAGKMEEALDLL 603

Query: 522 EKMVDRGFT 530
             MV  G +
Sbjct: 604 RVMVSNGLS 612



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 179/363 (49%), Gaps = 2/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M  R    +V T+SIL+    +A    +A+   + M   GC PD + ++++I+
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            +C +    EA +    L     +PD + YT +++  C +    E E +F EM      P
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  T++ ++ +LC+ G + RA  V   M E GC P+ +T+++++       R +  +++ 
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +++K  GC+ DTI Y  ++   C   + E A +++  MV   C P+  TFN +   + + 
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQK 420

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V+ A ++  +M +  C P+ VTYN ++      +  D  ++L   ++    +P++ T+
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTF 480

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+   C +  W +A + +  M+   C  P ++ +  V+  L + G L +  E ++ M 
Sbjct: 481 NTLLKGLCSVDRWEDAEQLMVNMMHSDC-PPDATTFNTVITSLCQKGLLLQAIETLKIMA 539

Query: 526 DRG 528
           + G
Sbjct: 540 ENG 542



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 176/348 (50%), Gaps = 5/348 (1%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           TV T++ +V  Y RAG   +A    + M      PD   F+ +I  LC + R  +A + F
Sbjct: 129 TVVTYNTMVNGYCRAGRIEDARRLISGMPF---PPDTFTFNPLIRALCVRGRVPDALAVF 185

Query: 242 DS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           D  L     P V+ Y+ L+   C+A    +A  +  EM+  G +P++ TY+++I+A+C  
Sbjct: 186 DDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNE 245

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G +  A ++ +++   GC+P+++T+  +++    + R ++V +++ +M    C  D +T+
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTF 305

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N ++   C+ G ++ AIKV++ M   GC P+  T++ I   +  +G V+ A  +  ++K 
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
             C+P+T+ Y  +++   + +  +   +L  EM  ++  P+  T+  +I   C  G  + 
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A K + +M E  C  P    Y  ++  L     +    EL+  +   G
Sbjct: 426 AIKVVEQMSENGC-NPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 171/405 (42%), Gaps = 35/405 (8%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            D A   +D M        + T+S ++      G   +AV   +R++ YGC PD IA++ 
Sbjct: 318 VDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 377

Query: 224 VISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           V+  LC   +   A+    + +     PD + +  ++   C+ G +  A +V  +M   G
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P++ TY+ +ID LC    I  A ++ + +   GC+P+ +TFN L++      R E   
Sbjct: 438 CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAE 497

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           Q+   M    C  D  T+N +I   C+ G L  AI+ L  M   GC PN ST+N++   +
Sbjct: 498 QLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL 557

Query: 403 SKLGDVNGAHRMY-----------------------GKMKDL----------KCEPNTVT 429
            K G    A ++                        GKM++              P+T+T
Sbjct: 558 LKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTIT 617

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L         TD  +++   +++  + P+   Y  ++  +C     + A      M+
Sbjct: 618 YRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMV 677

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
              C+ P  S Y ++L+ L     L + ++L+  +   G   + L
Sbjct: 678 SSGCM-PDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSL 721



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 176/368 (47%), Gaps = 9/368 (2%)

Query: 105 HSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           H   P  V +  +++  C V      +++LS       +P+ +     Y  ++     + 
Sbjct: 331 HGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA----YTTVLKGLCSIE 386

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q++ A   +  M   +      TF+ ++    + GL   A+    +M E GC PD + ++
Sbjct: 387 QWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYN 446

Query: 223 IVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC +R   +A     +L+    +PD++ +  L++G C      +AE++   M  +
Sbjct: 447 SIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS 506

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
              P+  T++ VI +LC+ G + +A +    M E GC PN  T+N ++   +KA +T++ 
Sbjct: 507 DCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L++ + M       D ITYN +I    K GK+E+A+ +L  MV  G +P+  T+  +   
Sbjct: 567 LKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYG 624

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           I +    + A RM  +++D+   P+   YN ++  F  +  TD+ +     M  +   P+
Sbjct: 625 ICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPD 684

Query: 462 VNTYRILI 469
            +TY IL+
Sbjct: 685 ESTYIILL 692



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 155/336 (46%), Gaps = 42/336 (12%)

Query: 228 LCRKRRASEAQSFFDSLKD-----KFEPDVIVYTN-LVRGWCRAGNISEAERVFREMKMA 281
           L ++    +A +  DS+       K  P  +V  N L++  C  G +++AERVF  +   
Sbjct: 68  LIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL--- 124

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAH--------------------------------DV 309
           G    V TY+ +++  CR G+I  A                                  V
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAV 184

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F +ML  GC P+ +T++ L+    KAS   + + + ++M+  GCE D +TYN LI+  C 
Sbjct: 185 FDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCN 244

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +G +++A+ +L+ +   GC P+A T+  + + +           ++ +M   KC P+ VT
Sbjct: 245 EGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVT 304

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +N ++         D  +K+   M E+   P++ TY  ++   C +G  ++A + +  + 
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLK 364

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
              C KP +  Y  VL+ L    Q +  EEL+ +MV
Sbjct: 365 SYGC-KPDTIAYTTVLKGLCSIEQWEHAEELMAEMV 399



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 124/277 (44%), Gaps = 5/277 (1%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   +I+  C  R     +++LS       +P+ V     ++ ++     V +++ A   
Sbjct: 444 TYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT----FNTLLKGLCSVDRWEDAEQL 499

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +  M   +      TF+ ++    + GL  +A+     M E GC P++  ++IV+  L +
Sbjct: 500 MVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLK 559

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
             +  EA      + +   PD+I Y  ++    +AG + EA  + R M   G+ P+  TY
Sbjct: 560 AGKTQEALKLLSGMTNG-TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITY 618

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
             +   +CR     RA  +   + ++G  P++  +N+++    +  RT+  +  +  M  
Sbjct: 619 RSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVS 678

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
            GC  D  TY  L++    +  L++A ++L ++   G
Sbjct: 679 SGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLG 715


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 222/472 (47%), Gaps = 20/472 (4%)

Query: 54  PEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVR 113
           P+ TL    FHS    H R NP  +S    ++    T+  +  G   IS+   I   T+ 
Sbjct: 17  PKPTL----FHSY---HSRTNPIATSIEVSTIIE--TLDPMEDGLKVISS--RIRSYTIT 65

Query: 114 HVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDL 173
            V+++    R G  L      F W + +   +    +   +I    K   F+L W  +  
Sbjct: 66  SVLQEQPDTRLGFRL------FIW-SLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQE 118

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           +K+  ++I+ + FS+L+  Y  AG+  +AV +F  M ++ C PD  AF++++  L RK  
Sbjct: 119 LKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEA 178

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A + ++  LK    PDV+ Y  L+ G C+     +A  +F EM   GI PN   YSI
Sbjct: 179 FLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSI 238

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           V+  LC+  +I  A  +F++M   GC  + IT+N L+    K+   +    +   + + G
Sbjct: 239 VLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDG 298

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                I Y  LI+   +  + E+A      M+R+   P+   + ++ R +S+ G V  A 
Sbjct: 299 HILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEAL 358

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            + G+M +    P+T+ YN L++ F      D    L+ E+ +++  PN +TY ILI   
Sbjct: 359 TLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM 418

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           C  G  N A    +EM +  CL P    +  ++  L +A +L++   L  +M
Sbjct: 419 CKNGLINKAQHIFKEMEKLGCL-PSVVTFNSLINGLCKANRLEEARLLFYQM 469



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 170/337 (50%), Gaps = 14/337 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   K    D A+  + L+      + V  +  L+    RA    EA   + +M 
Sbjct: 271 YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKML 330

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
                PD + ++I+I  L ++ R +EA +    + ++   PD I Y  L++G+C  G + 
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE +  E+      PN +TYSI+I  +C+ G I +A  +F EM ++GC P+ +TFN+L+
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 330 RVHVKASRTEKVLQVYNQMK---------RLGCEADTI----TYNFLIDCHCKDGKLEDA 376
               KA+R E+   ++ QM+         RL    D +    +   +++  C+ G +  A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            K+L  +V  G  P+  T+N++     K G++NGA +++ +M+     P++VTY  L+  
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
              +   +  L++ ++M +    P  +TY+ ++T  C
Sbjct: 571 LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC 607



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 167/335 (49%), Gaps = 15/335 (4%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           T+++L+  + ++G   +A      + + G     I +  +I+ L R RR  EA  ++   
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L++  +PDV++YT ++RG  + G ++EA  +  EM   G++P+   Y+ +I   C  G +
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +  E+ +  C PN+ T++ L+    K     K   ++ +M++LGC    +T+N L
Sbjct: 390 DEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449

Query: 364 IDCHCKDGKLEDAIKVLNSM--VRK---------GCNP--NASTFNMIFRCISKLGDVNG 410
           I+  CK  +LE+A  +   M  VRK         G +   + ++  ++   + + G +  
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK 509

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A+++  ++ D    P+  TYNIL+  F    + +   KL KEM+     P+  TY  LI 
Sbjct: 510 AYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLID 569

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
                G   +A +   +M+++ C+ P SS Y+ ++
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGCV-PESSTYKTIM 603



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 14/215 (6%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+SIL+    + GL  +A H F  ME+ GC P  + F+ +I+ LC+  R  EA+  F  +
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 245 KDKFEP--------------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           +   +P              D+     ++   C +G I +A ++  ++  +G+ P++ TY
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I+I+  C+ G I  A  +F EM   G  P+S+T+  L+    +A R E  L+++ QM +
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK 589

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
            GC  ++ TY  ++   C++  +  A+ V    +R
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLALSVWMKYLR 624


>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
 gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 203/434 (46%), Gaps = 11/434 (2%)

Query: 95  SLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEM 154
           +L  S IS  H +    ++         R     L  L  F W   +  +VH P++Y+ M
Sbjct: 127 ALNESGISATHDLVSQLLK---------RFSNQWLIALGVFIWAKNQTGYVHKPEIYNSM 177

Query: 155 INLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           I++ GK R+F L W  +  M   N  +++ T   +++R VR G   EA+ AF  +E++G 
Sbjct: 178 IDILGKSRKFSLMWDLVQEMSGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEKFGL 237

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           +    A ++++ IL R  R  +A++     +     D   Y  L  G+C+A    +A + 
Sbjct: 238 SKSTEAMNVLMDILARNGRVEDARAVALEFEGCLTLDYRSYNILSSGYCKARMFGDARKT 297

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             EM+  G  PNV +Y+  I+A            +  EM E GC P+ IT+   +R   K
Sbjct: 298 MEEMEERGFHPNVVSYTAFIEAYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYIRALGK 357

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A +  K L++  ++KR G    T  Y  LI   C  G+L+DA  +   + ++G   +   
Sbjct: 358 ARQINKALEICEEIKRNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGM 417

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +  +      L     A ++  KM++  C+P+  TY  L++M    KS  M+  L   M 
Sbjct: 418 YKAMISAACALSQDESALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMF 477

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           EN+V  ++ TY +L+      G    A  + +E +  K + P    Y+++L++L R   +
Sbjct: 478 ENDVSIDIVTYDLLVHGLRKQGKLKYACFFFQEAV-LKGMVPCDKTYKILLEELERK-NM 535

Query: 515 QKHEELVEKMVDRG 528
            + +  +EK++ R 
Sbjct: 536 AEMKGKIEKLMLRA 549



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 99/241 (41%), Gaps = 37/241 (15%)

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +ID L +  + +   D+  EM  +    + +T   +M+  V+  +  + +  +  ++
Sbjct: 174 YNSMIDILGKSRKFSLMWDLVQEMSGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLE 233

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G    T   N L+D   ++G++EDA  V  ++  +GC        + +R         
Sbjct: 234 KFGLSKSTEAMNVLMDILARNGRVEDARAV--ALEFEGC------LTLDYR--------- 276

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                              +YNIL   +  ++      K  +EMEE    PNV +Y   I
Sbjct: 277 -------------------SYNILSSGYCKARMFGDARKTMEEMEERGFHPNVVSYTAFI 317

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             Y     + N    + EM E+ C  P    Y + ++ L +A Q+ K  E+ E++   GF
Sbjct: 318 EAYGEQKDFRNVEIILNEMQEKGC-PPDLITYTVYIRALGKARQINKALEICEEIKRNGF 376

Query: 530 T 530
            
Sbjct: 377 V 377


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 243/536 (45%), Gaps = 71/536 (13%)

Query: 59  ISEKFHSLI-KDHHRKNPNPSSNSNPSLNPD---FTIPSLSLGFSQISTAHSISPSTVRH 114
           +S +F SL  K ++ K P  S NS  +  P+   F  P++S     I+  H     T+  
Sbjct: 14  LSTRFPSLDPKLNNTKTPFSSPNSTYT-TPNSHTFDTPTIS---QLIAKQHWSKLKTIVK 69

Query: 115 VIEKSCGVRH-----GIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWH 169
               S  ++H       P L +L +F W       +H+ + +  +++L    + ++    
Sbjct: 70  ETNPSSLLQHLFNSEAQPDL-ILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRA 128

Query: 170 FIDLMKSRNVEITVDTF------------------SILVRRYVRAGLAAEAVHAFNRMEE 211
            +D   ++N   +  T                    +LV  YV+ G    A+  F+R  +
Sbjct: 129 LLDSF-AKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 212 YG-------CAP----------------------------DKIAFSIVISILCRKRRASE 236
           YG       C P                            + + F +VI+ LC+  +  +
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247

Query: 237 AQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A    + +K   F P VI Y  ++ G+C+AG + +A+ + +EM    I PN  T++I+ID
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID 307

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
             CR   +T A  VF EM   G +PN +T+N+L+       + ++ L + ++M  +G + 
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           + +TYN LI+  CK   L++A ++L+ + ++G  PN  TFN +     K G ++ A  + 
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLR 427

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             M D    PN  TYN L+  F    +     KL KEME N ++ ++ TY IL+   C  
Sbjct: 428 SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKK 487

Query: 476 GHWNNAYKYIREM--IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G    A + + EM  +E+K  +     Y ++++     G+L++   L+ +M+++G 
Sbjct: 488 GETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 543



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 162/322 (50%), Gaps = 4/322 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +IN   KV +F  A   ++ MK+     +V T++ ++  Y +AG   +A      M 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
                P++I F+I+I   CR    + A+  F+ + +   +P+V+ Y +L+ G C  G + 
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  +M   G++PNV TY+ +I+  C+   +  A ++  ++ + G  PN ITFN L+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA R +    + + M   G   +  TYN LI   C++G +++A K+   M   G  
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE---PNTVTYNILMQMFATSKSTDMV 446
            +  T+N++   + K G+   A R+  +M  ++ +    N VTYN+L++ F      +  
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA 531

Query: 447 LKLKKEMEENEVEPNVNTYRIL 468
            +L  EM E  + PN  TY IL
Sbjct: 532 NRLLNEMLEKGLIPNRTTYDIL 553



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 4/229 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN      + D A    D M    ++  V T++ L+  + +  +  EA    + + 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G AP+ I F+ +I    +  R  +A      + D    P+V  Y  L+ G+CR GN+ 
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML---EVGCEPNSITFN 326
           EA ++ +EM+  G++ ++ TY+I++DALC+ G+  +A  +  EM    + G   N +T+N
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYN 516

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            L++      + E+  ++ N+M   G   +  TY+ L D   + G + D
Sbjct: 517 VLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 565


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 175/348 (50%), Gaps = 2/348 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            ++ L+  + + G    A   F+ M     +PD I ++ +I    +  +  E Q+ F  +
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +  +PD + YT L+  +C+AG +  A  +  EM   G+ PN+ TY  +ID LC+ G++
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A+++  EM + G + N   +N+++    KA   E+ +++  +M+  G + D ITY  +
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +C+ G ++ A K+L  M+ +G  P   TFN++      LG +    R+ G M +   
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ +TYN LM+      S +   K+ K M    V P+ NTY ILI  +C   +   A+ 
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             +EMI EK   P  + Y  ++++  +  +  +  EL E+M   G  A
Sbjct: 665 LYKEMI-EKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVA 711



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 175/347 (50%), Gaps = 2/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++I++    R G   EA     +M+     PD +++S VI   C      +A    D +
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + K  +P+   Y +++   C+ G   EAE+V REM    I P+   Y+ +I    + G +
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A+  F EML     P+ IT+  L++   +  +  +   ++++M   G + D +TY  L
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +CK G++ +A  + N MV+ G  PN  T+  +   + K G+++ A+ +  +M+    
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           + N   YN ++     + + +  +KL KEME   ++P+  TY  +I  YC +G  + A+K
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            ++EM+ ++ L+P    + +++      G L+  + L+  M+++G  
Sbjct: 560 LLQEML-DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 156/322 (48%), Gaps = 2/322 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M SR ++    T++ L+  Y +AG    A    N M + G  P+ + +  +I  LC+   
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A    D ++ K  + +V +Y ++V G C+AGNI +A ++ +EM++AGI P+  TY+ 
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VIDA CR G I +AH +  EML+ G +P  +TFN LM         E   ++   M   G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D ITYN L+  HC    +    K+   M  +G  P+++T+N++ +   K  ++  A 
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +Y +M +    P   +YN L++ F   +      +L +EM  + +  +   Y   + M 
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMC 723

Query: 473 CGMGHWNNAYKYIREMIEEKCL 494
              G          E I EKCL
Sbjct: 724 YEEGDVEITLNLCDEAI-EKCL 744



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 184/387 (47%), Gaps = 6/387 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+ V    L H    L G VR    A  + D M S+ +     T++ L++ + + G   E
Sbjct: 361 PDNVVYTTLIHGFFKL-GHVRT---ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
             + F+ M   G  PD++ ++ +I + C+      A S  + + +    P+++ Y  L+ 
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C+ G +  A  +  EM+  G+Q NV  Y+ +++ +C+ G I +A  +  EM   G +P
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           ++IT+  ++  + +    +K  ++  +M   G +   +T+N L++  C  G LED  ++L
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ KG  P+A T+N + +       +N   ++Y +M++    P++ TYNIL++    +
Sbjct: 597 GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
           ++      L KEM E    P V +Y  LI  +     +  A +   EM     +  G  +
Sbjct: 657 RNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADG-EI 715

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDR 527
           Y   +      G ++    L ++ +++
Sbjct: 716 YNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 179/407 (43%), Gaps = 34/407 (8%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHE--MINLAGKVRQFDLAWHFI-DLMKSRNVEITVDTFS 187
           VL+FF+W   R E    P L     +I++A       LA   + D   +  +EI V    
Sbjct: 119 VLAFFDWARVRRE----PSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVK--- 171

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
                        +  H      +Y   P+ IAF I   +L      SEA+   D L   
Sbjct: 172 -----------MTQFTHRLIYTYKYW-GPNPIAFDIFFQVLVEIGHLSEARKLLDKL--- 216

Query: 248 FEPDVIVYTNLVRGWC-RAGNISE----AERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
               ++V  +    +  R  N SE    A +VF E    GI  N  +Y+I+I +LCR G+
Sbjct: 217 LSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGK 273

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  AH +  +M      P+ ++++ ++  +      +K L++ + M+  G + +  TYN 
Sbjct: 274 VKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNS 333

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           +I   CK GK  +A KVL  M+ +   P+   +  +     KLG V  A++ + +M   K
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TY  L+Q F           L  EM    ++P+  TY  LI +YC  G   NA+
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               EM++   + P    Y  ++  L + G+L    EL+++M  +G 
Sbjct: 454 SLHNEMVQMG-MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499


>gi|449436631|ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205322 [Cucumis sativus]
          Length = 1559

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 190/366 (51%), Gaps = 8/366 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMK-SRNVEITVDTFSILVRR 192
           FFNWV +  +F H+ + Y+ M+++ GK  +FDL+W  I+ M+ S +      TF IL +R
Sbjct: 618 FFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQSPSASPDHATFRILFKR 677

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD- 251
           Y  A L +EA+ A+ R+ E+    D+ +F  +I  LC  R   EAQ        K + D 
Sbjct: 678 YALAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDS 736

Query: 252 -VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
              ++  ++RGW + G  S+    + EM   G++ ++++YSI +D  C+ G+  +A  ++
Sbjct: 737 STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY 796

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM + G + + + +N ++     +   +   +V+++MK +GC+ + +T N +I   C++
Sbjct: 797 KEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN 856

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+ +DA  +L+ M+++ C PN  T++  FR + K  ++     ++ +M      P   TY
Sbjct: 857 GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEI---LVLFDRMIKYGVHPKMDTY 913

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
            +L++ F        V  +  +MEE    PN   Y  LI      G  + A KY  EM+ 
Sbjct: 914 VMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMV- 972

Query: 491 EKCLKP 496
            K L P
Sbjct: 973 AKGLSP 978


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 212/440 (48%), Gaps = 51/440 (11%)

Query: 139 TARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA 196
           T R      P L  Y  +I+   K R+ D A      MK++ +   V +++ L+  +  +
Sbjct: 291 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLS 350

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVY 255
           G   +A   FN M + G  PD    S++I +LC+K +  EA    +  ++    PDV+  
Sbjct: 351 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTC 410

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT-------------------------- 289
           T LV+G C    IS+A ++F +M+  G  PNV T                          
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 470

Query: 290 ---------------YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
                          YSI+ID LC+CG+   A ++F EM  +G  P+ I++ +L+    +
Sbjct: 471 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 530

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           + + +    ++N+M  +G + D  T++ LID  CK+GK+ +A ++L  M+++GC PN  T
Sbjct: 531 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 590

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +  + + +     ++ A +++ KM+ L C P+ VTY  LM+    + +    L+L K+M 
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650

Query: 455 EN------EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            +        +P+V +Y I+I   C  G  + A +  +EM +   + P    Y  ++   
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM-KALGVIPNVISYTSLIHGF 709

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            R+G+L+  + L  +MVD+G
Sbjct: 710 CRSGKLEDAKHLFNEMVDQG 729



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 205/404 (50%), Gaps = 18/404 (4%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           V  +P+   S  L  +M    GKV +   A   +++M  R   + + T+S L++      
Sbjct: 4   VGIQPDVTTSGVLI-DMFCKEGKVIE---ANELLEVMVQRGCILDIVTYSTLIKGLCMKH 59

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-------KFEP 250
             +EA   F  M++ GC PD IA+  ++  LC+  + + A      + +       K +P
Sbjct: 60  RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKP 119

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
            ++ Y+ ++ G C+     EA  +F+EMK  G+ P+V +Y+ +I   CR G+  +A  +F
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF 179

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EML+VG   +  T + L+ +  K  +  +  ++   M + GC  D +TY+ LI   C  
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMK 239

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD------LKCE 424
            ++ +A ++  SM + GC P+A  +  + + + + G++N A +++ +M +      +KC+
Sbjct: 240 HRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCK 299

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P  ++Y+I++      +  D   +L KEM+   + P+V +Y  LI  +C  G W  A   
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             EM++   ++P  +   +++  L + G++ +  +L+E ++ RG
Sbjct: 360 FNEMLDVG-IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 402



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 158/279 (56%), Gaps = 9/279 (3%)

Query: 212 YG--CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
           YG  C P+ I++SI+I  LC+  R  EA+  F  +K     PDVI YT+L+ G+CR+G  
Sbjct: 475 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 534

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A+ +F EM   G+QP+V T+S++ID LC+ G++  A+++   M++ GC PN++T+  L
Sbjct: 535 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 594

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI----KVLNSMV 384
           ++      R  +  Q++ +M++LGC  D +TY  L+   C+ G ++ A+    K+L+   
Sbjct: 595 VKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTG 654

Query: 385 RKGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           + G N  P+  ++++I   + K G  + A  ++ +MK L   PN ++Y  L+  F  S  
Sbjct: 655 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGK 714

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            +    L  EM +  V+ N  TY ++I  +C  G  + A
Sbjct: 715 LEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 51/431 (11%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+   +  +++ A    + M    +   V T S+L+    + G   EA   
Sbjct: 154 PDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANEL 213

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
              M + GC  D + +S +I  LC K R SEA   F S+ K    PD I Y  L++G C+
Sbjct: 214 LEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQ 273

Query: 265 AGNISEAERVFREM----KMAGIQ--PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
            GNI+ A ++ +EM       GI+  P + +YSI+ID LC+  +   A ++F EM   G 
Sbjct: 274 TGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGI 333

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+ I++  L+     + + EK   ++N+M  +G + D  T + LID  CK GK+ +A K
Sbjct: 334 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 393

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           +L  ++++GC P+  T   + + +     ++ A +++ KM+ L C PN VT   LM+   
Sbjct: 394 LLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 453

Query: 439 TSKSTDMVLKLK-----------------------------------------KEMEENE 457
            S +  + L+L                                          KEM+   
Sbjct: 454 QSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG 513

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V +Y  LI  +C  G W +A     EM++   ++P  + + +++  L + G++ + 
Sbjct: 514 VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG-VQPDVTTFSVLIDMLCKEGKVIEA 572

Query: 518 EELVEKMVDRG 528
            EL+E M+ RG
Sbjct: 573 NELLEVMIQRG 583



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 145/276 (52%), Gaps = 9/276 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A      MK+  V   V +++ L+  + R+G   +A + FN M 
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   FS++I +LC++ +  EA    + +  +   P+ + YT LV+G C    IS
Sbjct: 546 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRIS 605

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE------VGCEPNSI 323
           EA ++F +M+  G  P+V TY  ++  LC+ G I  A ++  +ML          +P+ I
Sbjct: 606 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 665

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +++ ++    K  R ++  +++ +MK LG   + I+Y  LI   C+ GKLEDA  + N M
Sbjct: 666 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 725

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           V +G   NA T++++     K G ++ A  ++ KM+
Sbjct: 726 VDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 759


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 189/410 (46%), Gaps = 11/410 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L  F    AR     +   Y+ +IN   K           + +  R     V T++ L
Sbjct: 19  RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTL 78

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-- 247
           +    +AG   EA      M   GC P+ + +S++I+ LC+  R  EA+     +  K  
Sbjct: 79  IDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 138

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG--IQPNVYTYSIVIDALCRCGQIT 304
              P++I Y + + G C+    +EA  + R ++     + P+  T+S +ID LC+CGQI 
Sbjct: 139 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQID 198

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  VF +M+  G  PN IT+N L+    KA + E+   +   M   G   D ITY+ L+
Sbjct: 199 EACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 258

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNA-----STFNMIFRCISKLGDVNGAHRMYGKMK 419
           D  CK  ++++A+++L+ M  +GC PN       TFN++     K G+   A  ++ +M 
Sbjct: 259 DAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV 318

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
               +P+ +T+  L+     +   +    +   M    V PNV TY  L+   C  G   
Sbjct: 319 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 378

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            A +++ EM+   C+ P S  Y  ++  L RA +     +LV ++   G+
Sbjct: 379 EACQFLEEMVSSGCV-PDSITYGSLVYALCRASRTDDALQLVSELKSFGW 427



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 6/310 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   K  + + A   I+ M  + V   V T+S+LV  + +A    EA+   + M 
Sbjct: 219 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 278

Query: 211 EYGCAP-----DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
             GC P     DK+ F+I+I+  C+     +A + F+ +  K  +PDV+ +  L+ G C+
Sbjct: 279 SRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 338

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG +  A  +   M   G+ PNV TY+ ++  LC+ G+I  A     EM+  GC P+SIT
Sbjct: 339 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 398

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+    +ASRT+  LQ+ +++K  G + DT+TYN L+D   K GK E AI VL  MV
Sbjct: 399 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 458

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P++ TF   F  + + G++ G   +   +      P+  T + ++     S   D
Sbjct: 459 GKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518

Query: 445 MVLKLKKEME 454
            V  + KE E
Sbjct: 519 DVKAMIKEFE 528



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 6/285 (2%)

Query: 255 YTNLVRGWCRAGNISEAERVFR-EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           Y  +++  CRAG+ + A  +FR EM   G+ P + TY+ +I+ LC+   +    ++F E+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           +E G  P+ +T+N L+    KA   E+  +++  M   GC  + +TY+ LI+  CK G++
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 374 EDAIKVLNSMVRKGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKMKD--LKCEPNTVT 429
           ++A +++  M RK C+  PN  T+N     + K      A  +   ++D  L+  P+TVT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           ++ L+         D    +  +M      PNV TY  L+   C       A+  I  M+
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            +K + P    Y +++    +A ++ +  EL+  M  RG T   L
Sbjct: 244 -DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVL 287



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 6/249 (2%)

Query: 287 VYTYSIVIDALCRCGQITRAHDVF-AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           V  Y+IV+ +LCR G   RA ++F  EM   G  P  +T+N ++    K++     ++++
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            ++   G   D +TYN LID  CK G LE+A ++   M  +GC PN  T++++   + K+
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 406 GDVNGAHRMYGKMKDLKCE--PNTVTYNILMQMFATSKSTDMVLKLKKEMEENE--VEPN 461
           G ++ A  +  +M    C+  PN +TYN  +        T    +L + + +    V P+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             T+  LI   C  G  + A     +MI    + P    Y  ++  L +A ++++   ++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV-PNVITYNALVNGLCKADKMERAHAMI 239

Query: 522 EKMVDRGFT 530
           E MVD+G T
Sbjct: 240 ESMVDKGVT 248


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 202/392 (51%), Gaps = 10/392 (2%)

Query: 143 EFVHSPDL--YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           E  H P L   + ++N   L GKV     A   ID M     +    T+  ++    ++G
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSD---AVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYT 256
             A A+    +MEE     D + +SI+I  LC+      A + F+ ++ K F+ D+I Y 
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L+ G+C AG   +  ++ R+M    I PNV T+S++ID+  + G++  A  +  EM++ 
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  PN+IT+N+L+    K +R E+ +Q+ + M   GC+ D +T+N LI+ +CK  +++D 
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +++   M  +G   N  T+N + +   + G +  A +++ +M   +  P+ V+Y IL+  
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
              +   +  L++  ++E++++E ++  Y I+I   C     ++A+     +   K +K 
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL-PLKGVKL 541

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +  Y +++ +L R   L K + L  KM + G
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEG 573



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 198/395 (50%), Gaps = 4/395 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F + + +RP  + +   ++ + +   K +Q++L       M+S+ +  ++ T SI++  +
Sbjct: 76  FRDMIQSRP--LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
            R    + A     ++ + G  PD + F+ +++ LC + R SEA    D + +   +P +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I    LV G C  G +S+A  +   M   G QPN  TY  V++ +C+ GQ   A ++  +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M E   + +++ ++ ++    K    +    ++N+M+  G +AD ITYN LI   C  G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            +D  K+L  M+++  +PN  TF+++     K G +  A ++  +M      PNT+TYN 
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F      +  +++   M     +P++ T+ ILI  YC     ++  +  REM   +
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLR 432

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            +   +  Y  ++Q   ++G+L+  ++L ++MV R
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 186/355 (52%), Gaps = 2/355 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M     + T+ T + LV      G  ++AV   +RM E G  P+++ +  V++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
           ++C+  + + A      ++++  + D + Y+ ++ G C+ G++  A  +F EM++ G + 
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++ TY+ +I   C  G+      +  +M++    PN +TF+ L+   VK  +  +  Q+ 
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M + G   +TITYN LID  CK+ +LE+AI++++ M+ KGC+P+  TFN++     K 
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             ++    ++ +M       NTVTYN L+Q F  S   ++  KL +EM    V P++ +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +IL+   C  G    A +   + IE+  ++    +Y +++  +  A ++    +L
Sbjct: 477 KILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 174/372 (46%), Gaps = 3/372 (0%)

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           ++  D    F D+++SR +   +D F+ L     +       +    +ME  G A     
Sbjct: 67  IKADDAVDLFRDMIQSRPLPTVID-FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125

Query: 221 FSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
            SI+I+  CR R+ S A S     +K  +EPD +++  L+ G C    +SEA  +   M 
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G +P + T + +++ LC  G+++ A  +   M+E G +PN +T+  ++ V  K+ +T 
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
             +++  +M+    + D + Y+ +ID  CKDG L++A  + N M  KG   +  T+N + 
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
                 G  +   ++   M   K  PN VT+++L+  F          +L KEM +  + 
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           PN  TY  LI  +C       A + +  MI + C  P    + +++    +A ++    E
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC-DPDIMTFNILINGYCKANRIDDGLE 424

Query: 520 LVEKMVDRGFTA 531
           L  +M  RG  A
Sbjct: 425 LFREMSLRGVIA 436



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 159/322 (49%), Gaps = 1/322 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I       ++D     +  M  R +   V TFS+L+  +V+ G   EA      M 
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G AP+ I ++ +I   C++ R  EA    D +  K  +PD++ +  L+ G+C+A  I 
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +   +FREM + G+  N  TY+ ++   C+ G++  A  +F EM+     P+ +++  L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                    EK L+++ ++++   E D   Y  +I   C   K++DA  +  S+  KG  
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +A  +N++   + +   ++ A  ++ KM +    P+ +TYNIL++            +L
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600

Query: 450 KKEMEENEVEPNVNTYRILITM 471
            +EM+ +    +V+T +++I M
Sbjct: 601 IEEMKSSGFPADVSTVKMVINM 622



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 38/402 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N+  K  Q  LA   +  M+ RN+++    +SI++    + G    A + FN ME
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290

Query: 211 EYGCAPDKIAFSIVISILCR---------------KRRASEAQSFFDSLKDKF------- 248
             G   D I ++ +I   C                KR+ S     F  L D F       
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350

Query: 249 --------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                          P+ I Y +L+ G+C+   + EA ++   M   G  P++ T++I+I
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +  C+  +I    ++F EM   G   N++T+N L++   ++ + E   +++ +M      
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D ++Y  L+D  C +G+LE A+++   + +     +   + +I   +     V+ A  +
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  +     + +   YNI++       S      L ++M E    P+  TY ILI  + G
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
                 A + I EM +        S  +MV+  L  +G+L K
Sbjct: 591 DDDATTAAELIEEM-KSSGFPADVSTVKMVINML-SSGELDK 630


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 197/388 (50%), Gaps = 12/388 (3%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +++   +  + D A   +  MK + VE    TFS L+  +  A    EA+ 
Sbjct: 78  APDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALK 137

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK----DKFEPDVIVYTNLVR 260
            +  +    C  D ++ S +I+ LCR+RR  EA   F  ++      ++PDV+ YT L+ 
Sbjct: 138 LYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALID 197

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+C++GN+ +A ++   M+     PNV TYS ++  LC+ G + +A D+F  M   GC P
Sbjct: 198 GFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 257

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N +T+  L+     A + +    + ++M    C ADT++YN L+D +C+ G++E+A ++ 
Sbjct: 258 NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLF 317

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK-CEPNTVTYNILMQMFAT 439
             M  K C P+  T+  + R       +  A  +   MK     +P+ VTY+I++  ++ 
Sbjct: 318 KEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSR 377

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +K      +  +EM    V PN  TY  LI   C  G  N+A + ++ +      KP   
Sbjct: 378 AKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD-----KPDVV 432

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            Y +V++ L    + ++   L+E+MV++
Sbjct: 433 TYTIVIEGLCGTDRTEEALTLLEEMVNK 460



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 170/346 (49%), Gaps = 7/346 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++++V    +A L ++A      M +    APD + +S VI+  C++     A      
Sbjct: 11  TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70

Query: 244 L--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +  +D   PDV+ YT++V G CR G +  A  + REMK+ G++P+ +T+S +I   C   
Sbjct: 71  MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL---GCEADTI 358
           ++  A  ++ E+L   C  ++++ + L+    +  R  +  +++ +M+       + D +
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  LID  CK G LE A+K+L  M  + C PN  T++ +   + K GD++ A  ++ +M
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
               C PN VTY  L+     +   D    L  EM       +  +Y  L+  YC +G  
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             A +  +EM  + CL P    Y  +++    A +L++   L+E M
Sbjct: 311 EEAKQLFKEMAAKSCL-PDRITYTCLVRGFCNASRLEEARFLLENM 355



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 194/446 (43%), Gaps = 51/446 (11%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           +    F  +  R +    PD+  Y  +I+   K    + A   + +M+ R     V T+S
Sbjct: 169 EAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 228

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            L+    +AG   +A+  F RM   GC P+ + ++ +I  LC   +   A+   D +   
Sbjct: 229 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 288

Query: 248 FEP-DVIVYTNLVRGWCRAGNISEAERVFREMKM-------------------------- 280
             P D + Y  L+ G+CR G I EA+++F+EM                            
Sbjct: 289 CCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA 348

Query: 281 ----------AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
                     AGI P+V TYSIV+    R  +   A +   EM+     PN++T+++L+ 
Sbjct: 349 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 408

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              KA R    ++V   + +     D +TY  +I+  C   + E+A+ +L  MV K   P
Sbjct: 409 GLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEP 464

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL- 449
           +  TFN +   + +LGD++ A ++   M     EP  VTY  L++ F+ +   ++  +L 
Sbjct: 465 SVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELF 524

Query: 450 ---KKEMEENEVEPNV---NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              +++ +++    N+     +  LI   C     + A   + E+   +C +P       
Sbjct: 525 EVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSREC-EPAEEDCLA 583

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++  L RAG+ ++  +L+  +   G 
Sbjct: 584 IVDGLLRAGRTEEAGKLINSISKVGL 609



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 6/251 (2%)

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE-VGCEPNSITFNNLMRVHVKASRTEKV 341
           + PN  TY++V++ LC+    ++A++V  EM +     P+ +T++ ++    K    ++ 
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 342 LQVYNQM-KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            ++  +M  R G   D +TY  ++D  C+DGK++ A +++  M  KG  P+  TF+ +  
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE--- 457
                  V+ A ++Y ++    C  + V+ + L+      +      +L +EME  E   
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
            +P+V TY  LI  +C  G+   A K +  M   KC+ P    Y  +L  L +AG L + 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV-PNVVTYSSLLHGLCKAGDLDQA 243

Query: 518 EELVEKMVDRG 528
            +L  +M  +G
Sbjct: 244 LDLFRRMTSKG 254



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 28/235 (11%)

Query: 98  FSQISTAHSISPSTVRH--VIEKSCG---VRHGIPLLQVLSFFNWVTARPEFVHSPDLYH 152
           F Q   A +++P+ V +  +I+  C    V H + +L+              V  PD+  
Sbjct: 387 FIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK-------------NVDKPDVVT 433

Query: 153 EMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
             I + G     + + A   ++ M ++ VE +V TF+ ++    R G   EA      M 
Sbjct: 434 YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 493

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV--------YTNLVRGW 262
            +G  P  + ++ ++    R  R   A   F+ ++ K +             ++ L+RG 
Sbjct: 494 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGL 553

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           C+A  I +A  V  E++    +P       ++D L R G+   A  +   + +VG
Sbjct: 554 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 194/422 (45%), Gaps = 39/422 (9%)

Query: 148 PDLYHE--MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y    +IN    + + D A+  +  +     +    TF+ L+R     G   EA+H 
Sbjct: 78  PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 137

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F++M   G  P+ + +  +I+ LC+ R+ +EA + F  +  K   P+++ Y +L+ G C+
Sbjct: 138 FDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 197

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
                    +  EM  + I P+V+T + V+DALC+ G +  AHDV   M+  G EPN +T
Sbjct: 198 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 257

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N LM  H   +  +  ++V++ M    C A+ I+YN LI+ +CK   ++ A+ +   M 
Sbjct: 258 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 317

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           R+   PN  T+N +   +  +G +  A  ++ +M      P+ VTY  L      ++  D
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377

Query: 445 MVLKLKKEMEENE-----------------------------------VEPNVNTYRILI 469
             + L K +E +                                    ++PNV TY I+I
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              C  G    A K   EM +  C  P    Y ++ +   R  +  +  EL+E+M+ RGF
Sbjct: 438 HGLCKQGLLAEASKLFSEMNKNGC-SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGF 496

Query: 530 TA 531
           + 
Sbjct: 497 SV 498



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 163/357 (45%), Gaps = 35/357 (9%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAG 266
           +M+ +G  PD    +IVI+ LC   R   A S     LK   +PD   +T L+RG C  G
Sbjct: 70  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 129

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            I EA  +F +M   G QPNV TY  +I+ LC+  Q+T A ++F+EM+  G  PN +T+N
Sbjct: 130 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYN 189

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +L+    K    + V  + N+M       D  T N ++D  CK+G + +A  V++ M+ +
Sbjct: 190 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 249

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN  T+N +        +V+ A +++  M    C  N ++YN L+  +   +S D  
Sbjct: 250 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 309

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM------------------ 488
           + L +EM   E+ PN  TY  LI   C +G   +A     EM                  
Sbjct: 310 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 369

Query: 489 ----------------IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                           IE     P   +Y  +L  + RAG+L+   +L   +  +G 
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 16/349 (4%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           TVD F+ L+    +    +  +    +M+ +G  PD    +I+I+  C  RR   A S  
Sbjct: 581 TVD-FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 639

Query: 242 DSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             L K  F+PDV+ Y  L+ G C+             M   GI P+++TY+ +I ALC  
Sbjct: 640 AKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNL 686

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +      +  EM+     PN + F+ ++    K         V + M + G E D +TY
Sbjct: 687 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 746

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             L+D HC   ++++A+KV ++MV KGC PN  ++N++     ++  ++ A  +  +M  
Sbjct: 747 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 806

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                +TVTYN L+            + L  EM  +   P++ TYRIL+   C   H   
Sbjct: 807 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 866

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A   ++  IE   L     VY + +  + RAG+L+   +L   +  +G 
Sbjct: 867 AMVLLKA-IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 914



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 174/373 (46%), Gaps = 11/373 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           QV   FN  +       SP++  Y+ +I+   K+ ++      ++ M    +   V T +
Sbjct: 165 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 224

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            +V    + G+ AEA    + M   G  P+ + ++ ++   C +     A   FD++  K
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
               +VI Y  L+ G+C+  ++ +A  +F EM    + PN  TY+ +I  LC  G++  A
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 344

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM+  G  P+ +T+  L     K    +K + +   ++    + D   Y  ++D 
Sbjct: 345 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 404

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+LEDA  + +++  KG  PN  T+N++   + K G +  A +++ +M    C PN
Sbjct: 405 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 464

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TYN++ + F  +      ++L +EM       +V+T  +L+ M    G        + 
Sbjct: 465 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG--------LD 516

Query: 487 EMIEEKCLKPGSS 499
           + +++   KP SS
Sbjct: 517 QSVKQILCKPSSS 529



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 37/329 (11%)

Query: 236 EAQSFFDSLKDKFEPDVIV-YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA S F+ +  K  P   V +  L+    +  + S    + R+M   GI P+VYT +IVI
Sbjct: 28  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           ++LC   ++  A    A++L++G +P++ TF  L+R      +  + L ++++M   G +
Sbjct: 88  NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL--------- 405
            + +TY  LI+  CKD ++ +A  + + M+ KG +PN  T+N +   + KL         
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207

Query: 406 --------------------------GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
                                     G V  AH +   M     EPN VTYN LM     
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 267

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
               D+ +K+   M   +   NV +Y  LI  YC +   + A     EM  ++ L P + 
Sbjct: 268 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE-LTPNTV 326

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y  ++  L   G+LQ    L  +MV RG
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARG 355



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/498 (20%), Positives = 188/498 (37%), Gaps = 80/498 (16%)

Query: 107 ISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVR 162
           ++P+TV +  +I   C V     L   +S F+ + AR +    PDL  Y  + +   K R
Sbjct: 321 LTPNTVTYNTLIHGLCHVGR---LQDAISLFHEMVARGQI---PDLVTYRTLSDYLCKNR 374

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
             D A   +  ++  N +  +  ++ ++    RAG   +A   F+ +   G  P+   ++
Sbjct: 375 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 434

Query: 223 IVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           I+I  LC++   +EA   F  + K+   P+   Y  + RG+ R         +  EM   
Sbjct: 435 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494

Query: 282 GIQPNVYTYSIVI-------------DALCRCGQITR----------------------- 305
           G   +V T ++++               LC+    +R                       
Sbjct: 495 GFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHS 554

Query: 306 ----------AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
                     A   F  ML +   P+++ F  L+    K      VL +  QM   G   
Sbjct: 555 RSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPP 614

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNS----------------------MVRKGCNPNAS 393
           D  T N LI+  C   +L  A  VL                        M+ KG +P+  
Sbjct: 615 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIF 674

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T+N +   +  L +      +  +M + K  PN V ++ ++          +   +   M
Sbjct: 675 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 734

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            +  VEP+V TY  L+  +C     + A K    M+ + C+ P    Y +++    +  +
Sbjct: 735 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV-PNVRSYNILINGYCQIQR 793

Query: 514 LQKHEELVEKMVDRGFTA 531
           + K   L+E+M  +G  A
Sbjct: 794 MDKAMGLLEQMSLQGLIA 811



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 1/226 (0%)

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A   F  ML     P+++ FN L+    K      +L +  QM   G   D  T   
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           +I+  C   +++ A   L  +++ G  P+A+TF  + R +   G +  A  ++ KM    
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            +PN VTY  L+      +       +  EM    + PN+ TY  LI   C +  W +  
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + EM++ K + P       V+  L + G + +  ++V+ M+ RG
Sbjct: 206 TLMNEMVDSKIM-PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 1/178 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   ++++ D A   ++ M  + +     T++ L+      G    A+  F+ M 
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + + I++  LC+    +EA     +++    + D++VY   + G CRAG + 
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            A  +F  +   G+QP+V TY+I+I  LC+ G +  A+ +F +M E     NS +  N
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRN 958



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M   +  P+TV +N L+   A +K    +L L ++M+   + P+V T  I+I   C 
Sbjct: 33  FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCH 92

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +   + A+  + ++++    +P ++ +  +++ L   G++ +   L +KM+  GF
Sbjct: 93  LNRVDFAFSALAKILKLG-HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 146


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 190/371 (51%), Gaps = 5/371 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRMEEYGCAPDKIAF 221
           + DL +  +  +  +   +    F+ L++        ++A+     RM + GC P+  ++
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLVRGWCRAGNISEAERVFREM 278
           +I++  LC + R+ EA      + D      PDV+ YT ++ G+ + G++ +A   + EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              GI PNV TYS +I ALC+   + +A +V   M++ G  PN  T+N+++  +  + + 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           ++ +    +M   G E D +TYN L+D  CK+G+  +A K+ +SM ++G  P  +T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
            +  +  G +   H +   M      PN   ++IL+  +A     D  + +  +M +  +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+  TY  +I + C  G   +A +Y  +MI+E+ L PG+ VY  ++  L    +  K +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER-LSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 519 ELVEKMVDRGF 529
           EL+ +M+DRG 
Sbjct: 465 ELILEMLDRGI 475



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 178/379 (46%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K +  D A   +  M    V     T++ +V  Y  +G   EA+    +M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + ++ ++  LC+  R +EA+  FDS+ K   +P++  Y  L++G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E   +   M   GI PN Y +SI+I A  + G++ +A  VF++M + G  P+++T+  ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            +  K+ R E  ++ + QM         I YN LI   C   K + A +++  M+ +G  
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   FN I     K G V  + +++  M  +  +P+ +TY+ L+  +  +   D   KL
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    ++P+  TY  LI  YC +    +A    REM E   + P    Y ++LQ L 
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLF 595

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  +    +EL   + + G
Sbjct: 596 QTRRTAAAKELYVGITESG 614



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 188/388 (48%), Gaps = 10/388 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R ++  + T+  L++ Y   G   E    
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P+   FSI+I    ++ +  +A   F  ++ +   PD + Y  ++   C+
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + +A R F +M    + P    Y+ +I +LC   +  +A ++  EML+ G   ++I 
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+++  H K  R  +  ++++ M R+G + D ITY+ LID +C  GK+++A K+L SMV
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+N +     K+  +  A  ++ +M+     P+ +TYNI++Q    ++ T 
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVY 501
              +L   + E+  +  ++TY I++   C     NN       M +  C   L+  +  +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLC----KNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++  L + G+  + ++L   +   G 
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGL 685



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 166/380 (43%), Gaps = 40/380 (10%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      FSIL+  Y + G   +A+  F++M + G  PD + +  VI ILC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 230 RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRG------W-------------------- 262
           +  R  +A  +F+ + D +  P  IVY +L+        W                    
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 263 ---------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                    C+ G + E+E++F  M   G++P++ TYS +ID  C  G++  A  + A M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + VG +P+ +T+N L+  + K SR E  L ++ +M+  G   D ITYN ++    +  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK--MKDLKCEPNTVTYN 431
             A ++   +   G     ST+N+I   + K    + A RM+    + DL+ E  T T+N
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE--TRTFN 658

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           I++         D    L   +  N + P+V TY ++       G           M E 
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718

Query: 492 KCLKPGSSVYEMVLQQLRRA 511
            C      +  +V + L+R 
Sbjct: 719 GCTANSRMLNSIVRKLLQRG 738



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++ ++  + + G   +A   ++ M + G  P+ + +S +I+ LC+ +   +A     
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           S+ K+   P+   Y ++V G+C +G   EA    ++M   G++P+V TY+ ++D LC+ G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G +P   T+  L++ +       ++  + + M R G   +   ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K GK++ A+ V + M ++G NP+  T+  +   + K G V  A R + +M D 
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P  + YN L+         D   +L  EM +  +  +   +  +I  +C  G    +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            K    M+    +KP    Y  ++     AG++ +  +L+  MV  G 
Sbjct: 499 EKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 148/314 (47%), Gaps = 3/314 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M + G   D I F+ +I   C++ R  E++  FD + +   +PD+I Y+ L+ G+C AG 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++   M   G++P+  TY+ +I+  C+  ++  A  +F EM   G  P+ IT+N 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++   +  RT    ++Y  +   G + +  TYN ++   CK+   ++A+++  ++    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                 TFN++   + K+G  + A  ++  +      P+  TY+++ +        + + 
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L   MEEN    N      ++      G    A  Y+  MI+EK     +S   + L  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDL 768

Query: 508 LRRAGQLQKHEELV 521
           L   G+ Q++   +
Sbjct: 769 L-SGGKYQEYHSCI 781



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 7/302 (2%)

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG---IQPNVYTY 290
           A +A+  FD L  +     I   N         + + A   +  M  AG   + PN+ TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I+I + C  G++         +++ G   ++I F  L++      RT   +  V  +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRCISKLGD 407
           +LGC  +  +YN L+   C + + ++A+++L  M   G  C P+  ++  +     K GD
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A+  Y +M D    PN VTY+ ++     +++ D  +++   M +N V PN  TY  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++  YC  G    A  ++++M  +  ++P    Y  ++  L + G+  +  ++ + M  R
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 528 GF 529
           G 
Sbjct: 334 GL 335


>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
 gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
          Length = 535

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 184/360 (51%), Gaps = 5/360 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSI 188
            L+FFNW    P + H    Y EM+++ G++++        D +  + R V +T   F++
Sbjct: 127 ALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAV 186

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+ RY  A    EA+  F   ++YG   D + F I++  LCR +   EA++ F   KD+F
Sbjct: 187 LLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEF 246

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
                 +  ++ GWC  G++ +A+R++ ++  + ++ +++T+   I+AL + G+I+ A  
Sbjct: 247 PHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVK 306

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F +M E G  P+    N ++       +  + L+++ +M    C+AD  TYN LI   C
Sbjct: 307 LFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMC 366

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  ++E   ++L+ M  KGC+PN  T++ I +   K  DV     +  +M+   C+ ++ 
Sbjct: 367 KIKRMEKVYELLDDMEAKGCSPNNRTYSYILKTTEKPKDVIA---LMQRMERSGCKLDSD 423

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YN+++ ++   K    + ++  EME     P+  ++ I++      G  + A +Y   M
Sbjct: 424 MYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTM 483



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 39/248 (15%)

Query: 141 RPEFVHSPDLYHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           + EF H    ++ ++N   + G +R     W+  D++ S+ VE  + TF   +    + G
Sbjct: 243 KDEFPHVTKSWNIILNGWCVKGSLRDAQRIWN--DIIASK-VERDLFTFGTFINALAKNG 299

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYT 256
             + AV  F +M E G  PD    + +I  LC K++  EA   F  + D+  + DV  Y 
Sbjct: 300 RISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYN 359

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI-------DALCRCGQITRA--- 306
            L++  C+   + +   +  +M+  G  PN  TYS ++       D +    ++ R+   
Sbjct: 360 TLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYILKTTEKPKDVIALMQRMERSGCK 419

Query: 307 ----------------------HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                                   ++ EM   G  P+  +F  ++       + ++ LQ 
Sbjct: 420 LDSDMYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQY 479

Query: 345 YNQMKRLG 352
           Y  MK  G
Sbjct: 480 YTTMKSRG 487



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 107/246 (43%), Gaps = 12/246 (4%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN-----LMRVHVKASRTEKVLQ 343
            Y+ ++D L R  ++     +F E+ E   E   +   N     L+  +  A + ++ ++
Sbjct: 146 AYTEMLDILGRMKKVRHMRQLFDEIPE---ERRQVVVTNKMFAVLLNRYAGAHKVQEAIE 202

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS-TFNMIFRCI 402
           V+   K  G E D + +  L+   C+   +E+A  +     +K   P+ + ++N+I    
Sbjct: 203 VFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFRE--KKDEFPHVTKSWNIILNGW 260

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
              G +  A R++  +   K E +  T+   +   A +      +KL K+M E  + P+V
Sbjct: 261 CVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDV 320

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
                +I   C       A +   EM +  C +   + Y  +++ + +  +++K  EL++
Sbjct: 321 AICNCIIDQLCFKKKIPEALEIFGEMNDRLC-QADVATYNTLIKYMCKIKRMEKVYELLD 379

Query: 523 KMVDRG 528
            M  +G
Sbjct: 380 DMEAKG 385


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 203/415 (48%), Gaps = 18/415 (4%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVDTF 186
           + L FF WV A+  F H+   Y  MI + G+ R  + A +F+  ++ ++   V++    F
Sbjct: 110 KALHFFRWVEAKG-FTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFF 168

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+R Y  AGL  E++  F  M+E G +P  + F+ ++SI+ ++ R S A+  FD + D
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228

Query: 247 KF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            +   PD   +  L+RG+C    + E    F+EM      P+V TY+ ++D LCR G++ 
Sbjct: 229 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 288

Query: 305 RAHDVFAEMLEVG--CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
            AH+V   M++      PN +T+  L+R +       + L +  +M   G + + ITYN 
Sbjct: 289 IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 348

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCN-PNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           LI   C+  KL+   ++L  MV  G   P+  T N + +    +G +  A  ++ KM +L
Sbjct: 349 LIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL 408

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-------EPNVNTYRILITMYCG 474
           + +P++ TY++L++            +   E+ E E+       +P V  Y  +    C 
Sbjct: 409 RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCS 468

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G    A +  R++++     P S  Y+ ++    R G  +   +L+  M+ R F
Sbjct: 469 NGKTKKAERVFRQLMKRGTQDPPS--YKTLILGHCREGTPEAGFDLLVLMLRRDF 521



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 178/336 (52%), Gaps = 9/336 (2%)

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV----Y 255
           A+A+H F  +E  G   ++ ++ ++I IL R R  + A++F  S++ K    V +    +
Sbjct: 109 AKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFF 168

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +L+R +  AG   E+ +VF+ MK  G+ P+V T++ ++  + + G+ + A  +F EML+
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228

Query: 316 V-GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  P++ TFN L+R     S  ++    + +M R  C+ D +TYN L+D  C+ GK++
Sbjct: 229 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 288

Query: 375 DAIKVLNSMVRKGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            A  V+  MV+K  N  PN  T+  + R      D+  A  +  +M     +PN +TYN 
Sbjct: 289 IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 348

Query: 433 LMQMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           L+Q    ++  D + ++ + M  +    P+  T   LI  +C MG    A+    +M E 
Sbjct: 349 LIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL 408

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           + ++P S+ Y ++++ L + G  ++ EE  +++ ++
Sbjct: 409 R-VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEK 443



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 153/331 (46%), Gaps = 19/331 (5%)

Query: 158 AGKVRQFDLAWHFIDLM--KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           AGKV+   +A + +  M  KS N+   V T++ L+R Y      AEA+     M   G  
Sbjct: 284 AGKVK---IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLK 340

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAER 273
           P+KI ++ +I  LC  ++  + +   + +     F PD      L++  C  G + EA  
Sbjct: 341 PNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFS 400

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE-------VGCEPNSITFN 326
           VF +M    +QP+  TYS+++ +LC+ G   RA + F E+ E       VGC+P    +N
Sbjct: 401 VFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYN 460

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +        +T+K  +V+ Q+ + G + D  +Y  LI  HC++G  E    +L  M+R+
Sbjct: 461 PMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRR 519

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
              P+A T+ ++   + K GD   AH+   KM      P T  ++ ++            
Sbjct: 520 DFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHES 579

Query: 447 LKLKKEMEENEVEPNVN----TYRILITMYC 473
             L K M E  +  N++    T   L++  C
Sbjct: 580 ASLVKLMLERRIRQNIDLSTHTMEELVSFLC 610


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 191/414 (46%), Gaps = 6/414 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           VI   C V       QVL+        P+ V     Y+ MI      R+  LA   +D +
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVT----YNIMIGSLCNRRKLGLALKVLDQL 198

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
              N   TV T++IL+   +  G   EA+     M   G  PD   ++ +I  +C++   
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             A     SL  K  +PDVI Y  L+R +   G   E E++  EM   G +PN  TYSI+
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I +LCR G+I  A  V   M+E    P++ +++ L+    K  R +  + + + M   GC
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D + YN ++   CK+G    A+++ N +   GC PN S++N +   +   GD + A  
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           M   M     +P+ +TYN L+         +  + L  +ME++   P V +Y I++   C
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            +   ++A     EMIE+ C +P  + Y ++++ +  AG   +  EL   +  R
Sbjct: 499 KVRRIDDAIGMFAEMIEKGC-RPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 161/345 (46%), Gaps = 3/345 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+ R  +AG   E+++    +   G  PD I  + +I      +   +A    + L+   
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           EPDV  Y  ++ G+C+   I  A +V   MK  G  P++ TY+I+I +LC   ++  A  
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  ++L   C P  IT+  L+   +      + +++  +M   G   D  TYN +I   C
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G +E A +++ S+  KGC P+  ++N++ R     G  +   ++  +M    CEPN V
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY+IL+         D  + + K M E E+ P+  +Y  LI+  C  G  + A   +  M
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           I   CL P    Y  +L  L + G   +  E+  K+  RG    P
Sbjct: 374 ISNGCL-PDIVNYNTILAALCKNGNANQALEIFNKL--RGMGCPP 415



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 179/394 (45%), Gaps = 7/394 (1%)

Query: 140 ARPEFVHSPDLYH----EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           ARP  + S D       +++N + K  +F+ + +F++ + ++     V   + L++ +  
Sbjct: 56  ARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFN 115

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIV 254
                +A      +E +   PD  A++ VIS  C+  R   A    + +K + F PD++ 
Sbjct: 116 FKNIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVT 174

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           Y  ++   C    +  A +V  ++ +    P V TY+I+I+A    G I  A  +  EML
Sbjct: 175 YNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEML 234

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  P+  T+N ++R   K    E+  ++   +   GC+ D I+YN L+      GK +
Sbjct: 235 ARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWD 294

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +  K++  M  +GC PN  T++++   + + G ++ A  +   M + +  P+T +Y+ L+
Sbjct: 295 EGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLI 354

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                    D+ + +   M  N   P++  Y  ++   C  G+ N A +   ++    C 
Sbjct: 355 SALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGC- 413

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            P  S Y  ++  L   G   +   +V  M+ +G
Sbjct: 414 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 190/365 (52%), Gaps = 5/365 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V +   A   +D M     +  + T + LV     +G  AEA+   ++M EYGC P
Sbjct: 170 LEGRVSE---ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + +  V++++C+  + + A      ++++  + D + Y+ ++ G C+ G++  A  +F
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM+M GI  N+ TY+I+I   C  G+      +  +M++    PN +TF+ L+   VK 
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 346

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            +  +  +++ +M   G   DTITY  LID  CK+  L+ A ++++ MV KGC+PN  TF
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N++     K   ++    ++ KM       +TVTYN L+Q F      ++  +L +EM  
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
            +V PN+ TY+IL+   C  G    A + I E IE+  ++    +Y +++  +  A ++ 
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALE-IFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525

Query: 516 KHEEL 520
              +L
Sbjct: 526 DAWDL 530



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 188/382 (49%), Gaps = 2/382 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N+  K  Q  LA   +  M+ RN+++    +SI++    + G    A + FN ME
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G   + I ++I+I   C   R  +      D +K K  P+V+ ++ L+  + + G + 
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE + +EM   GI P+  TY+ +ID  C+   + +A+ +   M+  GC+PN  TFN L+
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA+R +  L+++ +M   G  ADT+TYN LI   C+ GKL  A ++   MV +   
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+ ++   +   G+   A  ++ K++  K E +   YNI++     +   D    L
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+P V TY I+I   C  G  + A    R+M EE    P    Y ++++   
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM-EEDGHAPDGWTYNILIRAHL 589

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
             G   K  +L+E++   GF+ 
Sbjct: 590 GDGDATKSVKLIEELKRCGFSV 611



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 187/391 (47%), Gaps = 7/391 (1%)

Query: 143 EFVHSPDL-----YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           + +HS  L     +  + +   K +Q+DL       M+ + +   + T SI++  + R  
Sbjct: 78  DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 137

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYT 256
               A  A  ++ + G  P+ I FS +I+ LC + R SEA    D + +   +PD+I   
Sbjct: 138 KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN 197

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            LV G C +G  +EA  +  +M   G QPN  TY  V++ +C+ GQ   A ++  +M E 
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
             + +++ ++ ++    K    +    ++N+M+  G   + ITYN LI   C  G+ +D 
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            K+L  M+++  NPN  TF+++     K G +  A  ++ +M      P+T+TY  L+  
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           F      D   ++   M     +PN+ T+ ILI  YC     ++  +  R+M   + +  
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVA 436

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            +  Y  ++Q     G+L   +EL ++MV R
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 157/299 (52%), Gaps = 2/299 (0%)

Query: 233 RASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           +A +A   F D +  +  P VI ++ L     +         + ++M++ GI  N+YT S
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           I+I+  CRC ++  A     +++++G EPN+ITF+ L+       R  + L++ ++M  +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G + D IT N L++  C  GK  +A+ +++ MV  GC PNA T+  +   + K G    A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  KM++   + + V Y+I++       S D    L  EME   +  N+ TY ILI  
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +C  G W++  K +R+MI+ K + P    + +++    + G+L++ EEL ++M+ RG  
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 3/363 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F D++ SR +   +D FS L     +       +    +ME  G A +    SI+I+  C
Sbjct: 76  FRDMIHSRPLPTVID-FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R R+   A S    + K  +EP+ I ++ L+ G C  G +SEA  +   M   G +P++ 
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T + +++ LC  G+   A  +  +M+E GC+PN++T+  ++ V  K+ +T   +++  +M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           +    + D + Y+ +ID  CK G L++A  + N M  KG   N  T+N++       G  
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           +   ++   M   K  PN VT+++L+  F          +L KEM    + P+  TY  L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +C   H + A + +  M+ + C  P    + +++    +A ++    EL  KM  RG
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGC-DPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433

Query: 529 FTA 531
             A
Sbjct: 434 VVA 436



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 158/322 (49%), Gaps = 1/322 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I       ++D     +  M  R +   V TFS+L+  +V+ G   EA      M 
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G APD I ++ +I   C++    +A    D +  K  +P++  +  L+ G+C+A  I 
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +   +FR+M + G+  +  TY+ +I   C  G++  A ++F EM+     PN +T+  L+
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                   +EK L+++ ++++   E D   YN +I   C   K++DA  +  S+  KG  
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+N++   + K G ++ A  ++ KM++    P+  TYNIL++           +KL
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600

Query: 450 KKEMEENEVEPNVNTYRILITM 471
            +E++      + +T +++I M
Sbjct: 601 IEELKRCGFSVDASTIKMVIDM 622



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 47/96 (48%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+      + D AW     +  + V+  V T++I++    + G  +EA   F +M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           EE G APD   ++I+I        A+++    + LK
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605


>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
 gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
          Length = 541

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 30/437 (6%)

Query: 74  NPNPSSNSNPSLNPD-------------FTIPSLSLGFSQISTAHSISPSTVRHVIEKSC 120
            P+P     P L+PD             F  P   L  +    A  ++P+    V+ +  
Sbjct: 32  QPDPRPYPVPELDPDPQLVGALCRVLSDFRGPRHDLRAALDGFAPRLTPAAAADVLRRC- 90

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV---RQFDLAWHFI-DLMKS 176
                +P+   L FF +  A P F H P+    ++ LAG +   R F L    + DL + 
Sbjct: 91  ---RNLPV-PSLRFFLFAAALPGFTHLPE---SLLILAGSLAGARLFPLLRSLLSDLPRP 143

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
               ++ D F +L R Y RAGL  +A+ AF+ ME +G  P       ++  L        
Sbjct: 144 ---ALSRDLFPLLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEH 200

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           A++FF     +F+     YT L+ GW       +A+++F EM   G+QP+V  Y+ +IDA
Sbjct: 201 AEAFFRESPIQFDVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDA 260

Query: 297 LCRCGQITRAHDVFAEMLEV-GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           LCR G +  A +   +M    G  P++ T+   +R    +      L+V ++M+      
Sbjct: 261 LCRGGDVALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTP 320

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           +  TYN +I   C+ G++++A  +LN M   G  P+  ++N +     KL +VN A R+ 
Sbjct: 321 NVFTYNAVIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLI 380

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI-TMYCG 474
            +M +  C PN  +YN++++M       D  +++   ME+    P   TY ++I  + C 
Sbjct: 381 SRMDEGLCLPNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCK 440

Query: 475 MGHWNNAYKYIREMIEE 491
            G    A  Y   M+++
Sbjct: 441 KGRAEEACSYFLRMVDD 457



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 9/259 (3%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           +++  T++IL+  +       +A   F+ M E G  PD  A++ +I  LCR    + AQ 
Sbjct: 213 DVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQ- 271

Query: 240 FFDSLKD-----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
             + LKD        PD   Y   +R  C + +   A RV   M+   + PNV+TY+ VI
Sbjct: 272 --EQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVI 329

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
             LC  G++  A+++  EM   G +P+  ++N L+  H K     K L++ ++M    C 
Sbjct: 330 RLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCL 389

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS-KLGDVNGAHR 413
            +  +YN ++      G+++ AI+V + M ++G +P A+T+ ++   +S K G    A  
Sbjct: 390 PNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACS 449

Query: 414 MYGKMKDLKCEPNTVTYNI 432
            + +M D    P   T  +
Sbjct: 450 YFLRMVDDGIPPYQATCQV 468



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 3/277 (1%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           ++  L R + RAG   +A R F  M+  G  P V     ++  L   G +  A   F E 
Sbjct: 149 LFPLLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRES 208

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
             +  + ++ T+  L+      ++ EK  +++++M   G + D   YN LID  C+ G +
Sbjct: 209 -PIQFDVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDV 267

Query: 374 EDAIKVLNSMVR-KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             A + L  M R +G  P+A+T+    R      D   A R+  +M+     PN  TYN 
Sbjct: 268 ALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNA 327

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           ++++       D    +  EM     +P+V +Y  L+  +C +   N A + I  M E  
Sbjct: 328 VIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGL 387

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           CL P    Y M+L+ L   G++ +  E+ + M  RGF
Sbjct: 388 CL-PNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGF 423



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 1/171 (0%)

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +  L   + + G  +DAI+  +SM R G  P  +  + +   +S  G V  A   + +  
Sbjct: 150 FPLLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFF-RES 208

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
            ++ + +  TY IL+  +A     +   KL  EM E  V+P+V  Y  LI   C  G   
Sbjct: 209 PIQFDVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVA 268

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            A + +++M   + L P ++ Y   L+    +   +    ++++M  R  T
Sbjct: 269 LAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLT 319


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 195/416 (46%), Gaps = 37/416 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++    K R+FD A      M   +V   V +F+IL+  + R G   EAV  +  M+
Sbjct: 230 YNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQ 289

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
                PD ++FS +I +  R+     A ++   +K     PD ++YT ++ G+CRAG++S
Sbjct: 290 HRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMS 349

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA RV  EM   G  P+V TY+ +++ LC+  ++  A  +  EM E G  P+  TF  L+
Sbjct: 350 EALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLI 409

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYN---------------------------- 361
             + +    E  LQ+++ + R     D +TYN                            
Sbjct: 410 HGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREIL 469

Query: 362 -------FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                   LID HC+ G++EDA   L+ MV+KG  PN  T+N I +   + G+V    + 
Sbjct: 470 PNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQF 529

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             KM+     P+ +T+N L+  +   ++      +   ME+  V P+  TY ++I  +  
Sbjct: 530 LQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSE 589

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            G+  +A +  + M  +  ++P    Y  ++     AG  ++  +L ++M+ RGF 
Sbjct: 590 QGNMQDAGRVFKGM-GDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFA 644



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 186/372 (50%), Gaps = 2/372 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M++   K  +FD A   I  M+ R V   V T ++L+    RAG    A+   + M   G
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
             P  + ++ V+  LC+ RR  +A+  F ++      PDV  +  L+ G+CR G + EA 
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           + ++EM+   + P+V ++S +I    R G++  A     EM  +G  P+ + +  ++   
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +A    + L+V ++M   GC  D +TYN L++  CK  +L DA K+LN M  +G  P+ 
Sbjct: 343 CRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDL 402

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  +     + G+   A +++  +   +  P+ VTYN L+             +L  +
Sbjct: 403 CTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDD 462

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M   E+ PN  TY ILI  +C  G   +A+ ++ EM+++  L P    Y  +++   R+G
Sbjct: 463 MHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL-PNIRTYNSIIKGYCRSG 521

Query: 513 QLQKHEELVEKM 524
            ++K ++ ++KM
Sbjct: 522 NVKKGQQFLQKM 533



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 194/418 (46%), Gaps = 37/418 (8%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ +I+   +    D A   +D M +R ++  + T++ +++   +     +A   
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCR 264
           F  M++   APD  +F+I+I   CR     EA  F+  ++ ++  PDV+ ++ L+  + R
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A    REMK  G+ P+   Y++VI   CR G ++ A  V  EM+  GC P+ +T
Sbjct: 310 RGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K  R     ++ N+M+  G   D  T+  LI  +C+ G  E+A+++ ++++
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           R+   P+  T+N +   + + GD+  A+ ++  M   +  PN +TY+IL+         +
Sbjct: 430 RQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVE 489

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM---------------- 488
                  EM +    PN+ TY  +I  YC  G+     +++++M                
Sbjct: 490 DAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLI 549

Query: 489 ------------------IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                             +E++ ++P +  Y M++      G +Q    + + M D G
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSG 607



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 144/280 (51%), Gaps = 1/280 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ L+    +     +A    N MEE G  PD   F+ +I   CR+     A   FD
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +L + +  PDV+ Y +L+ G CR G++++A  ++ +M    I PN  TYSI+ID+ C  G
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           Q+  A     EM++ G  PN  T+N++++ + ++   +K  Q   +M++     D IT+N
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFN 546

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K+  +  A  V N M ++   P+A T+NMI    S+ G++  A R++  M D 
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDS 606

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             EP+  TY  L+    T+ ++    +L  EM      P+
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 2/316 (0%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTN-LVRGWCRAGNISEAERV 274
           P    F ++I    + R+  EA   F  L D   P     +N L+    RAG    A+  
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           +R +  +  + N YT +I++ + C+  +   A  V +EM +    P+ +T N L+    +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A   +  + + + M   G +   +TYN ++   CK  + + A +V  +M +    P+  +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           FN++     ++G+V  A + Y +M+     P+ V+++ L+ +F+     D      +EM+
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              + P+   Y ++I  +C  G  + A +   EM+   CL P    Y  +L  L +  +L
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL-PDVVTYNTLLNGLCKQHRL 383

Query: 515 QKHEELVEKMVDRGFT 530
              E+L+ +M +RG T
Sbjct: 384 LDAEKLLNEMEERGVT 399


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 195/397 (49%), Gaps = 2/397 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF WV  +   V S      ++ + G  R+F+ A   +  ++     +    F  L R Y
Sbjct: 5   FFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGY 64

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDV 252
             AGL  ++V A  RME + CA    A++ +I    +     +A + +  + +    PD 
Sbjct: 65  ASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDT 124

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +  L+  + +A  +    ++F EM+     PNV TYSI+IDA+C+CG + +A  VF +
Sbjct: 125 YTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLD 184

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   GC PN  T+ +++    K+   +K   ++ +M   G  A  + YN LI    + G+
Sbjct: 185 MKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGR 244

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            + A K+   M+ KG  P+  TF  +   +   G  + A R++ + +D+ C  +   YN+
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+     SK  D   ++  E+EE+ + P+V T+  L+   C  G  ++A+  + +M    
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C  P  +VY  ++  LR++G++++  +L+ +M   G+
Sbjct: 365 C-TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGY 400



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD Y  + ++N   K ++ D  W   + M+++N    V T+SIL+    + G   +A+  
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKV 181

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           F  M+  GC P+   ++ +I  L +     +A   F+ +  +      +VY +L+ G  R
Sbjct: 182 FLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGR 241

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G    A ++FREM   G+QP+  T++ ++  L   G+ + A  +F E  +VGC  +   
Sbjct: 242 SGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNL 301

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K+ R ++  +++ +++  G   D  T+N L+D  CK G++ DA  +L  M 
Sbjct: 302 YNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMK 361

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           R GC P+ + +N +   + K G V  A ++  +M+ L  EP+ VTYN L+         +
Sbjct: 362 RAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIE 421

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK---CLKPGSSVY 501
             L+L +E+       N  TY  ++   C  G  + AYK    M +E     + P    Y
Sbjct: 422 DALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTY 480

Query: 502 EMVLQQLRRAG 512
             +L   R+AG
Sbjct: 481 TTLLNGARQAG 491



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 188/420 (44%), Gaps = 38/420 (9%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +  ++  P ++ E+          + +   +  M+     +T   ++ L+  +V+AG   
Sbjct: 47  KSRYILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQ 106

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A+  +  M + G  PD   F+++++   + +R       F+ ++++   P+VI Y+ L+
Sbjct: 107 KALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILI 166

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH------------ 307
              C+ G + +A +VF +MK  G +PN++TY+ +ID L + G + +A             
Sbjct: 167 DAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV 226

Query: 308 -----------------------DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                                   +F EML  G +P+ +TF +L+     A R  +  ++
Sbjct: 227 ATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI 286

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + + + +GC  D   YN LID  CK  +L++A ++   +   G  P+  TFN +   + K
Sbjct: 287 FQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCK 346

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G ++ A  + G MK   C P+   YN L+     S   +   +L  EM+    EP+V T
Sbjct: 347 SGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVT 406

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI   C  G   +A +   E I  K     +  Y  +L  L  AG++ +  +L   M
Sbjct: 407 YNTLIDESCKGGRIEDALRLFEE-ISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGM 464


>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 203/415 (48%), Gaps = 18/415 (4%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVDTF 186
           + L FF WV A+  F H+   Y  MI + G+ R  + A +F+  ++ ++   V++    F
Sbjct: 110 KALHFFRWVEAKG-FTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFF 168

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+R Y  AGL  E++  F  M+E G +P  + F+ ++SI+ ++ R S A+  FD + D
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228

Query: 247 KF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            +   PD   +  L+RG+C    + E    F+EM      P+V TY+ ++D LCR G++ 
Sbjct: 229 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 288

Query: 305 RAHDVFAEMLEVG--CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
            AH+V   M++      PN +T+  L+R +       + L +  +M   G + + ITYN 
Sbjct: 289 IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 348

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCN-PNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           LI   C+  KL+   ++L  MV  G   P+  T N + +    +G +  A  ++ KM +L
Sbjct: 349 LIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL 408

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-------EPNVNTYRILITMYCG 474
           + +P++ TY++L++            +   E+ E E+       +P V  Y  +    C 
Sbjct: 409 RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCS 468

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G    A +  R++++     P S  Y+ ++    R G  +   +L+  M+ R F
Sbjct: 469 NGKTKKAERVFRQLMKRGTQDPPS--YKTLILGHCREGTPEAGFDLLVLMLRRDF 521



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 178/336 (52%), Gaps = 9/336 (2%)

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV----Y 255
           A+A+H F  +E  G   ++ ++ ++I IL R R  + A++F  S++ K    V +    +
Sbjct: 109 AKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFF 168

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +L+R +  AG   E+ +VF+ MK  G+ P+V T++ ++  + + G+ + A  +F EML+
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228

Query: 316 V-GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  P++ TFN L+R     S  ++    + +M R  C+ D +TYN L+D  C+ GK++
Sbjct: 229 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 288

Query: 375 DAIKVLNSMVRKGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            A  V+  MV+K  N  PN  T+  + R      D+  A  +  +M     +PN +TYN 
Sbjct: 289 IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 348

Query: 433 LMQMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           L+Q    ++  D + ++ + M  +    P+  T   LI  +C MG    A+    +M E 
Sbjct: 349 LIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL 408

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           + ++P S+ Y ++++ L + G  ++ EE  +++ ++
Sbjct: 409 R-VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEK 443



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 157/344 (45%), Gaps = 15/344 (4%)

Query: 158 AGKVRQFDLAWHFIDLM--KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           AGKV+   +A + +  M  KS N+   V T++ L+R Y      AEA+     M   G  
Sbjct: 284 AGKVK---IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLK 340

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAER 273
           P+KI ++ +I  LC  ++  + +   + +     F PD      L++  C  G + EA  
Sbjct: 341 PNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFS 400

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE-------VGCEPNSITFN 326
           VF +M    +QP+  TYS+++ +LC+ G   RA + F E+ E       VGC+P    +N
Sbjct: 401 VFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYN 460

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +        +T+K  +V+ Q+ + G + D  +Y  LI  HC++G  E    +L  M+R+
Sbjct: 461 PMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRR 519

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
              P+A T+ ++   + K GD   AH+   KM      P T  ++ ++            
Sbjct: 520 DFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHES 579

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             L K M E  +  N++     + +    G  + A+  I  + E
Sbjct: 580 ASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYE 623



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 4/148 (2%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            + LM  R +   +D  +  VR   ++GL  +A      + E G     +    ++S LC
Sbjct: 582 LVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYL---VKMEELVSFLC 638

Query: 230 RKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + R+  EAQ     SL+ +   D+ + + ++ G C+A  +SEA  ++ E+   G+Q  + 
Sbjct: 639 QSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLT 698

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEV 316
               +  +L   G++  A  V  +M EV
Sbjct: 699 CQEDLRISLEAEGRLNEAKFVSKKMPEV 726


>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 211/446 (47%), Gaps = 16/446 (3%)

Query: 77  PSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQ------ 130
           PS       + DF I  + +G S+     S+    V + I+ S  + +   LLQ      
Sbjct: 61  PSEFQKKKSDIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVY--KLLQRFKDDW 118

Query: 131 --VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
              L  F W  +   F H+PDLY  +I+  GK +Q       ++ MK   + +T+DT + 
Sbjct: 119 KSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARL-VTLDTVAK 177

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
            +RR+  AG    AV  F+ +E YG   +  + ++++  LC++++  +A+  +  LK   
Sbjct: 178 AMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSHI 237

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P+   +   + GWC+   I EA     EMK  G +P V +YS +I   C      + ++
Sbjct: 238 APNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYE 297

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM   GC  N IT+  +M    K+   E+ LQ+  +MK  G E DT+ YN LI    
Sbjct: 298 LLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLG 357

Query: 369 KDGKLEDAIKVLN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPN 426
           + GK+ +AI V    M  K   PN ST+N +     +      A ++  +M K   C+P+
Sbjct: 358 RAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPD 417

Query: 427 TVTYNILMQMFATSKSTDMVLK--LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
             TY  L++    +  TD  L   L + + ++ +  +++TY +LI   C     + AY+ 
Sbjct: 418 VQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQL 477

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRR 510
             +MI +  +KP     +++L + ++
Sbjct: 478 FEKMISQD-IKPRYLTCQLLLDEFKQ 502


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 212/432 (49%), Gaps = 37/432 (8%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +S+FN +  +  FV   + ++ ++        F+  W F +  K + V++ V +F I+++
Sbjct: 114 ISYFNEMVDKG-FVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK-VDLDVYSFGIVIK 171

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEP 250
               AG   ++      + E+G +P+ + ++ +I   C++    +A+  FF+  K     
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVA 231

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   YT L+ G  + G   +   ++ +M+  G+ PN+YTY+ V++  C+ G+   A  +F
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLF 291

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM E G   N +T+N L+    +  +  +  +V +QMK  G   + ITYN LID  C  
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           GKL  A+ +   +  +G +P+  T+N++     K GD +GA ++  +M++   +P+ +TY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY 411

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI- 489
            IL+  FA   + +  ++L+  MEE  + P+V+TY +LI  +C  G  N A +  + M+ 
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVA 471

Query: 490 ---------------------------------EEKCLKPGSSVYEMVLQQLRRAGQLQK 516
                                            EEK L P  + Y  +++ L +  + ++
Sbjct: 472 KKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531

Query: 517 HEELVEKMVDRG 528
            E LVEKM+D G
Sbjct: 532 AEGLVEKMIDTG 543



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 198/389 (50%), Gaps = 5/389 (1%)

Query: 144 FVHSPDLYHEMINLAGKVR-QFDLAWHFID-LMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           + H+  L  ++I  +GK++ QF  +   +  + +S   E     + +++  YV++     
Sbjct: 55  YSHAQSLLLQVI--SGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDS 112

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           ++  FN M + G  P    F+ +++ +      ++   FF+  K K + DV  +  +++G
Sbjct: 113 SISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKG 172

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C AG I ++  +  E++  G  PNV  Y+ +ID  C+ G+I +A D+F EM + G   N
Sbjct: 173 CCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVAN 232

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  L+    K    ++  ++Y +M+  G   +  TYN +++ HCKDG+ +DA K+ +
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFD 292

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M  +G + N  T+N +   + +    N A+++  +MK     PN +TYN L+  F    
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVG 352

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                L L ++++   + P++ TY IL++ +C  G  + A K ++EM EE+ +KP    Y
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM-EERGIKPSKITY 411

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +++    R   ++K  +L   M + G T
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLT 440



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 183/373 (49%), Gaps = 4/373 (1%)

Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F+ +    EF  SP+  +Y  +I+   K  + + A      M    +     T+++L+  
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
             + G+  +    + +M+E G  P+   ++ V++  C+  R  +A   FD ++++    +
Sbjct: 243 LFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCN 302

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           ++ Y  L+ G CR    +EA +V  +MK  GI PN+ TY+ +ID  C  G++ +A  +  
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           ++   G  P+ +T+N L+    K   T    +V  +M+  G +   ITY  LID   +  
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMD 422

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            +E AI++ + M   G  P+  T++++       G +N A R++  M   K EPN V YN
Sbjct: 423 NMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            ++  +    S+   L+L +EMEE E+ PNV +YR +I + C       A   + +MI+ 
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT 542

Query: 492 KCLKPGSSVYEMV 504
             + P  S+  ++
Sbjct: 543 G-IDPSDSILNLI 554



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 122/231 (52%), Gaps = 1/231 (0%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +D MKS  +   + T++ L+  +   G   +A+     ++  G +P  + ++I++S  C+
Sbjct: 326 MDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCK 385

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           K   S A      ++++  +P  I YT L+  + R  N+ +A ++   M+  G+ P+V+T
Sbjct: 386 KGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHT 445

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           YS++I   C  GQ+  A  +F  M+    EPN + +N ++  + K   + + L+++ +M+
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREME 505

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
                 +  +Y ++I+  CK+ K ++A  ++  M+  G +P+ S  N+I R
Sbjct: 506 EKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISR 556


>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 213/463 (46%), Gaps = 15/463 (3%)

Query: 78  SSNSNPSLNPDFTIPSLSLGFSQI-----STAHSISPSTVRHVIEKSCGVRHGIPLLQVL 132
           SSN N  +   F I S +    Q+     S+   +S   +  V+ K     HG P  Q L
Sbjct: 27  SSNQNDDVQKVFGILSSTSTPEQLKQSLKSSGVFLSNDVIDQVL-KRVRFSHGNPS-QTL 84

Query: 133 SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF-IDLMKSRNVEITVDTFSILVR 191
            FF +   R  F HS      M+ + G+ R F   W   I+  +     IT  T  +++ 
Sbjct: 85  EFFRYTGRRKGFYHSSFSLDTMLYILGRSRMFGQVWELLIEARRKDQTAITARTVMVVLG 144

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           R  +     + V +F +  +     D   F+ ++  LC+++  ++A++ + SLK +F P+
Sbjct: 145 RIAKVCSVRQTVESFRKFRKLVQEFDTNCFNALLRTLCQEKSMADARNVYHSLKHRFRPN 204

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           +  +  L+ GW       +A+  F+EMK  G+ P+V TY+ ++D  C+  +I +A+ +  
Sbjct: 205 LQTFNILLSGW---KTPEDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLD 261

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM +    P+ IT+  ++       + +K   V  +MK  GC  D   YN  I   C   
Sbjct: 262 EMRDQDFSPDVITYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAK 321

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           +L DA  ++  MV KG +PNA+T+N+ FR      D+  +  MY +M    C PNT +  
Sbjct: 322 RLGDAHGLVEEMVTKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCM 381

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            L+++F   +  +M L+   +M E           +L  + C MG    A K   EM+ E
Sbjct: 382 FLIRLFRRHEKVEMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMV-E 440

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           K  KP    +  +   +  A + +  + L++KM   G   RPL
Sbjct: 441 KGQKPSHVSFRRIKVLMELANRHEALQSLMQKMAMFG---RPL 480


>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
 gi|194690592|gb|ACF79380.1| unknown [Zea mays]
 gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
          Length = 535

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 183/359 (50%), Gaps = 5/359 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSIL 189
           L+FFNW    P + H    Y EM+++ G++++        D +  + R V +T   F++L
Sbjct: 128 LAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVL 187

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           + RY  A    EA+  F   ++YG   D + F I++  LCR +   EA++ F   KD+F 
Sbjct: 188 LNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFP 247

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
                +  ++ GWC  G++ +A+R++ ++  + ++ +++T+   I+AL + G+I+ A  +
Sbjct: 248 HVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKL 307

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F +M E G  P+    N ++       +  + L+++ +M    C+AD  TYN LI   CK
Sbjct: 308 FKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCK 367

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             ++E   ++L+ M  KGC PN  T++ I +   K  DV     +  +M+   C+ ++  
Sbjct: 368 IKRMEKVYELLDDMEAKGCPPNNRTYSYILKTTEKPKDVIA---LMQRMERTGCKLDSDI 424

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           YN+++ ++   K    + ++  EME     P+  ++ I++      G  + A +Y   M
Sbjct: 425 YNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTM 483



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 107/246 (43%), Gaps = 12/246 (4%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN-----LMRVHVKASRTEKVLQ 343
            Y+ ++D L R  ++     +F E+ E   E   +   N     L+  +  A + ++ ++
Sbjct: 146 AYTEMLDILGRMKKVRHMRQLFDEIPE---ERRQVVVTNKMFAVLLNRYAGAHKVQEAIE 202

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS-TFNMIFRCI 402
           V+   K  G E D + +  L+   C+   +E+A  +     +K   P+ + ++N+I    
Sbjct: 203 VFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFRE--KKDEFPHVTKSWNIILNGW 260

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
              G +  A R++  +   K E +  T+   +   A +      +KL K+M E  + P+V
Sbjct: 261 CVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDV 320

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
                +I   C       A +   EM +  C +   + Y  +++ + +  +++K  EL++
Sbjct: 321 AICNCIIDQLCFKKKIPEALEIFGEMNDRLC-QADVATYNTLIKYMCKIKRMEKVYELLD 379

Query: 523 KMVDRG 528
            M  +G
Sbjct: 380 DMEAKG 385


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 234/482 (48%), Gaps = 35/482 (7%)

Query: 55  EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRH 114
           E TL  E+ H L+ +  R+         P L  D        GF     A + +PS    
Sbjct: 40  EGTLRPEEAHDLLDELQRR-------GTPVLERDLN------GFL---AAIARAPS---- 79

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHF 170
               S   R G P L V + FN   +R +   V SP    Y  +++   +  + +LA  F
Sbjct: 80  ----SAACRSG-PALAV-ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAF 133

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILC 229
              +    + + +   + L++ +  A    EA+    +R  E GC PD  ++SI++  LC
Sbjct: 134 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193

Query: 230 RKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            + ++ +A      + +      PDV+ Y  ++ G+ + G++++A  +F+EM   GI P+
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
             TYS V+ ALC+   + +A     +M+  G  PN+ T+NNL+  +    + ++ ++V+ 
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+R     D +T+N L+   CK GK+++A  V ++M  KG NP+  ++N++    +  G
Sbjct: 314 EMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +     ++  M      P   T+N+L++ +A     D  + +  EM ++ V+PNV TY 
Sbjct: 374 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYT 433

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C +G  ++A +   +MI++  + P    Y  ++Q     G L K +EL+ ++++
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492

Query: 527 RG 528
            G
Sbjct: 493 NG 494



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 184/390 (47%), Gaps = 6/390 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+FV    + H +     K R  D A  F+  M ++ V     T++ L+  Y   G   E
Sbjct: 252 PDFVTYSSVVHALC----KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVR 260
           AV  F  M      PD + F++++  LC+  +  EA+  FD++  K + PDV  Y  ++ 
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+   G + +   +F  M   GI P + T++++I A   CG + +A  +F EM + G +P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N +T+  ++    +  + +  ++ +NQM   G   D   Y+ LI   C  G L  A +++
Sbjct: 428 NVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + ++  G + +   F+ I   + KLG V  A  ++    ++   P  V Y++LM  +   
Sbjct: 488 SEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV 547

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +  L++   M    +EPN   Y  L+  YC +G  +      REM+ +K +KP + +
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML-QKGIKPSTIL 606

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           Y +++  L  AG+    +    +M + G  
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 194/388 (50%), Gaps = 8/388 (2%)

Query: 146 HSPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            +PD++   I L G   +  L       DLM    +   + TF++L++ Y   G+  +A+
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 414

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             FN M ++G  P+ + ++ VI+ LCR  +  +A   F+ + D+   PD   Y  L++G+
Sbjct: 415 IIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G++ +A+ +  E+   G+  ++  +S +I+ LC+ G++  A ++F   + VG  P +
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTA 534

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + ++ LM  +    + EK L+V++ M   G E + + Y  L++ +CK G++++ + +   
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++KG  P+   +N+I   + + G    A   + +M +     N  TY+I+++    ++ 
Sbjct: 595 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 654

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSV 500
            D  + L KE+    V+ ++ T   L TM  GM         K +   I    L P    
Sbjct: 655 FDEAIFLFKELRAMNVKIDIIT---LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 711

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y +++  L + G +++ E++   M + G
Sbjct: 712 YSIMITNLIKEGLVEEAEDMFSSMQNAG 739



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 2/295 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L+  +IN   K+ +   A +  DL  +  +  T   +S+L+  Y   G   +A+  F+ M
Sbjct: 501 LFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNI 268
              G  P+ + +  +++  C+  R  E  S F + L+   +P  I+Y  ++ G   AG  
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 620

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A+  F EM  +GI  N  TYSIV+  L +      A  +F E+  +  + + IT N +
Sbjct: 621 VPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 680

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +  R E+   ++  + R G     +TY+ +I    K+G +E+A  + +SM   GC
Sbjct: 681 IAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            P++   N + R + K  ++  A     K+ +       +T  +L+ +F +SK T
Sbjct: 741 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF-SSKGT 794



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  ++N   K+ + D        M  + ++ +   ++I++     AG    A   F+ M
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
            E G A +K  +SIV+  L + R   EA   F  L+    + D+I    ++ G  +   +
Sbjct: 631 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 690

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+ +F  +  +G+ P V TYSI+I  L + G +  A D+F+ M   GCEP+S   N++
Sbjct: 691 EEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV 750

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +R  +K +   +     +++       + +T   L+D     G   + I+ L
Sbjct: 751 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 175/345 (50%), Gaps = 2/345 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    ++M S+     V T++IL+    + G    AV   + MEE GCAP+ + +S ++ 
Sbjct: 335 ATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLH 394

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR     +A++  D +  K F  +   Y  ++    + G + EA R+ +EMK  G +P
Sbjct: 395 SFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKP 454

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++ TY+ +I  LC   Q+  A  +F  +LE G   N IT+N L+   + + R ++ L++ 
Sbjct: 455 DICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLA 514

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N+M   GC  D ++YN LI   CK+G ++ ++ +L  M+ KG  PN  ++NM+   + K 
Sbjct: 515 NEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKA 574

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V  A  +  +M +    P+ VTYN L+        T   L L +++    V P++ TY
Sbjct: 575 GKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTY 634

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            ILI+ +C +   ++A   + + +    + P    + M++Q   R
Sbjct: 635 NILISWHCKVRLLDDASMLLDKAVSGG-IVPNERTWGMMVQNFVR 678



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 190/389 (48%), Gaps = 8/389 (2%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+ V    + H ++   G       A   +D M        V+TF+ +V      G   E
Sbjct: 213 PDAVLYQTVIHALVAQGGVAE----AATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVRE 268

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           A    +RM  +GC P  + +  ++  LCR R+A EA +    +    E +V++   ++RG
Sbjct: 269 AARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP---EVNVVMLNTVIRG 325

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
               G ++ A  ++  M   G  P+V+TY+I++  LC+ G+   A  +  EM E GC PN
Sbjct: 326 CLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPN 385

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T++ L+    +    +    + +QM   G   ++  YN +I    KDGKL++A++++ 
Sbjct: 386 IVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQ 445

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M  +GC P+  T+N I   +     ++ A  ++G + +     N +TYN L+     S 
Sbjct: 446 EMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSG 505

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                L+L  EM  +    +V +Y  LI   C  G+ + +   + EM+  K +KP +  Y
Sbjct: 506 RWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMM-TKGIKPNNFSY 564

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            M++ +L +AG+++   EL ++M+++G T
Sbjct: 565 NMLINELCKAGKVRDALELSKEMLNQGLT 593



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 34/327 (10%)

Query: 235 SEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             A    D +  +F   P    Y  ++    RA   ++A  ++R M    + P  +T+ +
Sbjct: 126 GRALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 185

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
              ALCR G+   A  +   M   GC P+++ +  ++   V      +   + ++M  +G
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C AD  T+N ++   C  G + +A ++++ M+  GC P+  T+  + R + +    + A+
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305

Query: 413 RMYGKMKDLK-------------------------------CEPNTVTYNILMQMFATSK 441
            M G++ ++                                C P+  TYNILM       
Sbjct: 306 AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                +++  EMEE    PN+ TY  L+  +C  G W++A   + +M   K     S  Y
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM-SAKGFSMNSQGY 424

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
             ++  L + G+L +   LV++M  +G
Sbjct: 425 NGIIYALGKDGKLDEAMRLVQEMKSQG 451



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 69/150 (46%), Gaps = 1/150 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    K    D +   ++ M ++ ++    ++++L+    +AG   +A+     M 
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + ++ +I+ LC+      A +  + L ++   PD++ Y  L+   C+   + 
Sbjct: 589 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 648

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           +A  +  +    GI PN  T+ +++    R
Sbjct: 649 DASMLLDKAVSGGIVPNERTWGMMVQNFVR 678


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 184/379 (48%), Gaps = 5/379 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ M+       Q D A   +  M    VE    T++ L+R     G  A A+   + M 
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
              C PD + ++I++   C++    +A    D ++DK   PD++ Y  +V G C+ G + 
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A    + +   G +PN  +Y+IV+  LC   +   A ++  EM + GC PN +TFN L+
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +    E  L+V  Q+ + GC  ++++YN L+   CK  K++ A+  L+ MV +GC 
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  ++N +   + + G+V+ A  +  ++KD  C P  ++YN ++     +  T   L+L
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 299

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM    ++P++ TY  +    C      +A +   + +++  ++P + +Y  ++  L 
Sbjct: 300 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK-VQDMGIRPNTVLYNAIILGLC 358

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  +     +L   M+  G
Sbjct: 359 KRRETHSAIDLFAYMIGNG 377



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 191/379 (50%), Gaps = 4/379 (1%)

Query: 151 YHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ +I  L G+ R  + A   +D M  R     V T++IL+    +     +A+   + M
Sbjct: 35  YNTLIRGLCGRGRTAN-ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
            + GC PD + +++V++ +C++ R  +A  F  +L     EP+ + Y  +++G C A   
Sbjct: 94  RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 153

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +AE +  EM   G  PNV T++++I  LCR G +  A +V  ++ + GC PNS+++N L
Sbjct: 154 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 213

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K  + +K +   + M   GC  D ++YN L+   C+ G+++ A+++L+ +  KGC
Sbjct: 214 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 273

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   ++N +   ++K G    A  +  +M     +P+ +TY+ +          +  ++
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
              ++++  + PN   Y  +I   C     ++A      MI   C+ P  S Y ++++ L
Sbjct: 334 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM-PNESTYTILIEGL 392

Query: 509 RRAGQLQKHEELVEKMVDR 527
              G +++  +L++++  R
Sbjct: 393 AYEGLIKEARDLLDELCSR 411



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  ++    K   +  A   +D M+ +     + T++++V    + G   +A+  
Sbjct: 65  PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 124

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              +  YGC P+ ++++IV+  LC   R  +A+     +  K   P+V+ +  L+   CR
Sbjct: 125 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 184

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  V  ++   G  PN  +Y+ ++ A C+  ++ +A      M+  GC P+ ++
Sbjct: 185 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 244

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    ++   +  +++ +Q+K  GC    I+YN +ID   K GK ++A+++LN MV
Sbjct: 245 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P+  T++ I   + +   +  A R +GK++D+   PNTV YN ++      + T 
Sbjct: 305 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 364

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
             + L   M  N   PN +TY ILI    G+  +    K  R++++E C + G  +
Sbjct: 365 SAIDLFAYMIGNGCMPNESTYTILIE---GLA-YEGLIKEARDLLDELCSRAGEEI 416



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 4/103 (3%)

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           + YN ++  +  +   D   +L  EM    VEP+  TY  LI   CG G   NA   + E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           M+  +C+ P    Y ++L+   +    ++  +L+++M D+G T
Sbjct: 58  MLRRRCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT 99


>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
          Length = 572

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 194/403 (48%), Gaps = 36/403 (8%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L    W  +     HS D Y   +++ GK +++D    F++ M+   + +T++T + ++
Sbjct: 168 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIM 226

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RR+  AG   EAV  F+R+ E+G   +  + ++++  LC+++R  +A+     LK    P
Sbjct: 227 RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP 286

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   +   + GWC+A  + EA    +EMK  G +P V +Y+ +I   C+  +  + +++ 
Sbjct: 287 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 346

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           +EM   G  PNSIT+  +M         E+ L+V  +MKR GC+ D++ YN LI    + 
Sbjct: 347 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 406

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+LE+A +V                   FR                +M +L    NT TY
Sbjct: 407 GRLEEAERV-------------------FRV---------------EMPELGVSINTSTY 432

Query: 431 NILMQMFATSKSTDMVLKLKKEME-ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           N ++ M+      D  ++L KEME  N   P+V+TY+ L+      G      K ++EM+
Sbjct: 433 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 492

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
            +  L    S Y  ++Q+L RA   +    L E+M+ +  T R
Sbjct: 493 TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 535


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 13/407 (3%)

Query: 133 SFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           S F+ V    +F  +P L  Y+ +IN   K  + D A    + M  + +     T+SIL+
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFE 249
             + + G    A+H   +M E G       +S +IS  C+  +   A+S FD +  +  +
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+V++YT+L+ G+C+ G +  A R++ EM   GI PN YT++ +I  LC   ++  A+ +
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F EM+E    PN +T+N L+  H K   T +  ++ ++M   G   DT TY  LI   C 
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 370 DGKLEDAIKVLNSMVR--------KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            G++ +A + +N +          +GC PN  T+  +   + K+G ++ A  +  +M   
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS 637

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN  TY   +    +  + +  ++L   + E  +  N  TY ILI  +C +G    A
Sbjct: 638 NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL-ANTVTYNILIRGFCKLGRIQEA 696

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + +  MI+   + P    Y  ++ +  R G L++  +L E M++RG
Sbjct: 697 AEVLVNMIDSG-ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 742



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 176/364 (48%), Gaps = 12/364 (3%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           +L+  + +   V T+  LV    +           N M E+G  P + A S ++  L +K
Sbjct: 274 NLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKK 333

Query: 232 RRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                A    + +K KF   P + VY  L+   C+ G + EAE +F  M   G+ PN  T
Sbjct: 334 GNIGSAFDLVNKVK-KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVT 392

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           YSI+ID+ C+ G++  A     +M EVG +     +++L+  H K  +      ++++M 
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G + + + Y  LI  +CK+G+L +A ++ + M  KG +PN  TF  +   +     + 
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A++++G+M +    PN VTYN+L++      +T    +L  EM E  + P+  TYR LI
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 470 TMYCGMGHWNNAYKYIREMIEEK--------CLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           +  C  G  + A +++ ++  E+        CL P    Y  ++  L + G + K E L 
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCL-PNVVTYTALINGLCKIGLMDKAELLC 631

Query: 522 EKMV 525
            +M+
Sbjct: 632 REML 635



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 174/401 (43%), Gaps = 37/401 (9%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           ++RQF +A H  D + S  +   V  ++ +VR          A     RME  GC     
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA------------- 265
            +++ I  LC+ +R  EA    + L  K    DV  Y  LV G C+              
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 266 ----------------------GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                                 GNI  A  +  ++K  G+ P+++ Y+ +I+++C+ G++
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  M   G  PN +T++ L+    K  + +  L    +M  +G +A    Y+ L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I  HCK GKL  A  + + M+  G  PN   +  +     K G+++ A R+Y +M     
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PNT T+  L+     +       KL  EM E  V PN  TY +LI  +C  G+   A++
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            + EM+ EK L P +  Y  ++  L   G++ +  E +  +
Sbjct: 552 LLDEMV-EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 161/344 (46%), Gaps = 10/344 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  +   A+     M  + +     TF+ L+     A   AEA   F  M
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E+   P+++ ++++I   C++     A    D + +K   PD   Y  L+ G C  G +
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581

Query: 269 SEAERVFREMK--------MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           SEA     +++        + G  PNV TY+ +I+ LC+ G + +A  +  EML     P
Sbjct: 582 SEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLP 641

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N  T+   +         EK +Q+++ +   G  A+T+TYN LI   CK G++++A +VL
Sbjct: 642 NQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVL 700

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
            +M+  G +P+  +++ I     + GD+  A +++  M +    P+TV YN L+     +
Sbjct: 701 VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVT 760

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
                  +L+ +M    V+PN  TY  LI   C M   ++   Y
Sbjct: 761 GELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADY 804



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 161/357 (45%), Gaps = 2/357 (0%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           + LM    +   + T S ++   +R      A+H F+ +   G  PD   ++ V+  LC 
Sbjct: 168 VRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCE 227

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
            +    A+     ++    +  V  Y   +RG C+   + EA  +   +   G++ +V T
Sbjct: 228 LKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGT 287

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y  ++  LC+  +     ++  EM+E G  P+    +NL+    K         + N++K
Sbjct: 288 YCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK 347

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G       YN LI+  CKDGKL++A  + N+M  KG  PN  T++++     K G ++
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLD 407

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A    GKM ++  +     Y+ L+              L  EM  N ++PNV  Y  LI
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           + YC  G  +NA++   EM   K + P +  +  ++  L  A ++ +  +L  +MV+
Sbjct: 468 SGYCKEGELHNAFRLYHEM-TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 130/327 (39%), Gaps = 36/327 (11%)

Query: 238 QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           +SF DS +       + +  L++ + +     +   V R M   GI P + T S V++ L
Sbjct: 131 ESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGL 190

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
            R  Q   A  +F E++  G  P+   +  ++R   +     +  +V  +M+  GC+   
Sbjct: 191 IRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSV 250

Query: 358 ITYNFLIDCHCKDGKLEDAIKV-----------------------------------LNS 382
            TYN  I   CK+ ++ +A+++                                   +N 
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M+  G  P+ +  + +   + K G++  A  +  K+K     P+   YN L+        
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D    L   M    + PN  TY ILI  +C  G  + A  ++ +M E   +K     Y 
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG-IKATVYPYS 429

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++    + G+L+  + L ++M+  G 
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGL 456



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 1/128 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++IL+R + + G   EA      M + G +PD I++S +I   CR+    EA   ++S+
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++   PD + Y  L+ G C  G +++A  +  +M   G++PN  TY+ +I   C    +
Sbjct: 739 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 798

Query: 304 TRAHDVFA 311
           +   D F+
Sbjct: 799 SSTADYFS 806


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 175/366 (47%), Gaps = 2/366 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   ++ M  R V +    ++ ++  +   G    A   F+ M+  G A D + ++ +I+
Sbjct: 345 ALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMIN 404

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LCR     EA+     +   + + D + YT L+ G+C+ G ++EA ++   M   G+ P
Sbjct: 405 GLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTP 464

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+ + D LC+ G +  A+++  EM   G E N+ T+N+L+    KA   E+ ++  
Sbjct: 465 NVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTM 524

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M     + D  TY  LID  CK G L+ A  +L  M+ KG  P   T+N++       
Sbjct: 525 ADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 584

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V G  ++   M +    PN  TYN LM+ +    +     ++ K M   +V PN NTY
Sbjct: 585 GRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTY 644

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            ILI  +C   +   A  +  EMI +K  +  ++ Y  +++ L +  +  +  EL   M 
Sbjct: 645 NILIKGHCKARNMKEALYFHDEMI-QKGFRLTATSYSALIRLLNKKKKFVEARELFHDMR 703

Query: 526 DRGFTA 531
             G TA
Sbjct: 704 KEGLTA 709



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 171/346 (49%), Gaps = 5/346 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++IL++    AG   +A   F+ M     APD + + I+I   C       A    D
Sbjct: 259 VCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLD 315

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +     EP+  VYT++V   C  G IS+A RV  +M    +  +   Y+ V+   C  G
Sbjct: 316 EMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKG 375

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A   F EM   G   + +T+  ++    +A   E+  ++  +M     + D +TY 
Sbjct: 376 DLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYT 435

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID +CK GK+ +A ++ N+MV++G  PN  T+  +   + K GDV  A+ +  +M + 
Sbjct: 436 VLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             E N  TYN L+     +   +  ++   +M+   ++P+V TY  LI   C  G  + A
Sbjct: 496 GLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRA 555

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +  ++EM+ +K +KP    Y +++     +G+++  ++L++ M+++
Sbjct: 556 HSLLQEML-DKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEK 600



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 162/346 (46%), Gaps = 1/346 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MIN   +  + + A   +  M +R +++   T+++L+  Y + G  AEA    N M 
Sbjct: 399 YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ + ++ +   LC++     A      + +K  E +   Y +L+ G C+AG + 
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R   +M  A ++P+VYTY+ +IDALC+ G + RAH +  EML+ G +P  +T+N LM
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLM 578

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                + R E   ++ + M       +  TYN L+  +C +  ++   ++   M  +   
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG 638

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN +T+N++ +   K  ++  A   + +M          +Y+ L+++    K      +L
Sbjct: 639 PNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAREL 698

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
             +M +  +    + Y   I +     +  +      E++E   +K
Sbjct: 699 FHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASIVK 744



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 8/262 (3%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA  +F+E+       NV +Y+I++ ALC  G++  A  +F EM      P+ +T+  
Sbjct: 244 LDEAIELFQELP----HKNVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGI 296

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+  H      E  +++ ++M   G E +   Y  ++   C  G + DA++V+  MV++ 
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              + + +  +       GD+  A R + +M+      + VTY  ++     +   +   
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           KL +EM    ++ +  TY +LI  YC  G    A++    M+ ++ + P    Y  +   
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV-QRGVTPNVVTYTALTDG 475

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           L + G +Q   EL+ +M ++G 
Sbjct: 476 LCKQGDVQAANELLHEMSNKGL 497


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 200/431 (46%), Gaps = 23/431 (5%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
           +RH   +  ++  F+W+  +  + HS   Y+  ++   K     LA+     M+ R    
Sbjct: 12  LRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPP 71

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
              T+SI++R   +AG   +A     ++ E G   + I +S+VI   C+  R  +A   F
Sbjct: 72  DDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIF 131

Query: 242 DSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            ++       PDV+ + +L++G C    +SEA  +F  M  AG +PNV +YS ++D LC+
Sbjct: 132 KTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCK 191

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G++  A  ++ EM+E  C P+ + + + +    KA+R  +      +M   G +AD + 
Sbjct: 192 AGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVA 251

Query: 360 Y-----------------NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +                 N +I+  C+ G L++A K    M+ +   P+A  FN +   +
Sbjct: 252 FSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAV 311

Query: 403 SKLGDVNGAHRMYGKMKDLK---CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
            K   +     ++ +MK +K   C PN  TYNI++     +K  D   +L  EM    + 
Sbjct: 312 CKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLS 371

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+V TY  L+   C +G  + A   + EM +E    P S     +L  L +AG++     
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF-PDSFTDASILNALSKAGKVDYALS 430

Query: 520 LVEKMVDRGFT 530
            +E M  RG T
Sbjct: 431 HLETMKARGST 441



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 193/414 (46%), Gaps = 17/414 (4%)

Query: 114 HVIEKSCGVRHGIP-LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID 172
            ++EKSC     +P L+   SF   +        + D   +M+    K      +     
Sbjct: 204 EMVEKSC-----VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           L K  + E   +  + ++    R+G+  EA   F  M      P    F+ +I  +C+ +
Sbjct: 259 LCKKGHAE---EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 233 RASEAQSFFDSLKDKFE----PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R  +    F  +K   E    P++  Y  +V   C+A  + EA+ +  EM   G+ P+V 
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVV 375

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TYS ++D LC+ G++ RA D+  EM + G  P+S T  +++    KA + +  L     M
Sbjct: 376 TYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETM 435

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           K  G   D +TYN L+D  CK G++++AI  L  MV   C P+  ++ +I   + + G  
Sbjct: 436 KARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQA 495

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
            GAH ++ +M      P+TV Y+ L+   A +   D+ L+L   ++ +  +P+   ++++
Sbjct: 496 AGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMV 552

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           +   C  G   +A + +  M +       +  Y  V+  LR+ G++ K  +LV+
Sbjct: 553 LDGLCKAGKAEDACEVVERMADAG-FPADAFTYISVVSGLRKLGKVDKARQLVD 605



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 194/469 (41%), Gaps = 88/469 (18%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEI-TVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +I+   K  + D A      M S    +  V TF+ L++        +EA   F  M
Sbjct: 111 YSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYM 170

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            + GC P+ I++S ++  LC+  R  EA   ++ + +K   PD++ YT+ V G C+A  +
Sbjct: 171 AKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRV 230

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVI-----------------DALCRCGQITRAHDVFA 311
           +EA    R+M   G + +   +S VI                 + LCR G +  A   F 
Sbjct: 231 AEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFE 290

Query: 312 EML--------------------------------------EVGCEPNSITFNNLMRVHV 333
           EM+                                      E  C PN  T+N ++    
Sbjct: 291 EMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLC 350

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           KA + ++  ++ N+M   G   D +TY+ L+D  CK GKL+ A  +L  M ++G  P++ 
Sbjct: 351 KAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSF 410

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T   I   +SK G V+ A      MK     P+ VTYN L+     +   D  +    +M
Sbjct: 411 TDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL------------------- 494
              +  P+V +Y I+IT  C  G    A+   +EM++   L                   
Sbjct: 471 VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE 530

Query: 495 ------------KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
                       KP   +++MVL  L +AG+ +   E+VE+M D GF A
Sbjct: 531 DLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPA 579


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 190/371 (51%), Gaps = 5/371 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRMEEYGCAPDKIAF 221
           + DL +  +  +  +   +    F+ L++        ++A+     RM + GC P+  ++
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLVRGWCRAGNISEAERVFREM 278
           +I++  LC + R+ EA      + D      PDV+ YT ++ G+ + G++ +A   + EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              GI PNV TYS +I ALC+   + +A +V   M++ G  PN  T+N+++  +  + + 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           ++ +    +M   G E D +TYN L+D  CK+G+  +A K+ +SM ++G  P  +T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
            +  +  G +   H +   M      PN   ++IL+  +A     D  + +  +M +  +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+  TY  +I + C  G   +A +Y  +MI+E+ L PG+ VY  ++  L    +  K +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER-LSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 519 ELVEKMVDRGF 529
           EL+ +M+DRG 
Sbjct: 465 ELILEMLDRGI 475



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 178/379 (46%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K +  D A   +  M    V     T++ +V  Y  +G   EA+    +M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + ++ ++  LC+  R +EA+  FDS+ K   +P++  Y  L++G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E   +   M   GI PN Y +SI+I A  + G++ +A  VF++M + G  P+++T+  ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            +  K+ R E  ++ + QM         I YN LI   C   K + A +++  M+ +G  
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   FN I     K G V  + +++  M  +  +P+ +TY+ L+  +  +   D   KL
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    ++P+  TY  LI  YC +    +A    REM E   + P    Y ++LQ L 
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLF 595

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  +    +EL   + + G
Sbjct: 596 QTRRTAAAKELYVGITESG 614



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 188/388 (48%), Gaps = 10/388 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R ++  + T+  L++ Y   G   E    
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P+   FSI+I    ++ +  +A   F  ++ +   PD + Y  ++   C+
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + +A R F +M    + P    Y+ +I +LC   +  +A ++  EML+ G   ++I 
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+++  H K  R  +  ++++ M R+G + D ITY+ LID +C  GK+++A K+L SMV
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+N +     K+  +  A  ++ +M+     P+ +TYNI++Q    ++ T 
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVY 501
              +L   + E+  +  ++TY I++   C     NN       M +  C   L+  +  +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLC----KNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++  L + G+  + ++L   +   G 
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGL 685



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 163/378 (43%), Gaps = 36/378 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      FSIL+  Y + G   +A+  F++M + G  PD + +  VI ILC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 230 RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRG------W-------------------- 262
           +  R  +A  +F+ + D +  P  IVY +L+        W                    
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 263 ---------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                    C+ G + E+E++F  M   G++P++ TYS +ID  C  G++  A  + A M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + VG +P+ +T+N L+  + K SR E  L ++ +M+  G   D ITYN ++    +  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A ++   +   G     ST+N+I   + K    + A RM+  +     +  T T+NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +         D    L   +  N + P+V TY ++       G           M E  C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 494 LKPGSSVYEMVLQQLRRA 511
                 +  +V + L+R 
Sbjct: 721 TANSRMLNSIVRKLLQRG 738



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++ ++  + + G   +A   ++ M + G  P+ + +S +I+ LC+ +   +A     
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           S+ K+   P+   Y ++V G+C +G   EA    ++M   G++P+V TY+ ++D LC+ G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G +P   T+  L++ +       ++  + + M R G   +   ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K GK++ A+ V + M ++G NP+  T+  +   + K G V  A R + +M D 
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P  + YN L+         D   +L  EM +  +  +   +  +I  +C  G    +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            K    M+    +KP    Y  ++     AG++ +  +L+  MV  G 
Sbjct: 499 EKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 2/316 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M + G   D I F+ +I   C++ R  E++  FD + +   +PD+I Y+ L+ G+C AG 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++   M   G++P+  TY+ +I+  C+  ++  A  +F EM   G  P+ IT+N 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++   +  RT    ++Y  +   G + +  TYN ++   CK+   ++A+++  ++    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                 TFN++   + K+G  + A  ++  +      P+  TY+++ +        + + 
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L   MEEN    N      ++      G    A  Y+  MI+EK     +S   + L  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDL 768

Query: 508 LRRAGQLQKHEELVEK 523
           L      + H  L EK
Sbjct: 769 LSGGKYQEYHRFLPEK 784



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 7/302 (2%)

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG---IQPNVYTY 290
           A +A+  FD L  +     I   N         + + A   +  M  AG   + PN+ TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I+I + C  G++         +++ G   ++I F  L++      RT   +  V  +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRCISKLGD 407
           +LGC  +  +YN L+   C + + ++A+++L  M   G  C P+  ++  +     K GD
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A+  Y +M D    PN VTY+ ++     +++ D  +++   M +N V PN  TY  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++  YC  G    A  ++++M  +  ++P    Y  ++  L + G+  +  ++ + M  R
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 528 GF 529
           G 
Sbjct: 334 GL 335


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 192/419 (45%), Gaps = 44/419 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A+  +D M+ R +   V   + ++R   +AG   +A+  F  + 
Sbjct: 33  YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVA 92

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNI 268
              C PD I F+I++  L +  R  EA   F+S+    +  P+V+ YT ++ G C+ G +
Sbjct: 93  GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE---------------- 312
             A  +   M   G  PNV TYS++++ LC+ G+  +   +  E                
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 313 -------------------MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
                              M+  GC P  +T+N+LM +  ++ + ++  ++   M   GC
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN---- 409
             D I YN +I   C+D +L+DA  +L  MV   C P+  T++ I   + K   V+    
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 410 --GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
              A  +   MK   C PN  TY ++++    ++ +   L L + M ++EV P+++++ +
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +I   C     + AYK    M E +C KP    Y  ++  L + G++ K   + E MV+
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSEREC-KPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 174/349 (49%), Gaps = 7/349 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  L+    +AG   +A    + M + G  P     + VI  LC+  R  +A  +F ++
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG-IQPNVYTYSIVIDALCRCGQ 302
              K  PD+I +  LV    ++G + EA ++F  M  +    PNV TY+ VI+ LC+ G+
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + RA ++   M E GC PN IT++ L+    KA RT+K   +  +M R G + D I YN 
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L++  CK  +L++A++++  M+R GC P   T+N +     +   V+ A R+   M +  
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C P+ + YN ++         D    L K+M      P+V TY  +I   C     +  +
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADW 331

Query: 483 KY-----IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           K      I EM+++    P +  Y +V++ L RA + Q+   L+ +M+D
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 185/390 (47%), Gaps = 44/390 (11%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ ++    + G    A+   + M E GC P+ I +S+++  LC+  R  +  +   
Sbjct: 136 VVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQ 195

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  + F+PDVI+Y  L+ G C++  + EA  + + M  +G  P V TY+ +++  CR  
Sbjct: 196 EMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSK 255

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           Q+ RA  +   M E GC P+ I +N ++    + +R +    +  QM    C  D ITY+
Sbjct: 256 QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYS 315

Query: 362 FLIDCHCKDG------KLEDAIKVLNSMVRKGCNPNAST--------------------- 394
            +ID  CKD       KLE A ++L  M + GC PNA T                     
Sbjct: 316 TIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375

Query: 395 --------------FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
                         F+M+   + K  D++ A++++G M + +C+PN V Y  L+   +  
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D  +++ + M E+   P V TY  ++   CG+G    A + +  MI ++C   G+S 
Sbjct: 436 GEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS- 493

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           Y  +++ L R   +++  EL + +  +GF 
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKGFA 523



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 4/302 (1%)

Query: 225 ISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           +++L R  +  +A   F   +++  P+   Y +L+ G C+AG + +A  +  EM+  GI 
Sbjct: 5   LNLLVRAGQHGQAVQLFR--EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIP 62

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P V  ++ VI  LC+ G+   A   F  +    C P+ ITFN L+   VK+ R E+  Q+
Sbjct: 63  PGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122

Query: 345 YNQMKRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           +  M     C  + +TY  +I+  CKDGKL+ AI++L+ M   GC PN  T++++   + 
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLC 182

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G  +    +  +M     +P+ + YN L+     S+  D  L+L + M  +   P V 
Sbjct: 183 KAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV 242

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY  L+ ++C     + A++ I+ M E  C  P    Y  V+  L R  +L   + L+++
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGC-PPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 524 MV 525
           MV
Sbjct: 302 MV 303



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 162/352 (46%), Gaps = 10/352 (2%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y+ ++N   K R+ D A   + LM       TV T++ L+  + R+     A   
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
              M E GC PD I ++ VI+ LCR  R  +AQ+    +   +  PDVI Y+ ++ G C+
Sbjct: 264 IQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323

Query: 265 AGNIS------EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
              +        A  +   MK  G  PN  TY++VI+ LCR  +  +A  +   M++   
Sbjct: 324 DWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV 383

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+  +F+ ++    K+   +   +++  M    C+ + + Y  LID   K G+++ A++
Sbjct: 384 VPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVR 443

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           V   MV +   P  +T+N +   +  +G +  A RM   M   +C P+  +Y  L++   
Sbjct: 444 VFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLC 502

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
                +   +L + +E       V  Y +L+   C     ++A+    ++IE
Sbjct: 503 RVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 2/226 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + + A   +++MK         T+++++    RA  + +A+    RM +    PD  +FS
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFS 391

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           +VI  LC+      A   F  + ++  +P+ + Y  L+ G  + G + +A RVF E+ + 
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVE 450

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
             +P V TY+ V+D LC  G+I  A  +   M+   C P+  ++  L+R   + S  E+ 
Sbjct: 451 SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEA 510

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
            +++  ++  G   +   YN L++  CK  +L DA  V N ++  G
Sbjct: 511 YELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 84/202 (41%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    + R+   A   +  M    V   + +FS+++    ++     A   F  M 
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           E  C P+ +A++ +I  L +     +A   F+ + + F P V  Y +++ G C  G I E
Sbjct: 415 ERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEE 474

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A R+   M      P+  +Y  +I  LCR   +  A+++F  +   G       +N L+ 
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534

Query: 331 VHVKASRTEKVLQVYNQMKRLG 352
              K  R      V N++   G
Sbjct: 535 ELCKKKRLSDAHGVANKLIEAG 556



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 40/205 (19%)

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            N  + + V+A +  + +Q++ + +   C  +  TY  LI   CK GKL+ A ++L+ M 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  P  +  N + R + K G    A   +  +   KC P+ +T               
Sbjct: 58  DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIIT--------------- 102

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM-IEEKCLKPGSSVYEM 503
                               + IL+      G    A++    M    +CL P    Y  
Sbjct: 103 --------------------FNILVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTT 141

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           V+  L + G+L +  EL++ M + G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETG 166


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 191/396 (48%), Gaps = 40/396 (10%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   ++ MK       V +  +L+R + ++G         +RM E G  P+ I ++ +IS
Sbjct: 13  AEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLIS 72

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            LC+    +EA+S+   +     P+V+ Y  ++ G+C+A NI +A    REM+  G  P 
Sbjct: 73  CLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPT 132

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
            + YS ++ + C+ G +++A DVFAEM   GCEP+ + FN L+    +A +  +  +++ 
Sbjct: 133 PHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFR 192

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
            M   GC+ D +TYN +I   CK  KL++A+ +L  M ++  +P   T+  +   + K  
Sbjct: 193 SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFA 252

Query: 407 DVNGAHRMYGKMKDLKC-------------------------------------EPNTVT 429
            +  A+ ++ KM +  C                                      P  VT
Sbjct: 253 RLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVT 312

Query: 430 YNILMQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           YN L++ + +T+K  D  ++L   M +    PN+ TY ILI+  C       A+K +  M
Sbjct: 313 YNTLLEGLLSTAKLQD-AMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAM 371

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             +K   P   ++E++L +L RAG+L    EL ++M
Sbjct: 372 -RDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 175/379 (46%), Gaps = 38/379 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K R  + A  F+  M+      T   +S +V+ + + G  ++A+  F  M 
Sbjct: 101 YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMP 160

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             GC PD + F++++S L R R+  EA+  F S+  +  +PDV+ Y  ++ G C+   + 
Sbjct: 161 AKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLD 220

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +   MK   + P   TY+ +ID LC+  ++ +A++VF +M E  C      ++ L+
Sbjct: 221 EAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLI 280

Query: 330 RVH--VKASRTEKVLQVYNQMKRLGCEADTITYN-------------------------- 361
            ++   KA R  +  +++ +M+  G     +TYN                          
Sbjct: 281 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQV 340

Query: 362 ---------FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                     LI   CK  ++E+A K+L++M  KG  P+   + ++   +++ G ++ A 
Sbjct: 341 PAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAF 400

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +Y +M  + C+    + NIL+       S D      K+M +  + P+  TY  L+   
Sbjct: 401 ELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGL 460

Query: 473 CGMGHWNNAYKYIREMIEE 491
           C  G  + A K + E++ +
Sbjct: 461 CWQGKADQARKLVEELVRD 479



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 129/268 (48%), Gaps = 2/268 (0%)

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +R    A  +++AE +  EMK AG  P+V ++ ++I    + G   R       MLE G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            PN+I +NNL+    KA    +      +M +  C  + ++YN +ID +CK   +E A+ 
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            L  M   G  P    ++ I +   K G+V+ A  ++ +M    CEP+ V +N+L+    
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
            ++      +L + M     +P+V TY  +I   C     + A  ++ E ++++ + P  
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAV-FLLERMKQEDVSPTF 238

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVD 526
             Y  ++  L +  +LQ+  E+ EKM +
Sbjct: 239 VTYTTLIDHLCKFARLQQAYEVFEKMAE 266



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 7/312 (2%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+ +  + L+G  + R+   A      M SR  +  V T++ ++    +     EAV  
Sbjct: 166 PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 225

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----FEPDVIVYTNLVRG 261
             RM++   +P  + ++ +I  LC+  R  +A   F+ + +      EP   V   L+ G
Sbjct: 226 LERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLI-LING 284

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+A    EA+ +F+EM+  GI P V TY+ +++ L    ++  A ++   ML+    PN
Sbjct: 285 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPN 344

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  L+    K  + E+  ++ + M+  G       +  L+    + G+L+DA ++  
Sbjct: 345 MFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYK 404

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M R  C     + N++   I + G V+ A     +M D    P+  TY+ L+       
Sbjct: 405 EMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQG 464

Query: 442 STDMVLKLKKEM 453
             D   KL +E+
Sbjct: 465 KADQARKLVEEL 476



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 40/280 (14%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ MI    K ++ D A   ++ MK  +V  T  T++ L+    +     +A   
Sbjct: 201 PDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEV 260

Query: 206 FNRMEEYGCAPDKIAFSIVISI--LCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
           F +M E  C   + A+S++I I  LC+ RR  EA+  F  ++ +   P V+ Y  L+ G 
Sbjct: 261 FEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGL 320

Query: 263 -----------------------------------CRAGNISEAERVFREMKMAGIQPNV 287
                                              C+   + EA ++   M+  G  P++
Sbjct: 321 LSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSL 380

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             + +++  L R G++  A +++ EM  + C+    + N L+   ++    ++      Q
Sbjct: 381 KIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQ 440

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           M   G   D  TY+ L+   C  GK + A K++  +VR G
Sbjct: 441 MTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 198/390 (50%), Gaps = 8/390 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PDL  Y  +I    +  + DL +  +  +  +   +    F+ L++        ++A+ 
Sbjct: 84  TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143

Query: 205 -AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----FEPDVIVYTNLV 259
               RM E GC P+  +++I++  LC + R+ EA      + D       PDV+ YT ++
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+ + G+  +A   + EM   GI P+V TY+ +I ALC+   + +A +V   M++ G  
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +T+N+++  +  + + ++ +    +M+  G E D +TY+ L+D  CK+G+  +A K+
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            +SM ++G  P  +T+  + +  +  G +   H +   M      P+   ++IL+  +A 
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAN 383

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
               D  + +  +M +  + PN  TY  +I + C  G   +A  Y  +MI+E  L PG+ 
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG-LSPGNI 442

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           VY  ++  L    + ++ EEL+ +M+DRG 
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGI 472



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 184/384 (47%), Gaps = 4/384 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I    K +  D A   ++ M    V     T++ ++  Y  +G   EA+  
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
             +M   G  PD + +S+++  LC+  R  EA+  FDS+ K   +P++  Y  L++G+  
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + E   +   M   GI P+ Y +SI+I A    G++ +A  VF++M + G  PN++T
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVT 408

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++ +  K+ R E  +  + QM   G     I YN LI   C   K E A +++  M+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G   N   FN I     K G V  + +++  M  +  +PN +TYN L+  +  +   D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             +KL   M    ++PN  TY  LI  YC +    +A    +EM E   + P    Y ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM-ESSGVSPDIITYNII 587

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           LQ L +  +    +EL  ++ + G
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESG 611



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 177/358 (49%), Gaps = 8/358 (2%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M  R ++  + T+  L++ Y   G   E     + M   G  PD   FSI+I 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
               + +  +A   F  ++ +   P+ + Y  ++   C++G + +A   F +M   G+ P
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
               Y+ +I  LC C +  RA ++  EML+ G   N+I FN+++  H K  R  +  +++
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M R+G + + ITYN LI+ +C  GK+++A+K+L+ MV  G  PN  T++ +     K+
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             +  A  ++ +M+     P+ +TYNI++Q    ++ T    +L   + E+  +  ++TY
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            I++   C     ++A     +M +  C   LK  +  + +++  L + G+  + ++L
Sbjct: 620 NIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 205/480 (42%), Gaps = 49/480 (10%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTAR---PEFVHSP 148
           P  ++GF +   +  + P  V + +      ++G   ++    F+ +T R   PE     
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG-RCMEARKIFDSMTKRGLKPEITTYG 340

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
            L          V    L    +DLM    +      FSIL+  Y   G   +A+  F++
Sbjct: 341 TLLQGYATKGALVEMHGL----LDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSK 396

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG------ 261
           M + G  P+ + +  VI ILC+  R  +A  +F+ + D+   P  IVY +L+ G      
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 262 W-----------------------------CRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           W                             C+ G + E+E++F  M   G++PNV TY+ 
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I+  C  G++  A  + + M+ VG +PN++T++ L+  + K SR E  L ++ +M+  G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D ITYN ++    +  +   A ++   +   G     ST+N+I   + K    + A 
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636

Query: 413 RMYGK--MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           +M+    + DLK E    T+NI++         D    L      N + PN  TYR++  
Sbjct: 637 QMFQNLCLMDLKLEAR--TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              G G      +    M +  C    S +   ++++L + G++ +    +  + ++ F+
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGC-TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 753



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 12/303 (3%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA-----GIQPNVYTY 290
           +A+  FD L  +     I   N  R        S A  V R  +MA      + P++ TY
Sbjct: 33  DARHVFDELLRRGRGASIYGLN--RALADVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I+I   CR G++         +++ G   ++I F  L++      RT   +  V  +M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK---GCNPNASTFNMIFRCISKLG 406
            LGC  +  +YN L+   C + + ++A+++L+ M      G  P+  ++  +     K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           D + A+  Y +M D    P+ VTYN ++     +++ D  +++   M +N V P+  TY 
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++  YC  G    A  ++++M  +  ++P    Y +++  L + G+  +  ++ + M  
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 527 RGF 529
           RG 
Sbjct: 330 RGL 332



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 151 YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           Y+ +IN   LAGK+   D A   +  M S  ++    T+S L+  Y +     +A+  F 
Sbjct: 514 YNTLINGYCLAGKM---DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAG 266
            ME  G +PD I ++I++  L + RR + A+  +  + +   + ++  Y  ++ G C+  
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              +A ++F+ + +  ++    T++I+IDAL + G+   A D+F      G  PN  T+ 
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +    +     E++ Q++  M+  GC  D+   NF++    + G++  A   L+ +  K
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750

Query: 387 GCNPNASTFNMIFRCIS 403
             +  AST ++    +S
Sbjct: 751 HFSLEASTASLFIDLLS 767


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 184/376 (48%), Gaps = 2/376 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+N   K  +FD    F+  M+   +   + T++ L+  Y R GL  EA    N M + G
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P    ++ +I+ LC+K R + A+    + L     PD   Y  L+   CR  N SEA+
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 243

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F EM   G+ P++ ++S +I    R   + +A   F +M + G  P+++ +  LM  +
Sbjct: 244 EIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 303

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +     + L++ ++M   GC  D I YN +++  CK+  L DA K+ + MV +G  P+ 
Sbjct: 304 CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDF 363

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  +     + G++  A  ++G M     +P+ V YN L+  F      +   +L   
Sbjct: 364 YTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDG 423

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M   ++ PN  TY ILI  YC +GH + A++    MI EK +KP       V++   R+G
Sbjct: 424 MISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI-EKGIKPTLVTCNTVIKGYCRSG 482

Query: 513 QLQKHEELVEKMVDRG 528
              K +E + +M+ +G
Sbjct: 483 DSSKADEFLGRMIAKG 498



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 186/360 (51%), Gaps = 6/360 (1%)

Query: 173 LMKSRNVEITVDT--FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           L++  N+ ++ DT  ++ L+    R    +EA   F  M   G  PD ++FS +I++  R
Sbjct: 211 LIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSR 270

Query: 231 KRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            R   +A  +F  +K KF   PD ++YT L+ G+CR GN+ EA ++  EM   G   +V 
Sbjct: 271 NRHLDQALVYFRDMK-KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 329

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ +++ LC+   +T A  +F EM+E G  P+  TF  L+  H +     K L ++  M
Sbjct: 330 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            +   + D + YN LID  CK G++E A ++ + M+ +   PN  T+ ++      +G V
Sbjct: 390 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 449

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A R++  M +   +P  VT N +++ +  S  +    +    M    V P+  +Y  L
Sbjct: 450 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +    + + A+ +I +M E++ L P    Y +V+    R G++Q+ E ++ KM+++G
Sbjct: 510 INGFVREDNMDKAFLWINKM-EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 171/347 (49%), Gaps = 3/347 (0%)

Query: 184 DTFSILVRRYVRAGLA-AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           D  ++++R   R+G++  E V A        C  + + F ++I    + R+  E    F 
Sbjct: 13  DAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFR 72

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            L+ K +   +    +L+ G  +   +  A  V RE+  +GI+ NVYT +I+++ALC+ G
Sbjct: 73  ILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDG 132

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +        +EM   G   + +T+N L+  + +    E+  ++ N M   G +    TYN
Sbjct: 133 KFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYN 192

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+  CK G+   A  +L  M+  G +P+ +T+N +     +  + + A  ++G+M   
Sbjct: 193 AIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQ 252

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P+ V+++ L+ +F+ ++  D  L   ++M++  + P+   Y +L+  YC  G+   A
Sbjct: 253 GVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEA 312

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            K   EM+E+ C+      Y  +L  L +   L   ++L ++MV+RG
Sbjct: 313 LKIRDEMLEQGCVLD-VIAYNTILNGLCKEKMLTDADKLFDEMVERG 358



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 1/279 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   K +    A    D M  R       TF+ L+  + + G   +A+  F  M 
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 390

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           +    PD +A++ +I   C+     +A   +D +   K  P+ I Y  L+  +C  G++S
Sbjct: 391 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 450

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA R++  M   GI+P + T + VI   CR G  ++A +    M+  G  P+ I++N L+
Sbjct: 451 EAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 510

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              V+    +K     N+M++ G   D ITYN +++  C+ G++++A  VL  M+ KG N
Sbjct: 511 NGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGIN 570

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           P+ ST+  +        ++N A R + +M      P+ V
Sbjct: 571 PDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 158/352 (44%), Gaps = 38/352 (10%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  +I +  + R  D A  +   MK   +      +++L+  Y R G   EA+  
Sbjct: 256 PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 315

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------ 247
            + M E GC  D IA++ +++ LC+++  ++A   FD + ++                  
Sbjct: 316 RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQ 375

Query: 248 ------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                              +PD++ Y  L+ G+C+ G + +A  ++  M    I PN  T
Sbjct: 376 DGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHIT 435

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y I+I+A C  G ++ A  ++  M+E G +P  +T N +++ + ++  + K  +   +M 
Sbjct: 436 YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 495

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G   D I+YN LI+   ++  ++ A   +N M ++G  P+  T+N++     + G + 
Sbjct: 496 AKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQ 555

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
            A  +  KM +    P+  TY  L+    T  + +   +   EM +    P+
Sbjct: 556 EAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 147/344 (42%), Gaps = 2/344 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
            F +L+R YV+A    E   AF  +   G      A + ++  L +      A     + 
Sbjct: 50  VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           ++   E +V     +V   C+ G   + +    EM+  GI  ++ TY+ +I A CR G +
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A ++   M + G +P+  T+N ++    K  R  +   +  +M  +G   DT TYN L
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +   C+     +A ++   M+R+G  P+  +F+ +    S+   ++ A   +  MK    
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ V Y +LM  +  + +    LK++ EM E     +V  Y  ++   C      +A K
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 349

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
              EM+E   L P    +  ++    + G + K   L   M  R
Sbjct: 350 LFDEMVERGAL-PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 209/424 (49%), Gaps = 27/424 (6%)

Query: 131 VLSFFNWVTARPE-------FVHSPDLYHEMINLAGKVRQ-----------FDLAWHFID 172
           VLSFF W   R +        V       + + +A K+ Q              A    D
Sbjct: 111 VLSFFEWACLRRDPSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFARKLFD 170

Query: 173 LMKSRNVEITVDTFSILVRRY------VRAGLAAEAV-HAFNRMEEYGCAPDKIAFSIVI 225
            M +  + I+VD+ ++ +         ++  L  E V      M+  G  P+   ++ VI
Sbjct: 171 KMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVI 230

Query: 226 SILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            +LC+  + +EA+    + + +   PD ++YT L+ G+C+ GN+S A R+F EM+   I 
Sbjct: 231 LLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKIS 290

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+  TY+ VI  LC+ G++  A  +F EM+    EP+ +T+  L+  + K  + ++   +
Sbjct: 291 PDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSL 350

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +NQM ++G   + +TY  L D  CK G+++ A ++L+ M RKG   N  T+N +   + K
Sbjct: 351 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 410

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G+++ A ++   M+     P+ VTY  LM  +  S+      +L ++M + E++P V T
Sbjct: 411 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 470

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           + +L+  +C  G   +  K ++ M+ EK + P ++ Y  +++Q      ++   E+   M
Sbjct: 471 FNVLMNGFCMSGMLEDGEKLLKWML-EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 529

Query: 525 VDRG 528
             +G
Sbjct: 530 CAKG 533



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 181/361 (50%), Gaps = 2/361 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            I+ M+ + ++    T++ ++    + G  AEA      M   G APD + ++ +I   C
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +    S A   FD + K K  PD I YT ++ G C+ G + EA+++F EM    ++P+  
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+ +ID  C+ G++  A  +  +ML++G  PN +T+  L     K    +   ++ ++M
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            R G E +  TYN L++  CK G ++ A+K++  M   G +P+A T+  +     K  ++
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             AH +  +M D + +P  VT+N+LM  F  S   +   KL K M E  + PN  TY  L
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 509

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  YC   +     +  R M   K + P  + Y ++++   +A  +++   L   MV +G
Sbjct: 510 IKQYCIRNNMRATTEIYRGMC-AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568

Query: 529 F 529
           F
Sbjct: 569 F 569



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 185/417 (44%), Gaps = 37/417 (8%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P  Y+ +I L  K  +   A   +  M S  +      ++ L+  + + G  + A   F
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRA 265
           + M++   +PD I ++ VI  LC+  R  EA   F  +   + EPD + YT L+ G+C+ 
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + EA  +  +M   G+ PN+ TY+ + D LC+CG++  A+++  EM   G E N  T+
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD--------------- 370
           N+L+    KA   ++ +++   M+  G   D +TY  L+D +CK                
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 461

Query: 371 --------------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                               G LED  K+L  M+ KG  PNA+T+N + +      ++  
Sbjct: 462 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 521

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              +Y  M      P+  TYNIL++    +++      L ++M        V++Y  LI 
Sbjct: 522 TTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIK 581

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            +     +  A +   +M  E  L     +Y +        G+++   EL ++ +++
Sbjct: 582 GFYKRKKFLEARELFEQMRREG-LVADREIYNIFADINYDEGKMELTLELCDEAIEK 637



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 39/343 (11%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
            G+V + D  +H    M  + +E    T++ L+  Y + G   EA    N+M + G  P+
Sbjct: 306 TGRVMEADKLFH---EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 362

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + ++ +   LC+      A      + +   E ++  Y +LV G C+AGNI +A ++ +
Sbjct: 363 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 422

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML---------------------- 314
           +M++AG  P+  TY+ ++DA C+  ++ RAH++  +ML                      
Sbjct: 423 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSG 482

Query: 315 -------------EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
                        E G  PN+ T+N+L++ +   +      ++Y  M   G   D  TYN
Sbjct: 483 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYN 542

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  HCK   +++A  +   MV KG N   S++N + +   K      A  ++ +M+  
Sbjct: 543 ILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRRE 602

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
               +   YNI   +       ++ L+L  E  E  +  ++ T
Sbjct: 603 GLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 198/390 (50%), Gaps = 8/390 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PDL  Y  +I    +  + DL +  +  +  +   +    F+ L++        ++A+ 
Sbjct: 84  TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143

Query: 205 -AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----FEPDVIVYTNLV 259
               RM E GC P+  +++I++  LC + R+ EA      + D       PDV+ YT ++
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+ + G+  +A   + EM   GI P+V TY+ +I ALC+   + +A +V   M++ G  
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +T+N+++  +  + + ++ +    +M+  G E D +TY+ L+D  CK+G+  +A K+
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            +SM ++G  P  +T+  + +  +  G +   H +   M      P+   ++IL+  +A 
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
               D  + +  +M +  + PN  TY  +I + C  G   +A  Y  +MI+E  L PG+ 
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG-LSPGNI 442

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           VY  ++  L    + ++ EEL+ +M+DRG 
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGI 472



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 4/384 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I    K +  D A   ++ M    V     T++ ++  Y  +G   EA+  
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
             +M   G  PD + +S+++  LC+  R  EA+  FDS+ K   +P++  Y  L++G+  
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + E   +   M   GI P+ Y +SI+I A  + G++ +A  VF++M + G  PN++T
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++ +  K+ R E  +  + QM   G     I YN LI   C   K E A +++  M+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G   N   FN I     K G V  + +++  M  +  +PN +TYN L+  +  +   D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             +KL   M    ++PN  TY  LI  YC +    +A    +EM E   + P    Y ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM-ESSGVSPDIITYNII 587

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           LQ L +  +    +EL  ++ + G
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESG 611



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 178/358 (49%), Gaps = 8/358 (2%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M  R ++  + T+  L++ Y   G   E     + M   G  PD   FSI+I 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              ++ +  +A   F  ++ +   P+ + Y  ++   C++G + +A   F +M   G+ P
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
               Y+ +I  LC C +  RA ++  EML+ G   N+I FN+++  H K  R  +  +++
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M R+G + + ITYN LI+ +C  GK+++A+K+L+ MV  G  PN  T++ +     K+
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             +  A  ++ +M+     P+ +TYNI++Q    ++ T    +L   + E+  +  ++TY
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            I++   C     ++A     +M +  C   LK  +  + +++  L + G+  + ++L
Sbjct: 620 NIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 206/480 (42%), Gaps = 49/480 (10%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTAR---PEFVHSP 148
           P  ++GF +   +  + P  V + +      ++G   ++    F+ +T R   PE     
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG-RCMEARKIFDSMTKRGLKPEITTYG 340

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
            L          V    L    +DLM    +      FSIL+  Y + G   +A+  F++
Sbjct: 341 TLLQGYATKGALVEMHGL----LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG------ 261
           M + G  P+ + +  VI ILC+  R  +A  +F+ + D+   P  IVY +L+ G      
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 262 W-----------------------------CRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           W                             C+ G + E+E++F  M   G++PNV TY+ 
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I+  C  G++  A  + + M+ VG +PN++T++ L+  + K SR E  L ++ +M+  G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D ITYN ++    +  +   A ++   +   G     ST+N+I   + K    + A 
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636

Query: 413 RMYGK--MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           +M+    + DLK E    T+NI++         D    L      N + PN  TYR++  
Sbjct: 637 QMFQNLCLMDLKLEAR--TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              G G      +    M +  C    S +   ++++L + G++ +    +  + ++ F+
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGC-TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 753



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 12/303 (3%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA-----GIQPNVYTY 290
           +A+  FD L  +     I   N  R        S A  V R  +MA      + P++ TY
Sbjct: 33  DARHVFDELLRRGRGASIYGLN--RALADVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I+I   CR G++         +++ G   ++I F  L++      RT   +  V  +M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK---GCNPNASTFNMIFRCISKLG 406
            LGC  +  +YN L+   C + + ++A+++L+ M      G  P+  ++  +     K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           D + A+  Y +M D    P+ VTYN ++     +++ D  +++   M +N V P+  TY 
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++  YC  G    A  ++++M  +  ++P    Y +++  L + G+  +  ++ + M  
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 527 RGF 529
           RG 
Sbjct: 330 RGL 332



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 151 YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           Y+ +IN   LAGK+   D A   +  M S  ++    T+S L+  Y +     +A+  F 
Sbjct: 514 YNTLINGYCLAGKM---DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAG 266
            ME  G +PD I ++I++  L + RR + A+  +  + +   + ++  Y  ++ G C+  
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              +A ++F+ + +  ++    T++I+IDAL + G+   A D+F      G  PN  T+ 
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +    +     E++ Q++  M+  GC  D+   NF++    + G++  A   L+ +  K
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750

Query: 387 GCNPNASTFNMIFRCIS 403
             +  AST ++    +S
Sbjct: 751 HFSLEASTASLFIDLLS 767


>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Vitis vinifera]
          Length = 679

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 192/394 (48%), Gaps = 2/394 (0%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
              FF W   +  F H+   Y+ M+++ G+ RQF+     +  M  + + +T++TFSI +
Sbjct: 252 AFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGL-LTMETFSIAI 310

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           + +  A    +AV  F  M+ Y         + ++  L R +   EAQ+ F+ L+D+F P
Sbjct: 311 KAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTP 370

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           ++  YT L+ GWCR  N+ EA R + EM   G +P++  +  +++ L +C + + A  +F
Sbjct: 371 NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 430

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
             M   G  PN  T+  L+R   K  + ++ ++ +++M   GC+ D   Y  LI      
Sbjct: 431 EVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 490

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            K++    +L  M  KGC  +  T+N + + ++     + A R+Y KM     +    TY
Sbjct: 491 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTY 550

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           N++M+ +  +++ +M   + +EM      P+ N+Y + I      G    A +Y+ EMI 
Sbjct: 551 NMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMI- 609

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           EK +K     Y        RAG+    EEL  KM
Sbjct: 610 EKGMKAPQLDYNKFAADFSRAGKPDILEELARKM 643


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 200/431 (46%), Gaps = 23/431 (5%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
           +RH   +  ++  F+W+  +  + HS   Y+  ++   K     LA+     M+ R    
Sbjct: 12  LRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPP 71

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
              T+SI++R   +AG   +A     ++ E G   + I +S+VI   C+  R  +A   F
Sbjct: 72  DDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIF 131

Query: 242 DSLK--DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            ++       PDV+ + +L++G C    +SEA  +F  M  AG +PNV +YS ++D LC+
Sbjct: 132 KTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCK 191

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G++  A  ++ EM+E  C P+ + + + +    KA+R  +      +M   G +AD + 
Sbjct: 192 AGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVA 251

Query: 360 Y-----------------NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +                 N +I+  C+ G L++A K    M+ +   P+A  FN +   +
Sbjct: 252 FSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAV 311

Query: 403 SKLGDVNGAHRMYGKMKDLK---CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
            K   +     ++ +MK +K   C PN  TYNI++     +K  D   +L  EM    + 
Sbjct: 312 CKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLS 371

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+V TY  L+   C +G  + A   + EM +E    P S     +L  L +AG++     
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF-PDSFTDASILNALSKAGKVDYALS 430

Query: 520 LVEKMVDRGFT 530
            +E M  RG T
Sbjct: 431 HLETMKARGST 441



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 194/414 (46%), Gaps = 17/414 (4%)

Query: 114 HVIEKSCGVRHGIP-LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID 172
            ++EKSC     +P L+   SF   +        + D   +M+    K      +     
Sbjct: 204 EMVEKSC-----VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           L K  + E   +  + ++    R+G+  EA   F  M      P    F+ +I  +C+ +
Sbjct: 259 LCKKGHAE---EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 233 RASEAQSFFDSLKDKFE----PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R  +    F  +K   E    P++  Y  +V   C+A  + EA+ +  EM   G+ P+V 
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVV 375

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TYS ++D LC+ G++ RA D+  EM + G  P+S T  +++    KA + +  L     M
Sbjct: 376 TYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETM 435

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           K  G   D +TYN L+D  CK G++++AI  L  MV   C P+  ++ +I   + + G  
Sbjct: 436 KARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQA 495

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
            GAH ++ +M      P+TV Y+ L+   A +   D+ L+L   ++ +  +P+   ++++
Sbjct: 496 AGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMV 552

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           +   C  G   +A + +  M +       +  Y  V++ LR+ G++ K  +LV+
Sbjct: 553 VDGLCKAGKAEDACEVVERMADAG-FPADAFTYINVVRGLRKLGKVDKARQLVD 605



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 194/469 (41%), Gaps = 88/469 (18%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEI-TVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +I+   K  + D A      M +    +  V TF+ L++        +EA   F  M
Sbjct: 111 YSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYM 170

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            + GC P+ I++S ++  LC+  R  EA   ++ + +K   PD++ YT+ V G C+A  +
Sbjct: 171 AKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRV 230

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVI-----------------DALCRCGQITRAHDVFA 311
           +EA    R+M   G + +   +S VI                 + LCR G +  A   F 
Sbjct: 231 AEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFE 290

Query: 312 EML--------------------------------------EVGCEPNSITFNNLMRVHV 333
           EM+                                      E  C PN  T+N ++    
Sbjct: 291 EMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLC 350

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           KA + ++  ++ N+M   G   D +TY+ L+D  CK GKL+ A  +L  M ++G  P++ 
Sbjct: 351 KAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSF 410

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T   I   +SK G V+ A      MK     P+ VTYN L+     +   D  +    +M
Sbjct: 411 TDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL------------------- 494
              +  P+V +Y I+IT  C  G    A+   +EM++   L                   
Sbjct: 471 VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE 530

Query: 495 ------------KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
                       KP   +++MV+  L +AG+ +   E+VE+M D GF A
Sbjct: 531 DLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPA 579


>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
 gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
          Length = 506

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 213/438 (48%), Gaps = 19/438 (4%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPE-FVHSPD 149
           + +L+   S++     ++ S +R         R G      L FF W  +R   + H+P 
Sbjct: 73  VRTLAAECSEVRLTSGVADSLLR---------RCGDDWKSALGFFLWAQSRGGGYSHTPC 123

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
             + M++L GK+RQ D  W  +  M  R + +TVDT +  +RR   A    +A+  F+++
Sbjct: 124 ACNRMVDLLGKMRQIDRMWDLLSEMHCRGL-VTVDTIAKSIRRLAAARRWRDAILLFDQL 182

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E+ G   +    ++++  LC++R+   A+  F  L     PD   +   V GWC    I 
Sbjct: 183 EDLGLERNTETMNVLLDALCKERKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSVRRID 242

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA     EMK  G  P V TY+ V++A C+     R +++   M   GC PN IT+  +M
Sbjct: 243 EAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTMIM 302

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R E+ L V ++MK  GC+ DT+ YN LI+   + G L +A +V    + +   
Sbjct: 303 TSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPRNVV 362

Query: 390 P-NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDMVL 447
           P N +T+N +   + + G  + A  +  +M+   C+P+  TY  L++ +F     T  + 
Sbjct: 363 PRNVATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLLFGRRGQTGAIH 422

Query: 448 KLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            L  E+ + N +  +++TY +LI   C +G  + AY+   EM+  + + P     E++L 
Sbjct: 423 HLLSELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSE-IVPRPKTCELLLS 481

Query: 507 QLRRAGQLQKHEELVEKM 524
           + +R    Q  E  VE++
Sbjct: 482 ETQR----QNMEVYVERI 495



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 8/258 (3%)

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +F +++  G++ N  T ++++DALC+  ++  A +VF  ML     P++ TFN  +    
Sbjct: 178 LFDQLEDLGLERNTETMNVLLDALCKERKVELAREVFV-MLSPHIAPDAYTFNIFVHGWC 236

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
              R ++ +    +MK  G     ITY  +++ +CK        ++L+SM  +GC+PN  
Sbjct: 237 SVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVI 296

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK---STDMVLKLK 450
           T+ MI   ++K      A  +  +MK   C+P+T+ YN L+ +   +      + V ++ 
Sbjct: 297 TYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRV- 355

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL-R 509
            EM  N V  NV TY  +I++ C  G  ++A   ++EM  + C KP    Y+ +L+ L  
Sbjct: 356 -EMPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSC-KPDLQTYQPLLRLLFG 413

Query: 510 RAGQLQKHEELVEKMVDR 527
           R GQ      L+ ++ DR
Sbjct: 414 RRGQTGAIHHLLSELRDR 431


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 159/358 (44%), Gaps = 5/358 (1%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M+   V   V T+++LVR   +      A    + M   GC PD + ++ ++S+LC+ 
Sbjct: 148 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL 207

Query: 232 RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
            R  EA     ++     P    Y  +V   CR   + E   V  +M   G+QPNV TY+
Sbjct: 208 DRLDEATEVLAAMP----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYT 263

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            ++DA C+ G++  A  + A M+  GC PN +TF  L+R      R    L ++  M   
Sbjct: 264 TIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAE 323

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G    T++YN LI   C  G L+ A  +LNSM + GC PN  T++ +    SK GD+ GA
Sbjct: 324 GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGA 383

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++  M    C+PN V Y  ++ +F      +    L  +M      PN  T+  LI  
Sbjct: 384 ISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRS 443

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            C       A     EM    C+ P    Y  ++  L R G       +V +M   G 
Sbjct: 444 LCDCRRVGRALGVFHEMRRHGCV-PNGRTYNELIHGLFREGNCGDALHMVTEMQSHGI 500



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 3/287 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++IL+R     G    A    N ME++GC P+   +S +I    +      A S ++ +
Sbjct: 331 SYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 390

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +   +P+V+VYTN+V  +C+    ++A+ +  +M +    PN  T++ +I +LC C ++
Sbjct: 391 SRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRV 450

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            RA  VF EM   GC PN  T+N L+    +       L +  +M+  G E   +TYN +
Sbjct: 451 GRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTV 510

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +   C+     +A+  +  M+ +G  PNA TF+ I     K G+V  A  M G M  + C
Sbjct: 511 VSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNC 570

Query: 424 EPNTVTYNILM-QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             N + Y ILM ++    K  D +  L K + E  + PN  T+ +L+
Sbjct: 571 HRNILVYTILMAELCNQDKLVDAMTYLLKMLYEG-IYPNTVTWNVLV 616



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 31/293 (10%)

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C    +     V+  M+  G+ PNV+TY++++ ALC+  ++  A  +  EM   GC P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 323 ITFNNLMRVHVKAS------------------------------RTEKVLQVYNQMKRLG 352
           +T+  ++ V  K                                R ++V  V + M   G
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + + ITY  ++D  CK G+L  A  +L  MV  GC PN  TF  + R +   G V+ A 
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            M+  M      P+TV+YNIL++   +         +   ME++   PNV TY  LI  +
Sbjct: 315 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 374

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
              G    A     +M    C KP   VY  ++    +     + + L++KM+
Sbjct: 375 SKAGDLGGAISIWNDMSRSGC-KPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 426



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 53/342 (15%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L  + W+ A   +  S   Y+ +I     V     A   ++ M+       V T+S L+ 
Sbjct: 314 LDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 372

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEP 250
            + +AG    A+  +N M   GC P+ + ++ ++ + C+K   ++A+S  D  L +   P
Sbjct: 373 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 432

Query: 251 DVIVYTNLVRGWC-----------------------------------RAGNISEAERVF 275
           + + +  L+R  C                                   R GN  +A  + 
Sbjct: 433 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 492

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM+  GI+ ++ TY+ V+  LC+      A     +M+  G +PN+ TF+ ++  + K 
Sbjct: 493 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 552

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
                   +   M  + C  + + Y  L+   C   KL DA+  L  M+ +G  PN  T+
Sbjct: 553 GEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 612

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKC-EPNTVTYNILMQM 436
           N++ R               G  ++L C EP+    +I M +
Sbjct: 613 NVLVR---------------GVFRNLGCIEPSDFIQHITMNL 639



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 6/163 (3%)

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C +  +   + V ++M + G +PN  T+N++ R + +   V  A +M  +M    C P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VTY  ++ +       D   ++   M      P   +Y  ++   C        +  + +
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSD 249

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           M+    L+P    Y  ++    +AG+L+    ++ +MV  G T
Sbjct: 250 MVGRG-LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 291


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 198/409 (48%), Gaps = 11/409 (2%)

Query: 129 LQVLSF-FNWVTARPEFVHSPDL--YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEIT 182
           LQ L F F+ +    +  H P++  ++ +I    + GK+ +     H  D M     +  
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE---VLHLFDKMIGEGFQPN 172

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF- 241
           V T+  L+    + G  + A+     ME+  C PD + ++ +I  LC+ R+ ++A + F 
Sbjct: 173 VVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFS 232

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           + +     P +  Y +L+   C          +  EM  + I PNV  +S V+DALC+ G
Sbjct: 233 EMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEG 292

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  AHDV   M++ G EPN +T+N LM  H   S  ++ ++V++ M   G   D ++Y+
Sbjct: 293 KVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYS 352

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+ +CK  ++E A+ +   M RK   PN  T++ +   +  +G +  A  ++ +M   
Sbjct: 353 TLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 412

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P+ V+Y IL+     ++  D  + L K +E + ++P++  Y I+I   C  G    A
Sbjct: 413 GQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAA 472

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
                 +   K L P    Y +++  L + G L +  +L  +M  +G++
Sbjct: 473 RDLFSNL-SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYS 520



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 188/406 (46%), Gaps = 37/406 (9%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K++ +         M S  +   + T +IL+  +        A     ++ + G  P+  
Sbjct: 80  KMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIA 139

Query: 220 AFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            F+ +I  LC + +  E    FD +  + F+P+V+ Y  L+ G C+ G+ S A R+ R M
Sbjct: 140 TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM 199

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV------- 331
           +    QP+V  Y+ +ID+LC+  Q+T+A ++F+EM+  G  P+  T+N+L+         
Sbjct: 200 EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEW 259

Query: 332 -HVKASRTE------------------------KVLQ---VYNQMKRLGCEADTITYNFL 363
            HV A   E                        KV++   V + M + G E + +TYN L
Sbjct: 260 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 319

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D HC   ++++A+KV ++MV KG  P+  +++ +     K+  +  A  ++ +M   + 
Sbjct: 320 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 379

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PNTVTY+ LM            + L  EM      P+  +Y IL+   C     + A  
Sbjct: 380 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 439

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  IE   + P   +Y +V+  + RAG+L+   +L   +  +G 
Sbjct: 440 LLKA-IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 484



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 178/367 (48%), Gaps = 9/367 (2%)

Query: 130 QVLSFFNWVTARPEFVH---SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           QV   FN  +   E +H   SP +  Y+ +I+    + ++      ++ M +  +   V 
Sbjct: 223 QVTQAFNLFS---EMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVV 279

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            FS +V    + G   EA    + M + G  P+ + ++ ++   C +    EA   FD++
Sbjct: 280 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K F PDV+ Y+ L+ G+C+   I +A  +F EM    + PN  TYS ++  LC  G++
Sbjct: 340 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 399

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F EM+  G  P+ +++  L+    K  R ++ + +   ++    + D   Y  +
Sbjct: 400 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 459

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  C+ G+LE A  + +++  KG +PN  T+ ++   + + G +  A +++G+MK    
Sbjct: 460 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN  TYN++ + F  +  T   ++L +EM       +V+T  +L+ M    G   +  +
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQ 579

Query: 484 YIREMIE 490
            + E ++
Sbjct: 580 ILSEFLQ 586



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 134/280 (47%), Gaps = 1/280 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +T L+    +  + S    +  +M   GI PN+YT +I+I++ C   ++  A  V
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L++G +PN  TFN L+R      +  +VL ++++M   G + + +TY  LI+  CK
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G    AI++L SM +  C P+   +  I   + K   V  A  ++ +M      P+  T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN L+           V  L  EM  +++ PNV  +  ++   C  G    A+  +  MI
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++ ++P    Y  ++       ++ +  ++ + MV +GF
Sbjct: 306 -KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 193/401 (48%), Gaps = 7/401 (1%)

Query: 131 VLSFFNWVTAR--PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            L  F WV  R   E + +  +   +I++ GK  +   A   +  +     ++ V  ++ 
Sbjct: 146 ALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTS 205

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK 247
           ++  +   G   EAV  F +MEE GC P  I +++++++  +     ++     D +K  
Sbjct: 206 MITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSA 265

Query: 248 -FEPDVIVYTNLVRGWCRAGNI-SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
              PD   Y  L+   CR GN+  EA  V +EMK+AG  P+  TY+ ++D   +  +   
Sbjct: 266 GIAPDSYTYNTLI-SCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKE 324

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A +V  EM   GC P+ +T+N+L+  + +    E  L++ NQM   G + D  TY  L+ 
Sbjct: 325 AMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLS 384

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              K GK + A+++   M  +GC PN  TFN + +     G      +++  +K  +C P
Sbjct: 385 GFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP 444

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + VT+N L+ +F  +     V  + KEM+     P  +T+  LI+ Y   G ++ A    
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 504

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           + M+E   + P  S Y  VL  L R G  ++ E+++ +M D
Sbjct: 505 KRMLEAG-VNPDLSSYNAVLAALARGGLWKQSEKVLAEMKD 544



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/420 (22%), Positives = 190/420 (45%), Gaps = 44/420 (10%)

Query: 151 YHEMINLAGKVRQFDLAWH----FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           Y+ ++N+ GK+    + W+     +D MKS  +     T++ L+    R  L  EA    
Sbjct: 238 YNVILNVYGKM---GMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVL 294

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRA 265
             M+  G +PDK+ ++ ++ +  + RR+ EA      ++ +   P ++ Y +L+  + R 
Sbjct: 295 KEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARD 354

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + +A  +  +M   GI+P+V+TY+ ++    + G+   A  +F EM   GC+PN  TF
Sbjct: 355 GLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTF 414

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT-------------------------- 359
           N L+++H    +  ++++V+  +K   C  D +T                          
Sbjct: 415 NALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKR 474

Query: 360 ---------YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                    +N LI  + + G  + A+ V   M+  G NP+ S++N +   +++ G    
Sbjct: 475 AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQ 534

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           + ++  +MKD +C+PN +TY  L+  +A  K  + +  L +E+    +EP     + L+ 
Sbjct: 535 SEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVL 594

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +           +   E+  ++   P  +    ++    R   + K  E+++ M   GFT
Sbjct: 595 VNSKCDLLMETERAFLEL-RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFT 653



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/346 (22%), Positives = 165/346 (47%), Gaps = 3/346 (0%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++     L+G  K  +   A    + M++   +  + TF+ L++ +   G   E +  
Sbjct: 374 PDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKV 433

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  ++ + C+PD + ++ ++S+  +    SE    F  +K   F P+   +  L+  + R
Sbjct: 434 FEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSR 493

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G+  +A  V++ M  AG+ P++ +Y+ V+ AL R G   ++  V AEM +  C+PN +T
Sbjct: 494 CGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELT 553

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+  +      E++  +  ++     E   +    L+  + K   L +  +    + 
Sbjct: 554 YCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELR 613

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           ++G +P+ +T N +     +   V  A+ +   MK     P+  TYN LM M++ S + +
Sbjct: 614 QRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFE 673

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
              ++ +E+    + P++ +Y  +I  YC  G   +A + + EM E
Sbjct: 674 RSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRE 719



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 139/306 (45%), Gaps = 1/306 (0%)

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           DTF+ L+  Y R G   +A+  + RM E G  PD  +++ V++ L R     +++     
Sbjct: 482 DTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAE 541

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +KD + +P+ + Y +L+  +     I     +  E+    I+P       ++    +C  
Sbjct: 542 MKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDL 601

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +      F E+ + G  P+  T N ++ ++ +     K  ++ + MKR G      TYN 
Sbjct: 602 LMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNS 661

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  + +    E + ++L  ++ KG  P+  ++N +     + G +  A R+  +M++  
Sbjct: 662 LMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESG 721

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN  +  +A        + +   M ++  +PN +TY  ++  YC +   + A 
Sbjct: 722 PAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEAS 781

Query: 483 KYIREM 488
            ++  +
Sbjct: 782 MFVNNL 787



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/356 (20%), Positives = 156/356 (43%), Gaps = 2/356 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I + G   +F       + +K+      + T++ L+  + + G+ +E    F  M+
Sbjct: 414 FNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMK 473

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P++  F+ +IS   R     +A + +   L+    PD+  Y  ++    R G   
Sbjct: 474 RAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWK 533

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           ++E+V  EMK    +PN  TY  ++ A     +I R   +  E+     EP ++    L+
Sbjct: 534 QSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLV 593

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            V+ K     +  + + ++++ G   D  T N ++  + +   +  A ++L+ M R G  
Sbjct: 594 LVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFT 653

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ +T+N +    S+  +   +  +  ++      P+ ++YN ++  +  +       ++
Sbjct: 654 PSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRV 713

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             EM E+   P++ TY   I  Y     +  A   +  MI+  C KP  S Y  ++
Sbjct: 714 LSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGC-KPNQSTYNSIV 768



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 137/301 (45%), Gaps = 7/301 (2%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV   D ++ +I+   +   FD A      M    V   + +++ ++    R GL  
Sbjct: 474 RAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWK 533

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCR----KRRASEAQSFFDSLKDKFEPDVIVYT 256
           ++      M++  C P+++ +  ++         +R  + A+  +  +    EP  ++  
Sbjct: 534 QSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI---IEPRAVLLK 590

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            LV    +   + E ER F E++  G  P++ T + ++    R   + +A+++   M   
Sbjct: 591 TLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRG 650

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P+  T+N+LM ++ +++  E+  ++  ++   G   D I+YN +I  +C++G++ DA
Sbjct: 651 GFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDA 710

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            +VL+ M   G  P+  T+N      +       A  +   M    C+PN  TYN ++  
Sbjct: 711 SRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDW 770

Query: 437 F 437
           +
Sbjct: 771 Y 771



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 2/141 (1%)

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N S   +I   + K G V+ A  +   +     + +   Y  ++  F ++      + + 
Sbjct: 164 NGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVF 223

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGH-WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
           K+MEE   +P + TY +++ +Y  MG  WN     +  M +   + P S  Y  ++   R
Sbjct: 224 KKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRM-KSAGIAPDSYTYNTLISCCR 282

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           R    ++   ++++M   GF+
Sbjct: 283 RGNLYEEAAGVLKEMKLAGFS 303


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 178/346 (51%), Gaps = 3/346 (0%)

Query: 186 FSILVRRYVRAGLAAEA-VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           F+IL+  YV++G   EA    +++M + GC PD   F+ +I  LC+K     A    + +
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 245 K-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +   P++I YT L+ G+C+   + EA  V  EM   G + N+  Y++++ ALC+ G++
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A D+  EM + GC+P+  TFN L+    K  R E  L +Y  M   G  A+T+TYN L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I    + G +++A+K++N M+ +GC  +  T+N + +   KLG    A  ++ +M     
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ ++ N+L+            L+L ++M    + P+V TY  LI   C MG+   A+ 
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              ++  E  ++P +  Y  ++    RAG       L+ + V+  F
Sbjct: 647 LFNKLQAEG-IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAF 691



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 181/373 (48%), Gaps = 4/373 (1%)

Query: 145 VHSPDLYHEMINLAGKVR--QFDLAWHFI-DLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           V +P+  H  I + G V+  + D A  F+ D M        V TF+ L+    + GL   
Sbjct: 339 VPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGS 398

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
           AV   N M   GC P+ I ++ ++   C+K +  EA    + +  K FE +++ Y  L+R
Sbjct: 399 AVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLR 458

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
             C+ G + +A  +  EM   G +P+++T++ +I  LC+  +   A  ++ +ML  G   
Sbjct: 459 ALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIA 518

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N++T+N L+   ++    ++ L++ N M   GC  D ITYN LI   CK G  E A+ + 
Sbjct: 519 NTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLF 578

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + MVRK   P+  + N++   + ++G V  A  +   M      P+ VTYN L+      
Sbjct: 579 DEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKM 638

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
            +      L  +++   ++P+  TY  LI  +C  G +++AY  +   +E   +    + 
Sbjct: 639 GNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTW 698

Query: 501 YEMVLQQLRRAGQ 513
           Y +V   ++  G+
Sbjct: 699 YILVSNFIKEIGK 711



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 187/466 (40%), Gaps = 70/466 (15%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           ++ F W  ++  + H+ D+YH +I+  G  ++F +    +  +K   +      F  +++
Sbjct: 86  MAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMK 145

Query: 192 RYVRAGLAAEAV------------------------------------HAFNRMEEYGCA 215
            Y RA L  +A                                     + F  M   G  
Sbjct: 146 YYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVI 205

Query: 216 PDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P    F +V+  LC       A S   D  K    P+ +VY  L+    +   ++EA ++
Sbjct: 206 PTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKL 265

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF----NNLMR 330
             EM + G  P+V T++ VI  LCR  +I     +   ML  G  PN IT+    N L R
Sbjct: 266 LEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCR 325

Query: 331 V---------------------------HVKASRTEKV-LQVYNQMKRLGCEADTITYNF 362
           V                           +VK+ R ++    +Y++M + GC  D  T+N 
Sbjct: 326 VGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNT 385

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI   CK G +  A+ ++N M   GC PN  T+  +     K   +  A  +  +M    
Sbjct: 386 LIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            E N + YN+L++    +      L +  EM +   +P++ T+  LI   C +    +A 
Sbjct: 446 FELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDAL 505

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              R+M+ +  +   +  Y  ++    R G +Q+  +LV  M+ RG
Sbjct: 506 ALYRDMLLDGVI-ANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 14/315 (4%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVI-----VYTNLVRGWCRAGNISEAERVFREM 278
           V  +L  K  A++     D L  + + + I     ++  +++ + RA    +A R+  +M
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 279 K-MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           K +   +P   +Y++V+D L      + A +VF EML  G  P   TF  +M+     + 
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +    +   M + GC  +++ Y  LI    K  ++ +A+K+L  M   GC P+  TFN 
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + +L  ++   ++  +M      PN +TY +LM         D     + ++  N+
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVD-----EAQVLLNK 338

Query: 458 V-EPNVNTYRILITMYCGMGHWNNAYKYIRE-MIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
           V  PN   + ILI  Y   G  + A  ++ + MI+  C +P    +  ++  L + G + 
Sbjct: 339 VPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGC-RPDVFTFNTLIHGLCKKGLMG 397

Query: 516 KHEELVEKMVDRGFT 530
              ++V  M   G T
Sbjct: 398 SAVDMVNDMSANGCT 412


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 179/367 (48%), Gaps = 5/367 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A H  D M     +  V T+  L+    + G  + A+     ME+  C PD 
Sbjct: 140 GKIGE---ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDV 196

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ +I  LC+ R+ +EA + F  +  +   PD+  YT+LV   C          +  +
Sbjct: 197 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 256

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M  + I P+V  +S V+DALC+ G++T AH++   M++ G EP+ +T+  LM  H   S 
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 316

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            ++ ++V++ M R G   D I+Y  LI+ +CK  K++ A+ +   M RK   P+  T+N 
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 376

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +  +G +  A  ++ +M      P+ VTY+IL+     +   +  + L K +E + 
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + P++  Y I+I   C  G    A      +   K L P    Y +++  L + G L + 
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNL-SSKGLHPSVWTYNIMIHGLCKRGLLNEA 495

Query: 518 EELVEKM 524
            +L  +M
Sbjct: 496 NKLFMEM 502



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 189/415 (45%), Gaps = 37/415 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           + +++    K++ +         M S  V   V T +IL+  +        A     ++ 
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 118

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   F+ +I  LC + +  EA   FD + D+ F+P+V+ Y  L+ G C+ GN S
Sbjct: 119 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+ R M+    QP+V  Y+ +ID+LC+  Q+T A ++F++M+  G  P+  T+ +L+
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238

Query: 330 RV--------HV---------------------------KASRTEKVLQVYNQMKRLGCE 354
                     HV                           K  +  +  ++ + M + G E
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D +TY  L+D HC   ++++A+KV + MVRKG  P+  ++  +     K+  ++ A  +
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 358

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M   +  P+T TYN LM            + L  EM      P++ TY IL+   C 
Sbjct: 359 FEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 418

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             H   A   ++  IE   L P   VY +++  + RAG+L+   +L   +  +G 
Sbjct: 419 NCHLEEAMALLKA-IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 472



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 174/380 (45%), Gaps = 5/380 (1%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   +I   C V +    +++L        +P+ V    +Y  +I+   K RQ   A++ 
Sbjct: 163 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV----IYTSIIDSLCKDRQVTEAFNL 218

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
              M  + +   + T++ LV                N+M      PD + FS V+  LC+
Sbjct: 219 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 278

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           + + +EA    D +  +  EPDV+ YT L+ G C    + EA +VF  M   G  P+V +
Sbjct: 279 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +I+  C+  +I +A  +F EM      P++ T+N LM       R +  + ++++M 
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G   D +TY+ L+D  CK+  LE+A+ +L ++     NP+   +N+I   + + G++ 
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 458

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++  +      P+  TYNI++         +   KL  EM+ N+  P+  TY  + 
Sbjct: 459 AARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIA 518

Query: 470 TMYCGMGHWNNAYKYIREMI 489
             +        A + + EM+
Sbjct: 519 RGFLQNNETLRAIQLLEEML 538



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 3/345 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           QV   FN  +       SPD+  Y  +++    + ++      ++ M +  +   V  FS
Sbjct: 211 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 270

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            +V    + G   EA    + M + G  PD + ++ ++   C +    EA   FD +  K
Sbjct: 271 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 330

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
            F PDVI YT L+ G+C+   I +A  +F EM      P+  TY+ ++  LC  G++  A
Sbjct: 331 GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDA 390

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM+  G  P+ +T++ L+    K    E+ + +   ++      D   YN +ID 
Sbjct: 391 IALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDG 450

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+LE A  + +++  KG +P+  T+N++   + K G +N A++++ +M    C P+
Sbjct: 451 MCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPD 510

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             TYN + + F  +  T   ++L +EM       +V+T  +L+ M
Sbjct: 511 GCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM 555



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 3/228 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +IN   K+ + D A +  + M  +       T++ L+      G   +A+ 
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
            F+ M   G  PD + +SI++  LC+     EA +   +++     PD+ VY  ++ G C
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RAG +  A  +F  +   G+ P+V+TY+I+I  LC+ G +  A+ +F EM    C P+  
Sbjct: 453 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 512

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           T+N + R  ++ + T + +Q+  +M   G  AD  T   L++    DG
Sbjct: 513 TYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 132/280 (47%), Gaps = 1/280 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P ++ +  L+    +  + S    +  +M   G+ PNVYT +I+I++ C   ++  A  V
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L++G +P+  TF  L+R      +  + L ++++M   G + + +TY  LI+  CK
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G    AI++L SM +  C P+   +  I   + K   V  A  ++ +M      P+  T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L+           V  L  +M  +++ P+V  +  ++   C  G    A++ +  MI
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++ ++P    Y  ++       ++ +  ++ + MV +GF
Sbjct: 294 -QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 154/352 (43%), Gaps = 53/352 (15%)

Query: 98  FSQISTAHSISP-----STVRHVIEKSCGVRHGIPLLQVLSFFNWVTAR--PEFVHSPDL 150
           FSQ+     ISP     +++ H +   C  +H   LL  +     V ++  P+ V    +
Sbjct: 219 FSQM-VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM-----VNSKILPDVV----I 268

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +++   K  +   A   +D+M  R VE  V T++ L+  +       EAV  F+ M 
Sbjct: 269 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 328

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G APD I+++ +I+  C+  +  +A   F+ + + ++ PD   Y  L+ G C  G + 
Sbjct: 329 RKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQ 388

Query: 270 EAERVFREMKMAGIQPNVYTYSI-----------------------------------VI 294
           +A  +F EM   G  P++ TYSI                                   +I
Sbjct: 389 DAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIII 448

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           D +CR G++  A D+F+ +   G  P+  T+N ++    K     +  +++ +M    C 
Sbjct: 449 DGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCS 508

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
            D  TYN +     ++ +   AI++L  M+ +G + + ST  ++   +S  G
Sbjct: 509 PDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 36/254 (14%)

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  +L +   P+ + F  L+    K      VL +  QM   G   +  T N LI+  C 
Sbjct: 44  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 103

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             ++  A  VL  +++ G  P+ +TF  + R +   G +  A  ++ KM D   +PN VT
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 163

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENE-------------------------------- 457
           Y  L+       +T   ++L + ME+                                  
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223

Query: 458 ---VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              + P++ TY  L+   C +  W +    + +M+  K L P   ++  V+  L + G++
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL-PDVVIFSTVVDALCKEGKV 282

Query: 515 QKHEELVEKMVDRG 528
            +  E+V+ M+ RG
Sbjct: 283 TEAHEIVDMMIQRG 296


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 198/409 (48%), Gaps = 11/409 (2%)

Query: 129 LQVLSF-FNWVTARPEFVHSPDL--YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEIT 182
           LQ L F F+ +    +  H P++  ++ +I    + GK+ +     H  D M     +  
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE---VLHLFDKMIGEGFQPN 163

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF- 241
           V T+  L+    + G  + A+     ME+  C PD + ++ +I  LC+ R+ ++A + F 
Sbjct: 164 VVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFS 223

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           + +     P +  Y +L+   C          +  EM  + I PNV  +S V+DALC+ G
Sbjct: 224 EMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEG 283

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  AHDV   M++ G EPN +T+N LM  H   S  ++ ++V++ M   G   D ++Y+
Sbjct: 284 KVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYS 343

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+ +CK  ++E A+ +   M RK   PN  T++ +   +  +G +  A  ++ +M   
Sbjct: 344 TLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 403

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P+ V+Y IL+     ++  D  + L K +E + ++P++  Y I+I   C  G    A
Sbjct: 404 GQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAA 463

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
                 +   K L P    Y +++  L + G L +  +L  +M  +G++
Sbjct: 464 RDLFSNL-SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYS 511



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 188/406 (46%), Gaps = 37/406 (9%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K++ +         M S  +   + T +IL+  +        A     ++ + G  P+  
Sbjct: 71  KMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIA 130

Query: 220 AFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            F+ +I  LC + +  E    FD +  + F+P+V+ Y  L+ G C+ G+ S A R+ R M
Sbjct: 131 TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM 190

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV------- 331
           +    QP+V  Y+ +ID+LC+  Q+T+A ++F+EM+  G  P+  T+N+L+         
Sbjct: 191 EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEW 250

Query: 332 -HVKASRTE------------------------KVLQ---VYNQMKRLGCEADTITYNFL 363
            HV A   E                        KV++   V + M + G E + +TYN L
Sbjct: 251 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 310

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D HC   ++++A+KV ++MV KG  P+  +++ +     K+  +  A  ++ +M   + 
Sbjct: 311 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 370

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PNTVTY+ LM            + L  EM      P+  +Y IL+   C     + A  
Sbjct: 371 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 430

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  IE   + P   +Y +V+  + RAG+L+   +L   +  +G 
Sbjct: 431 LLKA-IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 475



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 178/367 (48%), Gaps = 9/367 (2%)

Query: 130 QVLSFFNWVTARPEFVH---SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           QV   FN  +   E +H   SP +  Y+ +I+    + ++      ++ M +  +   V 
Sbjct: 214 QVTQAFNLFS---EMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVV 270

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            FS +V    + G   EA    + M + G  P+ + ++ ++   C +    EA   FD++
Sbjct: 271 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K F PDV+ Y+ L+ G+C+   I +A  +F EM    + PN  TYS ++  LC  G++
Sbjct: 331 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 390

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F EM+  G  P+ +++  L+    K  R ++ + +   ++    + D   Y  +
Sbjct: 391 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 450

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  C+ G+LE A  + +++  KG +PN  T+ ++   + + G +  A +++G+MK    
Sbjct: 451 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN  TYN++ + F  +  T   ++L +EM       +V+T  +L+ M    G   +  +
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQ 570

Query: 484 YIREMIE 490
            + E ++
Sbjct: 571 ILSEFLQ 577



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 134/280 (47%), Gaps = 1/280 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +T L+    +  + S    +  +M   GI PN+YT +I+I++ C   ++  A  V
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L++G +PN  TFN L+R      +  +VL ++++M   G + + +TY  LI+  CK
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G    AI++L SM +  C P+   +  I   + K   V  A  ++ +M      P+  T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN L+           V  L  EM  +++ PNV  +  ++   C  G    A+  +  MI
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++ ++P    Y  ++       ++ +  ++ + MV +GF
Sbjct: 297 -KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335


>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
 gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
          Length = 532

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 185/364 (50%), Gaps = 15/364 (4%)

Query: 134 FFNWVTAR----PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           FFNWV  R     +F     +Y+E++ + GK R+F+     +  M  R   +  +T+S+L
Sbjct: 143 FFNWVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVL 202

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           + RY  A    EA+  F R +E+G   + IAF  ++  LCR +    A++ F S K +F 
Sbjct: 203 LNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKHEFV 262

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
            D+     ++ GWC  GN+ EA+R +RE+  +  +P++YTY  +I++L + G++  A  +
Sbjct: 263 TDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKL 322

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M E G   + +  N ++       R  + L+++ +M   GC A+  TYN LI   CK
Sbjct: 323 FRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCK 382

Query: 370 DGKLEDAIKVLNSM-VRKG-CNPNASTFNMIFRCISKLGDVNGAHR---MYGKMKDLKCE 424
             ++E   ++LN M  RKG C PN+ TF      I  LG V G      ++ +M+   C+
Sbjct: 383 IRRMEKVNELLNEMEERKGSCWPNSVTF------IYLLGSVRGPEEVPVLFQRMERSGCK 436

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
             +  YN++++++      + V     EM+E  + P+  +Y I+I      G   +  +Y
Sbjct: 437 MTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTIMIHGLYEKGRTKDGLRY 496

Query: 485 IREM 488
             EM
Sbjct: 497 FNEM 500



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 112/267 (41%), Gaps = 4/267 (1%)

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           ++KF P  ++Y  ++    +     E ++V  EM       N  TYS++++      ++ 
Sbjct: 154 EEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVE 213

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +F    E G E N I F +L+    +    E    +++  K+     D  T N ++
Sbjct: 214 EAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHS-KKHEFVTDIKTSNIIL 272

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           +  C  G + +A +    ++   C P+  T+  +   ++K G +  A +++  M +    
Sbjct: 273 NGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLT 332

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            + V  N ++      K     L++ KEM E     NV TY  LI   C +       + 
Sbjct: 333 TDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNEL 392

Query: 485 IREMIEEK--CLKPGSSVYEMVLQQLR 509
           + EM E K  C  P S  +  +L  +R
Sbjct: 393 LNEMEERKGSCW-PNSVTFIYLLGSVR 418



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 2/249 (0%)

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P    Y+ ++  L +  +      V  EM +     N  T++ L+  +  A + E+ + +
Sbjct: 159 PGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISI 218

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + + +  G E + I +  L+   C+   +E A  + +S   +    +  T N+I      
Sbjct: 219 FYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKHEFVT-DIKTSNIILNGWCV 277

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           LG+V+ A R + ++ + KCEP+  TY  L+            LKL + M E  +  +V  
Sbjct: 278 LGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVI 337

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              +I   C       A +  +EM E  C     + Y  +++ L +  +++K  EL+ +M
Sbjct: 338 CNCIIDALCFKKRIPEALEIFKEMNERGC-AANVATYNTLIKHLCKIRRMEKVNELLNEM 396

Query: 525 VDRGFTARP 533
            +R  +  P
Sbjct: 397 EERKGSCWP 405



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 14/237 (5%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y    +IN   K  +   A      M  R +   V   + ++          EA+  
Sbjct: 298 PDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEI 357

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGW 262
           F  M E GCA +   ++ +I  LC+ RR  +     + ++++     P+ + +  L+   
Sbjct: 358 FKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLL--- 414

Query: 263 CRAGNISEAERV---FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
              G++   E V   F+ M+ +G +     Y++++          R    + EM E+G  
Sbjct: 415 ---GSVRGPEEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLG 471

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           P+  ++  ++    +  RT+  L+ +N+M   G   +  T   +   + K+ K + A
Sbjct: 472 PDRRSYTIMIHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEKLVNATNVKEPKCQKA 528


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 175/340 (51%), Gaps = 1/340 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+ R  RAG   E+++    M + G  PD I  + +I      R   +A    + L+   
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV  Y  L+ G+ +A  +  A RV   MK  G  P+V TY+I+I + C  G++  A +
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F E+L+  CEP  IT+  L+   +     +  +++ ++M   G E DT+TYN +I   C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+  ++ A ++L S+  +GC P+  T+N++ R +   G  +   ++  +M  + C+PN V
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T++IL+         +  + L + M+E  ++P+   Y  LI  +C  G  + A +++  M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I + CL P    Y  ++  L R G+  +  E+ EK+ + G
Sbjct: 375 ISDGCL-PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 185/380 (48%), Gaps = 4/380 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ MI       + DLA    + +   N E TV T++IL+   +  G    A+  
Sbjct: 171 PDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKL 230

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  PD + ++ +I  +C++    +A     SL  +  +PD+I Y  L+R    
Sbjct: 231 LDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLS 290

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G  SE E++  EM   G +PNV T+SI+I  LCR G++  A ++   M E G +P++  
Sbjct: 291 RGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYC 350

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    +  R +   +    M   GC  D + YN ++   C+ GK + A++V   + 
Sbjct: 351 YDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLD 410

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC PN S++N +F  +   GD   A  M  K+ +   +P+ +TYN L+         D
Sbjct: 411 EVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVD 470

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             ++L  +M+     PNV +Y I++   C +   N+A + +  M E+ C +P  + Y ++
Sbjct: 471 EAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGC-QPNETTYILL 529

Query: 505 LQQLRRAGQLQKHEELVEKM 524
           ++ +  +G   +  EL   +
Sbjct: 530 IEGIGFSGLRAEAMELANSL 549



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 179/378 (47%), Gaps = 3/378 (0%)

Query: 153 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           +++N + +  +++ + +F++ M  +     V   + L++ +  +    +A      +E Y
Sbjct: 74  KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERY 133

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
           G  PD  A++ +IS   +  +   A    D +K + F PDV+ Y  ++  +C  G +  A
Sbjct: 134 G-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             +F E+     +P V TY+I+I+A    G I  A  +  EML  G EP+++T+N ++R 
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K    +K  ++   +   GC+ D ITYN L+      GK  +  K+++ M+  GC PN
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T +++   + + G V  A  +   MK+   +P+   Y+ L+  F      D+  +  +
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M  +   P++  Y  ++   C  G  + A +   ++ E  C  P  S Y  +   L  +
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGC-PPNVSSYNTLFSALWSS 431

Query: 512 GQLQKHEELVEKMVDRGF 529
           G   +  E++ K++++G 
Sbjct: 432 GDRYRALEMILKLLNQGI 449


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 235/482 (48%), Gaps = 35/482 (7%)

Query: 55  EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRH 114
           E TL  E+ H L+ +  R+         P L  D        GF     A + +PS    
Sbjct: 40  EGTLRPEEAHDLLDELQRR-------GTPVLERDLN------GFL---AALARAPS---- 79

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHF 170
               S   R G P L V + FN   +R +   V SP    Y  +++   +  + +LA  F
Sbjct: 80  ----SAACRSG-PALAV-ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAF 133

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILC 229
              +    + + +   + L++ +  A    EA+    +R  E GC PD  ++SI++  LC
Sbjct: 134 FGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193

Query: 230 RKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            + ++ +A      + +      PDV+ Y+ ++ G+ + G++++A  +F+EM   GI P+
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
             TYS V+ ALC+   + +A     +M+  G  PN+ T+NNL+  +    + ++ ++V+ 
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+R     D +T + L+   CK GK+++A  V ++M  KG NPN  ++ ++    +  G
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKG 373

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +     ++  M      P+  T+N+L++ +A     D  + +  EM ++ V+P+V TYR
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C +G  ++A +   +MI++  + P    Y  ++Q     G L K +EL+ ++++
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492

Query: 527 RG 528
            G
Sbjct: 493 NG 494



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 187/390 (47%), Gaps = 6/390 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+FV    + H +     K R  D A  F+  M ++ V     T++ L+  Y   G   E
Sbjct: 252 PDFVTYSSVVHALC----KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVR 260
           AV  F  M  +   PD +  S+++  LC+  +  EA+  FD++  K + P+V  YT ++ 
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLN 367

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+   G + +   +F  M   GI P++YT++++I A   CG + +A  +F EM + G +P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           + +T+  ++    +  + +  ++ +NQM   G   D   Y+ LI   C  G L  A +++
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + ++  G + +   F+ I   + KLG V  A  ++    ++   P  V Y++LM  +   
Sbjct: 488 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV 547

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +  L++   M    +EPN   Y  L+  YC +G  +      REM+ +K +KP + +
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML-QKGIKPSTIL 606

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           Y +++  L  AG+    +    +M + G  
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 209/429 (48%), Gaps = 12/429 (2%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           HSI P  V   +      ++G  + +    F+ +  + +   +P+++   I L G   + 
Sbjct: 318 HSILPDVVTLSMLMGSLCKYG-KIKEARDVFDTMAMKGQ---NPNVFSYTIMLNGYATKG 373

Query: 165 DLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
            L       DLM    +   + TF++L++ Y   G+  +A+  FN M ++G  PD + + 
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            VI+ LCR  +  +A   F+ + D+   PD   Y  L++G+C  G++ +A+ +  E+   
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 493

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+  ++  +S +I+ LC+ G++  A ++F   + VG  P ++ ++ LM  +    + EK 
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+V++ M   G E + + Y  L++ +CK G++++ + +   M++KG  P+   +N+I   
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + + G    A   + +M +     N  TYNI+++    ++  D  + L KE+    V+ N
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 462 VNTYRILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           + T   L TM  GM         K +   I    L P    Y +++  L + G +++ E+
Sbjct: 674 IIT---LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAED 730

Query: 520 LVEKMVDRG 528
           +   M + G
Sbjct: 731 MFSSMQNAG 739



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 37/313 (11%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   I  + +  + + +  FS ++    + G   +A + F+     G  P  + +S+++ 
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C   +  +A   FD++     EP+ +VY  LV G+C+ G I E   +FREM   GI+P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR--------------- 330
           +   Y+I+ID L   G+   A   F EM E G   N  T+N ++R               
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLF 662

Query: 331 -----VHVKAS---------------RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
                ++VK +               R E+   ++  + R G     +TY+ +I    K+
Sbjct: 663 KELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKE 722

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G +E+A  + +SM   GC P++   N + R + K  ++  A     K+ +       +T 
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTT 782

Query: 431 NILMQMFATSKST 443
            +L+ +F +SK T
Sbjct: 783 MLLVDLF-SSKGT 794



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  ++N   K+ + D        M  + ++ +   ++I++     AG    A   F+ M
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
            E G A +K  ++IV+  L + R   EA   F  L+    + ++I    ++ G  +   +
Sbjct: 631 TESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRV 690

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+ +F  +  +G+ P V TYSI+I  L + G +  A D+F+ M   GCEP+S   N++
Sbjct: 691 EEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV 750

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +R  +K +   +     +++       + +T   L+D     G   + I+ L
Sbjct: 751 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 193/390 (49%), Gaps = 8/390 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K+ + D A   +D M+S++      T++I++      G    A+  
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N++    C P  I ++I+I     +    EA    D +  +  +PD+  Y  ++RG C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  + R +++ G +P+V +Y+I++ AL   G+      +  +M    C+PN +T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    +  + E+ + +   MK  G   D  +Y+ LI   C++G+L+ AI+ L +M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+   +N +   + K G  + A  ++GK+ ++ C PN+ +YN +     +S    
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEM 503
             L +  EM  N ++P+  TY  +I+  C  G  + A++ + +M    C   P    Y +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYNI 513

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           VL    +A +++    ++E MV  G   RP
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNG--CRP 541



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y+ MI       + DLA   ++ + S N + TV T++IL+   +  G   EA+ 
Sbjct: 190 SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M   G  PD   ++ +I  +C++     A     +L+ K  EPDVI Y  L+R   
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G   E E++  +M      PNV TYSI+I  LCR G+I  A ++   M E G  P++ 
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +++ L+    +  R +  ++    M   GC  D + YN ++   CK+GK + A+++   +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC+PN+S++N +F  +   GD   A  M  +M     +P+ +TYN ++         
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   +L  +M   E  P+V TY I++  +C      +A   +  M+   C +P  + Y +
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC-RPNETTYTV 548

Query: 504 VLQQLRRAGQLQKHEELVEKMV 525
           +++ +  AG   +  EL   +V
Sbjct: 549 LIEGIGFAGYRAEAMELANDLV 570



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 168/340 (49%), Gaps = 1/340 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           +  R  R+G   E++H    M   G  PD I  + +I      R   +A    + L+   
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV  Y  L+ G+C+   I +A RV   M+     P+  TY+I+I +LC  G++  A  
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  ++L   C+P  IT+  L+   +     ++ L++ ++M   G + D  TYN +I   C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G ++ A +++ ++  KGC P+  ++N++ R +   G      ++  KM   KC+PN V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY+IL+         +  + L K M+E  + P+  +Y  LI  +C  G  + A +++  M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I + CL P    Y  VL  L + G+  +  E+  K+ + G
Sbjct: 395 ISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 4/228 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A + + LMK + +     ++  L+  + R G    A+     M   GC PD 
Sbjct: 347 GKIEE---AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ V++ LC+  +A +A   F  L +    P+   Y  +      +G+   A  +  E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   GI P+  TY+ +I  LCR G +  A ++  +M      P+ +T+N ++    KA R
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
            E  + V   M   GC  +  TY  LI+     G   +A+++ N +VR
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 7/246 (2%)

Query: 109 PSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ--FDL 166
           P+ V + I  +   R G    ++    N +    E   +PD Y     +A   R+   D+
Sbjct: 331 PNVVTYSILITTLCRDG----KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F++ M S      +  ++ ++    + G A +A+  F ++ E GC+P+  +++ + S
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446

Query: 227 ILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L        A     + + +  +PD I Y +++   CR G + EA  +  +M+     P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V TY+IV+   C+  +I  A +V   M+  GC PN  T+  L+     A    + +++ 
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566

Query: 346 NQMKRL 351
           N + R+
Sbjct: 567 NDLVRI 572


>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Glycine max]
          Length = 490

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 200/398 (50%), Gaps = 6/398 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L  F W ++RP F HS + Y  M+++ G+++  +     ++ M+   + + ++T +  +
Sbjct: 92  ALGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRDLLEEMREGGL-VNMNTVAKAM 150

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RR+V AG   +AV  F+ ++  G   +  + ++++  LC+++   +A+  F  LK    P
Sbjct: 151 RRFVGAGQWVDAVRIFDDLQALGLEKNTESMNLLLDTLCKEKFVQQAREIFLELKQHIAP 210

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   +   + GWC+   + EA    +EMK  G  P V +YS +I   C+ G  +R +++ 
Sbjct: 211 NAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELL 270

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM   GC  N IT+ ++M    KA + E+ L+V  +M+  GC  DT+ +N LI    + 
Sbjct: 271 DEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRA 330

Query: 371 GKLEDAIKVLN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL-KCEPNTV 428
           G+L+DA  V    M + G +PN ST+N +            A  +  +M++   C+P+  
Sbjct: 331 GRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDAQ 390

Query: 429 TYNILMQMFATSKSTDMVLK--LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           TY+ L++    S   D VL   L   + +  +  +++TY +LI   C     N A+    
Sbjct: 391 TYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYTLLIHGLCREDRCNWAFSLFE 450

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           EMI++  + P      ++L ++++    Q  E++ + M
Sbjct: 451 EMIDQDII-PRYRTCRLLLDEVKQKNMYQAAEKIEDLM 487



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 5/267 (1%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K+ + D A   I  MK       V ++S L++ Y + G  +      + M+  GC+ + I
Sbjct: 224 KICRVDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVI 283

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR-E 277
            ++ ++  L + ++  EA    + ++     PD + + +L+    RAG + +A  VF+ E
Sbjct: 284 TYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVE 343

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKAS 336
           M  AG+ PN  TY+ +I   C   Q  RA ++  EM   G C+P++ T++ L++   ++ 
Sbjct: 344 MPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSG 403

Query: 337 RTEKVL-QVYNQM-KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           + + VL ++ N M  +     D  TY  LI   C++ +   A  +   M+ +   P   T
Sbjct: 404 KIDGVLSEILNDMINKQHLSLDLSTYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRT 463

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDL 421
             ++   + +      A ++   MK L
Sbjct: 464 CRLLLDEVKQKNMYQAAEKIEDLMKKL 490



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/345 (17%), Positives = 140/345 (40%), Gaps = 73/345 (21%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++ +++ IL R +   + +   + +++    ++      +R +  AG   +A R+F +++
Sbjct: 111 SYDMMVDILGRMKVMEKLRDLLEEMREGGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQ 170

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G++ N  + ++++D LC+   + +A ++F E L+    PN+ TF              
Sbjct: 171 ALGLEKNTESMNLLLDTLCKEKFVQQAREIFLE-LKQHIAPNAHTF-------------- 215

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
                                N  I   CK  ++++A   +  M   G +P   +++ + 
Sbjct: 216 ---------------------NIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYSTLI 254

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL---------- 449
           +C  + G+ +  + +  +M+   C  N +TY  +M     +K  +  LK+          
Sbjct: 255 QCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCR 314

Query: 450 --------------------------KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
                                     K EM +  V PN +TY  +I+M+C       A +
Sbjct: 315 PDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALE 374

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK-HEELVEKMVDR 527
            ++EM      KP +  Y  +++   R+G++     E++  M+++
Sbjct: 375 ILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINK 419



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 5/206 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN-RM 209
           Y  ++   GK ++F+ A    + M+S         F+ L+    RAG   +A   F   M
Sbjct: 285 YTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEM 344

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGN 267
            + G +P+   ++ +IS+ C   +   A      +++    +PD   Y  L++   R+G 
Sbjct: 345 PKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGK 404

Query: 268 ISEA-ERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           I      +  +M     +  ++ TY+++I  LCR  +   A  +F EM++    P   T 
Sbjct: 405 IDGVLSEILNDMINKQHLSLDLSTYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTC 464

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRL 351
             L+    + +  +   ++ + MK+L
Sbjct: 465 RLLLDEVKQKNMYQAAEKIEDLMKKL 490


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 198/385 (51%), Gaps = 6/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+   K  +   A   ++ M  + V   V T++I+V R  RAG   EA   
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F++M E GC+ + +A++ +I+ LC+      A    + +  K +EPD I Y  ++ G CR
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA--EMLEVGCEPNS 322
            G +SEA++ F  M   G  P+V  Y+ ++DAL + G++  A  +F   +M +    P+ 
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+N L+    +  +T++ ++++  +   G   DT+TYN ++    +   +++A ++   
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           MV  GC PN +T++++     ++G++     +Y +M + +  P+ +  N ++ M   +K 
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D   K+ +EM +    P+V TY IL+   C     + A++    M++  C  P    Y 
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC-APDIVSYS 366

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDR 527
           +VL  L +  ++     L ++M++R
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIER 391



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 189/387 (48%), Gaps = 4/387 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K    + A+  ++ M S+  E    T++ ++    R G  +EA   F+ M 
Sbjct: 83  YNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMP 142

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF---DSLKDKFEPDVIVYTNLVRGWCRAGN 267
             G +PD +A++ ++  L ++ + +EA   F   D    K  PD+I Y  L+ G+CR   
Sbjct: 143 SRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEK 202

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
             EA ++F+++   G  P+  TY+ ++  L R   +  A ++F +M++ GC PN  T++ 
Sbjct: 203 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSI 262

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++  H +     + L++Y +M       D +  N +ID  CK  K++DA KVL  M + G
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T+N++   + K   V+ AH ++  M D  C P+ V+Y++++     +       
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 382

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L   M E ++ P+V T+ IL+   C  G  + A   +  M E   L  G +   + +  
Sbjct: 383 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTL-MHG 441

Query: 508 LRRAGQLQKHEELVEKMVDRGFTARPL 534
           L R  +  +   L + MV++G  A  L
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVL 468



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 170/358 (47%), Gaps = 4/358 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  +  E  V T+S ++    + G   EA+     M E G  PD   ++I++  LCR  +
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   F  + ++    + + Y  L+ G C+  NI  A ++  EM   G +P+  TY+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++  LCR G+++ A   F  M   G  P+ + +N L+    K  +  +   ++  M    
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 353 --CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                D ITYN LID  C+  K ++A+K+   ++ KG  P+  T+N I   +++  +++ 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  M+ KM D  C PN  TY+I++       +    L+L +EM E    P+V     +I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           M C     ++A+K + EM +   + P    Y ++L  L +   + K  EL   MVD G
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAV-PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 154/285 (54%), Gaps = 3/285 (1%)

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           FEPDV+ Y+ ++ G C+ G ++EA  +  EM   G+ P+V TY+I++D LCR G++  A 
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           ++F +M+E GC  N++ +N L+    K    E+  ++  +M   G E D ITYN ++   
Sbjct: 66  ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG--KMKDLKCEP 425
           C+ GK+ +A +  +SM  +G +P+   +N +   + K G V  A  ++    M D K  P
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + +TYN L+  F   + TD  +KL K++      P+  TY  ++       + + A +  
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++M++  C  P  + Y +VL    R G + +  EL E+M ++ F+
Sbjct: 246 KKMVDSGC-APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS 289



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 190/389 (48%), Gaps = 8/389 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           +PDL  Y+ +I+   +V + D A   F D++    +  TV   SIL+    R     EA 
Sbjct: 184 APDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLG-LARKSNMDEAE 242

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             F +M + GCAP+   +SIV+S  CR    +     ++ + +K F PDV++   ++   
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+A  + +A +V  EM   G  P+V TY+I++D LC+   + +AH++F+ M++ GC P+ 
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           ++++ ++    K ++      ++++M       D +T+N L+D  CK GKL++A  +L+ 
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M      P+  T   +   + +    + A R++  M +     + + +NI++        
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGK 482

Query: 443 TDMVLKLKKEM--EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
               L   K M   + E  P+V TY  L+      G  + A  Y ++M    C  P    
Sbjct: 483 LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGC-APDYVA 541

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y  ++  LR+ G+  + + L + M ++GF
Sbjct: 542 YNTLMNGLRKQGRHIQADRLTQAMKEKGF 570



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 14/225 (6%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  ++N   K  +   A    D M  R +   V TF+IL+    +AG   EA  
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWC 263
             + M E+   PD +  + ++  LCR +R  EA   F  + +K    DV+ +  ++ G C
Sbjct: 419 LLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLC 478

Query: 264 RAGNISEAERVFREM-KMAG-IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           R G +++A   F+ M K  G   P+V TY+ +++AL   G++ +A D F +M   GC P+
Sbjct: 479 REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            + +N LM    K  R  +  ++   MK  G         FL DC
Sbjct: 539 YVAYNTLMNGLRKQGRHIQADRLTQAMKEKG---------FLSDC 574



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M E   EP+V TY  +I+  C  G    A + + EM E K + P  + Y +++ +L RAG
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTE-KGVNPDVATYTIIVDRLCRAG 59

Query: 513 QLQKHEELVEKMVDRGFTA 531
           ++ + +EL  KM++RG +A
Sbjct: 60  KVDEADELFHKMIERGCSA 78


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 165/317 (52%), Gaps = 3/317 (0%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEA 271
           G AP  +A++ V+  L      S A+ FFDS L D   P+V  Y  LVR  C  G+  EA
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             V R+M+ AG  PN  TY+ ++ A CR G++ RA  +   M E G +PN +TFN+++  
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             KA R E   +V+++M + G   D ++YN L+  +CK G   +A+ V   M RKG  P+
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             TF  +   + K G++  A  +  +M++   + N +T+  L+  F      D  L   +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM +  ++P+V  Y  LI  YC +G  + A + +REM E K +KP    Y  +L    + 
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM-EAKGVKPDVVTYSTILSAYCKN 415

Query: 512 GQLQKHEELVEKMVDRG 528
           G      +L ++M++ G
Sbjct: 416 GDTHSAFQLNQQMLENG 432



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 169/325 (52%), Gaps = 2/325 (0%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F+ M   G AP+   ++I++  LC +    EA S    ++    +P+ + Y  LV  +CR
Sbjct: 145 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCR 204

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG +  AER+   M+  G++PN+ T++ V++ +C+ G++  A  VF EM++ G  P+ ++
Sbjct: 205 AGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVS 264

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+  + K   + + L V+ +M R G   D +T+  LI   CK G LE A+ ++  M 
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G   N  TF  +     K G ++ A     +M+  + +P+ V YN L+  +      D
Sbjct: 325 ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              +L +EME   V+P+V TY  +++ YC  G  ++A++  ++M+E   L P +  Y  +
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVL-PDAITYSSL 443

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           ++ L    +L     L + M+  G 
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGL 468



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 205/426 (48%), Gaps = 7/426 (1%)

Query: 88  DFTIPSLSLGF-SQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVH 146
           D ++PS    F S +S   + +  T   ++   CG  H    L VL         P  V 
Sbjct: 135 DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVT 194

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
               Y+ ++    +  + D A   +D+M+   ++  + TF+ +V    +AG   +A   F
Sbjct: 195 ----YNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVF 250

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           + M + G APD ++++ ++   C+   + EA S F  +  K   PDV+ +T+L+   C+A
Sbjct: 251 DEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKA 310

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           GN+  A  + REM+  G+Q N  T++ +ID  C+ G +  A     EM +   +P+ + +
Sbjct: 311 GNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCY 370

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+  +    R ++  ++  +M+  G + D +TY+ ++  +CK+G    A ++   M+ 
Sbjct: 371 NALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLE 430

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G  P+A T++ + R + +   +  AH ++  M  L  +P+ VTY  L+       + + 
Sbjct: 431 NGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVER 490

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            L L  EM +  V P+V TY +LI           A + + ++  E+ + P +  Y+ ++
Sbjct: 491 ALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPV-PANIKYDALM 549

Query: 506 QQLRRA 511
           +  R A
Sbjct: 550 RCCRNA 555



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 175/352 (49%), Gaps = 2/352 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+    +    T++ LV  + RAG    A    + M E G  P+ + F+ V++ +C+  R
Sbjct: 183 MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR 242

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+  FD + K+   PD + Y  LV G+C+ G   EA  VF EM   GI P+V T++ 
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTS 302

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I  +C+ G + RA  +  EM E G + N ITF  L+    K    +  L    +M++  
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            +   + YN LI+ +C  G++++A +++  M  KG  P+  T++ I     K GD + A 
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           ++  +M +    P+ +TY+ L+++    K       L K M    ++P+  TY  LI  +
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           C  G+   A     EM++   L P    Y +++  L ++ + ++ + L+ K+
Sbjct: 483 CKEGNVERALSLHDEMVKAGVL-PDVVTYSVLINGLSKSARTKEAQRLLFKL 533



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 187/369 (50%), Gaps = 17/369 (4%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  + +   V TF+ L+    +AG    AV     M E G   ++I F+ +I   C+K  
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A      ++  + +P V+ Y  L+ G+C  G + EA  + REM+  G++P+V TYS 
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++ A C+ G    A  +  +MLE G  P++IT+++L+RV  +  R      ++  M  LG
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + D +TY  LID HCK+G +E A+ + + MV+ G  P+  T++++   +SK      A 
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMF--ATSKSTDMVLK---LKKEMEENE------VEPN 461
           R+  K+   +  P  + Y+ LM+    A  KS   +LK   +K  M E +      ++ N
Sbjct: 528 RLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRN 587

Query: 462 VN----TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
            N     Y +LI  +C  G+   A  + ++M++     P S+    +++ L   G + + 
Sbjct: 588 WNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG-FAPNSTSTISLIRGLFEKGMVVEA 646

Query: 518 EELVEKMVD 526
           +++++++++
Sbjct: 647 DQVIQQLLN 655



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 155/328 (47%), Gaps = 18/328 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN    V + D A   +  M+++ V+  V T+S ++  Y + G    A     +M 
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML 429

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD I +S +I +LC ++R  +A   F ++     +PD + YT+L+ G C+ GN+ 
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVE 489

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +  EM  AG+ P+V TYS++I+ L +  +   A  +  ++      P +I ++ LM
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549

Query: 330 RVHVKASRTEKVLQVYNQ--MKRLGCEADTI--------------TYNFLIDCHCKDGKL 373
           R   + +  + VL +     MK L  EAD +               Y+ LI  HC++G +
Sbjct: 550 RC-CRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNV 608

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A+     M++ G  PN+++   + R + + G V  A ++  ++ +     +      L
Sbjct: 609 MKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKAL 668

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + +     + D VL +   M  + + P+
Sbjct: 669 IDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 210/430 (48%), Gaps = 37/430 (8%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           +FN +  +  FV   + ++ ++        F+  W F +  K + V + V +F I+++  
Sbjct: 116 YFNEMVDKG-FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGC 173

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEPDV 252
             AG   ++      + E+G +P+ + ++ +I   C+K    +A+  FF+  K     + 
Sbjct: 174 CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANE 233

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             YT L+ G  + G   +   ++ +M+  G+ PN++TY+ V++ LC+ G+   A  VF E
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDE 293

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M E G   N +T+N L+    +  +  +  +V +QMK  G   + ITYN LID  C   K
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRK 353

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           L  A+ +   +  +G +P+  T+N++     K GD +GA ++  +M++   +P+ VTY I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI--- 489
           L+  FA S + +  ++L+  MEE  + P+V+TY +LI  +C  G  N A +  + M+   
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473

Query: 490 -------------------------------EEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
                                          EEK L P  + Y  +++ L +  + ++ E
Sbjct: 474 FEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533

Query: 519 ELVEKMVDRG 528
            LVEKM+D G
Sbjct: 534 GLVEKMIDSG 543



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 198/389 (50%), Gaps = 5/389 (1%)

Query: 144 FVHSPDLYHEMINLAGKVR-QFDLAWHFID-LMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           + H+  L  ++I  +GK++ QF  +   +  L +S   +     + +++  YV++     
Sbjct: 55  YSHAQSLLLQVI--SGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDS 112

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           +++ FN M + G  P    F+ +++ +      ++   FF+  K K   DV  +  +++G
Sbjct: 113 SIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKG 172

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C AG I ++  +  E++  G  PNV  Y+ +ID  C+ G+I +A D+F EM + G   N
Sbjct: 173 CCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVAN 232

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  L+    K    ++  ++Y +M+  G   +  TYN +++  CKDG+ +DA KV +
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFD 292

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M  +G + N  T+N +   + +    N A+ +  +MK     PN +TYN L+  F   +
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVR 352

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                L L ++++   + P++ TY IL++ +C  G  + A K ++EM EE+ +KP    Y
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM-EERGIKPSKVTY 411

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +++    R+  ++K  +L   M + G T
Sbjct: 412 TILIDTFARSDNMEKAIQLRSSMEELGLT 440



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 185/373 (49%), Gaps = 4/373 (1%)

Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F+ +    EF  SP+  +Y  +I+   K  + + A      M    +     T+++L+  
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
             + G+  +    + +M+E+G  P+   ++ V++ LC+  R  +A   FD ++++    +
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           ++ Y  L+ G CR    +EA  V  +MK  GI PN+ TY+ +ID  C   ++ +A  +  
Sbjct: 303 IVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCR 362

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           ++   G  P+ +T+N L+    K   T    +V  +M+  G +   +TY  LID   +  
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            +E AI++ +SM   G  P+  T++++       G +N A R++  M + K EPN V YN
Sbjct: 423 NMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYN 482

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            ++  +    S+   L+L +EMEE E+ PNV +YR +I + C       A   + +MI+ 
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDS 542

Query: 492 KCLKPGSSVYEMV 504
             + P  S+  ++
Sbjct: 543 G-IGPSDSILNLI 554



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 191/401 (47%), Gaps = 9/401 (2%)

Query: 133 SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           S  +++T          LY  +IN   + +  D + ++ + M  +      + F+ L+  
Sbjct: 79  SLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTF 138

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD----KF 248
            V +    +    FN   +     D  +F IVI   C    A E +  FD L +     F
Sbjct: 139 VVGSSSFNQWWCFFNE-SKIKVVLDVYSFGIVIKGCCE---AGEIEKSFDLLVELREFGF 194

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P+V++YT L+ G C+ G I +A+ +F EM   G+  N +TY+++I  L + G   +  +
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFE 254

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           ++ +M E G  PN  T+N +M    K  RT+   +V+++M+  G   + +TYN LI   C
Sbjct: 255 MYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++ K  +A +V++ M   G NPN  T+N +      +  +  A  +   +K     P+ V
Sbjct: 315 REMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLV 374

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TYNIL+  F     T    K+ KEMEE  ++P+  TY ILI  +    +   A + +R  
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ-LRSS 433

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +EE  L P    Y +++      G++ +   L + MV++ F
Sbjct: 434 MEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKF 474


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 173/336 (51%), Gaps = 2/336 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           F++L+R  VR G  A A + F+ M+  G     ++F+ +IS +CR      A++    + 
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           +    PDV  Y  L++G CR G I +A  VF +M   G++PN   ++I+IDA C+ G   
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
              ++  EM E G  P+++T+N ++    +A   +    +  +M+  G   DT+TY  LI
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 422

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D +CK+ +L+ A+++  +MV +G   +  T+  +   +SK G    A R+ G+M +   E
Sbjct: 423 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 482

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+  TY +++  F         L+L KEM+    +P V TY +++  +C +G   NA   
Sbjct: 483 PDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADML 542

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +  MI    + P    Y ++L    + G++   EEL
Sbjct: 543 LNAMINIG-VSPDDITYNILLDGHCKHGKVTDIEEL 577



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 15/348 (4%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGL--AAEAVHAFNRMEEYGCAPDKIAFSIV 224
           A +  D M+SR V  TV +F+ ++    RAG    AE +H   RM E G  PD   +  +
Sbjct: 259 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLH--RRMSEAGVTPDVYTYGAL 316

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I  LCR  R  +A+  F+ +  +  +P+ +V+T L+   C+ G+      + REM+  G+
Sbjct: 317 IQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGV 376

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+  TY+ +++ LCR   +  A  +  EM   G  P+++T+  L+  + K    +  ++
Sbjct: 377 RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAME 436

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           +   M   G   D +TY  LI    K G+  DA +VL  M+  G  P+ +T+ M+     
Sbjct: 437 IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFC 496

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF---ATSKSTDMVLKLKKEMEENEVEP 460
           + GDV    R+  +M++   +P  VTYN++M  F      K+ DM+L     M    V P
Sbjct: 497 RKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL---NAMINIGVSP 553

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +  TY IL+  +C  G   +    I E+   K   P   VY  ++ ++
Sbjct: 554 DDITYNILLDGHCKHGKVTD----IEELKSAKGTVPDLGVYTSIVGEI 597



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 168/333 (50%), Gaps = 2/333 (0%)

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTN 257
           A EA   + ++ + G  P+   F++++  L R    + AQ+ FD ++ +     V+ +  
Sbjct: 221 APEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 280

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++ G CRAG++  AE + R M  AG+ P+VYTY  +I  LCR G+I  A  VF +M   G
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 340

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
            +PN++ F  L+  H K    E +L+++ +M+  G   D +TYN +++  C+   L+ A 
Sbjct: 341 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 400

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            ++  M   G  P+  T+  +     K  +++ A  +   M       + VTY  L+   
Sbjct: 401 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
           + +  +    ++  EM E  +EP+  TY ++I  +C  G      + ++EM + K  KPG
Sbjct: 461 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM-QNKGRKPG 519

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              Y +++    + GQ++  + L+  M++ G +
Sbjct: 520 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVS 552



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 152/304 (50%), Gaps = 2/304 (0%)

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            ++ R   A EA +F+  L D    P+  ++  L+R   R G ++ A+ VF EM+  G++
Sbjct: 213 GLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVR 272

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
             V +++ +I  +CR G +  A  +   M E G  P+  T+  L++   +  R E    V
Sbjct: 273 RTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGV 332

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + +M   G + + + +  LID HCK G  E  +++   M  +G  P+A T+N I   + +
Sbjct: 333 FEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR 392

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
             D+  A  +  +M+     P+TVTY  L+  +   +  DM +++K+ M    V  +  T
Sbjct: 393 ARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVT 452

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI+     G   +A + + EM+E   L+P ++ Y MV+    R G ++    L+++M
Sbjct: 453 YTALISGLSKAGRSADAERVLGEMMEAG-LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM 511

Query: 525 VDRG 528
            ++G
Sbjct: 512 QNKG 515



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 41/296 (13%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+Y    +I    +V + + A    + M  R ++     F+IL+  + + G A   + 
Sbjct: 307 TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLE 366

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M E G  PD + ++ +++ LCR R    A      ++     PD + YT L+ G+C
Sbjct: 367 LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYC 426

Query: 264 -----------------------------------RAGNISEAERVFREMKMAGIQPNVY 288
                                              +AG  ++AERV  EM  AG++P+  
Sbjct: 427 KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT 486

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY++VIDA CR G +     +  EM   G +P  +T+N +M    K  + +    + N M
Sbjct: 487 TYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAM 546

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +G   D ITYN L+D HCK GK+ D I+ L S   KG  P+   +  I   I K
Sbjct: 547 INIGVSPDDITYNILLDGHCKHGKVTD-IEELKSA--KGTVPDLGVYTSIVGEIVK 599


>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
 gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 209/414 (50%), Gaps = 19/414 (4%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVDTFSI 188
           L FF+WV+ +  F H    +  M+   G+ R  ++A +F+  ++ R+   V++    F+ 
Sbjct: 85  LRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNS 143

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+R Y  AGL  E+V  F  M++ G +P  + F+ ++SIL ++ R   A   FD ++  +
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203

Query: 249 --EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PD   +  L+ G+C+   + EA R+F++M++    P+V TY+ +ID LCR G++  A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263

Query: 307 HDVFAEMLEVGCE--PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           H+V + ML+   +  PN +++  L+R +      ++ + V++ M   G + + +TYN LI
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323

Query: 365 DCHCKDGKLEDAIKVL--NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
               +  + ++   +L   +       P+A TFN++ +     G ++ A +++ +M ++K
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-------EPNVNTYRILITMYCGM 475
             P++ +Y++L++        D    L  E+ E EV       +P    Y  +    C  
Sbjct: 384 LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN 443

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G    A K  R++++     P S  Y+ ++    R G+ +   EL+  M+ R F
Sbjct: 444 GKTKQAEKVFRQLMKRGVQDPPS--YKTLITGHCREGKFKPAYELLVLMLRREF 495



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 158/341 (46%), Gaps = 16/341 (4%)

Query: 158 AGKVRQFDLAWHFID--LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           AGKV+   +A + +   L K+ +V   V +++ LVR Y       EAV  F+ M   G  
Sbjct: 257 AGKVK---IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTNLVRGWCRAGNISEAE 272
           P+ + ++ +I  L    R  E +       D F    PD   +  L++  C AG++  A 
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE----VG---CEPNSITF 325
           +VF+EM    + P+  +YS++I  LC   +  RA  +F E+ E    +G   C+P +  +
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N +        +T++  +V+ Q+ + G + D  +Y  LI  HC++GK + A ++L  M+R
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLR 492

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +   P+  T+ ++   + K+G+   AH    +M      P   T++ ++   A  K  + 
Sbjct: 493 REFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANE 552

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
              L   M E  +  N++    ++ +         A+  +R
Sbjct: 553 SFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR 593



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 4/209 (1%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V  P  Y  +I    +  +F  A+  + LM  R     ++T+ +L+   ++ G A  A  
Sbjct: 461 VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWC 263
              RM      P    F  V++ L +++ A+E+       L+ +   ++ + T +VR   
Sbjct: 521 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLF 580

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +   ++ E+ F  +++      +     ++  LC   ++  AH +    LE     +  
Sbjct: 581 SS---AQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDID 637

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           T N ++    K  R  +   +YN++  LG
Sbjct: 638 TCNTVIEGLCKHKRHSEAFSLYNELVELG 666


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 185/384 (48%), Gaps = 2/384 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           P +YH ++  A +   F  A   ++ + +R   + V   ++++      G   EA+H   
Sbjct: 157 PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLR 216

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
            +  +GC PD ++++ V+  LC  +R    Q   + + +    P+++ +  L+   CR G
Sbjct: 217 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNG 276

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
                  V  +M   G  P++  Y+ +ID +C+ G +  AH++   M   G +PN + +N
Sbjct: 277 LFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYN 336

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L++    A R E+  ++  +M    C  D +T+N L+D  C++G ++  I++L  M+ +
Sbjct: 337 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLER 396

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC P+  T+  +     K G ++ A  +   M    C+PNT++Y I+++   +++     
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L  +M +     N  T+  LI   C  G    A + +++M+   C  P    Y  V+ 
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVID 515

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +AG+  +  EL+  MV++G +
Sbjct: 516 GLGKAGKTDEALELLNVMVNKGMS 539



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 171/352 (48%), Gaps = 7/352 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K    ++A   ++ M S  ++  V  ++ L++    A    E   
Sbjct: 294 TPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 353

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M +  C  D + F+I++   C+           + + ++   PDVI YT ++ G+C
Sbjct: 354 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFC 413

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC   +   A D+ ++M++ GC  N I
Sbjct: 414 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 473

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K GK ++A+++LN M
Sbjct: 474 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG +PN   ++ I   +S+ G +N   +M+  ++D     + V YN ++        T
Sbjct: 534 VNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET 593

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           +  ++    M  +   PN +TY ILI      G    A    +EM+ E C K
Sbjct: 594 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA----QEMLTELCSK 641



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 165/351 (47%), Gaps = 2/351 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  +VR     G  A+A+   + M   GCAP    + +++   CR      A    + L
Sbjct: 124 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 183

Query: 245 KDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +     +   NLV    C  G++ EA  + R++   G +P+V +Y+ V+  LC   + 
Sbjct: 184 HARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW 243

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  EM+ + C PN +TFN L+    +    E+V +V  QM   GC  D   Y  +
Sbjct: 244 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 303

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+G LE A ++LN M   G  PN   +N + + +           +  +M D  C
Sbjct: 304 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             + VT+NIL+  F  +   D V++L ++M E    P+V TY  +I  +C  G  + A  
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            ++ M    C KP +  Y +VL+ L  A +    E+L+ +M+ +G    P+
Sbjct: 424 LLKSMTACGC-KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 473



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 5/309 (1%)

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           ++ +++  CR  +   A+    ++     P+   Y  +VR  C  G I++A  V  EM  
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP--VPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P    Y ++++A CR G    A  V  ++   GC  +    N ++         ++
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 210

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            L +   +   GCE D ++YN ++   C   +     +++  MVR  C PN  TFN +  
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + G     H +  +M +  C P+   Y  ++         ++  ++   M    ++P
Sbjct: 271 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKP 330

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQLRRAGQLQKHEE 519
           NV  Y  L+   C    W    + + EM ++ C  P   V + +++    + G + +  E
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDC--PLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 520 LVEKMVDRG 528
           L+E+M++RG
Sbjct: 389 LLEQMLERG 397


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 184/384 (47%), Gaps = 2/384 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           P +YH ++  A +   F  A   ++ + +R   + V   ++++      G   EA+H   
Sbjct: 194 PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLR 253

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
            +  +GC PD ++++ V+  LC  +R    Q   + + +    P+++ +  L+   CR G
Sbjct: 254 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNG 313

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
                  V  +M   G  P++  Y+ +ID +C+ G +  AH++   M   G +PN + +N
Sbjct: 314 LFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYN 373

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L++    A R E+  ++  +M    C  D +T+N L+D  C++G ++  I++L  M+  
Sbjct: 374 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 433

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC P+  T+  +     K G ++ A  +   M    C+PNT++Y I+++   +++     
Sbjct: 434 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 493

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L  +M +     N  T+  LI   C  G    A + +++M+   C  P    Y  V+ 
Sbjct: 494 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVID 552

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +AG+  +  EL+  MV++G +
Sbjct: 553 GLGKAGKTDEALELLNVMVNKGMS 576



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 170/352 (48%), Gaps = 7/352 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K    ++A   ++ M S  ++  V  ++ L++    A    E   
Sbjct: 331 TPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 390

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
               M +  C  D + F+I++   C+           +  L+    PDVI YT ++ G+C
Sbjct: 391 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC 450

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC   +   A D+ ++M++ GC  N I
Sbjct: 451 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 510

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K GK ++A+++LN M
Sbjct: 511 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 570

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG +PN   ++ I   +S+ G +N   +M+  ++D     + V YN ++        T
Sbjct: 571 VNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET 630

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           +  ++    M  +   PN +TY ILI      G    A    +EM+ E C K
Sbjct: 631 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA----QEMLTELCSK 678



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 2/351 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  +VR     G  A+A+   + M   GCAP    + +++   CR      A    + L
Sbjct: 161 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 220

Query: 245 KDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +     +   NLV    C  G++ EA  + R++   G +P+V +Y+ V+  LC   + 
Sbjct: 221 HARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW 280

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  EM+ + C PN +TFN L+    +    E+V +V  QM   GC  D   Y  +
Sbjct: 281 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 340

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+G LE A ++LN M   G  PN   +N + + +           +  +M D  C
Sbjct: 341 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 400

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             + VT+NIL+  F  +   D V++L ++M E+   P+V TY  +I  +C  G  + A  
Sbjct: 401 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 460

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            ++ M    C KP +  Y +VL+ L  A +    E+L+ +M+ +G    P+
Sbjct: 461 LLKSMTACGC-KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 510


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 187/389 (48%), Gaps = 6/389 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  +    L  +++    K  + +L W   D M +  V   V T++ ++  + + G   
Sbjct: 177 RPSLLSCNSLLGDLL----KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVK 232

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A      M E GC+P+ + ++++I  LCR R   EA     S+ DK   PD+  Y  L+
Sbjct: 233 DAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILI 292

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+C      EA+ +  EM   G++P   TY+ +ID   R G I +A  +  EM+  G E
Sbjct: 293 NGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE 352

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            N I +N L+    KA + EK L++  +M   G E D+ TY+ LI+ HC+   +  A ++
Sbjct: 353 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 412

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L+ M ++   P   T+++I   + + G++ G + +  +M     +PN V Y  LM   A 
Sbjct: 413 LDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAK 472

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
               +    + + M E  + P+V  Y  LI  +C       A  Y+ EM+E + L+P + 
Sbjct: 473 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR-LRPNAH 531

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y   +    +AG+++  +    +M+  G
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCG 560



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 184/364 (50%), Gaps = 3/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A+     + SR V   V T+S+L+    R G   EA   F+ ++E G  P+   ++ +IS
Sbjct: 584 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C++    +A    + +  K   PD++ Y  L+ G C+AG I  A+ +F +++  G+ P
Sbjct: 644 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  TY+ ++D  C+    T A  +  EML  G  P++  +N ++    K  + EK L ++
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 763

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M   G  A T+++N LI+ +CK GKL++A  +L  M+ K   PN  T+  +     K 
Sbjct: 764 QEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 822

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A R++ +M++    P   TY  L+  +    +   V  L +EM    +EP+  TY
Sbjct: 823 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTY 882

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            ++I  YC  G+   A K +++ I  K +    + Y+ ++Q L +  +  +  +L+ ++ 
Sbjct: 883 YVMIDAYCREGNVMEACK-LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIG 941

Query: 526 DRGF 529
           + GF
Sbjct: 942 ESGF 945



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 174/345 (50%), Gaps = 2/345 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           F +L+  Y + G   EAV+ F   + +   P  ++ + ++  L +  +       FD + 
Sbjct: 148 FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMC 207

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
             K  PDV  YTN++   C+ GN+ +A+RV  EM   G  PN+ TY+++I  LCR   + 
Sbjct: 208 AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLD 267

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A ++   M++ G  P+  T++ L+       R+ +   +  +M  +G + + ITYN LI
Sbjct: 268 EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D   + G +E A ++ + MV  G   N   +N +   + K G +  A  +  +M +   E
Sbjct: 328 DGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE 387

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P++ TY++L++     ++     +L  EM++ ++ P V TY ++I   C  G+       
Sbjct: 388 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 447

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +REM+    LKP + VY  ++    + G++++   ++E+M ++G 
Sbjct: 448 LREMVMNG-LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 188/399 (47%), Gaps = 38/399 (9%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILV----------------RRYVRAGLAAEAV------- 203
           A+  +D MK R +  TV T+S+++                R  V  GL   AV       
Sbjct: 409 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 468

Query: 204 -HA-----------FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEP 250
            HA             RM E G  PD   ++ +I   C+ +R  EA+++  + L+ +  P
Sbjct: 469 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 528

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   Y   + G+ +AG +  A+R F EM   G+ PNV  Y+ +I+  C+ G +T A  VF
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 588

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
             +L      +  T++ L+    +  +  +   ++++++  G   +  TYN LI   CK 
Sbjct: 589 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 648

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G ++ A ++L  M  KG NP+  T+N++   + K G++  A  ++  ++     PN VTY
Sbjct: 649 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 708

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             ++  +  SK+     +L +EM    V P+   Y +++   C    +  A    +EM+E
Sbjct: 709 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +      S  +  +++   ++G+LQ+   L+E+M+++ F
Sbjct: 769 KGFASTVS--FNTLIEGYCKSGKLQEANHLLEEMIEKQF 805



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 175/385 (45%), Gaps = 43/385 (11%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+  ++R G   +A    + M   G   + I ++ +++ +C+  +  +A      +
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +K  EPD   Y+ L+ G CR  N++ A  +  EMK   + P V TYS++I+ LCRCG +
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
              + +  EM+  G +PN++ +  LM  H K  R E+   +  +M+  G   D   YN L
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 501

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   CK  ++E+A   L  M+ +   PNA T+       SK G++  A R + +M     
Sbjct: 502 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 561

Query: 424 EPN-----------------------------------TVTYNILMQMFATSKSTDMVLK 448
            PN                                     TY++L+   + +        
Sbjct: 562 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 621

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK---PGSSVYEMVL 505
           +  E++E  + PN  TY  LI+  C  G+ + A     +++EE C+K   P    Y +++
Sbjct: 622 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA----SQLLEEMCIKGINPDIVTYNILI 677

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFT 530
             L +AG++++ + L + +  RG T
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRGLT 702



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 189/418 (45%), Gaps = 37/418 (8%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +++ ++N   K  + + A   +  M  + VE    T+S+L+  + R    A A    + M
Sbjct: 357 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 416

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           ++   AP  + +S++I+ LCR        +   + + +  +P+ +VYT L+    + G +
Sbjct: 417 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 476

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            E+  +   M+  GI P+V+ Y+ +I   C+  ++  A     EMLE    PN+ T+   
Sbjct: 477 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 536

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD------------------ 370
           +  + KA   E   + +N+M   G   +   Y  LI+ HCK+                  
Sbjct: 537 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596

Query: 371 -----------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
                            GK+ +A  + + +  KG  PNA T+N +     K G+V+ A +
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M      P+ VTYNIL+     +   +    L  ++E   + PN  TY  ++  YC
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
              +   A++ + EM+  + + P + +Y ++L    +  + +K  +L ++M+++GF +
Sbjct: 717 KSKNPTAAFQLLEEML-LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS 773



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 128/260 (49%), Gaps = 2/260 (0%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +I+   K  + + A +  D ++ R +     T++ +V  Y ++     A  
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
               M   G  PD   ++++++  C++ +  +A   F  + +K     + +  L+ G+C+
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCK 786

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + EA  +  EM      PN  TY+ +ID  C+ G +  A  ++ EM E    P + T
Sbjct: 787 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 846

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+  +       +V  ++ +M   G E D +TY  +ID +C++G + +A K+ + ++
Sbjct: 847 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 906

Query: 385 RKGCNPNASTFNMIFRCISK 404
            KG   + + ++ + + + K
Sbjct: 907 VKGMPMSVAAYDALIQALCK 926



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 133/278 (47%), Gaps = 1/278 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+ +++  L+  + + G + EA  VF   K    +P++ + + ++  L +  ++     V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M      P+  T+ N++  H K    +   +V  +M   GC  + +TYN +I   C+
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
              L++AI++  SMV KG  P+  T++++            A  M  +M D+  +P  +T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN L+  F      +   ++K EM    +E N+  +  L+   C  G    A + ++EM+
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            EK ++P S  Y ++++   R   + +  EL+++M  R
Sbjct: 383 -EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/414 (20%), Positives = 182/414 (43%), Gaps = 44/414 (10%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           +  S F ++ +R   +     Y  +I+   +  +   A+     ++ + +     T++ L
Sbjct: 583 EAFSVFRFILSR-RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           +    + G   +A      M   G  PD + ++I+I  LC+      A++ FD ++ +  
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P+ + Y  +V G+C++ N + A ++  EM + G+ P+ + Y+++++  C+  +  +A D
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 309 VFAEMLEVG--------------CE--------------------PNSITFNNLMRVHVK 334
           +F EMLE G              C+                    PN +T+ +L+  + K
Sbjct: 762 LFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A    +  +++ +M+         TY  L+  +   G + +   +   MV KG  P+  T
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKD---LKCEPNTV-TYNILMQMFATSKSTDMVLKLK 450
           + ++     + G+V  A     K+KD   +K  P +V  Y+ L+Q     +    VLKL 
Sbjct: 882 YYVMIDAYCREGNVMEAC----KLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLL 937

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
            E+ E+     + T  ++   +   G+ + A + +R M++   +   +S+ ++V
Sbjct: 938 NEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 991



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 139/302 (46%), Gaps = 5/302 (1%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y  M++   K +    A+  ++ M  R V      +++++    +     +A+  F  M 
Sbjct: 708  YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 767

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
            E G A   ++F+ +I   C+  +  EA    + + +K F P+ + YT+L+   C+AG + 
Sbjct: 768  EKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 826

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            EA+R++ EM+   + P   TY+ ++      G ++    +F EM+  G EP+ +T+  ++
Sbjct: 827  EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 886

Query: 330  RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              + +     +  ++ +++   G       Y+ LI   CK  +  + +K+LN +   G  
Sbjct: 887  DAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFR 946

Query: 390  PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM---QMFATSKSTDMV 446
                T ++I R     G+++ A  +   M       NT +   L+   Q  A S+ +D +
Sbjct: 947  LGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNL 1006

Query: 447  LK 448
            LK
Sbjct: 1007 LK 1008



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 21/268 (7%)

Query: 134  FFNWVTARPEFVHSPDLYHEMINL-----------------AGKVRQFDLAWHFIDLMKS 176
              N+     +F  + DL+ EM+                   +GK+++   A H ++ M  
Sbjct: 746  ILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQE---ANHLLEEMIE 802

Query: 177  RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
            +       T++ L+    +AG+  EA   +  M+E    P    ++ ++         SE
Sbjct: 803  KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 862

Query: 237  AQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
              + F+ +  K  EPD + Y  ++  +CR GN+ EA ++  E+ + G+  +V  Y  +I 
Sbjct: 863  VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQ 922

Query: 296  ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            ALC+  +      +  E+ E G      T + + R    A   ++  +V   M + G  +
Sbjct: 923  ALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVS 982

Query: 356  DTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +T +   L+D +      ED+  +L  M
Sbjct: 983  NTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 7/172 (4%)

Query: 363 LIDCHCKDGKLEDAIKVLNSMVR--KGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           LI C  ++   +  + VL S+V+  + CN  PN+  F+M+     K+G +  A  ++   
Sbjct: 114 LIKCIIRNS--DSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGP 171

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           K+ +  P+ ++ N L+         ++  K+   M  ++V P+V TY  +I+ +C +G+ 
Sbjct: 172 KNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNV 231

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +A + + EM E+ C  P    Y +++  L RA  L +  EL   MVD+G  
Sbjct: 232 KDAKRVLLEMGEKGC-SPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLV 282


>gi|147827256|emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
          Length = 655

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 35/388 (9%)

Query: 77  PSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFN 136
           P   SNP ++P+ T               S   STVR  +  SC   +     + L FF+
Sbjct: 272 PEPLSNPIISPNST---------------SFDHSTVRQTL--SC---YANDWKRALEFFD 311

Query: 137 WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD-TFSILVRRYVR 195
           WV  +  F H+ D Y+ MI++ GK  +FDL W  I  MK+  V      TF  + +RY  
Sbjct: 312 WVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAA 371

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVI 253
           A L  EA++A+ R EE+    D+ ++S +I  LC  +   EA+  F  +S    F  DV 
Sbjct: 372 AHLVEEAMNAYYRTEEFNLR-DETSYSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVK 430

Query: 254 VYTNLVRGW--------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           +Y  ++RGW        C++G    A ++++EMK  GI+ +V  Y+ VI A+     +  
Sbjct: 431 IYNIILRGWFKNGVVEECKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDF 490

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +  VF E  EVGCEPN +T+N ++++  +  R  +   V++QM+  G   + ITY+    
Sbjct: 491 SIRVFREXKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFG 550

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           C  K  ++   ++  + M+  G  P   T+ M+ +   + G +     ++ KM++  C P
Sbjct: 551 CIEKPKQI---LRTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSP 607

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEM 453
           +   YN L+         D+  K ++EM
Sbjct: 608 DACAYNALIDALVQKGMVDLARKYEEEM 635



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 13/195 (6%)

Query: 168 WHFIDL---MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           W  + L   MK + + + V  ++ ++R    +     ++  F   +E GC P+ + ++ +
Sbjct: 454 WRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREXKEVGCEPNVVTYNTI 513

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE---RVFREMKM 280
           I +LC   R  EA   FD +++K + P+VI Y       C  G I + +   R F  M  
Sbjct: 514 IKLLCENGRIREAYGVFDQMREKGYAPNVITYH------CFFGCIEKPKQILRTFDRMIN 567

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           +G++P + TY +++    R G +     V+ +M E GC P++  +N L+   V+    + 
Sbjct: 568 SGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDL 627

Query: 341 VLQVYNQMKRLGCEA 355
             +   +M   G  A
Sbjct: 628 ARKYEEEMLAKGLSA 642



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 116/281 (41%), Gaps = 16/281 (5%)

Query: 263 CRAGNISEAERVFREMK-MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM-LEVGCEP 320
           C A +   A   F  ++   G      TY+ +ID L +  +      +   M  +    P
Sbjct: 298 CYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYP 357

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV- 379
           N +TF  + + +  A   E+ +  Y + +      +T +Y+ LID  C+   + +A ++ 
Sbjct: 358 NHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNLRDET-SYSNLIDALCEYKHVIEAEELF 416

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNG--------AHRMYGKMKDLKCEPNTVTYN 431
           L        N +   +N+I R   K G V          A ++Y +MK      + V YN
Sbjct: 417 LKESKDLVFNDDVKIYNIILRGWFKNGVVEECKSGKPWRAVKLYKEMKKKGIRLDVVAYN 476

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            +++    S+  D  +++ +E +E   EPNV TY  +I + C  G    AY    +M  E
Sbjct: 477 TVIRAIGLSEGVDFSIRVFREXKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQM-RE 535

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           K   P    Y      + +  Q+ +     ++M++ G   R
Sbjct: 536 KGYAPNVITYHCFFGCIEKPKQILR---TFDRMINSGVRPR 573


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y+ MI       + DLA   +D + S N + TV T++IL+   +  G   EA+ 
Sbjct: 186 SPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALK 245

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWC 263
             + M   G  PD   ++ +I  +C++     A     +L+ K  EPDVI Y  L+R   
Sbjct: 246 LLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALL 305

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G   E E++  +M      PNV TYSI+I  LCR G+I  A ++   M E G  P++ 
Sbjct: 306 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 365

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +++ L+    +  R +  ++    M   GC  D + YN ++   CK+GK + A+++   +
Sbjct: 366 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 425

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC+PN+S++N +F  +   GD   A  M  +M     +P+ +TYN ++         
Sbjct: 426 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMV 485

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   +L  +M   E  P+V TY I++  +C      +A   +  M+   C +P  + Y +
Sbjct: 486 DKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGC-RPNETTYTV 544

Query: 504 VLQQLRRAGQLQKHEELVEKMV 525
           +++ +  AG   +  EL   +V
Sbjct: 545 LIEGIGFAGYRAEAMELANDLV 566



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 194/390 (49%), Gaps = 8/390 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K+ + D A   +D M+S++      T++I++      G    A+  
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            +++    C P  I ++I+I     +    EA    D +  +  +PD+  Y  ++RG C+
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  + R +++ G +P+V +Y+I++ AL   G+      +  +M    C+PN +T
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    +  + E+ + +   MK  G   D  +Y+ LI   C++G+L+ AI+ L +M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+   +N +   + K G  + A  ++GK+ ++ C PN+ +YN +     +S    
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEM 503
             L +  EM  N ++P+  TY  +I+  C  G  + A++ + +M    C   P    Y +
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDM--RSCEFHPSVVTYNI 509

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           VL    +A +++   ++++ MV  G   RP
Sbjct: 510 VLLGFCKAHRIEDAIDVLDSMVGNG--CRP 537



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 168/340 (49%), Gaps = 1/340 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           +  R  R+G   E++H    M   G  PD I  + +I      R   +A    + L+   
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV  Y  L+ G+C+   I +A RV   M+     P+  TY+I+I +LC  G++  A  
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  ++L   C+P  IT+  L+   +     ++ L++ ++M   G + D  TYN +I   C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G ++ A +++ ++  KGC P+  ++N++ R +   G      ++  KM   KC+PN V
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY+IL+         +  + L K M+E  + P+  +Y  LI  +C  G  + A +++  M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I + CL P    Y  VL  L + G+  +  E+  K+ + G
Sbjct: 391 ISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 4/228 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A + + LMK + +     ++  L+  + R G    A+     M   GC PD 
Sbjct: 343 GKIEE---AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 399

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ V++ LC+  +A +A   F  L +    P+   Y  +      +G+   A  +  E
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   GI P+  TY+ +I  LCR G + +A ++  +M      P+ +T+N ++    KA R
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
            E  + V + M   GC  +  TY  LI+     G   +A+++ N +VR
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 567



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 3/208 (1%)

Query: 147 SPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD Y     +A   R+   D+A  F++ M S      +  ++ ++    + G A +A+ 
Sbjct: 361 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 420

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWC 263
            F ++ E GC+P+  +++ + S L        A     + + +  +PD I Y +++   C
Sbjct: 421 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLC 480

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R G + +A  +  +M+     P+V TY+IV+   C+  +I  A DV   M+  GC PN  
Sbjct: 481 REGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNET 540

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           T+  L+     A    + +++ N + R+
Sbjct: 541 TYTVLIEGIGFAGYRAEAMELANDLVRI 568


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 7/389 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAV 203
           +PDL  Y  +IN   K  + D A   +  M +R+ +   V T++ +V    R G    A 
Sbjct: 74  APDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRAC 133

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRG 261
                M+  G  PDK  FS +I+  C  R+  EA   +  +     ++PDV+ YT L+ G
Sbjct: 134 EMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDG 193

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           +C++GN+ +A ++   M+     PNV TYS ++  LC+ G + +A D+F  M   GC PN
Sbjct: 194 FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 253

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T+  L+     A + +    + ++M    C  DT++YN L+D +C+ G++E+A ++  
Sbjct: 254 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFK 313

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK-CEPNTVTYNILMQMFATS 440
            M  K C P+  T+  + R       +  A  +   MK     +P+ VTY+I++  ++ +
Sbjct: 314 EMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 373

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
           K      +  +EM    V PN  TY  LI   C  G  ++A + ++ M+ ++ ++P    
Sbjct: 374 KRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR-VEPSVGT 432

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +  V+  L R G + +  +L+  M   G 
Sbjct: 433 FNSVIGALCRLGDMDEAWKLLVAMAAHGL 461



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 161/349 (46%), Gaps = 39/349 (11%)

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAER 273
           C P  + ++I+I   C+  +  +A + F+ +++   P+   Y  +V G C+A   S+A  
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 274 VFREMKMA-------------------------------------GIQPNVYTYSIVIDA 296
           V +EM+                                       GI P+V TY+ V+D 
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ-MKRLGCEA 355
           LCR G++ RA ++  EM   G EP+  TF+ L+     A + ++ L++Y + +     + 
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D +TY  LID  CK G LE A+K+L  M  + C PN  T++ +   + K GD++ A  ++
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +M    C PN VTY  L+     +   D    L  EM      P+  +Y  L+  YC +
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           G    A +  +EM  + CL P    Y  +++    A +L++   L+E M
Sbjct: 303 GRIEEAKQLFKEMATKSCL-PDRITYTCLVRGFCNASRLEEARFLLENM 350



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 192/409 (46%), Gaps = 17/409 (4%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           ++L+  +W   +P+ V     Y  +I+   K    + A   + +M+ R     V T+S L
Sbjct: 173 EILTSSSW---KPDVVT----YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL 225

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF- 248
           +    +AG   +A+  F RM   GC P+ + ++ +I  LC   +   A+   D +     
Sbjct: 226 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 285

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD + Y  L+ G+CR G I EA+++F+EM      P+  TY+ ++   C   ++  A  
Sbjct: 286 PPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARF 345

Query: 309 VFAEM-LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           +   M    G +P+ +T++ ++  + +A R  +  +   +M       + +TY+ LID  
Sbjct: 346 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK G+++ A++VL +MV K   P+  TFN +   + +LGD++ A ++   M     EP  
Sbjct: 406 CKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM 465

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV-------NTYRILITMYCGMGHWNN 480
           VTY  L++ F+ +   ++  +L + M +   + +          +  LI   C     + 
Sbjct: 466 VTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDK 525

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A   + E+   +C +P       ++  L RAG+ ++  +L+  +   G 
Sbjct: 526 AMAVVEELRSREC-EPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
           C P   T+ +I     K   +  A   + KM++    PN  TYN+++     ++ T    
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAY 61

Query: 448 KLKKEMEENE-VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           ++ KEM + + V P++ TY  +I  +C  G  + A + +REM+    + P    Y  V+ 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L R G++ +  E+V +M  +G
Sbjct: 122 GLCRDGKMDRACEMVREMKLKG 143



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 10/228 (4%)

Query: 98  FSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINL 157
              + TA  I P  V + I  + G       ++   F   + AR     +   Y  +I+ 
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVA-GYSRAKRFVEAAEFIQEMIAR-NVAPNAVTYSSLIDG 404

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
             K  + D A   +  M ++ VE +V TF+ ++    R G   EA      M  +G  P 
Sbjct: 405 LCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 464

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI--------VYTNLVRGWCRAGNIS 269
            + ++ ++    R  R   A   F+ ++ K +             ++ L+RG C+A  I 
Sbjct: 465 MVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREID 524

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           +A  V  E++    +P       ++D L R G+   A  +   + +VG
Sbjct: 525 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
           ++C+P  VT+ I++  F  +      L   ++M E  V PN  TY +++   C     + 
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSK 59

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           AY+ ++EM + K + P    Y  V+    + G++ +  E++ +MV R
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTR 106


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 194/414 (46%), Gaps = 33/414 (7%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K +  D A   +D   S      V T+SIL     + G   EA      M 
Sbjct: 83  YNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 142

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             GC P+ + ++ +I  LC+  +  +A    ++L    F PDV+ YT +V G C+ G + 
Sbjct: 143 GNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLD 202

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++   M   G  P+V TY+ +++ LCR G++  AH +F EM+   C  +++ + +L+
Sbjct: 203 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 262

Query: 330 RVHVKASRTEKV------------LQVYNQM-------KRL-------------GCEADT 357
             + K+SRT++             + VYN +        RL             GC  + 
Sbjct: 263 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 322

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TYN ++D  CK GK+++A   L SM   GC P+  ++N+I   + K      A ++  +
Sbjct: 323 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 382

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M      P+ VTYN LM  F   +  D  + + K M +  V+P+  TY  LI+       
Sbjct: 383 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             +AY+ + EM+   C+    + Y  ++ +L + G L++   L++ M   G  A
Sbjct: 443 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 184/381 (48%), Gaps = 9/381 (2%)

Query: 148 PDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    I + G  ++   D A   ++ M  R    +V T++ L+    R G   EA H 
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
           F  M    C  D +A+  +++  C+  R  EAQ   D ++    P + VY  L+ G+C+ 
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--PYIDVYNALMDGYCKE 300

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + E   VF +M   G  PN+ TY+IV+D LC+ G++  A      M   GC P+ +++
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N ++    KAS+ ++  QV +QM + G   D +TYN L+   CK+ + +DA+ +L +M++
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT-VTYNILMQMFATSKSTD 444
            G +P+  T+N +   +S+   +  A+ +  +M    C  +   TYN ++          
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L L   M  + VE N  TY I I   C  G  + A   + EM     L+   S Y  V
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVS-YTTV 536

Query: 505 LQQLRRAGQLQKHEELVEKMV 525
           +  L +A QL +  +L  +MV
Sbjct: 537 IIGLCKAEQLDRASKLAREMV 557



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 182/389 (46%), Gaps = 34/389 (8%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R V   V T++IL+    +A    +A    + M + G  PD + F+ ++  LC+  +
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A S    + ++   P    Y  L+ G C+  N+  A+ +  E   +G  P+V TYSI
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           + D LC+ G+I  A ++  EM   GC PN +T+N L+    KAS+TEK  ++   +   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D +TY  ++D  CK+G+L+ A+K++  M+++GC P+  T+  +   + + G V+ AH
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 413 RMYGKMKDLKCEPNTVT--------------------------------YNILMQMFATS 440
            ++ +M    C  + +                                 YN LM  +   
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D +  + ++M      PN+ TY I++   C  G  + A+ ++  M    C+ P    
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV-PDVVS 359

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y +++  L +A + ++  +++++M+  G 
Sbjct: 360 YNIIIDGLFKASKPKEARQVLDQMIQAGI 388



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 196/453 (43%), Gaps = 73/453 (16%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +I+   K  + D A   +  M  R V     TF+ ++    +AG    A  
Sbjct: 7   APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 66

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
               M E  C P    ++ +IS LC+++    A++  D  +   F PDV+ Y+ L  G C
Sbjct: 67  LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126

Query: 264 RAGNISEAERVFREMKMAGIQPN-----------------------------------VY 288
           + G I EA  + +EM   G  PN                                   V 
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+I++D LC+ G++ +A  +   ML+ GC P+ IT+  LM    +  R ++   ++ +M
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 349 KRLGCEADTIT--------------------------------YNFLIDCHCKDGKLEDA 376
               C AD +                                 YN L+D +CK+G+L++ 
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 306

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ- 435
             V   M  +GC PN  T+N++   + K G V+ A      M    C P+ V+YNI++  
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           +F  SK  +   ++  +M +  + P+  TY  L+  +C    +++A   ++ MI+   + 
Sbjct: 367 LFKASKPKE-ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG-VD 424

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           P +  Y  ++  L +  +L    EL+ +M+  G
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 182/414 (43%), Gaps = 36/414 (8%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           D+Y+ +++   K  + D   +  + M  R     + T++I++    + G   EA      
Sbjct: 288 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 347

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M   GC PD ++++I+I  L +  +  EA+   D + +    PD + Y  L+  +C+   
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS-ITFN 326
             +A  + + M  AG+ P+  TY+ +I  L +  ++  A+++  EML  GC  ++  T+N
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM--- 383
            ++    K    ++ L + + M   G EA+T+TYN  ID  CK+G+L++A  +L+ M   
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 527

Query: 384 ------------------------------VRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
                                           KG    + TFN++    +K   ++ A  
Sbjct: 528 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 587

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M    C P+ +TYN+++         D   +L  EM    +  +  +Y +LI   C
Sbjct: 588 LLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC 647

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           G G    A + + EM    C        ++ L  LR  G+ ++  EL+ +M  +
Sbjct: 648 GQGRGKEALQVLEEMASSDCEIDDLKCRKLYL-ALRGQGRGEEAAELLRRMTTK 700


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 187/385 (48%), Gaps = 7/385 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PD+  Y+ M+       Q D A   +  M    VE    T++ L+R     G  A A+ 
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M    C PD + ++I++   C++    +A    D ++DK   PD++ Y  +V G C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G + +A    + +   G +PN  +Y+IV+  LC   +   A ++  EM + GC PN +
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    +    E  L+V  Q+ + GC  ++++YN L+   CK  K++ A+  L+ M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V +GC P+  ++N +   + + G+V+ A  +  ++KD  C P  ++YN ++     +  T
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              L+L  EM    ++P++ TY  +    C      +A +   + +++  ++P + +Y  
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK-VQDMGIRPNTVLYNA 478

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L +  +     +L   M+  G
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNG 503



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 194/386 (50%), Gaps = 4/386 (1%)

Query: 151 YHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ +I  L G+ R  + A   +D M  R     V T++IL+    +     +A+   + M
Sbjct: 161 YNTLIRGLCGRGRTAN-ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
            + GC PD + +++V++ +C++ R  +A  F  +L     EP+ + Y  +++G C A   
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 279

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +AE +  EM   G  PNV T++++I  LCR G +  A +V  ++ + GC PNS+++N L
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K  + +K +   + M   GC  D ++YN L+   C+ G+++ A+++L+ +  KGC
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   ++N +   ++K G    A  +  +M     +P+ +TY+ +          +  ++
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
              ++++  + PN   Y  +I   C     ++A      MI   C+ P  S Y ++++ L
Sbjct: 460 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM-PNESTYTILIEGL 518

Query: 509 RRAGQLQKHEELVEKMVDRGFTARPL 534
              G +++  +L++++  RG   + L
Sbjct: 519 AYEGLIKEARDLLDELCSRGVVRKSL 544



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 167/339 (49%), Gaps = 12/339 (3%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +R  VR G   EA+            PD    + +I  L    R +EA+    +      
Sbjct: 72  LRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLAACG---- 123

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PDV+ Y  +V G+C AG +  A R+  EM    ++P+ YTY+ +I  LC  G+   A  V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             EML   C P+ +T+  L+    K S  ++ +++ ++M+  GC  D +TYN +++  C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +G+++DAI+ L ++   GC PN  ++N++ + +        A  + G+M    C PN VT
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +N+L+         +  L++ +++ +    PN  +Y  L+  +C     + A  ++  M+
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              C  P    Y  +L  L R+G++    EL+ ++ D+G
Sbjct: 361 SRGCY-PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 174/349 (49%), Gaps = 7/349 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  ++    K   +  A   +D M+ +     + T++++V    + G   +A+  
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 250

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              +  YGC P+ ++++IV+  LC   R  +A+     +  K   P+V+ +  L+   CR
Sbjct: 251 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 310

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  V  ++   G  PN  +Y+ ++ A C+  ++ +A      M+  GC P+ ++
Sbjct: 311 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 370

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    ++   +  +++ +Q+K  GC    I+YN +ID   K GK ++A+++LN MV
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P+  T++ I   + +   +  A R +GK++D+   PNTV YN ++      + T 
Sbjct: 431 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 490

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
             + L   M  N   PN +TY ILI    G+  +    K  R++++E C
Sbjct: 491 SAIDLFAYMIGNGCMPNESTYTILIE---GLA-YEGLIKEARDLLDELC 535



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 46/249 (18%)

Query: 123 RHGI--PLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRN 178
           R G+  P L+VL         P++  +P+   Y+ +++   K ++ D A  F+DLM SR 
Sbjct: 310 RKGLVEPALEVLEQI------PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 363

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
               + +++ L+    R+G    AV   +++++ GCAP  I+++ VI  L +  +  EA 
Sbjct: 364 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 423

Query: 239 SFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY--------- 288
              + +  K  +PD+I Y+ +  G CR   I +A R F +++  GI+PN           
Sbjct: 424 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 483

Query: 289 --------------------------TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
                                     TY+I+I+ L   G I  A D+  E+   G    S
Sbjct: 484 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKS 543

Query: 323 ITFNNLMRV 331
           +     +R+
Sbjct: 544 LINKGAIRL 552



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 13/162 (8%)

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           + G+L++A++++ S  R    P+A T   + + +S  G    A R+        C P+ +
Sbjct: 77  RRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLAA-----CGPDVM 127

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YN ++  +  +   D   +L  EM    VEP+  TY  LI   CG G   NA   + EM
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 184

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  +C+ P    Y ++L+   +    ++  +L+++M D+G T
Sbjct: 185 LRRRCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT 225


>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 192/404 (47%), Gaps = 38/404 (9%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L  F W  +R  + H+P+ Y  M+++ GK++Q D     ++ M+  N+ + + T +  +
Sbjct: 95  ALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNL-VRLSTVAKAM 153

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RR   AG   +AV  F+ +  +    +  + ++++  LC++R+  +A++ F  LK    P
Sbjct: 154 RRLAGAGEWEDAVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLELKPHISP 213

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   +   + GWC+A  + EAE   +EMK  G +P V +YS +I + CR     + +++ 
Sbjct: 214 NTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELL 273

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M   GC PN +T+  +M    K  + E+ LQ+  +M+ +GC+ DT+ YN LI    + 
Sbjct: 274 DDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRA 333

Query: 371 GKLEDAIKVLN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           G+L +A++V    M + G  PN S                                   T
Sbjct: 334 GQLREAVRVFEVEMPKTGVPPNTS-----------------------------------T 358

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENE-VEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           YN ++ MF         L L +E+E +   +P++ TY  ++      G  ++   ++ +M
Sbjct: 359 YNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDM 418

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           + +  L    S Y +++  L RA + +    L E+MV +  T R
Sbjct: 419 VNKHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPR 462


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 2/372 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K    D A   +D +    V +    ++ L+  Y R             ME  G  P   
Sbjct: 160 KSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVG 219

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++I++  L R    S+ ++ +D +K K    DV  Y+ ++  +CR GN+  A  VF E 
Sbjct: 220 TYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDEC 279

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              G++PN  TY  +I+  C+ GQI  A  + A+M   G   N I FN ++  + +    
Sbjct: 280 VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMV 339

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           EK L++   M+++G E D  TYN L    C+  ++EDA K+L+ M  KG  PN  ++  +
Sbjct: 340 EKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTL 399

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
               +K GD+  A R++  M+     P+ VTYN+++  +  + S     + KKEME+  +
Sbjct: 400 ISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGL 459

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P++ TY  L+  +C  G  + A +   EM + +  KP    Y  ++  L + G+ ++  
Sbjct: 460 VPDIYTYAGLVHGHCVNGKVDVALRLFEEM-KHRGTKPNVVAYTALVSGLAKEGRSEEAF 518

Query: 519 ELVEKMVDRGFT 530
           +L + M+  G T
Sbjct: 519 QLYDDMLAAGLT 530



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 177/361 (49%), Gaps = 6/361 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   + R  D     +  M++R VE TV T++ILV    RAG  ++    ++ M+
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245

Query: 211 EYGCAPDKIAFSIVISILCRK---RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN 267
               A D   +S VI+  CR    RRASE   F + +    EP+   Y  L+ G+C+ G 
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEV--FDECVGHGVEPNERTYGALINGFCKIGQ 303

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           I  AE +  +M++ G+  N   ++ +ID  CR G + +A ++ A M ++G E +  T+N 
Sbjct: 304 IEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNT 363

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L     + +R E   ++ + M   G   + ++Y  LI  H K+G + +A ++   M  KG
Sbjct: 364 LACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T+N++     K G +  A R   +M+     P+  TY  L+     +   D+ L
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L +EM+    +PNV  Y  L++     G    A++   +M+    L P  ++Y +++  
Sbjct: 484 RLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAG-LTPDDTLYSVLVGS 542

Query: 508 L 508
           L
Sbjct: 543 L 543


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 192/387 (49%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA   +  M+   +E  V  ++ ++    +     +A   
Sbjct: 218 PDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFAL 277

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
           FN+ME  G  PD   ++ +IS LC   R S+A     ++ + K  P+V+ ++ L+  + +
Sbjct: 278 FNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVK 337

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE+++ EM    I P+++TYS +I+  C   ++  A  +F  M+   C PN +T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++   KA R E+ ++++ +M + G   +T+TYN LI    + G  + A K+   MV
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T++++   + K G +  A  ++  ++  K EP+  TYNI+++    +   +
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+PNV  Y  +I+ +C  G    A    REM E+  L P S  Y  +
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PDSGCYNTL 576

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G      EL+++M   GF  
Sbjct: 577 IRARLRDGDKAASAELIKEMRSCGFVG 603



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 199/400 (49%), Gaps = 7/400 (1%)

Query: 123 RHGIPL-LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
           R  +PL L VL     +   P+ V    L    +N     ++   A   +D M     + 
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSL----LNGYCHSKRISDAVALVDQMVEMGYKP 183

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
              TF+ L+        A+EAV   ++M + GC PD + +  V++ LC++     A S  
Sbjct: 184 DTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLL 243

Query: 242 DSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             + K K E DV++Y  ++ G C+  +I +A  +F +M+  GI+P+V+TY+ +I  LC  
Sbjct: 244 KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNY 303

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+ + A  + + M+E    PN +TF+ L+   VK  +  +  ++Y++M +   + D  TY
Sbjct: 304 GRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + LI+  C   +L++A  +   M+ K C PN  T+N + +   K   V     ++ +M  
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                NTVTYN L+Q    +   DM  K+ K+M  + V P++ TY IL+   C  G    
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           A   + E +++  ++P    Y ++++ + +AG+++   +L
Sbjct: 484 AL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 191/396 (48%), Gaps = 4/396 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F   V +RP  + S   ++++++   K+++FDL     + M++  +   + +++IL+  +
Sbjct: 68  FGEMVQSRP--LPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCF 125

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
            R      A+    +M + G  PD +  S +++  C  +R S+A +  D + +  ++PD 
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 185

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + +  L+ G       SEA  +  +M   G QP++ TY  V++ LC+ G I  A  +  +
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKK 245

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M +   E + + +N ++    K    +    ++N+M+  G   D  TYN LI C C  G+
Sbjct: 246 MEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGR 305

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             DA ++L++M+ +  NPN  TF+ +     K G +  A ++Y +M     +P+  TY+ 
Sbjct: 306 WSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F      D    + + M   +  PNV TY  LI  +C         +  REM  ++
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQR 424

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L   +  Y  ++Q L +AG     +++ +KMV  G
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 177/369 (47%), Gaps = 5/369 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+   K +  D A+   + M+++ +   V T++ L+      G  ++A    + M
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            E    P+ + FS +I    ++ +  EA+  +D + K   +PD+  Y++L+ G+C    +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+ +F  M      PNV TY+ +I   C+  ++    ++F EM + G   N++T+N L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   +A   +   +++ +M   G   D ITY+ L+D  CK GKLE A+ V   + +   
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N++   + K G V     ++  +     +PN + Y  ++  F      +    
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG-SSVYEMVLQQ 507
           L +EM+E+   P+   Y  LI      G    + + I+EM    C   G +S   MV+  
Sbjct: 557 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM--RSCGFVGDASTISMVINM 614

Query: 508 LRRAGQLQK 516
           L   G+L+K
Sbjct: 615 LHD-GRLEK 622



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 130/295 (44%), Gaps = 36/295 (12%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A  +F EM  +   P++  ++ ++ A+ +  +      +   M  +    +  ++N 
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    + S+    L V  +M +LG E D +T + L++ +C   ++ DA+ +++ MV  G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  TFN +   +      + A  +  +M    C+P+ VTY  ++         D+ L
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 448 KLKKEMEENEVE-----------------------------------PNVNTYRILITMY 472
            L K+ME+ ++E                                   P+V TY  LI+  
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           C  G W++A + +  MIE K + P    +  ++    + G+L + E+L ++M+ R
Sbjct: 301 CNYGRWSDASRLLSNMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 1/157 (0%)

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           KL+DAI +   MV+    P+   FN +   I+K+   +    +  +M++L+   +  +YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           IL+  F       + L +  +M +   EP++ T   L+  YC     ++A   + +M+E 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              KP +  +  ++  L    +  +   LV++MV RG
Sbjct: 180 G-YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG 215


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 202/429 (47%), Gaps = 19/429 (4%)

Query: 119 SCGVRHGI---------PLLQVLSFFNWVTARP----EFVHSPD--LYHEMINLAGKVRQ 163
           S G  HG+          L + +S+FN  T       E + +PD   Y  +++   K   
Sbjct: 62  SNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGN 121

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           +D    + + M +   E T+ T+++LV    +A     A   F  M   G  PD IA+S 
Sbjct: 122 YDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSS 181

Query: 224 VISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I  L +  R  EA+   D +  +   P  + YT++V G C+ G I EA +  +EM+   
Sbjct: 182 LIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 241

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           ++P V TYS ++      G++  A  V  EM +  C P++I++   +       R E+  
Sbjct: 242 LRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 301

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +V+  M   GC+ D  TY  +ID  CK+G +  A  VL  M +    PN   + MI    
Sbjct: 302 KVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGF 361

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME--ENEVEP 460
            K   +  A  +Y ++      P+TVTYN ++      K  D  L+L +EM+  + E+EP
Sbjct: 362 VKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEP 421

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           ++ TY ++I     +G    A+  + EMI+   + P    Y  ++Q L  AG++ +  EL
Sbjct: 422 SIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI-PDCFTYTSLIQTLAGAGKVSRAMEL 480

Query: 521 VEKMVDRGF 529
           +E+M+  G 
Sbjct: 481 LEEMLKAGI 489



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 191/372 (51%), Gaps = 19/372 (5%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAA----EAVHAFNR-MEEYGCAPDKIAFSIVI 225
           +   +S   E  V +F+IL+R     G AA    E V+A  R M+  G   +     +++
Sbjct: 17  LGFFQSSISEPNVSSFNILLR-----GFAARDDFEVVNALLREMKARGITSNGATHGVIL 71

Query: 226 SILCRKRRASEAQSFFDSLKDK----FE----PDVIVYTNLVRGWCRAGNISEAERVFRE 277
           S LC +R   +A S+F+S  ++    FE    PD + YT +V G  +AGN       + +
Sbjct: 72  SALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEK 131

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M  +  +P + TY++++D LC+  ++ RA DVF EM+  G +P+ I +++L+    KA R
Sbjct: 132 MVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGR 191

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            ++  ++ + M   G     + Y  ++   CK G++++A+K +  M R+   P   T++ 
Sbjct: 192 VDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSF 251

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           I      +G V  A  +  +M D  C P+T++Y + ++   +    +   K+ + M E  
Sbjct: 252 IVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 311

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
            +P+++TY I+I  +C  G    A   +R ++++  +KP   +Y M++    ++ +L++ 
Sbjct: 312 CKPDMHTYGIIIDNFCKEGSMAAATHVLR-LMDKAAVKPNRYIYTMIMDGFVKSSRLEEA 370

Query: 518 EELVEKMVDRGF 529
            EL ++++  G 
Sbjct: 371 LELYQRILKDGI 382



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 6/349 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD+  Y  +I+   K  + D A   +DLM +R    T   ++ +V    + G   EAV
Sbjct: 172 HKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAV 231

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                M      P    +S +++      +  EA +  + + D+   PD I YT  +   
Sbjct: 232 KTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEAL 291

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
              G   EAE+VF  M   G +P+++TY I+ID  C+ G +  A  V   M +   +PN 
Sbjct: 292 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNR 351

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             +  +M   VK+SR E+ L++Y ++ + G    T+TYN +I+  CK  K+++A+++L  
Sbjct: 352 YIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLRE 411

Query: 383 MVRKG--CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           M R+     P+  T++MI   + K+G    A  +  +M D    P+  TY  L+Q  A +
Sbjct: 412 MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 471

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
                 ++L +EM +  + P+ +TY  L+ + C     + A+  ++EM+
Sbjct: 472 GKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWDLLQEMM 519



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 4/217 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           T+ I++  + + G  A A H    M++    P++  +++++    +  R  EA   +   
Sbjct: 318 TYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI 377

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM--KMAGIQPNVYTYSIVIDALCRCG 301
           LKD   P  + Y  ++   C+   + EA  + REM  +   ++P++ TYS++I  L + G
Sbjct: 378 LKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVG 437

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
              RA D+ AEM++ G  P+  T+ +L++    A +  + +++  +M + G   D  TY 
Sbjct: 438 MEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYG 497

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            L+   C+   ++ A  +L  M+R G  PN  TF  +
Sbjct: 498 TLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 100/198 (50%), Gaps = 4/198 (2%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A H + LM    V+     +++++  +V++    EA+  + R+ + G  P  + ++ VI+
Sbjct: 335 ATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVIN 394

Query: 227 ILCRKRRASEAQSFFDSL---KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
            LC+ ++  EA      +   K++ EP ++ Y+ ++ G  + G    A  +  EM   G+
Sbjct: 395 ALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV 454

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P+ +TY+ +I  L   G+++RA ++  EML+ G  P+  T+  L+++  + S  +    
Sbjct: 455 IPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWD 513

Query: 344 VYNQMKRLGCEADTITYN 361
           +  +M R G   +  T+ 
Sbjct: 514 LLQEMMRNGHTPNEFTFK 531


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 190/368 (51%), Gaps = 4/368 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK R  D     ++ M++R V+  V +++I +R   +A    EA     +ME+ GC PD 
Sbjct: 224 GKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDV 283

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFRE 277
           +  ++VI +LC   R S+A+  F  +K   + PD + Y  L+     +G+      ++  
Sbjct: 284 VTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNA 343

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   G   N+ +Y+ V+DALC+ G++  A  VF EM E G  P   ++N+L+   +KA  
Sbjct: 344 MVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADM 403

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            ++ L+++N M   G   +  T+   I+ + K G+   AI+    M  KG  P+ +  N 
Sbjct: 404 FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANA 463

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +++ G +  A R++ ++KD+   P+T+TY ++++  + +   D  +    +M E  
Sbjct: 464 VLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETG 523

Query: 458 VEPNVNTYRILI-TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
             P+V     LI T+Y G G  N A+K   ++ E K ++P +  Y  +L  L R G++++
Sbjct: 524 CVPDVLALNSLIDTLYKG-GKGNEAWKLFHQLKEMK-IEPTNGTYNTLLSGLGREGKVKE 581

Query: 517 HEELVEKM 524
              L+E+M
Sbjct: 582 VMHLLEEM 589



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 160/363 (44%), Gaps = 7/363 (1%)

Query: 167  AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            A    +  K   V +   +++ L+R  V   L   A   F  M+  GC PD+  +++++ 
Sbjct: 757  AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 816

Query: 227  ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             + +  R  E       +  K +E   + Y  ++ G  ++  + +A  ++  +   G  P
Sbjct: 817  AMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 876

Query: 286  NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
               TY  ++D L + G++  A ++F EMLE GC+PN   +N L+  H  A  TE V Q++
Sbjct: 877  TPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIF 936

Query: 346  NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             +M   G   D  +Y  LID  C  G+L D +     ++  G  P+   +N++   + K 
Sbjct: 937  EKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKS 996

Query: 406  GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
              +  A  ++ +MK     PN  TYN L+     +       ++ +E+     +PNV TY
Sbjct: 997  ERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTY 1056

Query: 466  RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
              LI  Y   G  +NAY          C+  G S+   ++  L     +   E L  +M 
Sbjct: 1057 NALIRGYSVSGSTDNAYA------AYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMK 1110

Query: 526  DRG 528
             RG
Sbjct: 1111 RRG 1113



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 195/390 (50%), Gaps = 12/390 (3%)

Query: 147  SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            +PDL  Y+ ++    K  +F+ A+     MK + +     T   ++  +V+ GL  EA+H
Sbjct: 630  TPDLSSYNTVMYGLIKEERFEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEALH 688

Query: 205  AFNRMEEY----GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
                ++EY     C  DK +F  ++  +  K    ++  F +++  +    +      L+
Sbjct: 689  T---VKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLI 745

Query: 260  RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            R  C+     EA ++F + K  G+     +Y+ +I  L     I  A D+F EM  +GC 
Sbjct: 746  RHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 805

Query: 320  PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            P+  T+N ++    K+ R E++L+V  +M R G E+  +TYN +I    K  +LE AI +
Sbjct: 806  PDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 865

Query: 380  LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              +++ +G +P   T+  +   + K G +  A  ++ +M +  C+PN   YNIL+     
Sbjct: 866  YYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRI 925

Query: 440  SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            + +T+ V ++ ++M E  + P++ +Y +LI   C  G  N+   Y R+++E   L+P   
Sbjct: 926  AGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELG-LEPDLI 984

Query: 500  VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +Y +++  L ++ ++++   L  +M  +G 
Sbjct: 985  IYNLLIDGLGKSERIEEAVCLFNEMKKKGI 1014



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 192/406 (47%), Gaps = 10/406 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLA-GKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           + L  F     +P  VH+ +  + M+ L     R  D+A  F DLM+ + V+  V TF+ 
Sbjct: 90  EALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVF-DLMQKQIVKANVGTFAT 148

Query: 189 LVRRY-VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KD 246
           +     V+ GL +  V A   M E G + +   ++ +I  L +    +EA   + ++ +D
Sbjct: 149 VFSGVGVQGGLRSAPV-ALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVED 207

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P V  Y+ L+  + +  ++     +  EM+  G++PNVY+Y+I I  L +  +   A
Sbjct: 208 GISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEA 267

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + +  +M + GC+P+ +T   +++V   A R      V+ +MK    + D +TY  L+D 
Sbjct: 268 YQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDK 327

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
               G  +  +++ N+MV  G N N  ++  +   + ++G ++ A  ++ +MK+    P 
Sbjct: 328 CGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPE 387

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             +YN L+  F  +   D  L+L   M      PN  T+ + I  Y   G    + K I+
Sbjct: 388 QYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYY---GKSGQSLKAIQ 444

Query: 487 --EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             E ++ K + P  +    VL  L R+G+L   + +  ++ D G +
Sbjct: 445 RYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVS 490



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 164/343 (47%), Gaps = 33/343 (9%)

Query: 147  SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
             PD   Y+ +++  GK  + +        M  +  E T  T++ ++   V++    +A+ 
Sbjct: 805  GPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAID 864

Query: 205  AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
             +  +   G +P    +  ++  L +  +  +A++ F+  L+   +P+  +Y  L+ G  
Sbjct: 865  LYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHR 924

Query: 264  RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             AGN     ++F +M   GI P++ +Y+++ID LC  G++      F ++LE+G EP+ I
Sbjct: 925  IAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLI 984

Query: 324  TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
             +N L+    K+ R E+ + ++N+MK+ G   +  TYN LI    K GK  +A ++   +
Sbjct: 985  IYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEEL 1044

Query: 384  VRKGCNPNASTFNMIFR---------------------------CISKLGD---VNGAHR 413
            + KG  PN  T+N + R                            IS L D   +N A  
Sbjct: 1045 LIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEG 1104

Query: 414  MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            ++ +MK   C P+  TYN+++     S   + +LK+++E+ E+
Sbjct: 1105 LFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAED 1147



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 2/303 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K   FD A    + M +        T  + +  Y ++G + +A+  +  M+
Sbjct: 391 YNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMK 450

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD  A + V+S L R  R   A+  F  LKD    PD I YT +++   +A    
Sbjct: 451 SKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKAD 510

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA   F +M   G  P+V   + +ID L + G+   A  +F ++ E+  EP + T+N L+
Sbjct: 511 EAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLL 570

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  + ++V+ +  +M       + ITYN ++DC  K+G++  AI +L SM  KGC 
Sbjct: 571 SGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCT 630

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ S++N +   + K      A RM+ +MK +   P+  T   ++  F  +      L  
Sbjct: 631 PDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHT 689

Query: 450 KKE 452
            KE
Sbjct: 690 VKE 692



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 12/196 (6%)

Query: 132  LSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
            LS+F  +    E    PDL  Y+ +I+  GK  + + A    + MK + +   + T++ L
Sbjct: 968  LSYFRQLL---ELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSL 1024

Query: 190  VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
            +    +AG A+EA   +  +   G  P+   ++ +I           A + +D +     
Sbjct: 1025 ILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVA---- 1080

Query: 250  PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
              V + T L+ G      I+ AE +F EMK  G  P+ +TY++++DA+   G+  R  ++
Sbjct: 1081 VGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAI---GKSMRIEEM 1137

Query: 310  FAEMLEVGCEPNSITF 325
                 E+  + N +T 
Sbjct: 1138 LKVQEEIAEDLNQLTL 1153


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 186/389 (47%), Gaps = 9/389 (2%)

Query: 146 HSPDLYHEMINLAGKV--RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P        LAG V  ++ DLA         R V   + TF+ ++    R G   +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE----PDVIVYTNLV 259
                ++ +G AP    ++ +I   C+K  A         LK+  E    P  + +  L+
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+C+  N + A RVF EMK  GI  +V TY+ +I  LC  G++     +  EM ++G  
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN ITF  +++   K           + M     E D + YN LID + + GK+EDA+ V
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
             +M +KG +PN +T+N +    S+ GD   A  +  +MK+   E + VTYN+L+     
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                  +KL  EM E  +EPN  TY  +I  +C  G+  +AY+    M  EKC K  + 
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--EKCRKRANV 509

Query: 500 V-YEMVLQQLRRAGQLQKHEELVEKMVDR 527
           V Y + ++   + G++ +  +L+ +M+D+
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDK 538



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 176/372 (47%), Gaps = 7/372 (1%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y     ++G  ++ Q   A      +K+  +  +V T++ L+  Y + G A    H
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 205 A---FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
                  M E G +P  + F ++I+  C+    + A   F+ +K +     V+ Y +L+ 
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C  G + E  ++  EM+  G+ PN  T+  V+   C+ G +  A+D    M E   EP
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           + + +N L+ V+ +  + E  + V   M + G   +  TYN LI    + G    A  +L
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M  KG   +  T+N++   +   G+V  A ++  +M ++  EPN +TYN ++Q F   
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK 487

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
            +     +++  ME+     NV TY + I  +C +G  + A   + EM++ KCL P    
Sbjct: 488 GNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD-KCLVPNGIT 546

Query: 501 YEMVLQQLRRAG 512
           YE + + +   G
Sbjct: 547 YETIKEGMMEKG 558



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 45/341 (13%)

Query: 233 RASEAQSFFDSL------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           RAS+    +D+         +  P       L+ G   A  +  AE+ FR      + P+
Sbjct: 131 RASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPD 190

Query: 287 VYTYSIVIDALCRCGQITRAHDV------------------------------------- 309
           +YT++ VI  LCR GQ+ +A DV                                     
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250

Query: 310 -FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
              EM+E G  P ++TF  L+  + K S T   ++V+ +MK+ G  A  +TYN LI   C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            +GK+E+ +K++  M   G +PN  TF  + +   K G +  A+     M +   EP+ V
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YNIL+ ++      +  + +K+ M +  + PNV TY  LIT +   G W +A   + EM
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +EK ++     Y +++  L   G+++K  +L+++M + G 
Sbjct: 431 -KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470


>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 506

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 195/403 (48%), Gaps = 36/403 (8%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L   NW  +     HS D Y   +++ GK +++D    F++ M+   + +T++T + ++
Sbjct: 102 ALGVLNWAESCKGHKHSNDAYDMAVDILGKAKKWDRLKVFVERMRGDKL-VTLNTIAKIM 160

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RR+  AG   EAV  F+++ E+G   +  + ++++  LC+++R  +A+     LK    P
Sbjct: 161 RRFAGAGEWEEAVGIFDKLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLELKSHITP 220

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   +   + GWC+A  + EA    +EMK  G +P V +Y+ +I   C+  +  + +++ 
Sbjct: 221 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQSEFVKVYEML 280

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           +EM   G  PNSIT+  +M         E+ L+V  +MKR GC+ D++ YN LI    + 
Sbjct: 281 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCQPDSLFYNCLIHTLARS 340

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+LE+A +V                   FR                +M +L    NT TY
Sbjct: 341 GRLEEAERV-------------------FRV---------------EMPELGVSINTSTY 366

Query: 431 NILMQMFATSKSTDMVLKLKKEME-ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           N ++ M+      D  ++L KEME  N   P+V+TY+ L+      G      K ++EM+
Sbjct: 367 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 426

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
            +  L    S Y  ++Q+L RA   +    L E+M+ +  T R
Sbjct: 427 TKHHLSLDESTYTFLIQRLCRANICEWAYCLFEEMISQDITPR 469


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M++  V   V T++ L+R   +  +  EA+H   RM   GC PD   ++ +I 
Sbjct: 241 AVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 299

Query: 227 ILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+     EA     D++   F PD + Y +L+ G C  G++  A  +F E +  GI+P
Sbjct: 300 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 359

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++  Y+ ++  LC  G I  A  V  EM E GC P+  T+N ++    K         V 
Sbjct: 360 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 419

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N     G   D  T+N LID +CK  KL+ A++++  M   G  P+  T+N +   + K 
Sbjct: 420 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G VN  +  + +M    C PN +TYNIL++ F  S   +   K+  +M +  + P+  ++
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH--EELVEK 523
             LI  +C  G    AY   +++ EEK     +  +  ++     +G+L  H  E++ ++
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKL-EEKGYSATADTFNTLIGAF--SGKLNMHMAEKIFDE 596

Query: 524 MVDRGFTA 531
           M+ +G  A
Sbjct: 597 MLSKGHRA 604



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 174/345 (50%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  L+      G    A+  FN  +  G  PD + ++ ++  LC +     A    + +
Sbjct: 328 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 387

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++   PD+  Y  ++ G C+ GNIS+A  V  +  M G  P+V+T++ +ID  C+  ++
Sbjct: 388 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 447

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +   M E G  P++IT+N+++    KA +  +V + + +M   GC  + ITYN L
Sbjct: 448 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 507

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C+  K+E+A KV+  M ++G +P+A +FN +     + GD+ GA+ ++ K+++   
Sbjct: 508 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 567

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
                T+N L+  F+   +  M  K+  EM       +  TYR+LI   C   + + AY 
Sbjct: 568 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 627

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ EMI +K   P  S +  V+  L    ++ +   ++  MV  G
Sbjct: 628 HLVEMI-KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 671



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 171/363 (47%), Gaps = 1/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M   +V   +  F+ ++    + G   EA     ++ + G + +   ++I I 
Sbjct: 171 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 230

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            LC   R  EA    D ++    PDV+ Y  L+RG C+     EA    R M   G  P+
Sbjct: 231 GLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
            +TY+ +ID  C+   +  A ++  + +  G  P+ +T+ +L+         E+ L+++N
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           + +  G + D + YN L+   C  G +  A++V+N M  +GC+P+  T+N++   + K+G
Sbjct: 351 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 410

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +++ A  +          P+  T+N L+  +      D  L+L + M E  + P+  TY 
Sbjct: 411 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 470

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++   C  G  N   +  +EMI + C  P    Y ++++   R+ ++++  +++ KM  
Sbjct: 471 SVLNGLCKAGKVNEVNETFQEMILKGC-HPNPITYNILIENFCRSNKMEEASKVIVKMSQ 529

Query: 527 RGF 529
            G 
Sbjct: 530 EGL 532



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 161/327 (49%), Gaps = 1/327 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y  +IN        + A    +  +++ ++  +  ++ LV+     GL   A+
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
              N M E GC PD   ++IVI+ LC+    S+A     D++   + PDV  +  L+ G+
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+   +  A ++   M   GI P+  TY+ V++ LC+ G++   ++ F EM+  GC PN 
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 501

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+N L+    ++++ E+  +V  +M + G   D +++N LI   C++G LE A  +   
Sbjct: 502 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 561

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +  KG +  A TFN +    S   +++ A +++ +M       ++ TY +L+     + +
Sbjct: 562 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 621

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILI 469
            D       EM +    P+++T+  +I
Sbjct: 622 VDRAYMHLVEMIKKGFIPSMSTFGRVI 648



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 67/407 (16%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKF 248
           +R Y RAG   +AV AF RM+ + C P   A++ ++  L       +A   +   L    
Sbjct: 58  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117

Query: 249 EPDVIVYTNLVRGWC------------RA-------------------GNISEAERVFRE 277
            PD+  +T  +R +C            RA                   G+  +A ++F +
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 177

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG---------------CE--- 319
           M    + PN+  ++ V+ ALC+ G +  A  +  ++++ G               CE   
Sbjct: 178 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 237

Query: 320 ----------------PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                           P+ +T+N L+R   K S  ++ +    +M   GC  D  TYN +
Sbjct: 238 LPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 297

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +CK   +++A ++L   V KG  P+  T+  +   +   GDV  A  ++ + +    
Sbjct: 298 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 357

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+ V YN L++           L++  EM E    P++ TY I+I   C MG+ ++A  
Sbjct: 358 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 417

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + + I +  L P    +  ++    +  +L    +LVE+M + G  
Sbjct: 418 VMNDAIMKGYL-PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 463



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 1/222 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFF 241
           V TF+ L+  Y +      A+    RM EYG APD I ++ V++ LC+  + +E  ++F 
Sbjct: 431 VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQ 490

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           + +     P+ I Y  L+  +CR+  + EA +V  +M   G+ P+  +++ +I   CR G
Sbjct: 491 EMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG 550

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A+ +F ++ E G    + TFN L+             +++++M   G  AD+ TY 
Sbjct: 551 DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYR 610

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            LID  CK   ++ A   L  M++KG  P+ STF  +   ++
Sbjct: 611 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 128/312 (41%), Gaps = 8/312 (2%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI--VYTNLVRGWCRAGNISEAERVFRE 277
           A+  +I  L    R     +   S + +  P  I  +Y   +R + RAG + +A   F  
Sbjct: 17  AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 76

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M +    P    Y+ ++DAL       +AH V+  ML  G  P+  T    +R     +R
Sbjct: 77  MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 136

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
               L++   +   G     + Y  ++      G   DA ++ + M+     PN + FN 
Sbjct: 137 PHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 192

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + K GDV  A  + GK+       N  TYNI ++    +      ++L   M    
Sbjct: 193 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 252

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V TY  LI   C       A  Y+R M+ + CL P    Y  ++    +   +Q+ 
Sbjct: 253 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDFTYNTIIDGYCKISMVQEA 310

Query: 518 EELVEKMVDRGF 529
            EL++  V +GF
Sbjct: 311 TELLKDAVFKGF 322



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 3/246 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++  + +I+   K  + D A   ++ M    +     T++ ++    +AG   E    
Sbjct: 429 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 488

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           F  M   GC P+ I ++I+I   CR  +  EA      + ++   PD + +  L+ G+CR
Sbjct: 489 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 548

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++  A  +F++++  G      T++ +I A      +  A  +F EML  G   +S T
Sbjct: 549 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 608

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+    K +  ++      +M + G      T+  +I+    + ++  A+ +++ MV
Sbjct: 609 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 668

Query: 385 RKGCNP 390
           + G  P
Sbjct: 669 KIGVVP 674


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 172/327 (52%), Gaps = 4/327 (1%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLVRGW 262
             RM + GC P+  +++I++  LC   R+ EA      + D      PDV+ YT ++ G+
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G++ +A   + EM   GI PNV TYS +I ALC+   + +A +V   M++ G  PN 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+N+++  +  + + ++ +    +M   G E D +TYN L+D  CK+G+  +A K+ +S
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M ++G  P  +T+  + +  +  G +   H +   M      PN   ++IL+  +A    
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  + +  +M +  + P+  TY  +I + C  G   +A +Y  +MI+E+ L PG+ VY 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER-LSPGNIVYN 448

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  L    +  K +EL+ +M+DRG 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 178/379 (46%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K +  D A   +  M    V     T++ +V  Y  +G   EA+    +M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + ++ ++  LC+  R +EA+  FDS+ K   +P++  Y  L++G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E   +   M   GI PN Y +SI+I A  + G++ +A  VF++M + G  P+++T+  ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            +  K+ R E  ++ + QM         I YN LI   C   K + A +++  M+ +G  
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   FN I     K G V  + +++  M  +  +P+ +TY+ L+  +  +   D   KL
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    ++P+  TY  LI  YC +    +A    REM E   + P    Y ++LQ L 
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLF 595

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  +    +EL   + + G
Sbjct: 596 QTRRTAAAKELYVGITESG 614



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 188/388 (48%), Gaps = 10/388 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R ++  + T+  L++ Y   G   E    
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P+   FSI+I    ++ +  +A   F  ++ +   PD + Y  ++   C+
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + +A R F +M    + P    Y+ +I +LC   +  +A ++  EML+ G   ++I 
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+++  H K  R  +  ++++ M R+G + D ITY+ LID +C  GK+++A K+L SMV
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+N +     K+  +  A  ++ +M+     P+ +TYNI++Q    ++ T 
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVY 501
              +L   + E+  +  ++TY I++   C     NN       M +  C   L+  +  +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLC----KNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++  L + G+  + ++L   +   G 
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGL 685



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 163/378 (43%), Gaps = 36/378 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      FSIL+  Y + G   +A+  F++M + G  PD + +  VI ILC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 230 RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRG------W-------------------- 262
           +  R  +A  +F+ + D +  P  IVY +L+        W                    
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 263 ---------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                    C+ G + E+E++F  M   G++P++ TYS +ID  C  G++  A  + A M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + VG +P+ +T+N L+  + K SR E  L ++ +M+  G   D ITYN ++    +  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A ++   +   G     ST+N+I   + K    + A RM+  +     +  T T+NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +         D    L   +  N + P+V TY ++       G           M E  C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 494 LKPGSSVYEMVLQQLRRA 511
                 +  +V + L+R 
Sbjct: 721 TANSRMLNSIVRKLLQRG 738



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++ ++  + + G   +A   ++ M + G  P+ + +S +I+ LC+ +   +A     
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           S+ K+   P+   Y ++V G+C +G   EA    ++M   G++P+V TY+ ++D LC+ G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G +P   T+  L++ +       ++  + + M R G   +   ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K GK++ A+ V + M ++G NP+  T+  +   + K G V  A R + +M D 
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P  + YN L+         D   +L  EM +  +  +   +  +I  +C  G    +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            K    M+    +KP    Y  ++     AG++ +  +L+  MV  G 
Sbjct: 499 EKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 2/316 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M + G   D I F+ +I   C++ R  E++  FD + +   +PD+I Y+ L+ G+C AG 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++   M   G++P+  TY+ +I+  C+  ++  A  +F EM   G  P+ IT+N 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++   +  RT    ++Y  +   G + +  TYN ++   CK+   ++A+++  ++    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                 TFN++   + K+G  + A  ++  +      P+  TY+++ +        + + 
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L   MEEN    N      ++      G    A  Y+  MI+EK     +S   + L  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDL 768

Query: 508 LRRAGQLQKHEELVEK 523
           L      + H  L EK
Sbjct: 769 LSGGKYQEYHRFLPEK 784



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 139/302 (46%), Gaps = 7/302 (2%)

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG---IQPNVYTY 290
           A +A+  FD L  +     I   N         + + A   +  M  AG   + PN+ TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I++ + C  G++         +++ G   ++I F  +++      RT   +  V  +M 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRCISKLGD 407
           +LGC  +  +YN L+   C D + ++A+++L  M   G  C P+  ++  +     K GD
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A+  Y +M D    PN VTY+ ++     +++ D  +++   M +N V PN  TY  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++  YC  G    A  ++++M  +  ++P    Y  ++  L + G+  +  ++ + M  R
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 528 GF 529
           G 
Sbjct: 334 GL 335


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 186/387 (48%), Gaps = 4/387 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPDL  Y+ ++N   K R  D A   +  M  + V     T++ L+  Y   G   EAV 
Sbjct: 248 SPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVR 307

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWC 263
              +M   G  PD +  + +++ LC+  +  +A+  FDS+  K +  D+  Y  ++ G+ 
Sbjct: 308 VSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYA 367

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G + +   +F  M   GI P+ + ++++I A  +CG + RA  +F EM E G EP+ +
Sbjct: 368 TKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV 427

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T++ ++    +  + +  ++ +NQM   G      TY+FLI   C  G L  A  ++  M
Sbjct: 428 TYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQM 487

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + KG  P+   FN I   + KLG V  A  ++     +   PN + YN LM  +      
Sbjct: 488 MNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKM 547

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  L++   M    ++PNV  Y  L+  YC +G  +      RE++  K +KP +++Y +
Sbjct: 548 ENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL-HKGIKPSTTLYNI 606

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +L  L +AG+    +    +M + G  
Sbjct: 607 ILHGLFQAGRTVPAKVKFHEMTESGIA 633



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 206/414 (49%), Gaps = 11/414 (2%)

Query: 127 PLLQVLSFFNWVT-ARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 183
           P L V + FN V+ A    V SP L  Y  +++   +  +  L   F   +    + I  
Sbjct: 85  PALAV-ALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDT 143

Query: 184 DTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
              S L+R    A   AEA+    +RM   GC PD  ++ IV+  LC  R++ +A     
Sbjct: 144 IMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLR 203

Query: 243 SLKDKFE---PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            + +      P+ + Y  ++ G+ + G++++A  +F EM   GI P++ TY+ V++ALC+
Sbjct: 204 MMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCK 263

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
              + +A  +  +M++ G  P++ T+N+L+  +    + ++ ++V  +M   G   D +T
Sbjct: 264 ARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVT 323

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
            N L+   CK GK++DA  V +SM  KG   +  ++ ++    +  G +     ++  M 
Sbjct: 324 LNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLML 383

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
                P++  +N+L++ +A     D    +  EM E  VEP+V TY  +I   C +G  +
Sbjct: 384 SDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMD 443

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +A +   +MI++  + P  S Y  ++Q     G L K ++LV +M+++G   RP
Sbjct: 444 DAVEKFNQMIDQG-VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGM--RP 494



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 190/380 (50%), Gaps = 4/380 (1%)

Query: 151 YHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  M+N  A K    DL   F +LM S  +      F++L++ Y + G+   A   FN M
Sbjct: 359 YKIMLNGYATKGCLVDLTELF-NLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEM 417

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E G  PD + +S VI+ LCR  +  +A   F+ + D+   P +  Y  L++G+C  G++
Sbjct: 418 REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDL 477

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A+ +  +M   G++P++  ++ +I+ LC+ G++  A ++F   + +G  PN + +N L
Sbjct: 478 LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL 537

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           M  +    + E  L+V++ M   G + + + Y  L++ +CK G++++ + +   ++ KG 
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+ + +N+I   + + G    A   + +M +     +  TY+I++     +  +D  + 
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L KE+    V+ ++ T  I+I     +     A K +   I    L P    Y +++  L
Sbjct: 658 LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEA-KDLFASISRSGLVPSVVTYSIMMTNL 716

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            + G +++ +++   M + G
Sbjct: 717 IKEGLVEEADDMFSSMENAG 736


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 193/390 (49%), Gaps = 8/390 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K+ + D A   +D M+S++      T++I++      G    A+  
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N++    C P  I ++I+I     +    EA    D +  +  +PD+  Y  ++RG C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  + R +++ G +P+V +Y+I++ AL   G+      +  +M    C+PN +T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    +  + E+ + +   MK  G   D  +Y+ LI   C++G+L+ AI+ L +M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+   +N +   + K G  + A  ++GK+ ++ C PN+ +YN +     +S    
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEM 503
             L +  EM  N ++P+  TY  +I+  C  G  + A++ + +M    C   P    Y +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYNI 513

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           VL    +A +++    ++E MV  G   RP
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNG--CRP 541



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y+ MI       + DLA   ++ + S N + TV T++IL+   +  G   EA+ 
Sbjct: 190 SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWC 263
             + M   G  PD   ++ +I  +C++     A     +L+ K  EPDVI Y  L+R   
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALL 309

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G   E E++  +M      PNV TYSI+I  LCR G+I  A ++   M E G  P++ 
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +++ L+    +  R +  ++    M   GC  D + YN ++   CK+GK + A+++   +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC+PN+S++N +F  +   GD   A  M  +M     +P+ +TYN ++         
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   +L  +M   E  P+V TY I++  +C      +A   +  M+   C +P  + Y +
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC-RPNETTYTV 548

Query: 504 VLQQLRRAGQLQKHEELVEKMV 525
           +++ +  AG   +  EL   +V
Sbjct: 549 LIEGIGFAGYRAEAMELANDLV 570



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 167/340 (49%), Gaps = 1/340 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           +  R  R+G   E++H    M   G  PD I  + +I      R   +A    + L+   
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV  Y  L+ G+C+   I +A RV   M+     P+  TY+I+I +LC  G++  A  
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  ++L   C+P  IT+  L+   +     ++ L++ ++M   G + D  TYN +I   C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G ++ A +++ ++  KG  P+  ++N++ R +   G      ++  KM   KC+PN V
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY+IL+         +  + L K M+E  + P+  +Y  LI  +C  G  + A +++  M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I + CL P    Y  VL  L + G+  +  E+  K+ + G
Sbjct: 395 ISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 4/228 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A + + LMK + +     ++  L+  + R G    A+     M   GC PD 
Sbjct: 347 GKIEE---AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ V++ LC+  +A +A   F  L +    P+   Y  +      +G+   A  +  E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   GI P+  TY+ +I  LCR G +  A ++  +M      P+ +T+N ++    KA R
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
            E  + V   M   GC  +  TY  LI+     G   +A+++ N +VR
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 7/246 (2%)

Query: 109 PSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ--FDL 166
           P+ V + I  +   R G    ++    N +    E   +PD Y     +A   R+   D+
Sbjct: 331 PNVVTYSILITTLCRDG----KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F++ M S      +  ++ ++    + G A +A+  F ++ E GC+P+  +++ + S
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446

Query: 227 ILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L        A     + + +  +PD I Y +++   CR G + EA  +  +M+     P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V TY+IV+   C+  +I  A +V   M+  GC PN  T+  L+     A    + +++ 
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566

Query: 346 NQMKRL 351
           N + R+
Sbjct: 567 NDLVRI 572


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 2/346 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T + LV+    A    E ++   +M+E G  P   A++ ++ + CR+++A EA+   + +
Sbjct: 232 THAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEM 291

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            D    P  +  T +V  +CR G +S A RVF  MK+ G +PNV+TY+ ++   C  G++
Sbjct: 292 FDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKV 351

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  +  +M E G EP+ +T+N L+R        E   ++   M+  G  AD  TYN L
Sbjct: 352 YKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVL 411

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK GK+++A  + + +  +G  PN+ TFN +   + K G  + A     KM    C
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGC 471

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+T TY+  ++    +K +   L    EM + +V+P+   Y I+I       ++  A +
Sbjct: 472 APDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATR 531

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              +M+   C  P    Y   ++     G+L + E +V +M   G 
Sbjct: 532 IWGQMVSLGC-SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGI 576



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 170/348 (48%), Gaps = 6/348 (1%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           T  T++ L+R   R      A    + M   G  PD   F+ +I   CR ++   AQ  F
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLF 187

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           D +  + F  D + Y  L+ G+C  G + EA  +FRE++    QP++YT++ ++  LC  
Sbjct: 188 DKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDA 243

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +      +  +M E+G  P +  +  L+ +  +  + E+  ++ N+M   G     +T 
Sbjct: 244 RRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTC 303

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             +++ +C++G++  A++V  SM  KGC PN  T+N + +    +G V  A  +  +M++
Sbjct: 304 TAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE 363

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              EP+ VTYN+L++        +   +L + ME N +  +  TY +LI   C  G  + 
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A   + + +E + ++P S  +  V+  L + G+       +EKMV  G
Sbjct: 424 ACS-LFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 179/378 (47%), Gaps = 11/378 (2%)

Query: 115 VIEKSCGVR---HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
           +++  C  R    G+ +LQ +    W   RP    +   Y  +++L  + ++ + A   +
Sbjct: 236 LVKGLCDARRGEEGLYMLQKMKELGW---RP----ATRAYAALVDLWCREQKAEEAEKML 288

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           + M    +     T + +V  Y R G  + AV  F  M+  GC P+   ++ ++   C  
Sbjct: 289 NEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNV 348

Query: 232 RRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
            +  +A +  D +++   EPDV+ Y  L+RG C  G+I  A R+ R M+  G+  + YTY
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTY 408

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +++IDALC+ G++  A  +F  +   G  PNS+TFN ++    K  + +       +M  
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVS 468

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            GC  DT TY+  I+  CK     + +  ++ M++K   P+   + ++   + K  +   
Sbjct: 469 AGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGL 528

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A R++G+M  L C P+ VTY   ++ +           +  EM++  +  +   Y  LI 
Sbjct: 529 ATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLID 588

Query: 471 MYCGMGHWNNAYKYIREM 488
            +  +G  ++A   ++ M
Sbjct: 589 GHTSIGKTDHAVTILKHM 606



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 173/404 (42%), Gaps = 41/404 (10%)

Query: 162 RQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           R+ DL  A  ++ LM          TF+ L+  Y R      A   F++M   G + D +
Sbjct: 141 RRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAV 200

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG------------------ 261
           +++ +I   C   R  EA   F  L+   +PD+  +  LV+G                  
Sbjct: 201 SYAALIEGFCETGRVDEALELFRELE---QPDMYTHAALVKGLCDARRGEEGLYMLQKMK 257

Query: 262 -----------------WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
                            WCR     EAE++  EM   G+ P   T + V++A CR G+++
Sbjct: 258 ELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMS 317

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  VF  M   GCEPN  T+N +++      +  K + + +QM+  G E D +TYN LI
Sbjct: 318 GAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLI 377

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
              C DG +E A ++L  M   G   +  T+N++   + K G V+ A  ++  ++     
Sbjct: 378 RGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIR 437

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN+VT+N ++         D+     ++M      P+  TY   I   C          +
Sbjct: 438 PNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSF 497

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I EM+ +K +KP +  Y +V+ +L +         +  +MV  G
Sbjct: 498 IDEML-QKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLG 540



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 142/311 (45%), Gaps = 32/311 (10%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P    Y  L+R  CR  ++  A+R    M  +G +P+ +T++ +I   CR  Q+  A D+
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 310 F---------------AEMLEVGCE----------------PNSITFNNLMRVHVKASRT 338
           F               A ++E  CE                P+  T   L++    A R 
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRG 246

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           E+ L +  +MK LG    T  Y  L+D  C++ K E+A K+LN M   G  P A T   +
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                + G ++GA R++  MK   CEPN  TYN ++Q F         + L  +M E  V
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP+V TY +LI   C  GH  +A++ +R ++E   L      Y +++  L + G++ +  
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLR-LMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 519 ELVEKMVDRGF 529
            L + +  RG 
Sbjct: 426 SLFDGLEYRGI 436



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 177/433 (40%), Gaps = 67/433 (15%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ M+     V +   A   +D M+   VE  V T+++L+R     G    A      ME
Sbjct: 338 YNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLME 397

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G A D+  ++++I  LC+  +  EA S FD L+ +   P+ + +  ++ G C+ G   
Sbjct: 398 GNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFD 457

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRC----------------------------- 300
            A     +M  AG  P+ YTYS  I+ LC+                              
Sbjct: 458 VACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVI 517

Query: 301 ---------GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
                    G  TR   ++ +M+ +GC P+ +T+   +R +    R  +   V  +MK+ 
Sbjct: 518 DRLFKERNYGLATR---IWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM-------------- 397
           G   D + YN LID H   GK + A+ +L  M      PN  TF +              
Sbjct: 575 GIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDV 634

Query: 398 ------IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
                 +++ I +L DV     ++  MK      +   Y  +++ F+  +  D V  L  
Sbjct: 635 PLKTTSVWKTI-ELADV---FELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVS 690

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M+E+++  N + Y  L+  +C +  + +A+  +  MI    L P    Y+ +L      
Sbjct: 691 HMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFL-PNLISYQYLLSGFTAE 749

Query: 512 GQLQKHEELVEKM 524
           GQ  + +E+   +
Sbjct: 750 GQADRAKEIFRGL 762



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 155/417 (37%), Gaps = 67/417 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  + D A    D ++ R +     TF+ ++    + G    A     +M 
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMV 467

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----------------------- 247
             GCAPD   +S  I  LC+ + + E  SF D +  K                       
Sbjct: 468 SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527

Query: 248 -------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                          PDV+ YT  VR +C  G + EAE V  EMK  GI  +   Y+ +I
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITF----------NNLMRVHVKASRTEK---- 340
           D     G+   A  +   M  V   PN  TF               V +K +   K    
Sbjct: 588 DGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIEL 647

Query: 341 --VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
             V +++  MK+    +    Y  +++   ++ +L++   +++ M       N   +  +
Sbjct: 648 ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCE-------PNTVTYNILMQMFATSKSTDMVLKLKK 451
             C  KL       RMY     L C        PN ++Y  L+  F      D   ++ +
Sbjct: 708 VNCFCKL-------RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFR 760

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            +   E   +   ++I+I      GH +  +  I  + + KC KP    Y M+ ++L
Sbjct: 761 GLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKC-KPSDETYAMLTEEL 816



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 123/257 (47%), Gaps = 6/257 (2%)

Query: 273 RVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           R+F  M   G   P   TY+ +I ALCR   +  A    + M+  G  P++ TFN+L+  
Sbjct: 114 RLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILG 173

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           + +  + +    ++++M   G   D ++Y  LI+  C+ G++++A+++   + +     +
Sbjct: 174 YCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTH 233

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           A+    +  C ++ G+  G + M  KMK+L   P T  Y  L+ ++   +  +   K+  
Sbjct: 234 AALVKGL--CDARRGE-EGLY-MLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLN 289

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM +N + P   T   ++  YC  G  + A +    M  + C +P    Y  ++Q     
Sbjct: 290 EMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGC-EPNVWTYNAMVQGFCNV 348

Query: 512 GQLQKHEELVEKMVDRG 528
           G++ K   L+++M + G
Sbjct: 349 GKVYKAMALLDQMRECG 365


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 181/363 (49%), Gaps = 19/363 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y ++I       + + A+   + MK   +  +V T++IL+  + +AGL  +A 
Sbjct: 449 FVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQAR 508

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGW 262
           + F+ M    C P+ + ++ +I    + R+  +A   F+  L +  +P+V+ YT L+ G 
Sbjct: 509 NWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGH 568

Query: 263 CRAGNISEAERVFREMKMAGIQ-----------------PNVYTYSIVIDALCRCGQITR 305
           C+AG I +A +++  M+   I+                 PN+ TY  ++D LC+  ++  
Sbjct: 569 CKAGQIDKACQIYARMQ-GDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEE 627

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           AH++   M   GCEPN I ++ L+    K  + E   +V+ +M   G   +  TY+ LI+
Sbjct: 628 AHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLIN 687

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              K+ +L+  +KVL+ M+   C PN   +  +   + K+G    A+R+  KM+++ C P
Sbjct: 688 SLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYP 747

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N +TY  ++  F      +  L+L ++M      PN  TYR+LI   C  G  + A++ +
Sbjct: 748 NVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLL 807

Query: 486 REM 488
            EM
Sbjct: 808 DEM 810



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 53/379 (13%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
           A  A++ M + G   +K+  S     LC   +  +A      +  K F PD   Y+ ++ 
Sbjct: 402 AEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIG 461

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
             C A  + +A  +F EMK  GI P+VYTY+I+ID+ C+ G I +A + F EML   C P
Sbjct: 462 FLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTP 521

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL------- 373
           N +T+ +L+  ++KA +     +++  M   G + + +TY  LID HCK G++       
Sbjct: 522 NVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIY 581

Query: 374 --------------------------------------------EDAIKVLNSMVRKGCN 389
                                                       E+A ++L++M   GC 
Sbjct: 582 ARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCE 641

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN   ++ +     K G +  A  ++ KM +    PN  TY+ L+      K  D+VLK+
Sbjct: 642 PNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKV 701

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M EN   PNV  Y  +I   C +G    AY+ + +M E  C  P    Y  ++    
Sbjct: 702 LSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCY-PNVITYTAMIDGFG 760

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G++++  EL   M  +G
Sbjct: 761 KIGKIEQCLELYRDMCSKG 779



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 185/440 (42%), Gaps = 46/440 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINL--AGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + FF W + +  + H+P +Y+ +I L     V    ++  F+  ++  + E+     + L
Sbjct: 117 VEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFL 176

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI---------------------- 227
           +++  R G+   A+    R++++G       ++ +I +                      
Sbjct: 177 IQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGF 236

Query: 228 -------------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
                        LC+  R  +A S  +  K++F PD + Y  +V G C A    EA  +
Sbjct: 237 RMDGCTLGCFAYSLCKAGRCGDALSLLE--KEEFVPDTVFYNRMVSGLCEASLFQEAMDI 294

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
              M+     PNV TY I++      GQ+ R   + + M+  GC PN   FN+L+  + K
Sbjct: 295 LDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCK 354

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRKGC 388
           +       +++ +M + GC+   + YN  I   C + +      LE A K  + M+  G 
Sbjct: 355 SRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGV 414

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             N    +   RC+   G  + A  +  +M      P+  TY+ ++     +   +    
Sbjct: 415 VLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFL 474

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L +EM++N + P+V TY ILI  +C  G    A  +  EM+ + C  P    Y  ++   
Sbjct: 475 LFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNC-TPNVVTYTSLIHAY 533

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            +A ++    +L E M+  G
Sbjct: 534 LKARKVFDANKLFEMMLLEG 553



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 38/319 (11%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  + + A      M  R     + T+S L+    +       +   ++M
Sbjct: 646 VYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKM 705

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
            E  C P+ + ++ +I  LC+  +  EA      +++    P+VI YT ++ G+ + G I
Sbjct: 706 LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKI 765

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM--------------- 313
            +   ++R+M   G  PN  TY ++I+  C  G +  AH +  EM               
Sbjct: 766 EQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKI 825

Query: 314 --------------LEVGCEPNSITFNNLMRV----HVKASRTEKVLQVYNQMKRLG--C 353
                         L+   E  S+   +L R+     +KA R E  L +  ++       
Sbjct: 826 IEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLA 885

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
            A+   Y  LI+      K++ A ++  SM+ K   P  STF  + + ++++G    A +
Sbjct: 886 VANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQ 945

Query: 414 MYGKMKDLKCE--PNTVTY 430
           +   +  + C    N V Y
Sbjct: 946 LSDSICQMVCHVCSNFVNY 964



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/378 (20%), Positives = 153/378 (40%), Gaps = 26/378 (6%)

Query: 165 DLAWHF----IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           DL+ H+      L+ S   + + D  SI     +R G  AE  +   +         +++
Sbjct: 48  DLSQHYAFLRTSLLNSATTQTSNDALSI--SNAIRTGFGAETQNFLRQFR------GRLS 99

Query: 221 FSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNLVRGWC--RAGNISEAERVFR 276
             +V+ ++   +       FF   S +  +    +VY  L+   C     N   + +   
Sbjct: 100 EPLVVEVMNLVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLM 159

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           +++    +      + +I   CR G    A +    + + G + +  T+N L++V ++A 
Sbjct: 160 QIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRAD 219

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           + +    V+ +M   G   D  T        CK G+  DA+ +L    ++   P+   +N
Sbjct: 220 KLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLE---KEEFVPDTVFYN 276

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +   + +      A  +  +M+ + C PN VTY IL+             ++   M   
Sbjct: 277 RMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTE 336

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL------QQLRR 510
              PN   +  L+  YC    ++ AYK  ++MI+  C +PG  +Y + +      ++L  
Sbjct: 337 GCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGC-QPGYLLYNIFIGSICSNEELPG 395

Query: 511 AGQLQKHEELVEKMVDRG 528
           +  L+  E+   +M+D G
Sbjct: 396 SDLLELAEKAYSEMLDLG 413



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 118/268 (44%), Gaps = 15/268 (5%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           +L+VLS     +  P  V    +Y +MI+   KV + + A+  +  M+       V T++
Sbjct: 698 VLKVLSKMLENSCTPNVV----IYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYT 753

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            ++  + + G   + +  +  M   GCAP+ I + ++I+  C      EA    D +K  
Sbjct: 754 AMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQT 813

Query: 248 FEPDVI-VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           + P  I  Y  ++ G+ R    S    +  E+      P    Y I+ID   + G++  A
Sbjct: 814 YWPRHISSYRKIIEGFNREFITSIG--LLDELSENESVPVESLYRILIDNFIKAGRLEGA 871

Query: 307 HDVFAEM-----LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            ++  E+     L V    N   + +L+     AS+ +K  ++Y  M       +  T+ 
Sbjct: 872 LNLLEEISSSPSLAVA---NKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFV 928

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            LI    + GK ++A+++ +S+ +  C+
Sbjct: 929 HLIKGLTRVGKWQEALQLSDSICQMVCH 956


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 186/380 (48%), Gaps = 38/380 (10%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
           T++ ++  Y + G+  +A          G  PD+  +  +++  C+     +A + F D 
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L     P +IVY  L++G C+ G I  A ++  EM   G +P+++TY+++I+ LC+ G +
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A+ +  + +  GC P+  T+N L+  + +  + +  +++ N+M   G   D ITYN L
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI--------------------- 402
           ++  CK  K E+ +++  +M  KGC PN  T+N I   +                     
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 403 --------------SKLGDVNGAHRMY-GKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                          K+GD++GA+ ++ G  K       T TYNI++  F+   +  M L
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMAL 701

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L  EM++N  +P+  TYR+LI  +C  G+ N  YK++ E I EK   P  + +  VL  
Sbjct: 702 RLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENI-EKGFIPSLTTFGRVLNC 760

Query: 508 LRRAGQLQKHEELVEKMVDR 527
           L    ++Q+   ++  MV +
Sbjct: 761 LCVEHKVQEAVGIIHLMVQK 780



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 166/356 (46%), Gaps = 2/356 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
             D +  R V   + TF+I ++   + G    AV     +   G  PD + ++ VI  LC
Sbjct: 317 LFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLC 376

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           RK R  EA+     +    FEP+   Y +++ G+C+ G + +A R+ ++    G +P+ +
Sbjct: 377 RKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEF 436

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY  +++  C+ G   +A  VF + L  G  P+ I +N L++   +       LQ+ N+M
Sbjct: 437 TYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEM 496

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              GC+ D  TYN +I+  CK G L DA  ++   + KGC P+  T+N +     +   +
Sbjct: 497 AEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKL 556

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +  +M      P+ +TYN L+     +  ++ V+++ K M E    PN+ TY  +
Sbjct: 557 DSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTI 616

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           I   C     N A   + EM + K L P    +  ++    + G L     L   M
Sbjct: 617 IESLCNSKKVNEAVDLLGEM-KSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM 671



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 182/381 (47%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N+  +   F+ A      MK + VE  V T++I ++ + R G    A+     M 
Sbjct: 193 YNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMP 252

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
             GC  + +A+  V++          A+  FD  L+    PDV  +  LV   C+ G + 
Sbjct: 253 VLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVL 312

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E+ER+F ++   G+ PN++T++I I  LC+ G + RA  +   +   G  P+ +T+N ++
Sbjct: 313 ESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVI 372

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               + SR  +  +  ++M   G E +  TYN +ID +CK G + DA ++L   V KG  
Sbjct: 373 CGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFK 432

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  +     + GD + A  ++         P+ + YN L++           L+L
Sbjct: 433 PDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQL 492

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM E   +P++ TY ++I   C MG  ++A   I + I + C+ P    Y  ++    
Sbjct: 493 MNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCI-PDIFTYNTLVDGYC 551

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           R  +L    ELV +M  +G T
Sbjct: 552 RQLKLDSAIELVNRMWSQGMT 572



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 153/318 (48%), Gaps = 2/318 (0%)

Query: 176 SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
            + +  ++  ++ L++   + GL   A+   N M E GC PD   ++++I+ LC+    S
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522

Query: 236 EAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           +A     D++     PD+  Y  LV G+CR   +  A  +   M   G+ P+V TY+ ++
Sbjct: 523 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           + LC+  +     ++F  M E GC PN IT+N ++     + +  + + +  +MK  G  
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-GCNPNASTFNMIFRCISKLGDVNGAHR 413
            D +++  LI   CK G L+ A  +   M ++   +   +T+N+I    S+  ++  A R
Sbjct: 643 PDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALR 702

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++ +MK   C+P+  TY +L+  F  + + +   K   E  E    P++ T+  ++   C
Sbjct: 703 LFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLC 762

Query: 474 GMGHWNNAYKYIREMIEE 491
                  A   I  M+++
Sbjct: 763 VEHKVQEAVGIIHLMVQK 780



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 184/392 (46%), Gaps = 5/392 (1%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV--DTFSILVRRYVRAG 197
            +  F H+   Y  M+   G   +F+   + +  M+S N++ T+    +   +R Y R G
Sbjct: 111 TKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS-NLDNTLLEGVYVEAMRFYGRKG 169

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYT 256
              EAV  F RM+ + C P   +++ +++IL      ++A   +  +KD K E DV  YT
Sbjct: 170 KIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYT 229

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
             ++ +CR G    A R+ R M + G   N   Y  V+      G   RA ++F EMLE 
Sbjct: 230 IRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLEC 289

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
              P+  TFN L+    K     +  ++++++ + G   +  T+N  I   CK+G L+ A
Sbjct: 290 CLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRA 349

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +++L  + R+G  P+  T+N +   + +   V  A     KM +   EPN  TYN ++  
Sbjct: 350 VRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDG 409

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           +          ++ K+      +P+  TY  L+  +C  G  + A    ++ +  K L+P
Sbjct: 410 YCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL-GKGLRP 468

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              VY  +++ L + G +    +L+ +M ++G
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 157/344 (45%), Gaps = 11/344 (3%)

Query: 66  LIKDHHRKNPNPSSNSNPSLNPDFTI---PSLSLGFSQISTAHSISPSTVRH--VIEKSC 120
           ++KD   K   P   +  SL   F     P  ++   +      + PS + +  +I+  C
Sbjct: 422 ILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
                +P LQ+++       +P+       Y+ +IN   K+     A H I    ++   
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIW----TYNLIINGLCKMGCLSDANHLIGDAITKGCI 537

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
             + T++ LV  Y R      A+   NRM   G  PD I ++ +++ LC+  ++ E    
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI 597

Query: 241 FDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F ++ +K   P++I Y  ++   C +  ++EA  +  EMK  G+ P+V ++  +I   C+
Sbjct: 598 FKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCK 657

Query: 300 CGQITRAHDVFAEM-LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
            G +  A+ +F  M  +      + T+N ++    +    +  L+++++MK+ GC+ D  
Sbjct: 658 VGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNY 717

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           TY  LID  CK G +    K L   + KG  P+ +TF  +  C+
Sbjct: 718 TYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 1/276 (0%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           VY   +R + R G I EA   F  M +    P+VY+Y+ +++ L   G   +AH V+  M
Sbjct: 157 VYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM 216

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            +   E +  T+   ++   +  R    L++   M  LGC ++ + Y  ++    + G  
Sbjct: 217 KDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDN 276

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A ++ + M+     P+ +TFN +   + K G V  + R++ K+      PN  T+NI 
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +Q      S D  ++L   +    + P+V TY  +I   C       A + + +M+    
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG- 395

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +P    Y  ++    + G +     +++  V +GF
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGF 431



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 119/291 (40%), Gaps = 76/291 (26%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++     + G  RQ  L  A   ++ M S+ +   V T++ L+    +   + E +  
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI 597

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M E GCAP+ I ++ +I  LC  ++ +EA      +K K   PDV+ +  L+ G+C+
Sbjct: 598 FKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCK 657

Query: 265 AG------------------------------------NISEAERVFREMKMAGIQPNVY 288
            G                                    N+  A R+F EMK  G  P+ Y
Sbjct: 658 VGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNY 717

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY ++ID  C+ G + + +    E +E G  P+  TF  ++                   
Sbjct: 718 TYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVL------------------- 758

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
                           +C C + K+++A+ +++ MV+K   P+  T N IF
Sbjct: 759 ----------------NCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIF 791


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M++  V   V T++ L+R   +  +  EA+H   RM   GC PD   ++ +I 
Sbjct: 240 AVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 298

Query: 227 ILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+     EA     D++   F PD + Y +L+ G C  G++  A  +F E +  GI+P
Sbjct: 299 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 358

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++  Y+ ++  LC  G I  A  V  EM E GC P+  T+N ++    K         V 
Sbjct: 359 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 418

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N     G   D  T+N LID +CK  KL+ A++++  M   G  P+  T+N +   + K 
Sbjct: 419 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G VN  +  + +M    C PN +TYNIL++ F  S   +   K+  +M +  + P+  ++
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH--EELVEK 523
             LI  +C  G    AY   +++ EEK     +  +  ++     +G+L  H  E++ ++
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKL-EEKGYSATADTFNTLIGAF--SGKLNMHMAEKIFDE 595

Query: 524 MVDRGFTA 531
           M+ +G  A
Sbjct: 596 MLSKGHRA 603



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 174/345 (50%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  L+      G    A+  FN  +  G  PD + ++ ++  LC +     A    + +
Sbjct: 327 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 386

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++   PD+  Y  ++ G C+ GNIS+A  V  +  M G  P+V+T++ +ID  C+  ++
Sbjct: 387 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 446

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +   M E G  P++IT+N+++    KA +  +V + + +M   GC  + ITYN L
Sbjct: 447 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 506

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C+  K+E+A KV+  M ++G +P+A +FN +     + GD+ GA+ ++ K+++   
Sbjct: 507 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 566

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
                T+N L+  F+   +  M  K+  EM       +  TYR+LI   C   + + AY 
Sbjct: 567 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 626

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ EMI +K   P  S +  V+  L    ++ +   ++  MV  G
Sbjct: 627 HLVEMI-KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 670



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 171/363 (47%), Gaps = 1/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M   +V   +  F+ ++    + G   EA     ++ + G + +   ++I I 
Sbjct: 170 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 229

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            LC   R  EA    D ++    PDV+ Y  L+RG C+     EA    R M   G  P+
Sbjct: 230 GLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
            +TY+ +ID  C+   +  A ++  + +  G  P+ +T+ +L+         E+ L+++N
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           + +  G + D + YN L+   C  G +  A++V+N M  +GC+P+  T+N++   + K+G
Sbjct: 350 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 409

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +++ A  +          P+  T+N L+  +      D  L+L + M E  + P+  TY 
Sbjct: 410 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 469

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++   C  G  N   +  +EMI + C  P    Y ++++   R+ ++++  +++ KM  
Sbjct: 470 SVLNGLCKAGKVNEVNETFQEMILKGC-HPNPITYNILIENFCRSNKMEEASKVIVKMSQ 528

Query: 527 RGF 529
            G 
Sbjct: 529 EGL 531



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 161/327 (49%), Gaps = 1/327 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y  +IN        + A    +  +++ ++  +  ++ LV+     GL   A+
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
              N M E GC PD   ++IVI+ LC+    S+A     D++   + PDV  +  L+ G+
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+   +  A ++   M   GI P+  TY+ V++ LC+ G++   ++ F EM+  GC PN 
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 500

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+N L+    ++++ E+  +V  +M + G   D +++N LI   C++G LE A  +   
Sbjct: 501 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 560

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +  KG +  A TFN +    S   +++ A +++ +M       ++ TY +L+     + +
Sbjct: 561 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 620

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILI 469
            D       EM +    P+++T+  +I
Sbjct: 621 VDRAYMHLVEMIKKGFIPSMSTFGRVI 647



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 67/407 (16%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKF 248
           +R Y RAG   +AV AF RM+ + C P   A++ ++  L       +A   +   L    
Sbjct: 57  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116

Query: 249 EPDVIVYTNLVRGWC------------RA-------------------GNISEAERVFRE 277
            PD+  +T  +R +C            RA                   G+  +A ++F +
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 176

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG---------------CE--- 319
           M    + PN+  ++ V+ ALC+ G +  A  +  ++++ G               CE   
Sbjct: 177 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 236

Query: 320 ----------------PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                           P+ +T+N L+R   K S  ++ +    +M   GC  D  TYN +
Sbjct: 237 LPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 296

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +CK   +++A ++L   V KG  P+  T+  +   +   GDV  A  ++ + +    
Sbjct: 297 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 356

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+ V YN L++           L++  EM E    P++ TY I+I   C MG+ ++A  
Sbjct: 357 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 416

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + + I +  L P    +  ++    +  +L    +LVE+M + G  
Sbjct: 417 VMNDAIMKGYL-PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 462



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 1/222 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFF 241
           V TF+ L+  Y +      A+    RM EYG APD I ++ V++ LC+  + +E  ++F 
Sbjct: 430 VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQ 489

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           + +     P+ I Y  L+  +CR+  + EA +V  +M   G+ P+  +++ +I   CR G
Sbjct: 490 EMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG 549

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A+ +F ++ E G    + TFN L+             +++++M   G  AD+ TY 
Sbjct: 550 DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYR 609

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            LID  CK   ++ A   L  M++KG  P+ STF  +   ++
Sbjct: 610 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 128/312 (41%), Gaps = 8/312 (2%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI--VYTNLVRGWCRAGNISEAERVFRE 277
           A+  +I  L    R     +   S + +  P  I  +Y   +R + RAG + +A   F  
Sbjct: 16  AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 75

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M +    P    Y+ ++DAL       +AH V+  ML  G  P+  T    +R     +R
Sbjct: 76  MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 135

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
               L++   +   G     + Y  ++      G   DA ++ + M+     PN + FN 
Sbjct: 136 PHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 191

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + K GDV  A  + GK+       N  TYNI ++    +      ++L   M    
Sbjct: 192 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 251

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V TY  LI   C       A  Y+R M+ + CL P    Y  ++    +   +Q+ 
Sbjct: 252 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDFTYNTIIDGYCKISMVQEA 309

Query: 518 EELVEKMVDRGF 529
            EL++  V +GF
Sbjct: 310 TELLKDAVFKGF 321



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 3/246 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++  + +I+   K  + D A   ++ M    +     T++ ++    +AG   E    
Sbjct: 428 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 487

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           F  M   GC P+ I ++I+I   CR  +  EA      + ++   PD + +  L+ G+CR
Sbjct: 488 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 547

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++  A  +F++++  G      T++ +I A      +  A  +F EML  G   +S T
Sbjct: 548 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 607

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+    K +  ++      +M + G      T+  +I+    + ++  A+ +++ MV
Sbjct: 608 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 667

Query: 385 RKGCNP 390
           + G  P
Sbjct: 668 KIGVVP 673


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 184/372 (49%), Gaps = 2/372 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M++   K  QF      I  M+ R V   V T +++V    RAG    A+   + M   G
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
             P  + ++ V+  L R  R  +A+  F ++      PDV  +  L+ G+CRAG + EA 
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R ++EM+   + P+V ++S +I    R G++  A +   EM E G  P+ + +  ++   
Sbjct: 285 RFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGF 344

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +A    + L+V ++M   GC  D +TYN L++  CK+ +L DA ++LN M  +G  P+ 
Sbjct: 345 CRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDL 404

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  +     + G++  A + +  + D +  P+ VTYN L+             +L  +
Sbjct: 405 CTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDD 464

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M   E+ PN  TY ILI  +C  G  +NA+ ++ EM+  K + P    Y  +++   R+G
Sbjct: 465 MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV-NKGIVPNIMTYNSIIKGYCRSG 523

Query: 513 QLQKHEELVEKM 524
            + K ++ + KM
Sbjct: 524 NVSKGQQFLPKM 535



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 187/380 (49%), Gaps = 4/380 (1%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    + +  + R  D+  A   ID M S+ ++  + T++ +++  +R G   +A   
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
           F  M+  G APD  +F+++I   CR     EA  F+  ++  +  PDV+ ++ L+  + R
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A    REM+  G+ P+   Y++VI   CR G +  A  V  EM+  GC P+ +T
Sbjct: 312 RGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K  R     ++ N+MK  G   D  T+  LI  +C+DG +E A++  +++ 
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +   P+  T+N +   + + GD+  A+ ++  M   +  PN VTY+IL+         D
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
                  EM    + PN+ TY  +I  YC  G+ +   +++ +M  +K + P    Y  +
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVM-PDLITYNTL 550

Query: 505 LQQLRRAGQLQKHEELVEKM 524
           +    + G++ +   L++ M
Sbjct: 551 IHGYVKEGKMHEAFNLLKIM 570



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 187/387 (48%), Gaps = 4/387 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+    + + G  R  +L  A  F   M+ R V   V +FS L+  + R G    A  
Sbjct: 261 APDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAE 320

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
               M E+G  PD + +++VI   CR     EA    D +      PDV+ Y  L+ G C
Sbjct: 321 YLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLC 380

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   +S+AE +  EMK  G+ P++ T++ +I   CR G I +A   F  + +    P+ +
Sbjct: 381 KERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+    +     K  ++++ M       + +TY+ LID HC+ G++++A   L+ M
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG  PN  T+N I +   + G+V+   +   KM+  K  P+ +TYN L+  +      
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
                L K ME   V+P+  TY ++I+ +   G+   A  ++ + +  + ++P    Y  
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEA-DWVYKKMGARGIEPDRYTYMS 619

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++     AG  +K  +L ++M+ +G  
Sbjct: 620 MINGHVVAGNSKKSFQLHDEMLQKGLA 646



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 178/372 (47%), Gaps = 41/372 (11%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT 185
           L + L F+  +  R     +PD+  +  +I L  +  + D A  ++  M+   +      
Sbjct: 280 LEEALRFYKEMRGRRV---TPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVI 336

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ------- 238
           +++++  + RAGL  EA+   + M  +GC PD + ++ +++ LC++RR S+A+       
Sbjct: 337 YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK 396

Query: 239 ----------------------------SFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
                                        FFD++ D +  PD++ Y  L+ G CR G++ 
Sbjct: 397 ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLG 456

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  ++ +M    I PN  TYSI+ID+ C  GQ+  A     EM+  G  PN +T+N+++
Sbjct: 457 KANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           + + ++    K  Q   +M+      D ITYN LI  + K+GK+ +A  +L  M  +   
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ 576

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A T+NMI    S  G++  A  +Y KM     EP+  TY  ++     + ++    +L
Sbjct: 577 PDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636

Query: 450 KKEMEENEVEPN 461
             EM +  + P+
Sbjct: 637 HDEMLQKGLAPD 648



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 166/381 (43%), Gaps = 43/381 (11%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS----EAQSFF 241
           F +L+R Y ++    EA  AF  + ++      I  +   ++L    RA      A ++ 
Sbjct: 92  FDLLIRTYTQSRKPREAFEAFRLLLDHRVP---IPAAASNALLAALSRAGWPHLTADAYR 148

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
             L    E +      +V  +C+     E + V  EM+   + P+V T+++++DA  R G
Sbjct: 149 LVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAG 208

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A  +   M+  G +P  +T+N++++  ++  R +K  +V+  M   G   D  ++N
Sbjct: 209 DVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFN 268

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH------RMY 415
            LI   C+ G+LE+A++    M  +   P+  +F+ +    ++ G+++ A       R +
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328

Query: 416 GKMKD-----------------------------LKCEPNTVTYNILMQMFATSKSTDMV 446
           G M D                               C P+ VTYN L+      +     
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +L  EM+E  V P++ T+  LI  YC  G+   A ++  + I ++ L+P    Y  ++ 
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF-DTISDQRLRPDIVTYNTLID 447

Query: 507 QLRRAGQLQKHEELVEKMVDR 527
            + R G L K  EL + M  R
Sbjct: 448 GMCRQGDLGKANELWDDMHSR 468



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 36/210 (17%)

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           E +T T N ++  +CK  +  +   V++ M ++   P+  T N++     + GDV  A  
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215

Query: 414 MYGKMKDLKCEPNTVTY-----------------------------------NILMQMFA 438
           +   M     +P  VTY                                   N+L+  F 
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
            +   +  L+  KEM    V P+V ++  LI ++   G  ++A +Y+REM  E  L P  
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM-REFGLMPDG 334

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +Y MV+    RAG + +   + ++MV  G
Sbjct: 335 VIYTMVIGGFCRAGLMLEALRVRDEMVAFG 364


>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 210/435 (48%), Gaps = 16/435 (3%)

Query: 88  DFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQ--------VLSFFNWVT 139
           DF I  + +G S+     S+    V + I+ S  + +   LLQ         L  F W  
Sbjct: 41  DFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVY--KLLQRFKDDWKSALGVFRWAE 98

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           +   F H+PDLY  +I+  GK +Q       ++ MK   + +T+DT +  +RR+  AG  
Sbjct: 99  SLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARL-VTLDTVAKAMRRFAGAGQW 157

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLV 259
             AV  F+ +E YG   +  + ++++  LC++++  +A+  +  LK    P+   +   +
Sbjct: 158 ENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFI 217

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            GWC+   I EA     EMK  G +P V +YS +I   C      + +++  EM   GC 
Sbjct: 218 HGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCP 277

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            N IT+  +M    K+   E+ LQ+  +MK  G E DT+ YN LI    + GK+ +AI V
Sbjct: 278 ANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHV 337

Query: 380 LN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQ-M 436
               M  K   PN ST+N +     +      A ++  +M K   C+P+  TY  L++  
Sbjct: 338 FEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSC 397

Query: 437 FATSKST-DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           F T K+  D+   L + + ++ +  +++TY +LI   C     + AY+   +MI +  +K
Sbjct: 398 FRTGKTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQD-IK 456

Query: 496 PGSSVYEMVLQQLRR 510
           P     +++L + ++
Sbjct: 457 PRYLTCQLLLDEFKQ 471


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 192/419 (45%), Gaps = 44/419 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A+  +D M+ R +   V   + +++   +AG   +A+  F  + 
Sbjct: 33  YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA 92

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNI 268
              C PD I F+I++  L +  R  EA   F+S+    +  P+V+ YT ++ G C+ G +
Sbjct: 93  GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE---------------- 312
             A  +   M   G  PNV TYS++++ LC+ G+  +   +  E                
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 313 -------------------MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
                              M+  GC P  +T+N+LM +  ++ + ++  ++   M   GC
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN---- 409
             D I YN +I   C+D +L+DA  +L  MV   C P+  T++ I   + K   V+    
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 410 --GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
              A  +   MK   C PN  TY ++++    ++ +   L L + M ++EV P+++++ +
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +I   C     + AYK    M E +C KP    Y  ++  L + G++ K   + E MV+
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSEREC-KPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 174/349 (49%), Gaps = 7/349 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  L+    +AG   +A    + M + G  P     + VI  LC+  R  +A  +F ++
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG-IQPNVYTYSIVIDALCRCGQ 302
              K  PD+I +  LV    ++G + EA ++F  M  +    PNV TY+ VI+ LC+ G+
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + RA ++   M E GC PN IT++ L+    KA RT+K   +  +M R G + D I YN 
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L++  CK  +L++A++++  M+R GC P   T+N +     +   V+ A R+   M +  
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C P+ + YN ++         D    L K+M      P+V TY  +I   C     +  +
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADW 331

Query: 483 KY-----IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           K      I EM+++    P +  Y +V++ L RA + Q+   L+ +M+D
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 217/474 (45%), Gaps = 57/474 (12%)

Query: 105 HSISPSTVRH--VIEKSCGV-RHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAG 159
             I P    H  VI+  C   R G      L +F  V        +PD+  ++ +++   
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFG----DALGYFKTVAGTK---CTPDIITFNILVDALV 111

Query: 160 KVRQFDLAWHFIDLMKSRNVEI-TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           K  + + A+   + M + +  +  V T++ ++    + G    A+   + M E GC P+ 
Sbjct: 112 KSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNV 171

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           I +S+++  LC+  R  +  +    +  + F+PDVI+Y  L+ G C++  + EA  + + 
Sbjct: 172 ITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQL 231

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M  +G  P V TY+ +++  CR  Q+ RA  +   M E GC P+ I +N ++    + +R
Sbjct: 232 MIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG------KLEDAIKVLNSMVRKGCNPN 391
            +    +  QM    C  D ITY+ +ID  CKD       KLE A ++L  M + GC PN
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351

Query: 392 AST-----------------------------------FNMIFRCISKLGDVNGAHRMYG 416
           A T                                   F+M+   + K  D++ A++++G
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFG 411

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M + +C+PN V Y  L+   +     D  +++ + M E+   P V TY  ++   CG+G
Sbjct: 412 MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVG 470

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               A + +  MI ++C   G+S Y  +++ L R   +++  EL + +  +GF 
Sbjct: 471 RIEEAVRMVEGMIHKECFPDGAS-YGALIRGLCRVSCVEEAYELFQAVEAKGFA 523



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 4/302 (1%)

Query: 225 ISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           +++L R  +  +A   F   +++  P+   Y +L+ G C+AG + +A  +  EM+  GI 
Sbjct: 5   LNLLVRAGQHGQAVQLFR--EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIP 62

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P V  ++ VI  LC+ G+   A   F  +    C P+ ITFN L+   VK+ R E+  Q+
Sbjct: 63  PGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122

Query: 345 YNQMKRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           +  M     C  + +TY  +I+  CKDGKL+ AI++L+ M   GC PN  T++++   + 
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLC 182

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G  +    +  +M     +P+ + YN L+     S+  D  L+L + M  +   P V 
Sbjct: 183 KAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV 242

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY  L+ ++C     + A++ I+ M E  C  P    Y  V+  L R  +L   + L+++
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGC-PPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 524 MV 525
           MV
Sbjct: 302 MV 303



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 162/352 (46%), Gaps = 10/352 (2%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y+ ++N   K R+ D A   + LM       TV T++ L+  + R+     A   
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
              M E GC PD I ++ VI+ LCR  R  +AQ+    +   +  PDVI Y+ ++ G C+
Sbjct: 264 IQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323

Query: 265 AGNIS------EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
              +        A  +   MK  G  PN  TY++VI+ LCR  +  +A  +   M++   
Sbjct: 324 DWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV 383

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+  +F+ ++    K+   +   +++  M    C+ + + Y  LID   K G+++ A++
Sbjct: 384 VPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVR 443

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           V   MV +   P  +T+N +   +  +G +  A RM   M   +C P+  +Y  L++   
Sbjct: 444 VFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLC 502

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
                +   +L + +E       V  Y +L+   C     ++A+    ++IE
Sbjct: 503 RVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 2/226 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + + A   +++MK         T+++++    RA  + +A+    RM +    PD  +FS
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFS 391

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           +VI  LC+      A   F  + ++  +P+ + Y  L+ G  + G + +A RVF E+ + 
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVE 450

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
             +P V TY+ V+D LC  G+I  A  +   M+   C P+  ++  L+R   + S  E+ 
Sbjct: 451 SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEA 510

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
            +++  ++  G   +   YN L++  CK  +L DA  V N ++  G
Sbjct: 511 YELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 84/202 (41%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    + R+   A   +  M    V   + +FS+++    ++     A   F  M 
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           E  C P+ +A++ +I  L +     +A   F+ + + F P V  Y +++ G C  G I E
Sbjct: 415 ERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEE 474

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A R+   M      P+  +Y  +I  LCR   +  A+++F  +   G       +N L+ 
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534

Query: 331 VHVKASRTEKVLQVYNQMKRLG 352
              K  R      V N++   G
Sbjct: 535 ELCKKKRLSDAHGVANKLIEAG 556



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 15/163 (9%)

Query: 380 LNSMVRKG-------------CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           LN +VR G             C PN  T+  +   + K G ++ A+ +  +M+D    P 
Sbjct: 5   LNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
              +N +++    +      L   K +   +  P++ T+ IL+      G    A++   
Sbjct: 65  VAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124

Query: 487 EM-IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            M    +CL P    Y  V+  L + G+L +  EL++ M + G
Sbjct: 125 SMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETG 166


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 176/345 (51%), Gaps = 2/345 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    ++M S+     V T+SIL+    + G    AV   + MEE GCAP+ + +S ++ 
Sbjct: 332 ATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLH 391

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR     +A++  D +  K F  +   Y  ++   C+ G + +A R+ +EMK  G +P
Sbjct: 392 SFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKP 451

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++ TY+ +I  LC    +  A  +F  ++E G   N IT+N L+   ++  R ++ L++ 
Sbjct: 452 DICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLA 511

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M   GC+ D I+YN LI   CK+G ++ ++ +L  MV KG  PN  ++NM+   + K 
Sbjct: 512 SEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKA 571

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V  A  +  +M +    P+ VTYN L+        T   L L +++    V P++ TY
Sbjct: 572 GKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTY 631

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            ILI+ +C +   ++A   + + I    + P    + M++Q   R
Sbjct: 632 NILISWHCKVRLLDDAAMLLDKAISGG-IVPNERTWGMMVQNFVR 675



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 187/389 (48%), Gaps = 8/389 (2%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+ V    + H ++   G       A   +D M        V+TF+ LV      G   E
Sbjct: 210 PDAVLYQTVIHALVAQGGVAE----AAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVRE 265

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           A    +RM   GC P  + +  ++  LCR R+A EA +    L    E +V++   ++RG
Sbjct: 266 AARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP---EVNVVMLNTVIRG 322

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
               G ++ A  ++  M   G  P+V+TYSI++  LC+ G+   A  +  EM E GC PN
Sbjct: 323 CLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPN 382

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T++ L+    +    +    + +QM   G   ++  YN +I   CKDGKL+ A +++ 
Sbjct: 383 IVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQ 442

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M  +GC P+  T+N +   +     +  A  ++  + +     N +TYN L+     + 
Sbjct: 443 EMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNG 502

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                L+L  EM  +  + +V +Y  LI   C  G+ + +   + EM+  K +KP +  Y
Sbjct: 503 RWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMV-TKGIKPNNFSY 561

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            M++ +L +AG+++   EL ++M+++G T
Sbjct: 562 NMLINELCKAGKVRDALELSKEMLNQGLT 590



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 7/331 (2%)

Query: 200 AEAVHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTN 257
             A+H  ++M   +  +P   ++++V+S L R    ++A   +   L+D+  P    +  
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
             R  CR G   +A  + R M   G  P+   Y  VI AL   G +  A  +  EML +G
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
           C  +  TFN+L+       R  +  ++ ++M   GC    +TY FL+   C+  + ++A 
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC 302

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            +L  +       N    N + R     G +  A  +Y  M    C P+  TY+ILM   
Sbjct: 303 AMLGRLPEV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                    +++  EMEE    PN+ TY  L+  +C  G W++A   + +M+  K     
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQML-AKGFSMN 417

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           S  Y  ++  L + G+L +   LV++M  +G
Sbjct: 418 SQGYNGIIYALCKDGKLDQATRLVQEMKSQG 448



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    K  + D A   +  MKS+  +  + T++ ++       L  EA H F  + 
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G   + I ++ +I  L R  R  E      + L    + DVI Y  L++  C+ GN+ 
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            +  +  EM   GI+PN ++Y+++I+ LC+ G++  A ++  EML  G  P+ +T+N L+
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K   T   L +  ++       D +TYN LI  HCK   L+DA  +L+  +  G  
Sbjct: 601 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIV 660

Query: 390 PNASTFNMIFR 400
           PN  T+ M+ +
Sbjct: 661 PNERTWGMMVQ 671



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 132/278 (47%), Gaps = 9/278 (3%)

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           +V + L R  C A    +A  ++R M    + P  +T+ +   ALCR G+   A  +   
Sbjct: 147 VVLSTLARADCHA----DALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRG 202

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   GC P+++ +  ++   V      +   + ++M  +GC AD  T+N L+   C  G+
Sbjct: 203 MARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGR 262

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           + +A ++++ M+ +GC P+  T+  + + + +    + A  M G++     E N V  N 
Sbjct: 263 VREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP----EVNVVMLNT 318

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           +++   T        +L + M      P+V+TY IL+   C +G + +A + + EM EEK
Sbjct: 319 VIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM-EEK 377

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              P    Y  +L    R G       ++++M+ +GF+
Sbjct: 378 GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFS 415



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 131/275 (47%), Gaps = 1/275 (0%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           +D A   +D M ++   +    ++ ++    + G   +A      M+  GC PD   ++ 
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I  LC      EA+  F +L ++    + I Y  L+    R G   E  R+  EM + G
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
            Q +V +Y+ +I ALC+ G + R+  +  EM+  G +PN+ ++N L+    KA +    L
Sbjct: 519 CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDAL 578

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           ++  +M   G   D +TYN LI+  CK G    A+ +L  +  +  +P+  T+N++    
Sbjct: 579 ELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWH 638

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            K+  ++ A  +  K       PN  T+ +++Q F
Sbjct: 639 CKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 68/150 (45%), Gaps = 1/150 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    K    D +   ++ M ++ ++    ++++L+    +AG   +A+     M 
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + ++ +I+ LC+      A +  + L  +   PD++ Y  L+   C+   + 
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 645

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           +A  +  +    GI PN  T+ +++    R
Sbjct: 646 DAAMLLDKAISGGIVPNERTWGMMVQNFVR 675


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 190/371 (51%), Gaps = 5/371 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRMEEYGCAPDKIAF 221
           + DL +  +  +  +   +    F+ L++        ++A+     RM + GC P+  ++
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLVRGWCRAGNISEAERVFREM 278
           +I++  LC + R+ EA      + D      PDV+ YT ++ G+ + G++ +A   + EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              GI PNV TY+ +I ALC+   + +A +V   M++ G  PN  T+N+++  +  + + 
Sbjct: 226 LDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           ++ +    +M   G E D +TYN L+D  CK+G+  +A K+ +SM ++G  P  +T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
            +  +  G +   H +   M      PN   ++IL+  +A     D  + +  +M +  +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+  TY  +I + C  G   +A +Y  +MI+E+ L PG+ VY  ++  L    +  K +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER-LSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 519 ELVEKMVDRGF 529
           EL+ +M+DRG 
Sbjct: 465 ELILEMLDRGI 475



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 179/379 (47%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    K +  D A   +  M    V     T++ +V  Y  +G   EA+    +M 
Sbjct: 237 YNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + ++ ++  LC+  R +EA+  FDS+ K   +P++  Y  L++G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E   +   M   GI PN Y +SI+I A  + G++ +A  VF++M + G  P+++T+  ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            +  K+ R E  ++ + QM         I YN LI   C   K + A +++  M+ +G  
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   FN I     K G V  + +++  M  +  +PN +TY+ L+  +  +   D   KL
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKL 536

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    ++P+  TY  LI  YC +    +A    REM E   + P    Y ++LQ L 
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLF 595

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  +    +EL   + + G
Sbjct: 596 QTRRTAAAKELYVGITESG 614



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 188/388 (48%), Gaps = 10/388 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R ++  + T+  L++ Y   G   E    
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P+   FSI+I    ++ +  +A   F  ++ +   PD + Y  ++   C+
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + +A R F +M    + P    Y+ +I +LC   +  +A ++  EML+ G   ++I 
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+++  H K  R  +  ++++ M R+G + + ITY+ LID +C  GK+++A K+L SMV
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+N +     K+  +  A  ++ +M+     P+ +TYNI++Q    ++ T 
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVY 501
              +L   + E+  +  ++TY I++   C     NN       M +  C   L+  +  +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLC----KNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++  L + G+  + ++L   +   G 
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGL 685



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 163/378 (43%), Gaps = 36/378 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      FSIL+  Y + G   +A+  F++M + G  PD + +  VI ILC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 230 RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRG------W-------------------- 262
           +  R  +A  +F+ + D +  P  IVY +L+        W                    
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 263 ---------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                    C+ G + E+E++F  M   G++PN+ TYS +ID  C  G++  A  + A M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + VG +P+ +T+N L+  + K SR E  L ++ +M+  G   D ITYN ++    +  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A ++   +   G     ST+N+I   + K    + A RM+  +     +  T T+NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +         D    L   +  N + P+V TY ++       G           M E  C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 494 LKPGSSVYEMVLQQLRRA 511
                 +  +V + L+R 
Sbjct: 721 TANSRMLNSIVRKLLQRG 738



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 147/316 (46%), Gaps = 2/316 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M + G   D I F+ +I   C++ R  E++  FD + +   +P++I Y+ L+ G+C AG 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGK 529

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++   M   G++P+  TY+ +I+  C+  ++  A  +F EM   G  P+ IT+N 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++   +  RT    ++Y  +   G + +  TYN ++   CK+   ++A+++  ++    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                 TFN++   + K+G  + A  ++  +      P+  TY+++ +        + + 
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L   MEEN    N      ++      G    A  Y+  MI+EK     +S   + L  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF-MIDEKHFSLEASTASLFLDL 768

Query: 508 LRRAGQLQKHEELVEK 523
           L      + H  L EK
Sbjct: 769 LSGGKYQEYHRFLPEK 784



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 139/302 (46%), Gaps = 7/302 (2%)

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG---IQPNVYTY 290
           A +A+  FD L  +     I   N         + + A   +  M  AG   + PN+ TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I+I + C  G++         +++ G   ++I F  L++      RT   +  V  +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRCISKLGD 407
           +LGC  +  +YN L+   C + + ++A+++L  M   G  C P+  ++  +     K GD
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A+  Y +M D    PN VTYN ++     +++ D  +++   M +N V PN  TY  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++  YC  G    A  ++++M  +  ++P    Y  ++  L + G+  +  ++ + M  R
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 528 GF 529
           G 
Sbjct: 334 GL 335


>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 225/476 (47%), Gaps = 17/476 (3%)

Query: 63  FHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGV 122
           F S+++     NPN   +   ++    + P  +L  S  ST   +S   +  V+ K    
Sbjct: 12  FTSILRRLSTFNPNDDVHKVYTILTTTSSPE-TLKQSLKSTQIFLSNELIDQVL-KRVRF 69

Query: 123 RHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI--DLMKSRNVE 180
            H  P  Q L FF +   R  F H+      M+ + G+ R FD  W  +     K +NV 
Sbjct: 70  GHANPN-QTLEFFRYTGRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNV- 127

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA--FSIVISILCRKRRASEAQ 238
           IT  T  +++ R  +     + V  F + ++    PD     F+ ++  LC+++  ++A+
Sbjct: 128 ITPRTVMVVLGRVAKVCSVRQTVETFRKFKK--IVPDYGVNCFNALLRTLCQEKSMTDAR 185

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           + + SLK  F P++  +  L+ GW    N+ +AE    EMK  G++P+V TY+ ++D  C
Sbjct: 186 NVYHSLKHNFRPNLQTFNILLSGW---KNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYC 242

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           +  +I +A+ VF EM E    P+ IT+ +++       + +K   V  +MK  G   D  
Sbjct: 243 KGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVP 302

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
            YN  I  +C   +L  A ++++ MV KG +PNA+T+N+ FR      D+  +  +Y +M
Sbjct: 303 AYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRM 362

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
               C P T +   L+++F   +  +M L+L  EM E           +L  M C MG  
Sbjct: 363 MGEGCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKL 422

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
             A K   EMI EK  +P +  ++ +   +  A + +  + L +KM   G   RPL
Sbjct: 423 MEAEKCFLEMI-EKGQRPSNVSFKRIKVLMELANKHEAIQNLTQKMAIFG---RPL 474


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 195/386 (50%), Gaps = 4/386 (1%)

Query: 151 YHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ +I  L G+ R  D A   +D M  R     V T++IL+    +     +AV   + M
Sbjct: 155 YNTLIRGLCGRGRT-DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
            + GCAPD + +++V++ +C++ R  +A  F  SL     EP+ + Y  +++G C A   
Sbjct: 214 RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERW 273

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +AE++  EM   G  PNV T++++I  LCR G +  A ++  ++ + GC PNS+++N +
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K  + ++ +     M   GC  D ++YN L+   C+ G+++ A+++L+ +  KGC
Sbjct: 334 LHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   ++N +   ++K G    A  +  +M     +P+ +TY+ +          +  +K
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIK 453

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
              ++++  + PN   Y  ++   C     ++A      M+   C+ P  S Y ++++ L
Sbjct: 454 AFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM-PNESTYTILIEGL 512

Query: 509 RRAGQLQKHEELVEKMVDRGFTARPL 534
              G +++  E++ ++  RG  ++ L
Sbjct: 513 AYEGLVKEAREMMAELCSRGVVSKTL 538



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 185/384 (48%), Gaps = 7/384 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ M+       Q D A   +  M    +E    T++ L+R     G    A+  
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   GC PD + ++I++   C++    +A    D ++DK   PD++ Y  +V G C+
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +A    + +   G +PN  +Y+IV+  LC   +   A  + AEM   G  PN +T
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+    +    E  +++ +Q+ + GC  ++++YN ++   CK  K++ A+  +  MV
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+  ++N +   + + G+V+ A  +  ++KD  C P  ++YN ++     +  T+
Sbjct: 355 SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTE 414

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L+L  EM    ++P++ TY  + +  C  G    A K   + +++  ++P + +Y  +
Sbjct: 415 EALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK-VQDMGIRPNTVLYNAI 473

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           L  L +        +L   MV  G
Sbjct: 474 LLGLCKRRATHSAIDLFTYMVSNG 497



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 8/343 (2%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+++   +G  AEA           C PD ++++ +++  C   +   A+    ++  
Sbjct: 94  AALIKKLCASGRTAEARRVLA-----SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP- 147

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             EPD   Y  L+RG C  G    A  V  +M   G  P+V TY+I+++A C+     +A
Sbjct: 148 -MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 206

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +  EM + GC P+ +T+N ++    +  R +  ++    +   GCE +T++YN ++  
Sbjct: 207 VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C   + EDA K++  M RKG  PN  TFNM+   + + G V  A  +  ++    C PN
Sbjct: 267 LCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPN 326

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           +++YN ++  F   K  D  +   + M  +   P++ +Y  L+T  C  G  + A + + 
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLH 386

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++ ++ C  P    Y  V+  L +AG+ ++  EL+ +MV +G 
Sbjct: 387 QLKDKGC-TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGL 428



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 38/228 (16%)

Query: 142 PEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           P++  +P+   Y+ +++   K ++ D A  F++LM S      + +++ L+    R G  
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
             AV   +++++ GC P  I+++ VI  L +  +  EA    + +  K  +PD+I Y+ +
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVY------------------------------ 288
             G CR G I EA + F +++  GI+PN                                
Sbjct: 439 SSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGC 498

Query: 289 -----TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
                TY+I+I+ L   G +  A ++ AE+   G    ++     +R+
Sbjct: 499 MPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRL 546


>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
 gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
          Length = 563

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 177/358 (49%), Gaps = 1/358 (0%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           ++ FFNW   +P      D Y+ +I   G+ +  D    F+  ++   V +  +TFSI++
Sbjct: 150 MIMFFNWAIKQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVI 209

Query: 191 RRYVRAGLAAEAVHAFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
              VRA    +A+  F  +EE +G   D  + ++++  LCR+     A S+F+S+K K  
Sbjct: 210 DSLVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGKIP 269

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
            + + Y  ++ GW + G +SE +RVF EM+  G  P+  ++S +++ L R G+I  A  +
Sbjct: 270 FNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMI 329

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M E GC P++  +N ++   +     ++ ++ Y  +    C+ +  TY  +I    K
Sbjct: 330 FGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIK 389

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             K+ DA+++ + M+ +G      T       +   G  + A  +Y K + + C+ +   
Sbjct: 390 ASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGPPHAAMVIYTKARKVGCKISLSA 449

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           Y +L+   +      M+LK+  EM+E+    ++  Y  LI+  C +G + NA   + E
Sbjct: 450 YKLLLMRLSRFGKCGMMLKIWDEMQESGYSSDMEVYEYLISGLCNIGQFENAVLVMEE 507



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 5/257 (1%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           +K   I  +V +Y++VI AL R   I        E+   G   NS TF+ ++   V+A R
Sbjct: 158 IKQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVIDSLVRARR 217

Query: 338 TEKVLQVYNQMKR-LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP-NASTF 395
             K +Q++  ++   G E D  + N L+ C C+   +  A    NS+  KG  P N  T+
Sbjct: 218 VYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSV--KGKIPFNCMTY 275

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N+I    SK G V+   R++ +M++    P+ ++++ L++    +   +  + +   MEE
Sbjct: 276 NVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEE 335

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
               P+ N Y  +I+ +  +G+++   KY R ++ + C  P    Y  ++  L +A ++ 
Sbjct: 336 KGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNC-DPNIDTYTRMISGLIKASKVA 394

Query: 516 KHEELVEKMVDRGFTAR 532
              E+ ++M+DRG   +
Sbjct: 395 DALEMFDEMLDRGMVTK 411



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 1/244 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +FS L+    RAG   +AV  F  MEE GC PD   ++ +IS         E   ++  L
Sbjct: 309 SFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCL 368

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K  +P++  YT ++ G  +A  +++A  +F EM   G+     T +  I+ LC  G  
Sbjct: 369 LSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGPP 428

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  ++ +  +VGC+ +   +  L+    +  +   +L+++++M+  G  +D   Y +L
Sbjct: 429 HAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMMLKIWDEMQESGYSSDMEVYEYL 488

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C  G+ E+A+ V+   +RKG  P+    + +   +     V  A+R++ K+K  + 
Sbjct: 489 ISGLCNIGQFENAVLVMEESMRKGFCPSRFICSKLNNKLLASNKVERAYRLFLKIKHARH 548

Query: 424 EPNT 427
             N 
Sbjct: 549 SENA 552


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 173/336 (51%), Gaps = 2/336 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           F++L+R  VR G  A A + F+ M+  G     ++F+ +IS +CR      A++    + 
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           +    PDV  Y  L++G CR G I +A  VF +M   G++PN   ++I+IDA C+ G   
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 238

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
              ++  EM E G  P+++T+N ++    +A   +    +  +M+  G   DT+TY  LI
Sbjct: 239 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 298

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D +CK+ +L+ A+++  +MV +G   +  T+  +   +SK G    A R+ G+M +   E
Sbjct: 299 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 358

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+  TY +++  F         L+L KEM+    +P V TY +++  +C +G   NA   
Sbjct: 359 PDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADML 418

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +  MI    + P    Y ++L    + G++   EEL
Sbjct: 419 LNAMINIG-VSPDDITYNILLDGHCKHGKVTDIEEL 453



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 15/348 (4%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGL--AAEAVHAFNRMEEYGCAPDKIAFSIV 224
           A +  D M+SR V  TV +F+ ++    RAG    AE +H   RM E G  PD   +  +
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLH--RRMSEAGVTPDVYTYGAL 192

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I  LCR  R  +A+  F+ +  +  +P+ +V+T L+   C+ G+      + REM+  G+
Sbjct: 193 IQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGV 252

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+  TY+ +++ LCR   +  A  +  EM   G  P+++T+  L+  + K    +  ++
Sbjct: 253 RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAME 312

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           +   M   G   D +TY  LI    K G+  DA +VL  M+  G  P+ +T+ M+     
Sbjct: 313 IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFC 372

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF---ATSKSTDMVLKLKKEMEENEVEP 460
           + GDV    R+  +M++   +P  VTYN++M  F      K+ DM+L     M    V P
Sbjct: 373 RKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL---NAMINIGVSP 429

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +  TY IL+  +C  G   +    I E+   K   P   VY  ++ ++
Sbjct: 430 DDITYNILLDGHCKHGKVTD----IEELKSAKGTVPDLGVYTSIVGEI 473



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 168/333 (50%), Gaps = 2/333 (0%)

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTN 257
           A EA   + ++ + G  P+   F++++  L R    + AQ+ FD ++ +     V+ +  
Sbjct: 97  APEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 156

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++ G CRAG++  AE + R M  AG+ P+VYTY  +I  LCR G+I  A  VF +M   G
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 216

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
            +PN++ F  L+  H K    E +L+++ +M+  G   D +TYN +++  C+   L+ A 
Sbjct: 217 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 276

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            ++  M   G  P+  T+  +     K  +++ A  +   M       + VTY  L+   
Sbjct: 277 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
           + +  +    ++  EM E  +EP+  TY ++I  +C  G      + ++EM + K  KPG
Sbjct: 337 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM-QNKGRKPG 395

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              Y +++    + GQ++  + L+  M++ G +
Sbjct: 396 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVS 428



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 152/304 (50%), Gaps = 2/304 (0%)

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            ++ R   A EA +F+  L D    P+  ++  L+R   R G ++ A+ VF EM+  G++
Sbjct: 89  GLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVR 148

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
             V +++ +I  +CR G +  A  +   M E G  P+  T+  L++   +  R E    V
Sbjct: 149 RTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGV 208

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + +M   G + + + +  LID HCK G  E  +++   M  +G  P+A T+N I   + +
Sbjct: 209 FEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR 268

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
             D+  A  +  +M+     P+TVTY  L+  +   +  DM +++K+ M    V  +  T
Sbjct: 269 ARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVT 328

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI+     G   +A + + EM+E   L+P ++ Y MV+    R G ++    L+++M
Sbjct: 329 YTALISGLSKAGRSADAERVLGEMMEAG-LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM 387

Query: 525 VDRG 528
            ++G
Sbjct: 388 QNKG 391



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 41/296 (13%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+Y    +I    +V + + A    + M  R ++     F+IL+  + + G A   + 
Sbjct: 183 TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLE 242

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M E G  PD + ++ +++ LCR R    A      ++     PD + YT L+ G+C
Sbjct: 243 LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYC 302

Query: 264 -----------------------------------RAGNISEAERVFREMKMAGIQPNVY 288
                                              +AG  ++AERV  EM  AG++P+  
Sbjct: 303 KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT 362

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY++VIDA CR G +     +  EM   G +P  +T+N +M    K  + +    + N M
Sbjct: 363 TYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAM 422

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +G   D ITYN L+D HCK GK+ D I+ L S   KG  P+   +  I   I K
Sbjct: 423 INIGVSPDDITYNILLDGHCKHGKVTD-IEELKSA--KGTVPDLGVYTSIVGEIVK 475


>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g62470, mitochondrial-like [Glycine max]
          Length = 510

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 201/423 (47%), Gaps = 14/423 (3%)

Query: 114 HVIEKSCGVRHG----IPLLQ--------VLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
            V+   CGVR      + +LQ           FF     RP F H    Y+ M+ + G+ 
Sbjct: 54  EVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGRT 113

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           RQF+     ++ M  + + +T++TFSI ++ +  A    + V  F+ M++YG        
Sbjct: 114 RQFETMVAKLEEMGEKGL-LTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVI 172

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           + ++  L   +   EAQ+ F+ LKD+F P +  YT L+ GWCR  N+ EA RV+ EM   
Sbjct: 173 NFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDR 232

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G  P++  ++++++ L +C + + A  +F  M   G  PN  ++  +++   K     + 
Sbjct: 233 GFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEA 292

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           ++ ++ M   GC+ D   Y  LI    +  K++    +L  M  +GC P+  T+N + + 
Sbjct: 293 IEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKL 352

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           ++     + A R+Y KM     +P   TYN++M+ +  +K+ +M  ++  EM      P+
Sbjct: 353 MTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCPD 412

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
            N+Y + I           A KY+ EM+ EK +K     Y      + + G     EEL 
Sbjct: 413 DNSYIVYIGGLIRQDRSGEACKYLEEML-EKGMKALKLDYNKFASDISKTGNAVILEELA 471

Query: 522 EKM 524
            KM
Sbjct: 472 RKM 474


>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 507

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 212/442 (47%), Gaps = 10/442 (2%)

Query: 49  TPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSIS 108
           + F  P ++L   K HSLI+         +      L      P+  +  +      +++
Sbjct: 20  SKFYFPTKSLEFAKSHSLIEFQQEPPGELALKVQNVLKNYRDSPTRKIELALTQCNPTVT 79

Query: 109 PSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAW 168
              +  V++     RH       L FFNWV+   + +     Y+E++++ GK+R+FD   
Sbjct: 80  EDLILKVLK-----RHRSDWKPALIFFNWVSKGGKVLMGSGAYNEILDILGKMRRFDELS 134

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
             +D+M  R   +  +T+ +LV RY  A    EA+  FN   + G   D ++F  ++  L
Sbjct: 135 QVLDIMSKREGLVNEETYRVLVNRYAAAHKVEEAIEIFNTRRDIGLEIDLVSFQNLLMFL 194

Query: 229 CRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           CR +    A+S   S    F  D+     ++ GWC  GN+ EA+R ++++  +  +P+++
Sbjct: 195 CRYKHVQIAESLLYSKGKDFGMDIKTMNIVLNGWCVLGNVHEAKRFWKDIIGSKCKPDLF 254

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY   I AL + G++  A  ++  M E  C+P+ +  N ++      +R  + L+V+ +M
Sbjct: 255 TYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPEALEVFREM 314

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--GCNPNASTFNMIFRCISKLG 406
            + GC  +  TYN LI    +  ++E   ++L+ M+ K   C P+  TFN + + + K  
Sbjct: 315 SQQGCLPNGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCMPDHITFNYLLKALKKPE 374

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           ++     +  +M+   C  +T TYN++++++A     + V     EME+  + P+  +Y 
Sbjct: 375 EL---PLVLERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEKLGLGPDRRSYT 431

Query: 467 ILITMYCGMGHWNNAYKYIREM 488
           I+I      G  N+A  Y  EM
Sbjct: 432 IMIHWLYEKGRINDALHYFGEM 453



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 35/248 (14%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           K ++  + + T +I++  +   G   EA   +  +    C PD   +   I  L +K + 
Sbjct: 210 KGKDFGMDIKTMNIVLNGWCVLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKL 269

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             A   + ++ +K  +PDV++   ++   C    + EA  VFREM   G  PN  TY+ +
Sbjct: 270 GTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPEALEVFREMSQQGCLPNGATYNSL 329

Query: 294 IDALCRCGQITRAHDVFAEMLEV--GCEPNSITFNNLM---------------------- 329
           I    R  ++ + +++  EML+    C P+ ITFN L+                      
Sbjct: 330 IKHFSRIRRMEKVYELLDEMLDKKGSCMPDHITFNYLLKALKKPEELPLVLERMERNGCM 389

Query: 330 ----------RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                     R++      E+V   +N+M++LG   D  +Y  +I    + G++ DA+  
Sbjct: 390 ISTDTYNLILRLYADWDCEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYEKGRINDALHY 449

Query: 380 LNSMVRKG 387
              M  KG
Sbjct: 450 FGEMTSKG 457



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 113/245 (46%), Gaps = 2/245 (0%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ ++D L +  +      V   M +     N  T+  L+  +  A + E+ ++++N  
Sbjct: 116 AYNEILDILGKMRRFDELSQVLDIMSKREGLVNEETYRVLVNRYAAAHKVEEAIEIFNTR 175

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           + +G E D +++  L+   C+   ++ A  +L S   K    +  T N++      LG+V
Sbjct: 176 RDIGLEIDLVSFQNLLMFLCRYKHVQIAESLLYSK-GKDFGMDIKTMNIVLNGWCVLGNV 234

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A R +  +   KC+P+  TY   ++           LK+ + M E + +P+V     +
Sbjct: 235 HEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCI 294

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I   C       A +  REM ++ CL P  + Y  +++   R  +++K  EL+++M+D+ 
Sbjct: 295 IDALCFKNRVPEALEVFREMSQQGCL-PNGATYNSLIKHFSRIRRMEKVYELLDEMLDKK 353

Query: 529 FTARP 533
            +  P
Sbjct: 354 GSCMP 358



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 111/236 (47%), Gaps = 14/236 (5%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV-----HVKASRTEK 340
           N  TY ++++      ++  A ++F    ++G E + ++F NL+       HV+ + +  
Sbjct: 148 NEETYRVLVNRYAAAHKVEEAIEIFNTRRDIGLEIDLVSFQNLLMFLCRYKHVQIAES-- 205

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
              +Y++ K  G   D  T N +++  C  G + +A +    ++   C P+  T+    +
Sbjct: 206 --LLYSKGKDFG--MDIKTMNIVLNGWCVLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIK 261

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            ++K G +  A ++Y  M + +C+P+ V  N ++            L++ +EM +    P
Sbjct: 262 ALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPEALEVFREMSQQGCLP 321

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEK--CLKPGSSVYEMVLQQLRRAGQL 514
           N  TY  LI  +  +      Y+ + EM+++K  C+ P    +  +L+ L++  +L
Sbjct: 322 NGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCM-PDHITFNYLLKALKKPEEL 376



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 40/77 (51%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           ++ M+     I+ DT+++++R Y            +N ME+ G  PD+ +++I+I  L  
Sbjct: 380 LERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYE 439

Query: 231 KRRASEAQSFFDSLKDK 247
           K R ++A  +F  +  K
Sbjct: 440 KGRINDALHYFGEMTSK 456


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 176/338 (52%), Gaps = 7/338 (2%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD----KFEP 250
           R G A + +    RM E GC PD ++++I++  LC ++RA EA      + D    +  P
Sbjct: 140 RVGEAMDVL--LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPP 197

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V+ Y+ ++ G+   G + +   +F EM   GI P+V TY+ VID LC+     RA  VF
Sbjct: 198 NVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVF 257

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M++ G +PN+ T+N L+  ++   + ++V+Q+  +M   G + D  TY  L++  CK+
Sbjct: 258 QQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKN 317

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+  +A    +SM+RKG  P  ST+ ++    +  G ++  H     M +    P+   +
Sbjct: 318 GRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF 377

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           NI    +A     D  + +  +M ++ + PNV  Y  LI   C +G  ++A     +MI 
Sbjct: 378 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 437

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           E  + P   V+  ++  L    + ++ EELV +M+D+G
Sbjct: 438 EG-VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 172/381 (45%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K  +   A  F D M  + ++  V T+ IL+  Y   G  +E     + M 
Sbjct: 307 YGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMV 366

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           E G +PD   F+I  S   +     +A   F+ ++     P+V+ Y  L+   C+ G + 
Sbjct: 367 ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVD 426

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +AE  F +M   G+ PN+  ++ ++  LC   +  RA ++  EML+ G  PN++ FN L+
Sbjct: 427 DAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 486

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  R  +  ++ + M+ +G   D  +Y  LI  +C  G+ ++A KV + MV  G +
Sbjct: 487 CNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLS 546

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+N +         ++ A+ ++ +M      P  VTYN ++     +K      +L
Sbjct: 547 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 606

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M  +  + ++ TY I++   C     + A+K  + +   K L+     + +++  L 
Sbjct: 607 YLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLC-SKGLQLNIITFTIMIGALL 665

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           + G+ +   +L   +   G  
Sbjct: 666 KGGRKEDAMDLFAAIPANGLV 686



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 184/463 (39%), Gaps = 77/463 (16%)

Query: 142 PEFVHSPDLYHEMINLAGKV--RQFDLAWHFIDLMK---SRNVEITVDTFSILVRRYVRA 196
           PE    PD     I L G    ++ + A   + +M     R     V ++SI++  +   
Sbjct: 153 PELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTE 212

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
           G   +  + F  M + G  PD + ++ VI  LC+ +    A+  F  + D  F+P+   Y
Sbjct: 213 GQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTY 272

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC---RC------------ 300
             L+ G+   G   E  ++  EM   G++P+ YTY  +++ LC   RC            
Sbjct: 273 NCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332

Query: 301 --------------------GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
                               G ++  H     M+E G  P+   FN     + K    +K
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA---------------IKVLNSMVR 385
            + ++N+M++ G   + + Y  LID  CK G+++DA               I V NS+V 
Sbjct: 393 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452

Query: 386 KGCN--------------------PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C                     PNA  FN +   +  +G V    R+   M+ +   P
Sbjct: 453 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 512

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  +Y  L+  +  +  TD   K+   M    + P   TY  L+  YC     ++AY   
Sbjct: 513 DAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLF 572

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           REM+  K + PG   Y  +L  L +  +  + +EL   M++ G
Sbjct: 573 REML-RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 151/347 (43%), Gaps = 3/347 (0%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y  +I+   K+ + D A    + M +  V   +  F+ LV           A  
Sbjct: 406 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEE 465

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
               M + G  P+ + F+ +I  LC   R  E +   D ++     PD   YT L+ G+C
Sbjct: 466 LVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYC 525

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G   EAE+VF  M   G+ P   TY+ ++   C   +I  A+ +F EML  G  P  +
Sbjct: 526 LTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVV 585

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N ++    +  R  +  ++Y  M   G + D  TYN +++  CK   +++A K+  S+
Sbjct: 586 TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 645

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG   N  TF ++   + K G    A  ++  +      PN VTY ++ +      S 
Sbjct: 646 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSL 705

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           +    L   ME+N   PN      L+      G  + A  Y+ ++ E
Sbjct: 706 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 752



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 17/331 (5%)

Query: 213 GCAPDK-IAFSIVISILCRKRRAS--EAQSFFDSLKDKFEPDVI-----VYTNLVRGWCR 264
           G AP + +    +I+   R R     +A   FD L     P  +     + T + R  C 
Sbjct: 6   GAAPARCLELERIIAERARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCS 65

Query: 265 AGN---ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           + +   +S   R+ RE     + PN+ TYSI+I   CR G +      F  +L+ G   +
Sbjct: 66  SASELAVSHFNRMVRECS-DKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMD 124

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQ-MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
            I  N L++      R  + + V  Q M  LGC  DT++Y  L+   C + + E+A+++L
Sbjct: 125 HIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELL 184

Query: 381 NSMV---RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           + M     + C PN  +++++       G V+  + ++ +M D    P+ VTY  ++   
Sbjct: 185 HMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGL 244

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             ++  D    + ++M +N  +PN  TY  LI  Y  +G W    + + EM   + LKP 
Sbjct: 245 CKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM-SARGLKPD 303

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              Y  +L  L + G+ ++     + M+ +G
Sbjct: 304 CYTYGSLLNYLCKNGRCREARFFFDSMIRKG 334


>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g15010, mitochondrial; Flags: Precursor
 gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 572

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 189/376 (50%), Gaps = 7/376 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILV 190
            +FF W   +  +V S   YH MI++ GK+R+FD AW  ID M+  +   +   T  I++
Sbjct: 145 FTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMI 204

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           R+Y       +A++ F+  + +        F  ++S LCR +  S+A       KDK+  
Sbjct: 205 RKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF 264

Query: 251 DVIVYTNLVRGWCRA-GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           D   +  ++ GWC   G+  EAERV+ EM   G++ +V +YS +I    + G + +   +
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR-LGCEADTITYNFLIDCHC 368
           F  M +   EP+   +N ++    KAS   +   +   M+   G E + +TYN LI   C
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  K E+A +V + M+ KG  P   T++   R +    +V     +  KM+ + CEP   
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVE 441

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY +L++     +  D VL L  EM+E  V P++++Y ++I      G    AY Y +EM
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501

Query: 489 IEEKCLKPGSSVYEMV 504
            ++K ++P  +V +M+
Sbjct: 502 -KDKGMRPNENVEDMI 516



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 6/257 (2%)

Query: 185 TFSILVRRYVRA-GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           +F+I++  +    G   EA   +  M   G   D +++S +IS   +    ++    FD 
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327

Query: 244 LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCG 301
           +K +  EPD  VY  +V    +A  +SEA  + + M+   GI+PNV TY+ +I  LC+  
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   A  VF EMLE G  P   T++  MR+       E+V ++  +M+++GCE    TY 
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFELLAKMRKMGCEPTVETYI 444

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C+    ++ + + + M  K   P+ S++ ++   +   G +  A+  Y +MKD 
Sbjct: 445 MLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504

Query: 422 KCEPNTVTYNILMQMFA 438
              PN    +++   F+
Sbjct: 505 GMRPNENVEDMIQSWFS 521



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/254 (20%), Positives = 116/254 (45%), Gaps = 5/254 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE-PNSITFNNLMRVHVKASR 337
           K  G   +V  Y  +I  L +  +   A  +  EM +      NS T   ++R +     
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 212

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP-NASTFN 396
             K +  ++  KR   E     +  L+   C+   + DA  ++     K   P +A +FN
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 270

Query: 397 MIFR-CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           ++     + +G    A R++ +M ++  + + V+Y+ ++  ++   S + VLKL   M++
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             +EP+   Y  ++         + A   ++ M EEK ++P    Y  +++ L +A + +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390

Query: 516 KHEELVEKMVDRGF 529
           + +++ ++M+++G 
Sbjct: 391 EAKQVFDEMLEKGL 404


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 197/381 (51%), Gaps = 5/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I+    +++ D A  ++  M  + V  +V+T++ L+  Y +            +ME
Sbjct: 424 FNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME 483

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  P+ +++  +I+ LC+  +  EA+    D +     P+  VY  L+ G C  G + 
Sbjct: 484 EIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVK 543

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R F EM  + I P + TY+++ID LC+ G++T A D   ++   G  P+ IT+N+L+
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             +  A    K L +Y  MK LG +    TY+ LI    K+G +E   K+ N M++    
Sbjct: 604 SGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLL 662

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN-ILMQMFATSKSTDMVLK 448
           P+   +N +  C +++G+   A+ ++  M D    P+ +TYN +++  F   K ++ +  
Sbjct: 663 PDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSN-IKD 721

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L   M+  E+ P  +TY IL+  +C +  ++ AY + REM+E   L P +S+   +   L
Sbjct: 722 LVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFL-PNASICNELTAGL 780

Query: 509 RRAGQLQKHEELVEKMVDRGF 529
            + G+LQ+ + +  +M  +G 
Sbjct: 781 EQEGRLQEVQVICSEMNVKGI 801



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 177/377 (46%), Gaps = 2/377 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y + I  A K++   +   F+D M+ R V   V  +++L+    R     +A   F+ M
Sbjct: 178 MYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEM 237

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
                    + ++ +I   C+      A    + +K+K   P++I + +L+ G C+   +
Sbjct: 238 CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKM 297

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  + +EM++ G  P+ YTYSI+ D L RC     A +++ +  E G   N+ T + L
Sbjct: 298 KEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSIL 357

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K  + EK  ++  +    G  AD + YN  ++ +C+ G +  AI  +  M   G 
Sbjct: 358 LNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGL 417

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN+ TFN +      + +++ A     KM +    P+  TYN L+  +    + D   +
Sbjct: 418 RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQ 477

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + ++MEE  V+PNV +Y  LI   C  G    A   +R+MI    L P + VY M++   
Sbjct: 478 ILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVL-PNAQVYNMLIDGS 536

Query: 509 RRAGQLQKHEELVEKMV 525
              G+++      ++M+
Sbjct: 537 CMVGKVKDALRFFDEMM 553



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 185/417 (44%), Gaps = 42/417 (10%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            V S   Y+ +I+   KV + D A+   + MK ++V   + TF+ L+    +     EA 
Sbjct: 242 LVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEAR 301

Query: 204 HAFNRMEEYGCAPDKIAFSIV-----------------------------------ISIL 228
                ME  G  PD   +SI+                                   ++ L
Sbjct: 302 SLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGL 361

Query: 229 CRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C++ +  +A+       ++    D ++Y   V G+CR G++++A      M+  G++PN 
Sbjct: 362 CKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNS 421

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            T++ +ID  C   ++ +A +   +M E G  P+  T+N L+  + K    ++  Q+  Q
Sbjct: 422 ITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQ 481

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M+ +G + + ++Y  LI+C CKDGK+ +A  VL  M+ +G  PNA  +NM+      +G 
Sbjct: 482 MEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGK 541

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V  A R + +M   +  P  VTYN+L+                 ++  +   P+V TY  
Sbjct: 542 VKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNS 601

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           LI+ Y   G+ +     + E ++   +KP    Y  ++    + G      ELVEK+
Sbjct: 602 LISGYANAGNVSKCLG-LYETMKNLGIKPTVRTYHPLISGCSKEGI-----ELVEKL 652



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 1/291 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F +     F  D  +Y   ++   +  N+         M+  G++PNV+ Y+++I  LCR
Sbjct: 164 FMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCR 223

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             +I  A  +F EM  +    + +T+N L+  + K    +   ++  +MK      + IT
Sbjct: 224 EKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIIT 283

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N L+   CK  K+++A  +L  M   G  P+  T++++F  + +  D NGA  +Y +  
Sbjct: 284 FNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT 343

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +     N  T +IL+         +   ++ K+  EN +  +   Y   +  YC +G  N
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            A   I  M E   L+P S  +  ++ +     ++ K EE V+KM ++G T
Sbjct: 404 KAILTIERM-ESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVT 453


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 190/392 (48%), Gaps = 3/392 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W T R  F  S   ++ +I++  K   FD  W  ++ +K+ N++I   TFS+L+  Y
Sbjct: 83  FFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAY 141

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDV 252
            ++G+A +AV +F +M+++GC PD   ++ ++ ++ +K     A + ++  LK  + P+ 
Sbjct: 142 AKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNR 201

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +  L+ G C+ G   +A ++F EM   GI PN   Y+I++  LC+  +    H +   
Sbjct: 202 ATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNT 261

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   GC P+SIT N L+    K  + ++   +    ++ G       Y+ LID   +  +
Sbjct: 262 MKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            ++  +    M + G  P+   + ++ R   ++G V+ A  M   M      P+T  YN 
Sbjct: 322 YDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA 381

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L++ F      D    L+ E+ +N+  P   TY ILI   C  G  + A +   +M    
Sbjct: 382 LIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLG 441

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           C  P    +  ++  L +AG+L++   L  KM
Sbjct: 442 C-SPSIMTFNALIDGLCKAGELEEARHLFYKM 472



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 195/440 (44%), Gaps = 54/440 (12%)

Query: 143 EFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +F   PD+  Y+ ++++  +   F LA    + M   N      TF IL+    + G   
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLV 259
           +A+  F+ M + G  P+ + ++I++S LC+ +R  +     +++K     PD I    L+
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 260 RGWCRAGNISEAERVF-----------------------------------REMKMAGIQ 284
            G+C+ G I EA  +                                    R+M  AGI+
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+V  Y+I+I   C  G +  A ++  +M + G  P++  +N L++        +K   +
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             ++ +  C   + TY  LI   C++G L++A ++ N M   GC+P+  TFN +   + K
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 405 LGDVNGAHRMYGKMKDLKCEP--------------NTVTYNILMQMFATSKSTDMVLKLK 450
            G++  A  ++ KM+  K  P              +T +   +++    S       KL 
Sbjct: 459 AGELEEARHLFYKMEIGK-NPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLL 517

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            ++ ++ V P++ TY +LI  +C   + N A+K  RE+ + K   P S  Y  ++    R
Sbjct: 518 MQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFREL-QLKGHSPDSVTYGTLIDGFHR 576

Query: 511 AGQLQKHEELVEKMVDRGFT 530
             + +    ++++MV  G T
Sbjct: 577 VDREEDAFRVLDQMVKNGCT 596



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           ++  E+K + IQ    T+S++I A  + G   +A + F +M + GC+P+  T+N+++ V 
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM 176

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           V+       L VYNQM +L    +  T+  L++  CK+GK +DA+K+ + M +KG  PN 
Sbjct: 177 VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
             + +I   + +    +  HR+   MK   C P+++T N L+  F      D    L + 
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
            E+      +  Y  LI        ++   ++ R+M +   ++P   +Y ++++     G
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG-IEPDVVLYTILIRGFCEVG 355

Query: 513 QLQKHEELVEKMVDRGFT 530
            +     ++  M  RG +
Sbjct: 356 MVDYALNMLNDMTQRGLS 373



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 172/389 (44%), Gaps = 39/389 (10%)

Query: 170 FIDLMKSRNVEITVD-------TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
            +D  +S  +EI+ +       T++IL+    R GL  EA   FN+ME  GC+P  + F+
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEP--------------DVIVYTNLVRGWCRAGNI 268
            +I  LC+     EA+  F  ++    P              D      +V   C +G I
Sbjct: 451 ALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLI 510

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A ++  ++  +G+ P++ TY+++I+  C+   I  A  +F E+   G  P+S+T+  L
Sbjct: 511 LKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTL 570

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +  R E   +V +QM + GC   +  Y  L+   C+ GKL  A  +    +R   
Sbjct: 571 IDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLP 630

Query: 389 NPNASTFNMIFRCISKLGDVNGAHR----MYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           +    T  +      K G++  A R    M  K+ + +  P    Y I +     ++ ++
Sbjct: 631 SQEDETLKLAEEHFEK-GELEKAVRCLLEMNFKLNNFEIAP----YTIWLIGLCQARRSE 685

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             LK+   ++E +++ N  +  +LI   C  G+   A       +E+     G  +   +
Sbjct: 686 EALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEK-----GFMLMPRI 740

Query: 505 LQQLRRAGQLQ---KHE-ELVEKMVDRGF 529
             QL R+  LQ   KH  +L+ +M   G+
Sbjct: 741 CNQLLRSLILQDKMKHALDLLNRMNSAGY 769



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/302 (20%), Positives = 123/302 (40%), Gaps = 44/302 (14%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL- 150
           PSL L  SQ      +  ++++ ++E+ C    G+    +L  +  +    +    PD+ 
Sbjct: 478 PSLFLRLSQ-GADRVMDTASLQTMVERLC--ESGL----ILKAYKLLMQLADSGVVPDIM 530

Query: 151 -YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            Y+ +IN   K +  + A+     ++ +       T+  L+  + R     +A    ++M
Sbjct: 531 TYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM 590

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFF------------DSLK---DKFEP---- 250
            + GC P    +  +++  CRK + S A S +            ++LK   + FE     
Sbjct: 591 VKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELE 650

Query: 251 ----------------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                           ++  YT  + G C+A    EA ++F  +K   +  N  +  ++I
Sbjct: 651 KAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLI 710

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           + LC+ G +  A D+F   LE G        N L+R  +   + +  L + N+M   G +
Sbjct: 711 NGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYD 770

Query: 355 AD 356
            D
Sbjct: 771 LD 772


>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 581

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 217/444 (48%), Gaps = 25/444 (5%)

Query: 101 ISTAHSIS--PSTVRHVIEKSCGVRHGIPL-LQVLS-----------FFNWVTARPEFVH 146
           +S  H +S  P  +++ IE  CGV+    L L+VLS           FF W   +  + H
Sbjct: 101 MSILHQLSGNPVEMKNKIE-HCGVKVSRELVLEVLSRIRNDWEAAFTFFLWAGRQLGYSH 159

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV---DTFSILVRRYVRAGLAAEAV 203
           S   YH MI++ GK+R+FD AW  ID M+     I++    T  I++R+Y        A+
Sbjct: 160 SVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGRAI 219

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
           + F   + +        F  ++S LCR +   +A+      KD F  +   +  ++ GWC
Sbjct: 220 NTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNGWC 279

Query: 264 RA-GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
              G+  EA+R++REM    I  +V +Y+ +I    + G + +   ++ +M EVG EP+ 
Sbjct: 280 NVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDR 339

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             +N+++    K     + + +   M+  G   +T+TYN LI   C+  K+++A  + + 
Sbjct: 340 KIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDE 399

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++ G +P   T++  FR +    +V     +   M+ L C P   TY +L++ F   + 
Sbjct: 400 MLQHGHSPTIRTYHAFFRSLRTGEEVFA---LLENMRKLGCHPTIDTYIMLIRKFCRWRQ 456

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D V KL  ++ EN + P+ ++Y +LI      G    AYK+  +M +EK L P   + E
Sbjct: 457 FDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADM-KEKQLLPDPKLDE 515

Query: 503 MVLQQL--RRAGQLQKHEELVEKM 524
           M+   L  ++  + Q  E  V+++
Sbjct: 516 MLQTWLSNKQVAECQMTESKVDQL 539


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 186/389 (47%), Gaps = 9/389 (2%)

Query: 146 HSPDLYHEMINLAGKV--RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P        LAG V  ++ DLA         R V   + TF+ ++    R G   +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE----PDVIVYTNLV 259
                ++ +G AP    ++ +I   C+K  A         LK+  E    P  + +  L+
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+C+  N + A RVF EMK  GI  +V TY+ +I  LC  G++     +  EM ++G  
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN ITF  +++   K           + M     E D + YN LID + + GK+EDA+ V
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
             +M +KG +PN +T+N +    S+ GD   A  +  +MK+   E + VTYN+L+     
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                  +KL  EM E  +EPN  TY  +I  +C  G+  +AY+    M  EKC K  + 
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--EKCRKRANV 509

Query: 500 V-YEMVLQQLRRAGQLQKHEELVEKMVDR 527
           V Y + ++   + G++ +  +L+ +M+D+
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDK 538



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 176/372 (47%), Gaps = 7/372 (1%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y     ++G  ++ Q   A      +K+  +  +V T++ L+  Y + G A    H
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 205 A---FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
                  M E G +P  + F ++I+  C+    + A   F+ +K +     V+ Y +L+ 
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C  G + E  ++  EM+  G+ PN  T+  V+   C+ G +  A+D    M E   EP
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           + + +N L+ V+ +  + E  + V   M + G   +  TYN LI    + G    A  +L
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M  KG   +  T+N++   +   G+V  A ++  +M ++  EPN +TYN ++Q F   
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK 487

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
            +     +++  ME+     NV TY + I  +C +G  + A   + EM++ KCL P    
Sbjct: 488 GNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD-KCLVPNGIT 546

Query: 501 YEMVLQQLRRAG 512
           YE + + +   G
Sbjct: 547 YETIKEGMMEKG 558



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 45/341 (13%)

Query: 233 RASEAQSFFDSL------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           RAS+    +D+         +  P       L+ G   A  +  AE+ FR      + P+
Sbjct: 131 RASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPD 190

Query: 287 VYTYSIVIDALCRCGQITRAHDV------------------------------------- 309
           +YT++ VI  LCR GQ+ +A DV                                     
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250

Query: 310 -FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
              EM+E G  P ++TF  L+  + K S T   ++V+ +MK+ G  A  +TYN LI   C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            +GK+E+ +K++  M   G +PN  TF  + +   K G +  A+     M +   EP+ V
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YNIL+ ++      +  + +K+ M +  + PNV TY  LIT +   G W +A   + EM
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +EK ++     Y +++  L   G+++K  +L+++M + G 
Sbjct: 431 -KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470


>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04130, mitochondrial; Flags: Precursor
 gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 508

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 194/403 (48%), Gaps = 36/403 (8%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L    W  +     HS D Y   +++ GK +++D    F++ M+   + +T++T + ++
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIM 162

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RR+  AG   EAV  F+R+ E+G   +  + ++++  LC+++R  +A+     LK    P
Sbjct: 163 RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP 222

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   +   + GWC+A  + EA    +EMK  G +P V +Y+ +I   C+  +  + +++ 
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           +EM   G  PNSIT+  +M         E+ L+V  +MKR GC+ D++ YN LI    + 
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+LE+A +V                   FR                +M +L    NT TY
Sbjct: 343 GRLEEAERV-------------------FRV---------------EMPELGVSINTSTY 368

Query: 431 NILMQMFATSKSTDMVLKLKKEME-ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           N ++ M+      D  ++L KEME  N   P+V+TY+ L+      G      K ++EM+
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
            +  L    S Y  ++Q+L RA   +    L E+M+ +  T R
Sbjct: 429 TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 194/386 (50%), Gaps = 4/386 (1%)

Query: 151 YHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ +I  L G+ R  + A   +D M  R     V T++IL+    +     +A+   + M
Sbjct: 159 YNTLIRGLCGRGRTGN-ALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 217

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
              GCAPD I +++V++ +C++ R  +A  F  SL     EP+ + Y  +++G C A   
Sbjct: 218 RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERW 277

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +AE++  EM   G  PNV T++++I  LCR G +  A +V  ++ + GC PNS+++N +
Sbjct: 278 EDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K  + ++ +     M   GC  D ++YN L+   C+ G+++ A+++L+ +  KGC
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   ++N +   ++K G    A  +  +M     +P+ +TY+ +          +  ++
Sbjct: 398 TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIR 457

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
              ++++  + PN   Y  ++   C     +NA      MI   C+ P  S Y ++++ L
Sbjct: 458 AFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCM-PNESTYTILIEGL 516

Query: 509 RRAGQLQKHEELVEKMVDRGFTARPL 534
              G +++  EL+ ++  RG  ++ L
Sbjct: 517 TYEGLVKEARELLGELCSRGVVSKGL 542



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 177/375 (47%), Gaps = 10/375 (2%)

Query: 157 LAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L G VR+ DL  A   ++ M            + L+++   +G  AEA           C
Sbjct: 66  LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLA-----AC 120

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
            PD +A++ +++  C   +   A+     +    EPD   Y  L+RG C  G    A  V
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMP--MEPDSYTYNTLIRGLCGRGRTGNALVV 178

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             +M   G  P+V TY+I+++A C+     +A  +  EM   GC P+ IT+N ++    +
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             R +  ++    +   GCE +T++YN ++   C   + EDA K++  M +KG  PN  T
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           FNM+   + + G V  A  +  ++    C PN+++YN ++  F   K  D  +   + M 
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
                P++ +Y  L+T  C  G  + A + + ++ ++ C  P    Y  V+  L +AG+ 
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC-TPVLISYNTVIDGLTKAGKT 417

Query: 515 QKHEELVEKMVDRGF 529
           ++  EL+ +MV +G 
Sbjct: 418 KEALELLNEMVTKGL 432



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 173/349 (49%), Gaps = 7/349 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  ++    K   +  A   +D M+++     + T++++V    + G   +A+  
Sbjct: 189 PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEF 248

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              +  +GC P+ ++++IV+  LC   R  +A+     +  K + P+V+ +  L+   CR
Sbjct: 249 LKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCR 308

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  V  ++   G  PN  +Y+ ++ A C+  ++ RA      M+  GC P+ ++
Sbjct: 309 RGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVS 368

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    +    +  +++ +Q+K  GC    I+YN +ID   K GK ++A+++LN MV
Sbjct: 369 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMV 428

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P+  T++ I   + +   +  A R + K++D+   PNTV YN ++      + T 
Sbjct: 429 TKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETH 488

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
             + L   M  N   PN +TY ILI    G+  +    K  RE++ E C
Sbjct: 489 NAIDLFIYMISNGCMPNESTYTILIE---GL-TYEGLVKEARELLGELC 533


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 201/400 (50%), Gaps = 2/400 (0%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L+F   ++ +  F      ++ ++N   K      A   +D+M     +  V T++ ++ 
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEP 250
              + G   EAV   ++M    C+P+ + ++ +IS LC++ +  EA      L  K   P
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           DV  + +L++G C   N   A  +F EM+  G +P+ +TY+++ID+LC  G++  A ++ 
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M   GC  + IT+N L+    KA++T +  +++++M+  G   +++TYN LID  CK 
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            ++EDA ++++ M+ +G  P+  T+N +     + GD+  A  +   M    CEP+ VTY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             L+     +   ++  KL + ++   +    + Y  +I           A    REM+E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 491 EKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRGF 529
           +    P +  Y +V + L    G +++  + + +++++GF
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 191/400 (47%), Gaps = 12/400 (3%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L  FN  + +P F   P LY E++   G+   FD     ++ MKS   E+   TF IL+ 
Sbjct: 67  LRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIE 126

Query: 192 RYVRAGLAAEAVHAFNRM-EEYGCAPDKIAFSIVISILC-----RKRRASEAQSFFDSLK 245
            Y +  L  E +   + M +E+G  PD   ++ ++++L      +    S A+     +K
Sbjct: 127 SYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK 186

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               PDV  +  L++  CRA  +  A  +  +M   G+ P+  T++ V+      G +  
Sbjct: 187 ----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK-RLGCEADTITYNFLI 364
           A  +  +M+E GC  ++++ N ++    K  R E  L    +M  + G   D  T+N L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           +  CK G ++ AI++++ M+++G +P+  T+N +   + KLG+V  A  +  +M    C 
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PNTVTYN L+         +   +L + +    + P+V T+  LI   C   +   A + 
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             EM  + C +P    Y M++  L   G+L +   ++++M
Sbjct: 423 FEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 4/264 (1%)

Query: 269 SEAERVFR-EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           S A R+F    K     P    Y  ++  L R G       +  +M    CE  + TF  
Sbjct: 64  SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123

Query: 328 LMRVHVKASRTEKVLQVYNQM-KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS-MVR 385
           L+  + +    +++L V + M    G + DT  YN +++    DG     +++ ++ M  
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV-DGNSLKLVEISHAKMSV 182

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G  P+ STFN++ + + +   +  A  M   M      P+  T+  +MQ +      D 
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            L+++++M E     +  +  +++  +C  G   +A  +I+EM  +    P    +  ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L +AG ++   E+++ M+  G+
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGY 326


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 190/392 (48%), Gaps = 3/392 (0%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W T R  F  S   ++ +I++  K   FD  W  ++ +K+ N++I   TFS+L+  Y
Sbjct: 83  FFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAY 141

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDV 252
            ++G+A +AV +F +M+++GC PD   ++ ++ ++ +K     A + ++  LK  + P+ 
Sbjct: 142 AKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNR 201

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +  L+ G C+ G   +A ++F EM   GI PN   Y+I++  LC+  +    H +   
Sbjct: 202 ATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNT 261

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   GC P+SIT N L+    K  + ++   +    ++ G       Y+ LID   +  +
Sbjct: 262 MKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            ++  +    M + G  P+   + ++ R   ++G V+ A  M   M      P+T  YN 
Sbjct: 322 YDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA 381

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L++ F      D    L+ E+ +N+  P   TY ILI   C  G  + A +   +M    
Sbjct: 382 LIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLG 441

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           C  P    +  ++  L +AG+L++   L  KM
Sbjct: 442 C-SPSIMTFNALIDGLCKAGELEEARHLFYKM 472



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 180/414 (43%), Gaps = 57/414 (13%)

Query: 143 EFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +F   PD+  Y+ ++++  +   F LA    + M   N      TF IL+    + G   
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLV 259
           +A+  F+ M + G  P+ + ++I++S LC+ +R  +     +++K     PD I    L+
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 260 RGWCRAGNISEAERVF-----------------------------------REMKMAGIQ 284
            G+C+ G I EA  +                                    R+M  AGI+
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+V  Y+I+I   C  G +  A ++  +M + G  P++  +N L++        +K   +
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             ++ +  C   + TY  LI   C++G L++A ++ N M   GC+P+  TFN +   + K
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ----------MFATSKSTDMVLKLKKEME 454
            G++  A  ++ KM+  K   N   +  L Q           F      +   ++  +M 
Sbjct: 459 AGELEEARHLFYKMEIGK---NPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMV 515

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAY----KYIREM--IEEKCLKPGSSVYE 502
           +N   P+   Y+ L+T  C  G  + A+    KY+R +   E++ LK     +E
Sbjct: 516 KNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFE 569



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           ++  E+K + IQ    T+S++I A  + G   +A + F +M + GC+P+  T+N+++ V 
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM 176

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           V+       L VYNQM +L    +  T+  L++  CK+GK +DA+K+ + M +KG  PN 
Sbjct: 177 VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
             + +I   + +    +  HR+   MK   C P+++T N L+  F      D    L + 
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
            E+      +  Y  LI        ++   ++ R+M +   ++P   +Y ++++     G
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG-IEPDVVLYTILIRGFCEVG 355

Query: 513 QLQKHEELVEKMVDRGFT 530
            +     ++  M  RG +
Sbjct: 356 MVDYALNMLNDMTQRGLS 373



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 35/191 (18%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF------------DSLK--- 245
           +A    ++M + GC P    +  +++  CRK + S A S +            ++LK   
Sbjct: 506 DAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAE 565

Query: 246 DKFEP--------------------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
           + FE                     ++  YT  + G C+A    EA ++F  +K   +  
Sbjct: 566 EHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDV 625

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  +  ++I+ LC+ G +  A D+F   LE G        N L+R  +   + +  L + 
Sbjct: 626 NPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLL 685

Query: 346 NQMKRLGCEAD 356
           N+M   G + D
Sbjct: 686 NRMNSAGYDLD 696


>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
          Length = 532

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 189/376 (50%), Gaps = 7/376 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILV 190
            +FF W   +  +V S   YH MI++ GK+R+FD AW  ID M+  +   +   T  I++
Sbjct: 105 FTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMI 164

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           R+Y       +A++ F+  + +        F  ++S LCR +  S+A       KDK+  
Sbjct: 165 RKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF 224

Query: 251 DVIVYTNLVRGWCRA-GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           D   +  ++ GWC   G+  EAERV+ EM   G++ +V +YS +I    + G + +   +
Sbjct: 225 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 284

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR-LGCEADTITYNFLIDCHC 368
           F  M +   EP+   +N ++    KAS   +   +   M+   G E + +TYN LI   C
Sbjct: 285 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 344

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  K E+A +V + M+ KG  P   T++   R +    +V     +  KM+ + CEP   
Sbjct: 345 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVE 401

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY +L++     +  D VL L  EM+E  V P++++Y ++I      G    AY Y +EM
Sbjct: 402 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 461

Query: 489 IEEKCLKPGSSVYEMV 504
            ++K ++P  +V +M+
Sbjct: 462 -KDKGMRPNENVEDMI 476



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 6/257 (2%)

Query: 185 TFSILVRRYVRA-GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           +F+I++  +    G   EA   +  M   G   D +++S +IS   +    ++    FD 
Sbjct: 228 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 287

Query: 244 LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCG 301
           +K +  EPD  VY  +V    +A  +SEA  + + M+   GI+PNV TY+ +I  LC+  
Sbjct: 288 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 347

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   A  VF EMLE G  P   T++  MR+       E+V ++  +M+++GCE    TY 
Sbjct: 348 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFELLAKMRKMGCEPTVETYI 404

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C+    ++ + + + M  K   P+ S++ ++   +   G +  A+  Y +MKD 
Sbjct: 405 MLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 464

Query: 422 KCEPNTVTYNILMQMFA 438
              PN    +++   F+
Sbjct: 465 GMRPNENVEDMIQSWFS 481



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/254 (20%), Positives = 116/254 (45%), Gaps = 5/254 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE-PNSITFNNLMRVHVKASR 337
           K  G   +V  Y  +I  L +  +   A  +  EM +      NS T   ++R +     
Sbjct: 113 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 172

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP-NASTFN 396
             K +  ++  KR   E     +  L+   C+   + DA  ++     K   P +A +FN
Sbjct: 173 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 230

Query: 397 MIFR-CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           ++     + +G    A R++ +M ++  + + V+Y+ ++  ++   S + VLKL   M++
Sbjct: 231 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 290

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             +EP+   Y  ++         + A   ++ M EEK ++P    Y  +++ L +A + +
Sbjct: 291 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 350

Query: 516 KHEELVEKMVDRGF 529
           + +++ ++M+++G 
Sbjct: 351 EAKQVFDEMLEKGL 364


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 190/371 (51%), Gaps = 5/371 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+R+   A H +  M+ +     V +++ ++  Y   G   + V     M+  G  P+ 
Sbjct: 124 GKIRE---AHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNL 180

Query: 219 IAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             +S +I +LC+  +  E +    + +K    PD ++YT L+ G+C+ GN   A ++F E
Sbjct: 181 YTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSE 240

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   I P+   +S +I  L   G++  A  +F EM++ G EP+ +T+  L+  + K   
Sbjct: 241 MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +K   ++NQM ++G   + +TY  L D  CK G+L+ A ++L+ M RKG   N ST+N 
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           I   + K G++  A ++  +MK+    P+T+TY  LM  +  +       +L +EM +  
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           ++P V T+ +L+   C  G   +  + ++ M+ EK + P ++ Y  +++Q      ++  
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWML-EKGIMPNAATYNSIMKQYCIRNNMRIS 479

Query: 518 EELVEKMVDRG 528
            E+   M  +G
Sbjct: 480 TEIYRGMCAQG 490



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 2/347 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           ++ L+  + + G    A   F+ ME     PD IAFS +I  L    +  EA   F+ + 
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K  FEPD + YT L+ G+C+ G + +A  +  +M   G+ PNV TY+ + D LC+ G++ 
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A+++  EM   G + N  T+N ++    KA    + +++  +MK  G   DTITY  L+
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D + K G++  A ++L  M+ +G  P   TFN++   +   G +    R+   M +    
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN  TYN +M+ +    +  +  ++ + M    V P+ NTY ILI  +C   +   A+  
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFL 517

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            +EM+E++     +S Y  +++   +  +L +  +L E+M   G  A
Sbjct: 518 HKEMVEKR-FNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVA 563



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 178/382 (46%), Gaps = 38/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR------------ 232
            F +  +  V AGL  EA   F+++  YG A    + ++ ++ L  KR            
Sbjct: 41  VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSE 100

Query: 233 ------------------------RASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
                                   +  EA      ++ K   PDV+ YT ++ G+C  G 
Sbjct: 101 FPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGE 160

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +  ++ +EM++ G++PN+YTYS +I  LC+ G++     V  EM++ G  P+ + +  
Sbjct: 161 LQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTT 220

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K   T+   +++++M+      D+I ++ LI      GK+ +A K+ N M++KG
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T+  +     KLG++  A  ++ +M  +   PN VTY  L      S   D   
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L  EM    ++ N++TY  ++   C  G+   A K + EM +E  L P +  Y  ++  
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEM-KEAGLHPDTITYTTLMDA 399

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
             + G++ K  EL+ +M+DRG 
Sbjct: 400 YYKTGEMVKARELLREMLDRGL 421



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 8/385 (2%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y  +I+   K+     A+     M++R +      FS L+     +G   EA   
Sbjct: 213 PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKL 272

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF---DSLKDKFEPDVIVYTNLVRGW 262
           FN M + G  PD++ ++ +I   C+     +A  FF     ++    P+V+ YT L  G 
Sbjct: 273 FNEMIKKGFEPDEVTYTALIDGYCKLGEMKKA--FFLHNQMVQIGLTPNVVTYTALADGL 330

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C++G +  A  +  EM   G+Q N+ TY+ +++ LC+ G I +A  +  EM E G  P++
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+  LM  + K     K  ++  +M   G +   +T+N L++  C  GKLED  ++L  
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M+ KG  PNA+T+N I +      ++  +  +Y  M      P++ TYNIL++    +++
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                 L KEM E       ++Y  LI  +        A +   EM  E  L   + +Y 
Sbjct: 511 MKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG-LVASAEIYN 569

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDR 527
           + +      G ++   EL ++ +++
Sbjct: 570 LFVDMNYEEGNMETTLELCDEAIEK 594


>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
          Length = 508

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 194/403 (48%), Gaps = 36/403 (8%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L    W  +     HS D Y   +++ GK +++D    F++ M+   + +T++T + ++
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIM 162

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RR+  AG   EAV  F+R+ E+G   +  + ++++  LC+++R  +A+     LK    P
Sbjct: 163 RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP 222

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   +   + GWC+A  + EA    +EMK  G +P V +Y+ +I   C+  +  + +++ 
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           +EM   G  PNSIT+  +M         E+ L+V  +MKR GC+ D++ YN LI    + 
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+LE+A +V                   FR                +M +L    NT TY
Sbjct: 343 GRLEEAERV-------------------FRV---------------EMPELGVSINTSTY 368

Query: 431 NILMQMFATSKSTDMVLKLKKEME-ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           N ++ M+      D  ++L KEME  N   P+V+TY+ L+      G      K ++EM+
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
            +  L    S Y  ++Q+L RA   +    L E+M+ +  T R
Sbjct: 429 TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 192/368 (52%), Gaps = 4/368 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK R  D     ++ M++R V+  V +++I +R   +A    EA H   +ME+ GC PD 
Sbjct: 217 GKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDV 276

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFRE 277
           +  +++I +LC   R S+A++ F  +K   + PD + Y  L+     +G+      V+  
Sbjct: 277 VTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNA 336

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   G   N+ +Y+ V+DALC+ G++  A  VF EM E G  P   ++N+L+   +KA  
Sbjct: 337 MVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADM 396

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            ++ L+++N M   G   +  T+   I+ + K G+   AI+    M  KG  P+ +  N 
Sbjct: 397 FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANA 456

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   ++  G +  A R++ ++K +   P+T+TY ++++  + +   D  +    +M E+ 
Sbjct: 457 VLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESG 516

Query: 458 VEPNVNTYRILI-TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
             P+V     LI T+Y G G  N A++   ++ E K ++P +  Y  +L  L R G++++
Sbjct: 517 CVPDVLALNSLIDTLYKG-GKGNEAWQLFHKLKEMK-IEPTNGTYNTLLSGLGREGKVKE 574

Query: 517 HEELVEKM 524
             +L+E+M
Sbjct: 575 VMQLLEEM 582



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 2/343 (0%)

Query: 167  AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            A    +  K   V +   +++ L+R  V   L   A   F  M+  GC PD+  +++++ 
Sbjct: 750  AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 809

Query: 227  ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             + +  R  E       +  K +E   + Y  ++ G  ++  + +A  ++  +   G  P
Sbjct: 810  AMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 869

Query: 286  NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
               TY  ++D L + G++  A ++F EMLE GCEPN   +N L+  H  A  TE V Q++
Sbjct: 870  TPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLF 929

Query: 346  NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             +M   G   D  +Y  LID  C  G+L D +     +   G  P+   +N++   + K 
Sbjct: 930  EKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKS 989

Query: 406  GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
              +  A  ++ +MK     PN  TYN L+     +       ++ +E+     +P+V TY
Sbjct: 990  ERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTY 1049

Query: 466  RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
              LI  Y   G  +NAY    +MI   C +P SS Y  +  QL
Sbjct: 1050 NALIRGYSVSGSTDNAYAAYGQMIVGGC-QPNSSTYMQLPNQL 1091



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 178/350 (50%), Gaps = 9/350 (2%)

Query: 185  TFSILVRRYVRAGLAAEAVHAFNRMEEY----GCAPDKIAFSIVISILCRKRRASEAQSF 240
            T   ++  +V+ GL  EA+H    ++EY    GC  DK +F  ++  + +K    ++  F
Sbjct: 662  TLCTILPSFVKNGLMKEALHT---VKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEF 718

Query: 241  FDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
             +++  +    +      L+R  C+     EA ++F + K  G+     +Y+ +I  L  
Sbjct: 719  AENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVD 778

Query: 300  CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
               I  A D+F EM  +GC P+  T+N ++    K+ R E++L+V  +M R G E+  +T
Sbjct: 779  ENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVT 838

Query: 360  YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
            YN +I    K  +LE AI +  +++ +G +P   T+  +   + K G +  A  ++ +M 
Sbjct: 839  YNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEML 898

Query: 420  DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
            +  CEPN   YNIL+     + +T+ V +L ++M E  + P++ +Y ILI   C  G  N
Sbjct: 899  EYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLN 958

Query: 480  NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +   Y R++  E  L+P   VY +++  L ++ ++++   L  +M  +G 
Sbjct: 959  DGLCYFRQL-HELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGI 1007



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 183/390 (46%), Gaps = 10/390 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLA-GKVRQFDLAWHFIDLMKSRNVEITVDTF-S 187
           + L  F     +P  VH+ +  + M+ L     R  D+A  F DLM+ + V+  V TF +
Sbjct: 83  EALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVF-DLMQKQVVKTNVGTFAT 141

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KD 246
           I     V  GL +  V A   M E G + +   ++ +I  L +    +EA   + ++ +D
Sbjct: 142 IFGGVGVEGGLRSAPV-ALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVED 200

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P V  Y+ L+  + +  ++     +  EM+  G++PNVY+Y+I I  L +  +   A
Sbjct: 201 GISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEA 260

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + +  +M + GC+P+ +T   +++V   A R      V+ +MK    + D +TY  L+D 
Sbjct: 261 YHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDK 320

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
               G  +  ++V N+MV  G N N  ++  +   + ++G V+ A  ++ +MK+    P 
Sbjct: 321 CGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPE 380

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             +YN L+  F  +   D  L+L   M      PN  T+ + I  Y   G    + K I+
Sbjct: 381 QYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYY---GKSGQSLKAIQ 437

Query: 487 --EMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
             E ++ K + P  +    VL  L  +G+L
Sbjct: 438 RYEHMKSKGIVPDVAAANAVLYSLAGSGRL 467



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 145/303 (47%), Gaps = 2/303 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K   FD A    + M +        T  + +  Y ++G + +A+  +  M+
Sbjct: 384 YNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMK 443

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD  A + V+  L    R   A+  F  LK     PD I YT +++   +A    
Sbjct: 444 SKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKAD 503

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA   F +M  +G  P+V   + +ID L + G+   A  +F ++ E+  EP + T+N L+
Sbjct: 504 EAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLL 563

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  + ++V+Q+  +M R     + ITYN ++DC  K+G++  AI +L SM  KGC 
Sbjct: 564 SGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCA 623

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ S++N +   + K   +  A RM+ +MK +   P+  T   ++  F  +      L  
Sbjct: 624 PDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHT 682

Query: 450 KKE 452
            KE
Sbjct: 683 VKE 685



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 125/249 (50%), Gaps = 7/249 (2%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +I+   K ++ + A      + S     T  T+  L+   +++G   +A + FN M 
Sbjct: 839  YNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEML 898

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEA----QSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
            EYGC P+   ++I+++     R A       Q F   ++    PD+  YT L+   C AG
Sbjct: 899  EYGCEPNCTIYNILLN---GHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAG 955

Query: 267  NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
             +++    FR++   G++P++  Y+++ID L +  +I  A  +F EM + G  PN  T+N
Sbjct: 956  RLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYN 1015

Query: 327  NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +L+    KA +  +  Q+Y ++ R G +    TYN LI  +   G  ++A      M+  
Sbjct: 1016 SLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVG 1075

Query: 387  GCNPNASTF 395
            GC PN+ST+
Sbjct: 1076 GCQPNSSTY 1084



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 1/168 (0%)

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N++++     G++ D  +V + M ++    N  TF  IF  +   G +  A      M++
Sbjct: 105 NYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMRE 164

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                N  TYN L+     S      +++ K M E+ + P+V TY +L+  +      + 
Sbjct: 165 AGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDT 224

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               + EM E + +KP    Y + ++ L +A +  +   ++ KM D G
Sbjct: 225 VLWLLNEM-EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSG 271


>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 524

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 189/376 (50%), Gaps = 7/376 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILV 190
            +FF W   +  +V S   YH MI++ GK+R+FD AW  ID M+  +   +   T  I++
Sbjct: 94  FTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMI 153

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           R+Y       +A++ F+  + +        F  ++S LCR +  S+A+      KD +  
Sbjct: 154 RKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPF 213

Query: 251 DVIVYTNLVRGWCRA-GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           D   +  ++ GWC   G+  EAERV+ EM   G++ +V +YS +I    + G + +   +
Sbjct: 214 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 273

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR-LGCEADTITYNFLIDCHC 368
           F  M +   EP+   +N ++    KAS   +   +   M+   G E + +TYN LI   C
Sbjct: 274 FDRMKKESIEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLC 333

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  K E+A +V + M+ KG  P   T++   R +    +V     +  KM+ + C+P   
Sbjct: 334 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCQPTVD 390

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY +L++     +  D VL L  EM+E  V P++++Y ++I      G    AY Y +EM
Sbjct: 391 TYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 450

Query: 489 IEEKCLKPGSSVYEMV 504
            +EK ++P  +V +M+
Sbjct: 451 -KEKGMRPNENVEDMI 465



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 23/273 (8%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           N+ G  R+ +  W     M+  NV +  D  ++S ++  Y + G   + +  F+RM++  
Sbjct: 227 NVIGSPREAERVW-----MEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKES 281

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEA 271
             PD+  ++ VI  L +    SEA++   +++++   EP+V+ Y +L++  C+A    EA
Sbjct: 282 IEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEA 341

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           ++VF EM   G+ P + TY   +  L R G+     ++ A+M ++GC+P   T+  L+R 
Sbjct: 342 KQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE--EVFELLAKMRKMGCQPTVDTYIMLIRK 398

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             +    + VL ++N+MK  G   D  +Y  +I     +GK+E+A      M  KG  PN
Sbjct: 399 LCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPN 458

Query: 392 ASTFNMI-----------FRCISKLGDVNGAHR 413
            +  +MI            R I   GDV+G  +
Sbjct: 459 ENVEDMIQSWFSGKQYAEQRVIDSKGDVSGVDK 491



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 127/257 (49%), Gaps = 6/257 (2%)

Query: 185 TFSILVRRYVRA-GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           +F+I++  +    G   EA   +  M   G   D +++S +IS   +    ++    FD 
Sbjct: 217 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 276

Query: 244 LK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCG 301
           +K +  EPD  VY  ++    +A  +SEA  + + M+   G++PNV TY+ +I  LC+  
Sbjct: 277 MKKESIEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKAR 336

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   A  VF EMLE G  P   T++  MR+       E+V ++  +M+++GC+    TY 
Sbjct: 337 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFELLAKMRKMGCQPTVDTYI 393

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C+    ++ + + N M  KG  P+ S++ ++   +   G +  A+  Y +MK+ 
Sbjct: 394 MLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEK 453

Query: 422 KCEPNTVTYNILMQMFA 438
              PN    +++   F+
Sbjct: 454 GMRPNENVEDMIQSWFS 470



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 116/254 (45%), Gaps = 5/254 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE-PNSITFNNLMRVHVKASR 337
           K  G   +V  Y  +I  L +  +   A  +  EM +      NS T   ++R +     
Sbjct: 102 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 161

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP-NASTFN 396
             K +  ++  KR   E     +  L+   C+   + DA  ++     K   P +A +FN
Sbjct: 162 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLI--FCNKDTYPFDAKSFN 219

Query: 397 MIFR-CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           ++     + +G    A R++ +M ++  + + V+Y+ ++  ++   S + VLKL   M++
Sbjct: 220 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 279

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             +EP+   Y  +I         + A   ++ M EEK ++P    Y  +++ L +A + +
Sbjct: 280 ESIEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTE 339

Query: 516 KHEELVEKMVDRGF 529
           + +++ ++M+++G 
Sbjct: 340 EAKQVFDEMLEKGL 353


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 185/373 (49%), Gaps = 2/373 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M++   K  +FD A   I  M+ R V   V T ++L+    RAG    A+   + M   G
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
             P  + F+ V+  LC+ RR  +A+  F ++      PDV  +  L+ G+CR G + EA 
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           + ++EM+  G+ P+V ++S +I      G++  A     EM  +G  P+ + +  ++   
Sbjct: 283 KFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +A    + L+V ++M  LGC  D +TYN L++  CK  +L DA ++LN M  +G  P+ 
Sbjct: 343 CRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDL 402

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  +     + G+   A +++  +   +  P+ V YN L+             +L  +
Sbjct: 403 CTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDD 462

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M   E+ PN  TY ILI  +C  G    A+ ++ EM+ +  L P    Y  +++   R+G
Sbjct: 463 MHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL-PNIMTYNSIIKGYCRSG 521

Query: 513 QLQKHEELVEKMV 525
            ++K ++ ++KM+
Sbjct: 522 NVKKGQQFLQKMM 534



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 191/407 (46%), Gaps = 37/407 (9%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K R+FD A      M   +V   V +F+IL+  + R G   EA+  +  M++ G  PD +
Sbjct: 239 KHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVV 298

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           +FS +I +   + +   A ++   +K     PD ++YT ++ G+CRAG++SEA RV  EM
Sbjct: 299 SFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              G  P+V TY+ +++ LC+  ++  A ++  EM E G  P+  TF  L+  + +    
Sbjct: 359 VGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNF 418

Query: 339 EKVLQVYNQMKRLGCEADTITYN-----------------------------------FL 363
           EK LQ+++ +       D + YN                                    L
Sbjct: 419 EKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSIL 478

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID HC+ G++E+A   L+ MV KG  PN  T+N I +   + G+V    +   KM     
Sbjct: 479 IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNI 538

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ +T+N L+  +   ++      +   ME+  V+P+  TY ++I  +   G+   A +
Sbjct: 539 LPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGR 598

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             ++M     ++P    Y  ++     AG  ++  +L ++M+ RGF 
Sbjct: 599 VFKKM-GASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFA 644



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 174/350 (49%), Gaps = 3/350 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ +I+   +    D A   +D M ++ ++  + TF+ +++   +     +A   
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M++   APD  +F+I+I   CR     EA  F+  ++ +   PDV+ ++ L+  +  
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A    REMK  G+ P+   Y++VI   CR G ++ A  V  EM+ +GC P+ +T
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K  R     ++ N+MK  G   D  T+  LI  +C+DG  E A+++ ++++
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +   P+   +N +   + + GD+  A+ ++  M   +  PN VTY+IL+         +
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                  EM      PN+ TY  +I  YC  G+     +++++M+++  L
Sbjct: 490 EAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNIL 539



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 142/280 (50%), Gaps = 1/280 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ L+    +     +A    N M+E G  PD   F+ +I   CR     +A   FD
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFD 426

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +L   +  PDV+ Y +L+ G CR G++++A  ++ +M    I PN  TYSI+ID+ C  G
Sbjct: 427 TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKG 486

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           Q+  A     EM+  G  PN +T+N++++ + ++   +K  Q   +M +     D IT+N
Sbjct: 487 QVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFN 546

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K+  +  A  V N M ++   P+A T+NMI    S+ G++  A R++ KM   
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             EP+  TY  L+    T+ ++    +L  EM      P+
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 147/316 (46%), Gaps = 2/316 (0%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERV 274
           P    F ++I    + R+  EA   F  L D   P        L+    RAG    AE  
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           +R +  +  + N YT +I++ + C+  +  +A  V +EM +    P+ +T N L+    +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A   +  + + + M   G +   +T+N ++   CK  + + A +V  +M +    P+  +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           FN++     ++G+V  A + Y +M+     P+ V+++ L+ +F+T    D      +EM+
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              + P+   Y ++I  +C  G  + A +   EM+   CL P    Y  +L  L +  +L
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL-PDVVTYNTLLNGLCKQHRL 383

Query: 515 QKHEELVEKMVDRGFT 530
              EEL+ +M +RG T
Sbjct: 384 LDAEELLNEMKERGVT 399



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 1/301 (0%)

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           + R+R AS  +     L     P   V+  L+R + ++    EA   FR +    +    
Sbjct: 63  MSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPA 122

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
              + ++ AL R G    A + +  +L    E N+ T N ++  + K+   +K   V ++
Sbjct: 123 SASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISE 182

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M++     D +T+N LID   + G ++ AI +++SM  KG  P   TFN + + + K   
Sbjct: 183 MEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRR 242

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
            + A  ++  M      P+  ++NIL+  F      +  +K  KEM++  V P+V ++  
Sbjct: 243 FDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSC 302

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI ++   G  ++A  Y+REM +   L P   +Y MV+    RAG + +   + ++MV  
Sbjct: 303 LIGLFSTRGKMDHAAAYLREM-KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGL 361

Query: 528 G 528
           G
Sbjct: 362 G 362


>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
 gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 191/382 (50%), Gaps = 5/382 (1%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           +  L  F W   +  +VH+P LY  ++++ GK ++F + W  ++ M   N +++  T SI
Sbjct: 80  ITALGVFIWAKNQTGYVHTPRLYDLVVDILGKCKKFGIMWKVVNEMNELNGQVSFSTMSI 139

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           +VRR   +G+  + +     +E+Y    D +A ++V+  L ++  A +A S F   KD  
Sbjct: 140 VVRRLASSGMYKDVIDVLRGLEKYRVKKDTVALNMVMHALAKQGGAKDAYSVFLEFKDSI 199

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
             D   +  L+ G+C A  + +A +   EM+  G +P+  +Y+  I A C+         
Sbjct: 200 TLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEV 259

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM E GCEP+ I ++  +R   KA +  + L+VY +M +  C+ D   ++ LI    
Sbjct: 260 ILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLG 319

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFN-MIFR-CISKLGDVNGAHRMYGKMKDLKCEPN 426
           + G+L DA  V   M   G + +  T+N MI+  C ++ G  N A ++  +M+   C+P+
Sbjct: 320 RSGRLNDAWYVFEDMENHGVSRDLWTYNAMIYHACANRQG--NSALKLLERMEVNSCKPD 377

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TY  L++M    K   ++  L   M  N V  +++TY +LI      G   +A  + +
Sbjct: 378 LETYQPLLKMCCKMKDMKVLKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHACFFFQ 437

Query: 487 EMIEEKCLKPGSSVYEMVLQQL 508
           + +    + P    YE++L++L
Sbjct: 438 DAVLNGIV-PKDRTYEILLKEL 458



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 37/258 (14%)

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +V  EM     Q +  T SIV+  L   G      DV   + +   + +++  N +M   
Sbjct: 120 KVVNEMNELNGQVSFSTMSIVVRRLASSGMYKDVIDVLRGLEKYRVKKDTVALNMVMHAL 179

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K    +    V+ + K      D+ ++N LI  +C+   L+DA K +  M + G  P+A
Sbjct: 180 AKQGGAKDAYSVFLEFKD-SITLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDA 238

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
           S++    +   K  D      +  +M +  CEP+ + Y+I ++    ++  +  L++ ++
Sbjct: 239 SSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEK 298

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M +N  +P+   +  LI +                                    L R+G
Sbjct: 299 MNKNSCKPDAKFFSTLIYV------------------------------------LGRSG 322

Query: 513 QLQKHEELVEKMVDRGFT 530
           +L     + E M + G +
Sbjct: 323 RLNDAWYVFEDMENHGVS 340


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 212/440 (48%), Gaps = 51/440 (11%)

Query: 139 TARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA 196
           T R      P L  Y  +I+   K R+ D A    + MK++ +   V +++ L+  +  +
Sbjct: 447 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLS 506

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVY 255
           G   +A   FN M + G  PD    S++I +LC+K +  EA    +  ++     DV+  
Sbjct: 507 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTC 566

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT-------------------------- 289
           T LV+G C    IS+A ++F +M+  G  PNV T                          
Sbjct: 567 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 626

Query: 290 ---------------YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
                          YSI+ID LC+CG+   A ++F EM  +G  P+ I++ +L+    +
Sbjct: 627 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 686

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           + + +    ++N+M  +G + D  T++ LID  CK+GK+ +A ++L  M+++GC PN  T
Sbjct: 687 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 746

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +  + + +     ++ A +++ KM+ L C P+ VTY  LM+    + +    L+L K+M 
Sbjct: 747 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806

Query: 455 EN------EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            +        +P+V +Y I+I   C  G  + A +  +EM +   + P    Y  ++   
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM-KALGVIPNVISYTSLIHGF 865

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            R+G+L+  + L  +MVD+G
Sbjct: 866 CRSGKLEDAKHLFNEMVDQG 885



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 158/279 (56%), Gaps = 9/279 (3%)

Query: 212 YG--CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
           YG  C P+ I++SI+I  LC+  R  EA+  F  +K     PDVI YT+L+ G+CR+G  
Sbjct: 631 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 690

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A+ +F EM   G+QP+V T+S++ID LC+ G++  A+++   M++ GC PN++T+  L
Sbjct: 691 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 750

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI----KVLNSMV 384
           ++      R  +  Q++ +M++LGC  D +TY  L+   C+ G ++ A+    K+L+   
Sbjct: 751 VKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTG 810

Query: 385 RKGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           + G N  P+  ++++I   + K G  + A  ++ +MK L   PN ++Y  L+  F  S  
Sbjct: 811 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGK 870

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            +    L  EM +  V+ N  TY ++I  +C  G  + A
Sbjct: 871 LEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/515 (22%), Positives = 224/515 (43%), Gaps = 130/515 (25%)

Query: 139 TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           + RP+ V +  +  +++   GKV +   A   +++M  R   + + T+S L++       
Sbjct: 49  SIRPD-VTTSSMLIDILCKEGKVIE---ANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 104

Query: 199 AAEAVHAFNRMEEYGCAPDK---------------------------------------- 218
            +EA   F  M++ GC PD                                         
Sbjct: 105 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 164

Query: 219 -IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            I++SI+I  LC+ RR  EA+  F  +K +   PDVI YT+L+ G+C +G   +A+ +F 
Sbjct: 165 LISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFN 224

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EM   GIQP+V T  ++ID  C+ G++  A+++   M+  GC  + +T++ L++      
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284

Query: 337 RTEKVLQVYNQMKRLGCEADTITY------------------------------------ 360
           R  +  Q++  MK+LGC  D I Y                                    
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIR 344

Query: 361 ------NFLIDCHCKDGKLEDAIKVLNSMVRKG--------------------------- 387
                 + LID  CK+GK+ +A ++L  M+++G                           
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404

Query: 388 --------CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD------LKCEPNTVTYNIL 433
                   C P+A T+  + + + + G++N A +++ +M +      +KC+P  ++Y+I+
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +      +  D   +L +EM+   + P+V +Y  LI  +C  G W  A     EM++   
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG- 523

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++P  +   +++  L + G++ +  +L+E ++ RG
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 558



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 188/394 (47%), Gaps = 49/394 (12%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T S+L+    + G   EA      M + GC  D + +S +I  LC + R SEA   F 
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 406

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM----KMAGIQ--PNVYTYSIVID 295
           S+ K    PD I Y  L++G C+ GNI+ A ++ +EM       GI+  P + +YSI+ID
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 466

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            LC+  +   A ++F EM   G  P+ I++  L+     + + EK   ++N+M  +G + 
Sbjct: 467 GLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 526

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D  T + LID  CK GK+ +A K+L  ++++GC  +  T   + + +     ++ A +++
Sbjct: 527 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF 586

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK------------------------- 450
            KM+ L C PN VT   LM+    S +  + L+L                          
Sbjct: 587 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 646

Query: 451 ----------------KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                           KEM+   V P+V +Y  LI  +C  G W +A     EM++   +
Sbjct: 647 DGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG-V 705

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +P  + + +++  L + G++ +  EL+E M+ RG
Sbjct: 706 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 177/367 (48%), Gaps = 18/367 (4%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+ +    L H   + +GK   ++ A    + M    ++  V T  +L+  + + G   E
Sbjct: 198 PDVISYTSLIHGFCH-SGK---WEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIE 253

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVR 260
           A      M   GC  D + +S +I  LC K R SEA   F S+K     PD I Y  L++
Sbjct: 254 ANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMK 313

Query: 261 GWCRAGNISEAERVFREM-------KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           G C+ G I+ A  + +EM        +  I+P+V T S++ID LC+ G++  A+++   M
Sbjct: 314 GLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVM 373

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           ++ GC  + +T++ L++      R  +   ++  M++LGC  D ITY  L+   C+ G +
Sbjct: 374 IQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNI 433

Query: 374 EDAIKV----LNSMVRKG--CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
             A+++    LN   R G  C P   ++++I   + K    + A  ++ +MK     P+ 
Sbjct: 434 NIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDV 493

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           ++Y  L+  F  S   +    L  EM +  ++P+V T  +LI M C  G    A K +  
Sbjct: 494 ISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEV 553

Query: 488 MIEEKCL 494
           +I+  C+
Sbjct: 554 VIQRGCI 560



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 167/366 (45%), Gaps = 22/366 (6%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI---------VISILCRKRRAS 235
           TF+IL+          E + A   +   G  PD + +SI         +I ILC++ +  
Sbjct: 12  TFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVI 71

Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA    + +  +    D++ Y+ L++G C    ISEA  +F  M+  G +P+  TY  ++
Sbjct: 72  EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 131

Query: 295 DALCRCGQITRAHDVFAEMLE------VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
             LC+ G I  A  +  EML       + C+P  I+++ ++    K  R ++  +++ +M
Sbjct: 132 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEM 191

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           K  G   D I+Y  LI   C  GK E A  + N M+  G  P+ +T  ++     K G V
Sbjct: 192 KAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKV 251

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A+ +   M    C  + VTY+ L++            +L   M++    P+   Y  L
Sbjct: 252 IEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTL 311

Query: 469 ITMYCGMGHWNNAYKYIREMIEE------KCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           +   C  G  N A    +EM+ +      KC++P  +   M++  L + G++ +  EL+E
Sbjct: 312 MKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLE 371

Query: 523 KMVDRG 528
            M+ RG
Sbjct: 372 VMIQRG 377



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 145/276 (52%), Gaps = 9/276 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A      MK+  V   V +++ L+  + R+G   +A + FN M 
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   FS++I +LC++ +  EA    + +  +   P+ + YT LV+G C    IS
Sbjct: 702 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRIS 761

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE------VGCEPNSI 323
           EA ++F +M+  G  P+V TY  ++  LC+ G I  A ++  +ML          +P+ I
Sbjct: 762 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 821

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +++ ++    K  R ++  +++ +MK LG   + I+Y  LI   C+ GKLEDA  + N M
Sbjct: 822 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 881

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           V +G   NA T++++     K G ++ A  ++ KM+
Sbjct: 882 VDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 147/321 (45%), Gaps = 57/321 (17%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGN 267
           M   G  PD   F+I+I+ LC  +R +E  +     ++  + PD++ Y+           
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYS----------- 49

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
                          I+P+V T S++ID LC+ G++  A+++   M++ GC  + +T++ 
Sbjct: 50  ---------------IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 94

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L++      R  +   ++  M++LGC  D ITY  L+   C+ G +  A+++   M    
Sbjct: 95  LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM---- 150

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                               +N   R YG    +KC+P  ++Y+I++      +  D   
Sbjct: 151 --------------------LNDTGR-YG----IKCKPTLISYSIIIDGLCKDRREDEAR 185

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L KEM+   + P+V +Y  LI  +C  G W  A     EM++   ++P  +   +++  
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG-IQPDVTTSGVLIDM 244

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
             + G++ +  EL+E MV RG
Sbjct: 245 FCKEGKVIEANELLEVMVHRG 265


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 1/339 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K ++   A   ++ + +     T+ T++ L+    + G   EA+    ++ 
Sbjct: 37  YTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 96

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD + ++ +I  L +K+R+ EA   F  +  +    D + YT L+RG  +AG I 
Sbjct: 97  DNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIP 156

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  V++ M   G  P+V T S +ID LC+ G+I  A  +F  M   G  PN + ++ L+
Sbjct: 157 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 216

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA + +  L++  QMK+  C  DTITYN LID  CK G +  A    + M+  GC 
Sbjct: 217 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK 276

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N++     K G+ + A  ++  M   +C PN VTY  L+      +        
Sbjct: 277 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLY 336

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            + M+E    P+   Y  L+   C  G          EM
Sbjct: 337 YQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 375



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 173/354 (48%), Gaps = 2/354 (0%)

Query: 176 SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
           +    I + T++ +V    +     EAV    ++   GC P    ++ +++ LC+  R  
Sbjct: 27  TNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 86

Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA      + D    PDV+ YT+L+ G  +     EA ++F+EM   G+  +   Y+ +I
Sbjct: 87  EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALI 146

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
             L + G+I +A  V+  M   GC P+ +T + ++    KA R    ++++  M+  G  
Sbjct: 147 RGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLA 206

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            + + Y+ LI   CK  K++ A+++L  M +  C P+  T+N++   + K GDV  A   
Sbjct: 207 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAF 266

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M +  C+P+  TYNIL+  F  + +TD    +  +M  +   PNV TY  LI+  C 
Sbjct: 267 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCK 326

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                 A  Y + M E  C  P S VY  ++  L ++G+L+    L ++M   G
Sbjct: 327 RRQLTKASLYYQHMKERGC-PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 379



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TFSIL+   V+AG+  +A          GC  D   ++ ++  L + ++  EA +  + +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +   P +  Y  L+ G C+ G + EA  + R++   G  P+V TY+ +ID L +  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A+ +F EM   G   +++ +  L+R  ++A +  +   VY  M   GC  D +T + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK G++  A+++  SM  +G  PN   ++ +   + K   ++ A  M  +MK   C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+T+TYNIL+     S           EM E   +P+V TY ILI+ +C  G+ + A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +M   +C  P    Y  ++  L +  QL K     + M +RG
Sbjct: 301 VFDDMSSSRC-SPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG 344



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 3/235 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K R+ D A   +  MK         T++IL+    ++G  A A   F+ M
Sbjct: 211 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEM 270

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            E GC PD   ++I+IS  C+      A   FD +   +  P+V+ Y  L+ G C+   +
Sbjct: 271 LEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQL 330

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           ++A   ++ MK  G  P+ + YS ++D LC+ G++     +F EM   G   NS T   L
Sbjct: 331 TKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRL 389

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +    KA+R ++ + ++N +++ G       YN +I    K GK+ +   V   M
Sbjct: 390 IFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 165/324 (50%), Gaps = 2/324 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M +R  +  V T++ ++    + G    A   F +M E GC PD + +S +I  LC+ RR
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            +EA   F  +K K   P++  Y +L++G C      EA  +  EM    I PN+ T+S+
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I+  C+ G +  A  V   M E+G EPN +T+++LM  +   +   +  ++++ M   G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C+ D  +YN LI+ +CK  ++ +A ++ N M+ +G  P+  ++N +   + +LG +  AH
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  M      P+  TY+IL+  F          +L + M+   ++PN+  Y ILI   
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 473 CGMGHWNNAYKYIREMIEEKCLKP 496
           C   +   A K   E+  +  L+P
Sbjct: 301 CKSRNLKEARKLFSELFVQG-LQP 323



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 140/277 (50%), Gaps = 1/277 (0%)

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           ++PDV  YT ++ G C+ G    A  +F++M  AG QP+V TYS +ID+LC+  ++  A 
Sbjct: 6   YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           D+F+ M   G  PN  T+N+L++     SR  +   + N+M  L    + +T++ LI+  
Sbjct: 66  DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK+G + +A  VL +M   G  PN  T++ +    S   +V  A +++  M    C+P+ 
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV 185

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            +YNIL+  +  +K      +L  EM    + P++ +Y  LI   C +G    A+   + 
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           M+    L P    Y ++L    + G L K   L   M
Sbjct: 246 MLTNGNL-PDLCTYSILLDGFCKQGYLAKAFRLFRAM 281



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 1/247 (0%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G QP+V+TY+ +I+ LC+ G+   A  +F +M E GC+P+ +T++ ++    K  R  + 
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L +++ MK  G   +  TYN LI   C   +  +A  +LN M+     PN  TF+++   
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             K G+V  A  +   M ++  EPN VTY+ LM  ++         KL   M     +P+
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V +Y ILI  YC       A +   EMI +  L P    Y  ++  L + G+L++  +L 
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQG-LTPDIVSYNTLIDGLCQLGRLREAHDLF 243

Query: 522 EKMVDRG 528
           + M+  G
Sbjct: 244 KNMLTNG 250


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 192/384 (50%), Gaps = 4/384 (1%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y     L    K R FD A    + M+ R+  +   T+++++    R+G   EA   
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
              M +YG +PD   +  +++ LC+  R  EA++  D +     +P+V+VY  LV G+ +
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMK 362

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G  +EA  +  EM  AG+QPN   Y  +I  LC+ GQ+ RA  +  EM++VG  P++ T
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ LM+ H +    +   ++ N+M+  G   +  TY  +I+  C++G+ ++A  +L  M+
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  PNA  +  +    SK G ++ A      M      P+   YN L++  +T    +
Sbjct: 483 SEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIE 542

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              +   ++++  + P+  TY  LI  YC   +   A + +++M+    LKP +  Y  +
Sbjct: 543 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG-LKPNADTYTDL 601

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           L+   ++   +K   +++ M+  G
Sbjct: 602 LEGYFKSNDHEKVSSILQSMLGSG 625



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 177/371 (47%), Gaps = 2/371 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           +    +L W     M+   +   V T+S  +  + +A     A   F  M    CA +++
Sbjct: 222 RADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEV 281

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++++IS LCR     EA  F + + D    PD   Y  L+ G C+ G + EA+ +  EM
Sbjct: 282 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM 341

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
             +G++PNV  Y+ ++D   + G+   A D+  EM+  G +PN I ++NL+R   K  + 
Sbjct: 342 SCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQL 401

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            +  ++ N+M ++G   DT TY+ L+  H +    + A ++LN M   G  PNA T+ ++
Sbjct: 402 GRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIM 461

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + + G+   A  +  +M     +PN   Y  L+   +      +  +  + M +  V
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P++  Y  LI     +G    A +Y  + ++++ L P    Y  ++    +   L+K +
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQ-VQKRGLVPDEFTYSGLIHGYCKTRNLEKAD 580

Query: 519 ELVEKMVDRGF 529
           +L+++M++ G 
Sbjct: 581 QLLQQMLNSGL 591



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 10/346 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
              +LV  Y + G    A      M + G AP +   + ++  L R    ++A      L
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLR----ADAMELVWKL 232

Query: 245 KDKFE-----PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           K   E     PDV  Y+  +   C+A +   A++VF EM+      N  TY+++I  LCR
Sbjct: 233 KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G +  A     EM++ G  P++ T+  LM    K  R ++   + ++M   G + + + 
Sbjct: 293 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVV 352

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y  L+D   K+GK  +A  +LN M+  G  PN   ++ + R + K+G +  A ++  +M 
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI 412

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
            +   P+T TY+ LMQ        D   +L  EM  + + PN  TY I+I   C  G   
Sbjct: 413 KVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESK 472

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            A   + EMI E  LKP + +Y  ++    + G +    E +E M 
Sbjct: 473 EAGNLLEEMISEG-LKPNAFMYAPLIIGHSKEGHISLACESLENMT 517



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 186/433 (42%), Gaps = 39/433 (9%)

Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F +     ++  SPD   Y  ++N   K  +   A   +D M    ++  V  ++ LV  
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-------- 244
           +++ G AAEA    N M   G  P+KI +  +I  LC+  +   A    + +        
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 245 ----------------KD-KFE-----------PDVIVYTNLVRGWCRAGNISEAERVFR 276
                           KD  FE           P+   Y  ++ G C+ G   EA  +  
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EM   G++PN + Y+ +I    + G I+ A +    M +    P+   +N+L++      
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVG 539

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           R E+  + Y Q+++ G   D  TY+ LI  +CK   LE A ++L  M+  G  PNA T+ 
Sbjct: 540 RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYT 599

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +     K  D      +   M     +P+   Y I+++  + S++ ++   +  E+E+N
Sbjct: 600 DLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P+++ Y  LI+  C M     A   + EM +E  L+PG   Y  ++    R+G + +
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG-LEPGIVCYNALIDGFCRSGDISR 718

Query: 517 HEELVEKMVDRGF 529
              + + ++ +G 
Sbjct: 719 ARNVFDSILAKGL 731



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 177/388 (45%), Gaps = 4/388 (1%)

Query: 146 HSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD +     + G  + +D   A+  ++ M++  +     T+ I++    + G + EA 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGW 262
           +    M   G  P+   ++ +I    ++   S A +S  +  K    PD+  Y +L++G 
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
              G I EAE  + +++  G+ P+ +TYS +I   C+   + +A  +  +ML  G +PN+
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+ +L+  + K++  EKV  +   M   G + D   Y  +I    +   +E A  VL  
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           + + G  P+   ++ +   + K+ D+  A  +  +M     EP  V YN L+  F  S  
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                 +   +    + PN  TY  LI   C  G   +A+   ++M++ + + P + VY 
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLD-RGIAPDAFVYN 774

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++      A  L++   L E+M +RG+ 
Sbjct: 775 VLATGCSDAADLEQALFLTEEMFNRGYA 802



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 11/265 (4%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           + I++R   R+     A      +E+ G  PD   +S +IS LC+     +A    D + 
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K+  EP ++ Y  L+ G+CR+G+IS A  VF  +   G+ PN  TY+ +ID  C+ G IT
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDIT 752

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A D++ +ML+ G  P++  +N L      A+  E+ L +  +M   G  A    ++ L+
Sbjct: 753 DAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YAHVSLFSTLV 811

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC- 423
              CK G+L++  K+L+ M+ +   PNA T   +     K G +  AHR++ +++  K  
Sbjct: 812 RGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKAS 871

Query: 424 EPNTVTYNILMQMFATSKSTDMVLK 448
           + +T  +++L         TDM+ K
Sbjct: 872 QSSTDRFSLLF--------TDMINK 888



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 185/422 (43%), Gaps = 42/422 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MIN   +  +   A + ++ M S  ++     ++ L+  + + G  + A  +   M 
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMT 517

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    PD   ++ +I  L    R  EA+ ++  ++ +   PD   Y+ L+ G+C+  N+ 
Sbjct: 518 KANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLE 577

Query: 270 EAERVFREMKMAGIQPNVYTYS-----------------------------------IVI 294
           +A+++ ++M  +G++PN  TY+                                   IVI
Sbjct: 578 KADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVI 637

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
             L R   +  A  V  E+ + G  P+   +++L+    K +  EK + + ++M + G E
Sbjct: 638 RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLE 697

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
              + YN LID  C+ G +  A  V +S++ KG  PN  T+  +     K GD+  A  +
Sbjct: 698 PGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDL 757

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           Y  M D    P+   YN+L    + +   +  L L +EM  N    +V+ +  L+  +C 
Sbjct: 758 YKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM-FNRGYAHVSLFSTLVRGFCK 816

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL-QKHE---ELVEKMVDRGFT 530
            G      K +  M++ + + P +   E V+ +  +AG+L + H    EL +K   +  T
Sbjct: 817 RGRLQETEKLLHVMMDREIV-PNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSST 875

Query: 531 AR 532
            R
Sbjct: 876 DR 877



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 37/203 (18%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  +I+   K+   + A   +D M    +E  +  ++ L+  + R+G  + A + 
Sbjct: 663 PDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNV 722

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY--------- 255
           F+ +   G  P+ + ++ +I   C+    ++A   +  + D+   PD  VY         
Sbjct: 723 FDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSD 782

Query: 256 -------------------------TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
                                    + LVRG+C+ G + E E++   M    I PN  T 
Sbjct: 783 AADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTV 842

Query: 291 SIVIDALCRCGQITRAHDVFAEM 313
             VI    + G++  AH VFAE+
Sbjct: 843 ENVITEFGKAGKLCEAHRVFAEL 865



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 1/173 (0%)

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           T   + L+D + K+G +  A +V+  M   G  P     N + + + +   +    ++ G
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M+     P+  TY+  ++    ++  D   K+ +EM   +   N  TY ++I+  C  G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               A+ +  EM++   L P +  Y  ++  L + G+L++ + L+++M   G 
Sbjct: 295 AVEEAFGFKEEMVDYG-LSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGL 346



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 1/138 (0%)

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
           +  +++     K G V  A ++   M DL   P     N L++    + + ++V KLK  
Sbjct: 176 AVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGF 235

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           ME   + P+V TY   +  +C    ++ A K   EM    C       Y +++  L R+G
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAM-NEVTYNVMISGLCRSG 294

Query: 513 QLQKHEELVEKMVDRGFT 530
            +++     E+MVD G +
Sbjct: 295 AVEEAFGFKEEMVDYGLS 312


>gi|148906806|gb|ABR16549.1| unknown [Picea sitchensis]
          Length = 524

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 203/422 (48%), Gaps = 11/422 (2%)

Query: 107 ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           +S   V  V++ S G       ++ + FF W   +    HSP  ++ +++L GK + FD 
Sbjct: 102 VSIQFVEDVLKLSYGAG-----MEAMKFFRWSGLKLSRKHSPLAWNLLVDLLGKEKLFDA 156

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            W  I +MK++ + ++++T S +   YV+AG  AEA   F+ +E+YGC  D +A +  +S
Sbjct: 157 MWDCIKVMKNQGI-VSMETMSSVFGNYVQAGKVAEARMTFDVIEQYGCPQDVVALNCFLS 215

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM--KMAGIQ 284
             CR +++ EA  FFD +K+K  PD   Y  L+ G    GN+S+A   F EM  +   + 
Sbjct: 216 AFCRYKQSKEALEFFDKVKEKIAPDADTYALLLEGLEIEGNVSKARTTFGEMIIRHGWLP 275

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
            N   Y+  +  L    Q+  A    A M    C P+   F N +++  +   T+    +
Sbjct: 276 NNTSAYNAFLSTLVNGSQVEEALKFLAVMKTRKCLPDLGFFRNTLQILYQRKDTKNAYGL 335

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDG--KLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +  MK+ G   D  +YN +I   C     +++ A ++L+ MV  G  P+  T+N IF  +
Sbjct: 336 WELMKQSGILLDLPSYNTMIGVFCSANPIQVDFAYRLLDEMVFTGIFPDFKTYNTIFEAL 395

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
                V  A  ++ +M      P    Y + ++M+  +   +M + + K M +  + P  
Sbjct: 396 ITARKVEEASSIFREMTKNDFCPLYANYVMAIKMYFEADDPEMAVMMWKHMIQKAIFPKS 455

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           +   ILI  +C +G  + A KY  E I      P  ++ ++     R+AG+   + +L +
Sbjct: 456 DCAAILIDGFCDLGRASEALKYSLEAITRGVQIPVETMTKLK-NASRQAGKQDAYGQLEK 514

Query: 523 KM 524
           KM
Sbjct: 515 KM 516



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/243 (20%), Positives = 97/243 (39%), Gaps = 3/243 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            ++  +   V      EA+     M+   C PD   F   + IL +++    A   ++ +
Sbjct: 280 AYNAFLSTLVNGSQVEEALKFLAVMKTRKCLPDLGFFRNTLQILYQRKDTKNAYGLWELM 339

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISE--AERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           K      D+  Y  ++  +C A  I    A R+  EM   GI P+  TY+ + +AL    
Sbjct: 340 KQSGILLDLPSYNTMIGVFCSANPIQVDFAYRLLDEMVFTGIFPDFKTYNTIFEALITAR 399

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A  +F EM +    P    +   ++++ +A   E  + ++  M +      +    
Sbjct: 400 KVEEASSIFREMTKNDFCPLYANYVMAIKMYFEADDPEMAVMMWKHMIQKAIFPKSDCAA 459

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID  C  G+  +A+K     + +G      T   +     + G  +   ++  KMK +
Sbjct: 460 ILIDGFCDLGRASEALKYSLEAITRGVQIPVETMTKLKNASRQAGKQDAYGQLEKKMKSI 519

Query: 422 KCE 424
             +
Sbjct: 520 SSQ 522


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 175/337 (51%), Gaps = 2/337 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+        A+EAV   +RM   GC PD   +  V++ LC++     A S    +
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            K K E DV++YT ++   C   N+++A  +F EM   GI+PNV TY+ +I  LC  G+ 
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  + ++M+E    PN +TF+ L+   VK  +  +  ++Y++M +   + D  TY+ L
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C   +L++A  +   M+ K C PN  T+N + +   K   V     ++ +M     
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             NTVTYN L+Q    +   DM  K+ K+M  + V P++ TY IL+   C  G    A  
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL- 469

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            + E +++  ++P    Y ++++ + +AG+++   +L
Sbjct: 470 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 506



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA   +  M+   +E  V  ++ ++          +A++ 
Sbjct: 202 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 261

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  M+  G  P+ + ++ +I  LC   R S+A     D ++ K  P+V+ ++ L+  + +
Sbjct: 262 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 321

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE+++ EM    I P+++TYS +I+  C   ++  A  +F  M+   C PN +T
Sbjct: 322 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 381

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++   KA R E+ ++++ +M + G   +T+TYN LI    + G  + A K+   MV
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T++++   + K G +  A  ++  ++  K EP+  TYNI+++    +   +
Sbjct: 442 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+PNV  Y  +I+ +C  G    A    REM E+  L P S  Y  +
Sbjct: 502 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTL 560

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G      EL+++M   GF  
Sbjct: 561 IRARLRDGDKAASAELIKEMRSCGFVG 587



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 186/396 (46%), Gaps = 4/396 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F   V +RP  + S   ++++++   K+ +FDL     + M++  +   + +++IL+  +
Sbjct: 52  FGEMVQSRP--LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 109

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDV 252
            R      A+    +M + G  PD +  S +++  C  +R SEA +  D +   +++P+ 
Sbjct: 110 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 169

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + +  L+ G       SEA  +   M   G QP+++TY  V++ LC+ G I  A  +  +
Sbjct: 170 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 229

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M +   E + + +  ++            L ++ +M   G   + +TYN LI C C  G+
Sbjct: 230 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 289

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             DA ++L+ M+ +  NPN  TF+ +     K G +  A ++Y +M     +P+  TY+ 
Sbjct: 290 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 349

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F      D    + + M   +  PNV TY  LI  +C         +  REM  ++
Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQR 408

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L   +  Y  ++Q L +AG     +++ +KMV  G
Sbjct: 409 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 175/369 (47%), Gaps = 5/369 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+     +  + A +    M ++ +   V T++ L+R     G  ++A    + M
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 300

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            E    P+ + FS +I    ++ +  EA+  +D + K   +PD+  Y++L+ G+C    +
Sbjct: 301 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 360

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+ +F  M      PNV TY+ +I   C+  ++    ++F EM + G   N++T+N L
Sbjct: 361 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 420

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   +A   +   +++ +M   G   D ITY+ L+D  CK GKLE A+ V   + +   
Sbjct: 421 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N++   + K G V     ++  +     +PN + Y  ++  F      +    
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 540

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG-SSVYEMVLQQ 507
           L +EM+E+   PN  TY  LI      G    + + I+EM    C   G +S   MV+  
Sbjct: 541 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM--RSCGFVGDASTISMVINM 598

Query: 508 LRRAGQLQK 516
           L   G+L+K
Sbjct: 599 LHD-GRLEK 606



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 127/295 (43%), Gaps = 36/295 (12%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A  +F EM  +   P++  ++ ++ A+ +  +      +   M  +    +  ++N 
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    + S+    L V  +M +LG E D +T + L++ +C   ++ +A+ +++ M    
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN  TFN +   +      + A  +  +M    C+P+  TY  ++         D+ L
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 448 KLKKEMEENEVE-----------------------------------PNVNTYRILITMY 472
            L K+ME+ ++E                                   PNV TY  LI   
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           C  G W++A + + +MIE K + P    +  ++    + G+L + E+L ++M+ R
Sbjct: 285 CNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 36/223 (16%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A D+F EM++    P+ + FN L+    K ++ + V+ +  +M+ L    D  +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+C C+  +L  A+ VL                                   GKM  L
Sbjct: 104 ILINCFCRRSQLPLALAVL-----------------------------------GKMMKL 128

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             EP+ VT + L+  +   K     + L  +M   E +PN  T+  LI         + A
Sbjct: 129 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 188

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              I  M+   C +P    Y  V+  L + G +     L++KM
Sbjct: 189 VALIDRMVARGC-QPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 1/159 (0%)

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           D KL+DA+ +   MV+    P+   FN +   I+K+   +    +  +M++L+   +  +
Sbjct: 42  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 101

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YNIL+  F       + L +  +M +   EP++ T   L+  YC     + A   + +M 
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             +  +P +  +  ++  L    +  +   L+++MV RG
Sbjct: 162 VME-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 199


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 180/355 (50%), Gaps = 2/355 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M     +    TF+ L+        A+EAV   +RM   GC PD   +  V++
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A S    + K K E DV++YT ++   C   N+++A  +F EM   GI+P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+ +I  LC  G+ + A  + ++M+E    PN +TF+ L+   VK  +  +  ++Y
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M +   + D  TY+ LI+  C   +L++A  +   M+ K C PN  T+N + +   K 
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             V     ++ +M       NTVTYN L+Q    +   DM  K+ K+M  + V P++ TY
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            IL+   C  G    A   + E +++  ++P    Y ++++ + +AG+++   +L
Sbjct: 469 SILLDGLCKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA   +  M+   +E  V  ++ ++          +A++ 
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 277

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  M+  G  P+ + ++ +I  LC   R S+A     D ++ K  P+V+ ++ L+  + +
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE+++ EM    I P+++TYS +I+  C   ++  A  +F  M+   C PN +T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++   KA R E+ ++++ +M + G   +T+TYN LI    + G  + A K+   MV
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T++++   + K G +  A  ++  ++  K EP+  TYNI+++    +   +
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+PNV  Y  +I+ +C  G    A    REM E+  L P S  Y  +
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTL 576

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G      EL+++M   GF  
Sbjct: 577 IRARLRDGDKAASAELIKEMRSCGFVG 603



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 186/396 (46%), Gaps = 4/396 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F   V +RP  + S   ++++++   K+ +FDL     + M++  +   + +++IL+  +
Sbjct: 68  FGEMVQSRP--LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDV 252
            R      A+    +M + G  PD +  S +++  C  +R SEA +  D +   +++P+ 
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + +  L+ G       SEA  +   M   G QP+++TY  V++ LC+ G I  A  +  +
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M +   E + + +  ++            L ++ +M   G   + +TYN LI C C  G+
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             DA ++L+ M+ +  NPN  TF+ +     K G +  A ++Y +M     +P+  TY+ 
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F      D    + + M   +  PNV TY  LI  +C         +  REM  ++
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQR 424

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L   +  Y  ++Q L +AG     +++ +KMV  G
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 175/369 (47%), Gaps = 5/369 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+     +  + A +    M ++ +   V T++ L+R     G  ++A    + M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            E    P+ + FS +I    ++ +  EA+  +D + K   +PD+  Y++L+ G+C    +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+ +F  M      PNV TY+ +I   C+  ++    ++F EM + G   N++T+N L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   +A   +   +++ +M   G   D ITY+ L+D  CK GKLE A+ V   + +   
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N++   + K G V     ++  +     +PN + Y  ++  F      +    
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG-SSVYEMVLQQ 507
           L +EM+E+   PN  TY  LI      G    + + I+EM    C   G +S   MV+  
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM--RSCGFVGDASTISMVINM 614

Query: 508 LRRAGQLQK 516
           L   G+L+K
Sbjct: 615 LHD-GRLEK 622



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 127/295 (43%), Gaps = 36/295 (12%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A  +F EM  +   P++  ++ ++ A+ +  +      +   M  +    +  ++N 
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    + S+    L V  +M +LG E D +T + L++ +C   ++ +A+ +++ M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN  TFN +   +      + A  +  +M    C+P+  TY  ++         D+ L
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 448 KLKKEMEENEVE-----------------------------------PNVNTYRILITMY 472
            L K+ME+ ++E                                   PNV TY  LI   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           C  G W++A + + +MIE K + P    +  ++    + G+L + E+L ++M+ R
Sbjct: 301 CNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 36/223 (16%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A D+F EM++    P+ + FN L+    K ++ + V+ +  +M+ L    D  +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+C C+  +L  A+ VL                                   GKM  L
Sbjct: 120 ILINCFCRRSQLPLALAVL-----------------------------------GKMMKL 144

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             EP+ VT + L+  +   K     + L  +M   E +PN  T+  LI         + A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              I  M+   C +P    Y  V+  L + G +     L++KM
Sbjct: 205 VALIDRMVARGC-QPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 1/159 (0%)

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           D KL+DA+ +   MV+    P+   FN +   I+K+   +    +  +M++L+   +  +
Sbjct: 58  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YNIL+  F       + L +  +M +   EP++ T   L+  YC     + A   + +M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             +  +P +  +  ++  L    +  +   L+++MV RG
Sbjct: 178 VME-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 203/404 (50%), Gaps = 8/404 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           +VLSF + ++        PD   ++ ++N   ++     A   +D+M     +  + T++
Sbjct: 299 EVLSFIDEMSNEG---FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYN 355

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            L+    + G   EAV   N+M     +P+ + ++ +IS LC++ +  EA      L  K
Sbjct: 356 SLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSK 415

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PDV  + +L++G C   N   A  +F EMK  G  P+ +TY+++ID+LC  G++  A
Sbjct: 416 GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEA 475

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +  EM   GC  N +T+N L+    K  R E+  +++++M+  G   + +TYN LID 
Sbjct: 476 LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDG 535

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK+ ++E+A ++++ M+ +G  P+  T+N +     + GD+  A  +   M    CEP+
Sbjct: 536 LCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPD 595

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           +VTY  L+   + +   ++  +L + ++   +     TY  +I         + A +  R
Sbjct: 596 SVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFR 655

Query: 487 EMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRGF 529
           EM+ EK   P +  Y++V + L    G + +  + + +M D+GF
Sbjct: 656 EMM-EKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGF 698



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 2/350 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           T ++LV  Y + G   E +   + M   G  PD+  F+ +++ LCR      A    D  
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L++ F+PD+  Y +L+ G C+ G + EA  +  +M +    PN  TY+ +I  LC+  Q+
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A ++   +   G  P+  TFN+L++     +     ++++ +MK  GC  D  TYN L
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  C  G+LE+A+ +L  M   GC+ N  T+N +     K   +  A  ++ +M+    
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             N VTYN L+     ++  +   +L  +M    ++P+  TY  L+T +C  G    A  
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAAD 582

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            ++ M    C +P S  Y  ++  L +AG+++    L+  +  +G    P
Sbjct: 583 IVQTMTSNGC-EPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAP 631



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 191/400 (47%), Gaps = 3/400 (0%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           +L   +W + +P FV S  +Y E++   GK   F      +  MK    EI   TF IL+
Sbjct: 88  ILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILI 147

Query: 191 RRYVRAGLAAEAVHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
             Y +  L  EAV   + M EE+G   D   ++ ++++L    +    +     +  +  
Sbjct: 148 ESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGI 207

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV  +  L++  CRA  I  A  +  EM   G+ P+  T++ ++      G +  A  
Sbjct: 208 KPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALR 267

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  +M+  GC  +++T N L+  + K  R E+VL   ++M   G   D  T+N L++  C
Sbjct: 268 IREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLC 327

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           + G ++ A+++L+ M+++G +P+  T+N +   + KLG+V  A  +  +M      PNTV
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTV 387

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TYN L+         +   +L + +    + P+V T+  LI   C   +   A +   EM
Sbjct: 388 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM 447

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + C  P    Y M++  L   G+L++   L+++M   G
Sbjct: 448 KTKGC-HPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 183/363 (50%), Gaps = 5/363 (1%)

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           W F   +        V  ++IL+ ++ + G   +A   FN + + G  P  ++F+ +I+ 
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 228 LCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           LC+ R   E      ++++ +  PDV  Y+ L+ G C+ G +  AE++F EM+  G++PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
             T++ +ID  CR  +I  A + + +ML +G +P+ + +N L+    K     K  ++ +
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+ +G + D ITY  LID +CK+G LE A+++   M  +G   +   F  +     + G
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V  A R   +M +   +P+  TY +++  +    +  M  KL KEM+ N  +P V TY 
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +L+   C  G   NA   +  M+    + P    Y ++L+   + G   K E+L++   +
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLG-VTPDDITYNILLEGHCKNG---KAEDLLKLRNE 563

Query: 527 RGF 529
           +G 
Sbjct: 564 KGL 566



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 198/448 (44%), Gaps = 54/448 (12%)

Query: 136 NWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN--------VEITVDT-- 185
           NW+++ P F H+   Y  M N     + F      I  + SR             +DT  
Sbjct: 89  NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148

Query: 186 -------FSILVRRYVRAGLAAEAVHAF-------------------------------- 206
                  F  L+  Y  +G  ++A+  F                                
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208

Query: 207 ---NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
              + + EYG  P    ++I+I+  C++    +A+  F+ ++ +   P  + +  L+ G 
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C++ N+ E  R+ + M+   I P+V+TYS++I  LC+ G++  A  +F EM + G  PN 
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           ITF  L+    ++ R +  +  Y+QM  +G + D + YN L++  CK G +  A K+++ 
Sbjct: 329 ITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   G  P+  T+  +     K GD+  A  +   M +     + V +  L+  F     
Sbjct: 389 MRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                +  +EM E  ++P+  TY ++I  YC  G+    +K ++EM +    KPG   Y 
Sbjct: 449 VRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM-QINGHKPGVITYN 507

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +++  L + GQ++    L+E M++ G T
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVT 535



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 152/303 (50%), Gaps = 1/303 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K R  D  +     M+   +   V T+S+L+    + G    A   F+ M+
Sbjct: 261 FNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ 320

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ I F+ +I   CR RR   A  ++   L    +PD+++Y  L+ G C+ G+++
Sbjct: 321 QRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++  EM+M G++P+  TY+ +ID  C+ G +  A ++   M E G   +++ F  L+
Sbjct: 381 KARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALI 440

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  R     +   +M   G + D  TY  +ID +CK G ++   K+L  M   G  
Sbjct: 441 SGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHK 500

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+N++   + K G +  A+ +   M +L   P+ +TYNIL++    +   + +LKL
Sbjct: 501 PGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560

Query: 450 KKE 452
           + E
Sbjct: 561 RNE 563



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 112/203 (55%), Gaps = 3/203 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ ++N   KV   + A   +D M+   ++    T++ L+  Y + G    A+  
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCR 264
              M E G   D +AF+ +IS  CR  R  +A+ +  + ++   +PD   YT ++ G+C+
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GN+    ++ +EM++ G +P V TY+++++ LC+ GQ+  A+ +   ML +G  P+ IT
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 325 FNNLMRVHVKASRTEKVLQVYNQ 347
           +N L+  H K  + E +L++ N+
Sbjct: 541 YNILLEGHCKNGKAEDLLKLRNE 563


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 184/378 (48%), Gaps = 2/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++   GK R  ++    +  M+   +   V TF+I +R   RAG   EA   F RM+
Sbjct: 230 YSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD 289

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD + ++++I  LC   +   A+  F  +K +  +PD ++Y  L+  +   G++ 
Sbjct: 290 DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD 349

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             +  + +M+  G  P+V T++I++D LC+      A   F  M + G  PN  T+N L+
Sbjct: 350 TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              ++A R E  L++ + M+ +G +    TY   ID   K G+   A++    M  KG  
Sbjct: 410 CGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIV 469

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN    N     ++++G +  A  M+  +++    P++VTYN++M+ ++     D  + L
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM  N  EP+V     LI      G  + A++    M + K L P    Y  +L  L 
Sbjct: 530 LSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK-LSPTVVTYNTLLSGLG 588

Query: 510 RAGQLQKHEELVEKMVDR 527
           + G++QK  EL E M+ +
Sbjct: 589 KEGRVQKAIELFESMIXK 606



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 153/304 (50%), Gaps = 2/304 (0%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           +++ME  G  PD + F+I++ +LC+ R   EA + FD + K    P++  Y  L+ G  R
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG I +A ++   M+  G+QP  YTY   ID   + G+  +A + F +M   G  PN + 
Sbjct: 415 AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            N  +    +  R  +   ++N ++  G   D++TYN ++ C+ K G++++A+ +L+ M+
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           R GC P+    N +   + K G V+ A +M+ +MKD+K  P  VTYN L+          
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             ++L + M   +  PN  ++  L+  +C       A K   +M    C KP    Y  V
Sbjct: 595 KAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC-KPDVLTYNTV 653

Query: 505 LQQL 508
           +  L
Sbjct: 654 IYGL 657



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 175/375 (46%), Gaps = 5/375 (1%)

Query: 155 INLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           +++ G +RQ       ++ M+     +   +++ L+   +++G   EA+  + RM   G 
Sbjct: 167 LSIRGGLRQMTTV---LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAER 273
            P    +S ++  L +KR +         ++D    P+V  +T  +R   RAG I EA  
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +FR M   G  P++ TY+++IDALC  GQ+  A ++F +M   G +P+ + +  L+    
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
                +   + ++QM+  G   D +T+  L+D  CK    ++A    + M ++G  PN  
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T+N +   + + G +  A ++   M+ +  +P   TY   +  F  S  T   ++  ++M
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKM 463

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           +   + PN+      +     MG    A K +   + E  L P S  Y M+++   + GQ
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREA-KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 514 LQKHEELVEKMVDRG 528
           + +   L+ +M+  G
Sbjct: 523 VDEAVNLLSEMIRNG 537



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 164/343 (47%), Gaps = 3/343 (0%)

Query: 167  AWHFID-LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
            A+   D   K   +  T+ +++ L+   +      +A   F  M+  GCAPD   F++++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 226  SILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            ++  +  + +E    + + +  + +PD I Y  ++    ++ N+ +A   F ++  +  +
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 285  PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
            P   TY  +ID L + G++  A  +F EM + GC+PN   FN L+  + K   TE   Q+
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 345  YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            + +M   G   D  +Y  L+DC C  G++++A+   N +   G +P+   +N I   + K
Sbjct: 951  FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 405  LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
               +  A  +Y +M++    P+  TYN LM     +   +   ++ +E++   +EP+V T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070

Query: 465  YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            Y  LI  Y    +  +AY   + M+ + C  P    Y  +  Q
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGC-NPNIGTYAQLPNQ 1112



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/533 (21%), Positives = 208/533 (39%), Gaps = 114/533 (21%)

Query: 105  HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVR 162
            + ++P +V + +   C  + G    QV    N ++        PD+   + +I+   K  
Sbjct: 501  NGLAPDSVTYNMMMKCYSKVG----QVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556

Query: 163  QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH------------------ 204
            + D AW   D MK   +  TV T++ L+    + G   +A+                   
Sbjct: 557  RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFN 616

Query: 205  -----------------AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
                              F++M    C PD + ++ VI  L ++ + + A  FF  LK  
Sbjct: 617  TLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS 676

Query: 248  FEPDVIVYTNLVRGWCRAGNISEA---------------ERVFREMKMAGI-------QP 285
              PD +    L+ G  + G I +A                R F E  M G        + 
Sbjct: 677  MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA 736

Query: 286  NVYTYSIVIDALCR--------------------------------------------CG 301
             ++   +V++ +CR                                             G
Sbjct: 737  IIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796

Query: 302  QITRAH------DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            ++   H      D+F +M  VGC P++ TFN L+ VH K+ +  ++ ++Y +M    C+ 
Sbjct: 797  ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP 856

Query: 356  DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
            D ITYN +I    K   L+ A+     +V     P   T+  +   ++K+G +  A R++
Sbjct: 857  DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916

Query: 416  GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             +M D  C+PN   +NIL+  +     T+   +L K M    + P++ +Y IL+   C  
Sbjct: 917  EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976

Query: 476  GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G  + A  Y  E+ +   L P    Y  ++  L ++ ++++   L  +M +RG
Sbjct: 977  GRVDEALYYFNEL-KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 3/228 (1%)

Query: 134  FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
            F++ V++  +F  +P  Y  +I+   KV + + A    + M     +     F+IL+  Y
Sbjct: 881  FYDLVSS--DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGY 938

Query: 194  VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
             + G    A   F RM   G  PD  +++I++  LC   R  EA  +F+ LK    +PD 
Sbjct: 939  GKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDF 998

Query: 253  IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
            I Y  ++ G  ++  + EA  ++ EM+  GI P++YTY+ ++  L   G + +A  ++ E
Sbjct: 999  IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058

Query: 313  MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +   G EP+  T+N L+R +  +   E    VY  M   GC  +  TY
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 139/297 (46%), Gaps = 2/297 (0%)

Query: 233 RASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           +  +  + F+ ++ K    D+  Y  + +     G + +   V  +M+ AG   N Y+Y+
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I  L + G    A +V+  M+  G +P+  T++ LM    K   +E V+ +  +M+ L
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G   +  T+   I    + GK+++A ++   M  +GC P+  T+ ++   +   G +  A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ KMK    +P+ V Y  L+  F      D   +   +ME +   P+V T+ IL+ +
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C    ++ A+     M ++  L P    Y  ++  L RAG+++   +L++ M   G
Sbjct: 377 LCKARDFDEAFATFDVMRKQGIL-PNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 1/172 (0%)

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           T T NF+++      K+ED   V   M +K    +  T+  IF+ +S  G +     +  
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           KM+      N  +YN L+ +   S      L++ + M    ++P++ TY  L+       
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                   ++EM E+  L+P    + + ++ L RAG++ +  E+  +M D G
Sbjct: 242 DSEMVMVLLKEM-EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG 292


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 185/385 (48%), Gaps = 7/385 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PD+  Y+ M+       Q D A  +      R VE    T   L+R     G  A A+ 
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTANALA 181

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M    C PD + ++I++   C++    +A    D ++DK   PD++ Y  +V G C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G + +A    + +   G +PN  +Y+IV+  LC   +   A ++  EM + GC PN +
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    +    E  L+V  Q+ + GC  ++++YN L+   CK  K++ A+  L+ M
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V +GC P+  ++N +   + + G+V+ A  +  ++KD  C P  ++YN ++     +  T
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              L+L  EM    ++P++ TY  +    C      +A +   + +++  ++P + +Y  
Sbjct: 422 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK-VQDMGIRPNTVLYNA 480

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L +  +     +L   M+  G
Sbjct: 481 IILGLCKRRETHSAIDLFAYMIGNG 505



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 188/374 (50%), Gaps = 3/374 (0%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L G+ R  + A   +D M  R     V T++IL+    +     +A+   + M + GC 
Sbjct: 169 GLCGRGRTAN-ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT 227

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           PD + +++V++ +C++ R  +A  F  +L     EP+ + Y  +++G C A    +AE +
Sbjct: 228 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 287

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             EM   G  PNV T++++I  LCR G +  A +V  ++ + GC PNS+++N L+    K
Sbjct: 288 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCK 347

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             + +K +   + M   GC  D ++YN L+   C+ G+++ A+++L+ +  KGC P   +
Sbjct: 348 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 407

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N +   ++K G    A  +  +M     +P+ +TY+ +          +  ++   +++
Sbjct: 408 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 467

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           +  + PN   Y  +I   C     ++A      MI   C+ P  S Y ++++ L   G +
Sbjct: 468 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM-PNESTYTILIEGLAYEGLI 526

Query: 515 QKHEELVEKMVDRG 528
           ++  +L++++  RG
Sbjct: 527 KEARDLLDELCSRG 540



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 174/349 (49%), Gaps = 7/349 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  ++    K   +  A   +D M+ +     + T++++V    + G   +A+  
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              +  YGC P+ ++++IV+  LC   R  +A+     +  K   P+V+ +  L+   CR
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 312

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  V  ++   G  PN  +Y+ ++ A C+  ++ +A      M+  GC P+ ++
Sbjct: 313 KGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 372

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    ++   +  +++ +Q+K  GC    I+YN +ID   K GK ++A+++LN MV
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P+  T++ I   + +   +  A R +GK++D+   PNTV YN ++      + T 
Sbjct: 433 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 492

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
             + L   M  N   PN +TY ILI    G+  +    K  R++++E C
Sbjct: 493 SAIDLFAYMIGNGCMPNESTYTILIE---GLA-YEGLIKEARDLLDELC 537



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 12/301 (3%)

Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           L R+    EA     S +    PD      L++    +G  +EA RV     +A   P+V
Sbjct: 77  LVRRGELDEALRLVGSAR---RPDAGTCAALIKKLSASGRTAEARRV-----LAACGPDV 128

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             Y+ ++   C  GQ+  A    AE      E ++ T + L+R      RT   L V ++
Sbjct: 129 MAYNAMMAGYCGAGQVDAARRWCAER---AVERDAYTCDTLIRGLCGRGRTANALAVLDE 185

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M R  C  D +TY  L++  CK    + A+K+L+ M  KGC P+  T+N++   I + G 
Sbjct: 186 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 245

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V+ A      +    CEPNTV+YNI+++   T++  +   +L  EM +    PNV T+ +
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI+  C  G    A + + ++ +  C  P S  Y  +L    +  ++ K    ++ MV R
Sbjct: 306 LISFLCRKGLVEPALEVLEQIPKYGC-SPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364

Query: 528 G 528
           G
Sbjct: 365 G 365



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 11/212 (5%)

Query: 123 RHGI--PLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRN 178
           R G+  P L+VL         P++  SP+   Y+ +++   K ++ D A  F+DLM SR 
Sbjct: 312 RKGLVEPALEVLEQI------PKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 365

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
               + +++ L+    R+G    AV   +++++ GCAP  I+++ VI  L +  +  EA 
Sbjct: 366 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 425

Query: 239 SFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
              + +  K  +PD+I Y+ +  G CR   I +A R F +++  GI+PN   Y+ +I  L
Sbjct: 426 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 485

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           C+  +   A D+FA M+  GC PN  T+  L+
Sbjct: 486 CKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 200/418 (47%), Gaps = 4/418 (0%)

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
           VR ++ KSC  R+   + +V  F + + ++ +F ++   +  ++   GK    DLA    
Sbjct: 133 VRILMIKSC--RNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMY 190

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
             M +  +  ++ TF+ ++    + G   EA    + +  Y   P+   ++ +I   CR 
Sbjct: 191 IKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRN 250

Query: 232 RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
                A + FD + KD  +P+ + Y+ L+ G C  G + EA  +  EM   GI+P VYTY
Sbjct: 251 HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I + +LC  G  + A ++  +M + GC PN  TF  L+    +  + E  + +Y++M  
Sbjct: 311 TIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA 370

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G    T+TYN LI+  C +G+ E A  +   M+  G  P+  T+N I +C   +GD+  
Sbjct: 371 DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  ++ KM      PN +TYN L+  +    + +  ++L + M+ N ++P+  TY  LI+
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +   G   +A      M+E   + P    Y  ++       ++     L  KMV+ G
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHG-ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 169/369 (45%), Gaps = 2/369 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      + + A   ++ M  + +E TV T++I +     AG ++EAV    +M+
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC P+   F+ +IS L R  +   A   +   L D   P  + Y  L+   C  G   
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F+ M   G  P+  TY+ +I   C  G I +A  +F +ML+ G  PN IT+N L+
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K       +++   MK  G + D  TY  LI    + GKLE A  +   M+  G +
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+  I      L  V+ A  ++ KM +    P++ TYN+++  F+ + S       
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M +  + PNV TY   I   C  G    A+K   EM E++   P    Y  ++  L 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM-EKRNYFPNLYTYSSLIYGLC 633

Query: 510 RAGQLQKHE 518
           + G+ +  E
Sbjct: 634 QEGRAEDAE 642



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 165/366 (45%), Gaps = 4/366 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  MK R     + TF+ L+    R G    A+  +++M   G  P  + ++ +I+
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385

Query: 227 ILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC + R   A + F   L     P    Y  +++ +C  G+I +A  +F +M  AG  P
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+ +I   C+ G +  A  +   M   G +P++ T+  L+    +  + E    ++
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M   G   + +TY  +ID +    K++DA+ +   MV  G  P++ T+N++    SK 
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             ++ A    GKM      PN +TY   +     +  T +  K+  EME+    PN+ TY
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625

Query: 466 RILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
             LI   C  G   +A  Y  +  +    C +P    Y  +++ L   G+  + ++LV  
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGC-EPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 524 MVDRGF 529
           M  +G 
Sbjct: 685 MQKKGL 690



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 3/321 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y E+I+   +  + + A      M    +     T++ ++  Y       +A+  F +M 
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  P    ++++IS   +    SEA++F   + K    P+VI YT+ + G CR G   
Sbjct: 545 ESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA--HDVFAEMLEVGCEPNSITFNN 327
            A ++F EM+     PN+YTYS +I  LC+ G+   A  +++ A +   GCEPN  T+  
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L++      R  +  Q+   M++ G +     Y  L+   CK+ K+E A+ +  SM   G
Sbjct: 665 LVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              + S +  +   + K   +  A  ++  M +     + V + +L+        TD+ L
Sbjct: 725 FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCL 784

Query: 448 KLKKEMEENEVEPNVNTYRIL 468
           KL   ME      N  TY +L
Sbjct: 785 KLLHVMESRNCTLNFQTYVML 805



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 13/308 (4%)

Query: 105 HSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           H ISP+ V +  +I+   G  +   +   L+ F W       + S   Y+ MI+   K  
Sbjct: 511 HGISPNHVTYTAIID---GYFNLAKVDDALALF-WKMVESGNLPSSQTYNVMISGFSKTN 566

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
               A +F   M  + +   V T++  +    R G    A   F+ ME+    P+   +S
Sbjct: 567 SISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYS 626

Query: 223 IVISILCRKRRASEAQSFFDSLKDKF-----EPDVIVYTNLVRGWCRAGNISEAERVFRE 277
            +I  LC++ RA +A+ +  +L  +      EP+V  YT LV+G C  G   EA+++   
Sbjct: 627 SLIYGLCQEGRAEDAEMY--NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+  G+QP+   Y  ++   C+  ++  A ++F  M  +G + +   +  L+    K + 
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E+   ++  M      +D + +  L+D   K+G+ +  +K+L+ M  + C  N  T+ M
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVM 804

Query: 398 IFRCISKL 405
           + R +S L
Sbjct: 805 LARELSAL 812


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 184/355 (51%), Gaps = 2/355 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M     +    TF+ L+        A+EA+   +RM   GC PD + + +V++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A +  + + + K EP V++Y  ++ G C+  ++ +A  +F+EM+  GI+P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TYS +I  LC  G+ + A  + ++M+E    P+  TF+ L+   VK  +  +  ++Y
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M +   +   +TY+ LI+  C   +L++A ++   MV K C P+  T+N + +   K 
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             V     ++ +M       NTVTYNIL+Q    +   DM  ++ KEM  + V PN+ TY
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
             L+   C  G    A   + E ++   ++P    Y ++++ + +AG+++   +L
Sbjct: 470 NTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA++ ++ M+   +E  V  ++ ++    +     +A++ 
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  ME  G  P+ + +S +IS LC   R S+A     D ++ K  PDV  ++ L+  + +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE+++ EM    I P++ TYS +I+  C   ++  A  +F  M+   C P+ +T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++   K  R E+ ++V+ +M + G   +T+TYN LI    + G  + A ++   MV
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  PN  T+N +   + K G +  A  ++  ++  K EP   TYNI+++    +   +
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+P+V  Y  +I+ +C  G    A    +EM E+  L P S  Y  +
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTL 577

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G  +   EL+++M   GF  
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAG 604



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 152/288 (52%), Gaps = 1/288 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + +K +  P +I ++ L+    +         +  +M+  GI  N YTYSI+I+  CR
Sbjct: 69  FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             Q+  A  V  +M+++G EPN +T ++L+  +  + R  + + + +QM   G + +T+T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N LI       K  +A+ +++ MV KGC P+  T+ ++   + K GD + A  +  KM+
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K EP  + YN ++      K  D  L L KEME   + PNV TY  LI+  C  G W+
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +A + + +MIE K + P    +  ++    + G+L + E+L ++MV R
Sbjct: 309 DASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 164/358 (45%), Gaps = 5/358 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  +H    L +         RP  V     Y  +I+      ++  A   +  M
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVT----YSSLISCLCNYGRWSDASRLLSDM 317

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             R +   V TFS L+  +V+ G   EA   ++ M +    P  + +S +I+  C   R 
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 235 SEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA+  F+ +  K   PDV+ Y  L++G+C+   + E   VFREM   G+  N  TY+I+
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  L + G    A ++F EM+  G  PN +T+N L+    K  + EK + V+  ++R   
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           E    TYN +I+  CK GK+ED   +  ++  KG  P+   +N +     + G    A  
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           ++ +MK+    PN+  YN L++        +   +L KEM       + +T  ++  M
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 194/426 (45%), Gaps = 9/426 (2%)

Query: 110 STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL-YHEMINLAG--KVRQFDL 166
           ST +  + +S  VR     +     F W   R  F       Y E ++  G  +++  D 
Sbjct: 9   STAKRFVHRSLVVRGNAATVSPSFSFFW---RRAFSGKTSYDYREKLSRNGLSELKLDDA 65

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
              F +++KSR     ++ FS L+    +       +    +M+  G   +   +SI+I+
Sbjct: 66  VALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR+ +   A +    + K  +EP+++  ++L+ G+C +  ISEA  +  +M + G QP
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  T++ +I  L    + + A  +   M+  GC+P+ +T+  ++    K   T+    + 
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N+M++   E   + YN +ID  CK   ++DA+ +   M  KG  PN  T++ +  C+   
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G  + A R+   M + K  P+  T++ L+  F          KL  EM +  ++P++ TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI  +C     + A +    M+ + C  P    Y  +++   +  ++++  E+  +M 
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423

Query: 526 DRGFTA 531
            RG   
Sbjct: 424 QRGLVG 429



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 1/148 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K  + + A    + ++   +E T+ T++I++    +AG   +    F  + 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD +A++ +IS  CRK    EA + F  +K D   P+   Y  L+R   R G+  
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL 297
            +  + +EM+  G   +  T  +V + L
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTNML 616


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 202/436 (46%), Gaps = 16/436 (3%)

Query: 107 ISPSTVRH--VIEKSCGVRHGIPLLQVLSFF------NWVTARPEFVHSPDLYHEMINLA 158
           I PS V    ++   C  R     LQV          NWV   P+ V    L++ +I+  
Sbjct: 312 IRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVV----LFNTLIDGL 367

Query: 159 GKVRQFDLAWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
            KV + +     ++ MK  N+      T++ L+  + +AG    A   F +M E G  P+
Sbjct: 368 CKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPN 427

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            I  + ++  LC+  R   A  FF+ +K K  + +   YT L+  +C   NI+ A + F 
Sbjct: 428 VITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFE 487

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EM  +G  P+   Y  +I  LC  G++  A  V +++   G   +   +N L+    K  
Sbjct: 488 EMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKK 547

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           + E+V ++  +M+  G + DTITYN LI    K G    A KV+  M+++G  P+  T+ 
Sbjct: 548 KLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYG 607

Query: 397 MIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
            I        +V+   +++G+M    K  PNTV YNIL+     +   D  + L ++M+ 
Sbjct: 608 AIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKV 667

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             V PN  TY  ++         + A++ +  M+EE C +P     E++ + L   G+++
Sbjct: 668 KRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEAC-RPDYITMEVLTEWLSAVGEIE 726

Query: 516 KHEELVEKMVDRGFTA 531
           K +  VE   D  + A
Sbjct: 727 KLKHFVEGYQDSSYPA 742



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 182/379 (48%), Gaps = 8/379 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++   G+ R        +  M+ R +  +V TF ILV    +A    EA+  F+R+   G
Sbjct: 287 LLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKG 346

Query: 214 CA------PDKIAFSIVISILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRA 265
            +      PD + F+ +I  LC+  +  +  S  + +K  +   P+ + Y  L+ G+ +A
Sbjct: 347 GSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKA 406

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           GN   A  +FR+M   G+QPNV T + ++D LC+ G++ RA + F EM   G + N+ T+
Sbjct: 407 GNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATY 466

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             L+      +   + +Q + +M   GC  D + Y  LI   C  G++ DA  V++ +  
Sbjct: 467 TALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKL 526

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G + + S +N++     K   +   + +  +M++   +P+T+TYN L+     +     
Sbjct: 527 AGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFAT 586

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             K+ ++M +  + P+V TY  +I  YC   + +   K   EM     + P + +Y +++
Sbjct: 587 ASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILI 646

Query: 506 QQLRRAGQLQKHEELVEKM 524
             L R   + +   L+E M
Sbjct: 647 DALCRNNDVDRAISLMEDM 665



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 176/433 (40%), Gaps = 50/433 (11%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA---AEAV 203
           SP L H ++ +  K  +   A H +D M   N   +V T  I+    VR+G +    E V
Sbjct: 173 SPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSV-TGEIVFGELVRSGRSFPDGEVV 231

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
               ++ E G  PD    + ++  LC  ++   A      +            N +  W 
Sbjct: 232 GLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWL 291

Query: 264 -RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE------V 316
            R  +I     +  EM+   I+P+V T+ I+++ LC+  +I  A  VF  +        V
Sbjct: 292 GRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWV 351

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC-EADTITYNFLIDCHCKDGKLED 375
           G EP+ + FN L+    K  + E  L +  +MK       +T+TYN LID   K G  + 
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDR 411

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A ++   M  +G  PN  T N +   + K G V+ A   + +MK    + N  TY  L+ 
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALIS 471

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA-------------- 481
            F    + +  ++  +EM  +   P+   Y  LI+  C  G  N+A              
Sbjct: 472 AFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL 531

Query: 482 ---------------------YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
                                Y+ + EM EE  +KP +  Y  ++  L + G      ++
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEM-EETGVKPDTITYNTLISYLGKTGDFATASKV 590

Query: 521 VEKMVDRGFTARP 533
           +EKM+  G   RP
Sbjct: 591 MEKMIKEGL--RP 601


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M++  V   V T++ L+R   +  +  EA+H   RM   GC PD   ++ +I 
Sbjct: 243 AVRLVDGMRAYAVPDVV-TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 301

Query: 227 ILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+     EA     D++   F PD + Y +L+ G C  G++  A  +F E +  GI+P
Sbjct: 302 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 361

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++  Y+ ++  LC  G I  A  V  EM E GC P+  T+N ++    K         V 
Sbjct: 362 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 421

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N     G   D  T+N LID +CK  KL+ A++++  M   G  P+  T+N +   + K 
Sbjct: 422 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G VN  +  + +M    C PN +TYNIL++ F  S   +   K+  +M +  + P+  ++
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH--EELVEK 523
             LI  +C  G    AY   +++ EEK     +  +  ++     +G+L  H  E++ ++
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKL-EEKGYSATADTFNTLIGAF--SGKLNMHMAEKIFDE 598

Query: 524 MVDRGFTA 531
           M+ +G  A
Sbjct: 599 MLSKGHRA 606



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 174/345 (50%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  L+      G    A+  FN  +  G  PD + ++ ++  LC +     A    + +
Sbjct: 330 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 389

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++   PD+  Y  ++ G C+ GNIS+A  V  +  M G  P+V+T++ +ID  C+  ++
Sbjct: 390 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 449

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +   M E G  P++IT+N+++    KA +  +V + + +M   GC  + ITYN L
Sbjct: 450 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 509

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C+  K+E+A KV+  M ++G +P+A +FN +     + GD+ GA+ ++ K+++   
Sbjct: 510 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 569

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
                T+N L+  F+   +  M  K+  EM       +  TYR+LI   C   + + AY 
Sbjct: 570 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 629

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ EMI +K   P  S +  V+  L    ++ +   ++  MV  G
Sbjct: 630 HLVEMI-KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 673



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 171/363 (47%), Gaps = 1/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M   +V   +  F+ ++    + G   EA     ++ + G + +   ++I I 
Sbjct: 173 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 232

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            LC   R  EA    D ++    PDV+ Y  L+RG C+     EA    R M   G  P+
Sbjct: 233 GLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 292

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
            +TY+ +ID  C+   +  A ++  + +  G  P+ +T+ +L+         E+ L+++N
Sbjct: 293 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 352

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           + +  G + D + YN L+   C  G +  A++V+N M  +GC+P+  T+N++   + K+G
Sbjct: 353 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 412

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +++ A  +          P+  T+N L+  +      D  L+L + M E  + P+  TY 
Sbjct: 413 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 472

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++   C  G  N   +  +EMI + C  P    Y ++++   R+ ++++  +++ KM  
Sbjct: 473 SVLNGLCKAGKVNEVNETFQEMILKGC-HPNPITYNILIENFCRSNKMEEASKVIVKMSQ 531

Query: 527 RGF 529
            G 
Sbjct: 532 EGL 534



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 159/323 (49%), Gaps = 1/323 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y  +IN        + A    +  +++ ++  +  ++ LV+     GL   A+
Sbjct: 324 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
              N M E GC PD   ++IVI+ LC+    S+A     D++   + PDV  +  L+ G+
Sbjct: 384 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 443

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+   +  A ++   M   GI P+  TY+ V++ LC+ G++   ++ F EM+  GC PN 
Sbjct: 444 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 503

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+N L+    ++++ E+  +V  +M + G   D +++N LI   C++G LE A  +   
Sbjct: 504 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 563

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +  KG +  A TFN +    S   +++ A +++ +M       ++ TY +L+     + +
Sbjct: 564 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 623

Query: 443 TDMVLKLKKEMEENEVEPNVNTY 465
            D       EM +    P+++T+
Sbjct: 624 VDRAYMHLVEMIKKGFIPSMSTF 646



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 67/407 (16%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKF 248
           +R Y RAG   +AV AF RM+ + C P   A++ ++  L       +A   +   L    
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119

Query: 249 EPDVIVYTNLVRGWC------------RA-------------------GNISEAERVFRE 277
            PD+  +T  +R +C            RA                   G+  +A ++F +
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 179

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG---------------CE--- 319
           M    + PN+  ++ V+ ALC+ G +  A  +  ++++ G               CE   
Sbjct: 180 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 239

Query: 320 ----------------PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                           P+ +T+N L+R   K S  ++ +    +M   GC  D  TYN +
Sbjct: 240 LPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 299

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +CK   +++A ++L   V KG  P+  T+  +   +   GDV  A  ++ + +    
Sbjct: 300 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 359

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+ V YN L++           L++  EM E    P++ TY I+I   C MG+ ++A  
Sbjct: 360 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 419

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + + I +  L P    +  ++    +  +L    +LVE+M + G  
Sbjct: 420 VMNDAIMKGYL-PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 465



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 1/222 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFF 241
           V TF+ L+  Y +      A+    RM EYG APD I ++ V++ LC+  + +E  ++F 
Sbjct: 433 VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQ 492

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           + +     P+ I Y  L+  +CR+  + EA +V  +M   G+ P+  +++ +I   CR G
Sbjct: 493 EMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG 552

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A+ +F ++ E G    + TFN L+             +++++M   G  AD+ TY 
Sbjct: 553 DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYR 612

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            LID  CK   ++ A   L  M++KG  P+ STF  +   ++
Sbjct: 613 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 654



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 128/313 (40%), Gaps = 8/313 (2%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI--VYTNLVRGWCRAGNISEAERVFRE 277
           A+  +I  L    R     +   S + +  P  I  +Y   +R + RAG + +A   F  
Sbjct: 19  AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 78

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M +    P    Y+ ++DAL       +AH V+  ML  G  P+  T    +R     +R
Sbjct: 79  MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 138

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
               L++   +   G     + Y  ++      G   DA ++ + M+     PN + FN 
Sbjct: 139 PHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 194

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + K GDV  A  + GK+       N  TYNI ++    +      ++L   M    
Sbjct: 195 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 254

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V TY  LI   C       A  Y+R M+ + CL P    Y  ++    +   +Q+ 
Sbjct: 255 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDFTYNTIIDGYCKISMVQEA 312

Query: 518 EELVEKMVDRGFT 530
            EL++  V +GF 
Sbjct: 313 TELLKDAVFKGFV 325



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 3/246 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++  + +I+   K  + D A   ++ M    +     T++ ++    +AG   E    
Sbjct: 431 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 490

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           F  M   GC P+ I ++I+I   CR  +  EA      + ++   PD + +  L+ G+CR
Sbjct: 491 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 550

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++  A  +F++++  G      T++ +I A      +  A  +F EML  G   +S T
Sbjct: 551 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 610

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+    K +  ++      +M + G      T+  +I+    + ++  A+ +++ MV
Sbjct: 611 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 670

Query: 385 RKGCNP 390
           + G  P
Sbjct: 671 KIGVVP 676


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 173/349 (49%), Gaps = 4/349 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ ++  +   G    A+     M E G  AP++  +  VIS  C+  R  EA   FD 
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575

Query: 244 L--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +  K + +P+ ++Y  L+ G+C  G +  A      M   G+   V TY++++ AL   G
Sbjct: 576 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 635

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A+++  EM   G  P+  T+N L+  H K    +K L+++  M R G  A  +TY 
Sbjct: 636 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 695

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI    K G++++  K+ +  VR+G  P+   +N +    S  G+++ A  + G+M+  
Sbjct: 696 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 755

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P+ VTYN LM+        D   KL  EM E  ++P++ TY  LI+ Y   G   +A
Sbjct: 756 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 815

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +   EM+  K   P    Y  ++Q L + GQ    E +V++MV+ G T
Sbjct: 816 LRIRNEMM-NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 863



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 2/321 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +I+   KV + D A    D M ++  V+     ++ L+  Y   G    A+   +RM
Sbjct: 553 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 612

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E G A     +++++  L    R +EA    + +  K   PDV  Y  L+ G C+ GN+
Sbjct: 613 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 672

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A  +F  M   G++  V TY+ +I AL + GQ+     +F E +  G  P+ + +N L
Sbjct: 673 KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 732

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  H  +   ++  ++  +M++     D +TYN L+   C  G++++A K+++ M  +G 
Sbjct: 733 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 792

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +    S  GDV  A R+  +M +    P  +TYN L+Q    +   D    
Sbjct: 793 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 852

Query: 449 LKKEMEENEVEPNVNTYRILI 469
           + KEM EN + P+ +TY  LI
Sbjct: 853 MVKEMVENGITPDDSTYISLI 873



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 153/311 (49%), Gaps = 1/311 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + +  F+ +  + E      +Y+ +I       + D A  + D M  R V +TV T+++L
Sbjct: 568 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 627

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           V      G   EA      M   G APD   ++I+I+  C++    +A   F+++  +  
Sbjct: 628 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 687

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
              V+ YT L+    + G + E +++F E    GI+P++  Y+ +I++    G I RA +
Sbjct: 688 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 747

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM +    P+ +T+N LMR      R ++  ++ ++M   G + D +TYN LI  + 
Sbjct: 748 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 807

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G ++DA+++ N M+ KG NP   T+N + + + K G  + A  M  +M +    P+  
Sbjct: 808 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 867

Query: 429 TYNILMQMFAT 439
           TY  L++   T
Sbjct: 868 TYISLIEGLTT 878



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 42/327 (12%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D  + +       +  ++R  C AG  + A  + R+M     +PN  TY+ VI   C 
Sbjct: 471 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCS 526

Query: 300 CGQITRAHDVFAEMLE-VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADT 357
            G++  A D+  EM E  G  PN  T+  ++    K  R ++ ++V+++M   G  + + 
Sbjct: 527 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 586

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + YN LI  +C  GKL+ A+   + MV +G     +T+N++   +   G    A+ +  +
Sbjct: 587 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 646

Query: 418 MKDLKCEPNTVTYNILMQ---------------------------------MFATSKSTD 444
           M      P+  TYNIL+                                  ++A SK   
Sbjct: 647 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 706

Query: 445 M--VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           +    KL  E     + P++  Y  LI  +   G+ + A++ + EM E+K + P    Y 
Sbjct: 707 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYN 765

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++ L   G++ +  +L+++M +RG 
Sbjct: 766 TLMRGLCLLGRVDEARKLIDEMTERGI 792



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 7/228 (3%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +FA+M  +     + TFN ++R    A +  + L++  QM R     + +TYN +I 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 366 CHCKDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKC 423
             C  G+++ A+ ++  M  R G  PN  T+  +     K+G V+ A +++ +M    + 
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P  V YN L+  +      D  L  +  M E  V   V TY +L+      G    AY+
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + EM   K L P    Y +++    + G ++K  E+ E M  RG  A
Sbjct: 643 LVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 689


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 207/412 (50%), Gaps = 13/412 (3%)

Query: 127 PLLQVLSFFNWVTARPEFVHSPDLYHE--MINLAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           P L V  F    T     V  P +Y    +I+   + R+ DLA+ F   +  + ++  V 
Sbjct: 80  PALAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 185 TFSILVRRYVRAGLAAEAVHA-FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
             S L+R    A    EAV   F+RM E GC PD I++S V+  +C   R+  A    D 
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWA---LDI 196

Query: 244 LKDKFEP------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           L+   +       +V+VY+ +V G  + G + EA  +F EM   G+ PNV TY+ VI AL
Sbjct: 197 LRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHAL 256

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C+   + +A  +  +M+  G +P+++T+N L+  +    + ++ ++++ +M   G   +T
Sbjct: 257 CKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNT 316

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           +T +  +   CK G++E+A +  +SM+ KG   N  +++ +    +  G +     ++  
Sbjct: 317 VTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNL 376

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M      PN   +NIL+  +A        + + ++M++  + P+V TY  +I  +C MG 
Sbjct: 377 MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGS 436

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++A      MI +K ++P  +VY+ ++Q     G L K EELV ++ ++G 
Sbjct: 437 MDDAMDKFNHMI-DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGL 487



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 177/368 (48%), Gaps = 8/368 (2%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F D M ++  ++ + ++S L+  Y  AG   +  + FN M   G  P++  F+I+++
Sbjct: 335 AREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              +     EA   F+ ++ +   PDV+ Y  ++  +CR G++ +A   F  M   G++P
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEP 454

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N   Y  +I   C  G + +A ++  E+   G  P  ++F +L+    K  R  +  +++
Sbjct: 455 NFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF 514

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + + R G +AD   +  LID +C  GK+ +A +V ++MV  G  P+  T+  +     K 
Sbjct: 515 DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G ++    ++ ++     +P T TY I++     +  T    ++ +EM E+ +   + TY
Sbjct: 575 GRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTY 634

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            IL+T  C     NN  +    + ++ C   +K    +  +++ ++ +A + ++ E L  
Sbjct: 635 SILLTGLC----RNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFA 690

Query: 523 KMVDRGFT 530
            + D G  
Sbjct: 691 SIPDYGLV 698



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 2/347 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V  +S +V    + G   EA   F+ M + G  P+ + ++ VI  LC+ R   +AQ    
Sbjct: 211 VVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILR 270

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  +  +PD + Y  L+ G+   G   +A R+F+EM   G+ PN  T S  +  LC+ G
Sbjct: 271 QMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHG 330

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +I  A + F  ML  G + N I+++ L+  +  A     +  ++N M R G   +   +N
Sbjct: 331 RIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFN 390

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L++ + K G + +A+ +   M ++G NP+  T+  +     ++G ++ A   +  M D 
Sbjct: 391 ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             EPN   Y  L+Q F T        +L  E+    + P + ++  LI   C  G    A
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + I +MI     K   +++  ++      G++ +   + + MV  G
Sbjct: 511 QR-IFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 168/378 (44%), Gaps = 4/378 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +I+   ++   D A    + M  + VE     +  L++ +   G   +A  
Sbjct: 418 NPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEE 477

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWC 263
               +   G  P  ++F+ +I+ LC++ R  EAQ  FD +    E  DV ++T+L+ G+C
Sbjct: 478 LVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYC 537

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G +SEA RV   M   GI+P++ TY  +++  C+ G+I     +F E+L  G +P + 
Sbjct: 538 LIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTF 597

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  ++     A RT    +++ +M   G      TY+ L+   C++   E+AI V   +
Sbjct: 598 TYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
                  +    N++   + K      A  ++  + D    P   TY I+M+      S 
Sbjct: 658 CAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSV 717

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +    +   M ++ + P  +   +++      G    A  Y+   ++ K +   +S   M
Sbjct: 718 EEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCR-VDGKSILFEASTASM 776

Query: 504 VLQQLRRAGQLQKHEELV 521
           +L      G+ ++H  L+
Sbjct: 777 LLSLFSCKGKHREHLNLL 794


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 199/391 (50%), Gaps = 10/391 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           ++L  F+ V    +F   P+   +  +IN   L G+V +   A   +D M        V 
Sbjct: 119 KLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSE---AVALVDRMVEMKYRPNVV 175

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T + L+      G   EA+   +RM +YGC  ++I +  V++ +C+    + A   F  +
Sbjct: 176 TVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKM 235

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +++  +  V+ Y+ ++   C+ GN+ +A  +F EM+M GI+ +V  YS +I  LC  G+ 
Sbjct: 236 EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRW 295

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +  EM+     PN +TF+ L+ V VK  +  +  ++YN+M   G   DTITY+ L
Sbjct: 296 DDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSL 355

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+ +L +A ++L+ MV KGC PN  T++++     K   V+   R++ ++     
Sbjct: 356 IDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             +TVTYN L+Q F  S   ++  +L +EM    V P+V TY IL+   C  G    A +
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALE 475

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              +M + + +  G  +Y +++  +  A ++
Sbjct: 476 IFEKMQKSRMI-LGIGIYNIIIHGMCNASKV 505



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 190/382 (49%), Gaps = 2/382 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K     LA      M+ R+++ +V  +SI++    + G   +A+  FN ME
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEME 271

Query: 211 EYGCAPDKIAFSIVISILCRKRRASE-AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G   D +A+S +I  LC   R  + A+   + +     P+V+ ++ L+  + + G + 
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ ++ EM   GI P+  TYS +ID  C+  ++  A+ +   M+  GCEPN +T++ L+
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA R +  ++++ ++   G  ADT+TYN L+   C+ GKL  A ++   MV +G  
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVP 451

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+ ++   +   G++  A  ++ KM+  +       YNI++     +   D    L
Sbjct: 452 PSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSL 511

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+P+V TY ++I   C  G  + A    R+M E+ C  P    Y ++++   
Sbjct: 512 FCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGC-APSDCTYNILIRAHL 570

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
               +    EL+E+M  RGF A
Sbjct: 571 GGSGVISSVELIEEMKMRGFAA 592



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 37/356 (10%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGN 267
           M+  G   +    +I+I+  CRKR+   A S    +LK  FEP+ I ++ L+ G+C  G 
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +SEA  +   M     +PNV T + +I+ LC  G++T A  +   M++ GCE N IT+  
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++    K+  T   L ++ +M+    +A  + Y+ +ID  CKDG L+DA+ + N M  KG
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 388 ---------------CN--------------------PNASTFNMIFRCISKLGDVNGAH 412
                          CN                    PN  TF+ +     K G +  A 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +Y +M      P+T+TY+ L+  F          ++   M     EPN+ TY ILI  Y
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C     +N  +   E I  K L   +  Y  ++Q   ++G+L   +EL ++MV RG
Sbjct: 395 CKAKRVDNGMRLFCE-ISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 184/382 (48%), Gaps = 7/382 (1%)

Query: 93  SLSLGFSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           +L+L   +     SI  S V++  VI+  C  + G  L   LS FN +  +         
Sbjct: 226 ALALDLFRKMEERSIKASVVQYSIVIDSLC--KDG-NLDDALSLFNEMEMKG-IKADVVA 281

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I       ++D     +  M  RN+   V TFS L+  +V+ G   EA   +N M 
Sbjct: 282 YSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV 341

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G APD I +S +I   C++ R  EA    D +  K  EP+++ Y+ L+  +C+A  + 
Sbjct: 342 ARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVD 401

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
              R+F E+   G+  +  TY+ ++   C+ G++  A ++F EM+  G  P+ +T+  L+
Sbjct: 402 NGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILL 461

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                    +K L+++ +M++         YN +I   C   K++DA  +  S+  KG  
Sbjct: 462 DGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVK 521

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N++   + K G ++ A  ++ KMK+  C P+  TYNIL++           ++L
Sbjct: 522 PDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVEL 581

Query: 450 KKEMEENEVEPNVNTYRILITM 471
            +EM+      + +T ++++ M
Sbjct: 582 IEEMKMRGFAADASTIKMVVVM 603



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 43/309 (13%)

Query: 104 AHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKV 161
             +I P+ V         V+ G  LL+    +N + AR     +PD   Y  +I+   K 
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEG-KLLEAKELYNEMVARG---IAPDTITYSSLIDGFCKE 362

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA----------------GLAAEAV-- 203
            +   A   +DLM S+  E  + T+SIL+  Y +A                GL A+ V  
Sbjct: 363 NRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTY 422

Query: 204 -----------------HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-K 245
                              F  M   G  P  + + I++  LC      +A   F+ + K
Sbjct: 423 NTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQK 482

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
            +    + +Y  ++ G C A  + +A  +F  + + G++P+V TY+++I  LC+ G ++ 
Sbjct: 483 SRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSE 542

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +F +M E GC P+  T+N L+R H+  S     +++  +MK  G  AD  T   ++ 
Sbjct: 543 ADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV- 601

Query: 366 CHCKDGKLE 374
               DG+L+
Sbjct: 602 VMLSDGRLD 610



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 37/296 (12%)

Query: 233 RASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           + +EA   F+S+ + +  P +I ++ L     R           +EM + GI+ N+YT +
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           I+I+  CR  ++  A  V    L+ G EPN                              
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPN------------------------------ 138

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
                TIT++ LI+  C +G++ +A+ +++ MV     PN  T N +   +   G V  A
Sbjct: 139 -----TITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA 193

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  +M    CE N +TY  ++     S +T + L L ++MEE  ++ +V  Y I+I  
Sbjct: 194 LVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDS 253

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            C  G+ ++A     EM E K +K     Y  ++  L   G+     +++ +M+ R
Sbjct: 254 LCKDGNLDDALSLFNEM-EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 1/230 (0%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A D+F  M++    P+ I F+ L     +    + VL    +M   G E +  T N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+C C+  KL  A  V+   ++ G  PN  TF+ +       G V+ A  +  +M ++
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           K  PN VT N L+            L L   M +   E N  TY  ++   C  G+   A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
               R+M EE+ +K     Y +V+  L + G L     L  +M  +G  A
Sbjct: 229 LDLFRKM-EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKA 277


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 184/384 (47%), Gaps = 2/384 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           P +YH ++  A +   F  A   ++ + +R   + V   ++++      G   +A+H   
Sbjct: 157 PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLR 216

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
            +  +GC PD ++++ V+  LC  +R    Q   + + +    P+++ +  L+   CR G
Sbjct: 217 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNG 276

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
                  V  +M   G  P++  Y+ +ID +C+ G +  AH++   M   G +PN + +N
Sbjct: 277 LFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYN 336

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L++    A R E+  ++  +M    C  D +T+N L+D  C++G ++  I++L  M+  
Sbjct: 337 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVH 396

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC P+  T+  +     K G ++ A  +   M    C+PNT++Y I+++   +++     
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L  +M +     N  T+  LI   C  G    A + +++M+   C  P    Y  V+ 
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVID 515

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +AG+  +  EL+  MV++G +
Sbjct: 516 GLGKAGKTDEALELLNVMVNKGMS 539



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 7/352 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K     +A   ++ M S  ++  V  ++ L++    A    E   
Sbjct: 294 TPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 353

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
               M +  C  D + F+I++   C+           +  L     PDVI YT ++ G+C
Sbjct: 354 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFC 413

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC   +   A D+ ++M++ GC  N I
Sbjct: 414 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 473

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K GK ++A+++LN M
Sbjct: 474 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG +PN   ++ I   +S+ G +N   +M+  ++D     + V YN ++        T
Sbjct: 534 VNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET 593

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           +  ++    M  +   PN +TY ILI      G    A    +EM+ E C K
Sbjct: 594 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA----QEMLTELCSK 641



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 165/351 (47%), Gaps = 2/351 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  +VR     G  A+A+   + M   GCAP    + +++   CR      A    + L
Sbjct: 124 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 183

Query: 245 KDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +     +   NLV    C  G++ +A  + R++   G +P+V +Y+ V+  LC   + 
Sbjct: 184 HARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW 243

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  EM+ + C PN +TFN L+    +    E+V +V  QM   GC  D   Y  +
Sbjct: 244 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATI 303

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+G L+ A ++LN M   G  PN   +N + + +           +  +M D  C
Sbjct: 304 IDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             + VT+NIL+  F  +   D V++L ++M  +   P+V TY  +I  +C  G  + A  
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            ++ M    C KP +  Y +VL+ L  A +    E+L+ +M+ +G    P+
Sbjct: 424 LLKSMTACGC-KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 473



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 5/309 (1%)

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           ++ +++  CR  +   A+    ++     P+   Y  +VR  C  G I++A  V  EM  
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP--VPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P    Y ++++A CR G    A  V  ++   GC  +    N ++         +K
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDK 210

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            L +   +   GCE D ++YN ++   C   +     +++  MVR  C PN  TFN +  
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + G     H +  +M +  C P+   Y  ++          +  ++   M    ++P
Sbjct: 271 YLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKP 330

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQLRRAGQLQKHEE 519
           NV  Y  L+   C    W    + + EM ++ C  P   V + +++    + G + +  E
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDC--PLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 520 LVEKMVDRG 528
           L+E+M+  G
Sbjct: 389 LLEQMLVHG 397



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 40/280 (14%)

Query: 144 FVHS--PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            VH   PD+  Y  +IN   K    D A   +  M +   +    +++I+++    A   
Sbjct: 394 LVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNL 258
            +A    ++M + GC  + I F+ +I+ LC+K    +A       L +   PD+I Y+ +
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 513

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G  +AG   EA  +   M   G+ PN   YS +  AL R G+I               
Sbjct: 514 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN-------------- 559

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
                                KV+Q+++ ++     +D + YN +I   CK G+ E AI+
Sbjct: 560 ---------------------KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
            L  MV  GC PN ST+ ++ R ++  G V  A  M  ++
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 187/384 (48%), Gaps = 2/384 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           P +YH ++  A +   F  +   ++ M ++   +     ++++      G   EAV    
Sbjct: 146 PPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLR 205

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
           ++  +GC  D ++++ V+  LC  +R  + +   D + +    P+++ +  L+   CR G
Sbjct: 206 KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG 265

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
                  V  +M   G  P++  Y+ +ID +C+ G +  A+++   M   G +PN + +N
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +++    A R ++  ++ ++M +  C  D +T+N L+D  C++G ++  I++L  M+  
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC P+  T+  +     K G ++ A  +   M    C+PNTV+Y I+++   ++      
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +L  +M +    PN  T+  LI   C  G    A + +++M+   C  P    Y  V+ 
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVID 504

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +AG+ ++  EL+  MV++G +
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGIS 528



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 4/386 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K    ++A   ++ M S  ++  V  ++ +++    A    EA  
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
             + M +  C  D + F+I++   C+           +  L     PDVI YT ++ G+C
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC  G+   A ++ ++M++ GC PN +
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K GK E+A+++LN M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG +PN   ++ I   +S+ G VN   +M+  +KD     + V YN ++        T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  +     M  N   PN +TY +LI      G    A + + E+     L+     +  
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFG 642

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           +    +  G+ QK EE +   VD  +
Sbjct: 643 ISNCTQENGK-QKCEENLTSAVDNNY 667



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 164/351 (46%), Gaps = 2/351 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF  +VR     G  A+A+   + M   GCAP    + +++   CR      +    +++
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 245 KDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K         NLV    C  G + EA  + R++   G + ++ +Y+ V+  LC   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  EM+ V C PN +TFN L+    +    E+V +V  QM   GC  D   Y  +
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+G LE A ++LN M   G  PN   +N + + +        A  +  +M    C
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             + VT+NIL+  F  +   D V++L ++M  +   P+V TY  +I  +C  G  + A  
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            ++ M    C KP +  Y +VL+ L  AG+    EEL+ +M+ +G    P+
Sbjct: 413 LLKSMSSCGC-KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 3/280 (1%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+   +  +VRG C  G I++A  V  EM   G  P    Y ++++A CR G    +  V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M   GC  ++   N ++    +    ++ + +  ++   GCEAD ++YN ++   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +  D  ++++ MVR  C PN  TFN +   + + G     H +  +M +  C P+   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  ++         ++  ++   M    ++PNV  Y  ++   C    W  A + + EM 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 490 EEKCLKPGSSV-YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ C  P   V + +++    + G + +  EL+E+M+  G
Sbjct: 349 QKDC--PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 193/424 (45%), Gaps = 39/424 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ +I+   + RQ   A   ++ M S +V     TF+ L+  +V  G    A+  
Sbjct: 194 PDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRL 253

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
             RM E GC+P  +  +++I+  C+  R  +A  +    + D FEPD + ++  V G C+
Sbjct: 254 KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQ 313

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++  A +V   M   G +P+VYTYS VI+ LC  G++  A  +  +M++ GC P++ T
Sbjct: 314 NGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTT 373

Query: 325 FNNLMRVHVKASRTEKVL-----------------------------------QVYNQMK 349
           FN L+      ++ E+ L                                   +++ +MK
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK 433

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             GC  D +TYN LID  C  GKL  A+ +L  M   GC  +  T+N I   + K   + 
Sbjct: 434 SSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIE 493

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++ +M       N +T+N L+     ++  D   +L  +M    ++PN  TY  ++
Sbjct: 494 EAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSIL 553

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           T YC  G+ + A   ++ M      +     Y  ++  L +A + Q   +L+  M  +G 
Sbjct: 554 THYCKQGNISKAADILQTMTANG-FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGM 612

Query: 530 TARP 533
              P
Sbjct: 613 KPTP 616



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 179/367 (48%), Gaps = 3/367 (0%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A   + LM     E  V T+S ++      G   EA    N+M + GC PD   F+ +
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTL 377

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I  LC + +  EA      L  K   P+V  +  L+   C+ G+   A R+F EMK +G 
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGC 437

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P+  TY+I+ID LC  G++ +A D+  EM   GC  +++T+N ++    K  R E+  +
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           V++QM   G   + IT+N LID  C   +++DA ++++ M+ +G  PN  T+N I     
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G+++ A  +   M     E + VTY  L+     ++ T   LKL + M    ++P   
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPK 617

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVE 522
            Y  +I       +  +A    REM E     P +  Y++V + L R  G +++  + + 
Sbjct: 618 AYNPVIQSLFRGNNGRDALSLFREMTEVGG-PPDAFTYKIVFRGLCRGGGPIKEAFDFLV 676

Query: 523 KMVDRGF 529
           +M D GF
Sbjct: 677 EMADNGF 683



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 187/396 (47%), Gaps = 4/396 (1%)

Query: 132 LSFFNWVTARPE-FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           L   N   AR +    S D+Y E+I   G    FDL    +  M+    E+ +      +
Sbjct: 73  LRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFI 132

Query: 191 RRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
             Y R  L  +A     N+++ +G   +   ++ ++++L    +    +S +  +  +  
Sbjct: 133 GSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGI 192

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           EPDV+ +  ++   CRA     A  +  EM    + P+  T++ +++     G I  A  
Sbjct: 193 EPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALR 252

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           + A M E+GC P S+T N L+  + K  R    L    Q    G E D +T++  ++  C
Sbjct: 253 LKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLC 312

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++G ++ A+KVL  M+++GC P+  T++ +  C+   G++  A  +  +M D  C P+T 
Sbjct: 313 QNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTT 372

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+N L+    T    +  L L +E+    + PNV T+ ILI   C +G  + A +   EM
Sbjct: 373 TFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM 432

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               C  P    Y +++  L  +G+L K  +L+++M
Sbjct: 433 KSSGC-TPDEVTYNILIDNLCSSGKLAKALDLLKEM 467


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 200/418 (47%), Gaps = 4/418 (0%)

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
           VR ++ KSC  R+   + +V  F + + ++ +F ++   +  ++   GK    DLA    
Sbjct: 133 VRILMIKSC--RNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMY 190

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
             M +  +  ++ TF+ ++    + G   EA    + +  Y   P+   ++ +I   CR 
Sbjct: 191 IKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRN 250

Query: 232 RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
                A + FD + KD  +P+ + Y+ L+ G C  G + EA  +  EM   GI+P VYTY
Sbjct: 251 HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I + +LC  G  + A ++  +M + GC PN  TF  L+    +  + E  + +Y++M  
Sbjct: 311 TIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA 370

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G    T+TYN LI+  C +G+ E A  +   M+  G  P+  T+N I +C   +GD+  
Sbjct: 371 DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  ++ KM      PN +TYN L+  +    + +  ++L + M+ N ++P+  TY  LI+
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +   G   +A      M+E   + P    Y  ++       ++     L  KMV+ G
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHG-ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 169/369 (45%), Gaps = 2/369 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      + + A   ++ M  + +E TV T++I +     AG ++EAV    +M+
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC P+   F+ +IS L R  +   A   +   L D   P  + Y  L+   C  G   
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F+ M   G  P+  TY+ +I   C  G I +A  +F +ML+ G  PN IT+N L+
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K       +++   MK  G + D  TY  LI    + GKLE A  +   M+  G +
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+  I      L  V+ A  ++ KM +    P++ TYN+++  F+ + S       
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M +  + PNV TY   I   C  G    A+K   EM E++   P    Y  ++  L 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM-EKRNYFPNLYTYSSLIYGLC 633

Query: 510 RAGQLQKHE 518
           + G+ +  E
Sbjct: 634 QEGRAEDAE 642



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 165/366 (45%), Gaps = 4/366 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  MK R     + TF+ L+    R G    A+  +++M   G  P  + ++ +I+
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385

Query: 227 ILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC + R   A + F   L     P    Y  +++ +C  G+I +A  +F +M  AG  P
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+ +I   C+ G +  A  +   M   G +P++ T+  L+    +  + E    ++
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M   G   + +TY  +ID +    K++DA+ +   MV  G  P++ T+N++    SK 
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             ++ A    GKM      PN +TY   +     +  T +  K+  EME+    PN+ TY
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625

Query: 466 RILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
             LI   C  G   +A  Y  +  +    C +P    Y  +++ L   G+  + ++LV  
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGC-EPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 524 MVDRGF 529
           M  +G 
Sbjct: 685 MQKKGL 690



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 3/321 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y E+I+   +  + + A      M    +     T++ ++  Y       +A+  F +M 
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  P    ++++IS   +    SEA++F   + K    P+VI YT+ + G CR G   
Sbjct: 545 ESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA--HDVFAEMLEVGCEPNSITFNN 327
            A ++F EM+     PN+YTYS +I  LC+ G+   A  +++ A +   GCEPN  T+  
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L++      R  +  Q+   M++ G +     Y  L+   CK+ K+E A+ +  SM   G
Sbjct: 665 LVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              + S +  +   + K   +  A  ++  M +     + V + +L+        TD+ L
Sbjct: 725 FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCL 784

Query: 448 KLKKEMEENEVEPNVNTYRIL 468
           KL   ME      N  TY +L
Sbjct: 785 KLLHVMESRNCTLNFQTYVML 805



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 13/308 (4%)

Query: 105 HSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           H ISP+ V +  +I+   G  +   +   L+ F W       + S   Y+ MI+   K  
Sbjct: 511 HGISPNHVTYTAIID---GYFNLAKVDDALALF-WKMVESGNLPSSQTYNVMISGFSKTN 566

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
               A +F   M  + +   V T++  +    R G    A   F+ ME+    P+   +S
Sbjct: 567 SISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYS 626

Query: 223 IVISILCRKRRASEAQSFFDSLKDKF-----EPDVIVYTNLVRGWCRAGNISEAERVFRE 277
            +I  LC++ RA +A+ +  +L  +      EP+V  YT LV+G C  G   EA+++   
Sbjct: 627 SLIYGLCQEGRAEDAEMY--NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+  G+QP+   Y  ++   C+  ++  A ++F  M  +G + +   +  L+    K + 
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E+   ++  M      +D + +  L+D   K+G+ +  +K+L+ M  + C  N  T+ M
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVM 804

Query: 398 IFRCISKL 405
           + R +S L
Sbjct: 805 LARELSAL 812


>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g43820-like [Glycine max]
          Length = 505

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 185/374 (49%), Gaps = 1/374 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           YH ++   G+ + FD     +  M+   ++  +   S++V  +VRAG  + A+  F  ++
Sbjct: 113 YHVIVKALGRRKFFDFMMDALCDMRRNAIDGDLFMLSVVVDSFVRAGHVSRAIQVFGNLD 172

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           + G   D  A ++++  LCR+     A S  +S+K K + DV  Y  +  GW R G +SE
Sbjct: 173 DLGVRRDTEALNVLLLCLCRRSHVGAANSVLNSMKGKVDFDVGTYNAVAGGWSRFGRVSE 232

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
            ERV REM+  G++P+  T+  +I+ L R G++  A ++   M E+ C+P++ T+N ++ 
Sbjct: 233 VERVMREMEADGLRPDCRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIF 292

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
             V     E+ ++ YN+M    CE +  TY  +I+   +  K+ DA+ + + M+R+G  P
Sbjct: 293 NFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRGVVP 352

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +  T     + +   G    A  +Y K + L C  +   Y IL+   +       +L + 
Sbjct: 353 STGTITTFIKRLCSYGPPYAALMIYKKARKLGCVISMEAYKILLMRLSMVGKCGTLLSIW 412

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           +EM+E     ++  Y  +I+  C +G   NA   + E +  K   P   VY  +  +L  
Sbjct: 413 EEMQECGYSSDLEVYECIISGLCNVGQLENAVLVMEEAL-RKGFCPSRLVYSKLSNRLLA 471

Query: 511 AGQLQKHEELVEKM 524
           + + ++  +L  K+
Sbjct: 472 SDKSERAYKLFLKI 485



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 1/258 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M++  +     TF  L+    R G   EAV     M+E  C PD   ++ VI        
Sbjct: 240 MEADGLRPDCRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGD 299

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             E   +++  L D  EP++  Y  ++  + RA  +++A  +F EM   G+ P+  T + 
Sbjct: 300 FEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGTITT 359

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
            I  LC  G    A  ++ +  ++GC  +   +  L+       +   +L ++ +M+  G
Sbjct: 360 FIKRLCSYGPPYAALMIYKKARKLGCVISMEAYKILLMRLSMVGKCGTLLSIWEEMQECG 419

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
             +D   Y  +I   C  G+LE+A+ V+   +RKG  P+   ++ +   +        A+
Sbjct: 420 YSSDLEVYECIISGLCNVGQLENAVLVMEEALRKGFCPSRLVYSKLSNRLLASDKSERAY 479

Query: 413 RMYGKMKDLKCEPNTVTY 430
           +++ K+K  +   N   Y
Sbjct: 480 KLFLKIKXARSLENAKKY 497



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 1/166 (0%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           D Y  MIN   + R+   A    D M  R V  +  T +  ++R    G    A+  + +
Sbjct: 320 DTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIYKK 379

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGN 267
             + GC     A+ I++  L    +     S ++ +++  +  D+ VY  ++ G C  G 
Sbjct: 380 ARKLGCVISMEAYKILLMRLSMVGKCGTLLSIWEEMQECGYSSDLEVYECIISGLCNVGQ 439

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           +  A  V  E    G  P+   YS + + L    +  RA+ +F ++
Sbjct: 440 LENAVLVMEEALRKGFCPSRLVYSKLSNRLLASDKSERAYKLFLKI 485


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 190/399 (47%), Gaps = 36/399 (9%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   + +M  R  +  + T++ L+  Y       EA   FNRM + G  PD + ++++I 
Sbjct: 284 AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+ +   EA   F  L +K   P +  Y +L+ G C +G IS  +++  EM  +   P
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V TY+I+IDALC+ G+I  A  V   M++ G +PN +T+N +M  +   +       ++
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N+M + G E D + YN LI+ +CK   +++AI +   M  K   P+ +++N +   +  L
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL---------------- 449
           G +     +  +M D    P+ +TYNIL+  F  ++  D  + L                
Sbjct: 524 GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNH 583

Query: 450 ----------KKEMEENEVE--------PNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
                     K +M E+ ++        PNV TY ILI   C  G +  A   + +M E+
Sbjct: 584 AIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKM-ED 642

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               P +  +E+++  L +  +  K E+L E+M+ RG  
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 8/354 (2%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R + +   T++ L+      G   E      +M      PD   F+I+I  LC++ R  E
Sbjct: 224 RGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE 283

Query: 237 AQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           AQ     +  + E PD++ Y  L+ G+C   N+ EA  +F  M   G++P+V  Y+++ID
Sbjct: 284 AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
             C+   +  A  +F E+      P   ++N+L+     + R   V ++ ++M       
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D +TYN LID  CK+G++ +A+ VL  M++KG  PN  T+N +        +VN A  ++
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +M     EP+ + YN+L+  +  ++  D  + L KEM    + P++ +Y  LI   C +
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523

Query: 476 GHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           G       +++E+++E C     P    Y ++L    +     K   L  ++V+
Sbjct: 524 GRI----PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 185/380 (48%), Gaps = 2/380 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           ++ +++    ++  +  A      ++S+ +  ++ TF+IL+  Y      A A      +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            + G  P+ + F+ +I+  C      +A  F  +L    +  D   Y  L+ G  + G I
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  + +EM+ + +QPN+  YS +ID LC+ G ++ A  + +++ E G   +++T+N+L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +       R ++V Q+  +M R   + D  T+N LID  CK+G++ +A  VL  M ++G 
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +        +V+ A  ++ +M     EP+ + YN+L+  +  +K  D  + 
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L KE+    + P + +Y  LI   C  G  ++  K + EM       P    Y +++  L
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-HGSAQPPDVVTYNILIDAL 415

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            + G++ +   ++  M+ +G
Sbjct: 416 CKEGRILEALGVLVMMMKKG 435



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 2/302 (0%)

Query: 229 CRKRRASEAQSFFDSLKDKFEPD-VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           CR R   +A + F+ +   F P    V+  L+    R G+   A  +F +++  GI P++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            T++I+I+          A  + A +L+ G +PN +TFN ++          K L     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           +   G   D  TY  LI+   K+G+++ A+ +L  M +    PN   ++ +   + K G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V+ A  +  ++ +     + VTYN L+    +      V +L  +M    V+P+  T+ I
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI   C  G    A + +  M+ ++  KP    Y  +++       + +  EL  +MV R
Sbjct: 271 LIDALCKEGRILEA-QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 528 GF 529
           G 
Sbjct: 330 GL 331



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 2/238 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ M++        ++A    + M    +E  +  +++L+  Y +  +  EA+  F  M 
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNIS 269
                PD  +++ +I  LC   R    Q   D + D  + PDVI Y  L+  +C+     
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +FR++ + GI P+ YT   ++D LC+  ++  A D    +L  GC PN  T+  L+
Sbjct: 563 KAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILI 621

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
               K     + + + ++M+      D IT+  +I    +  + + A K+   M+ +G
Sbjct: 622 NALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 2/207 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K    D A      M+ +N+   + +++ L+      G        
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
            + M + G +PD I ++I++   C+ +   +A S F  + +   PD      +V   C+ 
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKG 592

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             +  AE   + + M G  PNV TY+I+I+ALC+ G    A  + ++M +    P++ITF
Sbjct: 593 EKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITF 652

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLG 352
             ++ V ++ + T+K  ++  +M   G
Sbjct: 653 EIIIGVLLQRNETDKAEKLREEMIARG 679



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 72/158 (45%), Gaps = 1/158 (0%)

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           +C+   ++DA+   N MVR    P  S F+ +   I ++G    A  ++ +++     P+
Sbjct: 30  NCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             T+ IL+  +     T     L   + ++  +PN+ T+  +I  +C  G    A  + +
Sbjct: 90  IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            ++ +  L      Y  ++  L + GQ++    L+++M
Sbjct: 150 NLLAQGYLF-DQFTYGTLINGLSKNGQIKAALHLLQEM 186


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 187/384 (48%), Gaps = 2/384 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           P +YH ++  A +   F  +   ++ M ++   +     ++++      G   EAV    
Sbjct: 146 PPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLR 205

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
           ++  +GC  D ++++ V+  LC  +R  + +   D + +    P+++ +  L+   CR G
Sbjct: 206 KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG 265

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
                  V  +M   G  P++  Y+ +ID +C+ G +  A+++   M   G +PN + +N
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +++    A R ++  ++ ++M +  C  D +T+N L+D  C++G ++  I++L  M+  
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC P+  T+  +     K G ++ A  +   M    C+PNTV+Y I+++   ++      
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +L  +M +    PN  T+  LI   C  G    A + +++M+   C  P    Y  V+ 
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVID 504

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +AG+ ++  EL+  MV++G +
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGIS 528



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 4/386 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K    ++A   ++ M S  ++  V  ++ +++    A    EA  
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
             + M +  C  D + F+I++   C+           +  L     PDVI YT ++ G+C
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC  G+   A ++ ++M++ GC PN +
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K GK E+A+++LN M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG +PN   ++ I   +S+ G VN   +M+  +KD     + V YN ++        T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  +     M  N   PN +TY +LI      G    A + + E+     L+     +  
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFG 642

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           +    +  G+ QK EE +   VD  +
Sbjct: 643 ISNCTQENGK-QKCEENLTSAVDNNY 667



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 164/351 (46%), Gaps = 2/351 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF  +VR     G  A+A+   + M   GCAP    + +++   CR      +    +++
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 245 KDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K         NLV    C  G + EA  + R++   G + ++ +Y+ V+  LC   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  EM+ V C PN +TFN L+    +    E+V +V  QM   GC  D   Y  +
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+G LE A ++LN M   G  PN   +N + + +        A  +  +M    C
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             + VT+NIL+  F  +   D V++L ++M  +   P+V TY  +I  +C  G  + A  
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            ++ M    C KP +  Y +VL+ L  AG+    EEL+ +M+ +G    P+
Sbjct: 413 LLKSMSSCGC-KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 3/280 (1%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+   +  +VRG C  G I++A  V  EM   G  P    Y ++++A CR G    +  V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M   GC  ++   N ++    +    ++ + +  ++   GCEAD ++YN ++   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +  D  ++++ MVR  C PN  TFN +   + + G     H +  +M +  C P+   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  ++         ++  ++   M    ++PNV  Y  ++   C    W  A + + EM 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 490 EEKCLKPGSSV-YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ C  P   V + +++    + G + +  EL+E+M+  G
Sbjct: 349 QKDC--PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 181/363 (49%), Gaps = 2/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F D M S  V   V T++ILVR     G   EA+     M   GC P+ + ++ +++
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 233

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              R      A+     +++   +P+++ + ++V G C+AG + +A +VF EM   G+ P
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAP 293

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  +Y+ ++   C+ G    A  VFAEM + G  P+ +TF +L+ V  KA   E+ + + 
Sbjct: 294 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLV 353

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            QM+  G + + +T+  LID  CK G L+DA+  +  M +    P+   +N +      +
Sbjct: 354 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMV 413

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G ++ A  +  +M+    +P+ VTY+ ++  +  +  T    +L ++M E  V P+  TY
Sbjct: 414 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 473

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI + CG    ++A+   + MI+   L+P    Y  ++    + G ++    L +KMV
Sbjct: 474 SSLIRVLCGEKRLSDAHVLFKNMIKLG-LQPDEFTYTSLIDGHCKEGNVESALSLHDKMV 532

Query: 526 DRG 528
             G
Sbjct: 533 KAG 535



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 162/317 (51%), Gaps = 3/317 (0%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEA 271
           G  P  +A++ V+  L      S A+ FFDS L D   P+V  Y  LVR  C  G+  EA
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             + R+M+ AG  PNV TY+ ++ A  R G++  A  +   M E G +PN +TFN+++  
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             KA + E   +V+++M R G   D ++YN L+  +CK G   +A+ V   M +KG  P+
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             TF  +   + K G++  A  +  +M++   + N VT+  L+  F      D  L   +
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M++  ++P+V  Y  LI  YC +G  + A + + EM E K LKP    Y  ++    + 
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM-EAKGLKPDVVTYSTIISAYCKN 448

Query: 512 GQLQKHEELVEKMVDRG 528
                  EL ++M+++G
Sbjct: 449 CDTHSAFELNQQMLEKG 465



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 175/352 (49%), Gaps = 2/352 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+       V T++ LV  + RAG    A      M E G  P+ + F+ +++ +C+  +
Sbjct: 216 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK 275

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+  FD + ++   PD + Y  LV G+C+AG   EA  VF EM   GI P+V T++ 
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I  +C+ G + RA  +  +M E G + N +TF  L+    K    +  L     MK+  
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            +   + YN LI+ +C  G++++A ++L+ M  KG  P+  T++ I     K  D + A 
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 455

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +  +M +    P+ +TY+ L+++    K       L K M +  ++P+  TY  LI  +
Sbjct: 456 ELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 515

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           C  G+  +A     +M++   L P    Y +++  L ++ +  + ++L+ K+
Sbjct: 516 CKEGNVESALSLHDKMVKAGVL-PDVVTYSVLINGLSKSARAMEAQQLLFKL 566



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 202/431 (46%), Gaps = 21/431 (4%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           ++   CG  H    L +L         P  V     Y+ ++    +  + D A   + +M
Sbjct: 196 LVRALCGRGHRKEALSILRDMRGAGCGPNVV----TYNTLVAAFFRAGEVDGAERLVGMM 251

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           +   ++  + TF+ +V    +AG   +A   F+ M   G APD ++++ ++   C+   +
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCS 311

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA S F  +  K   PDV+ +T+L+   C+AGN+  A  + R+M+  G+Q N  T++ +
Sbjct: 312 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTAL 371

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID  C+ G +  A      M +   +P+ + +N L+  +    R ++  ++ ++M+  G 
Sbjct: 372 IDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 431

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           + D +TY+ +I  +CK+     A ++   M+ KG  P+A T++ + R +     ++ AH 
Sbjct: 432 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHV 491

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  M  L  +P+  TY  L+       + +  L L  +M +  V P+V TY +LI    
Sbjct: 492 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLS 551

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA---------------GQLQKHE 518
                  A + + ++  E  + P ++ Y+ ++   R+A               G + + +
Sbjct: 552 KSARAMEAQQLLFKLYHEDPI-PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 610

Query: 519 ELVEKMVDRGF 529
           ++ + M+DR +
Sbjct: 611 KVYQSMLDRNW 621



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 198/427 (46%), Gaps = 52/427 (12%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ M+N   K  + + A    D M    +     +++ LV  Y +AG + EA+  F  M 
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322

Query: 211 EYGCAPDKIAFSIVISILC---------------RKRRASEAQSFFDSLKDKF------- 248
           + G  PD + F+ +I ++C               R+R     +  F +L D F       
Sbjct: 323 QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 382

Query: 249 --------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                         +P V+ Y  L+ G+C  G + EA  +  EM+  G++P+V TYS +I
Sbjct: 383 DALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 442

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
            A C+      A ++  +MLE G  P++IT+++L+RV     R      ++  M +LG +
Sbjct: 443 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQ 502

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D  TY  LID HCK+G +E A+ + + MV+ G  P+  T++++   +SK      A ++
Sbjct: 503 PDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562

Query: 415 YGKMKDLKCEPNTVTYNILMQMF--ATSKSTDMVLK---LKKEMEENE------VEPNVN 463
             K+      P    Y+ LM     A  KS   +LK   +K  M E +      ++ N N
Sbjct: 563 LFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 622

Query: 464 ----TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
                Y +LI  +C  G+   A  + ++M++     P S+    +++ L   G + + ++
Sbjct: 623 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGG-FAPNSTSTISLIRGLFENGMVVEADQ 681

Query: 520 LVEKMVD 526
           +++++++
Sbjct: 682 VIQQLLN 688



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 153/328 (46%), Gaps = 18/328 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN    V + D A   +  M+++ ++  V T+S ++  Y +      A     +M 
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD I +S +I +LC ++R S+A   F ++ K   +PD   YT+L+ G C+ GN+ 
Sbjct: 463 EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 522

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +  +M  AG+ P+V TYS++I+ L +  +   A  +  ++      P +  ++ LM
Sbjct: 523 SALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582

Query: 330 RVHVKASRTEKVLQVYNQ--MKRLGCEADTI--------------TYNFLIDCHCKDGKL 373
               KA   + VL +     MK L  EAD +               Y+ LI  HC+ G +
Sbjct: 583 HCCRKA-ELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNV 641

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A+     M++ G  PN+++   + R + + G V  A ++  ++ +     +      L
Sbjct: 642 MKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKAL 701

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + +     + D VL +   M ++ + P+
Sbjct: 702 IDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 182/356 (51%), Gaps = 2/356 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK R     V ++S ++  Y   G   + +     M+  G  P+   ++ +I +LC+  +
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 234 ASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+    + +     PD +VYT L+ G+C+ GNI  A ++F EM+   I P+   Y+ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VI  LCRCG++  A  VF +M   G EP+ +T+  L+  + K+   EK   ++NQM + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + +TY  L D  CK G+++ A ++L+ M  KG   N  T+N +   + K G++  A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           ++  +M+     P+T+T+  LM  +  +       +L +EM +  ++P V T+ +L+  +
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  G   +  + +  M+ EK + P ++ Y  +++Q      ++   E+ + M  RG
Sbjct: 301 CMSGMLEDGERLLAWML-EKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 195/387 (50%), Gaps = 4/387 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+LY  + +I L  K  + D A   +  M ++ +      ++ L+  + + G    A   
Sbjct: 43  PNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKL 102

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F+ ME+    PD IA++ VI  LCR  +  EA   F+ +  +  EPD + YT L+ G+C+
Sbjct: 103 FDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCK 162

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + +A  +  +M  +G+ PNV TY+ + D LC+ GQ+  A+++  EM   G + N  T
Sbjct: 163 SGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICT 222

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N+L+    K+    + +++  +M+  G   DTIT+  L+D +CK G++  A ++L  M+
Sbjct: 223 YNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML 282

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  P   TFN++       G +    R+   M +    PNT TYN LM+ +    +  
Sbjct: 283 DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMR 342

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              ++ K M    V P+ NTY ILI  +C   +   A+   +EM  EK     +S Y  +
Sbjct: 343 CTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM-AEKGFNLTASSYNSI 401

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   +  ++ +  EL E+M   G  A
Sbjct: 402 IKGFFKKKKISEARELFEEMRREGMAA 428



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 194/392 (49%), Gaps = 16/392 (4%)

Query: 147 SPDL--YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           +PD+  Y  +IN   L G++++       I  M+ + ++  + T++ ++    ++G   +
Sbjct: 7   APDVVSYSTVINGYCLGGELQK---VLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
           A      M   G  PD + ++ +I   C+      A   FD + K +  PD I YT ++ 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G CR G + EA++VF +M   G++P+  TY+ +ID  C+ G++ +A  +  +M++ G  P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N +T+  L     K  + +   ++ ++M   G + +  TYN L++  CK G +  A+K++
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M   G  P+  TF  +     K G++  AH +  +M D   +P  +T+N+LM  F  S
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK---PG 497
              +   +L   M E  + PN  TY  L+  YC      N  +   E+ +  C +   P 
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYC----IRNNMRCTTEIYKGMCARGVMPD 359

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           S+ Y ++++   +A  +++   L ++M ++GF
Sbjct: 360 SNTYNILIKGHCKARNMKEAWFLHKEMAEKGF 391



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 179/388 (46%), Gaps = 4/388 (1%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y  +I+   K+     A+   D M+ + +      ++ ++    R G   EA   
Sbjct: 78  PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKV 137

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           FN+M   G  PD++ ++ +I   C+     +A S  + + +    P+V+ YT L  G C+
Sbjct: 138 FNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCK 197

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  +  EM   G+Q N+ TY+ +++ LC+ G I +A  +  EM   G  P++IT
Sbjct: 198 LGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTIT 257

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           F  LM  + K     K  ++  +M   G +   IT+N L++  C  G LED  ++L  M+
Sbjct: 258 FTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWML 317

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  PN +T+N + +      ++     +Y  M      P++ TYNIL++    +++  
Sbjct: 318 EKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMK 377

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L KEM E       ++Y  +I  +      + A +   EM  E  +   + +Y + 
Sbjct: 378 EAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG-MAADAEIYNLF 436

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           +      G ++   EL ++ ++  F  R
Sbjct: 437 VDISYGEGNMETALELCDEAIENCFLNR 464


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 179/383 (46%), Gaps = 2/383 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S   Y  +I     +   D A   +D M ++     V T++IL+ R  R G   EA   F
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 358

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRA 265
            +M ++G  P  I F+ +I+  C++     A      + K   +P++  Y  L+ G CR 
Sbjct: 359 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
               +A  + R +   G+ P+  TY+I++D  C+ GQ+  A ++F  M   G EP+  TF
Sbjct: 419 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 478

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             L+    K  R E+   +   M + G   D +T+  LID HCK GK +D   +  +MV 
Sbjct: 479 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 538

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
             C   A TFN     + K   +N A+ M GKM      P+ VT+ IL++    +  T +
Sbjct: 539 NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETAL 598

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            LK+ + M++    PNV TY I+I   C  G    A   +  M     + P    Y +++
Sbjct: 599 SLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM-SSFGVSPNHFTYAVLV 657

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
           +   +AG+L +  ++V  MV  G
Sbjct: 658 KAHVKAGRLDRAFQIVSTMVKNG 680



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 27/452 (5%)

Query: 103 TAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           T  S++     H+  K  G++     L V  FF WV  +  + +  D   +++ +     
Sbjct: 59  TLKSLASHMTPHLAGKIIGLQSNNVELGV-RFFKWVCRQSSYCYDLDGRIQLLGVLVSRD 117

Query: 163 QFDLAWHFI---------------------DLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
            F +A   +                     D M      ++   +S L+    +  +   
Sbjct: 118 LFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFV 177

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVR 260
           A   + RM   G     I +  V++ LC+      A+ F    L+  F  D  V T+LV 
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 261 GWCRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             CR  ++ EA RVF +M K    +PN  TYSI+I  LC  G++  A  +  EM+E GC+
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P++ T+  L++       T+K +++ ++M    C  +  TY  LID  C++GK+E+A  V
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA- 438
              M++ G  P   TFN +     K G V  A ++   M+   C+PN  TYN LM+    
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
            SKS    L L++ ++ N + P+  TY IL+  +C  G  N A+     M     L+P  
Sbjct: 418 VSKSYKAFLLLRRVVD-NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM-NSAGLEPDG 475

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +  ++  L + G+L++   ++  MV +G +
Sbjct: 476 FTFTALIDGLCKLGRLEQANGILGSMVKKGIS 507



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 172/401 (42%), Gaps = 57/401 (14%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+  Y + G    A    + ME+  C P+   ++ ++  LCR  ++ +A      +
Sbjct: 372 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 431

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            D    PD + Y  LV G+C+ G ++ A  +F  M  AG++P+ +T++ +ID LC+ G++
Sbjct: 432 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 491

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY------------------ 345
            +A+ +   M++ G   + +TF  L+  H K  + + V  ++                  
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 551

Query: 346 -----------------NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                             +M + G     +T+  LI+ HC+ G+   ++K+L  M + GC
Sbjct: 552 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 611

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +PN  T+ +I   +   G V  A  +   M      PN  TY +L++    +   D   +
Sbjct: 612 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 671

Query: 449 LKKEMEENEVEPNVNTYRILITMYC--------------------GMGHWNNAYKYIREM 488
           +   M +N  +PN + Y  L++ +                      +    N    +   
Sbjct: 672 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNE 731

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           I +KC  P   +Y  ++  L + G++ + ++L + MV  G 
Sbjct: 732 I-KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL 771



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/380 (18%), Positives = 152/380 (40%), Gaps = 78/380 (20%)

Query: 78  SSNSNPSLNPD-FTIPSLSLGF--------------SQISTAHSISPSTVRHVIEKSCGV 122
           +S ++  L PD FT  +L  G               S +    S+   T   +I+  C +
Sbjct: 464 NSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 523

Query: 123 RHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT 182
                +     F N V  R   + +   ++  ++  GK  + + A   +  M    +  +
Sbjct: 524 GKAKDV--CFLFENMVENRC--LTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 579

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T +IL+  + RAG  A ++    RM++ GC+P+   ++I+I+ LC   R  EA++   
Sbjct: 580 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 639

Query: 243 SL------------------------------------KDKFEPDVIVYTNLVRGWC--- 263
           S+                                    K+  +P+  +Y+ L+ G+    
Sbjct: 640 SMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 699

Query: 264 --------------RAGNISEAER----VFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
                          A ++S  E     +  E+K  G+ P    Y+ ++  LC+ G+I  
Sbjct: 700 TAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PTEDLYNFLVVGLCKEGRIIE 758

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +  +M++ G  P+    ++++  + K  + +  L+    +          +Y ++I 
Sbjct: 759 ADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIH 817

Query: 366 CHCKDGKLEDAIKVLNSMVR 385
               +G++++A K+++ +VR
Sbjct: 818 GLRNEGRVQEAQKLVSDLVR 837


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 190/385 (49%), Gaps = 8/385 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K  + D A   ++ M  +    T+ T+++++    +AG   EA   F  M 
Sbjct: 80  YTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 139

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-----PDVIVYTNLVRGWCRA 265
             GC PD   ++ +I  LC+  +  EA + +     +       PDV+ YT+L+ G C+A
Sbjct: 140 GNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKA 199

Query: 266 GNISEAERVFREMKMA-GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           G I EA +VF +  +  G  P+  TY+ +ID LC+ G++    + F EM   G EP+++T
Sbjct: 200 GRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 259

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+   +KA    K  +VY QM + G    T+TYN ++D  CK G++ +A     +M 
Sbjct: 260 YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 319

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +GC     T++ +       G+V+ A  ++ +M D  CEPN V+YNI+++    +    
Sbjct: 320 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLA 379

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCG-MGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
                 +++ +  + P+V T+   +   C  +   ++  +    M+ +    P    Y +
Sbjct: 380 KAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG-TSPNLHSYSI 438

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  + RAG L+   E+  +MV RG
Sbjct: 439 LMDGICRAGGLEVALEIFREMVSRG 463



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 195/394 (49%), Gaps = 12/394 (3%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P++V     Y+  I+   K  + D A+  +  M  +    T  T++ LV   ++AG   E
Sbjct: 40  PDYVT----YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 95

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVR 260
           A+    +M E G +P    +++VI  L +  R  EA+  F D L +   PD  VYT L++
Sbjct: 96  AMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIK 155

Query: 261 GWCRAGNISEAERVFREMKM----AGIQPNVYTYSIVIDALCRCGQITRAHDVF-AEMLE 315
           G C++G   EA  +++E       A   P+V TY+ +ID LC+ G+I  A  VF  E +E
Sbjct: 156 GLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVE 215

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G  P+++T+ +++    K  R E+  + +++M+  G E D +TY  LID   K   +  
Sbjct: 216 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 275

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A +V   M++ G   +  T+N+I   + K G V  A+  +  M++  C    VTY+ LM 
Sbjct: 276 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 335

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            F +  +    ++L + M +   EPN+ +Y I+I   C  G    AY Y  ++++ + L 
Sbjct: 336 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR-LC 394

Query: 496 PGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRG 528
           P    +   L  L +R   +    EL E MV +G
Sbjct: 395 PDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 163/350 (46%), Gaps = 7/350 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            F++++    R     EA     R    GC PD + +++ I  LC+  R  +A      +
Sbjct: 9   AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 68

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            + K  P  + YT LV G  +AG + EA  V  +M   G  P + TY++VID L + G++
Sbjct: 69  DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRV 128

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA----DTIT 359
             A  +F +ML  GC P++  +  L++   K+ + E+   +Y +       A    D +T
Sbjct: 129 EEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT 188

Query: 360 YNFLIDCHCKDGKLEDAIKVLNS-MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           Y  LID  CK G++ +A +V +   V +G  P+A T+  I   + KLG V      + +M
Sbjct: 189 YTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 248

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           ++   EP+ VTY  L+  F  +K      ++ ++M ++    +  TY I++   C  G  
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             AY     M E  C+      Y  ++      G +    EL  +M+DRG
Sbjct: 309 AEAYATFLAMEERGCVAT-VVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 127/235 (54%), Gaps = 6/235 (2%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG+V +   A+     M+ R    TV T+S L+  +   G  + AV  F RM + GC P+
Sbjct: 305 AGRVAE---AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361

Query: 218 KIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC-RAGNISEAERVF 275
            ++++I+I  LCR  + ++A  +F+  L+ +  PDV  +   + G C R   +S+   +F
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELF 421

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M   G  PN+++YSI++D +CR G +  A ++F EM+  G  P+ + FN L+R    A
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIA 481

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            R ++ L+V+ +++R     D  +Y  L+D   +  ++E+A  +   M  +GC P
Sbjct: 482 GRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 4/249 (1%)

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P++  +++VI+ LCR  ++  A  V    +  GCEP+ +T+N  +    KA R +   Q+
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +M    C   T+TY  L+D   K G+L++A+ VL  MV KG +P   T+ ++   +SK
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE----VEP 460
            G V  A R++  M    C P+   Y  L++    S   +    L KE    +      P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +V TY  LI   C  G    A +   +   E+   P +  Y  ++  L + G++++  E 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 521 VEKMVDRGF 529
             +M +RG+
Sbjct: 245 FHEMRNRGY 253



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 12/287 (4%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD++ +T ++ G CR   + EA  V      AG +P+  TY++ ID LC+  ++  A  +
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +M E  C P ++T+  L+   +KA R ++ + V  QM   G      TY  +ID   K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK----CEP 425
            G++E+A ++   M+  GC P+A  +  + + + K G    A+ +Y +    K      P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE----PNVNTYRILITMYCGMGHWNNA 481
           + VTY  L+     +     +L+ ++  ++  VE    P+  TY  +I   C +G     
Sbjct: 185 DVVTYTSLIDGLCKAGR---ILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +   EM   +  +P +  Y  ++    +A  + K   +  +M+  G
Sbjct: 242 CERFHEM-RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 287



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 3/148 (2%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDL---MKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           PD+Y     L G  ++ D     ++L   M S+     + ++SIL+    RAG    A+ 
Sbjct: 395 PDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALE 454

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
            F  M   G APD + F+ +I  LC   R  EA   F  L+ +  PD   Y +L+ G  R
Sbjct: 455 IFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDGLSR 514

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSI 292
              + EA  +   MK+ G  P  Y  ++
Sbjct: 515 CERMEEARLLSFHMKLQGCAPRHYDLTV 542



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
           + C P+ V + +++      K  D    + +       EP+  TY + I   C     ++
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A++ +++M E+KCL P +  Y  ++  L +AG+L +   ++E+MV++G
Sbjct: 61  AFQLLKKMDEKKCL-PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKG 107


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 189/385 (49%), Gaps = 10/385 (2%)

Query: 146 HSPD--LYHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           H PD   +  +I    + GK+ +   A H  D M     +  V T+  L+    + G  +
Sbjct: 131 HQPDPTTFTTLIRGLCVEGKIGE---ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 187

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
            A+     ME+  C PD + ++ +I  LC+ R+ +EA + F  +  +   PD+  YT+LV
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
              C          +  +M  + I P+V  +S V+DALC+ G++T AH++   M++ G E
Sbjct: 248 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +T+  LM  H   S  ++ ++V++ M R G   D I+Y  LI+ +CK  K++ A+ +
Sbjct: 308 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 367

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              M RK   P+  T+N +   +  +G +  A  ++ +M      P+ VTY+IL+     
Sbjct: 368 FEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 427

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           ++  +  + L K +E + + P++  Y I+I   C  G    A + +   +  K L P   
Sbjct: 428 NRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE-LEAARDLFSNLSSKGLHPSVW 486

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
            Y +++  L + G L +  +L  +M
Sbjct: 487 TYNIMIHGLCKRGLLNEANKLFMEM 511



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 189/415 (45%), Gaps = 37/415 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           + +++    K++ +         M S  V   V T +IL+  +        A     ++ 
Sbjct: 68  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 127

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   F+ +I  LC + +  EA   FD + D+ F+P+V+ Y  L+ G C+ GN S
Sbjct: 128 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 187

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+ R M+    QP+V  Y+ +ID+LC+  Q+T A ++F++M+  G  P+  T+ +L+
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247

Query: 330 RV--------HV---------------------------KASRTEKVLQVYNQMKRLGCE 354
                     HV                           K  +  +  ++ + M + G E
Sbjct: 248 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D +TY  L+D HC   ++++A+KV + MVRKG  P+  ++  +     K+  ++ A  +
Sbjct: 308 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 367

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M   +  P+T TYN LM            + L  EM      P++ TY IL+   C 
Sbjct: 368 FEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 427

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             H   A   ++  IE   L P   VY +++  + RAG+L+   +L   +  +G 
Sbjct: 428 NRHLEEAMALLKA-IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 481



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 162/345 (46%), Gaps = 3/345 (0%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y  +I+   K RQ   A++    M  + +   + T++ LV               
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 262

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N+M      PD + FS V+  LC++ + +EA    D +  +  EPDV+ YT L+ G C 
Sbjct: 263 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 322

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              + EA +VF  M   G  P+V +Y+ +I+  C+  +I +A  +F EM      P++ T
Sbjct: 323 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 382

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N LM       R +  + ++++M   G   D +TY+ L+D  CK+  LE+A+ +L ++ 
Sbjct: 383 YNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIE 442

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
               NP+   +N+I   + + G++  A  ++  +      P+  TYNI++         +
Sbjct: 443 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 502

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
              KL  EM+ N+  P+  TY  +   +        A + + EM+
Sbjct: 503 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEML 547



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 3/214 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +IN   K+ + D A +  + M  +       T++ L+      G   +A+ 
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
            F+ M   G  PD + +SI++  LC+ R   EA +   +++     PD+ VY  ++ G C
Sbjct: 402 LFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 461

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RAG +  A  +F  +   G+ P+V+TY+I+I  LC+ G +  A+ +F EM    C P+  
Sbjct: 462 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 521

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           T+N + R  ++ + T + +Q+  +M   G  AD+
Sbjct: 522 TYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 132/281 (46%), Gaps = 1/281 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P ++ +  L+    +  + S    +  +M   G+ PNVYT +I+I++ C   ++  A  V
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L++G +P+  TF  L+R      +  + L ++++M   G + + +TY  LI+  CK
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G    AI++L SM +  C P+   +  I   + K   V  A  ++ +M      P+  T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L+           V  L  +M  +++ P+V  +  ++   C  G    A++ +  MI
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            ++ ++P    Y  ++       ++ +  ++ + MV +GF 
Sbjct: 303 -QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 36/254 (14%)

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  +L +   P+ + F  L+    K      VL +  QM   G   +  T N LI+  C 
Sbjct: 53  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 112

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             ++  A  VL  +++ G  P+ +TF  + R +   G +  A  ++ KM D   +PN VT
Sbjct: 113 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 172

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENE-------------------------------- 457
           Y  L+       +T   ++L + ME+                                  
Sbjct: 173 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 232

Query: 458 ---VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              + P++ TY  L+   C +  W +    + +M+  K L P   ++  V+  L + G++
Sbjct: 233 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL-PDVVIFSTVVDALCKEGKV 291

Query: 515 QKHEELVEKMVDRG 528
            +  E+V+ M+ RG
Sbjct: 292 TEAHEIVDMMIQRG 305


>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 20/335 (5%)

Query: 124 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 183
           HG   LQ   FF  +   P + H    +   I++AG++R +   W  +D M++R +    
Sbjct: 80  HGPKALQ---FFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNP 136

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
            TF+I+  RYV AG    A+  F  M E+GC  D  +F+ ++ +LC+ +R   A +    
Sbjct: 137 KTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKL-- 194

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                         + RG+ RAG + EA   F +MK    + +V TY+ V+      G++
Sbjct: 195 ------------FKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEV 242

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  VF EM+  G  P+  T+N  ++V  K    E  + V+ +M R G   ++ TYN +
Sbjct: 243 RKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVV 302

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C  G++E A++ +  M    C PN   +N++ R      ++     ++ KM D  C
Sbjct: 303 IRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADC 362

Query: 424 EPNTVTYNILMQMFATSKSTDMVL---KLKKEMEE 455
            PN  TYNIL+      K +D +L   KL  EM E
Sbjct: 363 LPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVE 397



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 24/309 (7%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           +F   I I  R R      +  D ++ +   P+   +  +   +  AG    A ++F  M
Sbjct: 103 SFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSM 162

Query: 279 KMAGIQPNVYTYSIVIDALC--------------------RCGQITRAHDVFAEMLEVGC 318
              G   ++ +++ ++D LC                    R GQ+  A + F +M +  C
Sbjct: 163 HEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKC 222

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           E + +T+  ++     A    K  +V+N+M   G      TYN  I   CK   +E+AI 
Sbjct: 223 EIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAIS 282

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           V   M+RKG  PN++T+N++ R +  +G +  A     +MKD +CEPN   YN++++ F 
Sbjct: 283 VFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFC 342

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILIT-MYC--GMGHWNNAYKYIREMIEEKCLK 495
            ++  +  L + ++M + +  PN++TY ILI+ M+      +   A K + EM+E    K
Sbjct: 343 DAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFCK 402

Query: 496 PGSSVYEMV 504
             S + E +
Sbjct: 403 RNSEIAEQM 411


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 173/349 (49%), Gaps = 4/349 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ ++  +   G    A+     M E G  AP++  +  VIS  C+  R  EA   FD 
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580

Query: 244 L--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +  K + +P+ ++Y  L+ G+C  G +  A      M   G+   V TY++++ AL   G
Sbjct: 581 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 640

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A+++  EM   G  P+  T+N L+  H K    +K L+++  M R G  A  +TY 
Sbjct: 641 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 700

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI    K G++++  K+ +  VR+G  P+   +N +    S  G+++ A  + G+M+  
Sbjct: 701 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 760

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P+ VTYN LM+        D   KL  EM E  ++P++ TY  LI+ Y   G   +A
Sbjct: 761 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 820

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +   EM+  K   P    Y  ++Q L + GQ    E +V++MV+ G T
Sbjct: 821 LRIRNEMM-NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 868



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 2/321 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +I+   KV + D A    D M ++  V+     ++ L+  Y   G    A+   +RM
Sbjct: 558 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 617

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E G A     +++++  L    R +EA    + +  K   PDV  Y  L+ G C+ GN+
Sbjct: 618 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 677

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A  +F  M   G++  V TY+ +I AL + GQ+     +F E +  G  P+ + +N L
Sbjct: 678 KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 737

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  H  +   ++  ++  +M++     D +TYN L+   C  G++++A K+++ M  +G 
Sbjct: 738 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 797

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +    S  GDV  A R+  +M +    P  +TYN L+Q    +   D    
Sbjct: 798 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 857

Query: 449 LKKEMEENEVEPNVNTYRILI 469
           + KEM EN + P+ +TY  LI
Sbjct: 858 MVKEMVENGITPDDSTYISLI 878



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 5/300 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +PE V    +Y+ +I       + D A  + D M  R V +TV T+++LV      G   
Sbjct: 588 KPEAV----MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 643

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           EA      M   G APD   ++I+I+  C++    +A   F+++  +     V+ YT L+
Sbjct: 644 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 703

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
               + G + E +++F E    GI+P++  Y+ +I++    G I RA ++  EM +    
Sbjct: 704 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 763

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +T+N LMR      R ++  ++ ++M   G + D +TYN LI  +   G ++DA+++
Sbjct: 764 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 823

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            N M+ KG NP   T+N + + + K G  + A  M  +M +    P+  TY  L++   T
Sbjct: 824 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 883



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 42/327 (12%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D  + +       +  ++R  C AG  + A  + R+M     +PN  TY+ VI   C 
Sbjct: 476 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCS 531

Query: 300 CGQITRAHDVFAEMLE-VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADT 357
            G++  A D+  EM E  G  PN  T+  ++    K  R ++ ++V+++M   G  + + 
Sbjct: 532 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 591

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + YN LI  +C  GKL+ A+   + MV +G     +T+N++   +   G    A+ +  +
Sbjct: 592 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 651

Query: 418 MKDLKCEPNTVTYNILMQ---------------------------------MFATSKSTD 444
           M      P+  TYNIL+                                  ++A SK   
Sbjct: 652 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 711

Query: 445 M--VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           +    KL  E     + P++  Y  LI  +   G+ + A++ + EM E+K + P    Y 
Sbjct: 712 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYN 770

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++ L   G++ +  +L+++M +RG 
Sbjct: 771 TLMRGLCLLGRVDEARKLIDEMTERGI 797



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 7/228 (3%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +FA+M  +     + TFN ++R    A +  + L++  QM R     + +TYN +I 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 366 CHCKDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKC 423
             C  G+++ A+ ++  M  R G  PN  T+  +     K+G V+ A +++ +M    + 
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P  V YN L+  +      D  L  +  M E  V   V TY +L+      G    AY+
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + EM   K L P    Y +++    + G ++K  E+ E M  RG  A
Sbjct: 648 LVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 694


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 187/384 (48%), Gaps = 2/384 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           P +YH ++  A +   F  +   ++ M ++   +     ++++      G   EAV    
Sbjct: 146 PPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLR 205

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
           ++  +GC  D ++++ V+  LC  +R  + +   D + +    P+++ +  L+   CR G
Sbjct: 206 KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG 265

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
                  V  +M   G  P++  Y+ +ID +C+ G +  A+++   M   G +PN + +N
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +++    A R ++  ++ ++M +  C  D +T+N L+D  C++G ++  I++L  M+  
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC P+  T+  +     K G ++ A  +   M    C+PNTV+Y I+++   ++      
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +L  +M +    PN  T+  LI   C  G    A + +++M+   C  P    Y  V+ 
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVID 504

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +AG+ ++  EL+  MV++G +
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGIS 528



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 171/352 (48%), Gaps = 3/352 (0%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K    ++A   ++ M S  ++  V  ++ +++    A    EA  
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
             + M +  C  D + F+I++   C+           +  L     PDVI YT ++ G+C
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC  G+   A ++ ++M++ GC PN +
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K GK E+A+++LN M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG +PN   ++ I   +S+ G VN   +M+  +KD     + V YN ++        T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           D  +     M  N   PN +TY +LI      G    A + + E+     L+
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 164/351 (46%), Gaps = 2/351 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF  +VR     G  A+A+   + M   GCAP    + +++   CR      +    +++
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 245 KDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K         NLV    C  G + EA  + R++   G + ++ +Y+ V+  LC   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  EM+ V C PN +TFN L+    +    E+V +V  QM   GC  D   Y  +
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+G LE A ++LN M   G  PN   +N + + +        A  +  +M    C
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             + VT+NIL+  F  +   D V++L ++M  +   P+V TY  +I  +C  G  + A  
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            ++ M    C KP +  Y +VL+ L  AG+    EEL+ +M+ +G    P+
Sbjct: 413 LLKSMSSCGC-KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 3/280 (1%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+   +  +VRG C  G I++A  V  EM   G  P    Y ++++A CR G    +  V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M   GC  ++   N ++    +    ++ + +  ++   GCEAD ++YN ++   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +  D  ++++ MVR  C PN  TFN +   + + G     H +  +M +  C P+   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  ++         ++  ++   M    ++PNV  Y  ++   C    W  A + + EM 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 490 EEKCLKPGSSV-YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ C  P   V + +++    + G + +  EL+E+M+  G
Sbjct: 349 QKDC--PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 187/384 (48%), Gaps = 2/384 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           P +YH ++  A +   F  +   ++ M ++   +     ++++      G   EAV    
Sbjct: 146 PPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLR 205

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
           ++  +GC  D ++++ V+  LC  +R  + +   D + +    P+++ +  L+   CR G
Sbjct: 206 KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG 265

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
                  V  +M   G  P++  Y+ +ID +C+ G +  A+++   M   G +PN + +N
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +++    A R ++  ++ ++M +  C  D +T+N L+D  C++G ++  I++L  M+  
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC P+  T+  +     K G ++ A  +   M    C+PNTV+Y I+++   ++      
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +L  +M +    PN  T+  LI   C  G    A + +++M+   C  P    Y  V+ 
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVID 504

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +AG+ ++  EL+  MV++G +
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGIS 528



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 171/352 (48%), Gaps = 3/352 (0%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K    ++A   ++ M S  ++  V  ++ +++    A    EA  
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
             + M +  C  D + F+I++   C+           +  L     PDVI YT ++ G+C
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC  G+   A ++ ++M++ GC PN +
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K GK E+A+++LN M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG +PN   ++ I   +S+ G VN   +M+  +KD     + V YN ++        T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           D  +     M  N   PN +TY +LI      G    A + + E+     L+
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 164/351 (46%), Gaps = 2/351 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF  +VR     G  A+A+   + M   GCAP    + +++   CR      +    +++
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 245 KDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K         NLV    C  G + EA  + R++   G + ++ +Y+ V+  LC   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  EM+ V C PN +TFN L+    +    E+V +V  QM   GC  D   Y  +
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK+G LE A ++LN M   G  PN   +N + + +        A  +  +M    C
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             + VT+NIL+  F  +   D V++L ++M  +   P+V TY  +I  +C  G  + A  
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            ++ M    C KP +  Y +VL+ L  AG+    EEL+ +M+ +G    P+
Sbjct: 413 LLKSMSSCGC-KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 3/280 (1%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+   +  +VRG C  G I++A  V  EM   G  P    Y ++++A CR G    +  V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M   GC  ++   N ++    +    ++ + +  ++   GCEAD ++YN ++   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +  D  ++++ MVR  C PN  TFN +   + + G     H +  +M +  C P+   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  ++         ++  ++   M    ++PNV  Y  ++   C    W  A + + EM 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 490 EEKCLKPGSSV-YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ C  P   V + +++    + G + +  EL+E+M+  G
Sbjct: 349 QKDC--PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386


>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 219/462 (47%), Gaps = 14/462 (3%)

Query: 74  NPNPSSNSNPSL--NPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGV------RHG 125
           +P  SS  N SL  N +     ++   S     HS+  S V    E   GV       HG
Sbjct: 27  HPFSSSTDNQSLHQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHG 86

Query: 126 IPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVD 184
            PL Q L FFN+   R  F H+      M+ + G+ R+FD  W  +  +K ++   I++ 
Sbjct: 87  NPL-QALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLR 145

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T  +++ R  +     + V +F + +++    D   F+ ++  LC+++   +A++ +  L
Sbjct: 146 TVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGL 205

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K  F P++  +  L+ GW  +    EAE  F EM   G++P+V +Y+ ++D  C+  ++ 
Sbjct: 206 KSMFRPNLQTFNILLSGWKSS---EEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMD 262

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A  V  +M +     + IT+ +++       + +K   +  +MK  GC  D   YN  I
Sbjct: 263 KAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATI 322

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
              C   +L +A  +L+ MV KG +PNA+T+N+ FR      D+  A  +Y +M D  C 
Sbjct: 323 RNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCL 382

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PNT +   L+++F   +  +M L+L  +M +      +     L  + C +G    A   
Sbjct: 383 PNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESC 442

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
             +M+ +K  KP  + ++ +   +  A + +  + L +KM D
Sbjct: 443 FLQMV-DKGHKPSYTSFKRIKVLMELANKHEALQNLSKKMDD 483



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 5/240 (2%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T  +V+  + +   + +  + F +  +   E +   FN L+R   +         VY+ +
Sbjct: 146 TVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGL 205

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           K +    +  T+N L+         E+A    + M+  G  P+  ++N +     K  ++
Sbjct: 206 KSM-FRPNLQTFNILLSGWKSS---EEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREM 261

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A ++ GKM+D     + +TY  ++         D    + KEM+E    P+V  Y   
Sbjct: 262 DKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNAT 321

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +C     + A+  + EM+  K L P ++ Y +  +    +  LQ    L  +M+D G
Sbjct: 322 IRNFCIAKRLHEAFDLLDEMVN-KGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTG 380


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 188/430 (43%), Gaps = 37/430 (8%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            R    H    ++ +I    K  Q   A   ++ M S  +     TF+ +++ Y+  G  
Sbjct: 195 VRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNL 254

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNL 258
             A+    +M EYGC    +  +++I+  C++ R  +A SF  +++ + F PD   Y  L
Sbjct: 255 DGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTL 314

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           V G C+ G+   A  V   M + G+ P++YTY+ +I  LC+ G+I  A  +  +M+   C
Sbjct: 315 VNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDC 374

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQV---------------------------------- 344
            PN++T+N ++    K +R ++  ++                                  
Sbjct: 375 SPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMD 434

Query: 345 -YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            + +MK  GC  D  TYN LID  C   KLE+A+ +L  M   GC  N   +N +     
Sbjct: 435 LFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFC 494

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K   +  A  ++ +M+      ++VTYN L+     SK  +   +L  +M    + P+  
Sbjct: 495 KNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKF 554

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY  L+T +C  G    A   ++ M    C  P    Y  ++  L +AG++Q    L+  
Sbjct: 555 TYNSLLTHFCKTGDIKKAADIVQTMTSSGC-NPDIVTYATLISGLCKAGRVQVASRLLRS 613

Query: 524 MVDRGFTARP 533
           +  +G    P
Sbjct: 614 IQMKGMVLTP 623



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 197/403 (48%), Gaps = 8/403 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           Q LSF     +       PD   Y+ ++N   K+     A   +D M    ++  + T++
Sbjct: 291 QALSFIQEAVSEG---FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            L+    + G   EAV   ++M    C+P+ + ++ +IS LC++ R  EA      L  K
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PDV  + +L++G C + N   A  +F EMK  G +P+ +TY+++ID+LC   ++  A
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            ++  EM   GC  N + +N L+    K  R E+  +++++M+  G   D++TYN LID 
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK  ++EDA ++++ M+ +G  P+  T+N +     K GD+  A  +   M    C P+
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VTY  L+     +    +  +L + ++   +    + Y  +I         + A +  R
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFR 647

Query: 487 EMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRG 528
           EM+ +K   P +  Y++V + L    G + +  +   +M++RG
Sbjct: 648 EML-DKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERG 689



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 195/424 (45%), Gaps = 7/424 (1%)

Query: 104 AHSISPS-TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
            H + P  T + +IE    +R     +  L  FNW + +P FV S  +Y E++   GK  
Sbjct: 55  VHHLPPDFTPKQLIET---LRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAG 111

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME-EYGCAPDKIAF 221
            F+     ++ MK    E     F I V  Y +  L  E V     ME EY   PD   +
Sbjct: 112 SFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFY 171

Query: 222 SIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           ++++++L    +    +S   S+ + +   DV  +  L++  C+A  +  A  +  EM  
Sbjct: 172 NVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS 231

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G+ P+  T++ ++      G +  A  +  +M+E GC    +T N L+    K  R ++
Sbjct: 232 YGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQ 291

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            L    +    G   D  TYN L++  CK G  + A++V+++M+  G +P+  T+N +  
Sbjct: 292 ALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLIS 351

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + KLG++  A ++  +M    C PN VTYN ++         D   ++ + +    + P
Sbjct: 352 GLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILP 411

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +V T+  LI   C   +  +A     EM  + C +P    Y M++  L  + +L++   L
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC-RPDEFTYNMLIDSLCSSRKLEEALNL 470

Query: 521 VEKM 524
           +++M
Sbjct: 471 LKEM 474


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 169/319 (52%), Gaps = 7/319 (2%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLK----DKFEPDVIVYTNLVRGWCRAGNISEAE 272
           D ++++ V++ LCR+     A +   ++         P+ + YT L+R  C      +A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + R M+ AG++ +V TY  +I  LC   ++ +A ++  EM E G EPN + +++L++ +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K+ R E V +V+ +M   G E D + Y  LID  CK GK + A  V++ MVR+G  PN 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N++  C+ K G V  A  +  KM +    P+ VTYN L++  +     D  + L +E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 453 M--EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           M   +N V+PNV T+  +I   C +G    A++ +R M+EE         Y +++  L R
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ-VRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 511 AGQLQKHEELVEKMVDRGF 529
             +++K  EL+++M   G 
Sbjct: 375 VHKVRKAMELMDEMTSLGL 393



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 164/320 (51%), Gaps = 4/320 (1%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
            C P+ +++++++  LC  R A +A     S++      DV+ Y  L+RG C A  + +A
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             +  EM  +GI+PNV  YS ++   C+ G+      VF EM E G EP+ + +  L+  
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K  + +K   V + M R G E + +TYN LI+C CK+G +++AI VL  M  KG  P+
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLK--CEPNTVTYNILMQMFATSKSTDMVLKL 449
             T+N + + +S + +++ A  +  +M   K   +PN VT+N ++Q            ++
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
           +  MEE     N+ TY +LI     +     A + + EM     L+P S  Y ++++   
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG-LEPDSFTYSILIKGFC 408

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           +  Q+ + E+L+  M DRG 
Sbjct: 409 KMWQVDRAEDLLSTMRDRGI 428



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 173/372 (46%), Gaps = 5/372 (1%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R  D A   +  M+S  V   V T+  L+R    A    +AV     M E G  P+ + +
Sbjct: 129 RLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY 188

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           S ++   C+  R  +    F  + +K  EPDV++YT L+   C+ G   +A  V   M  
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G++PNV TY+++I+ +C+ G +  A  V  +M E G  P+ +T+N L++        ++
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 341 VLQVYNQMKRLG--CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            + +  +M R     + + +T+N +I   C  G++  A +V   M   GC  N  T+N++
Sbjct: 309 AMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + ++  V  A  +  +M  L  EP++ TY+IL++ F      D    L   M +  +
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP +  Y  L+   C  G    A     EM  +         Y  ++    +AG L+  +
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAK 486

Query: 519 ELVEKMVDRGFT 530
           EL++ +VD G T
Sbjct: 487 ELLKSIVDEGLT 498



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 179/382 (46%), Gaps = 5/382 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I       + D A   +  M    +E  V  +S L++ Y ++G   +    F  M 
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS 212

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD + ++ +I  LC+  +A +A    D + +   EP+V+ Y  L+   C+ G++ 
Sbjct: 213 EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVK 272

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG--CEPNSITFNN 327
           EA  V ++M   G+ P+V TY+ +I  L    ++  A  +  EM+      +PN +TFN+
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++      R  +  QV   M+  GC  + +TYN LI    +  K+  A+++++ M   G
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P++ T++++ +   K+  V+ A  +   M+D   EP    Y  L+         +   
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERAR 452

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L  EM +N    +V  Y  +I   C  G    A + ++ +++E  L P +  Y +V+  
Sbjct: 453 NLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG-LTPDAVTYSIVINM 510

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
             ++G ++    ++++M   GF
Sbjct: 511 FAKSGDMEAANGVLKQMTASGF 532



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 169/347 (48%), Gaps = 6/347 (1%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y  +I+   KV +   A   +D+M  R +E  V T+++L+    + G   EA+  
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGV 277

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL---KDKFEPDVIVYTNLVRGW 262
             +M E G APD + ++ +I  L       EA    + +   K+  +P+V+ + ++++G 
Sbjct: 278 LKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGL 337

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G + +A +V   M+  G   N+ TY+++I  L R  ++ +A ++  EM  +G EP+S
Sbjct: 338 CDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T++ L++   K  + ++   + + M+  G E +   Y  L+   C+ G +E A  + N 
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M       +   ++ +     K GD+  A  +   + D    P+ VTY+I++ MFA S  
Sbjct: 458 M-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGD 516

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
            +    + K+M  +   P+V  +  LI  Y   G  N   + IREMI
Sbjct: 517 MEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 4/199 (2%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD +   I + G  K+ Q D A   +  M+ R +E  +  +  L+      G+   A + 
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNL 454

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           FN M+      D +A+S +I   C+      A+    S+ D+   PD + Y+ ++  + +
Sbjct: 455 FNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G++  A  V ++M  +G  P+V  +  +I      G+I +  ++  EM+      +S  
Sbjct: 514 SGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKI 573

Query: 325 FNNLMRVHVKASRTEKVLQ 343
            + L    V ++  + +LQ
Sbjct: 574 ISTLSTSLVASNEGKALLQ 592


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 194/384 (50%), Gaps = 6/384 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRM 209
           Y  +I    +  + DL +  +  +  +   +   TF+ L++        ++A+     RM
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----FEPDVIVYTNLVRGWCRA 265
            E  C PD  + +I++  LC + R+ EA      + D       PDV+ YT ++ G+ + 
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G+  +A   + EM    I P+V TYS +I ALC+   + +A +V   M++ G  PN +T+
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+++  +  + + ++ +    +M+  G E D +TYN L+D  CK+G+  +A K+ +SM +
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G  P+ +T+  + +  +  G +   H +   M      P+   +NIL+  +A  +  D 
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            + +  +M ++ + PNV TY  +I + C  G  ++A  Y  +MI+E  L P   VY  ++
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG-LTPNIIVYTSLI 448

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L    +  K EEL+ +M+DRG 
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGI 472



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 180/362 (49%), Gaps = 2/362 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      F+IL+  Y +     EA+  F++M ++G  P+ + +  VI ILC
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +     +A  +F+ + D+   P++IVYT+L+   C      +AE +  EM   GI  N  
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            ++ +I + C+ G++  +  +F  M+ +G +PN IT++ L+  +  A + ++  ++ + M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             +G + D +TYN LI+ +C+  +++DA+ +   MV  G +PN  T+N+I + +      
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A  +Y  +     +    TYNI++     +  TD  L++ + +   +++    T+ I+
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I     +G  N+  K +        L P    Y ++ + +   G L++ ++L   M D G
Sbjct: 658 IGALLKVGR-NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNG 716

Query: 529 FT 530
            T
Sbjct: 717 CT 718



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 189/379 (49%), Gaps = 10/379 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R +E  + T+  L++ Y   G   E    
Sbjct: 299 PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHAL 358

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
            + M   G  PD   F+I+I    ++ +  EA   F  ++     P+V+ Y  ++   C+
Sbjct: 359 LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCK 418

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G++ +A   F +M   G+ PN+  Y+ +I +LC   +  +A ++  EML+ G   N+I 
Sbjct: 419 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF 478

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+++  H K  R  +  ++++ M R+G + + ITY+ LID +C  GK+++A K+L+SM 
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+N +     ++  ++ A  ++ +M      PN +TYNI++Q    ++ T 
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVY 501
              +L   + ++  +  ++TY I++   C     NN       M +  C   L+  +  +
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLC----KNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 502 EMVLQQLRRAGQLQKHEEL 520
            +++  L + G+  + ++L
Sbjct: 655 NIMIGALLKVGRNDEAKDL 673



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 38/361 (10%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I    K +  D A   +  M    V     T++ ++  Y  +    EA+ 
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG 287

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
              +M   G  PD + ++ ++  LC+  R++EA+  FDS+ K   EPD+  Y  L++G+ 
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 264 RAG-----------------------------------NISEAERVFREMKMAGIQPNVY 288
             G                                    + EA  VF +M+  G+ PNV 
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY  VI  LC+ G +  A   F +M++ G  PN I + +L+       + +K  ++  +M
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              G   +TI +N +I  HCK+G++ ++ K+ + MVR G  PN  T++ +       G +
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A ++   M  +  +P+ VTYN L+  +      D  L L KEM  + V PN+ TY I+
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 469 I 469
           +
Sbjct: 588 L 588



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 174/384 (45%), Gaps = 37/384 (9%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++ ++  + + G + +A   ++ M +   +PD + +S +I+ LC+ +   +A     
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           ++ K+   P+ + Y +++ G+C +    EA    ++M+  G++P+V TY+ ++D LC+ G
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G EP+  T+  L++ +       ++  + + M R G   D   +N
Sbjct: 316 RSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN 375

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K  K+++A+ V + M + G NPN  T+  +   + K G V+ A   + +M D 
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435

Query: 422 KCEPNTVTYNILMQMFAT----SKSTDMVL------------------------------ 447
              PN + Y  L+          K+ +++L                              
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495

Query: 448 -KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            KL   M    V+PNV TY  LI  YC  G  + A K +  M     +KP    Y  ++ 
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG-MKPDCVTYNTLIN 554

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
              R  ++     L ++MV  G +
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVS 578



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 12/303 (3%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA-----GIQPNVYTY 290
           +A+  FD L  +     I   N  R        S A  V R  +MA      + P V+TY
Sbjct: 33  DARHVFDELLRRGRGASIYGLN--RALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I+I   CR G++         +++ G    +ITF  L++      RT   +  V  +M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK---GCNPNASTFNMIFRCISKLG 406
            L C  D  +   L+   C + + ++A+++L+ M      G  P+  ++  +     K G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           D + A+  Y +M D +  P+ VTY+ ++      ++ D  +++   M +N V PN  TY 
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++  YC       A  ++++M  +  ++P    Y  ++  L + G+  +  ++ + M  
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDG-VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 527 RGF 529
           RG 
Sbjct: 330 RGL 332



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 5/258 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           LAGK+   D A   +  M S  ++    T++ L+  Y R     +A+  F  M   G +P
Sbjct: 523 LAGKM---DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + I ++I++  L   RR + A+  +  + K   + ++  Y  ++ G C+     EA R+F
Sbjct: 580 NIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           + + +  +Q    T++I+I AL + G+   A D+F      G  PN  T+  +    +  
Sbjct: 640 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 699

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              E++ Q++  M+  GC  D+   NF++    + G++  A   L+ +  K  +  AST 
Sbjct: 700 GLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTA 759

Query: 396 NMIFRCISKLGDVNGAHR 413
           ++    +S  G     HR
Sbjct: 760 SLFIDLLSG-GKYQEYHR 776


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 184/364 (50%), Gaps = 3/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F+  M    V   V T++ILVR     G   EAV     M   GCAP+ + ++ +++
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 227 ILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
             CR      A+     ++++   +P+++ + ++V G C+AG +  A +VF EM   G+ 
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA 255

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+V +Y+ ++   C+ G +  +  VF+EM + G  P+ +TF +L+    KA   E+ + +
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             QM+  G   + +T+  LID  CK G L+DA+  +  M + G  P+   +N +     K
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           LG ++ A  +  +M+  + +P+ VTY+ ++  +    + D   +L ++M +  V P+  T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI   C     N+A +    M++   ++P    Y  ++    + G ++K   L ++M
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLG-VQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 525 VDRG 528
           + +G
Sbjct: 495 IRKG 498



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 2/344 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           F  L+R Y      + A  A       G AP   A++ V+  L      S  +     L+
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               P+V  Y  LVR  C  G + EA  V  +M+ AG  PN  TY+ ++ A CR G++  
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205

Query: 306 AHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           A  V + M E G  +PN +TFN+++    KA R E   +V+++M R G   D ++YN L+
Sbjct: 206 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
             +CK G L +++ V + M ++G  P+  TF  +     K G++  A  +  +M++    
Sbjct: 266 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            N VT+  L+  F      D  L   +EM +  ++P+V  Y  LI  YC +G  + A + 
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           IREM E K +KP    Y  ++    + G L    +L +KM+ +G
Sbjct: 386 IREM-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 176/342 (51%), Gaps = 3/342 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCA-PDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ LV  + RAG    A    + M E G A P+ + F+ +++ LC+  R   A+  FD 
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 244 L-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + ++   PDV+ Y  L+ G+C+ G + E+  VF EM   G+ P+V T++ +I A C+ G 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + +A  + A+M E G   N +TF  L+    K    +  L    +M++ G +   + YN 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI+ +CK G+++ A +++  M  K   P+  T++ I     K+G+++ A ++  KM    
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TY+ L++     K  +   +L + M +  V+P+  TY  LI  +C  G+   A 
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               EMI +  L P    Y +++  L ++ + ++   L+ K+
Sbjct: 489 SLHDEMIRKGVL-PDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 187/387 (48%), Gaps = 24/387 (6%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +++   KV     +      M  R +   V TF+ L+    +AG   +AV 
Sbjct: 255 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 314

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
              +M E G   +++ F+ +I   C+K    +A    + ++    +P V+ Y  L+ G+C
Sbjct: 315 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 374

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G +  A  + REM+   ++P+V TYS +I   C+ G +  A  +  +ML+ G  P++I
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+++L+R   +  R     +++  M +LG + D  TY  LID HCK+G +E A+ + + M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +RKG  P+  T++++   +SK      AHR+  K+      P+ + Y+ LM   + ++  
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
            +V  LK                     +C  G    A K  + M++    K   SVY +
Sbjct: 555 SVVALLKG--------------------FCMKGLMKEADKVYQSMLDRN-WKLDGSVYSI 593

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++    R G ++K     ++M+  GF+
Sbjct: 594 LIHGHCRGGNVRKALSFHKQMLRSGFS 620



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 38/341 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+ + DLA   I  M+++ V+  V T+S ++  Y + G    A     +M 
Sbjct: 366 YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD I +S +I  LC ++R ++A   F++ L+   +PD   YT L+ G C+ GN+ 
Sbjct: 426 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +  EM   G+ P+V TYS++I+ L +  +   AH +  ++      P++I ++ LM
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545

Query: 330 RVHVKASRTEKVL---------------QVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
               KA     V                +VY  M     + D   Y+ LI  HC+ G + 
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A+     M+R G +PN+++   + R + + G V  A      +  L C P         
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL--LTCCP--------- 654

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
              A ++++  ++ L      N  E NV+    LI + CGM
Sbjct: 655 --LADAEASKALIDL------NRKEGNVDA---LIDVLCGM 684



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 16/259 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    + ++ + A    + M    V+    T++ L+  + + G   +A+   + M 
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF------DSLKDKFEPDVIVY--------- 255
             G  PD + +S++I+ L +  R  EA          D + D  + D ++          
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555

Query: 256 -TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
              L++G+C  G + EA++V++ M     + +   YSI+I   CR G + +A     +ML
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  PNS +  +L+R   +     +       +      AD      LID + K+G ++
Sbjct: 616 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVD 675

Query: 375 DAIKVLNSMVRKGCNPNAS 393
             I VL  M R G  P++ 
Sbjct: 676 ALIDVLCGMARDGLLPSSG 694


>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 219/462 (47%), Gaps = 14/462 (3%)

Query: 74  NPNPSSNSNPSL--NPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGV------RHG 125
           +P  SS  N SL  N +     ++   S     HS+  S V    E   GV       HG
Sbjct: 27  HPFSSSTDNQSLHQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHG 86

Query: 126 IPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVD 184
            PL Q L FFN+   R  F H+      M+ + G+ R+FD  W  +  +K ++   I++ 
Sbjct: 87  NPL-QALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLR 145

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T  +++ R  +     + V +F + +++    D   F+ ++  LC+++   +A++ +  L
Sbjct: 146 TVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGL 205

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K  F P++  +  L+ GW  +    EAE  F EM   G++P+V +Y+ ++D  C+  ++ 
Sbjct: 206 KSMFRPNLQTFNILLSGWKSS---EEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMD 262

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A  V  +M +     + IT+ +++       + +K   +  +MK  GC  D   YN  I
Sbjct: 263 KAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATI 322

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
              C   +L +A  +L+ MV KG +PNA+T+N+ FR      D+  A  +Y +M D  C 
Sbjct: 323 RNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCL 382

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PNT +   L+++F   +  +M L+L  +M +      +     L  + C +G    A   
Sbjct: 383 PNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESC 442

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
             +M+ +K  KP  + ++ +   +  A + +  + L +KM D
Sbjct: 443 FLQMV-DKGHKPSYTSFKRIKVLMELANKHEALQNLSKKMDD 483



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 5/240 (2%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T  +V+  + +   + +  + F +  +   E +   FN L+R   +         VY+ +
Sbjct: 146 TVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGL 205

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           K +    +  T+N L+         E+A    + M+  G  P+  ++N +     K  ++
Sbjct: 206 KSM-FRPNLQTFNILLSGWKSS---EEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREM 261

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A ++ GKM+D     + +TY  ++         D    + KEM+E    P+V  Y   
Sbjct: 262 DKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNAT 321

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +C     + A+  + EM+  K L P ++ Y +  +    +  LQ    L  +M+D G
Sbjct: 322 IRNFCIAKRLHEAFDLLDEMVN-KGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTG 380


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 21/364 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y +++N      + +LA+   + MK   +   V T++I+V  + +AGL  +A 
Sbjct: 438 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 497

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
             FN M E GC P+ + ++ +I    + ++ S A   F++ L +   P+++ Y+ L+ G 
Sbjct: 498 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 557

Query: 263 CRAGNISEAERVFREMKMAGIQ------------------PNVYTYSIVIDALCRCGQIT 304
           C+AG + +A ++F   +M G +                  PNV TY  ++D  C+  ++ 
Sbjct: 558 CKAGQVEKACQIFE--RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 615

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +   M   GCEPN I ++ L+    K  + ++  +V  +M   G  A   TY+ LI
Sbjct: 616 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 675

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D + K  + + A KVL+ M+   C PN   +  +   + K+G  + A+++   M++  C+
Sbjct: 676 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 735

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN VTY  ++  F      +  L+L + M    V PN  TYR+LI   C  G  + A+  
Sbjct: 736 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 795

Query: 485 IREM 488
           + EM
Sbjct: 796 LEEM 799



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 185/382 (48%), Gaps = 18/382 (4%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            DLA      M +  V +     S   R    AG   +A      M   G  PD   +S 
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 447

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           V++ LC   +   A   F+ +K      DV  YT +V  +C+AG I +A + F EM+  G
Sbjct: 448 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 507

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             PNV TY+ +I A  +  +++ A+++F  ML  GC PN +T++ L+  H KA + EK  
Sbjct: 508 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567

Query: 343 QVYNQM-------------KRLGCEAD---TITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           Q++ +M             K+    ++    +TY  L+D  CK  ++E+A K+L++M  +
Sbjct: 568 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 627

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC PN   ++ +   + K+G ++ A  +  +M +        TY+ L+  +   K  D+ 
Sbjct: 628 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 687

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            K+  +M EN   PNV  Y  +I   C +G  + AYK + +M+EEK  +P    Y  ++ 
Sbjct: 688 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK-LMQMMEEKGCQPNVVTYTAMID 746

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
                G+++   EL+E+M  +G
Sbjct: 747 GFGMIGKIETCLELLERMGSKG 768



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 177/411 (43%), Gaps = 24/411 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y ++I+   +   F+ A  F++ M++ +    V T+S L+   +         
Sbjct: 257 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 316

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
              N M   GC P    F+ ++   C     S A      + K    P  +VY  L+   
Sbjct: 317 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 376

Query: 263 CRAGN------ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           C   +      +  AE+ + EM  AG+  N    S     LC  G+  +A  V  EM+  
Sbjct: 377 CGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 436

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P++ T++ ++     AS+ E    ++ +MKR G  AD  TY  ++D  CK G +E A
Sbjct: 437 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 496

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-- 434
            K  N M   GC PN  T+  +     K   V+ A+ ++  M    C PN VTY+ L+  
Sbjct: 497 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 556

Query: 435 -----------QMF---ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                      Q+F     SK    V    K+ ++N   PNV TY  L+  +C       
Sbjct: 557 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 616

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           A K +  M  E C +P   VY+ ++  L + G+L + +E+  +M + GF A
Sbjct: 617 ARKLLDAMSMEGC-EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 666



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 180/442 (40%), Gaps = 50/442 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           V+SFF W   +  + H+  +Y+ +++L  +     +   F+  ++  + E+     ++LV
Sbjct: 107 VISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLV 166

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI----------------------- 227
           R++ R G  + A+    R++++   P +  ++ +I                         
Sbjct: 167 RKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLR 226

Query: 228 ------------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
                       LC+  +  EA +  ++  + F PD + YT L+ G C A    EA    
Sbjct: 227 MDGFTLRCFAYSLCKVGKWREALTLVET--ENFVPDTVFYTKLISGLCEASLFEEAMDFL 284

Query: 276 REMKMAGIQPNVYTYSIVIDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
             M+     PNV TYS +   LC C    Q+ R   V   M+  GC P+   FN+L+  +
Sbjct: 285 NRMRATSCLPNVVTYSTL---LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 341

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRK 386
             +       ++  +M + G     + YN LI   C D        L+ A K  + M+  
Sbjct: 342 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAA 401

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N    +   RC+   G    A  +  +M      P+T TY+ ++     +   ++ 
Sbjct: 402 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 461

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L +EM+   +  +V TY I++  +C  G    A K+  EM E  C  P    Y  ++ 
Sbjct: 462 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC-TPNVVTYTALIH 520

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
              +A ++    EL E M+  G
Sbjct: 521 AYLKAKKVSYANELFETMLSEG 542



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 38/283 (13%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   KV + D A      M       T+ T+S L+ RY +      A    ++M
Sbjct: 635 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E  CAP+ + ++ +I  LC+  +  EA      +++K  +P+V+ YT ++ G+   G I
Sbjct: 695 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 754

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-------------- 314
                +   M   G+ PN  TY ++ID  C+ G +  AH++  EM               
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 814

Query: 315 ----------------EVGCEPNSITFNNLMRVHV----KASRTEKVLQVYNQMKRLGCE 354
                           E+G + ++  F ++ R+ +    KA R E  L++  ++      
Sbjct: 815 IEGFNKEFIESLGLLDEIG-QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 873

Query: 355 A--DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               + TYN LI+  C   K+E A ++ + M +KG  P   +F
Sbjct: 874 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 916



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 108/242 (44%), Gaps = 5/242 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y EMI+   KV + D A+  + +M+ +  +  V T++ ++  +   G     +    RM
Sbjct: 705 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 764

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD-VIVYTNLVRGWCRAGNI 268
              G AP+ + + ++I   C+      A +  + +K    P     Y  ++ G+ +    
Sbjct: 765 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EF 822

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE--PNSITFN 326
            E+  +  E+      P +  Y ++ID L +  ++  A  +  E+          S T+N
Sbjct: 823 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 882

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +L+     A++ E   Q++++M + G   +  ++  LI    ++ K+ +A+ +L+ +   
Sbjct: 883 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 942

Query: 387 GC 388
            C
Sbjct: 943 VC 944


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 194/384 (50%), Gaps = 6/384 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRM 209
           Y  +I    +  + DL +  +  +  +   +   TF+ L++        ++A+     RM
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----FEPDVIVYTNLVRGWCRA 265
            E  C PD  + +I++  LC + R+ EA      + D       PDV+ YT ++ G+ + 
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G+  +A   + EM    I P+V TYS +I ALC+   + +A +V   M++ G  PN +T+
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+++  +  + + ++ +    +M+  G E D +TYN L+D  CK+G+  +A K+ +SM +
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G  P+ +T+  + +  +  G +   H +   M      P+   +NIL+  +A  +  D 
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            + +  +M ++ + PNV TY  +I + C  G  ++A  Y  +MI+E  L P   VY  ++
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG-LTPNIIVYTSLI 448

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L    +  K EEL+ +M+DRG 
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGI 472



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 191/388 (49%), Gaps = 10/388 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R +E  + T+  L++ Y   G   E    
Sbjct: 299 PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHAL 358

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
            + M   G  PD   F+I+I    ++ +  EA   F  ++     P+V+ Y  ++   C+
Sbjct: 359 LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCK 418

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G++ +A   F +M   G+ PN+  Y+ +I +LC   +  +A ++  EML+ G   N+I 
Sbjct: 419 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF 478

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+++  H K  R  +  ++++ M R+G + + ITY+ LID +C  GK+++A K+L+SM 
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+N +     ++  ++ A  ++ +M      PN +TYNI++Q    ++ T 
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVY 501
              +L   + ++  +  ++TY I++   C     NN       M +  C   L+  +  +
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLC----KNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++  L + G+  + ++L   +   G 
Sbjct: 655 NIMIGALLKVGRNDEAKDLFAALSANGL 682



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 38/361 (10%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I    K +  D A   +  M    V     T++ ++  Y  +    EA+ 
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG 287

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
              +M   G  PD + ++ ++  LC+  R++EA+  FDS+ K   EPD+  Y  L++G+ 
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 264 RAG-----------------------------------NISEAERVFREMKMAGIQPNVY 288
             G                                    + EA  VF +M+  G+ PNV 
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY  VI  LC+ G +  A   F +M++ G  PN I + +L+       + +K  ++  +M
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              G   +TI +N +I  HCK+G++ ++ K+ + MVR G  PN  T++ +       G +
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A ++   M  +  +P+ VTYN L+  +      D  L L KEM  + V PN+ TY I+
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 469 I 469
           +
Sbjct: 588 L 588



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 36/378 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      F+IL+  Y +     EA+  F++M ++G  P+ + +  VI ILC
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG------W-------------------- 262
           +     +A  +F+ + D+   P++IVYT+L+        W                    
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 263 ---------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                    C+ G + E+E++F  M   G++PNV TYS +ID  C  G++  A  + + M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
             VG +P+ +T+N L+  + + SR +  L ++ +M   G   + ITYN ++       + 
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A ++   + + G     ST+N+I   + K    + A RM+  +     +  T T+NI+
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +         D    L   +  N + P+V TY ++       G           M E  C
Sbjct: 658 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 717

Query: 494 LKPGSSVYEMVLQQLRRA 511
                 +  +V + L+R 
Sbjct: 718 TANSRMLNSIVRKLLQRG 735



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 174/384 (45%), Gaps = 37/384 (9%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++ ++  + + G + +A   ++ M +   +PD + +S +I+ LC+ +   +A     
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           ++ K+   P+ + Y +++ G+C +    EA    ++M+  G++P+V TY+ ++D LC+ G
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G EP+  T+  L++ +       ++  + + M R G   D   +N
Sbjct: 316 RSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN 375

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K  K+++A+ V + M + G NPN  T+  +   + K G V+ A   + +M D 
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435

Query: 422 KCEPNTVTYNILMQMFAT----SKSTDMVL------------------------------ 447
              PN + Y  L+          K+ +++L                              
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495

Query: 448 -KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            KL   M    V+PNV TY  LI  YC  G  + A K +  M     +KP    Y  ++ 
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG-MKPDCVTYNTLIN 554

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
              R  ++     L ++MV  G +
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVS 578



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 120/262 (45%), Gaps = 8/262 (3%)

Query: 275 FREMKMAG---IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           +  M  AG   + P V+TY I+I   CR G++         +++ G    +ITF  L++ 
Sbjct: 72  YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 332 HVKASRTEKVLQ-VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK---G 387
                RT   +  V  +M  L C  D  +   L+   C + + ++A+++L+ M      G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  ++  +     K GD + A+  Y +M D +  P+ VTY+ ++      ++ D  +
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           ++   M +N V PN  TY  ++  YC       A  ++++M  +  ++P    Y  ++  
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG-VEPDVVTYNSLMDY 310

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           L + G+  +  ++ + M  RG 
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGL 332



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 5/287 (1%)

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           K  P V  Y  L+   CRAG +         +   G +    T++ ++  LC   + + A
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 307 HD-VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM---KRLGCEADTITYNF 362
            D V   M E+ C P+  +   L++     +R+++ L++ + M   +  G   D ++Y  
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           +I+   K+G  + A    + M+ +  +P+  T++ I   + K   ++ A  +   M    
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             PN +TYN ++  + +S+     +   K+M  + VEP+V TY  L+   C  G    A 
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           K    M  ++ L+P  + Y  +LQ     G L +   L++ MV  G 
Sbjct: 322 KIFDSM-TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 118/243 (48%), Gaps = 4/243 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           LAGK+   D A   +  M S  ++    T++ L+  Y R     +A+  F  M   G +P
Sbjct: 523 LAGKM---DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + I ++I++  L   RR + A+  +  + K   + ++  Y  ++ G C+     EA R+F
Sbjct: 580 NIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           + + +  +Q    T++I+I AL + G+   A D+FA +   G  P+  T++ +    ++ 
Sbjct: 640 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 699

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              E++  ++  M+  GC A++   N ++    + G +  A   L+ +  K  +  AST 
Sbjct: 700 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTA 759

Query: 396 NMI 398
           +++
Sbjct: 760 SLL 762


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 169/319 (52%), Gaps = 7/319 (2%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLK----DKFEPDVIVYTNLVRGWCRAGNISEAE 272
           D ++++ V++ LCR+     A +   ++         P+ + YT L+R  C      +A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + R M+ AG++ +V TY  +I  LC   ++ +A ++  EM E G EPN + +++L++ +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K+ R E V +V+ +M   G E D + Y  LID  CK GK + A  V++ MVR+G  PN 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N++  C+ K G V  A  +  KM +    P+ VTYN L++  +     D  + L +E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 453 M--EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           M   +N V+PNV T+  +I   C +G    A++ +R M+EE         Y +++  L R
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ-VRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 511 AGQLQKHEELVEKMVDRGF 529
             +++K  EL+++M   G 
Sbjct: 375 VHKVRKAMELMDEMTSLGL 393



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 164/320 (51%), Gaps = 4/320 (1%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
            C P+ +++++++  LC  R A +A     S++      DV+ Y  L+RG C A  + +A
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             +  EM  +GI+PNV  YS ++   C+ G+      VF EM E G EP+ + +  L+  
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K  + +K   V + M R G E + +TYN LI+C CK+G +++AI VL  M  KG  P+
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLK--CEPNTVTYNILMQMFATSKSTDMVLKL 449
             T+N + + +S + +++ A  +  +M   K   +PN VT+N ++Q            ++
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
           +  MEE     N+ TY +LI     +     A + + EM     L+P S  Y ++++   
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG-LEPDSFTYSILIKGFC 408

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           +  Q+ + E+L+  M DRG 
Sbjct: 409 KMWQVDRAEDLLSTMRDRGI 428



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 173/372 (46%), Gaps = 5/372 (1%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R  D A   +  M+S  V   V T+  L+R    A    +AV     M E G  P+ + +
Sbjct: 129 RLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY 188

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           S ++   C+  R  +    F  + +K  EPDV++YT L+   C+ G   +A  V   M  
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G++PNV TY+++I+ +C+ G +  A  V  +M E G  P+ +T+N L++        ++
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 341 VLQVYNQMKRLG--CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            + +  +M R     + + +T+N +I   C  G++  A +V   M   GC  N  T+N++
Sbjct: 309 AMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + ++  V  A  +  +M  L  EP++ TY+IL++ F      D    L   M +  +
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP +  Y  L+   C  G    A     EM  +         Y  ++    +AG L+  +
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAK 486

Query: 519 ELVEKMVDRGFT 530
           EL++ +VD G T
Sbjct: 487 ELLKSIVDEGLT 498



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 179/382 (46%), Gaps = 5/382 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I       + D A   +  M    +E  V  +S L++ Y ++G   +    F  M 
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS 212

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD + ++ +I  LC+  +A +A    D + +   EP+V+ Y  L+   C+ G++ 
Sbjct: 213 EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVK 272

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG--CEPNSITFNN 327
           EA  V ++M   G+ P+V TY+ +I  L    ++  A  +  EM+      +PN +TFN+
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++      R  +  QV   M+  GC  + +TYN LI    +  K+  A+++++ M   G
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P++ T++++ +   K+  V+ A  +   M+D   EP    Y  L+         +   
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERAR 452

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L  EM +N    +V  Y  +I   C  G    A + ++ +++E  L P +  Y +V+  
Sbjct: 453 NLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG-LTPDAVTYSIVINM 510

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
             ++G ++    ++++M   GF
Sbjct: 511 FAKSGDMEAANGVLKQMTASGF 532



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 169/347 (48%), Gaps = 6/347 (1%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y  +I+   KV +   A   +D+M  R +E  V T+++L+    + G   EA+  
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGV 277

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL---KDKFEPDVIVYTNLVRGW 262
             +M E G APD + ++ +I  L       EA    + +   K+  +P+V+ + ++++G 
Sbjct: 278 LKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGL 337

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G + +A +V   M+  G   N+ TY+++I  L R  ++ +A ++  EM  +G EP+S
Sbjct: 338 CDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T++ L++   K  + ++   + + M+  G E +   Y  L+   C+ G +E A  + N 
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M       +   ++ +     K GD+  A  +   + D    P+ VTY+I++ MFA S  
Sbjct: 458 M-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGD 516

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
            +    + K+M  +   P+V  +  LI  Y   G  N   + IREMI
Sbjct: 517 MEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 4/199 (2%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD +   I + G  K+ Q D A   +  M+ R +E  +  +  L+      G+   A + 
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNL 454

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           FN M+      D +A+S +I   C+      A+    S+ D+   PD + Y+ ++  + +
Sbjct: 455 FNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G++  A  V ++M  +G  P+V  +  +I      G+I +  ++  EM+      +S  
Sbjct: 514 SGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKI 573

Query: 325 FNNLMRVHVKASRTEKVLQ 343
            + L    V ++  + +LQ
Sbjct: 574 ISTLSTSLVASNEGKALLQ 592


>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 200/415 (48%), Gaps = 18/415 (4%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF---IDLMKSRNVEITVDTF 186
           + L FF W T +  F H+P+ Y  M+ + G+ R  ++A +F   I+      V++    F
Sbjct: 93  KALRFFKW-TQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFF 151

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+R Y  AGL  E++  F  M+    +P  + F+ ++SIL ++ R + A+  +D +  
Sbjct: 152 NSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLG 211

Query: 247 KF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            +   PD   Y  L+RG+C+   + E  R FREM+      +V TY+ ++D LCR G++ 
Sbjct: 212 TYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVR 271

Query: 305 RAHDVFAEMLEV--GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
            A ++   M +   G  PN +T+  L+R +      E+ L V  +M   G + + ITYN 
Sbjct: 272 IARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNT 331

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           L+   C+  KL+    VL  M   G  +P+  TFN I       G+++ A +++  MK  
Sbjct: 332 LVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKF 391

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-------EPNVNTYRILITMYCG 474
           +   ++ +Y+ L++        DM  +L  E+ E E+       +P   +Y  +    C 
Sbjct: 392 RIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCE 451

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G    A + IR++++     P S  Y  V+    + G  +   EL+  M+ R F
Sbjct: 452 HGKTKKAERVIRQLMKRGTQDPQS--YTTVIMGHCKEGAYESGYELLMWMLRRDF 504



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 180/348 (51%), Gaps = 14/348 (4%)

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV----Y 255
           ++A+  F   ++ G +    ++ I++ IL R+R  + A++F  S++   +  V +    +
Sbjct: 92  SKALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFF 151

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +L+R +  AG   E+ ++F+ MK   + P+V T++ ++  L + G+   A +V+ EML 
Sbjct: 152 NSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLG 211

Query: 316 V-GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  P++ T+N L+R   K S  ++  + + +M+   C+AD +TYN L+D  C+ GK+ 
Sbjct: 212 TYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVR 271

Query: 375 DAIKVLNSMVRK--GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            A  ++N M +K  G NPN  T+  + R      +V  A  +  +M     +PN +TYN 
Sbjct: 272 IARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNT 331

Query: 433 LMQMFATSKSTDMVLKLKKEME-ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           L++    +   D +  + + M+ +    P+  T+  +I ++C  G+ + A K    M + 
Sbjct: 332 LVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKF 391

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR-----GFTARPL 534
           + +   S+ Y  +++ L + G     E+L +++ ++      F ++PL
Sbjct: 392 R-IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPL 438



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 164/340 (48%), Gaps = 15/340 (4%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L+R + +  +  E    F  ME + C  D + ++ ++  LCR  +   A++  + +
Sbjct: 221 TYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGM 280

Query: 245 KDKFE---PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
             K E   P+V+ YT L+RG+C    + EA  V  EM   G++PN+ TY+ ++  LC   
Sbjct: 281 GKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAH 340

Query: 302 QITRAHDVFAEML-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           ++ +  DV   M  + G  P++ TFN ++ +H  A   ++ L+V+  MK+    AD+ +Y
Sbjct: 341 KLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASY 400

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRK-------GCNPNASTFNMIFRCISKLGDVNGAHR 413
           + LI   C+ G  + A ++ + +  K       G  P A+++N IF  + + G    A R
Sbjct: 401 STLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAER 460

Query: 414 MYGK-MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +  + MK    +P   +Y  ++       + +   +L   M   +  P++  Y  LI  +
Sbjct: 461 VIRQLMKRGTQDPQ--SYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGF 518

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
                   A + + +M++    +P +S +  VL +L   G
Sbjct: 519 LQKDKPLLAKETLEKMLKSS-YQPKTSTWHSVLAKLLEKG 557


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 190/399 (47%), Gaps = 36/399 (9%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   + +M  R  +  + T++ L+  Y       EA   FNRM + G  PD + ++++I 
Sbjct: 284 AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+ +   EA   F  L +K   P +  Y +L+ G C +G IS  +++  EM  +   P
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V TY+I+IDALC+ G+I  A  V   M++ G +PN +T+N +M  +   +       ++
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N+M + G E D + YN LI+ +CK   +++AI +   M  K   P+ +++N +   +  L
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL---------------- 449
           G +     +  +M D    P+ +TYNIL+  F  ++  D  + L                
Sbjct: 524 GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNH 583

Query: 450 ----------KKEMEENEVE--------PNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
                     K +M E+ ++        PNV TY ILI   C  G +  A   + +M E+
Sbjct: 584 AIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKM-ED 642

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               P +  +E+++  L +  +  K E+L E+M+ RG  
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 8/354 (2%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R + +   T++ L+      G   E      +M      PD   F+I+I  LC++ R  E
Sbjct: 224 RGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE 283

Query: 237 AQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           AQ     +  + E PD++ Y  L+ G+C   N+ EA  +F  M   G++P+V  Y+++ID
Sbjct: 284 AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
             C+   +  A  +F E+      P   ++N+L+     + R   V ++ ++M       
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D +TYN LID  CK+G++ +A+ VL  M++KG  PN  T+N +        +VN A  ++
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +M     EP+ + YN+L+  +  ++  D  + L KEM    + P++ +Y  LI   C +
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523

Query: 476 GHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           G       +++E+++E C     P    Y ++L    +     K   L  ++V+
Sbjct: 524 GRI----PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 185/380 (48%), Gaps = 2/380 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           ++ +++    ++  +  A      ++S+ +  ++ TF+IL+  Y      A A      +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            + G  P+ + F+ +I+  C      +A  F  +L    +  D   Y  L+ G  + G I
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  + +EM+ + +QPN+  YS +ID LC+ G ++ A  + +++ E G   +++T+N+L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +       R ++V Q+  +M R   + D  T+N LID  CK+G++ +A  VL  M ++G 
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +        +V+ A  ++ +M     EP+ + YN+L+  +  +K  D  + 
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L KE+    + P + +Y  LI   C  G  ++  K + EM       P    Y +++  L
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-HGSAQPPDVVTYNILIDAL 415

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            + G++ +   ++  M+ +G
Sbjct: 416 CKEGRILEALGVLVMMMKKG 435



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 2/302 (0%)

Query: 229 CRKRRASEAQSFFDSLKDKFEPD-VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           CR R   +A + F+ +   F P    V+  L+    R G+   A  +F +++  GI P++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            T++I+I+          A  + A +L+ G +PN +TFN ++          K L     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           +   G   D  TY  LI+   K+G+++ A+ +L  M +    PN   ++ +   + K G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V+ A  +  ++ +     + VTYN L+    +      V +L  +M    V+P+  T+ I
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI   C  G    A + +  M+ ++  KP    Y  +++       + +  EL  +MV R
Sbjct: 271 LIDALCKEGRILEA-QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 528 GF 529
           G 
Sbjct: 330 GL 331



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 6/278 (2%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   +I+  C     +  L VL        +P  V     Y+ M++        ++A   
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT----YNAMMDGYCLRNNVNVAKDI 462

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
            + M    +E  +  +++L+  Y +  +  EA+  F  M      PD  +++ +I  LC 
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 231 KRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             R    Q   D + D  + PDVI Y  L+  +C+     +A  +FR++ + GI P+ YT
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYT 581

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
              ++D LC+  ++  A D    +L  GC PN  T+  L+    K     + + + ++M+
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
                 D IT+  +I    +  + + A K+   M+ +G
Sbjct: 642 DNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 72/158 (45%), Gaps = 1/158 (0%)

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           +C+   ++DA+   N MVR    P  S F+ +   I ++G    A  ++ +++     P+
Sbjct: 30  NCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             T+ IL+  +     T     L   + ++  +PN+ T+  +I  +C  G    A  + +
Sbjct: 90  IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            ++ +  L      Y  ++  L + GQ++    L+++M
Sbjct: 150 NLLAQGYLFD-QFTYGTLINGLSKNGQIKAALHLLQEM 186


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 203/427 (47%), Gaps = 48/427 (11%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y+ +I+   K + F  A+ F+  M   +   TV T++ +V    +A    +AV  
Sbjct: 75  PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKL 134

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-------------------- 245
            + M + GC+P+   +++++  LC +R+  EA+   + +                     
Sbjct: 135 LDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK 194

Query: 246 -DKFE------------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            D+ +            PDV+ YT ++ G C++G++  A R+   M   G  P+V TYS 
Sbjct: 195 CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSS 254

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID  C+ G++ RA  +   ML++GC PN + +N+L+    +     K   +  +M+R G
Sbjct: 255 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 314

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM----------IFRCI 402
              D ++YN  ID  CK  +++ A  V + MV +GC PNAS+++M          +   +
Sbjct: 315 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGL 374

Query: 403 SKLGDVNGAHRMYGKMKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
            K G  + A  ++ K+ D K CEP+   YN+++      +  D  L++ K+M E     N
Sbjct: 375 CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CN 433

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V T+ IL+   C     ++A   +  M++E  + P    Y  ++  + + G+     EL 
Sbjct: 434 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFI-PDFVTYGTLVDAMCKCGKSAAALELF 492

Query: 522 EKMVDRG 528
           E+ V  G
Sbjct: 493 EEAVKGG 499



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 21/397 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + H+   Y++++    +  + D A      M  ++ +    TF+IL+R   R+    +A 
Sbjct: 3   YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
               RM+E GC PD   ++ +IS   + +   +A  F  + +K+   P V+ YTN+V G 
Sbjct: 63  KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+A    +A ++  EM+  G  PN+YTY+++++ LC   ++  A  +  EM   G  P+ 
Sbjct: 123 CKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDV 182

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+N+ ++   K  R ++  +    + R+    D ++Y  +I+  CK G L+ A ++L+ 
Sbjct: 183 VTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDH 239

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM----QMFA 438
           M  +GC P+  T++ +     K G+V  A  +   M  L C PN V YN L+    ++  
Sbjct: 240 MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 299

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
             K+ DM++    EME     P+V +Y   I   C       A      M+E  C    S
Sbjct: 300 IGKAEDMLV----EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355

Query: 499 S---------VYEMVLQQLRRAGQLQKHEELVEKMVD 526
           S         +Y ++L  L + G+  +   L  K++D
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLD 392



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 148/304 (48%), Gaps = 5/304 (1%)

Query: 228 LCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           L R+ R  +A + F  + DK  +PD   +  L+RG CR+  + +A ++   MK  G  P+
Sbjct: 17  LTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPD 76

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
              Y+ +I    +     +A    AEM++  C P  +T+ N++    KA RT   +++ +
Sbjct: 77  DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLD 136

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+  GC  +  TYN +++  C++ KL++A K+L  M  +G  P+  T+N   + + K  
Sbjct: 137 EMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCD 196

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V+ A +   +M      P+ V+Y  ++     S   D   ++   M      P+V TY 
Sbjct: 197 RVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYS 253

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            LI  +C  G    A   +  M++  C +P    Y  +L  L R G + K E+++ +M  
Sbjct: 254 SLIDGFCKGGEVERAMGLLDSMLKLGC-RPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 312

Query: 527 RGFT 530
           RGFT
Sbjct: 313 RGFT 316



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 5/352 (1%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           E  V T++ L+ +  R     +A   F  M +  C PD   F+I++  LCR  +  +A+ 
Sbjct: 4   EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63

Query: 240 FFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
               +K+    PD  +Y  L+ G+ +A +  +A +   EM      P V TY+ ++D LC
Sbjct: 64  LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           +  +   A  +  EM + GC PN  T+N ++    +  + ++  ++  +M   G   D +
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 183

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TYN  I   CK  ++++A K L    R    P+  ++  +   + K GD++ A RM   M
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHM 240

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
            +  C P+ VTY+ L+  F      +  + L   M +    PN+  Y  L+     +GH 
Sbjct: 241 SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 300

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             A   + EM E +   P    Y   +  L +A +++K + + ++MV+RG T
Sbjct: 301 GKAEDMLVEM-ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCT 351



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 15/336 (4%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +IN   K    D A   +D M +R     V T+S L+  + + G    A+ 
Sbjct: 211 TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMG 270

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M + GC P+ +A++ ++  L R     +A+     ++ + F PDV+ Y   + G C
Sbjct: 271 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 330

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVI----------DALCRCGQITRAHDVFAEM 313
           +A  + +A+ VF  M   G  PN  +YS++I          D LC+ G+   A  +F+++
Sbjct: 331 KAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKV 390

Query: 314 L-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           L E  CEP+   +N ++  H K  + +K LQ++ QM    C  + +T+N L+   C D +
Sbjct: 391 LDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDR 449

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           L DA  +L +MV +G  P+  T+  +   + K G    A  ++ +     C P+ VTY+ 
Sbjct: 450 LSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSA 509

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           L+         +    L  ++ E    P+  T  +L
Sbjct: 510 LITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 180/388 (46%), Gaps = 25/388 (6%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+  I    K  + D A  F+  M    V   V +++ ++    ++G    A   
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRM 236

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
            + M   GC PD + +S +I   C+      A    DS LK    P+++ Y +L+    R
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS-- 322
            G+I +AE +  EM+  G  P+V +Y+  ID LC+  ++ +A  VF  M+E GC PN+  
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356

Query: 323 --------ITFNNLMRVHVKASRTEKVLQVYNQ-MKRLGCEADTITYNFLIDCHCKDGKL 373
                   + +  L+    K  R ++   ++++ +    CE D   YN ++D HCK  ++
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 416

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A+++   M+ K C  N  T+N++   +     ++ A  M   M D    P+ VTY  L
Sbjct: 417 DKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN---NAYKYIREMIE 490
           +        +   L+L +E  +    P+V TY  LIT   G+ H N    AY    +++E
Sbjct: 476 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT---GLVHENMAEEAYLLFTKLVE 532

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            + + P      ++ ++L+   + +K E
Sbjct: 533 RRWV-PDDKTLGLLHRKLKLLNKPRKAE 559



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 4/249 (1%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G + NV+TY+ ++  L R  +  +A  VF EM++  C+P++ TF  L+R   ++++ EK 
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            ++  +MK +GC  D   YN LI  + K      A K L  MV+  C P   T+  I   
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K      A ++  +M+D  C PN  TYN++++     +  D   K+ +EM      P+
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V TY   I   C     + A K++  M     + P    Y  V+  L ++G L     ++
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 522 EKMVDRGFT 530
           + M +RG T
Sbjct: 238 DHMSNRGCT 246



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 1/179 (0%)

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
           +G E +  TYN L+    ++ + + A  V   M+ K C P+A TF ++ R + +   +  
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A ++ G+MK++ C P+   YN L+  ++ +K      K   EM +N   P V TY  ++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             C      +A K + EM ++ C  P    Y ++++ L    +L + ++++E+M  RG+
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGC-SPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 21/364 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y +++N      + +LA+   + MK   +   V T++I+V  + +AGL  +A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
             FN M E GC P+ + ++ +I    + ++ S A   F++ L +   P+++ Y+ L+ G 
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 263 CRAGNISEAERVFREMKMAGIQ------------------PNVYTYSIVIDALCRCGQIT 304
           C+AG + +A ++F   +M G +                  PNV TY  ++D  C+  ++ 
Sbjct: 599 CKAGQVEKACQIFE--RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +   M   GCEPN I ++ L+    K  + ++  +V  +M   G  A   TY+ LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D + K  + + A KVL+ M+   C PN   +  +   + K+G  + A+++   M++  C+
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN VTY  ++  F      +  L+L + M    V PN  TYR+LI   C  G  + A+  
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836

Query: 485 IREM 488
           + EM
Sbjct: 837 LEEM 840



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 26/386 (6%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            DLA      M +  V +     S   R    AG   +A      M   G  PD   +S 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           V++ LC   +   A   F+ +K      DV  YT +V  +C+AG I +A + F EM+  G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             PNV TY+ +I A  +  +++ A+++F  ML  GC PN +T++ L+  H KA + EK  
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608

Query: 343 QVYNQMKRLGCEA--------------------DTITYNFLIDCHCKDGKLEDAIKVLNS 382
           Q++ +M    C +                    + +TY  L+D  CK  ++E+A K+L++
Sbjct: 609 QIFERM----CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M  +GC PN   ++ +   + K+G ++ A  +  +M +        TY+ L+  +   K 
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D+  K+  +M EN   PNV  Y  +I   C +G  + AYK + +M+EEK  +P    Y 
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK-LMQMMEEKGCQPNVVTYT 783

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
            ++      G+++   EL+E+M  +G
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKG 809



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 177/411 (43%), Gaps = 24/411 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y ++I+   +   F+ A  F++ M++ +    V T+S L+   +         
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
              N M   GC P    F+ ++   C     S A      + K    P  +VY  L+   
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 263 CRAGN------ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           C   +      +  AE+ + EM  AG+  N    S     LC  G+  +A  V  EM+  
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P++ T++ ++     AS+ E    ++ +MKR G  AD  TY  ++D  CK G +E A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-- 434
            K  N M   GC PN  T+  +     K   V+ A+ ++  M    C PN VTY+ L+  
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 435 -----------QMF---ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                      Q+F     SK    V    K+ ++N   PNV TY  L+  +C       
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           A K +  M  E C +P   VY+ ++  L + G+L + +E+  +M + GF A
Sbjct: 658 ARKLLDAMSMEGC-EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 181/442 (40%), Gaps = 50/442 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           V+SFF W   +  + H+  +Y+ +++L  +     +   F+  ++  + E+  +  ++LV
Sbjct: 148 VISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLV 207

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI----------------------- 227
           R++ R G  + A+    R++++   P +  ++ +I                         
Sbjct: 208 RKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLR 267

Query: 228 ------------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
                       LC+  +  EA +  ++  + F PD + YT L+ G C A    EA    
Sbjct: 268 MDGFTLRCFAYSLCKVGKWREALTLVET--ENFVPDTVFYTKLISGLCEASLFEEAMDFL 325

Query: 276 REMKMAGIQPNVYTYSIVIDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
             M+     PNV TYS +   LC C    Q+ R   V   M+  GC P+   FN+L+  +
Sbjct: 326 NRMRATSCLPNVVTYSTL---LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRK 386
             +       ++  +M + G     + YN LI   C D        L+ A K  + M+  
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N    +   RC+   G    A  +  +M      P+T TY+ ++     +   ++ 
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L +EM+   +  +V TY I++  +C  G    A K+  EM E  C  P    Y  ++ 
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC-TPNVVTYTALIH 561

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
              +A ++    EL E M+  G
Sbjct: 562 AYLKAKKVSYANELFETMLSEG 583



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 161/372 (43%), Gaps = 20/372 (5%)

Query: 141 RPEFVHSPDLYHEMINLAG-KVRQFDL---AWHFIDLMKSRNVEITVDT---------FS 187
           + + + S  L H  ++LA  ++  F L   A+    + K R     V+T         ++
Sbjct: 247 KADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYT 306

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
            L+     A L  EA+   NRM    C P+ + +S ++     K++    +   + +  +
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC------RC 300
              P   ++ +LV  +C +G+ S A ++ ++M   G  P    Y+I+I ++C       C
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
             +  A   ++EML  G   N I  ++  R    A + EK   V  +M   G   DT TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + +++  C   K+E A  +   M R G   +  T+ ++     K G +  A + + +M++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
           + C PN VTY  L+  +  +K      +L + M      PN+ TY  LI  +C  G    
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 481 AYKYIREMIEEK 492
           A +    M   K
Sbjct: 607 ACQIFERMCGSK 618



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 38/283 (13%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   KV + D A      M       T+ T+S L+ RY +      A    ++M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E  CAP+ + ++ +I  LC+  +  EA      +++K  +P+V+ YT ++ G+   G I
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-------------- 314
                +   M   G+ PN  TY ++ID  C+ G +  AH++  EM               
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 315 ----------------EVGCEPNSITFNNLMRVHV----KASRTEKVLQVYNQMKRLGCE 354
                           E+G + ++  F ++ R+ +    KA R E  L++  ++      
Sbjct: 856 IEGFNKEFIESLGLLDEIG-QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914

Query: 355 A--DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               + TYN LI+  C   K+E A ++ + M +KG  P   +F
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 106/235 (45%), Gaps = 5/235 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y EMI+   KV + D A+  + +M+ +  +  V T++ ++  +   G     +    RM
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD-VIVYTNLVRGWCRAGNI 268
              G AP+ + + ++I   C+      A +  + +K    P     Y  ++ G+ +    
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EF 863

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE--PNSITFN 326
            E+  +  E+      P +  Y ++ID L +  ++  A  +  E+          S T+N
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 923

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           +L+     A++ E   Q++++M + G   +  ++  LI    ++ K+ +A+ +L+
Sbjct: 924 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 188/387 (48%), Gaps = 11/387 (2%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F H+P     +I         D A   +D ++S   +  V T++ L+  + RA    EA+
Sbjct: 26  FTHTP-----IITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAM 77

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
                M E GC P+ + +++++  LC+      AQ     + +  F P+V+ + +LV G+
Sbjct: 78  KLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGF 137

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ GN+ +A ++   M   G++PNV TYS +ID LC+  +   A +V  EM   G  P++
Sbjct: 138 CKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDA 197

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T++ L+    KA + E+  Q+  +M   GC  D + Y+ +I   CK GKL +A K L  
Sbjct: 198 FTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 257

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL-KCEPNTVTYNILMQMFATSK 441
           M ++  +P+  T+N +   + KLG +  A  +  +M++     P+ VTY+ ++     S 
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                 KL   M +    P+V TY  +I   C  G    A   ++ M    C  P    Y
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC-APNVVTY 376

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
             ++  L +A ++ + E ++E+M + G
Sbjct: 377 TTLISGLCKARKVDEAERVMEEMRNAG 403



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 180/377 (47%), Gaps = 3/377 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K+     A   +  M        V TF+ LV  + + G   +A      M 
Sbjct: 95  YNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV 154

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + +S +I  LC+ ++  EA+   + +K     PD   Y+ L+ G C+A  I 
Sbjct: 155 AKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIE 214

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE++ R M  +G  P+V  YS +I A C+ G++  A     EM +    P+ +T+N ++
Sbjct: 215 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 274

Query: 330 RVHVKASRTEKVLQVYNQMKRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
               K  +  +   + +QM+  G    D +TY+ +I+  CK   L +A K+L+ M + GC
Sbjct: 275 DGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 334

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           NP+  T+  I   + K G +  A  +   MK   C PN VTY  L+     ++  D   +
Sbjct: 335 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 394

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQ 507
           + +EM      PN+ TY  ++   C  G    A + ++ M + +    P ++ Y  ++  
Sbjct: 395 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 454

Query: 508 LRRAGQLQKHEELVEKM 524
           L  +  +Q+ E+L+E+M
Sbjct: 455 LMSSDLVQEAEQLLEQM 471



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 160/334 (47%), Gaps = 4/334 (1%)

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIV 254
           AG    A+     M+  G APD    + +I+ +     A +     D L+    +P+V+ 
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAM---ANAGDLDGAMDHLRSMGCDPNVVT 59

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           YT L+  + RA  + EA ++  EM+  G  PN+ TY++++DALC+   +  A DV  +M+
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           E G  PN +TFN+L+    K    +   ++   M   G   + +TY+ LID  CK  K  
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +A +VL  M   G  P+A T++ +   + K   +  A +M  +M    C P+ V Y+ ++
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
             F  S       K  +EM +    P+V TY  +I   C +G    A   + +M E   +
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            P    Y  V+  L ++  L + ++L+++M   G
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 333



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 4/262 (1%)

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C AG++  A  +  EMK AG  P+ +T++ +I A+   G +  A D    M   GC+PN 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+  L+    +A + E+ +++  +M+  GC  + +TYN L+D  CK   +  A  V+  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M+  G  PN  TFN +     K G+V+ A ++ G M      PN VTY+ L+     S+ 
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                ++ +EM+ + V P+  TY  LI   C       A + +R M    C  P   VY 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC-TPDVVVYS 236

Query: 503 MVLQQLRRAGQLQKHEELVEKM 524
            ++    ++G+L + ++ +++M
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEM 258



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 4/125 (3%)

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD++ A  +  +MK     P+  T+  ++   A +   D  +   + M     +PNV TY
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNVVTY 60

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI  +        A K + EM E  C  P    Y +++  L +   +   +++V+KM+
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGC-PPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 526 DRGFT 530
           + GF 
Sbjct: 120 EGGFA 124


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 185/389 (47%), Gaps = 9/389 (2%)

Query: 146 HSPDLYHEMINLAGKV--RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P        LAG V  ++ DLA         R V   + TF+ ++    R G   +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE----PDVIVYTNLV 259
                ++ +G AP    ++ +I   C+K  A         LK+  E    P  + +  L+
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+C+  N + A RVF EMK  GI  +V TY+ +I  LC  G++     +  EM ++G  
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN ITF  +++   K           + M     E D + Y  LID + + GK+EDA+ V
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
             +M +KG +PN +T+N +    S+ GD   A  +  +MK+   E + VTYN+L+     
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                  +KL  EM E  +EPN  TY  +I  +C  G+  +AY+    M  EKC K  + 
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--EKCRKRANV 509

Query: 500 V-YEMVLQQLRRAGQLQKHEELVEKMVDR 527
           V Y + ++   + G++ +  +L+ +M+D+
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDK 538



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 175/372 (47%), Gaps = 7/372 (1%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y  + +I+   ++ Q   A      +K+  +  +V T++ L+  Y + G A    H
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 205 A---FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
                  M E G +P  + F ++I+  C+    + A   F+ +K +     V+ Y +L+ 
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C  G + E  ++  EM+  G+ PN  T+  V+   C+ G +  A+D    M E   EP
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           + + +  L+  + +  + E  + V   M + G   +  TYN LI    + G    A  +L
Sbjct: 368 DVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M  KG   +  T+N++   +   G+V  A ++  +M ++  EPN +TYN ++Q F   
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK 487

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
            +     +++  ME+     NV TY + I  +C +G  + A   + EM++ KCL P    
Sbjct: 488 GNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD-KCLVPNGIT 546

Query: 501 YEMVLQQLRRAG 512
           YE + + +   G
Sbjct: 547 YETIKEGMMEKG 558



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 154/341 (45%), Gaps = 45/341 (13%)

Query: 233 RASEAQSFFDSL------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           RAS+    +D+         +  P       L+ G   A  +  AE+ FR      + P+
Sbjct: 131 RASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPD 190

Query: 287 VYTYSIVIDALCRCGQITRAHDV------------------------------------- 309
           +YT++ VI  LCR GQ+ +A DV                                     
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250

Query: 310 -FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
              EM+E G  P ++TF  L+  + K S T   ++V+ +MK+ G  A  +TYN LI   C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            +GK+E+ +K++  M   G +PN  TF  + +   K G +  A+     M +   EP+ V
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            Y IL+  +      +  + +K+ M +  + PNV TY  LIT +   G W +A   + EM
Sbjct: 371 IYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +EK ++     Y +++  L   G+++K  +L+++M + G 
Sbjct: 431 -KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 193/419 (46%), Gaps = 38/419 (9%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  LY+  I+  GK    D+AW F   +K+  +     +++ +V    +AG   EA   
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL 303

Query: 206 FNRME-----------------------------------EYGCAPDKIAFSIVISILCR 230
           F +ME                                   E GC P  ++F+ +++ L +
Sbjct: 304 FGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGK 363

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           KR+  EA + FD +K   +P++  Y  ++   C AG ++EA ++  EM++AG+ PN+ + 
Sbjct: 364 KRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSV 423

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I++D LC+  Q+  AH +F    E GC PNS+T+ +L+    K  + +   +++ +M  
Sbjct: 424 NIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLD 483

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G +A+ I Y  LI      G+ ED  K+   M+R+G  P+ +  N    C+ K G+V  
Sbjct: 484 AGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEK 543

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              ++  MK     P+  +Y+IL+     +        + + M +     +   Y  ++ 
Sbjct: 544 GRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVD 603

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             C  G  + AY+ + EM + K + P  + Y  ++  L +  +L +   L E+   +G 
Sbjct: 604 GLCKSGKVDKAYEVLEEM-KVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 181/379 (47%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+  GK  + D A+   + M     +     ++ L+R +   G   +    +  M 
Sbjct: 458 YCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMI 517

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD    +  +  + +     + ++ F+ +K   F PDV  Y+ L+ G  +AG   
Sbjct: 518 RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQAR 577

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E   +F+ M   G   +   Y+ V+D LC+ G++ +A++V  EM      P   T+ +++
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R ++   ++ + K  G E + I Y+ LID   K G++++A  +L  M++KG  
Sbjct: 638 DGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 697

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N +   + K  +++ A   +  MK++KC PNT TY+IL+      +  +     
Sbjct: 698 PNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVF 757

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +EM++  + PNV TY  +I+    +G+  +AY  + E  +     P S+ +  +++ + 
Sbjct: 758 WQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYS-LFERFKTNGGIPDSASFNALIEGMS 816

Query: 510 RAGQLQKHEELVEKMVDRG 528
            A +  +  ++ E+   RG
Sbjct: 817 NANRPMEAYQVFEETRLRG 835



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 185/402 (46%), Gaps = 7/402 (1%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            +V+     +  RP F      Y  +I    + RQ + A   +  M+    E++V  F+ 
Sbjct: 161 FRVIGAMRHLKFRPPF----SAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTT 216

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DK 247
           LVR   R G    A+   + ++     PD + +++ I    +      A  FF  LK   
Sbjct: 217 LVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG 276

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             PD + YT++V   C+AG + EAE +F +M+     P  Y Y+ +I       +   A+
Sbjct: 277 LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAY 336

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +   + E GC P+ ++FN+++    K  + ++ L +++ MK+   + +  TYN +ID  
Sbjct: 337 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNIIIDML 395

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C  G++ +A K+ + M   G  PN  + N++   + K   +  AHR++    +  C PN+
Sbjct: 396 CMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNS 455

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VTY  L+         D   +L ++M +   + N   Y  LI  +   G   + +K  +E
Sbjct: 456 VTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKE 515

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           MI  +  +P  ++    +  + +AG+++K   + E M   GF
Sbjct: 516 MI-RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF 556



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 164/352 (46%), Gaps = 9/352 (2%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + LV   VR+    +A      M      P   A++++I  L   R+   A      ++D
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQD 204

Query: 247 -KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
             +E  V ++T LVR   R G +  A  +  E+K + ++P++  Y++ ID   + G +  
Sbjct: 205 VGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDM 264

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD---TITYNF 362
           A   F E+   G  P+ +++ +++ V  KA R  +  +++ QM+    E D      YN 
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME---AERDVPCAYAYNT 321

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           +I  +    + +DA K+L  +  +GC P+  +FN I  C+ K   V+ A  ++  MK   
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK-D 380

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            +PN  TYNI++ M   +   +   K++ EME   + PN+ +  I++   C       A+
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH 440

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           +      E  C  P S  Y  ++  L + G++     L EKM+D G  A P+
Sbjct: 441 RIFESASERGC-NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPI 491



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 9/294 (3%)

Query: 148 PDL-----YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           PDL     Y + +  AG+V +        + MKS      V ++SIL+    +AG A E 
Sbjct: 523 PDLTLLNTYMDCVFKAGEVEK---GRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARET 579

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG 261
            + F  M + G A D  A++ V+  LC+  +  +A    + +K K   P V  Y ++V G
Sbjct: 580 SNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDG 639

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             +   + EA  +F E K  GI+ NV  YS +ID   + G+I  A+ +  EM++ G  PN
Sbjct: 640 LAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 699

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+N+LM   VK    ++ L  +  MK + C  +T TY+ LI+  C+  K   A     
Sbjct: 700 VYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 759

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            M ++G  PN  T+  +   ++K+G++  A+ ++ + K     P++ ++N L++
Sbjct: 760 EMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIE 813



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 173/376 (46%), Gaps = 9/376 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ ++   GK R+ D A    D+MK ++ +  + T++I++     AG   EA    + ME
Sbjct: 354 FNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEME 412

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
             G  P+ ++ +I++  LC+  +  EA   F+S  ++   P+ + Y +L+ G  + G I 
Sbjct: 413 LAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKID 472

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+F +M  AG   N   Y+ +I      G+    H ++ EM+  G  P+    N  M
Sbjct: 473 DAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYM 532

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA   EK   ++  MK  G   D  +Y+ LI    K G+  +   +  +M ++G  
Sbjct: 533 DCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFA 592

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +A  +N +   + K G V+ A+ +  +MK     P   TY  ++   A     D    L
Sbjct: 593 LDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYML 652

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +E +   +E NV  Y  LI  +  +G  + AY  + EM+ +K L P    +  ++    
Sbjct: 653 FEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMM-KKGLTPNVYTWNSLMD--- 708

Query: 510 RAGQLQKHEELVEKMV 525
               L K EE+ E ++
Sbjct: 709 ---ALVKTEEIDEALI 721



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/382 (20%), Positives = 185/382 (48%), Gaps = 3/382 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L+  ++    +  Q + A   +D +K   +E  +  +++ +  + +AG    A   F+ +
Sbjct: 213 LFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHEL 272

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNI 268
           + +G  PD ++++ ++ +LC+  R  EA+  F  ++ + + P    Y  ++ G+  A   
Sbjct: 273 KAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERF 332

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A ++   ++  G  P+V +++ ++  L +  ++  A  +F ++++   +PN  T+N +
Sbjct: 333 DDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNII 391

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + +   A R  +  ++ ++M+  G   + ++ N ++D  CK  +LE+A ++  S   +GC
Sbjct: 392 IDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGC 451

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           NPN+ T+  +   + K G ++ A+R++ KM D   + N + Y  L++ F      +   K
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + KEM      P++      +      G      + I E ++     P    Y +++  L
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKG-RAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            +AGQ ++   + + M  +GF 
Sbjct: 571 TKAGQARETSNIFQAMSQQGFA 592



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 153/324 (47%), Gaps = 3/324 (0%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
              M   G      A + +++ L R RR  +A     +++  KF P    YT L+     
Sbjct: 129 LEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAE 188

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           A     A  + R+M+  G + +V  ++ ++ AL R GQ+  A  +  E+     EP+ + 
Sbjct: 189 ARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVL 248

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N  +    KA   +   + ++++K  G   D ++Y  ++   CK G+L +A ++   M 
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +   P A  +N +          + A+++  ++++  C P+ V++N ++      +  D
Sbjct: 309 AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 368

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L L   M+++  +PN++TY I+I M C  G  N AYK IR+ +E   L P      ++
Sbjct: 369 EALTLFDVMKKD-AKPNISTYNIIIDMLCMAGRVNEAYK-IRDEMELAGLFPNLLSVNIM 426

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           + +L +A QL++   + E   +RG
Sbjct: 427 VDRLCKANQLEEAHRIFESASERG 450



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 1/230 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA      M 
Sbjct: 633 YGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMM 692

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ ++  L +     EA   F S+K+ K  P+   Y+ L+ G CR    +
Sbjct: 693 KKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYN 752

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   ++EM+  G+ PNV TY+ +I  L + G IT A+ +F      G  P+S +FN L+
Sbjct: 753 KAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALI 812

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                A+R  +  QV+ + +  GC  +  T   L+D   K   LE A  V
Sbjct: 813 EGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIV 862



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 14/303 (4%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           S S + H + K+   R    + Q +S       +  F      Y+ +++   K  + D A
Sbjct: 562 SYSILIHGLTKAGQARETSNIFQAMS-------QQGFALDARAYNAVVDGLCKSGKVDKA 614

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           +  ++ MK ++V  TV T+  +V    +     EA   F   +  G   + I +S +I  
Sbjct: 615 YEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674

Query: 228 LCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
             +  R  EA    + + K    P+V  + +L+    +   I EA   F+ MK     PN
Sbjct: 675 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPN 734

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
            YTYSI+I+ LCR  +  +A   + EM + G  PN +T+  ++    K         ++ 
Sbjct: 735 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFE 794

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           + K  G   D+ ++N LI+      +  +A +V      +GC  N  T      CIS L 
Sbjct: 795 RFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKT------CISLLD 848

Query: 407 DVN 409
            +N
Sbjct: 849 ALN 851



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 36/204 (17%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           LY  +I+  GKV + D A+  ++ M  + +   V T++ L+   V+     EA+  F  M
Sbjct: 667 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSM 726

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
           +E  C+P+   +SI+I+ LCR ++ ++A  F+  + K    P+V+ YT ++ G  + GNI
Sbjct: 727 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNI 786

Query: 269 S-----------------------------------EAERVFREMKMAGIQPNVYTYSIV 293
           +                                   EA +VF E ++ G + NV T   +
Sbjct: 787 TDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISL 846

Query: 294 IDALCRCGQITRAHDVFAEMLEVG 317
           +DAL +   + +A  V A + E+ 
Sbjct: 847 LDALNKTECLEQAAIVGAVLSEIA 870



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 4/186 (2%)

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           EKVL+   +M  LG          L+    +  +LEDA +V+ +M      P  S + ++
Sbjct: 126 EKVLE---EMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVL 182

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              +++      A  +  +M+D+  E +   +  L++  A     +  L L  E++ + +
Sbjct: 183 IGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCL 242

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP++  Y + I  +   G  + A+K+  E+ +   L+P    Y  ++  L +AG+L + E
Sbjct: 243 EPDIVLYNVCIDCFGKAGSVDMAWKFFHEL-KAHGLRPDDVSYTSMVWVLCKAGRLGEAE 301

Query: 519 ELVEKM 524
           EL  +M
Sbjct: 302 ELFGQM 307


>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
 gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
          Length = 518

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 197/403 (48%), Gaps = 20/403 (4%)

Query: 118 KSCGVRHGIPL-LQVLS-----------FFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           + CG++    L L+VLS           FF W   +P + HS   YH MI++ GK+R+FD
Sbjct: 47  EQCGIKVSQELVLEVLSRVRNDWEAAFTFFLWAARQPGYAHSVREYHSMISILGKMRKFD 106

Query: 166 LAWHFIDLMKSRNVEITV---DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
            AW  ID M+     +++    T  I++R+Y        A++ F   + +        F 
Sbjct: 107 TAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQ 166

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR-AGNISEAERVFREMKMA 281
            ++S LCR +   +A+      K  F  +   +  ++ GWC   G+  E+ERV+REM   
Sbjct: 167 SLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSKR 226

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           GI+ +V +Y+ ++    + G + R   ++ +M ++G EP+   +N ++    K     + 
Sbjct: 227 GIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEA 286

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
             +   M+  G   + +TYN LI   C+  K+E+A    + M+++  +P   T++   R 
Sbjct: 287 FNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRI 346

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +    +V     +  KM+ + C+P   TY +L++ F   +  + V KL  EM EN + P+
Sbjct: 347 LRTGEEVFA---LLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPD 403

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
            ++Y +LI      G  + A+KY  EM +EK L P   + EM+
Sbjct: 404 RSSYIVLIHGLFLNGELDAAHKYYTEM-KEKQLLPEPKIDEML 445


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 6/339 (1%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           L+ S++ ++   ++S  +    + G  AEA+  F  MEE G APD   ++I+I+ LC+  
Sbjct: 83  LLNSQDTDVI--SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDA 140

Query: 233 RASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           +     S  D ++ + F P V+ YT L+ G+C AG +  A  +  EM+  GI PN  TY+
Sbjct: 141 QLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYT 200

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVG--CEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
            +I  LC CG++ RA  V  EM   G  C PN +T+  L+    +    E  ++  ++M 
Sbjct: 201 ALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMI 260

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             GC  +  TY  LI   C+ G   +A  +LN MV  GC  +   +N +   + K+G+++
Sbjct: 261 ISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELD 320

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  M   M +    P+  TY  L+Q    +   D  L L +EM    + PN  TY  LI
Sbjct: 321 FAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLI 380

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
             +      ++A + + EM +   L P   +Y+++ + L
Sbjct: 381 NGFTQADRTDHALQLVNEM-KSNGLMPAGDIYKILFKSL 418



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 146/309 (47%), Gaps = 5/309 (1%)

Query: 225 ISILCRKRRA--SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +++  R+RR   S  + +   L +  + DVI Y+  + G C+ G I+EA  +FREM+  G
Sbjct: 62  LAVRTRRRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKG 121

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P+ +TY+I+I+ LC+  Q+     +  EM   G  P  +T+  L+     A R +  +
Sbjct: 122 SAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAM 181

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFR 400
            + ++M+  G   +T+TY  LI   C  G++E AI VL  M  +G  C PN  T+  +  
Sbjct: 182 DILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIH 241

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + G          +M    C PN  TY  L+       S      L  EM     E 
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCEL 301

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +V  Y  LI   C MG  + A + ++ ++ EK + P    Y  ++Q L  AG L +   L
Sbjct: 302 DVVIYNSLIDGLCKMGELDFA-REMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGL 360

Query: 521 VEKMVDRGF 529
           +++M  +G 
Sbjct: 361 MQEMRAKGI 369



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 40/327 (12%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD   Y+ +IN   K  Q ++    +D M++R    TV T++ L+  +  AG    A+ 
Sbjct: 123 APDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMD 182

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK---DKFEPDVIVYTNLVRG 261
             + ME  G  P+ + ++ +I  LC       A      +K   ++  P+V+ YT L+ G
Sbjct: 183 ILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHG 242

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+ G          EM ++G  PN  TY+ +I  LC+ G    A  +  EM+ +GC   
Sbjct: 243 LCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGC--- 299

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
                                           E D + YN LID  CK G+L+ A ++  
Sbjct: 300 --------------------------------ELDVVIYNSLIDGLCKMGELDFAREMQI 327

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            MV KG  P+  T+  + + +   G ++ A  +  +M+     PN+VTY  L+  F  + 
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRIL 468
            TD  L+L  EM+ N + P  + Y+IL
Sbjct: 388 RTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 130/277 (46%), Gaps = 10/277 (3%)

Query: 132 LSFFNWVTAR---PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           +S  + + AR   P  V    L H     AG+V   D A   +D M+ R +     T++ 
Sbjct: 146 VSLMDEMQARGFSPTVVTYTTLIHGFCT-AGRV---DAAMDILDEMEHRGITPNTVTYTA 201

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYG--CAPDKIAFSIVISILCRKRRASEAQSFFDSLK- 245
           L++     G    A+     M+  G  C P+ + ++ +I  LC+K        F D +  
Sbjct: 202 LIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMII 261

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               P+   YT L+ G C+ G+  EA  +  EM   G + +V  Y+ +ID LC+ G++  
Sbjct: 262 SGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDF 321

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A ++   M+E G  P+  T+ +L++    A   ++ L +  +M+  G   +++TY  LI+
Sbjct: 322 AREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLIN 381

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
              +  + + A++++N M   G  P    + ++F+ +
Sbjct: 382 GFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 21/364 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y +++N      + +LA+   + MK   +   V T++I+V  + +AGL  +A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
             FN M E GC P+ + ++ +I    + ++ S A   F++ L +   P+++ Y+ L+ G 
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 263 CRAGNISEAERVFREMKMAGIQ------------------PNVYTYSIVIDALCRCGQIT 304
           C+AG + +A ++F   +M G +                  PNV TY  ++D  C+  ++ 
Sbjct: 599 CKAGQVEKACQIFE--RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +   M   GCEPN I ++ L+    K  + ++  +V  +M   G  A   TY+ LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D + K  + + A KVL+ M+   C PN   +  +   + K+G  + A+++   M++  C+
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN VTY  ++  F      +  L+L + M    V PN  TYR+LI   C  G  + A+  
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836

Query: 485 IREM 488
           + EM
Sbjct: 837 LEEM 840



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 26/386 (6%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            DLA      M +  V +     S   R    AG   +A      M   G  PD   +S 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           V++ LC   +   A   F+ +K      DV  YT +V  +C+AG I +A + F EM+  G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             PNV TY+ +I A  +  +++ A+++F  ML  GC PN +T++ L+  H KA + EK  
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608

Query: 343 QVYNQMKRLGCEA--------------------DTITYNFLIDCHCKDGKLEDAIKVLNS 382
           Q++ +M    C +                    + +TY  L+D  CK  ++E+A K+L++
Sbjct: 609 QIFERM----CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M  +GC PN   ++ +   + K+G ++ A  +  +M +        TY+ L+  +   K 
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D+  K+  +M EN   PNV  Y  +I   C +G  + AYK + +M+EEK  +P    Y 
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK-LMQMMEEKGCQPNVVTYT 783

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
            ++      G+++   EL+E+M  +G
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKG 809



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 177/411 (43%), Gaps = 24/411 (5%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y ++I+   +   F+ A  F++ M++ +    V T+S L+   +         
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
              N M   GC P    F+ ++   C     S A      + K    P  +VY  L+   
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 263 CRAGN------ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           C   +      +  AE+ + EM  AG+  N    S     LC  G+  +A  V  EM+  
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P++ T++ ++     AS+ E    ++ +MKR G  AD  TY  ++D  CK G +E A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-- 434
            K  N M   GC PN  T+  +     K   V+ A+ ++  M    C PN VTY+ L+  
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 435 -----------QMF---ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                      Q+F     SK    V    K+ ++N   PNV TY  L+  +C       
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           A K +  M  E C +P   VY+ ++  L + G+L + +E+  +M + GF A
Sbjct: 658 ARKLLDAMSMEGC-EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 181/442 (40%), Gaps = 50/442 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           V+SFF W   +  + H+  +Y+ +++L  +     +   F+  ++  + E+  +  ++LV
Sbjct: 148 VISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLV 207

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI----------------------- 227
           R++ R G  + A+    R++++   P +  ++ +I                         
Sbjct: 208 RKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLR 267

Query: 228 ------------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
                       LC+  +  EA +  ++  + F PD + YT L+ G C A    EA    
Sbjct: 268 MDGFTLRCFAYSLCKVGKWREALTLVET--ENFVPDTVFYTKLISGLCEASLFEEAMDFL 325

Query: 276 REMKMAGIQPNVYTYSIVIDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
             M+     PNV TYS +   LC C    Q+ R   V   M+  GC P+   FN+L+  +
Sbjct: 326 NRMRATSCLPNVVTYSTL---LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRK 386
             +       ++  +M + G     + YN LI   C D        L+ A K  + M+  
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N    +   RC+   G    A  +  +M      P+T TY+ ++     +   ++ 
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L +EM+   +  +V TY I++  +C  G    A K+  EM E  C  P    Y  ++ 
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC-TPNVVTYTALIH 561

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
              +A ++    EL E M+  G
Sbjct: 562 AYLKAKKVSYANELFETMLSEG 583



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 161/372 (43%), Gaps = 20/372 (5%)

Query: 141 RPEFVHSPDLYHEMINLAG-KVRQFDL---AWHFIDLMKSRNVEITVDT---------FS 187
           + + + S  L H  ++LA  ++  F L   A+    + K R     V+T         ++
Sbjct: 247 KADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYT 306

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
            L+     A L  EA+   NRM    C P+ + +S ++     K++    +   + +  +
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC------RC 300
              P   ++ +LV  +C +G+ S A ++ ++M   G  P    Y+I+I ++C       C
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
             +  A   ++EML  G   N I  ++  R    A + EK   V  +M   G   DT TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + +++  C   K+E A  +   M R G   +  T+ ++     K G +  A + + +M++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
           + C PN VTY  L+  +  +K      +L + M      PN+ TY  LI  +C  G    
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 481 AYKYIREMIEEK 492
           A +    M   K
Sbjct: 607 ACQIFERMCGSK 618



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 38/283 (13%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   KV + D A      M       T+ T+S L+ RY +      A    ++M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E  CAP+ + ++ +I  LC+  +  EA      +++K  +P+V+ YT ++ G+   G I
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-------------- 314
                +   M   G+ PN  TY ++ID  C+ G +  AH++  EM               
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 315 ----------------EVGCEPNSITFNNLMRVHV----KASRTEKVLQVYNQMKRLGCE 354
                           E+G + ++  F ++ R+ +    KA R E  L++  ++      
Sbjct: 856 IEGFNKEFIESLGLLDEIG-QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914

Query: 355 A--DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               + TYN LI+  C   K+E A ++ + M +KG  P   +F
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 108/242 (44%), Gaps = 5/242 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y EMI+   KV + D A+  + +M+ +  +  V T++ ++  +   G     +    RM
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD-VIVYTNLVRGWCRAGNI 268
              G AP+ + + ++I   C+      A +  + +K    P     Y  ++ G+ +    
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EF 863

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE--PNSITFN 326
            E+  +  E+      P +  Y ++ID L +  ++  A  +  E+          S T+N
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 923

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +L+     A++ E   Q++++M + G   +  ++  LI    ++ K+ +A+ +L+ +   
Sbjct: 924 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983

Query: 387 GC 388
            C
Sbjct: 984 VC 985


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 179/383 (46%), Gaps = 2/383 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S   Y  +I     +   D A   +D M ++     V T++IL+ R  R G   EA   F
Sbjct: 276 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 335

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRA 265
            +M ++G  P  I F+ +I+  C++     A      + K   +P++  Y  L+ G CR 
Sbjct: 336 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 395

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
               +A  + R +   G+ P+  TY+I++D  C+ GQ+  A ++F  M   G EP+  TF
Sbjct: 396 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 455

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             L+    K  R E+   +   M + G   D +T+  LID HCK GK +D   +  +MV 
Sbjct: 456 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 515

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
             C   A TFN     + K   +N A+ M GKM      P+ VT+ IL++    +  T +
Sbjct: 516 NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETAL 575

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            LK+ + M++    PNV TY I+I   C  G    A   +  M     + P    Y +++
Sbjct: 576 SLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM-SSFGVSPNHFTYAVLV 634

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
           +   +AG+L +  ++V  MV  G
Sbjct: 635 KAHVKAGRLDRAFQIVSTMVKNG 657



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 27/452 (5%)

Query: 103 TAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           T  S++     H+  K  G++     L V  FF WV  +  + +  D   +++ +     
Sbjct: 36  TLKSLASHMTPHLAGKIIGLQSNNVELGV-RFFKWVCRQSSYCYDLDGRIQLLGVLVSRD 94

Query: 163 QFDLAWHFI---------------------DLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
            F +A   +                     D M      ++   +S L+    +  +   
Sbjct: 95  LFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFV 154

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVR 260
           A   + RM   G     I +  V++ LC+      A+ F    L+  F  D  V T+LV 
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 261 GWCRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             CR  ++ EA RVF +M K    +PN  TYSI+I  LC  G++  A  +  EM+E GC+
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P++ T+  L++       T+K +++ ++M    C  +  TY  LID  C++GK+E+A  V
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA- 438
              M++ G  P   TFN +     K G V  A ++   M+   C+PN  TYN LM+    
Sbjct: 335 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
            SKS    L L++ ++ N + P+  TY IL+  +C  G  N A+     M     L+P  
Sbjct: 395 VSKSYKAFLLLRRVVD-NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM-NSAGLEPDG 452

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +  ++  L + G+L++   ++  MV +G +
Sbjct: 453 FTFTALIDGLCKLGRLEQANGILGSMVKKGIS 484



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 194/432 (44%), Gaps = 15/432 (3%)

Query: 105 HSISPS--TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           H + P   T   +I   C     +   Q+LS       +P      +L   +  ++   +
Sbjct: 341 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 163 QFDLAWHFID--LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
            F L    +D  L+  R       T++ILV  + + G    A + FN M   G  PD   
Sbjct: 401 AFLLLRRVVDNGLLPDRV------TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 454

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           F+ +I  LC+  R  +A     S+ K     D + +T L+ G C+ G   +   +F  M 
Sbjct: 455 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 514

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
                   +T++  +DAL +  ++  A+ +  +M++ G  P+ +T   L+  H +A  T 
Sbjct: 515 ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETA 574

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
             L++  +MK+ GC  +  TY  +I+  C +G++E+A  +L SM   G +PN  T+ ++ 
Sbjct: 575 LSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLV 634

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST--DMVLKLKKEMEENE 457
           +   K G ++ A ++   M    C+PN+  Y+ L+  F  S +      L    +++   
Sbjct: 635 KAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARS 694

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +    N    L +    +   ++A K IR+ I +KC  P   +Y  ++  L + G++ + 
Sbjct: 695 LSSEENDNNCLSSHVFRLMDVDHALK-IRDEI-KKCGVPTEDLYNFLVVGLCKEGRIIEA 752

Query: 518 EELVEKMVDRGF 529
           ++L + MV  G 
Sbjct: 753 DQLTQDMVKHGL 764



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 42/278 (15%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK +  D+ + F +++++R +  T  TF+  +    +     EA     +M +YG  P  
Sbjct: 501 GKAK--DVCFLFENMVENRCL-TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 557

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           +  +I+I   CR    + +    + +K     P+V  YT ++ G C  G + EAE +   
Sbjct: 558 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 617

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF------------ 325
           M   G+ PN +TY++++ A  + G++ RA  + + M++ GC+PNS  +            
Sbjct: 618 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 677

Query: 326 ------------------------NNLMRVHV-KASRTEKVLQVYNQMKRLGCEADTITY 360
                                   NN +  HV +    +  L++ +++K+ G   + + Y
Sbjct: 678 AIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-Y 736

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           NFL+   CK+G++ +A ++   MV+ G  P+ +  ++I
Sbjct: 737 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII 774


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 221/485 (45%), Gaps = 31/485 (6%)

Query: 53  SPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPS-----LSLGFSQISTAHSI 107
           SP ++L+++K  + +K H  +  + S+N  P    +  + S     L L F   +  H  
Sbjct: 18  SPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQF 77

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ--FD 165
                   +   C   H   +L     +       E V +  L  E  +L  K  Q  +D
Sbjct: 78  ------FTLRCKCITLH---ILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYD 128

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L +             T   F ++V+ Y R  L  +A+   +  + +G  P  ++++ V+
Sbjct: 129 LCYS------------TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL 176

Query: 226 SILCR-KRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
               R KR  S A++ F + L+ +  P+V  Y  L+RG+C AGNI  A  +F +M+  G 
Sbjct: 177 DATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGC 236

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            PNV TY+ +ID  C+  +I     +   M   G EPN I++N ++    +  R ++V  
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           V  +M R G   D +TYN LI  +CK+G    A+ +   M+R G  P+  T+  +   + 
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G++N A     +M+     PN  TY  L+  F+     +   ++ +EM +N   P+V 
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY  LI  +C  G   +A   + +M +EK L P    Y  VL    R+  + +   +  +
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475

Query: 524 MVDRG 528
           MV++G
Sbjct: 476 MVEKG 480



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 179/361 (49%), Gaps = 2/361 (0%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D+A    D M+++     V T++ L+  Y +     +       M   G  P+ I++++V
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I+ LCR+ R  E       +  + +  D + Y  L++G+C+ GN  +A  +  EM   G+
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P+V TY+ +I ++C+ G + RA +   +M   G  PN  T+  L+    +     +  +
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           V  +M   G     +TYN LI+ HC  GK+EDAI VL  M  KG +P+  +++ +     
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           +  DV+ A R+  +M +   +P+T+TY+ L+Q F   + T     L +EM    + P+  
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY  LI  YC  G    A +   EM+E+  L P    Y +++  L +  + ++ + L+ K
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVL-PDVVTYSVLINGLNKQSRTREAKRLLLK 580

Query: 524 M 524
           +
Sbjct: 581 L 581



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 22/349 (6%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           +V T++ L+    +AG    A+   ++M   G  P++  ++ ++    +K   +EA    
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             + D  F P V+ Y  L+ G C  G + +A  V  +MK  G+ P+V +YS V+   CR 
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
             +  A  V  EM+E G +P++IT+++L++   +  RT++   +Y +M R+G   D  TY
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             LI+ +C +G LE A+++ N MV KG  P+  T++++   ++K      A R+  K+  
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
            +  P+ VTY+ L+                    EN       +   LI  +C  G    
Sbjct: 584 EESVPSDVTYHTLI--------------------ENCSNIEFKSVVSLIKGFCMKGMMTE 623

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A +    M+  K  KP  + Y +++    RAG ++K   L ++MV  GF
Sbjct: 624 ADQVFESML-GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 51/286 (17%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN      + + A   ++ MK + +   V ++S ++  + R+    EA+     M 
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD I +S +I   C +RR  EA   ++  L+    PD   YT L+  +C  G++ 
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL-------------------------------- 297
           +A ++  EM   G+ P+V TYS++I+ L                                
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597

Query: 298 ------------------CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
                             C  G +T A  VF  ML    +P+   +N ++  H +A    
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           K   +Y +M + G    T+T   L+    K+GK+ +   V+  ++R
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 92/179 (51%), Gaps = 2/179 (1%)

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC-ISKLGDVNGA 411
           C + +  ++ ++  + +   ++ A+ +++     G  P   ++N +    I    +++ A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ +M + +  PN  TYNIL++ F  + + D+ L L  +ME     PNV TY  LI  
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           YC +   ++ +K +R M   K L+P    Y +V+  L R G++++   ++ +M  RG++
Sbjct: 250 YCKLRKIDDGFKLLRSM-ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 39/145 (26%)

Query: 219 IAFSIVISIL---CRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
           I F  V+S++   C K   +EA   F+S+  K  +PD   Y  ++ G CRAG+I +A  +
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAH--------------------------- 307
           ++EM  +G   +  T   ++ AL + G++   +                           
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHR 722

Query: 308 --------DVFAEMLEVGCEPNSIT 324
                   DV AEM + G  PN I+
Sbjct: 723 EGNMDVVLDVLAEMAKDGFLPNGIS 747


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 187/387 (48%), Gaps = 5/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+   K R  D A   +  M +   +    T+S ++  Y   G   EA   
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKM 357

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M++ G  P+ +  +  ++ LC+  R+ EA  FFDS+  K  +PD+  Y  L+ G+  
Sbjct: 358 FREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYAS 417

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G  ++   +F  MK  GI  N + ++I+I A  + G +  A  +F EM + G  P+ +T
Sbjct: 418 EGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ ++    +  R    ++ +NQM   G + +T  Y+ +I   C  G L  A ++++ M+
Sbjct: 478 YSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMI 537

Query: 385 RKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            KG   P+   F+ +   + K G V  AH ++    D+   P  +T+N L+  +      
Sbjct: 538 NKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKM 597

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   K+   ME   VEP++ TY  L+  Y   G  N+     REM + K +KP +  Y +
Sbjct: 598 DKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM-QRKGVKPNTVTYGI 656

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +L  L RAG+     +   +M++ G T
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTT 683



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 196/399 (49%), Gaps = 8/399 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVR 191
           FF+ +TA+    H PD++     L G   +  F       + MKS  +      F+IL+ 
Sbjct: 392 FFDSMTAKG---HKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIH 448

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEP 250
            Y + G+  +A+  F  M++ G +PD + +S VIS   R  R ++A   F+ +  +  +P
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQP 508

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRAHDV 309
           +  VY+++++G+C  G + +A+ +  EM   GI +P++  +S VI++LC+ G++  AHD+
Sbjct: 509 NTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDI 568

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F    ++G  P  ITFN+L+  +    + +K  ++ + M+ +G E D +TYN L+D + K
Sbjct: 569 FDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFK 628

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +G++ D + +   M RKG  PN  T+ ++   + + G    A + + +M +         
Sbjct: 629 NGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y I++     +   D  + L +++    V+ ++     +I     +     A K +   I
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA-KELFATI 747

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               L P  S Y +++  L + G ++    +   M   G
Sbjct: 748 SASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSG 786



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 201/409 (49%), Gaps = 17/409 (4%)

Query: 132 LSFFNWV--------TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 183
           L+ FN V         A P F      Y+ +++   + R+ DL       +    +++  
Sbjct: 137 LALFNRVCREEAGTQVAVPTFCT----YNILMDCCCRARRPDLGLALFGCILRTGLKMDQ 192

Query: 184 DTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
            T + L++    A    EAV+   +RM E GC P+ +++SIV+  LC    +  A     
Sbjct: 193 ITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQ 252

Query: 243 SLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            +  +     PDV+ Y+ ++ G+   G   +A  +F EM   G++P+V TY+++IDALC+
Sbjct: 253 MMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
              + +A  V  +M   G +P+++T++ ++  +    R ++  +++ +MK+ G   + +T
Sbjct: 313 ARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVT 372

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
            N  +   CK G+ ++A +  +SM  KG  P+  ++  +    +  G       ++  MK
Sbjct: 373 CNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMK 432

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
                 N   + IL+  +A     D  + +  EM++  V P+V TY  +I+ +  MG   
Sbjct: 433 SNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLT 492

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +A +   +M+  + ++P ++VY  ++Q     G L K +ELV +M+++G
Sbjct: 493 DAMEKFNQMV-ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG 540



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 166/348 (47%), Gaps = 5/348 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG--CAPDKIAFSIVISILCRKRRASEAQSFFD 242
           ++SI+++      ++  A+     M + G  C+PD +A+S VI     +    +A S F 
Sbjct: 230 SYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFH 289

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            + +   +PDV+ Y  ++   C+A  + +AE V R+M   G QP+  TYS +I      G
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLG 349

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A  +F EM + G  PN +T N+ +    K  R+++  + ++ M   G + D  +Y 
Sbjct: 350 RLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYC 409

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+  +  +G   D I + NSM   G   N   F ++    +K G V+ A  ++ +M+  
Sbjct: 410 TLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ 469

Query: 422 KCEPNTVTYNILMQMFA-TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              P+ VTY+ ++  F+   + TD + K   +M    ++PN   Y  +I  +C  G    
Sbjct: 470 GVSPDVVTYSTVISTFSRMGRLTDAMEKF-NQMVARGIQPNTAVYSSIIQGFCMHGGLVK 528

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A + + EMI +   +P    +  V+  L + G++    ++ +   D G
Sbjct: 529 AKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIG 576



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 176/383 (45%), Gaps = 38/383 (9%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V  +S ++  +   G   +A   F+ M   G  PD + ++++I  LC+ R   +A+    
Sbjct: 265 VVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  D  +PD + Y+ ++ G+   G + EA ++FREMK  G+ PN+ T +  + +LC+ G
Sbjct: 325 QMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHG 384

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   A + F  M   G +P+  ++  L+  +        ++ ++N MK  G  A+   + 
Sbjct: 385 RSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFT 444

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K G ++DA+ +   M ++G +P+  T++ +    S++G +  A   + +M   
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504

Query: 422 KCEPNTVTYNILMQMF----ATSKSTDMVLKL-----------------------KKEME 454
             +PNT  Y+ ++Q F       K+ ++V ++                        + M+
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564

Query: 455 ENEV---------EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            +++          P V T+  LI  YC +G  + A+K I + +E   ++P    Y  +L
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFK-ILDAMEVVGVEPDIVTYNTLL 623

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
               + G++     L  +M  +G
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKG 646



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/379 (21%), Positives = 170/379 (44%), Gaps = 5/379 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I+   ++ +   A    + M +R ++     +S +++ +   G   +A  
Sbjct: 472 SPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKE 531

Query: 205 AFNRMEEYGCA-PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGW 262
             + M   G   PD + FS VI+ LC+  R  +A   FD   D  E P VI + +L+ G+
Sbjct: 532 LVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGY 591

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G + +A ++   M++ G++P++ TY+ ++D   + G+I     +F EM   G +PN+
Sbjct: 592 CLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNT 651

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+  ++    +A RT    + +++M   G       Y  ++   C++   ++AI +   
Sbjct: 652 VTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQK 711

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +       + +  N +   + K+     A  ++  +      PN  TY +++        
Sbjct: 712 LGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGG 771

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +    +   ME++ + P       +I M    G    A  Y+ ++  ++ L   S+   
Sbjct: 772 VEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTT-S 830

Query: 503 MVLQQLRRAGQLQKHEELV 521
           ++L    R G+ Q+  +L+
Sbjct: 831 LMLSLFSRKGKYQEDIKLL 849


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 184/364 (50%), Gaps = 3/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F+  M    V   V T++ILVR     G   EAV     M   GCAP+ + ++ +++
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 227 ILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
             CR      A+     ++++   +P+++ + ++V G C+AG +  A +VF EM   G+ 
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA 255

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+V +Y+ ++   C+ G +  +  VF+EM + G  P+ +TF +L+    KA   E+ + +
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             QM+  G   + +T+  LID  CK G L+DA+  +  M + G  P+   +N +     K
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           LG ++ A  +  +M+  + +P+ VTY+ ++  +    + D   +L ++M +  V P+  T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI   C     N+A +    M++   ++P    Y  ++    + G ++K   L ++M
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLG-VQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 525 VDRG 528
           + +G
Sbjct: 495 IRKG 498



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 2/344 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           F  L+R Y      + A  A       G AP   A++ V+  L      S  +     L+
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               P+V  Y  LVR  C  G + EA  V  +M+ AG  PN  TY+ ++ A CR G++  
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205

Query: 306 AHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           A  V + M E G  +PN +TFN+++    KA R E   +V+++M R G   D ++YN L+
Sbjct: 206 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
             +CK G L +++ V + M ++G  P+  TF  +     K G++  A  +  +M++    
Sbjct: 266 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            N VT+  L+  F      D  L   +EM +  ++P+V  Y  LI  YC +G  + A + 
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           IREM E K +KP    Y  ++    + G L    +L +KM+ +G
Sbjct: 386 IREM-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 176/342 (51%), Gaps = 3/342 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCA-PDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ LV  + RAG    A    + M E G A P+ + F+ +++ LC+  R   A+  FD 
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 244 L-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + ++   PDV+ Y  L+ G+C+ G + E+  VF EM   G+ P+V T++ +I A C+ G 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + +A  + A+M E G   N +TF  L+    K    +  L    +M++ G +   + YN 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI+ +CK G+++ A +++  M  K   P+  T++ I     K+G+++ A ++  KM    
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TY+ L++     K  +   +L + M +  V+P+  TY  LI  +C  G+   A 
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               EMI +  L P    Y +++  L ++ + ++   L+ K+
Sbjct: 489 SLHDEMIRKGVL-PDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 187/387 (48%), Gaps = 24/387 (6%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +++   KV     +      M  R +   V TF+ L+    +AG   +AV 
Sbjct: 255 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 314

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
              +M E G   +++ F+ +I   C+K    +A    + ++    +P V+ Y  L+ G+C
Sbjct: 315 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 374

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G +  A  + REM+   ++P+V TYS +I   C+ G +  A  +  +ML+ G  P++I
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+++L+R   +  R     +++  M +LG + D  TY  LID HCK+G +E A+ + + M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +RKG  P+  T++++   +SK      AHR+  K+      P+ + Y+ LM   + ++  
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
            +V  LK                     +C  G    A K  + M++    K   SVY +
Sbjct: 555 SVVALLKG--------------------FCMKGLMKEADKVYQSMLDRN-WKLDGSVYSI 593

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++    R G ++K     ++M+  GF+
Sbjct: 594 LIHGHCRGGNVRKALSFHKQMLRSGFS 620



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 162/352 (46%), Gaps = 19/352 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+ + DLA   I  M+++ V+  V T+S ++  Y + G    A     +M 
Sbjct: 366 YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD I +S +I  LC ++R ++A   F++ L+   +PD   YT L+ G C+ GN+ 
Sbjct: 426 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +  EM   G+ P+V TYS++I+ L +  +   AH +  ++      P++I ++ LM
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545

Query: 330 RVHVKASRTEKVL---------------QVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
               KA     V                +VY  M     + D   Y+ LI  HC+ G + 
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A+     M+R G +PN+++   + R + + G V  A      +  L C P         
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL--LTCCPLADAEASKA 663

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            +    K      + + E+  +E  P+V  +  ++T+ C  G W+  +  +R
Sbjct: 664 LIDLNRKEGMDYFQAQGEIWYSESSPSVEYWNYMMTI-CHFGVWSTYFSMLR 714


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 180/377 (47%), Gaps = 3/377 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K+     A   +  M        V TF+ LV  + + G   +A      M 
Sbjct: 217 YNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV 276

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + +S +I  LC+ ++  EA+   + +K +   PD   Y+ L+ G C+A  I 
Sbjct: 277 AKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIE 336

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE++ R M  +G  P+V  YS +I A C+ G++  A     EM +    P+ +T+N ++
Sbjct: 337 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 396

Query: 330 RVHVKASRTEKVLQVYNQMKRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
               K  +  +   +  QM+  G    D +TY+ +I+  CK   L +A K+L+ M + GC
Sbjct: 397 DGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 456

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           NP+  T+  I   + K G +  A  +   MK   C PN VTY  L+     ++  D   +
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 516

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQ 507
           + +EM      PN+ TY  ++   C  G    A + ++ M + +    P ++ Y  ++  
Sbjct: 517 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 576

Query: 508 LRRAGQLQKHEELVEKM 524
           L  +  +Q+ E+L+E+M
Sbjct: 577 LMSSDLVQEAEQLLEQM 593



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 194/402 (48%), Gaps = 11/402 (2%)

Query: 132 LSFFNWVTAR-PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR---NVEITVDTFS 187
           L+FF W  A  P F H+   ++ ++ +  + ++   A    DL +S    + E  V +++
Sbjct: 60  LAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAG---DLFRSELLASCEPDVCSYN 116

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD- 246
           I++  +  AG    A+     M+  G APD    + +I+ +     A +     D L+  
Sbjct: 117 IVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMAN---AGDLDGAMDHLRSM 173

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             +P+V+ YT L+  + RA  + EA ++  EM+  G  PN+ TY++++DALC+   +  A
Sbjct: 174 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 233

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            DV  +M+E G  PN +TFN+L+    K    +   ++   M   G   + +TY+ LID 
Sbjct: 234 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 293

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK  K  +A +VL  M  +G  P+A T++ +   + K   +  A +M  +M    C P+
Sbjct: 294 LCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            V Y+ ++  F  S       K  +EM +    P+V TY  +I   C +G    A   + 
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILE 413

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +M E   + P    Y  V+  L ++  L + ++L+++M   G
Sbjct: 414 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 455



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 161/319 (50%), Gaps = 11/319 (3%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  V     Y  +I+   K ++F  A   ++ MK+R V     T+S L+    +A    
Sbjct: 281 RPNVVT----YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIE 336

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
           EA     RM   GC PD + +S +I   C+  +  EAQ     + K +  PDV+ Y  ++
Sbjct: 337 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 396

Query: 260 RGWCRAGNISEAERVFREMKMAG-IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
            G C+ G I+EA+ +  +M+ +G + P+V TYS VI+ LC+   +  A  +   M + GC
Sbjct: 397 DGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 456

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+ +T+  ++    K  R E+   +   MKR GC  + +TY  LI   CK  K+++A +
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 516

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD--LKCEPNTVTYNILMQM 436
           V+  M   GC PN  T+N +   +   G +  A ++  +MKD   +C P+  TY  ++  
Sbjct: 517 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 576

Query: 437 FATSKSTDMVLKLKKEMEE 455
                S+D+V + ++ +E+
Sbjct: 577 LM---SSDLVQEAEQLLEQ 592



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 4/249 (1%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G     ++++ ++  L RC +   A D+F   L   CEP+  ++N ++     A      
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L++  +MK  G   D  T+  +I      G L+ A+  L SM   GC+PN  T+  +   
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 188

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
            ++   +  A ++  +M++  C PN VTYN+L+              + K+M E    PN
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V T+  L+  +C  G+ ++A K +  M+  K ++P    Y  ++  L ++ +  + +E++
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307

Query: 522 EKMVDRGFT 530
           E+M  RG T
Sbjct: 308 EEMKTRGVT 316


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 186/417 (44%), Gaps = 35/417 (8%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD Y     + G  R  Q D+A    D M  R     V +++ L+     AG   EAV  
Sbjct: 186 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 245

Query: 206 FN-------------------------------RMEEYGCAPDKIAFSIVISILCRKRRA 234
           F                                RM+E G  P   A++ V+   CR+R+A
Sbjct: 246 FGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 305

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA+     + +K   P V+  T ++  +C+ G +S+A RV   MK+ G +PNV+TY+ +
Sbjct: 306 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 365

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           +   C  G++ +A  +  +M   G  P+++T+N L+R        E   ++   M+  G 
Sbjct: 366 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 425

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
            AD  TYN LI+  CKDG+ + A  + +S+  +G  PNA TFN +   + K G  + A +
Sbjct: 426 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 485

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
              KM    C P+T TY+  ++     K +   L    EM + +V+P+   Y I+I    
Sbjct: 486 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 545

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              ++    +   EM+   C  P    Y   ++     G+L + E ++ +M   G T
Sbjct: 546 KERNYGLVARTWGEMVSSGC-NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 601



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 193/440 (43%), Gaps = 11/440 (2%)

Query: 94  LSLGFSQISTAHSISPSTVRHVIEKSCGV------RHGIPLLQVLSFFNWVTARPEFVHS 147
           L++    +   HS+SP  +R + ++          R  +  L +  F +     P    +
Sbjct: 94  LAVALPVVLRLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTA 153

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           P  Y+ +I    +      A  ++ LM          TF+ L+  Y R      A   F+
Sbjct: 154 PT-YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFD 212

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN 267
           +M   G A D ++++ +I  LC   R  EA   F  +    +PD+ +Y  LV+G C A  
Sbjct: 213 KMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD---QPDMHMYAALVKGLCNAER 269

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
             E   + R MK  G +P+   Y+ V+D  CR  +   A ++  EM E G  P  +T   
Sbjct: 270 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTA 329

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++  + K  R    L+V   MK  GC+ +  TYN L+   C +GK+  A+ +LN M   G
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
            NP+A T+N++ R     G +  A R+   M+      +  TYN L+        TD   
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L   +E   ++PN  T+  LI   C  G  + A+K++ +M+   C  P +  Y   ++ 
Sbjct: 450 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGC-TPDTYTYSSFIEH 508

Query: 508 LRRAGQLQKHEELVEKMVDR 527
           L +    Q+    + +M+ +
Sbjct: 509 LCKMKGSQEGLSFIGEMLQK 528



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 182/387 (47%), Gaps = 9/387 (2%)

Query: 125 GIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           G+ +L+ +    W   RP    S   Y  +++   + R+   A   +  M  + +   V 
Sbjct: 273 GLLMLRRMKELGW---RP----STRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T + ++  Y + G  ++A+     M+  GC P+   ++ ++   C + +  +A +  + +
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +     PD + Y  L+RG C  G+I  A R+ R M+  G+  + YTY+ +I+ALC+ G+ 
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 445

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  +F  +   G +PN++TFN+L+    K+ + +   +   +M   GC  DT TY+  
Sbjct: 446 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 505

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK    ++ +  +  M++K   P+   + ++   + K  +     R +G+M    C
Sbjct: 506 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 565

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ VTY   M+ +      +    +  EM +N V  +   Y  L+  +  +G  ++A  
Sbjct: 566 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 625

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRR 510
            +++M     + P    Y ++L+ L R
Sbjct: 626 ILKQMTSVASV-PNQFTYFILLRHLVR 651



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 192/469 (40%), Gaps = 70/469 (14%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   VI   C        L+VL        +P       L     N  GKV +   A   
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN-EGKVHK---AMTL 381

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           ++ M++  V     T+++L+R     G    A      ME  G   D+  ++ +I+ LC+
Sbjct: 382 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 441

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             R  +A S FDSL+ +  +P+ + + +L+ G C++G    A +   +M  AG  P+ YT
Sbjct: 442 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 501

Query: 290 YSIVIDALCRC--------------------------------------GQITRAHDVFA 311
           YS  I+ LC+                                       G + R    + 
Sbjct: 502 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR---TWG 558

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM+  GC P+ +T+   MR +    R  +   V  +M + G   DT+ YN L+D H   G
Sbjct: 559 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 618

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK--------------------LGDVNGA 411
           + + A+ +L  M      PN  T+ ++ R + +                    L DV G 
Sbjct: 619 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG- 677

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++  MK  +  PN+ TY+ +++ F+    T+    L   M+E+ +  N + Y  L+T 
Sbjct: 678 --LFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTC 735

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +C    + +A+  +  MI+   + P    Y+ +L  L   GQ  K +E+
Sbjct: 736 FCKSKRYLDAWVLVCSMIQHGFI-PQLMSYQHLLSGLICEGQTDKAKEI 783



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/371 (19%), Positives = 142/371 (38%), Gaps = 53/371 (14%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K  + D+AW F++ M S        T+S  +    +   + E +     M 
Sbjct: 467 FNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 526

Query: 211 EYGCAPDKIAFSIVISILCRKRRAS-EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +    P  + ++IVI  L ++R     A+++ + +     PDV+ YT  +R +C  G ++
Sbjct: 527 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 586

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE V  EM   G+  +   Y+ ++D     GQ   A  +  +M  V   PN  T+  L+
Sbjct: 587 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 646

Query: 330 RVHVKA----------------------------------------------------SR 337
           R  V+                                                      R
Sbjct: 647 RHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGR 706

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
           TE+   + + MK      +   Y  L+ C CK  +  DA  ++ SM++ G  P   ++  
Sbjct: 707 TEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQH 766

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +   G  + A  ++   +     P+ + + +++        +D+  ++   +E   
Sbjct: 767 LLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMN 826

Query: 458 VEPNVNTYRIL 468
             P+  TY +L
Sbjct: 827 CRPSHQTYAML 837



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 82/178 (46%), Gaps = 2/178 (1%)

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
           GV   I L  V   F+ V  + EF+ +   Y  ++    +  + + A   + LMK  ++ 
Sbjct: 665 GVWKAIELTDVFGLFD-VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 723

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS-ILCRKRRASEAQS 239
           +  D ++ LV  + ++    +A      M ++G  P  +++  ++S ++C  +     + 
Sbjct: 724 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 783

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           F +S    + PD IV+  ++ G  + G+   +  +   ++    +P+  TY+++ + L
Sbjct: 784 FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 198/437 (45%), Gaps = 14/437 (3%)

Query: 98  FSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVH-----SPDLYH 152
           F ++S   S  P++V + I     + HG  L +          + E V      S   Y 
Sbjct: 186 FEKMSKEESCRPNSVTYSI-----LIHG--LCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238

Query: 153 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
            +I     +   D A   +D M ++     V T++IL+ R  R G   EA   F +M ++
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEA 271
           G  P  I F+ +I+  C++     A      + K   +P++  Y  L+ G CR     +A
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             + R +   G+ P+  TY+I++D  C+ GQ+  A ++F  M   G EP+  TF  L+  
Sbjct: 359 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K  R E+   +   M + G   D +T+  LID HCK GK +D   +  +MV   C   
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 478

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           A TFN     + K   +N A+ M GKM      P+ VT+ IL++    +  T + LK+ +
Sbjct: 479 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 538

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M++    PNV TY I+I   C  G    A   +  M     + P    Y ++++   +A
Sbjct: 539 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM-SSFGVSPNHFTYAVLVKAHVKA 597

Query: 512 GQLQKHEELVEKMVDRG 528
           G+L +  ++V  MV  G
Sbjct: 598 GRLDRAFQIVSTMVKNG 614



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 177/363 (48%), Gaps = 5/363 (1%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +D M      ++   +S L+    +  +   A   + RM   G     I +  V++ LC+
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 231 KRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM-KMAGIQPNVY 288
                 A+ F    L+  F  D  V T+LV   CR  ++ EA RVF +M K    +PN  
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TYSI+I  LC  G++  A  +  EM+E GC+P++ T+  L++       T+K +++ ++M
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 260

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
               C  +  TY  LID  C++GK+E+A  V   M++ G  P   TFN +     K G V
Sbjct: 261 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 320

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFA-TSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
             A ++   M+   C+PN  TYN LM+     SKS    L L++ + +N + P+  TY I
Sbjct: 321 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR-VVDNGLLPDRVTYNI 379

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           L+  +C  G  N A+     M     L+P    +  ++  L + G+L++   ++  MV +
Sbjct: 380 LVDGFCKEGQLNMAFNIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 438

Query: 528 GFT 530
           G +
Sbjct: 439 GIS 441



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 155/333 (46%), Gaps = 3/333 (0%)

Query: 200 AEAVHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTN 257
            EA   F +M +E  C P+ + +SI+I  LC   R  EA      + +K  +P    YT 
Sbjct: 180 GEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTV 239

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L++  C  G   +A ++  EM      PNV+TY+I+ID LCR G+I  A+ VF +ML+ G
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 299

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P  ITFN L+  + K        Q+ + M++  C+ +  TYN L++  C+  K   A 
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAF 359

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            +L  +V  G  P+  T+N++     K G +N A  ++  M     EP+  T+  L+   
Sbjct: 360 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 419

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 +    +   M +  +  +  T+  LI  +C +G   +       M+E +CL   
Sbjct: 420 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 479

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + +   L  L +  +L +   ++ KM+  G  
Sbjct: 480 HT-FNCFLDALGKDYKLNEANAMLGKMMKYGLV 511



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 194/432 (44%), Gaps = 15/432 (3%)

Query: 105 HSISPS--TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           H + P   T   +I   C     +   Q+LS       +P      +L   +  ++   +
Sbjct: 298 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 163 QFDLAWHFID--LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
            F L    +D  L+  R       T++ILV  + + G    A + FN M   G  PD   
Sbjct: 358 AFLLLRRVVDNGLLPDRV------TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 411

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           F+ +I  LC+  R  +A     S+ K     D + +T L+ G C+ G   +   +F  M 
Sbjct: 412 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 471

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
                   +T++  +DAL +  ++  A+ +  +M++ G  P+ +T   L+  H +A  T 
Sbjct: 472 ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETA 531

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
             L++  +MK+ GC  +  TY  +I+  C +G++E+A  +L SM   G +PN  T+ ++ 
Sbjct: 532 LSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLV 591

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST--DMVLKLKKEMEENE 457
           +   K G ++ A ++   M    C+PN+  Y+ L+  F  S +      L    +++   
Sbjct: 592 KAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARS 651

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +    N    L +    +   ++A K IR+ I +KC  P   +Y  ++  L + G++ + 
Sbjct: 652 LSSEENDNNCLSSHVFRLMDVDHALK-IRDEI-KKCGVPTEDLYNFLVVGLCKEGRIIEA 709

Query: 518 EELVEKMVDRGF 529
           ++L + MV  G 
Sbjct: 710 DQLTQDMVKHGL 721



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 42/278 (15%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK +  D+ + F +++++R +  T  TF+  +    +     EA     +M +YG  P  
Sbjct: 458 GKAK--DVCFLFENMVENRCL-TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 514

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           +  +I+I   CR    + +    + +K     P+V  YT ++ G C  G + EAE +   
Sbjct: 515 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 574

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF------------ 325
           M   G+ PN +TY++++ A  + G++ RA  + + M++ GC+PNS  +            
Sbjct: 575 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 634

Query: 326 ------------------------NNLMRVHV-KASRTEKVLQVYNQMKRLGCEADTITY 360
                                   NN +  HV +    +  L++ +++K+ G   + + Y
Sbjct: 635 AIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-Y 693

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           NFL+   CK+G++ +A ++   MV+ G  P+ +  ++I
Sbjct: 694 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII 731


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 189/388 (48%), Gaps = 42/388 (10%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T+S+L+    +A   ++AV     M+  GC+PD I ++I++  LC++ + + A     
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 250

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            + D    P+++ Y +L+ G CRA  +S+A  + R+M   G  PNV TY  +ID LC+ G
Sbjct: 251 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 310

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ-------------- 347
           ++  A  + A+M++ G  P+ + +N L+    KA + ++ + +  +              
Sbjct: 311 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 370

Query: 348 ---------------------MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
                                +K  GC  D I Y+ LID  CK GK+++A  +   M   
Sbjct: 371 SVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGD 430

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC+ +  T++ +   + K G V+ AH +  +M  +   P+T+TYN L++        D  
Sbjct: 431 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 490

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS-----VY 501
           ++L +EME +   P+  TY ILI   C M   ++A   + E  + +C+  G +      Y
Sbjct: 491 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLL-EQAKARCVAAGGTALDTIAY 549

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             ++  L +AG++ +  +  ++M+D G 
Sbjct: 550 SSLIDGLCKAGRVAEALDYFQEMIDNGV 577



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 182/387 (47%), Gaps = 9/387 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +++   K ++ D A   +  M+    E  V T++ L+    +      A   F  M
Sbjct: 81  IYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFD--------SLKDKFEPDVIVYTNLVRG 261
           +   C+P  + ++ ++  L R  +   A + F          + D+  P+VI Y+ L+ G
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDG 200

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+A  +S+A  +   MK  G  P+V TY+I++D LC+  ++  A +V  EML+ GC PN
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T+N+L+    +A R    L +   M   GC  + +TY  LID  CK G+++DA  +L 
Sbjct: 261 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 320

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M+ KG  P+   +NM+   + K   V+ +  +  +      +P+ VTY+ ++     S 
Sbjct: 321 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 380

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             D   +L   ++     P+V  Y  LI   C  G  + A+     M  + C       Y
Sbjct: 381 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC-DADVVTY 439

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
             ++  L +AG++ +   L+ +MV  G
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMG 466



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 187/394 (47%), Gaps = 11/394 (2%)

Query: 145 VHSPDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           +  PD+Y     L G  R  + D A    D M+S+N+   V   SIL+    +A  + +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRG 261
           +  F  M+  G   D + ++ ++S L +++R  +A +    ++D   EP+V+ Y +L+ G
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV----- 316
            C+      A+ +F  MK     P++ TY+ ++D L R G++ RA  +F EML+      
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 317 --GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
              C PN IT++ L+    KA+R  + +++   MK  GC  D ITY  L+D  CK+ K+ 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A +VL  M+  GC PN  T+N +   + +   V+ A  +   M    C PN VTY  L+
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                         +  +M +    P++  Y +LI   C     + +   +R  +    +
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG-I 362

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           KP    Y  V+  L R+ +L +   L+  +  RG
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 396



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 168/359 (46%), Gaps = 44/359 (12%)

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD   ++ ++   CR     +AQ  FD ++ K   P+V + + L+ G C+A    +A 
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 273 RVFREMKMAGI-----------------------------------QPNVYTYSIVIDAL 297
           R FR M+ +GI                                   +PNV TY+ +ID L
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM--KRLG--- 352
           C+  +  RA ++F  M  V C P+ +T+N L+    +  + E+ + ++ +M  +R     
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 353 --CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
             C  + ITY+ LID  CK  ++  A+++L SM  +GC+P+  T+ ++   + K   V  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  +  +M D  C PN VTYN L+     ++     L L ++M      PNV TY  LI 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             C +G   +A   + +MI +K   P   +Y M++  L +A Q+ +   L+ + V  G 
Sbjct: 305 GLCKVGRVKDACAMLADMI-DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 147/289 (50%), Gaps = 8/289 (2%)

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV  Y  L+RG+CR G I +A+R F EM+   + PNV+  SI+ID LC+  +   A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
            F  M   G   +++ +  L+    K  R ++ L + ++M+  GCE + +TYN LID  C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL------- 421
           K+ + + A ++   M    C+P+  T+N +   + + G +  A  ++ +M D        
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +C PN +TY++L+     +      ++L + M+     P+V TY IL+   C       A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++ +REM++  C+ P    Y  +L  L RA ++     L+  M  RG T
Sbjct: 246 WEVLREMLDAGCV-PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCT 293



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 43/366 (11%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +++   K  +   AW  +  M        + T++ L+    RA   ++A+ 
Sbjct: 223 SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALA 282

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWC 263
               M   GC P+ + +  +I  LC+  R  +A +    + DK   PD+++Y  L+ G C
Sbjct: 283 LMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLC 342

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A  + E+  + R     GI+P+V TYS VI  LCR  ++  A  +   +   GC P+ I
Sbjct: 343 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI 402

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            ++ L+    KA + ++   +Y  M   GC+AD +TY+ LID  CK G++++A  +L  M
Sbjct: 403 LYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 462

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL---------- 433
           VR G  P+  T+N + + +  L  ++ A  +  +M+   C P+ VTYNIL          
Sbjct: 463 VRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERV 522

Query: 434 ---------------------MQMFATSKSTDMVLKLKK---------EMEENEVEPNVN 463
                                +   A S   D + K  +         EM +N V P+  
Sbjct: 523 DSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHI 582

Query: 464 TYRILI 469
           TY IL+
Sbjct: 583 TYSILL 588



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 8/271 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PDL  Y+ +IN   K  Q D +   +    S  ++  V T+S ++    R+    EA  
Sbjct: 328 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 387

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
               ++  GC PD I +S +I  LC+  +  EA   ++ +  D  + DV+ Y+ L+ G C
Sbjct: 388 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLC 447

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG + EA  +   M   G  P+  TY+ +I  LC    +  A ++  EM    C P+++
Sbjct: 448 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 507

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRL-----GCEADTITYNFLIDCHCKDGKLEDAIK 378
           T+N L+    +  R +  + +  Q K       G   DTI Y+ LID  CK G++ +A+ 
Sbjct: 508 TYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALD 567

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
               M+  G  P+  T++++   + K  D++
Sbjct: 568 YFQEMIDNGVIPDHITYSILLEGLKKSKDLH 598


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 5/380 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   +  +F +A   +  M     E  V T S L+  + +     +A+   ++ME
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD + ++ +I   C+    ++A   FD + +D    D + Y +LV G C +G  S
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+ R+M M  I PNV T++ VID   + G+ + A  ++ EM     +P+  T+N+L+
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  R ++  Q+ + M   GC  D +TYN LI+  CK  ++++  K+   M ++G  
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +  T+N I +   + G  + A  ++ +M      PN  TY+IL+     +   +  L L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVL 403

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M+++E+E ++ TY I+I   C +G+  +A+   R +   K LKP    Y  ++    
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVSYTTMISGFC 462

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           R  Q  K + L  KM + G 
Sbjct: 463 RKRQWDKSDLLYRKMQEDGL 482



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 173/356 (48%), Gaps = 6/356 (1%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F  +++SR +   VD FS ++ +  ++      +  F+ ME  G   D  +++IVI+ LC
Sbjct: 57  FCKMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R  R   A S    + K  +EPDV+  ++L+ G+C+   + +A  +  +M+  G +P+V 
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ +ID  C+ G +  A ++F  M   G   +++T+N+L+     + R     ++   M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
                  + IT+  +ID   K+GK  +A+K+   M R+  +P+  T+N +   +   G V
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A +M   M    C P+ VTYN L+  F  SK  D   KL +EM +  +  +  TY  +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           I  Y   G  + A    +E+      +P    Y ++L  L    +++K   L E M
Sbjct: 356 IQGYFQAGRPDAA----QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 147/296 (49%), Gaps = 1/296 (0%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           E   F   ++ +  P ++ ++ ++    ++ N      +F  M++ GI  ++Y+Y+IVI+
Sbjct: 53  EIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN 112

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            LCRC +   A  V  +M++ G EP+ +T ++L+    + +R    + + ++M+ +G   
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D + YN +ID  CK G + DA+++ + M R G   +A T+N +   +   G  + A R+ 
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             M      PN +T+  ++ +F         +KL +EM    V+P+V TY  LI   C  
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           G  + A + +  M+ + CL P    Y  ++    ++ ++ +  +L  +M  RG   
Sbjct: 293 GRVDEAKQMLDLMVTKGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 165/354 (46%), Gaps = 37/354 (10%)

Query: 143 EFVHSPDLY--HEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           +F + PD+     +IN      R FD A   +  M+       V  ++ ++    + GL 
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190

Query: 200 AEAVHAFNRMEEYGCAPDKIAF-SIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNL 258
            +AV  F+RME  G   D + + S+V  + C  R +  A+   D +     P+VI +T +
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +  + + G  SEA +++ EM    + P+V+TY+ +I+ LC  G++  A  +   M+  GC
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH----------- 367
            P+ +T+N L+    K+ R ++  +++ +M + G   DTITYN +I  +           
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370

Query: 368 ---------------------CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
                                C + ++E A+ +  +M +     + +T+N++   + K+G
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
           +V  A  ++  +     +P+ V+Y  ++  F   +  D    L ++M+E+ + P
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 188/386 (48%), Gaps = 4/386 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ +++   K R  D A  F+  M ++ V     T++ L+  Y   G   EAV  
Sbjct: 255 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 314

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
           F  M  +   PD +  S+++  LC+  +  EA+  FD++  K + PDV  Y  ++ G+  
Sbjct: 315 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 374

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +   +F  M   GI P+ YT++++I A   CG + +A  +F EM + G +P+ +T
Sbjct: 375 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 434

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    +  + +  ++ +NQM   G   D   YN LI   C  G L  A ++++ ++
Sbjct: 435 YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 494

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G + +   F+ I   + KLG V  A  ++    ++   P+ V YN+LM  +      +
Sbjct: 495 NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKME 554

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L++   M    +EPNV  Y  L+  YC +G  +      REM+ ++ +KP + +Y ++
Sbjct: 555 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML-QRGIKPSTILYSII 613

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L  AG+    +    +M + G  
Sbjct: 614 IDGLFEAGRTVPAKMKFHEMTESGIA 639



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 234/482 (48%), Gaps = 35/482 (7%)

Query: 55  EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRH 114
           E TL  E+ H L+ +  R+         P L  D        GF     A + +PS    
Sbjct: 43  EGTLRPEEAHDLLDELQRR-------GTPVLERDLN------GFL---AALARAPS---- 82

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHF 170
               S   R G P L V + FN   +R +   V SP    Y  +++   +  + +LA  F
Sbjct: 83  ----SAACRSG-PALAV-ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAF 136

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILC 229
              +    + + +   + L+  +  A    EA+    +R  E GC PD  ++SI++  LC
Sbjct: 137 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 196

Query: 230 RKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            + ++ +A      + +      P+V+ Y  ++ G+ + G++++A  +F+EM   GI P+
Sbjct: 197 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 256

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + TY+ V+ ALC+   + +A     +M+     PN+ T+NNL+  +    + ++ ++V+ 
Sbjct: 257 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 316

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+R     D +T + L+   CK GK+++A  V ++M  KG NP+  ++N++    +  G
Sbjct: 317 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 376

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +     ++  M      P+  T+N+L++ +A     D  + +  EM ++ V+P+V TYR
Sbjct: 377 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 436

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C +G  ++A +   +MI++  + P    Y  ++Q     G L K +EL+ ++++
Sbjct: 437 TVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 495

Query: 527 RG 528
            G
Sbjct: 496 NG 497



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 209/429 (48%), Gaps = 12/429 (2%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           HSI P  V   +      ++G  + +    F+ +  + +   +PD++   I L G   + 
Sbjct: 321 HSILPDVVTLSMLMGSLCKYG-KIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATKG 376

Query: 165 DLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
            L       DLM    +     TF++L++ Y   G+  +A+  FN M ++G  PD + + 
Sbjct: 377 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 436

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            VI+ LCR  +  +A   F+ + D+   PD   Y  L++G+C  G++ +A+ +  E+   
Sbjct: 437 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 496

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+  ++  +S +I+ LC+ G++  A ++F   + VG  P+++ +N LM  +    + EK 
Sbjct: 497 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 556

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+V++ M   G E + + Y  L++ +CK G++++ + +   M+++G  P+   +++I   
Sbjct: 557 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 616

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + + G    A   + +M +     +  TYNI+++    ++  D  + L KE+    V+ N
Sbjct: 617 LFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 676

Query: 462 VNTYRILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           + T   L TM  GM         K +   I    L P    Y +++  L + G +++ E+
Sbjct: 677 IIT---LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 733

Query: 520 LVEKMVDRG 528
           +   M + G
Sbjct: 734 MFSSMQNAG 742



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 133/266 (50%), Gaps = 1/266 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   I  + +  + + +  FS ++    + G   +A + F+     G  PD + +++++ 
Sbjct: 486 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 545

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C   +  +A   FD++     EP+V+ Y  LV G+C+ G I E   +FREM   GI+P
Sbjct: 546 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKP 605

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +   YSI+ID L   G+   A   F EM E G   +  T+N ++R   K    ++ + ++
Sbjct: 606 STILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 665

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +++ +  + + IT N +ID   +  ++E+A  +  S+ R    P+  T++++   + K 
Sbjct: 666 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 725

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYN 431
           G V  A  M+  M++  CEPN+   N
Sbjct: 726 GLVEEAEDMFSSMQNAGCEPNSRLLN 751


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 219/444 (49%), Gaps = 20/444 (4%)

Query: 102 STAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           S+  S+SPS  +    +        P  +   FFNW  +R  F H    Y  M+++ G+ 
Sbjct: 16  SSLFSLSPSISKTTFFQVLRFIASPP--KAFEFFNW-ASRNGFAHDSRSYFMMLDILGRN 72

Query: 162 RQFDLAWHFIDLMKSRN---VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
              ++A +F+  ++ R+   V+I     + L+R Y  AGL  EA+  F+ M+  G +P  
Sbjct: 73  GNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSV 132

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFR 276
           I F+ ++ IL ++ R + A S FD +   +   PD   +  L+RG+C+   + E  R F+
Sbjct: 133 ITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFK 192

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE--VGCEPNSITFNNLMRVHVK 334
           EM     +P+V TY+ ++D LCR G++  AH+V   M++      P+ +T+  L+R +  
Sbjct: 193 EMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCM 252

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV-RKGCNPNAS 393
               ++ L V+ +M   G + + ITYN LI   C+  K +   ++L   V  +G  P+  
Sbjct: 253 KQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTC 312

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT----SKSTDMVLKL 449
           T+N +       G+ + A +M+ KMK+LK +P++ TY++L++         ++  +  KL
Sbjct: 313 TYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKL 372

Query: 450 KKE---MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             E   + ++   P V  Y  +    C  G  + A +  R+++++    P S  Y+ ++ 
Sbjct: 373 SDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPS--YKTLII 430

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
              + G  +   +L+  M+ R + 
Sbjct: 431 GHCKEGTFEAGYKLLLFMLRRDYV 454



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 186/400 (46%), Gaps = 44/400 (11%)

Query: 98  FSQISTAHSISPSTVRHVIE-----KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYH 152
           F ++   + ++P T    I      K+  V  G    + +S FN     P+ V    L  
Sbjct: 155 FDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFN---CEPDVVTYNTLVD 211

Query: 153 EMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            +   AGKVR   +A + +  M  K +++   V T++ LVR Y       EA+  F  M 
Sbjct: 212 GLCR-AGKVR---IAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMV 267

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD---------KFEPDVIVYTNLVRG 261
             G  P+ I ++ +I  LC  ++       FD +K+          F PD   Y  L+  
Sbjct: 268 SRGLKPNDITYNTLIKGLCEVQK-------FDKIKEILGGAVGGRGFVPDTCTYNTLMNA 320

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV----- 316
            C AGN  EA ++F++MK   +QP+  TYS++I  LC+ G   RA  +F ++ +      
Sbjct: 321 QCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLR 380

Query: 317 --GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             GC P    +N +     K  +T K  +V+ Q+ + G + D  +Y  LI  HCK+G  E
Sbjct: 381 DDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFE 439

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT-VTYNIL 433
              K+L  M+R+   P+  T+ ++     + G+   A++   +M      P T V ++IL
Sbjct: 440 AGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSIL 499

Query: 434 MQM----FATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            ++    FA   ++ +VL + +++ +N +  + +T R+L 
Sbjct: 500 SELLKNDFARESASFVVLMIDRKIRQN-INLSTHTMRLLF 538



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 121/301 (40%), Gaps = 39/301 (12%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y+ ++N       FD A      MK   V+    T+S+L+R   + G    A 
Sbjct: 307 FVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAE 366

Query: 204 HAFNRMEEY-------GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYT 256
             F+++ +        GC P   A++ +   LC+  +  +A+  F  L  K   D   Y 
Sbjct: 367 QLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYK 426

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L+ G C+ G      ++   M      P+  TY ++I+   + G+   A+     ML+ 
Sbjct: 427 TLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKS 486

Query: 317 GCEPNSITFNNLMRVHVK-----ASRTEKVLQVYNQMKR-LGCEADTITYNF-------- 362
              P +  F++++   +K      S +  VL +  ++++ +     T+   F        
Sbjct: 487 SYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKA 546

Query: 363 ------------------LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
                             LI   C++GKL DA K+L+  + KG N + +  N++   + K
Sbjct: 547 FQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCK 606

Query: 405 L 405
           +
Sbjct: 607 M 607


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 173/349 (49%), Gaps = 4/349 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ ++  +   G    A+     M E G  AP++  +  VIS  C+  R  EA   FD 
Sbjct: 147 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 206

Query: 244 L--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +  K + +P+ ++Y  L+ G+C  G +  A      M   G+   V TY++++ AL   G
Sbjct: 207 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 266

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A+++  EM   G  P+  T+N L+  H K    +K L+++  M R G  A  +TY 
Sbjct: 267 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 326

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI    K G++++  K+ +  VR+G  P+   +N +    S  G+++ A  + G+M+  
Sbjct: 327 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P+ VTYN LM+        D   KL  EM E  ++P++ TY  LI+ Y   G   +A
Sbjct: 387 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 446

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +   EM+  K   P    Y  ++Q L + GQ    E +V++MV+ G T
Sbjct: 447 LRIRNEMM-NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 494



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 2/321 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +I+   KV + D A    D M ++  V+     ++ L+  Y   G    A+   +RM
Sbjct: 184 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 243

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E G A     +++++  L    R +EA    + +  K   PDV  Y  L+ G C+ GN+
Sbjct: 244 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 303

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A  +F  M   G++  V TY+ +I AL + GQ+     +F E +  G  P+ + +N L
Sbjct: 304 KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 363

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  H  +   ++  ++  +M++     D +TYN L+   C  G++++A K+++ M  +G 
Sbjct: 364 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 423

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +    S  GDV  A R+  +M +    P  +TYN L+Q    +   D    
Sbjct: 424 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 483

Query: 449 LKKEMEENEVEPNVNTYRILI 469
           + KEM EN + P+ +TY  LI
Sbjct: 484 MVKEMVENGITPDDSTYISLI 504



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 153/311 (49%), Gaps = 1/311 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + +  F+ +  + E      +Y+ +I       + D A  + D M  R V +TV T+++L
Sbjct: 199 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 258

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           V      G   EA      M   G APD   ++I+I+  C++    +A   F+++  +  
Sbjct: 259 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 318

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
              V+ YT L+    + G + E +++F E    GI+P++  Y+ +I++    G I RA +
Sbjct: 319 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 378

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM +    P+ +T+N LMR      R ++  ++ ++M   G + D +TYN LI  + 
Sbjct: 379 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 438

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G ++DA+++ N M+ KG NP   T+N + + + K G  + A  M  +M +    P+  
Sbjct: 439 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 498

Query: 429 TYNILMQMFAT 439
           TY  L++   T
Sbjct: 499 TYISLIEGLTT 509



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 42/327 (12%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D  + +       +  ++R  C AG  + A  + R+M     +PN  TY+ VI   C 
Sbjct: 102 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCS 157

Query: 300 CGQITRAHDVFAEMLE-VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADT 357
            G++  A D+  EM E  G  PN  T+  ++    K  R ++ ++V+++M   G  + + 
Sbjct: 158 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 217

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + YN LI  +C  GKL+ A+   + MV +G     +T+N++   +   G    A+ +  +
Sbjct: 218 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 277

Query: 418 MKDLKCEPNTVTYNILMQ---------------------------------MFATSKSTD 444
           M      P+  TYNIL+                                  ++A SK   
Sbjct: 278 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 337

Query: 445 M--VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           +    KL  E     + P++  Y  LI  +   G+ + A++ + EM E+K + P    Y 
Sbjct: 338 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYN 396

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++ L   G++ +  +L+++M +RG 
Sbjct: 397 TLMRGLCLLGRVDEARKLIDEMTERGI 423



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 7/228 (3%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +FA+M  +     + TFN ++R    A +  + L++  QM R     + +TYN +I 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 366 CHCKDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKC 423
             C  G+++ A+ ++  M  R G  PN  T+  +     K+G V+ A +++ +M    + 
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P  V YN L+  +      D  L  +  M E  V   V TY +L+      G    AY+
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + EM   K L P    Y +++    + G ++K  E+ E M  RG  A
Sbjct: 274 LVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 320


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 186/401 (46%), Gaps = 10/401 (2%)

Query: 138 VTARPEFVH------SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           V AR  FV       SPD+  Y+ +I+  GK  + +     +  M+       V T++ L
Sbjct: 216 VEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNAL 275

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           +  + + G   +A   F  M+  G   + +  S  +   C++    EA   F  ++ +  
Sbjct: 276 INCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGM 335

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P+   YT+LV G C+AG + +A  +  EM   G+ PNV TY++++D LC+ G++  A D
Sbjct: 336 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADD 395

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V + M   G + N + +  L+  H     +E+ L + N+MK  G E D   Y  LI   C
Sbjct: 396 VLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLC 455

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  KL++A  +L+ M   G  PN   +  I     K G  + A  +  K+ D   +PN V
Sbjct: 456 KVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVV 515

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY  L+     + S    +    +M E  ++PNV  Y  LI  +C +G  + A   + EM
Sbjct: 516 TYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEM 575

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + +K +     VY  ++    + G LQ    L  KM++ G 
Sbjct: 576 V-DKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL 615



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 2/358 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK+      V T++ L+  Y + G   E     + M + GCA D + ++ +I+   +   
Sbjct: 225 MKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGW 284

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A S+F  +K      +V+  +  V  +C+ G + EA ++F +M++ G+ PN +TY+ 
Sbjct: 285 IEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTS 344

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++D  C+ G++  A  +  EM+  G  PN +T+  ++    K  +      V + M+R G
Sbjct: 345 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAG 404

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            +A+ + Y  LI  H  +   E A+ +LN M  KG   + S +  +   + K+  ++ A 
Sbjct: 405 VKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAK 464

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +  KM D    PNTV Y  +M  F  +      + L  ++ ++ ++PNV TY  LI   
Sbjct: 465 SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGL 524

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           C  G    A  +  +M  E  L P   VY  ++    + G L K   L+ +MVD+G +
Sbjct: 525 CKAGSIYEAISHFDKM-RELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMS 581



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 186/427 (43%), Gaps = 48/427 (11%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI------TVDTFSILVRRYVRAG 197
           F HS  L   ++   G   +  LA   +D++    + +          F  L+      G
Sbjct: 91  FAHSRRLLSRLL---GAGHRPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHG 147

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTN 257
           L  +AV A  R+ +    P+    + ++  L R R+    +  F+ L     P+V  +  
Sbjct: 148 LLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP---APNVFTFNI 204

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++   C+ G + EA  +F  MK  G  P+V TY+ +ID   +CG++     + +EM + G
Sbjct: 205 VIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSG 264

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI------------------- 358
           C  + +T+N L+    K    EK    + +MKRLG  A+ +                   
Sbjct: 265 CAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAM 324

Query: 359 ----------------TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
                           TY  L+D  CK G+L+DAI +L+ MV +G  PN  T+ ++   +
Sbjct: 325 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 384

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            K G V  A  +   M+    + N + Y  L+     +K+++  L L  EM+   +E +V
Sbjct: 385 CKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDV 444

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           + Y  LI   C +   + A   + +M ++  L+P + +Y  ++    +AG+  +   L+ 
Sbjct: 445 SLYGTLIWGLCKVQKLDEAKSLLHKM-DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLH 503

Query: 523 KMVDRGF 529
           K+ D G 
Sbjct: 504 KIPDSGL 510



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 175/410 (42%), Gaps = 37/410 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K    + A+ +   MK   V   V T S  V  + + GL  EA+  F +M 
Sbjct: 272 YNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMR 331

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P++  ++ ++   C+  R  +A    D +      P+V+ YT +V G C+ G ++
Sbjct: 332 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 391

Query: 270 EAERVFREMKMAGIQPN--VYT---------------------------------YSIVI 294
            A+ V   M+ AG++ N  +YT                                 Y  +I
Sbjct: 392 VADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLI 451

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
             LC+  ++  A  +  +M + G  PN++ +  +M    KA +  + + + +++   G +
Sbjct: 452 WGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQ 511

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            + +TY  LID  CK G + +AI   + M   G +PN   +  +     K+G ++ A  +
Sbjct: 512 PNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHL 571

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +M D     + V Y  L+              LK +M E  ++ ++  Y   I+ +C 
Sbjct: 572 MNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCN 631

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           M     A   + EMI    + P  + Y  ++++ ++ G +++   L  +M
Sbjct: 632 MNMMQEARGVLSEMIGTG-ITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   ++ MK++ +E+ V  +  L+    +     EA    ++M++ G  P+ + ++ ++ 
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              +  + SEA +    + D   +P+V+ Y  L+ G C+AG+I EA   F +M+  G+ P
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV  Y+ +ID  C+ G +++A  +  EM++ G   + + + +L+  H+K    +    + 
Sbjct: 548 NVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALK 607

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M   G + D   Y   I   C    +++A  VL+ M+  G  P+ + +N + R   KL
Sbjct: 608 AKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKL 667

Query: 406 GDVNGAHRMYGKMKDL 421
           G++  A  +  +M+ +
Sbjct: 668 GNMEEASSLQNEMESV 683



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 136/305 (44%), Gaps = 1/305 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  M++   K  +  +A   + LM+   V+     ++ L+  +     +  A+   N M+
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G   D   +  +I  LC+ ++  EA+S    + D    P+ ++YT ++  + +AG  S
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  ++  +G+QPNV TY  +ID LC+ G I  A   F +M E+G +PN   +  L+
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K     K + + N+M   G   D + Y  LID H K G L+ A  +   M+  G  
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   +         +  +  A  +  +M      P+   YN L++ +    + +    L
Sbjct: 617 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676

Query: 450 KKEME 454
           + EME
Sbjct: 677 QNEME 681


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 189/385 (49%), Gaps = 4/385 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P++Y  H +IN    + +   A+  +  +     +    TF+ L+R     G   EA+H 
Sbjct: 94  PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHL 153

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F++M   G  PD + +  +I+ LC+    S A     S+  K  +P+V  Y  ++   C+
Sbjct: 154 FDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK 213

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              ++EA  +F EM   GI P+++TY+ +I ALC   +      +  EM++    P+ ++
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN ++    K  +  +   V ++M + G E + +TY  L+D HC   ++++A+KV ++MV
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KGC PN  ++N +     K+  ++ A  ++G+M   +  P+TVTY+ L+      +   
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             + L  EM      PN+ TYRIL+   C   +   A   ++  IE   L P   V  + 
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA-IEGSNLDPDIQVNNIA 452

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           +  + RAG+L+   +L   +  +G 
Sbjct: 453 IDGMCRAGELEAARDLFSNLSSKGL 477



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 183/392 (46%), Gaps = 6/392 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP+ V     Y  +IN   KV     A   +  M  +N +  V  ++ ++    +     
Sbjct: 163 RPDVV----TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
           EA + F+ M   G +PD   ++ +I  LC         +  + + D K  PDV+ +  +V
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
              C+ G ++EA  V  +M   G++PNV TY+ ++D  C   ++  A  VF  M+  GC 
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN I++N L+  + K  R +K + ++ +M R     DT+TY+ LI   C   +L+DAI +
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + MV     PN  T+ ++   + K   +  A  +   ++    +P+    NI +     
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 458

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +   +    L   +    ++P+V TY I+I   C  G  + A K  REM E  C   G  
Sbjct: 459 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG-C 517

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           +Y  + +   R  +  +  +L+++MV RGF+A
Sbjct: 518 IYNTITRGFLRNNETSRAIQLLQEMVARGFSA 549



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 1/290 (0%)

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           SF   L+ +  P  + +  L+    +  + S    +  +M   GI PN+YT  I+I++ C
Sbjct: 48  SFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFC 107

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
              ++  A  V A++L++G +P++ TF  L+R      +  + L ++++M   G   D +
Sbjct: 108 HLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVV 167

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  LI+  CK G    AI++L SMV+K C PN   +N I   + K   V  A  ++ +M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
                 P+  TYN L+           V  L  EM ++++ P+V ++  ++   C  G  
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             A+  + +MI ++ ++P    Y  ++       ++ +  ++ + MV +G
Sbjct: 288 TEAHDVVDKMI-QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 166/364 (45%), Gaps = 3/364 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           QV   FN  +       SPD+  Y+ +I+    + ++      ++ M    +   V +F+
Sbjct: 216 QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 275

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            +V    + G   EA    ++M + G  P+ + ++ ++   C      EA   FD++  K
Sbjct: 276 TVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK 335

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P+VI Y  L+ G+C+   I +A  +F EM    + P+  TYS +I  LC   ++  A
Sbjct: 336 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 395

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM+     PN +T+  L+    K     + + +   ++    + D    N  ID 
Sbjct: 396 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 455

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+LE A  + +++  KG  P+  T++++   + + G ++ A +++ +M +  C  N
Sbjct: 456 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 515

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
              YN + + F  +  T   ++L +EM       + +T  + + M    G   +  + +R
Sbjct: 516 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 575

Query: 487 EMIE 490
           E ++
Sbjct: 576 EFVQ 579



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 1/220 (0%)

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +ML +     S++ N      +  +  +  +  +N+M R+     T+ +N L+    K 
Sbjct: 15  TQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM 74

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
                 + + + M   G  PN  T +++      L  V  A  +  K+  L  +P+T T+
Sbjct: 75  KHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATF 134

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             L++           L L  +M      P+V TY  LI   C +G+ + A + +  M++
Sbjct: 135 TTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 194

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           + C +P    Y  ++  L +  Q+ +   L  +MV +G +
Sbjct: 195 KNC-QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 195/387 (50%), Gaps = 2/387 (0%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           A   F     +Y+ +I    K R+   A   + +M +   + +V T++ L+    ++G  
Sbjct: 2   ASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDL 61

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNL 258
             A     +M + GCAP+ + ++ +I  LC+ RR  +A Q+    L+   EPD++ Y +L
Sbjct: 62  DAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSL 121

Query: 259 VRGWCRAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           + G C A  + +A  V +E+ + +G  P+V TY+  I  LC+ G++ +  ++  EM   G
Sbjct: 122 IHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGG 181

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P+ +TF +++    KA+R +   QV+  M   GC  D++TY+ ++D   +  +L+   
Sbjct: 182 ISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVE 241

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           +VL  MV+ G    ++T+  +   + + GD+  A   Y +  +  C     T+N  +   
Sbjct: 242 EVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGAL 301

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             S    +   +   M E+   PN+ +Y  +I   C  G+ ++A+K  R+M++  C KP 
Sbjct: 302 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 361

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKM 524
              +  ++    +AG+L + ++L+++M
Sbjct: 362 VIFFNTLISGFCKAGRLSQAQQLLKEM 388



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 159/349 (45%), Gaps = 38/349 (10%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D   ++ +I+ LC+ R+   A      +  + ++  V+ YT L+ G C++G++  A+ + 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           ++M  AG  PNV TY+ +ID LC+  +   A      ML  GCEP+ +T+N+L+     A
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 336 SRTEKVLQVYNQ-MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           +R +    V  + M   G   D +TYN  I   CK GKL+  +++L  M R G +P+  T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM- 453
           F  I   + K   ++ A +++  M +  C P+++TY+I++   + +   D V ++ + M 
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 454 ------------------------------EENEVEPN----VNTYRILITMYCGMGHWN 479
                                          E  +E      V T+   I   C  G + 
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            A   +  MIE   L P    Y  V+  L ++G +    +L  KM+D G
Sbjct: 309 LAKNILLGMIESGSL-PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 356



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 157/403 (38%), Gaps = 84/403 (20%)

Query: 123 RHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT 182
           RH + LL V+       A   +  S   Y  +I+   K    D A   +  M        
Sbjct: 27  RHALELLHVM-------AANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPN 79

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ L+    +A    +A+    RM   GC PD + ++ +I  LC   R  +A     
Sbjct: 80  VVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQ 139

Query: 243 SL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            L  +    PDV+ Y   + G C+AG + +   +  EM   GI P+V T+  +I  LC+ 
Sbjct: 140 ELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKA 199

Query: 301 GQITRAHDVFAEMLEVGCEPNSITF----NNLMRVH------------------------ 332
            +I  A  VF  MLE GC P+S+T+    +NL R +                        
Sbjct: 200 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATY 259

Query: 333 -------VKASRTEKVLQVYNQMKRLGCEADTIT-------------------------- 359
                  ++A   E     Y Q    GC  +  T                          
Sbjct: 260 APLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIE 319

Query: 360 ---------YNFLIDCHCKDGKLEDAIKVLNSMVRKGC-NPNASTFNMIFRCISKLGDVN 409
                    YNF+ID  CK G ++DA K+   M+  GC  P+   FN +     K G ++
Sbjct: 320 SGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLS 379

Query: 410 GAHRMYGKMKDLK-CEPNTVTYNILM---QMFATSKSTDMVLK 448
            A ++  +MK    C P+ VTYN ++     F + K   ++L+
Sbjct: 380 QAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLE 422



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 10/286 (3%)

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           F  D  +Y  L+ G C+A     A  +   M   G   +V TY+ +ID LC+ G +  A 
Sbjct: 6   FRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQ 65

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +  +M + GC PN +T+  L+    KA R    +Q   +M R GCE D +TYN LI   
Sbjct: 66  ALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGL 125

Query: 368 CKDGKLEDAIKVLNS-MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           C   +++DA  VL   M+  G  P+  T+N     + K G ++    M  +M      P+
Sbjct: 126 CMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPD 185

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VT+  ++     +   D   ++ K M E    P+  TY I++          N    + 
Sbjct: 186 VVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNL----SRANRLDTVE 241

Query: 487 EMIEEKCLKPG----SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           E++E   +K G    S+ Y  ++  L RAG ++      E+ ++ G
Sbjct: 242 EVLEHM-VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAG 286



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 40/280 (14%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+  I+   K  + D     ++ M    +   V TF  ++    +A    +A   
Sbjct: 149 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQV 208

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD--------SLKDKFEP------- 250
           F  M E GC PD + +SI++  L R  R    +   +        +L   + P       
Sbjct: 209 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIR 268

Query: 251 ---------------------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                                +V  +   +   CR+G    A+ +   M  +G  PN+ +
Sbjct: 269 AGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLS 328

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGC-EPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           Y+ VID LC+ G +  A  +  +ML+ GC +P+ I FN L+    KA R  +  Q+  +M
Sbjct: 329 YNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEM 388

Query: 349 KRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           K    C  D +TYN +ID   K G L+ A  +L  M   G
Sbjct: 389 KAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 181/377 (48%), Gaps = 2/377 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K   +  A   +D M+++  E  + T+++L+      G   EA++  + + 
Sbjct: 289 YSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLP 348

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            +GC PD + ++ V+  LC   R  E +     +  +   PD + +  +V   C+ G + 
Sbjct: 349 SHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVD 408

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  V   M   G   ++ TYS ++D LC  G++  A ++ + +   GC+P++I +  ++
Sbjct: 409 RAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVL 468

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +      + E+  ++  +M    C  D +T+N ++   C+ G ++ AI+V+  M   GC+
Sbjct: 469 KGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCS 528

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N I   +     ++ A  +   ++   C+P+ VT+N L++        +   +L
Sbjct: 529 PDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQL 588

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M  +   P+  T+  +IT  C  G    A + ++ M E  C+ P SS Y +V+  L 
Sbjct: 589 MANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCV-PNSSTYSIVVDALL 647

Query: 510 RAGQLQKHEELVEKMVD 526
           +AG+ Q   EL+  M +
Sbjct: 648 KAGKAQAALELLSGMTN 664



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 190/416 (45%), Gaps = 44/416 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI--LVRRYVRAGLAAEAVHAFNR 208
           Y+ M+N   +  + + A   I+ M         DTF+   L+R     G   +A+  F+ 
Sbjct: 222 YNTMVNGYCRAGRIEDARRLINGMP-----FPPDTFTFNPLIRALCVRGRIPDALAVFDD 276

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
           M   GC+P  + +SI++   C++    +A +  D ++ K  EPD++ Y  L+   C  G+
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA  +   +   G +P+  TY+ V+ +LC   +     ++ AEM    C P+ +TFN 
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++    +    ++ ++V + M   GC AD +TY+ ++D  C  G+++DA+++L+ +   G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 388 CNPNA-----------------------------------STFNMIFRCISKLGDVNGAH 412
           C P+                                     TFN +   + + G V+ A 
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           R+  +M +  C P+ VTYN ++         D  ++L  +++    +P++ T+  L+   
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           CG+  W +A + +  M+   C  P    +  V+  L + G L +  E ++ M + G
Sbjct: 577 CGVDRWEDAEQLMANMMRSNC-PPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 195/428 (45%), Gaps = 16/428 (3%)

Query: 108 SPSTVRH--VIEKSC---GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           SPS V +  +++ +C   G R  + LL  +         P+ V     Y+ +IN      
Sbjct: 283 SPSVVTYSILLDATCKESGYRQAMALLDEMRAKG---CEPDIVT----YNVLINAMCNEG 335

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
             D A + +  + S   +    T++ +++    +    E       M    CAPD++ F+
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFN 395

Query: 223 IVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +++ LC++     A    D + +     D++ Y++++ G C  G + +A  +   +K  
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G +P+   Y+ V+  LC   Q  RA ++ AEML   C P+ +TFN ++    +    ++ 
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           ++V  QM   GC  D +TYN +ID  C +  ++DA+++L+ +   GC P+  TFN + + 
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +  +     A ++   M    C P+ +T+N ++            ++  K M EN   PN
Sbjct: 576 LCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPN 635

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
            +TY I++      G    A + +  M       P    Y  V+  L +AG++++  +L+
Sbjct: 636 SSTYSIVVDALLKAGKAQAALELLSGMTNG---TPDLITYNTVISNLTKAGKMEEALDLL 692

Query: 522 EKMVDRGF 529
             MV  G 
Sbjct: 693 RVMVSNGL 700



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 196/467 (41%), Gaps = 41/467 (8%)

Query: 104 AHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           +H   P  V +  V++  CG      + ++L+        P+ V     ++ ++    + 
Sbjct: 349 SHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVT----FNTIVTSLCQQ 404

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
              D A   +D M        + T+S ++      G   +AV   +R++ YGC PD IA+
Sbjct: 405 GLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY 464

Query: 222 SIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + V+  LC   +   A+    + L     PD + +  +V   C+ G +  A RV  +M  
Sbjct: 465 TTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSE 524

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P++ TY+ +ID LC    I  A ++ +++   GC+P+ +TFN L++      R E 
Sbjct: 525 NGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWED 584

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
             Q+   M R  C  D +T+N +I   C+ G L  AI+ L  M   GC PN+ST++++  
Sbjct: 585 AEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVD 644

Query: 401 CISKLGDVNGAHRMYGKM------------------KDLKCE---------------PNT 427
            + K G    A  +   M                  K  K E               P+T
Sbjct: 645 ALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDT 704

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TY  L         TD  +++ + +++  + P+   Y  ++  +C     + A      
Sbjct: 705 TTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAH 764

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           M+   C+ P  S Y ++L+ L   G L + + L+  +   G   + L
Sbjct: 765 MVSSGCM-PDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKL 810



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 167/369 (45%), Gaps = 10/369 (2%)

Query: 163 QFDLAWHFIDLMKS---RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           + D A    D M S   RN    V   +IL++R    G  ++A   F  +   G +   +
Sbjct: 165 EIDEALVLFDSMASGGGRNCPPVVPC-NILIKRLCSDGRVSDAERVFAAL---GPSATVV 220

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
            ++ +++  CR  R  +A+   + +   F PD   +  L+R  C  G I +A  VF +M 
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGMP--FPPDTFTFNPLIRALCVRGRIPDALAVFDDML 278

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G  P+V TYSI++DA C+     +A  +  EM   GCEP+ +T+N L+         +
Sbjct: 279 HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 338

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           + L + + +   GC+ D +TY  ++   C   + ++  ++L  M    C P+  TFN I 
Sbjct: 339 EALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + + G V+ A  +   M +  C  + VTY+ ++         D  ++L   ++    +
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 458

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+   Y  ++   C    W  A + + EM+   C  P    +  V+  L + G + +   
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDC-PPDEVTFNTVVASLCQKGLVDRAIR 517

Query: 520 LVEKMVDRG 528
           +VE+M + G
Sbjct: 518 VVEQMSENG 526



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 154/330 (46%), Gaps = 33/330 (10%)

Query: 228 LCRKRRASEAQSFFDSLKD---KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG-- 282
           L ++    EA   FDS+     +  P V+    L++  C  G +S+AERVF  +  +   
Sbjct: 160 LVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSATV 219

Query: 283 ---------------------------IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
                                        P+ +T++ +I ALC  G+I  A  VF +ML 
Sbjct: 220 VTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            GC P+ +T++ L+    K S   + + + ++M+  GCE D +TYN LI+  C +G +++
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A+ +L+++   GC P+A T+  + + +           +  +M    C P+ VT+N ++ 
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                   D  +++   M E+    ++ TY  ++   C +G  ++A + +  +    C K
Sbjct: 400 SLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC-K 458

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           P +  Y  VL+ L    Q ++ EEL+ +M+
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEML 488


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 1/339 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K ++   A   ++ + +     T+ T++ L+    + G   EA+    ++ 
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 227

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD + ++ +I  L +++R+ EA   F  +  +    D + YT L+RG  +AG I 
Sbjct: 228 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  V++ M   G  P+V T S +ID LC+ G+I  A  +F  M   G  PN + ++ L+
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 347

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA + +  L++  QMK+  C  DTITYN LID  CK G +E A    + M+  GC 
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N++     K G+ + A  ++  M    C PN VTY  L+      +        
Sbjct: 408 PDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLY 467

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            + M+E    P+   Y  L+   C  G          EM
Sbjct: 468 FQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 506



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 177/361 (49%), Gaps = 3/361 (0%)

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
           HF +   +    I + T++ +V    +     +AV    ++   GC P    ++ +++ L
Sbjct: 152 HF-ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL 210

Query: 229 CRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C+  R  EA      + D    PDV+ YT+L+ G  +     EA ++F+EM + G+  + 
Sbjct: 211 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDT 270

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             Y+ +I  L + G+I +A  V+  M   GC P+ +T + ++    KA R    ++++  
Sbjct: 271 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKS 330

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M+  G   + + Y+ LI   CK  K++ A+++L  M +  C P+  T+N++   + K GD
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 390

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V  A   + +M +  C+P+  TYNIL+  F  + +TD    +  +M  +   PNV TY  
Sbjct: 391 VEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGT 450

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI+  C       A  Y + M E  C  P S VY  ++  L ++G+L+    L ++M   
Sbjct: 451 LISGLCKRRQLTKASLYFQHMKERGC-PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS 509

Query: 528 G 528
           G
Sbjct: 510 G 510



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 162/391 (41%), Gaps = 40/391 (10%)

Query: 161 VRQFDLAWHFIDLMKSR--NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           ++  DLAW     + S     + +V T + L+  + R     EA +           PD 
Sbjct: 35  LKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDV 94

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFR 276
             ++++I+  C  R   EA +    +++ +   P +  +  ++ G C++G +  A   F 
Sbjct: 95  ETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE 154

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
                G   +++TY+ ++D L +  +I  A  +  ++   GC P   T+N L+    K  
Sbjct: 155 TTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMG 214

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD-------------------------- 370
           R E+ + +  ++   GC  D +TY  LID   K+                          
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYT 274

Query: 371 ---------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
                    GK+  A  V  +M  +GC P+  T + +   + K G +  A R++  M+  
Sbjct: 275 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN V Y+ L+     ++  D  L++  +M++    P+  TY ILI   C  G    A
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 394

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
             +  EM+E  C KP    Y +++    +AG
Sbjct: 395 RAFFDEMLEAGC-KPDVYTYNILVSGFCKAG 424



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 2/204 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K R+ D A   +  MK         T++IL+    ++G    A   F+ M
Sbjct: 342 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 401

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNI 268
            E GC PD   ++I++S  C+      A   FD +      P+V+ Y  L+ G C+   +
Sbjct: 402 LEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQL 461

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           ++A   F+ MK  G  P+ + YS ++D LC+ G++     +F EM   G   NS T   L
Sbjct: 462 TKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRL 520

Query: 329 MRVHVKASRTEKVLQVYNQMKRLG 352
           +    KA+R ++ + ++N +++ G
Sbjct: 521 IFHLCKANRVDEAVSLFNAIRKEG 544



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 46/102 (45%)

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T N L+ +FA +K       L K        P+V T+ +LIT YC       A+  IREM
Sbjct: 61  TGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREM 120

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            E+  + P    + +VL  L ++G++    +  E     G T
Sbjct: 121 EEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCT 162



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 52/246 (21%), Positives = 90/246 (36%), Gaps = 43/246 (17%)

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEP-----NSI-TFNNLMRVHVKASRTEKVLQVY 345
           I  DA+ +  Q  +  D+  E+ +    P     +S+ T N L+ V  +  R  +   + 
Sbjct: 23  ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 82

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-GCNPNASTFNMIFRCISK 404
                     D  T+N LI  +C   + E+A  V+  M    G  P+  T N++   + K
Sbjct: 83  KNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCK 142

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G V  A   +       C  +  TY  ++   A +K     + L +++  N   P + T
Sbjct: 143 SGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIAT 202

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  L+   C M                                    G+L++  +L+ K+
Sbjct: 203 YNALLNGLCKM------------------------------------GRLEEAIDLLRKI 226

Query: 525 VDRGFT 530
           VD G T
Sbjct: 227 VDNGCT 232


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 2/310 (0%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
           PD + +  ++  LC+ +R  +A +  + +  +  +PD  +Y  ++ G C+   + EA  +
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           F +M    I PNV TY+ +I+ LC+  +I  A+++F EM   G  P  +++N L+    K
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
                    V+++M R  C  + +TY  LID   K GK++ A +VL+ MV+KG  PN +T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           ++ +     K+  V+ AH++  +M      P  VTYNIL+     +   +   KL + M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           +    P V TY  L+   C     + A++   EMI + C  P +  Y+ +   L RAG++
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC-PPDAITYDTLAWGLTRAGKV 305

Query: 515 QKHEELVEKM 524
            + +EL+EKM
Sbjct: 306 HEAQELMEKM 315



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 148/305 (48%), Gaps = 1/305 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  +V R  +     +A+     M   G  PD   ++ V+S LC++ +  EA+  F+ +
Sbjct: 11  TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 70

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            K +  P+V+ Y  L+ G C+A  I  A  +F+EM   G  P   +Y+ +ID  C+   +
Sbjct: 71  VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 130

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A DVF +M+   C PN +T+  L+    K+ + +   +V + M + G   +  TY+ L
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 190

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK  ++++A K+L  MV +G  P   T+N++   + +   +  A +++  M   +C
Sbjct: 191 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 250

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P  VTYN L++     K  D   +L  EM      P+  TY  L       G  + A +
Sbjct: 251 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 310

Query: 484 YIREM 488
            + +M
Sbjct: 311 LMEKM 315



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 153/311 (49%), Gaps = 1/311 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K ++ D A   ++ M +R ++     ++ ++    +     EA   F +M 
Sbjct: 12  YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 71

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    P+ + ++ +I+ LC+  R   A   F  +  K + P  + Y  L+ G+C+  ++ 
Sbjct: 72  KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 131

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A+ VF +M  +   PNV TY+ +ID L + G++  A +V   M++ G  PN  T++ L+
Sbjct: 132 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 191

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R ++  ++  QM   G     +TYN L++  C+  KLEDA K+   M ++ C+
Sbjct: 192 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCH 251

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+N + R +     ++GAHR+Y +M    C P+ +TY+ L      +       +L
Sbjct: 252 PTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQEL 311

Query: 450 KKEMEENEVEP 460
            ++M+  +  P
Sbjct: 312 MEKMKLTKRNP 322


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 194/393 (49%), Gaps = 4/393 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F + V +RP    S   ++++++   K+ +F+L     + M++  +   + T+SI +  +
Sbjct: 71  FGDMVKSRP--FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
            R    + A+    +M + G  PD +  S +++  C  +R S+A +  D + +  ++PD 
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +T L+ G       SEA  +  +M   G QP++ TY  V++ LC+ G I  A ++  +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M     + N + FN ++    K    E  + ++ +M+  G   + +TYN LI+C C  G+
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             DA ++L++M+ K  NPN  TFN +     K G +  A +++ +M     +P+T+TYN+
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F      D   ++ K M   +  PN+ TY  LI  +C      +  +  REM  ++
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQR 427

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            L   +  Y  ++Q   +AG     + + ++MV
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 180/376 (47%), Gaps = 32/376 (8%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+        A+EAV   ++M + GC PD + +  V++ LC++     A +  + +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +  + + +V+++  ++   C+  ++  A  +F EM+  GI+PNV TY+ +I+ LC  G+ 
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  + + MLE    PN +TFN L+    K  +  +  +++ +M +   + DTITYN L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C   +L++A ++   MV K C PN  T+N +     K   V     ++ +M     
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA-- 481
             NTVTY  ++Q F  +   D    + K+M  N V  ++ TY IL+   C  G  + A  
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489

Query: 482 -YKYIRE------------MIEEKC----------------LKPGSSVYEMVLQQLRRAG 512
            +KY+++            MIE  C                +KP    Y  ++  L    
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKR 549

Query: 513 QLQKHEELVEKMVDRG 528
            LQ+ ++L  KM + G
Sbjct: 550 LLQEADDLFRKMKEDG 565



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 151/288 (52%), Gaps = 1/288 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D +K +  P ++ +  L+    +         +  +M+  GI  ++YTYSI I+  CR
Sbjct: 71  FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             Q++ A  V A+M+++G EP+ +T ++L+  +  + R    + + +QM  +G + DT T
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +  LI       K  +A+ +++ MV++GC P+  T+  +   + K GD++ A  +  KM+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             + + N V +N ++      +  ++ + L  EME   + PNV TY  LI   C  G W+
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +A + +  M+E+K + P    +  ++    + G+L + E+L E+M+ R
Sbjct: 311 DASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 159/360 (44%), Gaps = 41/360 (11%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA + ++ M++  ++  V  F+ ++    +      AV  
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF---------------FDSLKDKF-- 248
           F  ME  G  P+ + ++ +I+ LC   R S+A                  F++L D F  
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340

Query: 249 -------------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                              +PD I Y  L+ G+C    + EA+++F+ M      PN+ T
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +I+  C+C ++    ++F EM + G   N++T+  +++   +A   +    V+ QM 
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
                 D +TY+ L+   C  GKL+ A+ +   + +     N   +N +   + K G V 
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++     L  +P+ VTYN ++    + +       L ++M+E+   PN  TY  LI
Sbjct: 521 EAWDLFCS---LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 156/358 (43%), Gaps = 8/358 (2%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  RH    + + +       RP  V     Y+ +IN      ++  A   +  M
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT----YNSLINCLCNYGRWSDASRLLSNM 319

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             + +   V TF+ L+  + + G   EA      M +    PD I ++++I+  C   R 
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA+  F  +  K   P++  Y  L+ G+C+   + +   +FREM   G+  N  TY+ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I    + G    A  VF +M+      + +T++ L+       + +  L ++  +++   
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           E +   YN +I+  CK GK+ +A  +  S+  K   P+  T+N +   +     +  A  
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADD 556

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           ++ KMK+    PN+ TYN L++            +L KEM  +    + +T  ++  M
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 5/227 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K ++ +        M  R +     T++ +++ + +AG    A   F +M 
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
                 D + +SI++  LC   +   A   F  L K + E ++ +Y  ++ G C+AG + 
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +F  +    I+P+V TY+ +I  LC    +  A D+F +M E G  PNS T+N L+
Sbjct: 521 EAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           R +++        ++  +M+  G   D  T + L+     DG+L+ +
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKS 623


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 5/380 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   +  +F +A   +  M     E  V T S L+  + +     +A+   ++ME
Sbjct: 48  YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 107

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD + ++ +I   C+    ++A   FD + +D    D + Y +LV G C +G  S
Sbjct: 108 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 167

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+ R+M M  I PNV T++ VID   + G+ + A  ++ EM     +P+  T+N+L+
Sbjct: 168 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 227

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  R ++  Q+ + M   GC  D +TYN LI+  CK  ++++  K+   M ++G  
Sbjct: 228 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +  T+N I +   + G  + A  ++ +M      PN  TY+IL+     +   +  L L
Sbjct: 288 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVL 344

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M+++E+E ++ TY I+I   C +G+  +A+   R +   K LKP    Y  ++    
Sbjct: 345 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVSYTTMISGFC 403

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           R  Q  K + L  KM + G 
Sbjct: 404 RKRQWDKSDLLYRKMQEDGL 423



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 172/353 (48%), Gaps = 6/353 (1%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           +++SR +   VD FS ++ +  ++      +  F+ ME  G   D  +++IVI+ LCR  
Sbjct: 1   MIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 59

Query: 233 RASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           R   A S    + K  +EPDV+  ++L+ G+C+   + +A  +  +M+  G +P+V  Y+
Sbjct: 60  RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 119

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +ID  C+ G +  A ++F  M   G   +++T+N+L+     + R     ++   M   
Sbjct: 120 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
               + IT+  +ID   K+GK  +A+K+   M R+  +P+  T+N +   +   G V+ A
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 239

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            +M   M    C P+ VTYN L+  F  SK  D   KL +EM +  +  +  TY  +I  
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y   G  + A    +E+      +P    Y ++L  L    +++K   L E M
Sbjct: 300 YFQAGRPDAA----QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 348



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 142/282 (50%), Gaps = 1/282 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P ++ ++ ++    ++ N      +F  M++ GI  ++Y+Y+IVI+ LCRC +   A  V
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +M++ G EP+ +T ++L+    + +R    + + ++M+ +G   D + YN +ID  CK
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G + DA+++ + M R G   +A T+N +   +   G  + A R+   M      PN +T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +  ++ +F         +KL +EM    V+P+V TY  LI   C  G  + A + +  M+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + CL P    Y  ++    ++ ++ +  +L  +M  RG   
Sbjct: 248 TKGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 288



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 165/354 (46%), Gaps = 37/354 (10%)

Query: 143 EFVHSPDLY--HEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           +F + PD+     +IN      R FD A   +  M+       V  ++ ++    + GL 
Sbjct: 73  KFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 131

Query: 200 AEAVHAFNRMEEYGCAPDKIAF-SIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNL 258
            +AV  F+RME  G   D + + S+V  + C  R +  A+   D +     P+VI +T +
Sbjct: 132 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 191

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +  + + G  SEA +++ EM    + P+V+TY+ +I+ LC  G++  A  +   M+  GC
Sbjct: 192 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 251

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH----------- 367
            P+ +T+N L+    K+ R ++  +++ +M + G   DTITYN +I  +           
Sbjct: 252 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 311

Query: 368 ---------------------CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
                                C + ++E A+ +  +M +     + +T+N++   + K+G
Sbjct: 312 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 371

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
           +V  A  ++  +     +P+ V+Y  ++  F   +  D    L ++M+E+ + P
Sbjct: 372 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 189/388 (48%), Gaps = 3/388 (0%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           V A    V S   Y  ++   GK     + W  +  M+   V+  V +++I +R   +AG
Sbjct: 207 VMATDGIVPSVRTYSVLMLAFGKRDVETVVW-LLREMEDHGVKPNVYSYTICIRVLGQAG 265

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYT 256
              EA     +ME+ GC PD +  +++I ILC   R S+A+  F  +K    +PD + Y 
Sbjct: 266 RFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYI 325

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L+      G+      ++  MK  G   NV  Y+ V+DALC+ G++  A DVF +M + 
Sbjct: 326 TLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQK 385

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G EP   ++N+L+   +KA R    L+++N M   G   +  TY   I+ + K G+   A
Sbjct: 386 GIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKA 445

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           IK    M  KG  P+    N +   ++K G +  A R++ ++K +   P+ +TY ++++ 
Sbjct: 446 IKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKC 505

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
            + + + D  +K+  EM E    P+V     LI      G  N A+K   E+ +E  L P
Sbjct: 506 CSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHEL-KEMNLDP 564

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               Y  +L  L R G++++   L+E+M
Sbjct: 565 TDCTYNTLLAGLGREGKVKEVMHLLEEM 592



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 184/409 (44%), Gaps = 16/409 (3%)

Query: 102  STAHSISPSTVRHV-IEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
            S+ HS+    ++   +EKS      I L ++L          +F  SP + H       K
Sbjct: 707  SSFHSLMEGILKRAGMEKSIEFAENIALSRIL--------LDDFFLSPLIRH-----LCK 753

Query: 161  VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
             ++   A   +   +S  V +   +++ L+   V   L   A   F+ M+  GC PD+  
Sbjct: 754  SKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFT 813

Query: 221  FSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
            +++++  + +  R  +       +  K +E   + Y  ++ G  ++  + EA  ++ ++ 
Sbjct: 814  YNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLM 873

Query: 280  MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
              G  P   TY  ++D L + G+I  A D+F EML+ GC+PN   +N L+  +  A  TE
Sbjct: 874  SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTE 933

Query: 340  KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
            KV +++  M   G   D  +Y  LI   C  G+L D++     +   G  P+  T+N++ 
Sbjct: 934  KVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLI 993

Query: 400  RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
              + + G +  A  ++  M+     PN  TYN L+             K+ +E+ +N  +
Sbjct: 994  HGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWK 1053

Query: 460  PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            PNV TY  LI  Y   G  +NA+    +MI   C  P SS Y  +  QL
Sbjct: 1054 PNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGC-PPNSSTYMQLPNQL 1101



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 187/389 (48%), Gaps = 10/389 (2%)

Query: 148  PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHAF 206
            PDL      L G V++  L   F    + + V      T   ++  +V+ GL  EA+H  
Sbjct: 634  PDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHT- 692

Query: 207  NRMEEY----GCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRG 261
              ++EY    G   D+ +F  ++  + ++    ++  F +++   +   D    + L+R 
Sbjct: 693  --LKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRH 750

Query: 262  WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             C++    EA  + ++ +  G+     +Y+ +I  L     I  A  +F+EM  +GC+P+
Sbjct: 751  LCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPD 810

Query: 322  SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
              T+N ++    K+ R E +L+V  +M   G E+  +TYN +I    K   L +A+ +  
Sbjct: 811  EFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYY 870

Query: 382  SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
             ++ +G +P   T+  +   + K G +  A  ++ +M D  C+PN   YNIL+  +  + 
Sbjct: 871  KLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAG 930

Query: 442  STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
            +T+ V +L + M +  + P++ +Y +LI   C  G  N++  Y R++ E   L+P    Y
Sbjct: 931  NTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELG-LEPDLITY 989

Query: 502  EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +++  L R+G+L++   L   M   G  
Sbjct: 990  NLLIHGLGRSGRLEEAVSLFNDMEKSGIA 1018



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 181/389 (46%), Gaps = 9/389 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLA---GKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           + L  F  V  +P  VH+ +  + M+ L    G+VR  D+A  F DLM+ + V+  V TF
Sbjct: 94  EALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVR--DMAQVF-DLMQRQIVKANVGTF 150

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK- 245
             + R     G    A  A   M+E G   +   ++ +I  L +     EA   +  +  
Sbjct: 151 LTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMAT 210

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           D   P V  Y+ L+  + +  ++     + REM+  G++PNVY+Y+I I  L + G+   
Sbjct: 211 DGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEE 269

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A+ +  +M + GC+P+ +T   L+++   A R      V+ +MK    + D +TY  L+D
Sbjct: 270 AYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLD 329

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
               +G     I++ N+M   G N N   +  +   + ++G V+ A  ++ +MK    EP
Sbjct: 330 KCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEP 389

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
              +YN L+  F  +   +  L+L   M  +   PN  TY + I  Y   G    A K  
Sbjct: 390 QQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRY 449

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            E+++ K + P       VL  L ++G+L
Sbjct: 450 -ELMKSKGIVPDVVAGNAVLYSLAKSGRL 477



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 135/269 (50%), Gaps = 2/269 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+ + +  Y ++G + +A+  +  M+  G  PD +A + V+  L +  R   A+  F  L
Sbjct: 428 TYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL 487

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           K     PD I YT +++   +A N  EA +VF EM      P+V   + +ID L + G+ 
Sbjct: 488 KSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRG 547

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F E+ E+  +P   T+N L+    +  + ++V+ +  +M       + ITYN +
Sbjct: 548 NEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTV 607

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +DC CK+G++  A+ +L +M  KGC P+ S++N     + K   +  A R++ +MK +  
Sbjct: 608 LDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-L 666

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            P+  T   ++  F  +   +  L   KE
Sbjct: 667 APDYTTLCTILPSFVKNGLMNEALHTLKE 695



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 180/421 (42%), Gaps = 41/421 (9%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+   + +I+   K  + + AW     +K  N++ T  T++ L+    R G   E +H 
Sbjct: 529 PDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHL 588

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCR 264
              M      P+ I ++ V+  LC+    + A     ++  K   PD+  Y   + G  +
Sbjct: 589 LEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVK 648

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA-HDVFAEMLEVGCEPNSI 323
              ++EA R+F +MK   + P+  T   ++ +  + G +  A H +   +L+ G + +  
Sbjct: 649 EDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRS 707

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +F++LM   +K +  EK ++    +       D    + LI   CK  K  +A +++   
Sbjct: 708 SFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKF 767

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              G +    ++N +   +     ++ A  ++ +MK L C+P+  TYN+++     S   
Sbjct: 768 ESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRI 827

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILIT-------MYCGM--------------------- 475
           + +LK++KEM     E    TY  +I+       +Y  M                     
Sbjct: 828 EDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPL 887

Query: 476 -------GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                  G   +A     EM++  C KP  ++Y ++L   R AG  +K  EL + MVD+G
Sbjct: 888 LDGLLKDGKIEDAEDLFDEMLDYGC-KPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQG 946

Query: 529 F 529
            
Sbjct: 947 I 947



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 3/299 (1%)

Query: 233 RASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           R  +    FD ++ +  + +V  +  + R     G +  A      MK AGI  N YTY+
Sbjct: 127 RVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYN 186

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I  L + G    A +V+  M   G  P+  T++ LM    K    E V+ +  +M+  
Sbjct: 187 GLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD-VETVVWLLREMEDH 245

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G + +  +Y   I    + G+ E+A K+L  M  +GC P+  T  ++ + +   G V+ A
Sbjct: 246 GVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDA 305

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ KMK    +P+ VTY  L+     +  +  V+++   M+ +    NV  Y  ++  
Sbjct: 306 KDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDA 365

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            C +G  + A     +M ++K ++P    Y  ++    +A +L    EL   M   G T
Sbjct: 366 LCQVGRVDEASDVFDQM-KQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPT 423



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 5/197 (2%)

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           LMR H    R   + QV++ M+R   +A+  T+  +      +G L  A   L  M   G
Sbjct: 121 LMRAH---GRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAG 177

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              N+ T+N +   + K G    A  +Y  M      P+  TY++LM  F   +  + V+
Sbjct: 178 IVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFG-KRDVETVV 236

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L +EME++ V+PNV +Y I I +    G +  AYK +++M +E C KP      +++Q 
Sbjct: 237 WLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGC-KPDVVTNTVLIQI 295

Query: 508 LRRAGQLQKHEELVEKM 524
           L  AG++   +++  KM
Sbjct: 296 LCDAGRVSDAKDVFWKM 312



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N++++     G++ D  +V + M R+    N  TF  IFR +   G +  A      MK+
Sbjct: 116 NYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKE 175

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                N+ TYN L+     S      +++ K M  + + P+V TY +L+  + G      
Sbjct: 176 AGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAF-GKRDVET 234

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               +REM E+  +KP    Y + ++ L +AG+ ++  ++++KM D G
Sbjct: 235 VVWLLREM-EDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEG 281


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 167/356 (46%), Gaps = 5/356 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK   +E  V T++IL++   +      A      M   GC PD+++++ +IS LC+  +
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             EA+     L   F P V VY  L+ G C+     EA ++  EM   GI PNV +Y+ +
Sbjct: 232 VKEARE----LAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I+AL   G +  +  V A+M   GC PN  TF +L++       + + L  +++M R G 
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + + YN L+   C    L DA+ V N M   GC PN  T++ +    +K GD++GA  
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  M    C PN V Y  ++ +   +   +    L + M+     PN  T+   I   C
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G G  + A K   +M    C  P ++ Y  +L  L +  +  +   LV+ M  RG 
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCF-PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 177/359 (49%), Gaps = 2/359 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN        +L+   +  M +R     + TF+ L++ +   G + EA+  ++RM 
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ +A++ ++  LC KR   +A S F+ ++ +   P+V  Y+ L+ G+ +AG++ 
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  V+  M   G  PNV  Y+ ++D LCR     +A+ +   M    C PN++TFN  +
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +    + R +  ++V++QM   GC  +T TYN L+D   KD +  +A  ++  M  +G  
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N  T+N I       G +  A  + GKM     +P+ +T NI++  +      ++ ++L
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
              +   +  P++  Y  LI+  C       A  Y+R M+ E  + P  + + ++++ L
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEG-ISPNVATWNVLVRHL 641



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 129/294 (43%), Gaps = 8/294 (2%)

Query: 237 AQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           A  +F S+ +   F+   + Y  ++        +   + + ++MK+ GI  +   +  VI
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
            +  R G   +A   F  M +   +P    +N+++   +  +R + +  +Y+ MK+ G E
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            +  TYN L+   CK+ +++ A K+L  M  KGC+P+  ++  +   + KLG V  A  +
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
                 +   P+   YN L+       + +   +L  EM    ++PNV +Y  +I     
Sbjct: 239 -----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G+   +   + +M    C  P    +  +++     G   +  +  ++M+  G
Sbjct: 294 AGNVELSLAVLAKMFARGC-SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 193/386 (50%), Gaps = 4/386 (1%)

Query: 151 YHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ +I  L G+ R  + A   ++ M  R     V T++IL+    +     +A+   + M
Sbjct: 169 YNTLIRGLCGRGRTSN-ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM 227

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
            + GCAPD + +++V++ +C++ R  +A  F  +L     EP+ + Y  +++G   A   
Sbjct: 228 HDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERW 287

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +AE++  EM   G  PNV T++++I  LCR G +  A +V  +M + GC PNS+++N L
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K  +  K ++    M   GC  D ++YN L+   C++G+++ AI++L+ +  KGC
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +P   ++N +   ++K G    A  +  +M     +P+ +TY+ +          +  ++
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
              ++++  + P    Y  ++   C     +NA      MI   C+ P  S Y ++++ L
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCM-PNESTYTILVEGL 526

Query: 509 RRAGQLQKHEELVEKMVDRGFTARPL 534
              G +++  EL  ++  RG   + L
Sbjct: 527 AYEGLVKEARELFAQLCSRGVVNKKL 552



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 183/385 (47%), Gaps = 7/385 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PD+  Y+ M+       Q D A   +  M    VE    T++ L+R     G  + A+ 
Sbjct: 131 GPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALA 187

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M   GC PD + ++I++   C++    +A    D + DK   PD++ Y  ++ G C
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G + +A    + +   G +PN  +Y+IV+  L    +   A  +  EM   GC PN +
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    +    E  ++V  QM + GC  ++++YN L+   CK  K+  A++ +  M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V +GC P+  ++N +   + + G+V+ A  +  ++KD  C P  ++YN ++     +  T
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              L+L  EM    ++P++ TY  + +  C       A +   + +++  ++P +++Y  
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK-VQDMGIRPTAALYNA 486

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           +L  L +  +     +L   M+  G
Sbjct: 487 ILLGLCKRRETHNAIDLFAYMISSG 511



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 173/369 (46%), Gaps = 10/369 (2%)

Query: 163 QFDLAWHFIDLMKSRN--VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           + D A   +D +   N      V   + L+++   +G  A+A             PD + 
Sbjct: 82  ELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLA-----ASGPDVMV 136

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           ++ +++  C   +   A+     +    EPD   Y  L+RG C  G  S A  V  +M  
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMP--VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR 194

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P+V TY+I+++A C+     +A  +  EM + GC P+ +T+N ++    +  R E 
Sbjct: 195 RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVED 254

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            ++    +   GCE +T++YN ++       + EDA K++  M  KGC PN  TFNM+  
Sbjct: 255 AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS 314

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + G V  A  +  +M    C PN+++YN L+  F   K     ++  + M      P
Sbjct: 315 FLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYP 374

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           ++ +Y  L+T  C  G  + A + + ++ ++ C  P    Y  V+  L +AG+ ++  EL
Sbjct: 375 DIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC-SPVLISYNTVIDGLTKAGKTKEALEL 433

Query: 521 VEKMVDRGF 529
           +++M  +G 
Sbjct: 434 LDEMTSKGL 442



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 166/349 (47%), Gaps = 7/349 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  ++    K   +  A   +D M  +     + T+++++    + G   +A+  
Sbjct: 199 PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEF 258

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              +  YGC P+ ++++IV+  L    R  +A+   + +  K   P+V+ +  L+   CR
Sbjct: 259 LKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCR 318

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  V  +M   G  PN  +Y+ ++ A C+  +I +A +    M+  GC P+ ++
Sbjct: 319 RGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVS 378

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    +    +  +++ +Q+K  GC    I+YN +ID   K GK ++A+++L+ M 
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT 438

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P+  T++ I   + +   +  A R + K++D+   P    YN ++      + T 
Sbjct: 439 SKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETH 498

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
             + L   M  +   PN +TY IL+    G+  +    K  RE+  + C
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVE---GLA-YEGLVKEARELFAQLC 543



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 6/191 (3%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           + + F   + +R  +   PD+  Y+ ++    +  + D+A   +  +K +     + +++
Sbjct: 359 KAMEFVELMVSRGCY---PDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYN 415

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD- 246
            ++    +AG   EA+   + M   G  PD I +S + S LCR+ R  EA   F  ++D 
Sbjct: 416 TVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM 475

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P   +Y  ++ G C+      A  +F  M  +G  PN  TY+I+++ L   G +  A
Sbjct: 476 GIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEA 535

Query: 307 HDVFAEMLEVG 317
            ++FA++   G
Sbjct: 536 RELFAQLCSRG 546


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 201/418 (48%), Gaps = 38/418 (9%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y+ +I+   K + F  A+ F+  M   +   TV T++ +V    +AG   +AV  
Sbjct: 43  PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKL 102

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-------------------- 245
            + M + GC+P+   +++++  LC +R+  EA+   + +                     
Sbjct: 103 LDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK 162

Query: 246 -DKFE------------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            D+ +            PDV+ YT ++ G C++G++  A R+  +M   G  P+V TYS 
Sbjct: 163 CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSS 222

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID  C+ G++ RA  +   ML++GC PN + +N+L+    +     K   +  +M+R G
Sbjct: 223 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D ++YN  ID  CK  +++ A  V + MV +GC PNAS+++M+   + K  +++ A 
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL-KKEMEENEVEPNVNTYRILITM 471
            +  + ++     + + Y +L+         D    L  K ++E   EP+V  Y +++  
Sbjct: 343 TLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 402

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +C     + A +  ++M+E  C       + +++  L    +L   E ++  MVD GF
Sbjct: 403 HCKRRQIDKALQIHKQMLERNCCN--VVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 458



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 174/344 (50%), Gaps = 13/344 (3%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
           TF+IL+R   R+    +A     RM+E GC PD   ++ +IS   + +   +A  F  + 
Sbjct: 12  TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +K+   P V+ YTN+V G C+AG   +A ++  EM+  G  PN+YTY+++++ LC   ++
Sbjct: 72  VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 131

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +  EM   G  P+ +T+N+ ++   K  R ++  +    + R+    D ++Y  +
Sbjct: 132 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTV 188

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK G L+ A ++L+ M  +GC P+  T++ +     K G+V  A  +   M  L C
Sbjct: 189 INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 248

Query: 424 EPNTVTYNILM----QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
            PN V YN L+    ++    K+ DM++    EME     P+V +Y   I   C      
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLV----EMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
            A      M+E  C  P +S Y M++++L +  +L     LVE+
Sbjct: 305 KAKAVFDRMVERGC-TPNASSYSMLVEELCKKKELDDAITLVEQ 347



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 176/382 (46%), Gaps = 7/382 (1%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD +   I L G  R  Q + A   +  MK          ++ L+  Y +A    +A   
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              M +  C P  + ++ ++  LC+  R  +A    D ++DK   P++  Y  +V G C 
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              + EA+++  EM + G  P+V TY+  I  LC+C ++  A    A M      P+ ++
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVS 184

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    K+   +   ++ +QM   GC  D +TY+ LID  CK G++E A+ +L+SM+
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           + GC PN   +N +   + +LG +  A  M  +M+     P+ V+YN  +     ++   
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               +   M E    PN ++Y +L+   C     ++A   + E   EK       +Y ++
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLV-EQAREKYQIVDILLYTVL 363

Query: 505 LQQLRRAGQLQKHEELVEKMVD 526
           L  L + G+  +   L  K++D
Sbjct: 364 LDGLCKGGRFDEACALFSKVLD 385



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 4/282 (1%)

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PD   +  L+RG CR+  + +A ++   MK  G  P+   Y+ +I    +     +A  
Sbjct: 7   QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
             AEM++  C P  +T+ N++    KA RT+  +++ ++M+  GC  +  TYN +++  C
Sbjct: 67  FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++ KL++A K+L  M  +G  P+  T+N   + + K   V+ A +   +M      P+ V
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVV 183

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           +Y  ++     S   D   ++  +M      P+V TY  LI  +C  G    A   +  M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++  C +P    Y  +L  L R G + K E+++ +M  RGFT
Sbjct: 244 LKLGC-RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFT 284



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 170/386 (44%), Gaps = 68/386 (17%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +IN   K    D A   +D M +R     V T+S L+  + + G    A+ 
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M + GC P+ +A++ ++  L R     +A+     ++ + F PDV+ Y   + G C
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYS-------------------------------- 291
           +A  + +A+ VF  M   G  PN  +YS                                
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 292 ---IVIDALCRCGQITRAHDVFAEML-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
              +++D LC+ G+   A  +F+++L E  CEP+   +N ++  H K  + +K LQ++ Q
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQ 418

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M    C  + +T+N L+   C D +L DA  +L +MV +G  P+  T+  +   + K G 
Sbjct: 419 MLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477

Query: 408 VNGAHRMYGKMKDLKCEPNTVTY----------------------------NILMQMFAT 439
              A  ++ +     C P+ VTY                            N ++  +A 
Sbjct: 478 SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAE 537

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTY 465
           + S D+ LKL  E+ E++VEPN  T+
Sbjct: 538 NGSGDLGLKLFVELIESDVEPNARTF 563



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 164/375 (43%), Gaps = 46/375 (12%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + PD+  Y+  I    K  + D A  F+  M    V   V +++ ++    ++G    A 
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSAS 202

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
              ++M   GC PD + +S +I   C+      A    DS LK    P+++ Y +L+   
Sbjct: 203 RMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            R G+I +AE +  EM+  G  P+V +Y+  ID LC+  ++ +A  VF  M+E GC PN+
Sbjct: 263 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 322

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMK-------------------RLG----------- 352
            +++ L+    K    +  + +  Q +                   + G           
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382

Query: 353 ------CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
                 CE D   YN ++D HCK  +++ A+++   M+ + C  N  T+N++   +    
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDD 441

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            ++ A  M   M D    P+ VTY  L+        +   L+L +E  +    P+V TY 
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501

Query: 467 ILITMYCGMGHWNNA 481
            LIT   G+ H N A
Sbjct: 502 ALIT---GLVHENMA 513



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 4/218 (1%)

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M++  C+P++ TF  L+R   ++++ EK  Q+  +MK +GC  D   YN LI  + K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
              A K L  MV+  C P   T+  I   + K G    A ++  +M+D  C PN  TYN+
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           +++     +  D   K+ +EM      P+V TY   I   C     + A K++  M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + P    Y  V+  L ++G L     ++++M +RG T
Sbjct: 178 -VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCT 214



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 138/290 (47%), Gaps = 9/290 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR-M 209
           Y  ++    K ++ D A   ++  + +   + +  +++L+    + G   EA   F++ +
Sbjct: 325 YSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVL 384

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +E  C PD   +++++   C++R+  +A      + ++   +V+ +  LV G C    +S
Sbjct: 385 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLS 444

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +AE +   M   G  P+  TY  ++DA+C+CG+   A ++F E ++ GC P+ +T++ L+
Sbjct: 445 DAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALI 504

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              V  +  E+   ++ ++       D   +N +I  + ++G  +  +K+   ++     
Sbjct: 505 TGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVE 557

Query: 390 PNASTFNM-IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           PNA TF   I   + K   +  A  ++ +       P+    N L+ +FA
Sbjct: 558 PNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFA 607



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 32/265 (12%)

Query: 150 LYHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           LY  +++   K  +FD A   F  ++  +  E  V  +++++  + +     +A+    +
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQ 418

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
           M E  C  + + ++I++  LC   R S+A++   ++ D+ F PD + Y  LV   C+ G 
Sbjct: 419 MLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH-------------------- 307
            + A  +F E    G  P+V TYS +I  L        A+                    
Sbjct: 478 SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAE 537

Query: 308 --------DVFAEMLEVGCEPNSITFNNLMRVH-VKASRTEKVLQVYNQMKRLGCEADTI 358
                    +F E++E   EPN+ TF   +    VKA    K   ++++  + G   D  
Sbjct: 538 NGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLF 597

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSM 383
             N LID   K G LE+A ++  SM
Sbjct: 598 VANTLIDVFAKCGDLEEARRIFYSM 622


>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
          Length = 691

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 221/438 (50%), Gaps = 51/438 (11%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVDTFSI 188
           L FF+WV+ +  F H    +  M+   G+ R  ++A +F+  ++ R+   V++    F+ 
Sbjct: 85  LRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNS 143

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+R Y  AGL  E+V  F  M++ G +P  + F+ ++SIL ++ R   A   FD ++  +
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203

Query: 249 --EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG------------------IQPNVY 288
              PD   +  L+ G+C+   + EA R+F++M++AG                  + PNV 
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNVV 263

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +Y+ ++   C   +I  A  VF +ML  G +PN++T+N L++   +A R       Y+++
Sbjct: 264 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------YDEI 316

Query: 349 KRL---GCEA------DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           K +   G +A      D  T+N LI  HC  G L+ A+KV   M+    +P++++++++ 
Sbjct: 317 KDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLI 376

Query: 400 RCISKLGDVNGAHRMYGKM--------KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           R +    + + A  ++ ++        KD +C+P    YN + +    +  T    K+ +
Sbjct: 377 RTLCMRNEFDRAETLFNELFEKEVLLGKD-ECKPLAAAYNPMFEYLCANGKTKQAEKVFR 435

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           ++ +  V+ +  +Y+ LIT +C  G +  AY+ +  M+  + + P    YE+++  L + 
Sbjct: 436 QLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFV-PDLETYELLIDGLLKI 493

Query: 512 GQLQKHEELVEKMVDRGF 529
           G+     + +++M+   +
Sbjct: 494 GEALLAHDTLQRMLRSSY 511



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 181/372 (48%), Gaps = 45/372 (12%)

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV----Y 255
           A+ +  F+ +   G +  + +F +++  L R R  + A++F  S++ +    V +    +
Sbjct: 82  ADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYF 141

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +L+R +  AG   E+ ++F+ MK  GI P+V T++ ++  L + G+   AHD+F EM  
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201

Query: 316 V-GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG------------------CEAD 356
             G  P+S TFN L+    K S  ++  +++  M+  G                     +
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPN 261

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            ++Y  L+  +C   ++++A+ V + M+ +G  PNA T+N + + +S+      AHR Y 
Sbjct: 262 VVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE------AHR-YD 314

Query: 417 KMKDL---------KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++KD+            P+  T+NIL++    +   D  +K+ +EM   ++ P+  +Y +
Sbjct: 315 EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 374

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCL------KPGSSVYEMVLQQLRRAGQLQKHEELV 521
           LI   C    ++ A     E+ E++ L      KP ++ Y  + + L   G+ ++ E++ 
Sbjct: 375 LIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVF 434

Query: 522 EKMVDRGFTARP 533
            +++ RG    P
Sbjct: 435 RQLMKRGVQDPP 446



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 160/344 (46%), Gaps = 16/344 (4%)

Query: 155 INLAGKVRQFDLAWHFID--LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           + LAGKV+   +A + +   L K+ +V   V +++ LVR Y       EAV  F+ M   
Sbjct: 235 MELAGKVK---IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSR 291

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTNLVRGWCRAGNIS 269
           G  P+ + ++ +I  L    R  E +       D F    PD   +  L++  C AG++ 
Sbjct: 292 GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLD 351

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE----VG---CEPNS 322
            A +VF+EM    + P+  +YS++I  LC   +  RA  +F E+ E    +G   C+P +
Sbjct: 352 AAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLA 411

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             +N +        +T++  +V+ Q+ + G + D  +Y  LI  HC++GK + A ++L  
Sbjct: 412 AAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVL 470

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M+R+   P+  T+ ++   + K+G+   AH    +M      P   T++ ++   A  K 
Sbjct: 471 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 530

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            +    L   M E  +  N++    ++ +         A+  +R
Sbjct: 531 ANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR 574



 Score = 39.7 bits (91), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 4/209 (1%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V  P  Y  +I    +  +F  A+  + LM  R     ++T+ +L+   ++ G A  A  
Sbjct: 442 VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 501

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWC 263
              RM      P    F  V++ L +++ A+E+       L+ +   ++ + T +VR   
Sbjct: 502 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLF 561

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +   ++ E+ F  +++      +     ++  LC   ++  AH +    LE     +  
Sbjct: 562 SS---AQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDID 618

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           T N ++    K  R  +   +YN++  LG
Sbjct: 619 TCNTVIEGLCKHKRHSEAFSLYNELVELG 647


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 164/325 (50%), Gaps = 5/325 (1%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD----KFEPDVIVYTNLVRGWC 263
           RM E GC P+ ++++ ++   C + RA EA      + D       P+++ Y  ++ G+ 
Sbjct: 156 RMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFF 215

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G + +A  +F +M   GI PNV TY+IVID LC+   + RA  VF +M++ G  PN +
Sbjct: 216 TEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIV 275

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+  ++   + ++V+++  +M   G E D  TY  L+D  CK GK  +A K+ +SM
Sbjct: 276 TYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM 335

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +RKG  P+ S + +I    +  G ++  H     M      PN   +NI+   FA     
Sbjct: 336 IRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMI 395

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              + +  +M +  + PNV  Y  LI   C +G  ++A     +MI E  + P   V+  
Sbjct: 396 GEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEG-VAPNIVVFTS 454

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L    + +K  EL  +MV++G
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQG 479



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 172/379 (45%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K +  D A      M  + V   + T++ L+  Y+  G   E V     M 
Sbjct: 242 YTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMS 301

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            +G  PD   + +++  LC+K + +EA+  FDS+ +   +PDV +Y  ++ G+   G +S
Sbjct: 302 AHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALS 361

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E       M   GI PN Y ++IV  A  +   I  A D+F +M + G  PN + +  L+
Sbjct: 362 EMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLI 421

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R +     +NQM   G   + + +  L+   C   K E A ++   MV +G +
Sbjct: 422 DALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIH 481

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN   FN I   +   G V  A R+   M+ +   P+ ++YN L++       TD   KL
Sbjct: 482 PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKL 541

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    ++PN  TY  L+  YC  G  ++AY   +EM+    + P    Y  +L  L 
Sbjct: 542 LDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNG-ITPVVVTYNTILHGLF 600

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  +  + +EL   M+  G
Sbjct: 601 KTRRFSEAKELYLNMITSG 619



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F+DLM    +      F+I+   + +  +  EA+  FN+M + G +P+ + ++ +I  LC
Sbjct: 366 FLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALC 425

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  R  +A+  F+ +  +   P+++V+T+LV G C      +A  +F EM   GI PNV 
Sbjct: 426 KLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVV 485

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            ++ ++  LC  G++ +A  +   M  VG  P+ I++N L+R H    +T++  ++ + M
Sbjct: 486 FFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIM 545

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             +G + +  TYN L+  +C+DG+++DA  V   M+  G  P   T+N I   + K    
Sbjct: 546 LSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRF 605

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +Y  M     + +  TYNI++   + +   D  LK+ + +   +++ ++ T+ I+
Sbjct: 606 SEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIM 665

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I      G   +A   +   I    L P  + Y ++ + L   G L++ + +  +M   G
Sbjct: 666 IGALLKDGRKEDAMN-LFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 168/382 (43%), Gaps = 37/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++ ++  +   G   +A + F  M + G  P+ + ++IVI  LC+ +    A+  F  +
Sbjct: 206 SYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQM 265

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            DK   P+++ YT L+ G+   G   E  R+ +EM   G++P+ +TY +++D LC+ G+ 
Sbjct: 266 IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKC 325

Query: 304 TRAHDVFAEMLEVGCEP-----------------------------------NSITFNNL 328
           T A  +F  M+  G +P                                   N   FN +
Sbjct: 326 TEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIV 385

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                K +   + + ++N+M++ G   + + Y  LID  CK G+++DA    N M+ +G 
Sbjct: 386 FCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN   F  +   +  +     A  ++ +M +    PN V +N +M    T        +
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L   ME     P++ +Y  LI  +C +G  + A K +  M+    LKP    Y  +L   
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG-LKPNECTYNTLLHGY 564

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            R G++     + ++M+  G T
Sbjct: 565 CRDGRIDDAYSVFQEMLSNGIT 586



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 165/367 (44%), Gaps = 4/367 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y  +I+   K+ + D A    + M +  V   +  F+ LV          +A  
Sbjct: 411 SPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGE 470

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
            F  M   G  P+ + F+ ++  LC + R  +AQ   D + +    PD+I Y  L+RG C
Sbjct: 471 LFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHC 530

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G   EA ++   M   G++PN  TY+ ++   CR G+I  A+ VF EML  G  P  +
Sbjct: 531 LVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVV 590

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N ++    K  R  +  ++Y  M   G +    TYN +++   K+  +++A+K+  S+
Sbjct: 591 TYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSL 650

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             K    +  TFN++   + K G    A  ++  +      P+  TY ++ +      S 
Sbjct: 651 CSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSL 710

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +    +  EME++   PN      L+      G  + A  Y+ + I+EK     +S   M
Sbjct: 711 EEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSK-IDEKNFSLEASTTSM 769

Query: 504 VLQQLRR 510
           ++    R
Sbjct: 770 LISLFSR 776



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 6/289 (2%)

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFRE-MKMAGIQPNVYTYSIVIDALCRCGQITR 305
           K  PDV  Y+ LV  +CR G +      F   +K      +V   + ++  LC   ++  
Sbjct: 89  KVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGE 148

Query: 306 AHDVFAE-MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM---KRLGCEADTITYN 361
           A  V    M E+GC PN +++N L++     +R E+ L++ + M   +   C  + ++YN
Sbjct: 149 AMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYN 208

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+    +G+++ A  +   M  +G  PN  T+ ++   + K   V+ A  ++ +M D 
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN VTY  L+  + +      V+++ KEM  + +EP+  TY +L+   C  G    A
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            K    MI  K +KP  S+Y ++L      G L +    ++ MV  G +
Sbjct: 329 RKLFDSMIR-KGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGIS 376


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 194/419 (46%), Gaps = 40/419 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ ++    K +Q+   +   + M S  +   V T +IL+  +        A     ++ 
Sbjct: 72  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   F+ +I  LC + +  +A   FD +  + F+P+V+ Y  L+ G C+ GN +
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+ R M+    QP+V  Y+ +ID+LC+  Q+T A ++F++M+  G  P+  T+ +L+
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK----------------- 372
                    + V  + NQM       D + ++ ++D  CK+GK                 
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311

Query: 373 ------------------LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                             +++A+KV ++MV  G  PN  ++N +     K+  ++ A  +
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M   +  PNTVTYN LM      +  D +  L  EM  +   P++ TYRIL+   C 
Sbjct: 372 FEEMCQKELIPNTVTYNTLMHXCHVGRLQDAI-ALFHEMVAHGQIPDLATYRILLDYLCK 430

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
             H + A   ++  IE   + P   +Y +V+  + RAG+L+   ++   +  +G   RP
Sbjct: 431 KSHLDEAMALLKT-IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL--RP 486



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 179/401 (44%), Gaps = 38/401 (9%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A H  D M     +  V T+  L+    + G    A+     ME+  C PD + ++ +I 
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 217

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC+ R+ +EA + F  +  +   PD+  YT+L+   C          +  +M  + I P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V  +S V+DALC+ G+IT AHDV   M+  G EPN +T+N LM  H   S  ++ ++V+
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + M   G   + I+YN LI+ +CK  +++ A  +   M +K   PN  T+N +      +
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHV 396

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP----- 460
           G +  A  ++ +M      P+  TY IL+         D  + L K +E + ++P     
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456

Query: 461 ------------------------------NVNTYRILITMYCGMGHWNNAYKYIREMIE 490
                                         NV TY I+I   C  G  + A K   EM  
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             C  P    Y  + Q L +  +  +  +L+++M+ RGF+A
Sbjct: 517 NGC-SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSA 556



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 178/409 (43%), Gaps = 45/409 (11%)

Query: 104 AHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
                P+ V +  +I   C V +    +++L        +P+ V    +Y  +I+   K 
Sbjct: 167 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV----VYTSIIDSLCKD 222

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           RQ   A++    M  + +   + T++ L+                N+M      PD + F
Sbjct: 223 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 282

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           S V+  LC++ + +EA    D +  +  EP+V+ Y  L+ G C    + EA +VF  M  
Sbjct: 283 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR-VHVKASRTE 339
            G  PNV +Y+ +I+  C+  ++ +A  +F EM +    PN++T+N LM   HV   R +
Sbjct: 343 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHV--GRLQ 400

Query: 340 KVLQVYNQMKRLGCEADTITYNFL-----------------------------------I 364
             + ++++M   G   D  TY  L                                   I
Sbjct: 401 DAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVI 460

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  C+ G+LE A  + +++  KG  PN  T+ ++   + + G ++ A++++ +M    C 
Sbjct: 461 DGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCS 520

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           P+  TYN + Q    +K     ++L +EM       +V+T  +L+ M C
Sbjct: 521 PDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 121/229 (52%), Gaps = 3/229 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+++ D A +  + M  + +     T++ L+      G   +A+  F+ M 
Sbjct: 352 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMV 410

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
            +G  PD   + I++  LC+K    EA +   +++    +PD+ +YT ++ G CRAG + 
Sbjct: 411 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 470

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  +   G++PNV TY+I+I+ LCR G +  A+ +F EM   GC P+  T+N + 
Sbjct: 471 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 530

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           +  ++     + +Q+  +M   G  AD  T   L++  C D KL+ ++K
Sbjct: 531 QGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD-KLDQSVK 578



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 36/279 (12%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P  + +  L+    +         +  +M   GI P+VYT +I+I++ C   ++  A  V
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L                                   +LG + DT T+  LI   C 
Sbjct: 127 LAKIL-----------------------------------KLGHQPDTATFTTLIRGLCV 151

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +GK+ DA+ + + M+ +G  PN  T+  +   + K+G+ N A R+   M+   C+P+ V 
Sbjct: 152 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 211

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  ++      +       L  +M    + P++ TY  LI   C +  W +    + +MI
Sbjct: 212 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 271

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             K + P   ++  V+  L + G++ +  ++V+ M+ RG
Sbjct: 272 NSK-IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 309



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 4/204 (1%)

Query: 330 RVHVKA---SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           R H K+   +  +  L  +N+M  +     T+ +N L+    K  +      + N M   
Sbjct: 39  RFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSF 98

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  P+  T N++      L  +  A  +  K+  L  +P+T T+  L++           
Sbjct: 99  GIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDA 158

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L L  +M     +PNV TY  LI   C +G+ N A + +R M +  C +P   VY  ++ 
Sbjct: 159 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNC-QPDVVVYTSIID 217

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +  Q+ +   L  KMV +G +
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGIS 241


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K   ++ A   +D M    +     TF+ ++    R     EA   FN M 
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML 356

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD I+FS ++ +  R      A ++F+ +K     PD ++YT L+ G+CR  ++S
Sbjct: 357 QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++  EM   G   +V TY+ +++ LCR   +  A ++F EM+E G  P+  T   L+
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLI 476

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K     K L ++  M     + D +TYN L+D  CK G++E A ++   M+ +   
Sbjct: 477 HGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIF 536

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  +F+++      LG V+ A R++ +MK+   +P  VT N +++ +  + +       
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 596

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    V P+  TY  LI  +    +++ A+  I  M EE+ L P    Y  +L    
Sbjct: 597 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM-EERGLLPNLVTYNAILGGFS 655

Query: 510 RAGQLQKHEELVEKMVDRG 528
           R G++Q+ E ++ KM+D+G
Sbjct: 656 RHGRMQEAEMVLHKMIDKG 674



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 186/406 (45%), Gaps = 39/406 (9%)

Query: 160 KVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           KV   DLAW  + D +KS N+ + V T +I+V    + G         + MEE G   D 
Sbjct: 201 KVGWVDLAWKVYEDFVKSGNI-VNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADL 259

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAG----------- 266
           + ++ +++  CR+   SEA    D +  K  +P +  Y  L+ G C+ G           
Sbjct: 260 VTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDE 319

Query: 267 ------------------------NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
                                   ++ EAERVF EM   G+ P++ ++S ++    R G+
Sbjct: 320 MLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGE 379

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + RA   F +M  VG  P+++ +  L+  + +       L++ N+M   GC  D +TYN 
Sbjct: 380 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 439

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L++  C+   L+DA ++   MV +G  P+  T   +     K G++  A  ++  M    
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 499

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            +P+ VTYN LM  F      +   +L  +M   E+ P+  ++ ILI  +C +G  + A+
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAF 559

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   EM +EK +KP       +++   RAG L K  + +  M+  G
Sbjct: 560 RLWDEM-KEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 183/374 (48%), Gaps = 11/374 (2%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           A K+R+   A+    L++ R   ++++  + L+   V+ G    A   +    + G   +
Sbjct: 167 ARKLREGSEAFQ---LLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVN 223

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
               +I+++ LC+  +      +   +++K    D++ Y  LV  +CR G +SEA  +  
Sbjct: 224 VYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVD 283

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            M   G++P ++TY+ +I+ LC+ G   RA  V  EML VG  PN+ TFN ++   V++ 
Sbjct: 284 CMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML---VESC 340

Query: 337 RTEKVLQ---VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           R E V +   V+N+M + G   D I+++ ++    ++G+L  A+     M   G  P+  
Sbjct: 341 RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV 400

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            + ++     +  DV+GA +M  +M +  C  + VTYN L+      K  D   +L KEM
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            E  V P+  T   LI  YC  G+   A   + E +  + LKP    Y  ++    + G+
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALS-LFETMTLRSLKPDVVTYNTLMDGFCKVGE 519

Query: 514 LQKHEELVEKMVDR 527
           ++K +EL   M+ R
Sbjct: 520 MEKAKELWYDMISR 533



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 174/349 (49%), Gaps = 9/349 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  ++ +  +  +   A  + + MK   +      ++IL+  Y R    + A+  
Sbjct: 362 PDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKM 421

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N M E GC  D + ++ +++ LCR +   +A   F  + ++   PD    T L+ G+C+
Sbjct: 422 RNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCK 481

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GN+++A  +F  M +  ++P+V TY+ ++D  C+ G++ +A +++ +M+     P+ I+
Sbjct: 482 DGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYIS 541

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           F+ L+          +  +++++MK  G +   +T N +I  + + G L  A   LN+M+
Sbjct: 542 FSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMI 601

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS---K 441
            +G  P+  T+N +     K  + + A  +   M++    PN VTYN ++  F+     +
Sbjct: 602 SEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQ 661

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             +MVL    +M +  + P+ +TY  LI  Y    +   A++   EM++
Sbjct: 662 EAEMVL---HKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ 707



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 3/317 (0%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD     I + G  R  D+  A    + M  R   + V T++ L+    R  +  +A   
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL 456

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M E G  PD    + +I   C+    ++A S F+++  +  +PDV+ Y  L+ G+C+
Sbjct: 457 FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +A+ ++ +M    I P+  ++SI+I+  C  G ++ A  ++ EM E G +P  +T
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            N +++ +++A    K     N M   G   D ITYN LI+   K+   + A  ++N+M 
Sbjct: 577 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNME 636

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  PN  T+N I    S+ G +  A  +  KM D    P+  TY  L+  + +  +  
Sbjct: 637 ERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMK 696

Query: 445 MVLKLKKEMEENEVEPN 461
              ++  EM +    P+
Sbjct: 697 EAFRVHDEMLQRGFVPD 713



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 36/312 (11%)

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           V+V+  L+R + +A  + E    F+ ++  G   ++   + ++ A+ + G +  A  V+ 
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH---- 367
           + ++ G   N  T N ++    K  + + V    ++M+  G  AD +TYN L++ +    
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 368 -------------------------------CKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
                                          CK+G  E A +VL+ M+  G  PNA+TFN
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +     +  DV  A R++ +M      P+ ++++ ++ +F+ +      L   ++M+  
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P+   Y ILI  YC     + A K   EM+E  C+    + Y  +L  L R   L  
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVT-YNTLLNGLCRGKMLDD 452

Query: 517 HEELVEKMVDRG 528
            +EL ++MV+RG
Sbjct: 453 ADELFKEMVERG 464


>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 410

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 5/375 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           Q L  F ++    E+         +I++ G+  +  LA    + M    V  +V  ++ L
Sbjct: 12  QALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTAL 71

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR--RASEAQSFFDSLKDK 247
           +  Y + GL  EA   F  M+E GC+P+ + ++ +I+  C KR  R  +    F+ +K  
Sbjct: 72  LSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINA-CTKRAYRLPDLVGLFEEMKQA 130

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             +P+ I Y  +V           A ++ +EMK     PNV +Y+ +I++L R G++  A
Sbjct: 131 GVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEA 190

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            ++F EM E+G  PNS T+N+L++ + +  R EK + ++  M+  GC  D  TYN +ID 
Sbjct: 191 VELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDM 250

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             + G   +A  V   M RKGC P+  T+N +    SK      A  +   MK   C P+
Sbjct: 251 CGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPD 310

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TYNIL+     + S    +++  E++     PN+ ++  LI MY  +G++  A +   
Sbjct: 311 LWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWV 370

Query: 487 EMIEEKCLKPGSSVY 501
           EM    C+ P ++ Y
Sbjct: 371 EMRATGCV-PNATAY 384



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 164/346 (47%), Gaps = 11/346 (3%)

Query: 98  FSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMI 155
           F  +S A  ++PS   +    S   + G+ L +  + F    A  E   SP++  Y+ +I
Sbjct: 53  FEGMSKA-GVAPSVHAYTALLSGYAKQGL-LKEAWALFE---AMKEKGCSPNVLTYNTLI 107

Query: 156 NLAGK--VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           N   K   R  DL   F + MK   V+    T++ +V   V   L   A      M+   
Sbjct: 108 NACTKRAYRLPDLVGLFEE-MKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVN 166

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P+ I+++ +I+ L R  R  EA   F+ +K+    P+   Y +L++ + R G   +A 
Sbjct: 167 CLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAM 226

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F  M+  G  P++YTY+ VID   R G    A  VF EM   GC P+ +T+N ++  +
Sbjct: 227 CLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAY 286

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K SR  +   +   MKR GC  D  TYN L+D   K G   +A+++ + +   G +PN 
Sbjct: 287 SKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNL 346

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            +F+ +     +LG    A R + +M+   C PN   Y  LM  ++
Sbjct: 347 VSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYS 392



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 5/243 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           Q+L     V   P  +     Y  MIN  G+  + D A    + MK         T++ L
Sbjct: 157 QILKEMKAVNCLPNVIS----YTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSL 212

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           ++ Y R G   +A+  F  ME+ GC PD   ++ VI +  R    +EA+  F  ++ K  
Sbjct: 213 LKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGC 272

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD + Y  ++  + +      A  + + MK AG  P+++TY+I++DA  + G  + A  
Sbjct: 273 TPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQ 332

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F E+   G  PN ++F+ L+ ++ +    E+  + + +M+  GC  +   Y  L++ + 
Sbjct: 333 IFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYS 392

Query: 369 KDG 371
             G
Sbjct: 393 HHG 395



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 8/190 (4%)

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +++  M + G       Y  L+  + K G L++A  +  +M  KGC+PN  T+N +    
Sbjct: 51  EIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINAC 110

Query: 403 SK----LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
           +K    L D+ G   ++ +MK    +PN +TYN ++         D   ++ KEM+    
Sbjct: 111 TKRAYRLPDLVG---LFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNC 167

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            PNV +Y  +I      G  + A +   EM +E    P S  Y  +L+   R G+ +K  
Sbjct: 168 LPNVISYTTMINSLGRSGRLDEAVELFEEM-KELGRSPNSWTYNSLLKAYAREGRYEKAM 226

Query: 519 ELVEKMVDRG 528
            L   M D G
Sbjct: 227 CLFVGMEDEG 236



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 4/162 (2%)

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           ++GKL  A ++   M + G  P+   +  +    +K G +  A  ++  MK+  C PN +
Sbjct: 42  REGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVL 101

Query: 429 TYNILMQMFATSKSTDM--VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           TYN L+    T ++  +  ++ L +EM++  V+PN  TY  ++     +  ++ A + ++
Sbjct: 102 TYNTLINA-CTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILK 160

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           EM    CL P    Y  ++  L R+G+L +  EL E+M + G
Sbjct: 161 EMKAVNCL-PNVISYTTMINSLGRSGRLDEAVELFEEMKELG 201


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 174/347 (50%), Gaps = 2/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ ++  Y ++G+  EA          G  PD++ +  +I+ LC +     A   F+  
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + K  +PD++VY +LV+G CR G I  A +V  EM   G  P+++TY+I+I+ LC+ G I
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  V  + +  G  P+  TFN L+  + K  + +  LQ+  +M   G   D ITYN +
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++  CK GK ++  +    M+ KGC PNA T+N++     K+  +  A  +  +M     
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ V++N L+  F  +   D    L ++++E       +T+ ILI  Y    +   A K
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              EMI  K  KP    Y +++  L +A  + +    + +M+ +GF 
Sbjct: 617 IFGEMIS-KGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFV 662



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 175/345 (50%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDS 243
           T+  L+      G    A+  FN  +     PD + ++ ++  LCR+     A Q   + 
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 411

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +++   PD+  Y  ++ G C+ GNIS+A  V  +  + G  P+V+T++ +ID  C+  ++
Sbjct: 412 VEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL 471

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +   M   G  P+ IT+N+++    KA + ++V + + +M   GC  + ITYN L
Sbjct: 472 DSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 531

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK  +LE+A  V+  M + G  P+A +FN +     + GD++GA+ ++ K+ +   
Sbjct: 532 IENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 591

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
                T+NIL+  +++  +  M  K+  EM     +P++ TYRIL+   C   + + AY 
Sbjct: 592 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYA 651

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ EMI  K   P  + +  +L  L    ++ +   ++  MV  G
Sbjct: 652 HLAEMI-SKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMG 695



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 175/364 (48%), Gaps = 1/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A H  D M  R+V   V TF+ ++    + G   E+     ++ + G + +K   +I I 
Sbjct: 195 ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIR 254

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            LC   R  EA +  + +     PDV+ Y  L+RG C+   + EA +    M   G  P+
Sbjct: 255 GLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPD 314

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
            +TY+ +ID  C+ G +  A ++  + +  G  P+ +T+ +L+         E+ L+++N
Sbjct: 315 DFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFN 374

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           + +    + D + YN L+   C+ G +  A++V+N MV +GC+P+  T+N+I   + K+G
Sbjct: 375 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMG 434

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +++ A  +          P+  T+N L+  +      D  L+L + M    + P+V TY 
Sbjct: 435 NISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYN 494

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++   C  G      +   EMI + C +P +  Y ++++   +  QL++   ++ +M  
Sbjct: 495 SVLNGLCKAGKAKEVNETFEEMILKGC-RPNAITYNILIENFCKINQLEEASGVIVRMCQ 553

Query: 527 RGFT 530
            G  
Sbjct: 554 DGLV 557



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 163/348 (46%), Gaps = 2/348 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF- 241
           V T++ L+R   +     EA     RM   GC PD   ++ +I   C+     EA     
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           D++   F PD + Y +L+ G C  G+I  A  +F E +   ++P++  Y+ ++  LCR G
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 399

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            I  A  V  EM+E GC P+  T+N ++    K         V N     G   D  T+N
Sbjct: 400 LILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 459

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID +CK  KL+ A++++  M   G  P+  T+N +   + K G     +  + +M   
Sbjct: 460 TLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILK 519

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C PN +TYNIL++ F      +    +   M ++ + P+  ++  LI  +C  G  + A
Sbjct: 520 GCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGA 579

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y   +++ +EK     +  + +++        +Q  E++  +M+ +G+
Sbjct: 580 YLLFQKL-DEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGY 626



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 163/329 (49%), Gaps = 1/329 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y  +IN        + A    +  ++++++  +  ++ LV+   R GL   A+
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 405

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
              N M E GC PD   ++I+I+ LC+    S+A     D++   + PDV  +  L+ G+
Sbjct: 406 QVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY 465

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+   +  A ++   M   GI P+V TY+ V++ LC+ G+    ++ F EM+  GC PN+
Sbjct: 466 CKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 525

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+N L+    K ++ E+   V  +M + G   D +++N LI   C++G L+ A  +   
Sbjct: 526 ITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +  KG +  A TFN++    S   ++  A +++G+M     +P+  TY IL+     + +
Sbjct: 586 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAAN 645

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITM 471
            D       EM      P++ T+  ++ +
Sbjct: 646 VDRAYAHLAEMISKGFVPSMATFGRMLNL 674



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 9/361 (2%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M +  V     T ++ ++ +   G    A+     + E GC     A+  V+  L     
Sbjct: 132 MLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGH 191

Query: 234 ASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
              A+  FD +  +D F PDV  + N++   C+ G++ E+  +  ++   G+  N +T +
Sbjct: 192 GYNARHLFDEMLGRDVF-PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCN 250

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           I I  LC  G++  A     E +     P+ +T+N LMR   K S+ ++  Q   +M   
Sbjct: 251 IWIRGLCEDGRLEEAV-ALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           GC  D  TYN +ID +CK G L++A ++L   V KG  P+  T+  +   +   GD+  A
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369

Query: 412 HRMY--GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             ++   + KDLK  P+ V YN L++           L++  EM E    P++ TY I+I
Sbjct: 370 LELFNEAQAKDLK--PDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIII 427

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              C MG+ ++A   + + I +  L P    +  ++    +  +L    +LVE+M   G 
Sbjct: 428 NGLCKMGNISDAAVVMNDAIVKGYL-PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486

Query: 530 T 530
            
Sbjct: 487 A 487



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 4/313 (1%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI--VYTNLVRGWCRAGNISEAERVFRE 277
           A+  +I  L    R  +  +   S +    PD +  +Y   ++ + RAG +  A   F  
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M +    P    Y+ ++DAL       +AH V+  ML  G  P++ T    ++      R
Sbjct: 97  MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
               L++   +   GC+A    Y  ++      G   +A  + + M+ +   P+ +TFN 
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + + GDV  +  +  K+       N  T NI ++        +  + L + M    
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA-Y 275

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V P+V TY  L+   C       A +Y+  M+ + C+ P    Y  ++    ++G LQ+ 
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI-PDDFTYNTIIDGYCKSGMLQEA 334

Query: 518 EELVEKMVDRGFT 530
            EL++  V +GF 
Sbjct: 335 TELLKDAVFKGFV 347



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 38/243 (15%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++  + +I+   K  + D A   ++ M +  +   V T++ ++    +AG A E    
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           F  M   GC P+ I ++I+I   C+  +  EA      + +D   PD + +  L+ G+CR
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCR 572

Query: 265 AG-----------------------------------NISEAERVFREMKMAGIQPNVYT 289
            G                                   N+  AE++F EM   G +P++YT
Sbjct: 573 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 632

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y I++D LC+   + RA+   AEM+  G  P+  TF  ++ +     R  + + + + M 
Sbjct: 633 YRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMV 692

Query: 350 RLG 352
           R+G
Sbjct: 693 RMG 695


>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 490

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 190/401 (47%), Gaps = 13/401 (3%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMK-SRNVEITVDTFSI 188
           FF W   +  + H P  Y+EMI++      K +QF +    +D MK ++   +  D    
Sbjct: 43  FFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNKKTVVPADILLE 102

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R+Y    L      A  +       P+  AF++++  LC+     E ++    ++ + 
Sbjct: 103 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRV 162

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PD   +  L  GWCR  +  +A ++  EM  AG +P  +TY   ID  C+ G +  A D
Sbjct: 163 KPDATTFNVLFFGWCRVRDPKKAMKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAAD 222

Query: 309 VFAEMLEVGC---EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +F  M+  G     P + TF  ++    K  + E+  ++  +M   GC  D  TY  +I+
Sbjct: 223 LFEFMITKGSVVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIE 282

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C  GK+E+A K L+ M  KG  P+  T+N   R + +    + A ++YG+M + +C P
Sbjct: 283 GMCMAGKVEEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAP 342

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK-- 483
           +  TYN+L+ MF      D      KEM+E +   ++ TY ++I    G+   + A +  
Sbjct: 343 SVQTYNMLISMFFEMDDPDGAFNTWKEMDERDCVQDIETYCVMIN---GLFDCHRAKEAC 399

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           ++ E +  K LK     ++  L +L   G L+   +L E M
Sbjct: 400 FLLEEVVNKGLKLPYRAFDSFLMRLSTVGNLKAIHKLSEHM 440



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 35/295 (11%)

Query: 134 FFNWVTAR-PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           FF W   R P+   +  L  EMI    K   F                    T+   +  
Sbjct: 173 FFGWCRVRDPK--KAMKLLEEMIQAGHKPENF--------------------TYCAAIDT 210

Query: 193 YVRAGLAAEAVHAFNRMEEYGC---APDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           + +AG+  EA   F  M   G    AP    F+++I  L +  +A E       +     
Sbjct: 211 FCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 270

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDV  Y +++ G C AG + EA +   EM   G  P++ TY+  +  LC   +   A  
Sbjct: 271 LPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKSDEALK 330

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY----NFLI 364
           ++  M+E  C P+  T+N L+ +  +    +     + +M    C  D  TY    N L 
Sbjct: 331 LYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWKEMDERDCVQDIETYCVMINGLF 390

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           DCH    + ++A  +L  +V KG       F+     +S +G++   H++   MK
Sbjct: 391 DCH----RAKEACFLLEEVVNKGLKLPYRAFDSFLMRLSTVGNLKAIHKLSEHMK 441



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 23/246 (9%)

Query: 290 YSIVIDAL---CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + IVID L    R  +     D+  E+L   CE            HV+     K ++V  
Sbjct: 77  FRIVIDMLDYMKRNKKTVVPADILLEILRKYCER--------YLTHVQKFAKRKRIRVKT 128

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           Q        +   +N L+D  CK G +++   +L  M R    P+A+TFN++F    ++ 
Sbjct: 129 Q-------PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDATTFNVLFFGWCRVR 180

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM-EENEV--EPNVN 463
           D   A ++  +M     +P   TY   +  F  +   D    L + M  +  V   P   
Sbjct: 181 DPKKAMKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAK 240

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           T+ ++I            ++ I  MI   CL P  S Y+ V++ +  AG++++  + +++
Sbjct: 241 TFALMIVALAKNDKAEECFELIGRMISTGCL-PDVSTYKDVIEGMCMAGKVEEAYKFLDE 299

Query: 524 MVDRGF 529
           M ++G+
Sbjct: 300 MSNKGY 305


>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 185/367 (50%), Gaps = 9/367 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L   MI+  G++ + +LA    +   S     TV  FS L+  Y ++G   EA+  F  M
Sbjct: 189 LASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESM 248

Query: 210 EEYGCAPDKIAFSIVISILCRK-----RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
           +  G  P+ + ++ VI   C K     +R  E   F + L++  +PD I Y +L+    R
Sbjct: 249 KVSGLKPNLVTYNAVIDA-CGKGGVEFKRVVEI--FEEMLRNGVQPDRITYNSLLAVCSR 305

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G    A  +F EM   GI  +V+TY+ ++DA+C+ GQ+  A+++  EM      PN +T
Sbjct: 306 GGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVT 365

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ +   + KA R E  L +YN+MK LG   D ++YN L+  + K G+ EDA+KV   M 
Sbjct: 366 YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMG 425

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G   +  T+N +     K G  N   R++ +MK  +  PN +TY+ L+ +++     +
Sbjct: 426 SSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYE 485

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             +++ +E ++  ++ +V  Y  LI   C  G  ++A   + EM +E  ++P    Y  +
Sbjct: 486 EAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEG-IRPNVVTYNSI 544

Query: 505 LQQLRRA 511
           +    R+
Sbjct: 545 IDAFGRS 551



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 169/381 (44%), Gaps = 41/381 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA-AEAVHAFNRM 209
           +  +I+  GK   FD A    + MK   ++  + T++ ++    + G+     V  F  M
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
              G  PD+I ++ ++++  R      A++ F+ + D+  + DV  Y  L+   C+ G +
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQM 344

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  +  EM    I PNV TYS + D   + G++  A +++ EM  +G   + +++N L
Sbjct: 345 DLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTL 404

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + ++ K  R E  L+V  +M   G + D +TYN L+D + K GK  +  +V   M +   
Sbjct: 405 LSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRV 464

Query: 389 NPNASTFNM----------------IFR-------------------CISKLGDVNGAHR 413
            PN  T++                 +FR                    + K G V+ A  
Sbjct: 465 FPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVL 524

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M      PN VTYN ++  F  S + + +  +      NE +    ++ ++  +  
Sbjct: 525 LLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFL--VDGVGASNERQSESPSFMLIEGVDE 582

Query: 474 GMGHWNNA--YKYIREMIEEK 492
              +W++   +K+ ++++ EK
Sbjct: 583 SEINWDDGHVFKFYQQLVSEK 603



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 42/275 (15%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+L  Y  +I++  K   ++ A       K   ++  V  +S L+    + GL   AV  
Sbjct: 466 PNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLL 525

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRK--------------RRASEAQSFF-----DSLKD 246
            + M + G  P+ + ++ +I    R                R SE+ SF      D  + 
Sbjct: 526 LDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEI 585

Query: 247 KFEPDVIV--YTNLV---RGWCRAGNISEAE-----RVFREMKMAGIQPNVYTYSIVIDA 296
            ++   +   Y  LV    G  +   + + E      VF++M    I+PNV T+S +++A
Sbjct: 586 NWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNA 645

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM----RVHVKASRTEKVLQVYNQMKRLG 352
             RC  I  A  +  E+     +   +    LM     V ++A        +++++K++ 
Sbjct: 646 CSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQ------YLFDEVKQMD 699

Query: 353 CEADTITYNFLIDCHCKDGKLEDA-IKVLNSMVRK 386
               +  YN L D     G+   A + VL    RK
Sbjct: 700 SSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRK 734


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 3/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T ++ VRR   AG    A+    R  + G    D  A + ++   CR    +EAQ  FD 
Sbjct: 4   TTAVAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDV 63

Query: 244 L-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + +    P+ + +T L+ G+   G   +   +F +M++ GI+PN+YTY+I++   CR G+
Sbjct: 64  MPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGE 123

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
             RA  +F EM   G   N +++N L+    +  + +   Q+   M+R G     +T+N 
Sbjct: 124 FERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNL 183

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+D + K GK+ +A+   N M   G  P+A T+N +     +  D+  A+R +  MK+  
Sbjct: 184 LVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERG 243

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P  VTY IL+  FA     D   ++   ME+  +E +V TY +L+   C  G+  +A 
Sbjct: 244 LAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDAR 303

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           K  +  I EK L+ G+ +Y+M++    R G   K  +L+ +M  +GF
Sbjct: 304 KLFQS-IGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGF 349



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 163/355 (45%), Gaps = 2/355 (0%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           K+ +  + V   + LV  Y R+G  AEA   F+ M   G  P+++ F+ +I       R 
Sbjct: 30  KAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRR 89

Query: 235 SEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            +  + F+ ++    EP++  Y  LV  WCR G    A  +F EM   GI  NV +Y+ +
Sbjct: 90  EKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTL 149

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  LCR  ++  A  +   M   G  P+ +TFN L+  + KA +    L   NQM+  G 
Sbjct: 150 IAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGY 209

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           +   +TYN LI   C+   +  A +  + M  +G  P   T+ ++    ++  D++ A  
Sbjct: 210 QPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFE 269

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           M+  M+    E +  TY +L+       +     KL + + E  ++     Y +LI  Y 
Sbjct: 270 MFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYG 329

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             G    A K I EM  +K   P S+ Y + ++ L   G+  + E L++ MV  G
Sbjct: 330 REGSSYKAMKLIMEM-RKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAG 383



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 162/347 (46%), Gaps = 2/347 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D+M    +     TF+ L+  Y   G   + +  F +M   G  P+   ++I++ 
Sbjct: 57  AQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVG 116

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR      A+  F+ +  K    +V+ Y  L+ G CR   + +A ++   M+  GI+P
Sbjct: 117 EWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRP 176

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V T+++++D   + G+++ A     +M   G +P+++T+N L+    +A    +  + +
Sbjct: 177 SVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAF 236

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + MK  G     +TY  LID   ++  ++ A ++   M + G   +  T+ ++   +   
Sbjct: 237 SDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCME 296

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G++  A +++  + +   +   V Y++L+  +    S+   +KL  EM +    PN  +Y
Sbjct: 297 GNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASY 356

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
            + I + C  G  + A   I +M+    ++   SV +++L    R G
Sbjct: 357 GLTIRILCNDGKCSEAEALIDDMVRAG-VQTSESVRQVLLNAKARQG 402



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 132/257 (51%), Gaps = 1/257 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    + R+   A   ++LM+   +  +V TF++LV  Y +AG  + A+H  N+M 
Sbjct: 146 YNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMR 205

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P  + ++ +I+  CR R    A   F  +K++   P  + YT L+  + R  ++ 
Sbjct: 206 MAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMD 265

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F  M+ AG++ +V TY +++ ALC  G +  A  +F  + E G +  ++ ++ L+
Sbjct: 266 KAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLI 325

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + +   + K +++  +M++ G   ++ +Y   I   C DGK  +A  +++ MVR G  
Sbjct: 326 YGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQ 385

Query: 390 PNASTFNMIFRCISKLG 406
            + S   ++    ++ G
Sbjct: 386 TSESVRQVLLNAKARQG 402



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 7/275 (2%)

Query: 104 AHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           A  I+ + V +  +I   C  R      Q+L        RP  V     ++ +++  GK 
Sbjct: 136 AKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVT----FNLLVDGYGKA 191

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
            +   A HF + M+    + +  T++ L+  + RA     A  AF+ M+E G AP K+ +
Sbjct: 192 GKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTY 251

Query: 222 SIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           +I+I    R+    +A   F  + K   E DV  Y  LV   C  GN+ +A ++F+ +  
Sbjct: 252 TILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGE 311

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G+Q     Y ++I    R G   +A  +  EM + G  PNS ++   +R+     +  +
Sbjct: 312 KGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSE 371

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
              + + M R G +        L++   + G   D
Sbjct: 372 AEALIDDMVRAGVQTSESVRQVLLNAKARQGSPTD 406


>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 169/357 (47%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           ++ FFNW   +P      D Y+ +I   G+ +  +     +  M  + +    +T SI++
Sbjct: 149 MVXFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFXVXVLKDMHIQGISPNYETLSIVM 208

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             +++A   ++A+  F  +EE+G   D  + ++++  LC++     A  FF+++K     
Sbjct: 209 DSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPF 268

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           + + Y  ++ GW + G I E ER  + M   G  PN  T+S +I+ L R G+I  A +VF
Sbjct: 269 NCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVF 328

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
             M E GC PN+  +N L+   +     ++ L+ YN M    C+ +  TY  LI    K 
Sbjct: 329 HHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKA 388

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            K+ DA+++L+ MV +G  P           + + G  + A  +Y K + + C  +   Y
Sbjct: 389 RKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAY 448

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            +L+   +      M+L L  EM+E+    +   Y  +I   C +G  + A   + E
Sbjct: 449 KLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEE 505



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 2/251 (0%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           +K   I  +V TY+++I AL R   I     V  +M   G  PN  T + +M   +KA +
Sbjct: 157 VKQPTIPKDVDTYNVIIKALGRRKFIEFXVXVLKDMHIQGISPNYETLSIVMDSFIKARQ 216

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             K ++++  ++  G + DT + N L+ C C+   +  A    N+M + G   N  T+N+
Sbjct: 217 VSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAM-KGGIPFNCMTYNI 275

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           I    SK G +    R    M      PN +T++ L++    +   D  +++   MEE  
Sbjct: 276 IIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETG 335

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
             PN   Y  LI+ +     ++   KY   M+   C  P    Y  ++    +A ++   
Sbjct: 336 CVPNACVYNALISNFISTRDFDECLKYYNFMVSSNC-DPNMDTYTKLIVAFLKARKVADA 394

Query: 518 EELVEKMVDRG 528
            E++++MV RG
Sbjct: 395 LEMLDEMVGRG 405



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TFS L+    RAG   +AV  F+ MEE GC P+   ++ +IS     R   E   +++ +
Sbjct: 307 TFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFM 366

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                +P++  YT L+  + +A  +++A  +  EM   G+ P     +  I+ LC+ G  
Sbjct: 367 VSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPP 426

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  ++ +  +VGC  +   +  L+    +  +   +L ++++M+  G  +DT  Y ++
Sbjct: 427 HAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYV 486

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           I+  C  G+L+ A+ V+   + KG  P+
Sbjct: 487 INGLCNIGQLDTAVLVMEESLXKGFCPS 514


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 3/346 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+SIL+  + R G       AF  + + G   + I  S ++  LC  +R  EA       
Sbjct: 92  TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151

Query: 245 KDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
             +F   PDV+ Y  ++ G+ R G + +A  +F EM   GI PNV TY+ VID LC+   
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + RA  VF +M++ G +P++ T+N L+  ++   + ++V+Q+  +M   G E D ITY  
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+D  CK+G+  +A    +SM RKG  P+ + + ++    +  G ++  H     M    
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             PN   +NI+   +A     +  + +  +M +  + P+V ++  LI   C +G  ++A 
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               +MI E  + P   V+  ++  L   G+ +K EEL  +++D+G
Sbjct: 392 LQFNQMINEG-VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 180/422 (42%), Gaps = 39/422 (9%)

Query: 143 EFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           EF   PD+  Y+ +IN   +  Q + A++    M  + +   V T++ ++    +A +  
Sbjct: 154 EFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVD 213

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
            A   F +M + G  PD   ++ +I       +  E     + +     EPD I Y  L+
Sbjct: 214 RAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLL 273

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
              C+ G   EA   F  M   GI+P+V  Y+I++      G ++  H     M+  G  
Sbjct: 274 DYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVS 333

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN   FN +   + K +  E+ + ++N+M++ G   D +++  LID  CK G+++DA+  
Sbjct: 334 PNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393

Query: 380 LNSMVRKGCNPN-----------------------------------ASTFNMIFRCISK 404
            N M+ +G  PN                                   A  FN +   +  
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G V  A R+   M  +   PN ++YN L+     +   D   KL   M  N ++PN  T
Sbjct: 454 EGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFT 513

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y IL+  YC     ++AY   REM+  K + P  + Y  +L  L + G+  +  EL   M
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREML-MKGVTPVVATYNTILHGLFQTGRFSEANELYLNM 572

Query: 525 VD 526
           ++
Sbjct: 573 IN 574



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 182/374 (48%), Gaps = 7/374 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           G+ R+   A  F D M  + ++  V  ++IL+  Y   G  +E     + M   G +P++
Sbjct: 280 GRCRE---ARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNR 336

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             F+I+     +K    EA   F+ ++ +   PDV+ +  L+   C+ G + +A   F +
Sbjct: 337 RIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQ 396

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   G+ PN++ +S ++  LC  G+  +A ++F E+L+ G   +++ FN LM       R
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGR 456

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             +  ++ + M R+G   + I+YN L+  HC  G++++A K+L+ MV  G  PN  T+ +
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI 516

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN-ILMQMFATSKSTDMVLKLKKEMEEN 456
           + R   K   V+ A+ ++ +M      P   TYN IL  +F T + ++   +L   M  +
Sbjct: 517 LLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE-ANELYLNMINS 575

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
             + ++ TY I++   C     + A+K  R +   K  +  S  + +++  L + G+ + 
Sbjct: 576 RTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLC-SKDPQLDSVTFNIMIGALLKGGRKED 634

Query: 517 HEELVEKMVDRGFT 530
             +L   +   G  
Sbjct: 635 AMDLFATISAYGLV 648



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 171/376 (45%), Gaps = 5/376 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  +  +I+   K+ + D A    + M +  V   +  FS LV      G   +A  
Sbjct: 368 SPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEE 427

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWC 263
            F  + + G   D + F+ ++  LC + R  EAQ   D  ++    P+VI Y  LV G C
Sbjct: 428 LFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHC 487

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G I EA ++   M   G++PN +TY+I++   C+  ++  A+ +F EML  G  P   
Sbjct: 488 LTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVA 547

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N ++    +  R  +  ++Y  M     + D  TYN +++  CK+  +++A K+   +
Sbjct: 548 TYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL 607

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             K    ++ TFN++   + K G    A  ++  +      P+ VTY ++ +      S 
Sbjct: 608 CSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSL 667

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
                L   ME++   PN +    L+      G  + A  Y+ ++ +EK     +S   M
Sbjct: 668 GEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKL-DEKNFSLEASTTSM 726

Query: 504 VLQQLRRAGQLQKHEE 519
           ++    R G+ Q H +
Sbjct: 727 LISLYSR-GEYQPHAK 741



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 13/316 (4%)

Query: 227 ILCRKRRAS----EAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERV---FREM 278
           I  R R  S    EA   FD L     P  V  +  L+    RAG  S +ERV   F  M
Sbjct: 19  IASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRM 78

Query: 279 KM---AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
                + + PN  TYSI+I   CR G++      F  +L+ G   N I  + L++    A
Sbjct: 79  ARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDA 138

Query: 336 SRTEKVLQV-YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
            R ++   +   +M   GC  D + YN +I+   ++G++E A  +   M+ +G  PN  T
Sbjct: 139 KRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVT 198

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +  +   + K   V+ A  ++ +M D   +P+  TYN L+  + ++     V+++ +EM 
Sbjct: 199 YTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMS 258

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            + +EP+  TY +L+   C  G    A  +   M   K +KP  ++Y ++L      G L
Sbjct: 259 THGLEPDCITYALLLDYLCKNGRCREARLFFDSMF-RKGIKPDVAIYAILLHGYATKGAL 317

Query: 515 QKHEELVEKMVDRGFT 530
            +    ++ MV  G +
Sbjct: 318 SEMHSFLDLMVGNGVS 333


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 181/372 (48%), Gaps = 12/372 (3%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L +  + L+  R   + V   +I+++   R G   EA+     M     +PD ++++ +I
Sbjct: 127 LGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLI 186

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           + LC+ ++  EA      ++     P+ +  T L+ G C+ G + EA  +   MK  G  
Sbjct: 187 NGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFD 246

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
            +V  Y  +I   C  G + R  ++F EML  G   N +T++ L+    +  + ++   V
Sbjct: 247 ADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTV 306

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            N M   G   D +TY  LID  CKDG+   A+ +LN MV KG  P+  T+N++   + K
Sbjct: 307 LNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 366

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE--VEPNV 462
            G V  A ++   M +   + + VTYN LM+        D  LKL   M +NE  +EPNV
Sbjct: 367 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNV 426

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS----VYEMVLQQLRRAGQLQKHE 518
            T+ +LI   C  G    A K  R+M+     K GS      Y M+L    +AG++++  
Sbjct: 427 FTFNMLIGGLCKEGRLTKAVKIHRKMV-----KKGSCGNLVTYNMLLGGCLKAGKIKEAM 481

Query: 519 ELVEKMVDRGFT 530
           EL ++++D GF 
Sbjct: 482 ELWKQVLDLGFV 493



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 186/388 (47%), Gaps = 4/388 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           LY  +I+        D      D M  + +   V T+S LV    R G   EA    N M
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNI 268
            E+G  PD + ++ +I  LC+  RA+ A    + + +K  EP  + Y  L+ G C+ G +
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML--EVGCEPNSITFN 326
            +A ++ R M   G + +V TY+ ++  LC  G++  A  +F  M   E   EPN  TFN
Sbjct: 371 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 430

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    K  R  K ++++ +M + G   + +TYN L+    K GK+++A+++   ++  
Sbjct: 431 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 490

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN+ T++++     K+  +N A  ++ +M+     P    YN LM       S +  
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 550

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L +EM     EP++ ++  +I      G +    +   +M+E   L+P +  +  ++ 
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG-LRPDALTFSTLIN 609

Query: 507 QLRRAGQLQKHEELVEKMVDRGFTARPL 534
           +L + G+L + +  +E+MV  GFT   L
Sbjct: 610 RLSKLGELDEAKSALERMVASGFTPDAL 637



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 171/401 (42%), Gaps = 42/401 (10%)

Query: 114 HVIEKSCGVRHGIPLLQVLSFFNWV-TARPEFVHSPDL--YHEMINLAGKVRQFDLAWHF 170
           +V+  SC V HG+  L      N V  A  E    PD+  Y  +I+   K  +   A   
Sbjct: 283 NVVTYSCLV-HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           ++LM  +  E +  T+++L+    + GL  +A      M E G   D + ++ ++  LC 
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401

Query: 231 KRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCR----------------------- 264
           K +  EA   F+S+ D     EP+V  +  L+ G C+                       
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 461

Query: 265 ------------AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
                       AG I EA  +++++   G  PN +TYSI+ID  C+   +  A  +F E
Sbjct: 462 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 521

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   G  P    +N LM    K    E+   ++ +M    CE D I++N +ID   K G 
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            +   ++   MV  G  P+A TF+ +   +SKLG+++ A     +M      P+ + Y+ 
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           L++  ++   T  ++ L  +M       +      ++T  C
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 4/304 (1%)

Query: 228 LCRK--RRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           LC+K   + +EA S F S  D    P       LV    R+ N   A  V+R M    + 
Sbjct: 47  LCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVL 106

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+  + S +I+      +      V   +L+ G   N    N +++   +     + + +
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +M R     D ++YN LI+  CK  KL++A+ +L  M   GC PN+ T   +   + K
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G ++ A  +   MK    + + V Y  L+  F  + + D   +L  EM    +  NV T
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  L+   C +G W  A   +  M E   + P    Y  ++  L + G+     +L+  M
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHG-IHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345

Query: 525 VDRG 528
           V++G
Sbjct: 346 VEKG 349



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 110/225 (48%), Gaps = 6/225 (2%)

Query: 158 AGKVRQFDLAW-HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           AGK+++    W   +DL    N      T+SIL+  + +  +   A   F  M  +G  P
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSF----TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 529

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVF 275
               ++ +++ LC++    +A+S F  + +   EPD+I +  ++ G  +AG+    + + 
Sbjct: 530 ALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQ 589

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M   G++P+  T+S +I+ L + G++  A      M+  G  P+++ +++L++     
Sbjct: 590 MKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSK 649

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
             T +++ + +QM   G   D    + ++ C C   +  D +++L
Sbjct: 650 GDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 2/161 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M + N E  + +F+ ++   ++AG          +M E G  PD + FS +I+ L +   
Sbjct: 557 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 616

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA+S  + +    F PD +VY +L++G    G+ +E   +  +M   G   +    S 
Sbjct: 617 LDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 676

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN-LMRVH 332
           ++  LC   Q     ++     +   E  SI+ N  LM++H
Sbjct: 677 ILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLH 717



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 1/173 (0%)

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           T NFL+D   +      A  V   M      P+  + + +  C +          + G +
Sbjct: 76  TCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLV 135

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
                  N    NI+++    +      + L +EM    V P++ +Y  LI   C     
Sbjct: 136 LKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             A   + EM    C  P S     ++  L + G++ +  EL+E M  +GF A
Sbjct: 196 KEAVGLLLEMEAAGCF-PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDA 247


>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 185/367 (50%), Gaps = 9/367 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L   MI+  G++ + +LA    +   S     TV  FS L+  Y ++G   EA+  F  M
Sbjct: 189 LASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESM 248

Query: 210 EEYGCAPDKIAFSIVISILCRK-----RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
           +  G  P+ + ++ VI   C K     +R  E   F + L++  +PD I Y +L+    R
Sbjct: 249 KVSGLKPNLVTYNAVIDA-CGKGGVEFKRVVEI--FEEMLRNGVQPDRITYNSLLAVCSR 305

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G    A  +F EM   GI  +V+TY+ ++DA+C+ GQ+  A+++  EM      PN +T
Sbjct: 306 GGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVT 365

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ +   + KA R E  L +YN+MK LG   D ++YN L+  + K G+ EDA+KV   M 
Sbjct: 366 YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMG 425

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G   +  T+N +     K G  N   R++ +MK  +  PN +TY+ L+ +++     +
Sbjct: 426 SSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYE 485

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             +++ +E ++  ++ +V  Y  LI   C  G  ++A   + EM +E  ++P    Y  +
Sbjct: 486 EAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEG-IRPNVVTYNSI 544

Query: 505 LQQLRRA 511
           +    R+
Sbjct: 545 IDAFGRS 551



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 169/381 (44%), Gaps = 41/381 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA-AEAVHAFNRM 209
           +  +I+  GK   FD A    + MK   ++  + T++ ++    + G+     V  F  M
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
              G  PD+I ++ ++++  R      A++ F+ + D+  + DV  Y  L+   C+ G +
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQM 344

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  +  EM    I PNV TYS + D   + G++  A +++ EM  +G   + +++N L
Sbjct: 345 DLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTL 404

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + ++ K  R E  L+V  +M   G + D +TYN L+D + K GK  +  +V   M +   
Sbjct: 405 LSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRV 464

Query: 389 NPNASTFNM----------------IFR-------------------CISKLGDVNGAHR 413
            PN  T++                 +FR                    + K G V+ A  
Sbjct: 465 FPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVL 524

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M      PN VTYN ++  F  S + + +  +      NE +    T+ ++  +  
Sbjct: 525 LLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFL--VDGVGASNERQSESPTFMLIEGVDE 582

Query: 474 GMGHWNNA--YKYIREMIEEK 492
              +W++   +K+ ++++ EK
Sbjct: 583 SEINWDDGHVFKFYQQLVSEK 603



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 180/402 (44%), Gaps = 52/402 (12%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K  Q DLA+  +  M  + +   V T+S +   Y +AG   +A++ +N M+
Sbjct: 331 YNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMK 390

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-------DKFEPDVIVYTNLVRGWC 263
             G   D+++++ ++SI  +  R      F D+LK          + DV+ Y  L+ G+ 
Sbjct: 391 FLGIGLDRVSYNTLLSIYAKLGR------FEDALKVCKEMGSSGVKKDVVTYNALLDGYG 444

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G  +E  RVF+EMK   + PN+ TYS +ID   +      A +VF E  + G + + +
Sbjct: 445 KQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVV 504

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE---DAIKVL 380
            ++ L+    K    +  + + ++M + G   + +TYN +ID   +    E   D +   
Sbjct: 505 LYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGAS 564

Query: 381 NS--------MVRKGCNP------NASTFNMIFRCIS---------KLG--DVNGAHRMY 415
           N         M+ +G +       +   F    + +S         +LG  ++     ++
Sbjct: 565 NERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVF 624

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME--ENEVEPNVNTYRILITMYC 473
            KM +L+ +PN VT++ ++   +  KS +    L +E+   +N+V      Y +   +  
Sbjct: 625 KKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQV------YGVAHGLLM 678

Query: 474 GMGH--WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           G     W  A +Y+ + +++      S+ Y  +   L   GQ
Sbjct: 679 GFSENVWIQA-QYLFDEVKQMDSSTASAFYNALTDMLWHFGQ 719


>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Brachypodium distachyon]
          Length = 496

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 224/475 (47%), Gaps = 32/475 (6%)

Query: 74  NPNPSSNSNPS--------LN-PDFTIPSLS---LGFSQISTAHSISPSTVRHVIEKSCG 121
            P P++ S+PS        LN P  T+ + S   L  S ++ A ++ P+ V + + K   
Sbjct: 14  TPKPATTSSPSARQIAALVLNHPSSTLTTASARSLSASLLAVAPAL-PTPVANSVLKLLW 72

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ-FDLAWHFIDLMKSRNVE 180
             HG   L        + AR   V SP      ++L+ ++R    L    + L     + 
Sbjct: 73  -HHGPRALLFFHALLHLPARAHAV-SPCTIDLALDLSARLRHPRQLTNSILALFPRLRLP 130

Query: 181 ITVDTFSILVRRYV----RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
            T  TF IL  R+     R  +A     + +R   +  A D   F+ ++  L + R AS+
Sbjct: 131 FTPRTFPILFERFAASQRRPDIAVRLFLSLHR--SHRVAQDLPLFNSLLDALGKSRHASK 188

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           A S   +L+ +F PDV+ Y  L  GWCR  + S A  + R+M  +GI P   TY++++  
Sbjct: 189 AASLVRALERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKG 248

Query: 297 LCRCGQITRAHDVFAEMLEVG-----CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
             R GQ+  A + F +M + G     C+P+ +++  ++     A + +K  +++++M + 
Sbjct: 249 FFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKE 308

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           GC     TYN LI   CK G +EDA+ V + M+RK   PN  T+ ++ R +  +G ++ A
Sbjct: 309 GCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRA 368

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN-EVEPNVNTYRILIT 470
            ++  +MK+  CEP   TYN+L++        D  L L + M +  E  PN +TY I+I+
Sbjct: 369 MKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVIS 428

Query: 471 MYCGMGHWNN---AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
                    +   A + + EM+E   L P   +   VL  L   G  Q   +L+ 
Sbjct: 429 AMFVRKRAEDMAIAARMVMEMVERGYL-PRRFMLNRVLNGLMLTGNQQLSRDLLR 482



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+ VTYN L   +   K T   L L ++M E+ + P   TY +++  +   G   +A+ +
Sbjct: 202 PDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNF 261

Query: 485 IREMI-----EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             +M      +E C KP    Y  ++  L  AGQL K  +L ++M   G
Sbjct: 262 FLQMKKRGSKDENC-KPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEG 309


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 195/408 (47%), Gaps = 26/408 (6%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMK-SRNVEITVDTFSILVRRYVRAGLAAEAV 203
           S D+    I L G  K+R+   A+  ++LM+ +      V TFS L++    AG   +A 
Sbjct: 342 SADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAW 401

Query: 204 HAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--------------- 247
             + RM    G +P++  ++ ++  LC+   +   +  F+ + ++               
Sbjct: 402 EVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEV 461

Query: 248 -------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
                    P ++ Y  LV G  ++G + +A  +   M  +G+ P+V T++ V+D LC+ 
Sbjct: 462 DFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKE 521

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +I  AH+VF   LE GC PN +T++ L+    K ++ ++ LQ+  +M  LGC A+T+TY
Sbjct: 522 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 581

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + ++D   K G++EDA+ VL  M   GC P+A T+N +     K   +  A  +  +M +
Sbjct: 582 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 641

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
               P+ VTY  L      S   D  +++   M      PN  TY  ++   C  G    
Sbjct: 642 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 701

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A  Y  +M  ++ + P    Y  ++  L +AG++ +  E +E+M+  G
Sbjct: 702 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAG 749



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 183/421 (43%), Gaps = 41/421 (9%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  V     Y  +I+   +  + D     ++ M  R       T++ LV   +  G A 
Sbjct: 33  RPTVVT----YSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAK 88

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           EA     RM   GC P+ I F ++I  LC++     A    D + D+ F PDV ++T L+
Sbjct: 89  EAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLL 148

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
              C  G + EA   F+++ + G  P+  TY+ ++D L + G++  A  V   + E    
Sbjct: 149 HALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSS 208

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------- 372
           P   TF   +    KA       + ++ M + G   +T+TY+ LID  CK GK       
Sbjct: 209 PTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL 268

Query: 373 -------------------------LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
                                    LE+AI++L +M    C PN   FN +   + +   
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARR 325

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE-VEPNVNTYR 466
           V+ A  ++  MK+  C  + +TYNIL++     +      +  + M   E   PNV T+ 
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            LI   C  G  N A++    M+  + + P    Y  +L+ L +AG  ++ E+  E+M++
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445

Query: 527 R 527
           R
Sbjct: 446 R 446



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 181/409 (44%), Gaps = 39/409 (9%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +I+   K ++   A   +  M       +V T++ L     R+G   EAV   + M 
Sbjct: 616  YNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMA 675

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGNI 268
              GCAP+ I +S ++  LC+  R +EA  +F+ +   +   P VI Y+ L+ G C+AG I
Sbjct: 676  ARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRI 735

Query: 269  SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             EA      M  AG  P+V T+SI+I+ LC  G+I    ++F  M E GC+ +   +N +
Sbjct: 736  DEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAM 795

Query: 329  MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL--------------- 373
            +  +           +  +MK  G   +T+T+  +I   C + ++               
Sbjct: 796  INAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCR 855

Query: 374  ------------------EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
                              E A+++L +MV  G +P+A  +  +   + K G    A ++ 
Sbjct: 856  DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915

Query: 416  GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             +M+     P+  TY I++   + +K   +     +EM    ++P+   Y  LI  +C  
Sbjct: 916  QEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA 975

Query: 476  GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               ++A+K +R       ++P  ++Y  ++  L +     K  E++ +M
Sbjct: 976  DKVDDAWKLLR----SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREM 1020



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 138/266 (51%), Gaps = 7/266 (2%)

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           ++ Y  L+ G C+AG + +A   FR+    G +P V TYS VID LCR  ++ +   +  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM   GC PN++T+N L+   +   R ++   +  +M   GC  + IT+  +I   CK+G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           ++E A +V++ MV +G  P+     ++   + +LG V+ A   + ++  +   P+ VTYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 432 ILMQMFATS---KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            ++     +   ++  MVL+L   + E+   P V T+ I +      G+   AY++   M
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQL---LAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQL 514
             +  + P +  Y+ ++  L +AG+L
Sbjct: 238 -PQTGVSPNTVTYDALIDGLCKAGKL 262



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 183/427 (42%), Gaps = 56/427 (13%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  + + A+  +D M  R     V+  ++L+      G   EA   F ++   G  PD +
Sbjct: 118 KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++ ++  L +  R   A      L + F  P V  +T  V G  +AGN++ A   F  M
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDV------------FAEMLEVGCE------- 319
              G+ PN  TY  +ID LC+ G++  A  +            F+ +L   C+       
Sbjct: 238 PQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 320 ----------PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
                     PN + FN+LM    +A R ++  ++++ MK  GC AD ITYN L+   CK
Sbjct: 298 IQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCK 357

Query: 370 DGKLEDAIKVLNSMVR-KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK-CEPNT 427
             ++ +A + +  M R +GC+PN  TF+ + + +   G VN A  +Y +M  ++   PN 
Sbjct: 358 LRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNR 417

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENE---------------------VEPNVNTYR 466
            TY  L++    +  +  + +  ++M E E                       P + TY 
Sbjct: 418 FTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYN 477

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            L+T     G   +A   +  MIE   L P    +  VL  L +  ++     + ++ ++
Sbjct: 478 TLVTGLSKSGMVRDALGLLEFMIESG-LSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536

Query: 527 RGFTARP 533
           RG   RP
Sbjct: 537 RG--CRP 541



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 174/397 (43%), Gaps = 39/397 (9%)

Query: 163  QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYGCAPDKIAF 221
            +FD A   +D M +R       T+S +V    +AG   EA+  F +M  +   AP  IA+
Sbjct: 663  RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 722

Query: 222  SIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
            S +I  LC+  R  EA  F + + +    PDV+ ++ L+ G C AG I     +F  M  
Sbjct: 723  SALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAE 782

Query: 281  AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT---------------- 324
             G + ++Y Y+ +I+A C  G+ + A+ +  EM   G   N++T                
Sbjct: 783  RGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDE 842

Query: 325  -----------------FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
                             +N L+   V + R+E+ L++   M   G   D   Y  ++D  
Sbjct: 843  AVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGL 902

Query: 368  CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
             K G  E A K+L  M  +G +P+  T+ ++   +SK   +  A   + +M     +P+ 
Sbjct: 903  FKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDA 962

Query: 428  VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            + Y+ L+  F  +   D   KL   +  + +EP +  Y  ++   C     + A + IRE
Sbjct: 963  IVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIRE 1019

Query: 488  MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            M  + C +PG  ++  +       G++ +  +LV  +
Sbjct: 1020 MKSKNC-EPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 155/348 (44%), Gaps = 8/348 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L+    +AG   +A  AF +  ++G  P  + +S VI  LCR     +     + +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +   P+ + Y  LV      G   EA  +   M   G  P + T+ ++I  LC+ G+I
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  V  EM++ G  P+      L+    +  R ++    + Q+  +G   D +TYN +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D   K G+LE A  VL  +     +P   TF +    +SK G++ GA+  +  M     
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PNTVTY+ L+     +   D+ L L   + +   +  +  +  L+   C       A +
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            ++ M    C+ P    +  ++  L +A ++ +  EL + M + G +A
Sbjct: 300 LLKAM---PCV-PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSA 343



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 6/270 (2%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ MIN      +F  A+  ++ MK+  +     T  I+++         EAV  F+ + 
Sbjct: 792  YNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIP 851

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            E     D+I+++ +I+ L   RR+ +A     ++  D   PD   Y  ++ G  +AG+  
Sbjct: 852  ED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPE 909

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             A ++ +EM+  G  P++ TY+I+I  L +  Q+  A D F EML    +P++I +++L+
Sbjct: 910  VAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLI 969

Query: 330  RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                KA   +KV   +  ++  G E     Y+ ++D  CK+   + A++V+  M  K C 
Sbjct: 970  DAFCKA---DKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCE 1026

Query: 390  PNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
            P    +  +       G V+ A ++   ++
Sbjct: 1027 PGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 6/309 (1%)

Query: 148  PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            PD+  +  +IN      + D        M  R  +  +  ++ ++  Y   G  + A   
Sbjct: 752  PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYAL 811

Query: 206  FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
               M+ +G A + +   IVI  LC   R  EA S+F S+ +    D I Y  L+     +
Sbjct: 812  LEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCR-DEISYNTLITSLVAS 870

Query: 266  GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
                +A  + R M   G  P+   Y  V+D L + G    A  +  EM   G  P+  T+
Sbjct: 871  RRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTY 930

Query: 326  NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
              ++    KA +       + +M R   + D I Y+ LID  CK  K++DA K+L S   
Sbjct: 931  TIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS--- 987

Query: 386  KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
             G  P  + ++ +   + K    + A  +  +MK   CEP    +  L   +      D 
Sbjct: 988  SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDE 1047

Query: 446  VLKLKKEME 454
             +KL  +++
Sbjct: 1048 AVKLVNDLQ 1056


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 167/356 (46%), Gaps = 5/356 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK   +E  V T++IL++   +      A      M   GC PD+++++ +IS LC+  +
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             EA+     L   F P V VY  L+ G C+     EA ++  EM   GI PNV +Y+ +
Sbjct: 232 VKEARE----LAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I+AL   G +  +  V A+M   GC PN  TF +L++       + + L  +++M R G 
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + + YN L+   C    L DA+ V N M   GC PN  T++ +    +K GD++GA  
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  M    C PN V Y  ++ +   +   +    L + M+     PN  T+   I   C
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G G  + A K   +M    C  P ++ Y  +L  L +  +  +   LV+ M  RG 
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCF-PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 185/383 (48%), Gaps = 2/383 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN        +L+   +  M +R     + TF+ L++ +   G + EA+  ++RM 
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ +A++ ++  LC KR   +A S F+ ++ +   P+V  Y+ L+ G+ +AG++ 
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  V+  M   G  PNV  Y+ ++D LCR     +A+ +   M    C PN++TFN  +
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +    + R +  ++V++QM   GC  +T TYN L+D   KD +  +A  ++  M  +G  
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N  T+N I       G +  A  + GKM     +P+ +T NI++  +      ++ ++L
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +   +  P++  Y  LI+  C       A  Y+R M+ E  + P  + + ++++ L 
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEG-ISPNVATWNVLVRHLF 642

Query: 510 RAGQLQKHEELVEKMVDRGFTAR 532
                    + ++ ++  GF  R
Sbjct: 643 SNMGHSGAVQFLDAVLGSGFETR 665



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 129/294 (43%), Gaps = 8/294 (2%)

Query: 237 AQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           A  +F S+ +   F+   + Y  ++        +   + + ++MK+ GI  +   +  VI
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
            +  R G   +A   F  M +   +P    +N+++   +  +R + +  +Y+ MK+ G E
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            +  TYN L+   CK+ +++ A K+L  M  KGC+P+  ++  +   + KLG V  A  +
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
                 +   P+   YN L+       + +   +L  EM    ++PNV +Y  +I     
Sbjct: 239 -----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G+   +   + +M    C  P    +  +++     G   +  +  ++M+  G
Sbjct: 294 AGNVELSLAVLAKMFARGC-SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 210/449 (46%), Gaps = 41/449 (9%)

Query: 118  KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
            K   + +GIP    +  F+ +T +   +     Y  +IN   K R+  LA    + MK  
Sbjct: 1024 KGVWMENGIP--DAVQLFDEMTKKG-LLGDAKTYGILINGLCKARKTGLAIKLHEKMKG- 1079

Query: 178  NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
            N +  V T+ +++    + G+  EA+  F+ M   G  PD + +S ++  LCR  R  EA
Sbjct: 1080 NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 1139

Query: 238  QSFFDSLKDK------------------------------------FEPDVIVYTNLVRG 261
              FF  ++ +                                    F PD   +T L+ G
Sbjct: 1140 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 1199

Query: 262  WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             C+ G + EA+++   M+  G +P++ TY+ +++ LC  GQ+  A  +F  + + G + N
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 1259

Query: 322  SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
              ++N L+  + K  + ++  + + +M+  G +  T+TYN LI   C+ G++  A K+  
Sbjct: 1260 VFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319

Query: 382  SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
             M   G     ST+ ++   + K G +  A  ++  +K  + +PN   ++IL+     + 
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG 1379

Query: 442  STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
              +   K   E+ +N +EP+   Y ILI   C  G  + A K + +M E+ CL P S  +
Sbjct: 1380 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL-PDSITF 1438

Query: 502  EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +++Q L +  ++ +  +L+E+M +R F+
Sbjct: 1439 NVIIQNLLKENEIHEAIQLLEEMRNRNFS 1467



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 168/351 (47%), Gaps = 7/351 (1%)

Query: 177  RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
            R  E    T + LV+         +AV  F+ M + G   D   + I+I+ LC+ R+   
Sbjct: 1010 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGL 1069

Query: 237  AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            A    + +K   + DV  Y  ++   C+ G  +EA  +F EM  AGI P+V  YS ++D 
Sbjct: 1070 AIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 1129

Query: 297  LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            LCR G++  A + F EM   G   +  T+N+L+    +A   ++V    N M   G   D
Sbjct: 1130 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 1189

Query: 357  TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
              T+  LID  CK+GK+ +A ++L  M  KG  P+  T+N +   +  +G +  A +++ 
Sbjct: 1190 AFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 1249

Query: 417  KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
             + D   + N  +YNIL+  +   +  D   +  +EM    ++P+  TY  LI   C  G
Sbjct: 1250 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG 1309

Query: 477  HWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
                A K   EM  + C   LK   S Y ++L  L + G L++  +L + +
Sbjct: 1310 RVRTAQKLFVEM--QTCGQFLK--LSTYCVLLDGLCKNGHLEEAMDLFQSI 1356



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 176/376 (46%), Gaps = 36/376 (9%)

Query: 184  DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR-RASEAQSFFD 242
            DTF+ L+    + G  +     + ++ + G  PD    +I+I   C  R        F  
Sbjct: 947  DTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGG 1006

Query: 243  SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI------------------- 283
             LK  FEPD +  T LV+G      I +A ++F EM   G+                   
Sbjct: 1007 FLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066

Query: 284  ---------------QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
                           + +V+TY ++IDALC+ G  T A D+F+EM+  G  P+ + +++L
Sbjct: 1067 TGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 329  MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
            M    +  R ++ L+ + +M+  G  AD  TYN LI    + G  ++    LN MV +G 
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 389  NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            +P+A TF ++   + K G V  A ++   M+    EP+ +TYN LM         +   K
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 449  LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            L + + +  ++ NV +Y ILI  YC     + A+++  EM   K LKP +  Y  ++  L
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM-RPKGLKPSTVTYNTLIGAL 1305

Query: 509  RRAGQLQKHEELVEKM 524
             ++G+++  ++L  +M
Sbjct: 1306 CQSGRVRTAQKLFVEM 1321



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 175/372 (47%), Gaps = 38/372 (10%)

Query: 148  PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            PD+  Y  +++   +  +   A  F   M+ R +   V T++ L+    RAGL  E    
Sbjct: 1118 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 1177

Query: 206  FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCR 264
             N M + G +PD   F+I+I  LC++ +  EAQ   + ++ K  EPD++ Y  L+ G C 
Sbjct: 1178 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237

Query: 265  AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             G + +A ++F  +   GI+ NV++Y+I+I+  C+  +I  A   F EM   G +P+++T
Sbjct: 1238 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297

Query: 325  FNNLMRVHVKASRT-----------------------------------EKVLQVYNQMK 349
            +N L+    ++ R                                    E+ + ++  +K
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357

Query: 350  RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
            +   + +   ++ L+D  C+ GKLE+A K  + + + G  P+   +N++   +   G ++
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417

Query: 410  GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             A ++  +M++  C P+++T+N+++Q           ++L +EM      P+     +L+
Sbjct: 1418 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477

Query: 470  TMYCGMGHWNNA 481
             +      W+ A
Sbjct: 1478 CLASFDPQWHAA 1489



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 163/308 (52%), Gaps = 6/308 (1%)

Query: 130  QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFS 187
            +V  F N +  R     SPD +   I + G  ++  +  A   ++LM+ +  E  + T++
Sbjct: 1173 EVTWFLNLMVDRG---FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN 1229

Query: 188  ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
             L+      G   +A   F  + + G   +  +++I+I+  C+ ++  EA  FF+ ++ K
Sbjct: 1230 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK 1289

Query: 248  -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              +P  + Y  L+   C++G +  A+++F EM+  G    + TY +++D LC+ G +  A
Sbjct: 1290 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 1349

Query: 307  HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             D+F  + +   +PN   F+ L+    +A + E+  + ++++ + G E DTI YN LI+ 
Sbjct: 1350 MDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILING 1409

Query: 367  HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             C  G L +A+K+L  M  KGC P++ TFN+I + + K  +++ A ++  +M++    P+
Sbjct: 1410 LCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469

Query: 427  TVTYNILM 434
                ++L+
Sbjct: 1470 EAVTSMLL 1477



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 124/238 (52%), Gaps = 1/238 (0%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +IN   K ++ D A+ F + M+ + ++ +  T++ L+    ++G    A   F  M+
Sbjct: 1263 YNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQ 1322

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
              G       + +++  LC+     EA   F S+K  + +P++ V++ L+ G CRAG + 
Sbjct: 1323 TCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 1382

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            EA + F E+   G++P+   Y+I+I+ LC  G ++ A  +  +M E GC P+SITFN ++
Sbjct: 1383 EAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 1442

Query: 330  RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
            +  +K +   + +Q+  +M+      D    + L+     D +   A+  L + ++KG
Sbjct: 1443 QNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 1500



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 138/297 (46%), Gaps = 3/297 (1%)

Query: 233  RASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
            + ++A   FD SL  +  P    + +L+    + G  S    ++R++   GIQP++YT +
Sbjct: 926  KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985

Query: 292  IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            I+I   C    +     VF   L+ G EP+++T   L++     +     +Q++++M + 
Sbjct: 986  ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045

Query: 352  GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
            G   D  TY  LI+  CK  K   AIK L+  ++  C  +  T+ MI   + K G    A
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIK-LHEKMKGNCKGDVFTYGMIIDALCKDGMTTEA 1104

Query: 412  HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              M+ +M      P+ V Y+ LM            L+  KEME   +  +V TY  LI  
Sbjct: 1105 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 1164

Query: 472  YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                G W     ++  M+ ++   P +  + +++  L + G++ + ++++E M  +G
Sbjct: 1165 LSRAGLWKEVTWFLNLMV-DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKG 1220



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 11/270 (4%)

Query: 264  RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG--QITRAHDVFAEMLEVGCEPN 321
            R+G+ S++E++       G + ++  +   +   CR G  ++  A  +F   L     P 
Sbjct: 893  RSGSNSKSEKI-------GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPC 945

Query: 322  SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            + TFN+L+    K      V  +Y ++  +G + D  T N LI C C    +     V  
Sbjct: 946  TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFG 1005

Query: 382  SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
              +++G  P+A T   + + +     +  A +++ +M       +  TY IL+     ++
Sbjct: 1006 GFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKAR 1065

Query: 442  STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             T + +KL ++M+ N  + +V TY ++I   C  G    A     EMI    L P   VY
Sbjct: 1066 KTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGIL-PDVVVY 1123

Query: 502  EMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
              ++  L R G+L++  E  ++M  RG +A
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISA 1153


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 200/381 (52%), Gaps = 6/381 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MI L  + R  D+ + + ++++ R ++  V TF++++    + G   +A      M+ YG
Sbjct: 195 MIALLKENRSADVEYVYKEMIR-RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE----PDVIVYTNLVRGWCRAGNIS 269
           C+P+ ++++ +I   C+     +       LK+  E    P++  +  L+ G+ +  N+ 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            + +VF+EM    ++PNV +Y+ +I+ LC  G+I+ A  +  +M+  G +PN IT+N L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K    ++ L ++  +K  G    T  YN LID +CK GK++D   +   M R+G  
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N +   + + G++  A +++ ++   K  P+ VT++ILM+ +     +     L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAML 492

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEM +  ++P   TY I++  YC  G+   A     +M +E+ L+   + Y ++LQ   
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           + G+L+    L+ +M+++G  
Sbjct: 553 QKGKLEDANMLLNEMLEKGLV 573



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 190/424 (44%), Gaps = 23/424 (5%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID-----------------LM 174
           L +++W+    +   S +L  ++++     +++     F+D                 + 
Sbjct: 85  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 144

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
              NV +      +LV  Y           AF R   YG     ++   ++  L ++ R+
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRS 204

Query: 235 SEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           ++ +  + + ++ K +P+V  +  ++   C+ G +++A  V  +MK+ G  PNV +Y+ +
Sbjct: 205 ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264

Query: 294 IDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           ID  C+    G++ +A  V  EM+E    PN  TFN L+    K       ++V+ +M  
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
              + + I+YN LI+  C  GK+ +AI + + MV  G  PN  T+N +     K   +  
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  M+G +K     P T  YN+L+  +      D    LK+EME   + P+V TY  LI 
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             C  G+   A K   ++  +    P    + ++++   R G+ +K   L+++M   G  
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502

Query: 531 ARPL 534
            R L
Sbjct: 503 PRHL 506



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 156/329 (47%), Gaps = 4/329 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P  V    L      L G  + +  A   +  M   +V   + TF+IL+  + +      
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYK-ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
           ++  F  M +    P+ I+++ +I+ LC   + SEA S  D +     +P++I Y  L+ 
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+C+   + EA  +F  +K  G  P    Y+++IDA C+ G+I     +  EM   G  P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +  T+N L+    +    E   ++++Q+   G   D +T++ L++ +C+ G+   A  +L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFAT 439
             M + G  P   T+N++ +   K G++  A  M  +M K+ +   N  +YN+L+Q ++ 
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
               +    L  EM E  + PN  TY I+
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 136/264 (51%), Gaps = 3/264 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  ++V+  V +++ L+      G  +EA+   ++M   G  P+ I ++ +I+  C+   
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381

Query: 234 ASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   F S+K +   P   +Y  L+  +C+ G I +   +  EM+  GI P+V TY+ 
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I  LCR G I  A  +F ++   G  P+ +TF+ LM  + +   + K   +  +M ++G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCNPNASTFNMIFRCISKLGDVNGA 411
            +   +TYN ++  +CK+G L+ A  +   M + +    N +++N++ +  S+ G +  A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQ 435
           + +  +M +    PN +TY I+ +
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKE 584


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 200/400 (50%), Gaps = 2/400 (0%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L+F   ++ +  F      ++ ++N   K      A   +D+M     +  V T++ ++ 
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEP 250
              + G   EAV   ++M    C+P+ + ++ +IS LC++ +  EA      L  K   P
Sbjct: 339 GLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           DV  + +L++G C   N   A  +F EM+  G +P+ +TY+++ID+LC  G++  A ++ 
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M   GC  + IT+N L+    KA++  +  +++++M+  G   +++TYN LID  CK 
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            ++EDA ++++ M+ +G  P+  T+N +     + GD+  A  +   M    CEP+ VTY
Sbjct: 519 RRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             L+     +   ++  KL + ++   +    + Y  +I           A    REM+E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 491 EKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRGF 529
           +    P +  Y +V + L    G +++  + + +++++GF
Sbjct: 639 QNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 207/444 (46%), Gaps = 9/444 (2%)

Query: 84  SLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPE 143
           S +   T PS ++ F+  ++A ++S S V+ +      +R        L  FN  + +P 
Sbjct: 24  SFSLKLTPPSSTISFASPNSA-ALSSSDVKLLD----SLRSQADDSAALRLFNLASKKPN 78

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F   P LY E++   G+   FD     ++ MK+   E+    F IL+  Y +  L  E +
Sbjct: 79  FSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEIL 138

Query: 204 HAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRG 261
              + M +++G  PD   ++ ++++L         +     +     +PDV  +  L++ 
Sbjct: 139 GVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKA 198

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            CRA  +  A  +  +M   G+ P+  T++ ++      G +  A  +  +M+E GC  +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWS 258

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMK-RLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +++ N ++    K  R E  L    +M  + G   D  T+N L++  CK G ++ AI+++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M+++G +P+  T+N +   + KLG+V  A     +M    C PNTVTYN L+      
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKE 378

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +   +L + +    + P+V T+  LI   C   +   A +   EM  + C +P    
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC-EPDEFT 437

Query: 501 YEMVLQQLRRAGQLQKHEELVEKM 524
           Y M++  L   G+L +   ++++M
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQM 461



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 2/263 (0%)

Query: 269 SEAERVFR-EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           S A R+F    K     P    Y  ++  L R G       +  +M   GCE  +  F  
Sbjct: 64  SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLI 123

Query: 328 LMRVHVKASRTEKVLQVYNQM-KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           L+  + +    +++L V + M    G + DT  YN +++       L+        M   
Sbjct: 124 LIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVW 183

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  P+ STFN++ + + +   +  A  M   M      P+  T+  +MQ +      D  
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L+++++M E     +  +  +++  +C  G   +A  +I+EM  +    P    +  ++ 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 507 QLRRAGQLQKHEELVEKMVDRGF 529
            L +AG ++   E+++ M+  G+
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGY 326


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 195/384 (50%), Gaps = 6/384 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRM 209
           Y  +I    +  + DL +  +  +  +   +   TF+ L++        ++A+     RM
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----FEPDVIVYTNLVRGWCRA 265
            E GC PD  +++ ++  LC + R+ EA      + D       PDV+ Y  ++ G+ + 
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G+  +A   + EM   GI P+V TYS +I ALC+   + +A +V   M++ G  P+ +T+
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+++  +  + + ++ +    +M+  G E + +TY+ L++  CK+G+  +A K+ +SM +
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G  P+ +T+  + +  +  G +   H +   M     +P+   +NIL+  +A  +  D 
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            + +  +M ++ + PNV  Y  +I + C  G  ++A  Y  +MI+E  L P   VY  ++
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG-LTPNIIVYTSLI 453

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L    +  K EEL+ +M+DRG 
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGI 477



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 184/374 (49%), Gaps = 8/374 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K  +   A    D M  R +E  + T+  L++ Y   G   E     + M 
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   F+I+I    ++ +  +A   F  ++     P+V+ Y  ++   C++G++ 
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   F +M   G+ PN+  Y+ +I  LC C +  +A ++  EML+ G   N+I FN+++
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H K  R  +  ++++ M R+G + D ITYN LID  C  GK+++A K+L SMV  G  
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  +     ++  ++ A  ++ +M      PN +TYNI++Q    ++ T    +L
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQ 506
              + ++  +  ++TY I++   C     NN       M +  C   L+  +  + +++ 
Sbjct: 609 YVSITKSGTQLELSTYNIILHGLC----KNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 664

Query: 507 QLRRAGQLQKHEEL 520
            L + G++ + ++L
Sbjct: 665 ALLKCGRMDEAKDL 678



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 169/347 (48%), Gaps = 2/347 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++ ++  + + G + +A   ++ M + G  PD + +S +I+ LC+ +   +A    +
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           ++ K+   PD + Y +++ G+C +G   EA    ++M+  G++PNV TYS +++ LC+ G
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G EP+  T+  L++ +       ++  + + M R G + D   +N
Sbjct: 321 RSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K  K++ A+ V + M + G NPN   +  +   + K G V+ A   + +M D 
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN + Y  L+    T    D   +L  EM +  +  N   +  +I  +C  G    +
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 500

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            K    M+    +KP    Y  ++     AG++ +  +L+  MV  G
Sbjct: 501 EKLFDLMVRIG-VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 170/381 (44%), Gaps = 9/381 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I++  K    D A  + + M    +   +  ++ L+          +A      M 
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G   + I F+ +I   C++ R  E++  FD + +   +PD+I Y  L+ G C AG + 
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++   M   G++P++ TY  +I+  CR  ++  A  +F EM+  G  PN IT+N ++
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +      RT    ++Y  + + G + +  TYN ++   CK+   ++A+++  ++      
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
               TFN++   + K G ++ A  ++         P+  TY+++ +      S + +  L
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 713

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL---- 505
              MEEN    +      ++      G    A  Y+  MI+EK     +S    +L    
Sbjct: 714 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLF-MIDEKHFSLEASTASFLLESSP 772

Query: 506 ---QQLRRAGQLQKHEELVEK 523
              +Q+ R   L  + +L+++
Sbjct: 773 IVWEQISRISHLSVNLKLIKQ 793



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 12/303 (3%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA-----GIQPNVYTY 290
           +A+  FD L  +     I   N  R        S A  V R  +MA      + P V+TY
Sbjct: 38  DARHVFDELLRRGRGASIYGLN--RALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTY 95

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
           +I+I   CR G++         +++ G   ++ITF  L++      RT   +  V  +M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK---GCNPNASTFNMIFRCISKLG 406
            LGC  D  +YN L+   C + + ++A+++L+ M      G  P+  ++N +     K G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           D + A+  Y +M D    P+ VTY+ ++     +++ D  +++   M +N V P+  TY 
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++  YC  G    A   +++M  +  ++P    Y  ++  L + G+  +  ++ + M  
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDG-VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 527 RGF 529
           RG 
Sbjct: 335 RGL 337


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 180/387 (46%), Gaps = 5/387 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +I+  GK ++   A+     M  R + +    ++ L+R  ++ G   +A  
Sbjct: 53  TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 112

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            +  M  +GC PD +  S +I  L +  R   A   F S++ +   P+ +VY+ L+ G C
Sbjct: 113 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 172

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A  +  A  +  +MK A   P+  TY+++ID LC+ G +  A   F EMLE GC+P+  
Sbjct: 173 KARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 232

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRL-GCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           T+N L+    KA  T+       Q   + GC  D  TY  ++D   K+ K+E+A+ ++  
Sbjct: 233 TYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEK 292

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +   GC P  +T+N +   + K+G +  A  +  K+ D  C P+ VTY  L+      K 
Sbjct: 293 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 352

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           +    KL KEM    +  +   Y  LI      G    A    + M    C+ P      
Sbjct: 353 SFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV-PDVVTLS 411

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  L +AG++     + + M  RG 
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGL 438



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 172/350 (49%), Gaps = 3/350 (0%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           T+ T++ L+    + G   EA+    ++ + GC PD + ++ +I  L +++R+ EA   F
Sbjct: 20  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 79

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             +  +    D + YT L+R   + G I +A  V++ M   G  P+V T S +ID L + 
Sbjct: 80  KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 139

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+I  A  +F  M   G  PN + ++ L+    KA + +  L++  QMK+  C  DTITY
Sbjct: 140 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 199

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA-HRMYGKMK 419
           N LID  CK G +E A    + M+  GC P+  T+N++     K G+ + A H +  +  
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETT 259

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
              C  +  TY  ++   A +K  +  + L +++  N   P + TY  L+   C MG   
Sbjct: 260 INGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 319

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            A   +R++++  C  P    Y  ++  L +  +  +  +L ++M  RG 
Sbjct: 320 EAIDLLRKIVDNGC-TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 368



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 197/429 (45%), Gaps = 9/429 (2%)

Query: 104 AHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           A  ++P+ V +  +I   C  R     L++L+        P+ +     Y+ +I+   K 
Sbjct: 154 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT----YNVLIDGLCKS 209

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIA 220
              + A  F D M     +  V T++IL+  + +AG    A H+  +     GC  D   
Sbjct: 210 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHT 269

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++ ++  L + ++  EA +  + +  +   P +  Y  L+ G C+ G + EA  + R++ 
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 329

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G  P+V TY+ +ID L +  +   A+ +F EM   G   +++ +  L+R  ++  +  
Sbjct: 330 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 389

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           +   VY  M   GC  D +T + +ID   K G++  A+++  SM  +G  PN   ++ + 
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 449

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + K   ++ A  M  +MK   C P+T+TYNIL+     S   +       EM E   +
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 509

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+V TY ILI+ +C  G+ + A     +M   +C       Y  ++  L +  QL K   
Sbjct: 510 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC-SANVVTYGALISGLCKRRQLTKASL 568

Query: 520 LVEKMVDRG 528
             + M +RG
Sbjct: 569 YFQHMKERG 577



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 165/332 (49%), Gaps = 3/332 (0%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           EAV    ++   GC P    ++ +++ LC+  R  EA      + D    PDV+ YT+L+
Sbjct: 4   EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G  +     EA ++F+EM + G+  +   Y+ +I  L + G+I +A  V+  M   GC 
Sbjct: 64  DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +T + ++    KA R    ++++  M+  G   + + Y+ LI   CK  K++ A+++
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L  M +  C P+  T+N++   + K GDV  A   + +M +  C+P+  TYNIL+  F  
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243

Query: 440 SKSTDMVL-KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
           + +TD     L +E   N    +++TY  ++           A   + ++    C  P  
Sbjct: 244 AGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC-TPTI 302

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           + Y  +L  L + G+L++  +L+ K+VD G T
Sbjct: 303 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 334



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 122/245 (49%), Gaps = 1/245 (0%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           I EA  +  ++   G  P + TY+ +++ LC+ G++  A D+  ++++ GC P+ +T+ +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K  R+ +  +++ +M   G   DT+ Y  LI    + GK+  A  V  +M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
           C P+  T + +   +SK G +  A R++  M+     PN V Y+ L+     ++  D  L
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           ++  +M++    P+  TY +LI   C  G    A  +  EM+E  C KP    Y +++  
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGC-KPDVYTYNILISG 240

Query: 508 LRRAG 512
             +AG
Sbjct: 241 FCKAG 245



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 36/227 (15%)

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           + E+ + +  ++   GC     TYN L++  CK G+LE+AI +L  +V  GC P+  T+ 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 397 ---------------------MIFR-------CISKL-------GDVNGAHRMYGKMKDL 421
                                M  R       C + L       G +  A  +Y  M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C P+ VT + ++   + +      +++ K ME   + PN   Y  LI   C     + A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + + +M +  C  P +  Y +++  L ++G ++      ++M++ G
Sbjct: 181 LEMLAQMKKAFC-TPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG 226


>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 517

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 190/366 (51%), Gaps = 7/366 (1%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           ++ S  +Y+E++++ GK+R+F+     +D M  R+  +   T+ +L+ RY  A    EAV
Sbjct: 133 YISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAV 192

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
             F R  E+G   D +AF  ++  LCR +    A++ F S + +F  D+     ++ GWC
Sbjct: 193 GVFERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGWC 252

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             GN+ EA+R+++++  +  +P+V +Y  +I+AL + G++ +A +++  + E G  P+  
Sbjct: 253 VLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVK 312

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
             NN++       R  + L+V+ +M   G   + +TYN L+   CK  + E   +++  M
Sbjct: 313 ICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEM 372

Query: 384 VRKG--CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
             KG  C+PN  TF  + +   +  DV+    +  +M   KCE  +  YN++ +++    
Sbjct: 373 EHKGGSCSPNDVTFGYLLKYSQRSKDVDA---VLERMAKNKCEMTSDLYNLMFRLYVQWD 429

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
           + + V ++  EME + + P+  TY I I      G    A  Y +EM+  K + P     
Sbjct: 430 NEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMM-SKGMVPEPRT- 487

Query: 502 EMVLQQ 507
           EM+L Q
Sbjct: 488 EMLLNQ 493



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 4/246 (1%)

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ ++D L +  +    H V  EM +     +  T+  L+  +  A + ++ + V+ + 
Sbjct: 139 VYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVGVFERR 198

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-GCNPNASTFNMIFRCISKLGD 407
           +  G E D + ++ L+   C+   +E A  +  S  R+ GC+    T N+I      LG+
Sbjct: 199 REFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD--IRTMNIILNGWCVLGN 256

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V+ A R++  +   KC+P+ V+Y  ++            ++L + + E    P+V     
Sbjct: 257 VHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNN 316

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I   C       A +  +EM  EK   P    Y  +L+ L +  + +K  ELVE+M  +
Sbjct: 317 VIDALCFKKRIPEALEVFKEM-SEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHK 375

Query: 528 GFTARP 533
           G +  P
Sbjct: 376 GGSCSP 381


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 4/322 (1%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           T  T++ L+    +A  A+EA      M   GC PD   ++ +I+  C+ +++ +A   F
Sbjct: 53  TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 112

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF-REMKMAGIQPNVYTYSIVIDALCR 299
           + L  + F PDV+ Y+ L+ G C+ G + EA  +F R +K     PN  TY+ +I   CR
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G++  A ++   M E G  P+ +T+  LM    K +R +    + NQM R G   + +T
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +  L+D  C++ +L DA+ +L  M RK C+P   T+N I     ++  +  A +    ++
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LE 290

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           ++ C PN V++NI+++       +   ++L +E       P+V  Y  +I + C     +
Sbjct: 291 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVD 350

Query: 480 NAYKYIREMIEEKCLKPGSSVY 501
            A +  R+M+EE    P S  Y
Sbjct: 351 EACRVYRKMLEEPGCLPNSITY 372



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 163/313 (52%), Gaps = 5/313 (1%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P  + ++ +IS LC+  RASEA    + +      PD+  YT L+ G+C++    +A RV
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHV 333
           F ++   G +P+V TYS +ID LC+ G++  A D+F  M++ G C PN++T+N+L+    
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           +  + ++ + +  +M   G   D +TY  L++  CK  +L+DA  +LN M RKG  PN  
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           TF  +   + +   ++ A  + G+M+   C P   TYN ++  +      +   K    +
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           EE +  PNV ++ I+I   C +   + A + + E    +C  P   +Y  V+  L R  +
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRC-NPDVVMYTTVIDVLCREKK 348

Query: 514 LQKHEELVEKMVD 526
           + +   +  KM++
Sbjct: 349 VDEACRVYRKMLE 361



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 160/326 (49%), Gaps = 5/326 (1%)

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           E V +   Y+ +I+   K  +   A+  ++ M        + T++ L+  + ++  + +A
Sbjct: 49  EEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDA 108

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVR 260
           +  F ++   G  PD + +S +I  LC++ R  EA   F  +       P+ + Y +L+ 
Sbjct: 109 LRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 168

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+CR G + EA  +   M   G  P+V TY+ +++  C+  ++  A+D+  +M   G  P
Sbjct: 169 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N +TF +LM    + +R    + +  +M+R  C     TYN ++D +C+  +LE+A K +
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM 288

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             +    C PN  +FN++ R + K+   + A  +  + +  +C P+ V Y  ++ +    
Sbjct: 289 --LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCRE 346

Query: 441 KSTDMVLKL-KKEMEENEVEPNVNTY 465
           K  D   ++ +K +EE    PN  TY
Sbjct: 347 KKVDEACRVYRKMLEEPGCLPNSITY 372



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 8/234 (3%)

Query: 98  FSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMI 155
           F ++  + S  P+TV +    S   R G    ++    N +    E   SPD+  Y  ++
Sbjct: 147 FGRMIKSGSCMPNTVTYNSLISGFCRMG----KMDEAMNLLERMAETGSSPDVVTYTTLM 202

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           N   K+ + D A+  ++ M  + +   V TF+ L+    R    ++AVH    M    C+
Sbjct: 203 NGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS 262

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           P    ++ ++   CR  +  EA+ F     D   P+V+ +  ++RG C+    SEA  + 
Sbjct: 263 PTVYTYNTILDGYCRVNQLEEARKFMLEEMD-CPPNVVSFNIMIRGLCKVNRSSEAMELV 321

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITFNNL 328
            E +     P+V  Y+ VID LCR  ++  A  V+ +MLE  GC PNSIT++  
Sbjct: 322 EEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 385 RKGCN---------PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           R+GC          P A T+N +   + K    + A+ +  +M    C P+  TY  L+ 
Sbjct: 38  RRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLIT 97

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            F  SK +D  L++ +++      P+V TY  LI   C  G    A      MI+     
Sbjct: 98  GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 157

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           P +  Y  ++    R G++ +   L+E+M + G
Sbjct: 158 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 190


>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 167/354 (47%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FFNW   +P      D Y+ +I   G+ +  +     +  M  + +    +T SI++  +
Sbjct: 111 FFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFVVKVLKDMHIQGISPNYETLSIVMDSF 170

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
           ++A   ++A+  F  +EE+G   D  + ++++  LC++     A  FF+++K     + +
Sbjct: 171 IKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPFNCM 230

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y  ++ GW + G I E ER  + M   G  PN  T+S +I+ L R G+I  A +VF  M
Sbjct: 231 TYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHM 290

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            E GC PN+  +N L+   +     ++ L+ YN M    C+ +  TY  LI    K  K+
Sbjct: 291 EETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKV 350

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            DA+++L+ MV +G  P           + + G  + A  +Y K + + C  +   Y +L
Sbjct: 351 ADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLL 410

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           +   +      M+L L  EM+E+    +   Y  +I   C +G  + A   + E
Sbjct: 411 LMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEE 464



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 266 GNIS-EAERVF--REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           GN+  EA  +F    +K   I  +V TY+++I AL R   I     V  +M   G  PN 
Sbjct: 101 GNLGGEAMVIFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFVVKVLKDMHIQGISPNY 160

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T + +M   +KA +  K ++++  ++  G + DT + N L+ C C+   +  A    N+
Sbjct: 161 ETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNA 220

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M + G   N  T+N+I    SK G +    R    M      PN +T++ L++    +  
Sbjct: 221 M-KGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGR 279

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  +++   MEE    PN   Y  LI+ +     ++   KY   M+   C  P    Y 
Sbjct: 280 IDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNC-DPNMDTYT 338

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
            ++    +A ++    E++++MV RG
Sbjct: 339 KLIVAFLKARKVADALEMLDEMVGRG 364



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TFS L+    RAG   +AV  F+ MEE GC P+   ++ +IS     R   E   +++ +
Sbjct: 266 TFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFM 325

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                +P++  YT L+  + +A  +++A  +  EM   G+ P     +  I+ LC+ G  
Sbjct: 326 VSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPP 385

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  ++ +  +VGC  +   +  L+    +  +   +L ++++M+  G  +DT  Y ++
Sbjct: 386 HAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYV 445

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           I+  C  G+L+ A+ V+   + KG  P+
Sbjct: 446 INGLCNIGQLDTAVLVMEESLHKGFCPS 473


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 211/449 (46%), Gaps = 41/449 (9%)

Query: 118 KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
           K   + +GIP    +  F+ +T +  F  +   Y  +IN   K R+  LA    + MK  
Sbjct: 85  KGVWMENGIP--DAVQLFDEMTEKGLFGDAKT-YGILINGLCKARKTGLAIKLHEKMKG- 140

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           N +  V T+ +++    + G+  EA+  F+ M   G  PD + +S ++  LCR  R  EA
Sbjct: 141 NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 200

Query: 238 QSFFDSLKDK------------------------------------FEPDVIVYTNLVRG 261
             FF  ++ +                                    F PD   +T L+ G
Sbjct: 201 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 260

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+ G + EA+++   M   G +P++ TY+ +++ LC  GQ+  A  +F  + + G + N
Sbjct: 261 LCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 320

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             ++N L+  + K  + ++  +++ +M+  G +  T+TYN LI   C+ G++  A K+  
Sbjct: 321 VFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 380

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M   G     ST+ ++   + K G +  A  ++  +K  + +PN   ++IL+     + 
Sbjct: 381 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAG 440

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             +   K   E+ +N +EP+   Y ILI   C  G  + A K + +M E+ CL P S  +
Sbjct: 441 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL-PDSITF 499

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +++Q L +  ++ +  +L+E+M +R F+
Sbjct: 500 NVIIQNLLKENEIHEAIQLLEEMRNRNFS 528



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 180/361 (49%), Gaps = 4/361 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +++   +  +   A  F   M+ R +   V T++ L+    RAGL  E    
Sbjct: 179 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 238

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCR 264
            N M + G +PD   F+I+I  LC++ +  EAQ   + +  K  EPD++ Y  L+ G C 
Sbjct: 239 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCL 298

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +A ++F  +   GI+ NV++Y+I+I+  C+  +I  A  +F EM   G +P+++T
Sbjct: 299 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVT 358

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    ++ R     +++ +M+  G      TY  L+D  CK+G LE+AI +  S+ 
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           +    PN   F+++   + + G +  A + + ++     EP+T+ YNIL+          
Sbjct: 419 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 478

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             +KL  +MEE    P+  T+ ++I         + A + + EM   +   P  +V  M+
Sbjct: 479 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM-RNRNFSPDEAVTSML 537

Query: 505 L 505
           L
Sbjct: 538 L 538



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 169/351 (48%), Gaps = 7/351 (1%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R  E    T + LV+         +AV  F+ M E G   D   + I+I+ LC+ R+   
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           A    + +K   + DV  Y  ++   C+ G  +EA  +F EM  AGI P+V  YS ++D 
Sbjct: 131 AIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LCR G++  A + F EM   G   +  T+N+L+    +A   ++V    N M   G   D
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             T+  LID  CK+GK+ +A ++L  M  KG  P+  T+N +   +  +G +  A +++ 
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            + D   + N  +YNIL+  +   +  D   +L +EM    ++P+  TY  LI   C  G
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370

Query: 477 HWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               A K   EM  + C   LK   S Y ++L  L + G L++  +L + +
Sbjct: 371 RVRTAQKLFVEM--QTCGQFLKL--STYCVLLDGLCKNGHLEEAIDLFQSI 417



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 173/357 (48%), Gaps = 6/357 (1%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT 185
           L + L FF  +  R     S D+Y  + +I+   +   +     F++LM  R       T
Sbjct: 197 LKEALEFFKEMEGRG---ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           F+IL+    + G   EA      M   G  PD + ++ +++ LC   +  +A   F+SL 
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           D+  + +V  Y  L+ G+C+   I EA R+F EM+  G++P+  TY+ +I ALC+ G++ 
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +F EM   G      T+  L+    K    E+ + ++  +K+   + +   ++ L+
Sbjct: 374 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILL 433

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  C+ GKLE+A K  + + + G  P+   +N++   +   G ++ A ++  +M++  C 
Sbjct: 434 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 493

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           P+++T+N+++Q           ++L +EM      P+     +L+ +      W+ A
Sbjct: 494 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAA 550



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 148/315 (46%), Gaps = 35/315 (11%)

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI--------- 294
           LK  FEPD +  T LV+G      I +A ++F EM   G+  +  TY I+I         
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 295 -------------------------DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
                                    D+LC+ G  T A D+F+EM+  G  P+ + +++LM
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  R ++ L+ + +M+  G  AD  TYN LI    + G  ++    LN MV +G +
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A TF ++   + K G V  A ++   M     EP+ +TYN LM         +   KL
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + + +  ++ NV +Y ILI  YC     + A++   EM   K LKP +  Y  ++  L 
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM-RPKGLKPSTVTYNTLIGALC 367

Query: 510 RAGQLQKHEELVEKM 524
           ++G+++  ++L  +M
Sbjct: 368 QSGRVRTAQKLFVEM 382



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 38/278 (13%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ ++N    V Q + A    + +  R +++ V +++IL+  Y +     EA   
Sbjct: 284 PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRL 343

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-------------------DSL-- 244
           F  M   G  P  + ++ +I  LC+  R   AQ  F                   D L  
Sbjct: 344 FEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCK 403

Query: 245 ---------------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                          K + +P++ V++ L+ G CRAG + EA + F E+   G++P+   
Sbjct: 404 NGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIA 463

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+I+I+ LC  G ++ A  +  +M E GC P+SITFN +++  +K +   + +Q+  +M+
Sbjct: 464 YNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMR 523

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
                 D    + L+     D +   A+  L + ++KG
Sbjct: 524 NRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 561



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           L+ G EP+++T   L++     +     +Q++++M   G   D  TY  LI+  CK  K 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             AIK L+  ++  C  +  T+ MI   + K G    A  M+ +M      P+ V Y+ L
Sbjct: 129 GLAIK-LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M            L+  KEME   +  +V TY  LI      G W     ++  M+ ++ 
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV-DRG 246

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             P +  + +++  L + G++ + ++++E M  +G
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +++G  P+A T   + + +     +  A +++ +M +     +  TY IL+     ++ T
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
            + +KL ++M+ N  + +V TY ++I   C  G    A     EMI    L P   VY  
Sbjct: 129 GLAIKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGIL-PDVVVYSS 186

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++  L R G+L++  E  ++M  RG +A
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISA 214


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 2/346 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           ++ LV+   +AG   E +    RM+E G  P   A++ V+   C +R+A EA+     + 
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           +K   P V+  T ++  +C+ G +S+A RV   MK+ G +PNV+TY+ ++   C  G++ 
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A  +  +M   G  P+++T+N L+R        E   ++   M+  G  AD  TYN LI
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           +  CKDG+ + A  + +S+  +G  PNA TFN +   + K G V+ A +   KM    C 
Sbjct: 295 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+T TY+  ++     K +   L    EM + +V+P+   Y I+I       ++    + 
Sbjct: 355 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 414

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             EM+   C  P    Y   ++     G+L + E ++ +M   G T
Sbjct: 415 WGEMVSSGC-NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 459



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 6/368 (1%)

Query: 162 RQFDLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           R+ DLA    ++ LM          TF+ L+  Y R      A   F++M   G A D +
Sbjct: 23  RRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVV 82

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           +++ +I   C   R  EA   F  +    +PD+ +Y  LV+G C+AG   E   + R MK
Sbjct: 83  SYAALIEGFCETGRIDEAVELFGEMD---QPDMHMYAALVKGLCKAGRGEEGLLMLRRMK 139

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G +P+   Y+ V+D  C   +   A ++  EM E G  P  +T   ++  + K  R  
Sbjct: 140 ELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMS 199

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
             L+V   MK  GC+ +  TYN L+   C +GK+  A+ +LN M   G NP+A T+N++ 
Sbjct: 200 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLI 259

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
           R     G +  A R+   M+      +  TYN L+        TD    L   +E   ++
Sbjct: 260 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 319

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           PN  T+  LI   C  G  + A+K++ +M+   C  P +  Y   ++ L +    Q+   
Sbjct: 320 PNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGC-TPDTYTYSSFIEHLCKMKGSQEGLS 378

Query: 520 LVEKMVDR 527
            + +M+ +
Sbjct: 379 FIGEMLQK 386



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 168/347 (48%), Gaps = 6/347 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ ++R   R    A A+   + M   G  PD   F+ +I   CR  +   A+  FD +
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             + F  DV+ Y  L+ G+C  G I EA  +F EM     QP+++ Y+ ++  LC+ G+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +   M E+G  P++  +  ++       + ++  ++  +M   G     +T   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+ +CK+G++ DA++VL  M  +GC PN  T+N + +     G V+ A  +  KM+    
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ VTYN+L++        +   +L + ME + +  +  TY  LI   C  G  + A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              + +E + +KP +  +  ++  L ++G++    + +EKMV  G T
Sbjct: 309 LF-DSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 181/387 (46%), Gaps = 9/387 (2%)

Query: 125 GIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           G+ +L+ +    W   RP    S   Y  +++     R+   A   +  M  + +   V 
Sbjct: 131 GLLMLRRMKELGW---RP----STRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVV 183

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T + ++  Y + G  ++A+     M+  GC P+   ++ ++   C + +  +A +  + +
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +     PD + Y  L+RG C  G+I  A R+ R M+  G+  + YTY+ +I+ALC+ G+ 
Sbjct: 244 RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 303

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  +F  +   G +PN++TFN+L+    K+ + +   +   +M   GC  DT TY+  
Sbjct: 304 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSF 363

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK    ++ +  +  M++K   P+   + ++   + K  +     R +G+M    C
Sbjct: 364 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 423

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ VTY   M+ +      +    +  EM +N V  +   Y  L+  +  +G  ++A  
Sbjct: 424 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 483

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRR 510
            +++M     + P    Y ++L+ L R
Sbjct: 484 ILKQMTSVASV-PNQFTYFILLRHLVR 509



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 192/469 (40%), Gaps = 70/469 (14%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   VI   C        L+VL        +P       L     N  GKV +   A   
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN-EGKVHK---AMAL 239

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           ++ M+   V     T+++L+R     G    A      ME  G   D+  ++ +I+ LC+
Sbjct: 240 LNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 299

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             R  +A S FDSL+ +  +P+ + + +L+ G C++G +  A +   +M  AG  P+ YT
Sbjct: 300 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYT 359

Query: 290 YSIVIDALCRC--------------------------------------GQITRAHDVFA 311
           YS  I+ LC+                                       G + R    + 
Sbjct: 360 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR---TWG 416

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM+  GC P+ +T+   MR +    R  +   V  +M + G   DT+ YN L+D H   G
Sbjct: 417 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 476

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK--------------------LGDVNGA 411
           + + A+ +L  M      PN  T+ ++ R + +                    L DV G 
Sbjct: 477 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG- 535

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++  MK  +  PN+ TY+ +++ F+    T+    L   M+E+ +  N + Y  L+T 
Sbjct: 536 --LFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTC 593

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +C    + +A+  +  MI+   + P    Y+ +L  L   GQ  K +E+
Sbjct: 594 FCKSKRYLDAWVLVCSMIQHGFI-PHLMSYQHLLSGLICEGQTDKAKEI 641



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/371 (19%), Positives = 143/371 (38%), Gaps = 53/371 (14%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K  + D+AW F++ M S        T+S  +    +   + E +     M 
Sbjct: 325 FNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 384

Query: 211 EYGCAPDKIAFSIVISILCRKRRAS-EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +    P  + ++IVI  L ++R     A+++ + +     PDV+ YT  +R +C  G ++
Sbjct: 385 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 444

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE V  EM   G+  +   Y+ ++D     GQ   A  +  +M  V   PN  T+  L+
Sbjct: 445 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 504

Query: 330 RVHVKA----------------------------------------------------SR 337
           R  V+                                                      R
Sbjct: 505 RHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGR 564

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
           TE+   + + MK      +   Y  L+ C CK  +  DA  ++ SM++ G  P+  ++  
Sbjct: 565 TEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQH 624

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +   G  + A  ++   +     P+ + + +++        +D+  ++   +E   
Sbjct: 625 LLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMN 684

Query: 458 VEPNVNTYRIL 468
             P+  TY +L
Sbjct: 685 CRPSHQTYAML 695



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 82/178 (46%), Gaps = 2/178 (1%)

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
           GV   I L  V   F+ V  + EF+ +   Y  ++    +  + + A   + LMK  ++ 
Sbjct: 523 GVWKAIELTDVFGLFD-VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 581

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS-ILCRKRRASEAQS 239
           +  D ++ LV  + ++    +A      M ++G  P  +++  ++S ++C  +     + 
Sbjct: 582 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI 641

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           F +S    + PD IV+  ++ G  + G+   +  +   ++    +P+  TY+++ + L
Sbjct: 642 FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 699


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 191/399 (47%), Gaps = 4/399 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           +V+  F+ V    +    P L  Y+ +IN   K  +FD A      M  + +     T+S
Sbjct: 346 KVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYS 405

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           IL+  + R G    A+H   +M   G       ++ +I+  C+    S A SFFD + DK
Sbjct: 406 ILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDK 465

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             +P V+ YT+L+ G+C  G + EA R++ EM   GI PN YT++ +I AL R  ++T A
Sbjct: 466 GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EMLE    PN +T+N ++  H K   T K  ++ NQM + G   DT TY  LI  
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C  G++ +A K ++ + R+    N   ++ +     K G +  A  +  +M     + +
Sbjct: 586 LCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            V Y +L+      + T  V  L K M +  + P+   Y  +I  Y   G    A+    
Sbjct: 646 LVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWD 705

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            MI+E C  P    Y  ++ +L +AG + K E L ++M+
Sbjct: 706 IMIDEGC-TPNIVTYTTLINELCKAGLMDKAELLWKEML 743



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 179/364 (49%), Gaps = 5/364 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A+   D M  +N+     T+++++  + + G   +A    N+M + G  PD   +  +IS
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLIS 584

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   R  EA+ F D L ++ F+ + + Y+ L+ G+C+ G + +A  V REM   G+  
Sbjct: 585 SLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDM 644

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++  Y+++ID   +    +    +   M +    P+ + + +++  + KA   +K   ++
Sbjct: 645 DLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIW 704

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + M   GC  + +TY  LI+  CK G ++ A  +   M+     PN  T+      +++ 
Sbjct: 705 DIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLARE 764

Query: 406 GDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           G +  A +++  M K L    NTV+YNIL++ F      +   KL  EM +N + P+  T
Sbjct: 765 GSMEKAVQLHNDMLKGLL--ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCIT 822

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  +I   C  G+ + A ++   M+  K LKP +  Y  ++     AG+L K  EL + M
Sbjct: 823 YSTIIYQCCRRGNLDGAIEFWDTMLN-KGLKPDTLAYNFLIYGCCIAGELGKAFELRDDM 881

Query: 525 VDRG 528
           + RG
Sbjct: 882 IRRG 885



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 155/323 (47%), Gaps = 2/323 (0%)

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
           + M E G  P + A S ++  L RK +  +A    + +K     P + VY  L+   C+ 
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G   EAE +F+EM   G+  N  TYSI+ID+ CR G++  A     +M+  G +     +
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+L+  H K       +  +++M   G +   ++Y  LI  +C  GKL +A ++ + M  
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  PN  TF  +   + +   +  A R++ +M +    PN VTYN++++      +T  
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             +L  +M +  + P+  TYR LI+  C  G    A K+I ++  E   K     Y  +L
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH-FKLNEMCYSALL 618

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
               + G+L+    +  +MV RG
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRG 641



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 172/365 (47%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A+  ++ +K      ++  ++ L+    + G   EA   F  M E G   + + +SI+I 
Sbjct: 350 AFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILID 409

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR+ +   A  F   +     +  V  Y +L+ G C+ GN+S A   F EM   G++P
Sbjct: 410 SFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKP 469

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            V +Y+ +I   C  G++  A  ++ EM   G  PN+ TF  L+    +A+R     +++
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M       + +TYN +I+ HCK+G    A ++LN MV+KG  P+  T+  +   +   
Sbjct: 530 DEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCST 589

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V  A +    +     + N + Y+ L+  +         L + +EM +  V+ ++  Y
Sbjct: 590 GRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCY 649

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            +LI         +  +  ++ M +++ L+P   +Y  ++    +AG ++K   + + M+
Sbjct: 650 AVLIDGTIKEQDTSAVFGLLKNMHDQR-LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMI 708

Query: 526 DRGFT 530
           D G T
Sbjct: 709 DEGCT 713



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 158/303 (52%), Gaps = 2/303 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  FID +   + ++    +S L+  Y + G   +A+     M + G   D + ++++I 
Sbjct: 595 AKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID 654

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              +++  S       ++ D +  PD ++YT+++ G+ +AG++ +A  ++  M   G  P
Sbjct: 655 GTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTP 714

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N+ TY+ +I+ LC+ G + +A  ++ EML     PN +T+   +    +    EK +Q++
Sbjct: 715 NIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLH 774

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M + G  A+T++YN L+   CK G++E+A K+L+ M+     P+  T++ I     + 
Sbjct: 775 NDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRR 833

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G+++GA   +  M +   +P+T+ YN L+     +       +L+ +M    V+PN  T+
Sbjct: 834 GNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATH 893

Query: 466 RIL 468
           + L
Sbjct: 894 KSL 896



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 172/388 (44%), Gaps = 9/388 (2%)

Query: 153 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           E++N   K+R+ D+       + S  +   +  +  ++R +      A+A     RME  
Sbjct: 198 EVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESS 257

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
               + + ++++I  LC+ +R  EA    + L  K      + Y  LV G C+       
Sbjct: 258 DL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVG 315

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             V  EM   G  P     S +++ L R G++  A D+   + +VG  P+   +N L+  
Sbjct: 316 AGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINS 375

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K  + ++   ++ +M   G  A+ +TY+ LID  C+ GKL+ AI  L  M+  G    
Sbjct: 376 LCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKIT 435

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
              +N +     KLG+++ A   + +M D   +P  V+Y  L+  +          +L  
Sbjct: 436 VYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYH 495

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM    + PN  T+  LI+         +A++   EM+E+  + P    Y ++++   + 
Sbjct: 496 EMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN-MMPNEVTYNVMIEGHCKE 554

Query: 512 GQLQKHEELVEKMVDRG-----FTARPL 534
           G   K  EL+ +MV +G     +T RPL
Sbjct: 555 GNTVKAFELLNQMVQKGLVPDTYTYRPL 582



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/335 (21%), Positives = 135/335 (40%), Gaps = 38/335 (11%)

Query: 232 RRASEAQSFFDSLKDKFEP-DVIV---YTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           R   + +  F++L D FE  D I    +  L++ + +   + ++  +FR M+   + P V
Sbjct: 134 RGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQV 193

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP--------------------------- 320
            T   V++ L +  ++     +F E+L +G  P                           
Sbjct: 194 RTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQR 253

Query: 321 ------NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
                 N + +N L+    K  R  + +++ N + + G  A  +TY  L+   CK  + E
Sbjct: 254 MESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFE 313

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
               V++ M+  G  P  +  + +   + + G V  A  +  ++K +   P+   YN L+
Sbjct: 314 VGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALI 373

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                    D    L KEM E  +  N  TY ILI  +C  G  + A  ++ +MI    +
Sbjct: 374 NSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG-I 432

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           K     Y  ++    + G L       ++M+D+G 
Sbjct: 433 KITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGL 467


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA++ ++ M+   +E  V  ++ ++    +     +A++ 
Sbjct: 14  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  ME  G  P+ + +S +IS LC   R S+A     D ++ K  PDV  ++ L+  + +
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE+++ EM    I P++ TYS +I+  C   ++  A  +F  M+   C P+ +T
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++   K  R E+ ++V+ +M + G   +T+TYN LI    + G  + A ++   MV
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  PN  T+N +   + K G +  A  ++  ++  K EP   TYNI+++    +   +
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+P+V  Y  +I+ +C  G    A    +EM E+  L P S  Y  +
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTL 372

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G  +   EL+++M   GF  
Sbjct: 373 IRARLRDGDREASAELIKEMRSCGFAG 399



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 169/315 (53%), Gaps = 2/315 (0%)

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRA 265
           +RM   GC PD + + +V++ LC++     A +  + + + K EP V++Y  ++ G C+ 
Sbjct: 5   DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 64

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
            ++ +A  +F+EM+  GI+PNV TYS +I  LC  G+ + A  + ++M+E    P+  TF
Sbjct: 65  KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 124

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           + L+   VK  +  +  ++Y++M +   +   +TY+ LI+  C   +L++A ++   MV 
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           K C P+  T+N + +   K   V     ++ +M       NTVTYNIL+Q    +   DM
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 244

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             ++ KEM  + V PN+ TY  L+   C  G    A   + E ++   ++P    Y +++
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMI 303

Query: 506 QQLRRAGQLQKHEEL 520
           + + +AG+++   +L
Sbjct: 304 EGMCKAGKVEDGWDL 318



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 183/360 (50%), Gaps = 2/360 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            ID M ++  +  + T+ ++V    + G    A +  N+ME+    P  + ++ +I  LC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + +   +A + F  ++ K   P+V+ Y++L+   C  G  S+A R+  +M    I P+V+
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T+S +IDA  + G++  A  ++ EM++   +P+ +T+++L+       R ++  Q++  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
               C  D +TYN LI   CK  ++E+ ++V   M ++G   N  T+N++ + + + GD 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  ++ +M      PN +TYN L+     +   +  + + + ++ +++EP + TY I+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I   C  G   + +     +   K +KP    Y  ++    R G  ++ + L ++M + G
Sbjct: 303 IEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 164/358 (45%), Gaps = 5/358 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  +H    L +         RP  V     Y  +I+      ++  A   +  M
Sbjct: 57  IIDGLCKYKHMDDALNLFKEMETKGIRPNVVT----YSSLISCLCNYGRWSDASRLLSDM 112

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             R +   V TFS L+  +V+ G   EA   ++ M +    P  + +S +I+  C   R 
Sbjct: 113 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 172

Query: 235 SEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA+  F+ +  K   PDV+ Y  L++G+C+   + E   VFREM   G+  N  TY+I+
Sbjct: 173 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 232

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  L + G    A ++F EM+  G  PN +T+N L+    K  + EK + V+  ++R   
Sbjct: 233 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           E    TYN +I+  CK GK+ED   +  ++  KG  P+   +N +     + G    A  
Sbjct: 293 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 352

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           ++ +MK+    PN+  YN L++        +   +L KEM       + +T  ++  M
Sbjct: 353 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 410



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 36/225 (16%)

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCK---------------DGKLE------------ 374
           + + ++M   GC+ D +TY  +++  CK                GKLE            
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 375 --------DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
                   DA+ +   M  KG  PN  T++ +  C+   G  + A R+   M + K  P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             T++ L+  F          KL  EM +  ++P++ TY  LI  +C     + A +   
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            M+ + C  P    Y  +++   +  ++++  E+  +M  RG   
Sbjct: 181 FMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 224



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 1/148 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K  + + A    + ++   +E T+ T++I++    +AG   +    F  + 
Sbjct: 264 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 323

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD +A++ +IS  CRK    EA + F  +K D   P+   Y  L+R   R G+  
Sbjct: 324 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 383

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL 297
            +  + +EM+  G   +  T  +V + L
Sbjct: 384 ASAELIKEMRSCGFAGDASTIGLVTNML 411


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 167/356 (46%), Gaps = 5/356 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK    E  V T+++L++   +      A      M   GC PD ++++ VIS +C    
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             E +     L ++FEP V VY  L+ G C+  +   A  + REM   GI PNV +YS +
Sbjct: 232 VKEGRE----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR-LG 352
           I+ LC  GQI  A     +ML+ GC PN  T ++L++       T   L ++NQM R  G
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + + + YN L+   C  G +  A+ V + M   GC+PN  T+  +    +K G ++GA 
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++ KM    C PN V Y  +++             L + M +    P+V T+   I   
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  G  + A K  R+M ++    P    Y  +L  L +A ++++   L  ++  RG
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 169/350 (48%), Gaps = 8/350 (2%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           E  V  ++ L+    +      A      M E G +P+ I++S +I++LC   +   A S
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302

Query: 240 FFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDAL 297
           F    LK    P++   ++LV+G    G   +A  ++ +M +  G+QPNV  Y+ ++   
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C  G I +A  VF+ M E+GC PN  T+ +L+    K    +  + ++N+M   GC  + 
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + Y  +++  C+  K ++A  ++  M ++ C P+  TFN   + +   G ++ A +++ +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482

Query: 418 MKDL-KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           M+   +C PN VTYN L+   A +   +    L +E+    VE + +TY  L+   C  G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
               A + + +M+ +     G S  E+ +  +  A   Q   E   +M+D
Sbjct: 543 LPGIALQLVGKMMVD-----GKSPDEITMNMIILAYCKQGKAERAAQMLD 587



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 6/314 (1%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           FD    +  +++   ++  V  ++ LV+ +   G   +AV  F+ MEE GC+P+   +  
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392

Query: 224 VISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I+   ++     A   ++  L     P+V+VYTN+V   CR     EAE +   M    
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKV 341
             P+V T++  I  LC  G++  A  VF +M +   C PN +T+N L+    KA+R E+ 
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
             +  ++   G E  + TYN L+   C  G    A++++  M+  G +P+  T NMI   
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILA 572

Query: 402 ISKLGDVNGAHRMYGKMK--DLKCEPNTVTY-NILMQMFATSKSTDMVLKLKKEMEENEV 458
             K G    A +M   +     K  P+ ++Y N++  +  ++   D V+ L++ M    +
Sbjct: 573 YCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLER-MISAGI 631

Query: 459 EPNVNTYRILITMY 472
            P++ T+ +LI  +
Sbjct: 632 VPSIATWSVLINCF 645



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 138/299 (46%), Gaps = 9/299 (3%)

Query: 237 AQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           A  FF S+ +   F+   + +  ++R     G +   + + ++MK+ G   +   +  VI
Sbjct: 59  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
               + G   RA ++F  + E GC+P+   +N+++   +  +R + +  VY  MKR G E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            +  TYN L+   CK+ K++ A K+L  M  KGC P+A ++  +   + ++G V     +
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +      EP    YN L+             +L +EM E  + PNV +Y  LI + C 
Sbjct: 239 AERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            G    A+ ++ +M++  C  P       +++     G      +L  +M+ RGF  +P
Sbjct: 294 SGQIELAFSFLTQMLKRGC-HPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQP 350



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 40/272 (14%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           + T+  L+  + + G    AV+ +N+M   GC P+ + ++ ++  LCR  +  EA+S  +
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG-IQPNVYTYSIVIDALCRC 300
            + K+   P V  +   ++G C AG +  AE+VFR+M+      PN+ TY+ ++D L + 
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +I  A+ +  E+   G E +S T+N L+     A      LQ+  +M   G   D IT 
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566

Query: 361 NFLIDCHCKDGKLE-------------------------------------DAIKVLNSM 383
           N +I  +CK GK E                                     D + +L  M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           +  G  P+ +T++++  C   L D+  AH  +
Sbjct: 627 ISAGIVPSIATWSVLINCFI-LDDIVRAHDQF 657



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 4/164 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+++   K  + + A+     +  R VE +  T++ L+     AGL   A+    +M 
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL---KDKFEPDVIVYTNLVRGWCRAGN 267
             G +PD+I  +++I   C++ +A  A    D +   + K+ PDVI YTN++ G CR+  
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNC 615

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
             +   +   M  AGI P++ T+S++I+       I RAHD F 
Sbjct: 616 REDGVILLERMISAGIVPSIATWSVLINCFIL-DDIVRAHDQFT 658


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 236/524 (45%), Gaps = 56/524 (10%)

Query: 52  LSPEETLISEKFHSL---IKDHHRKN----PNPSSNSNPSLNPDFTIPSLSLGFSQISTA 104
           L P +TL    FHSL   +  H   N    P+PSS  + S N D   P L    S+IS  
Sbjct: 2   LKPHKTLPRMCFHSLYFLLGSHQSSNFSSQPHPSSPLSISSNTD-PFPEL---VSKISII 57

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQ----------------VLSFFNWVTARPEFVHSP 148
            S SP+      E+S  + H IP L+                VL FF+WV+    F H  
Sbjct: 58  LS-SPTW-----ERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDM 111

Query: 149 DLYHEMINLAGKVRQFDLAWHF-IDLMKS--------RNVEI------------TVDTFS 187
             +  M+N   + R F  A +  I ++KS        R +++            T+ +FS
Sbjct: 112 SCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFS 171

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            L+ +  +  +       +  M   G  P+   F+ +I ILC K +  EA+     +   
Sbjct: 172 TLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHY 231

Query: 248 FE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PD   YT+L+ G C+ GN+  A  +F  M   G  PN  TYS +I+ LC  G++  A
Sbjct: 232 GACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEA 291

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            D+  EM++ G EP    +   +     A R+ + +++  +MK+ GC  +  TY  LI  
Sbjct: 292 MDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISG 351

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             +DGK E AI V + M+  G  P A T++ +   +   G    A  ++  M      PN
Sbjct: 352 LSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPN 411

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           T TYN++++ F +         +  +M +    PNV TY I+I +Y   G+ NNA + + 
Sbjct: 412 TETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLL- 470

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           EM++   LK  +  Y  ++    R G+L+    L  +MV+ G +
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 173/373 (46%), Gaps = 2/373 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      + + A   ++ M  + +E TV  ++I +     AG + EAV    +M+
Sbjct: 275 YSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMK 334

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC P+   ++ +IS L R  +   A   +   L D   P  + Y+ L+      G   
Sbjct: 335 KRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFE 394

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  M      PN  TY+++I   C  G I +A  +F +ML+ G  PN IT+N ++
Sbjct: 395 TALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            ++ K       +++   MK  G + DT TY  LI    + GKLE A  + N MV  G +
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N I      +  V+ A  ++ KM +    P++ TYN+++  F+ +         
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENF 574

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M +  + PNV TY   I   C  G  + A+K   EM +++   P    Y  ++  L 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM-KKRDYFPNLCTYSSLIDGLC 633

Query: 510 RAGQLQKHEELVE 522
           + GQ +  E L++
Sbjct: 634 QEGQAEDAERLLD 646



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 170/357 (47%), Gaps = 6/357 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK R     V T++ L+    R G    A+  +++M   G  P  + +S +I+ L  + R
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGR 392

Query: 234 ASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A + F+  L     P+   Y  +++G+C  G I +A  +F +M  AG  PNV TY+I
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I    + G +  A  +   M   G + ++ T+ NL+    +  + E    ++N+M   G
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + +TYN +I+ +    K++DA+ +   MV  G  P++ T+NM+    SK   ++ A 
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
              GKM      PN +TY   +     +  T +  K+  EM++ +  PN+ TY  LI   
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C  G   +A      ++++ C +P    Y  +++ L   G+  + ++LVE M  +G 
Sbjct: 633 CQEGQAEDA----ERLLDDGC-EPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGL 684



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 192/423 (45%), Gaps = 4/423 (0%)

Query: 107 ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           +    VR ++ KSC  R+   + +V+   + +    +F ++   +  ++   GK     L
Sbjct: 128 VPADNVRILMIKSC--RNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGL 185

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
                  M +  +   + TF+ +++     G   EA      +  YG  PD   ++ +I 
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+      A   FD + KD  +P+ + Y+ L+ G C  G + EA  +  EM   GI+P
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            V+ Y+I I +LC  G+   A  +  +M + GC PN  T+  L+    +  + E  + VY
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M   G     +TY+ LI+    +G+ E A+ +   M+     PN  T+N+I +    +
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  ++ +M      PN +TYNI++ ++      +  ++L + M+ N ++ +  TY
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI+ +   G   +A+    EM+E   + P    Y  ++       ++     L  KMV
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHG-ISPNVVTYNAIINGYLTVAKVDDALALFWKMV 544

Query: 526 DRG 528
           + G
Sbjct: 545 ESG 547



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 150/327 (45%), Gaps = 5/327 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   +  + + A+   + M    +   V T++ ++  Y+      +A+  F +M 
Sbjct: 485 YANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV 544

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  P    ++++IS   +  R SEA++F   + K    P+VI YT+ + G C+ G  S
Sbjct: 545 ESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTS 604

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++F EMK     PN+ TYS +ID LC+ GQ   A      +L+ GCEPN  T+  L+
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE----RLLDDGCEPNVDTYTTLV 660

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           R      R  +  Q+   MK+ G +     Y  L+   CK+ ++E A+K+ +SMV  G  
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ 720

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P  S +  +   + K      A  M+  M       + V + +L+        TD+ L+L
Sbjct: 721 PCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLEL 780

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMG 476
              ME      N  T  +L      +G
Sbjct: 781 LHVMESRNCTLNFQTRVMLARELSALG 807



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 176/412 (42%), Gaps = 33/412 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      +F+ A    + M S +     +T++++++ +   G   +A   F++M 
Sbjct: 380 YSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML 439

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + G +P+ I ++I+I I  ++   + A    + +K +  + D   Y NL+ G+ R G + 
Sbjct: 440 KAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLE 499

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F EM   GI PNV TY+ +I+      ++  A  +F +M+E G  P+S T+N ++
Sbjct: 500 HAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMI 559

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--- 386
               K +R  +      +M + G   + ITY   ID  CK+G+   A K+ + M ++   
Sbjct: 560 SGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYF 619

Query: 387 ----------------------------GCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
                                       GC PN  T+  + R +   G    A ++   M
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESM 679

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           K    +P+   Y  L+     +   +  LK+   M     +P ++ Y+ LI   C     
Sbjct: 680 KKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFR 739

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             A    + M+ +K       V+ ++L  L + G+     EL+  M  R  T
Sbjct: 740 QKAQCMFQTML-KKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCT 790



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 9/304 (2%)

Query: 105 HSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           H ISP+ V +  +I     V     +   L+ F W       V S   Y+ MI+   K  
Sbjct: 511 HGISPNVVTYNAIINGYLTVA---KVDDALALF-WKMVESGNVPSSGTYNMMISGFSKTN 566

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           +   A +F   M  + +   V T++  +    + G  + A   F+ M++    P+   +S
Sbjct: 567 RISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYS 626

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
            +I  LC++ +A +A+   D   D  EP+V  YT LVRG C  G   EA+++   MK  G
Sbjct: 627 SLIDGLCQEGQAEDAERLLD---DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           +QP+   Y  ++   C+  ++  A  +F  M+  G +P    +  L+    KA+  +K  
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            ++  M +    +D + +  L+D   K+G+ + ++++L+ M  + C  N  T  M+ R +
Sbjct: 744 CMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLAREL 803

Query: 403 SKLG 406
           S LG
Sbjct: 804 SALG 807



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 156/337 (46%), Gaps = 12/337 (3%)

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWH-FIDLMKSR 177
           G   G  L    S FN +    E   SP++  Y+ +IN    V + D A   F  +++S 
Sbjct: 491 GFSRGGKLEHAFSLFNEMV---EHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           NV  +  T+++++  + +    +EA +   +M + G  P+ I ++  I  LC+  R S A
Sbjct: 548 NVP-SSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLA 606

Query: 238 QSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
              F  +K + + P++  Y++L+ G C+ G   +AER+  +    G +PNV TY+ ++  
Sbjct: 607 FKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRG 662

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LC  G+   A  +   M + G +P+   +  L+    K    E  L++++ M   G +  
Sbjct: 663 LCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPC 722

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
              Y  LI   CK    + A  +  +M++K  N +   + ++   + K G+ + +  +  
Sbjct: 723 LSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLH 782

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            M+   C  N  T  +L +  +    +  + ++ K++
Sbjct: 783 VMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQL 819


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 175/337 (51%), Gaps = 2/337 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+    R   A+EAV   +RM   GC PD + + IV++ LC++     A S    +
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            + K EP V++Y  ++   C   N+++A  +F EM   GI+PNV TY+ +I  LC  G+ 
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  + ++M+E    PN +TF+ L+   VK  +  +  ++Y++M +   + D  TY+ L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C   +L++A  +   M+ K C PN  T+N + +   K   V+    ++ +M     
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             NTVTY  L+  F  ++  D    + K+M  + V P++ TY IL+   C  G    A  
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL- 486

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            + E ++   ++P    Y ++++ + +AG+++   +L
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 2/371 (0%)

Query: 146 HSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           H+   Y  +IN   +  Q  LA   +  M     E  + T + L+  +      ++AV  
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
             +M E G  PD   F+ +I  L R  RASEA +  D +  K  +PD++ Y  +V G C+
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G+I  A  + ++M+   I+P V  Y+ +IDALC    +  A ++F EM   G  PN +T
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N+L+R      R     ++ + M       + +T++ LID   K+GKL +A K+ + M+
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           ++  +P+  T++ +         ++ A  M+  M    C PN VTYN L++ F  +K  D
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             ++L +EM +  +  N  TY  LI  +      +NA    ++M+ +  L P    Y ++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSIL 472

Query: 505 LQQLRRAGQLQ 515
           L  L   G+++
Sbjct: 473 LDGLCNNGKVE 483



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 153/288 (53%), Gaps = 1/288 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D +K +  P ++ ++ L+    +         +  +M+  GI  N+YTYSI+I+  CR
Sbjct: 69  FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR 128

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             Q++ A  V A+M+++G EP+ +T N+L+      +R    + +  QM  +G + D+ T
Sbjct: 129 RSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT 188

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N LI    +  +  +A+ +++ MV KGC P+  T+ ++   + K GD++ A  +  KM+
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K EP  V YN ++      K+ +  L L  EM+   + PNV TY  LI   C  G W+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +A + + +MIE K + P    +  ++    + G+L + E+L ++M+ R
Sbjct: 309 DASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 4/396 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F + V +RP    S   + ++++   K+ +FDL     + M++  +   + T+SIL+  +
Sbjct: 69  FGDMVKSRP--FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCF 126

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
            R    + A+    +M + G  PD +  + +++  C   R S+A S    + +  ++PD 
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +  L+ G  R    SEA  +   M + G QP++ TY IV++ LC+ G I  A  +  +
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M +   EP  + +N ++            L ++ +M   G   + +TYN LI C C  G+
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             DA ++L+ M+ +  NPN  TF+ +     K G +  A ++Y +M     +P+  TY+ 
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F      D    + + M   +  PNV TY  LI  +C     +   +  REM  ++
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQR 425

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L   +  Y  ++    +A +    + + ++MV  G
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 182/405 (44%), Gaps = 14/405 (3%)

Query: 139 TARPEFVHSP-----------DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           TA P F H             D     IN    ++  D    F D++KSR     V+ FS
Sbjct: 27  TAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVE-FS 85

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KD 246
            L+    +       +    +M+  G + +   +SI+I+  CR+ + S A +    + K 
Sbjct: 86  KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL 145

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
            +EPD++   +L+ G+C    IS+A  +  +M   G QP+ +T++ +I  L R  + + A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +   M+  GC+P+ +T+  ++    K    +  L +  +M++   E   + YN +ID 
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C    + DA+ +   M  KG  PN  T+N + RC+   G  + A R+   M + K  PN
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VT++ L+  F          KL  EM +  ++P++ TY  LI  +C     + A     
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            MI + C  P    Y  +++   +A ++ +  EL  +M  RG   
Sbjct: 386 LMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 3/368 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+     +  + A +    M ++ +   V T++ L+R     G  ++A    + M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            E    P+ + FS +I    ++ +  EA+  +D + K   +PD+  Y++L+ G+C    +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+ +F  M      PNV TY+ +I   C+  ++    ++F EM + G   N++T+  L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +A   +    V+ QM   G   D +TY+ L+D  C +GK+E A+ V   + R   
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N++   + K G V     ++  +     +PN VTY  +M  F      +    
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L +EM+E    P+  TY  LI  +   G    + + IREM    C   G +    ++  +
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSCRFVGDASTIGLVTNM 615

Query: 509 RRAGQLQK 516
              G+L K
Sbjct: 616 LHDGRLDK 623



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 166/395 (42%), Gaps = 44/395 (11%)

Query: 94  LSLGFSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 151
           L+L   +      I P  V +  +I+  C  ++    L + +  +    RP  V     Y
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT----Y 294

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
           + +I       ++  A   +  M  R +   V TFS L+  +V+ G   EA   ++ M +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNIS 269
               PD   +S +I+  C   R  EA+  F+ +  KD F P+V+ Y  L++G+C+A  + 
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVD 413

Query: 270 EAERVFREMKMAG-----------------------------------IQPNVYTYSIVI 294
           E   +FREM   G                                   + P++ TYSI++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           D LC  G++  A  VF  +     EP+  T+N ++    KA + E    ++  +   G +
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            + +TY  ++   C+ G  E+A  +   M  +G  P++ T+N + R   + GD   +  +
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
             +M+  +   +  T  ++  M    +     LK+
Sbjct: 594 IREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKM 628


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 191/374 (51%), Gaps = 7/374 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L GKV++   A  F D + ++   ++  ++ IL+    + G    A+    R+E +   P
Sbjct: 140 LEGKVKE---ALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRP 196

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + +S++I  LC+     EA   +  +  K   PDV+ Y+ LV G+C  G ++ A  + 
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I P++YTY+I++DALC+ G++  A +V A M++     + + ++ LM  +   
Sbjct: 257 NEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLV 316

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
           +      +V+  M ++G   D   Y+ +I+  CK  ++++A+ +   + +K   P+  T+
Sbjct: 317 NEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTY 376

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             +  C+ K G ++    ++ +M D    P+ +TYN L+     +   D  + L  +M++
Sbjct: 377 TSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKD 436

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK-CLKPGSSVYEMVLQQLRRAGQL 514
             + PNV T+ IL+   C +G   NA ++ ++++ +  CL   +  Y +++  L + G L
Sbjct: 437 QAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRT--YTVMINGLCKEGLL 494

Query: 515 QKHEELVEKMVDRG 528
            +   L  +M D G
Sbjct: 495 DEALALQSRMEDNG 508



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 191/402 (47%), Gaps = 12/402 (2%)

Query: 94  LSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHE 153
           L+ GF     ++ I  + V  + E    +R    LL+ +    W + RP  V    +Y  
Sbjct: 155 LAQGFRLSGISYGILINGVCKIGETRAAIR----LLRRIE--RW-SIRPNVV----IYSM 203

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I+   K    D A+     M  + +   V T+SILV  +   G    A+   N M    
Sbjct: 204 IIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLEN 263

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             PD   ++I++  LC++ +  EA++    + K     DV+VY+ L+ G+C    ++ A+
Sbjct: 264 INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAK 323

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           RVF  M   G+ P+V+ YSI+I+ LC+  ++  A ++F E+ +    P+++T+ +L+   
Sbjct: 324 RVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCL 383

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K+ R   V  ++++M   G   D ITYN LID  CK+G L+ AI + N M  +   PN 
Sbjct: 384 CKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNV 443

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF ++   + K+G +  A   +  +       N  TY +++         D  L L+  
Sbjct: 444 YTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSR 503

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           ME+N    +  T+ I+I  +      + A K +REMI    L
Sbjct: 504 MEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 187/401 (46%), Gaps = 3/401 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L F + V A+  F  S   Y  +IN   K+ +   A   +  ++  ++   V  +S++
Sbjct: 146 EALRFHDKVLAQG-FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMI 204

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKF 248
           + R  +  L  EA   +  M   G +PD + +SI++S  C   + + A    + +  +  
Sbjct: 205 IDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENI 264

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PD+  YT LV   C+ G + EAE V   M  A +  +V  YS ++D  C   ++  A  
Sbjct: 265 NPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKR 324

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           VF  M ++G  P+   ++ ++    K  R ++ L ++ ++ +     DT+TY  LIDC C
Sbjct: 325 VFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLC 384

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K G++     + + M+ +G  P+  T+N +   + K G ++ A  ++ KMKD    PN  
Sbjct: 385 KSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVY 444

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+ IL+            L+  +++       NV TY ++I   C  G  + A      M
Sbjct: 445 TFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRM 504

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +  C+    + +E++++      +  K E+LV +M+ RG 
Sbjct: 505 EDNGCISDAVT-FEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 173/374 (46%), Gaps = 4/374 (1%)

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           V+++  A      M+   VE    T +I++  +   G    A    +++ + G  P+ I 
Sbjct: 71  VKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTIT 130

Query: 221 FSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
            + ++  LC + +  EA  F D  L   F    I Y  L+ G C+ G    A R+ R ++
Sbjct: 131 LNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIE 190

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
              I+PNV  YS++ID LC+   +  A+D++ EM+  G  P+ +T++ L+       +  
Sbjct: 191 RWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLN 250

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           + + + N+M       D  TY  L+D  CK+GK+++A  VL  MV+   N +   ++ + 
Sbjct: 251 RAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLM 310

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
                + +VN A R++  M  +   P+   Y+I++      K  D  L L +E+ +  + 
Sbjct: 311 DGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMV 370

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+  TY  LI   C  G  +  +    EM+ ++   P    Y  ++  L + G L +   
Sbjct: 371 PDTVTYTSLIDCLCKSGRISYVWDLFDEML-DRGQPPDVITYNNLIDALCKNGHLDRAIA 429

Query: 520 LVEKMVDRGFTARP 533
           L  KM D+    RP
Sbjct: 430 LFNKMKDQAI--RP 441



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 151/366 (41%), Gaps = 37/366 (10%)

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTN 257
           A +AV  FN M      P    F+ ++  L   +R   A S +  ++  + EPD      
Sbjct: 39  ADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++  +C  G +  A     ++   G QPN  T + ++  LC  G++  A     ++L  G
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD------- 370
              + I++  L+    K   T   +++  +++R     + + Y+ +ID  CKD       
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218

Query: 371 ----------------------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
                                       G+L  AI +LN MV +  NP+  T+ ++   +
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            K G V  A  +   M       + V Y+ LM  +      +   ++   M +  V P+V
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDV 338

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           + Y I+I   C +   + A     E I +K + P +  Y  ++  L ++G++    +L +
Sbjct: 339 HCYSIMINGLCKIKRVDEALNLFEE-IHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFD 397

Query: 523 KMVDRG 528
           +M+DRG
Sbjct: 398 EMLDRG 403


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 207/461 (44%), Gaps = 80/461 (17%)

Query: 142 PEFVHSPDLYHEMINLAG----KVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           PE    PDL+   I L G    K  Q   DL  H +   K R   + V  ++ ++   +R
Sbjct: 163 PELGCKPDLFSYTILLKGLCDDKTSQQALDL-LHIMADHKGR-CPLDVVAYTTVINGLLR 220

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIV 254
            G   +A   F+ M + G +PD + +S +IS L + +   +A Q F   +K+   PD I+
Sbjct: 221 EGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIM 280

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           YT+LV G+C +G   EA  +F++M   G++P+V TY+ ++D LC+ G+ T A  +F  ++
Sbjct: 281 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 340

Query: 315 EVGCEPNSIT-----------------------------------FNNLMRVHVKASRTE 339
           + G +P+S T                                   FN +M  + K ++ +
Sbjct: 341 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 400

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF---- 395
           + L V++ M++ G   D + Y  ++D  C  G+++DA+   NS+  +G  PN   F    
Sbjct: 401 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 460

Query: 396 -------------------------------NMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
                                          N I   + K G V  A  ++  M  +  E
Sbjct: 461 HGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIE 520

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PNT TYN L+  +      D  +KL   M  N V+P+  TY  +I  Y   G   +    
Sbjct: 521 PNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTL 580

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           +REM + K + PG   YEM+LQ L +AG+    +EL  +M+
Sbjct: 581 LREM-DGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 620



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 161/327 (49%), Gaps = 4/327 (1%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD---KFEPDVIVYTNLVRGW 262
             RM E GC PD  +++I++  LC  + + +A      + D   +   DV+ YT ++ G 
Sbjct: 159 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGL 218

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            R G + +A  +F  M   G  P+V TYS +I AL +   + +A  VF  M++ G  P+ 
Sbjct: 219 LREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC 278

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           I + +L+  +  + + ++ + ++ +M R G E D +TY  L+D  CK+GK  +A K+ +S
Sbjct: 279 IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 338

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +V++G  P+++T+  +    +  G +   H +   M     +     +N++M  +A    
Sbjct: 339 LVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNK 398

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  L +   M +  + P++  Y  ++ + C  G  ++A      +  E  L P   V+ 
Sbjct: 399 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG-LAPNIVVFT 457

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  L    +  K EEL  +M+DRG 
Sbjct: 458 TLIHGLCTCDKWDKVEELAFEMIDRGI 484



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 50/336 (14%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD-- 149
           P  ++G  +    H + P  V +        ++G    +    F+ +  R    H PD  
Sbjct: 294 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST-EARKIFDSLVKRG---HKPDST 349

Query: 150 ----LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
               L H        V   DL    +DLM  + +++    F++++  Y +     EA+  
Sbjct: 350 TYGTLLHGYATEGALVEMHDL----LDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLV 405

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRG--- 261
           F+ M + G  PD + +  V+ ILC   R  +A S F+SLK +   P+++V+T L+ G   
Sbjct: 406 FSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCT 465

Query: 262 ---W-----------------------------CRAGNISEAERVFREMKMAGIQPNVYT 289
              W                             C+ G + EA+ +F  M   GI+PN  T
Sbjct: 466 CDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNT 525

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +ID  C  G++  A  +   M+  G +P+ +T+N ++  + +  R E  L +  +M 
Sbjct: 526 YNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMD 585

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             G     +TY  L+    + G+   A ++   M++
Sbjct: 586 GKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 11/308 (3%)

Query: 231 KRRASE---AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ--- 284
           ++RA+E   A   FD L  + +   I   N         + + A  +F  M  AG     
Sbjct: 37  RQRATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAA 96

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC--EPNSITFNNLMRVHVKASRTEKVL 342
           PN+ TY IVI    R G++  A      ++  G   EPN +  ++   +     R  ++ 
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMD 156

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV-RKG-CNPNASTFNMIFR 400
            V  +M  LGC+ D  +Y  L+   C D   + A+ +L+ M   KG C  +   +  +  
Sbjct: 157 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 216

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + G ++ A+ ++  M D    P+ VTY+ ++   + +++ D   ++   M +N V P
Sbjct: 217 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 276

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +   Y  L+  YC  G    A    ++M     ++P    Y  ++  L + G+  +  ++
Sbjct: 277 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG-VEPDVVTYTALMDYLCKNGKSTEARKI 335

Query: 521 VEKMVDRG 528
            + +V RG
Sbjct: 336 FDSLVKRG 343


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 226/513 (44%), Gaps = 89/513 (17%)

Query: 94  LSLGFSQ----ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD 149
           L L F+     I+T   +SP     +++  C  R     + ++     +   PE    PD
Sbjct: 115 LDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIV-----LRRMPELGCKPD 169

Query: 150 LYHEMINLAG----KVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           L+   I L G    K  Q   DL  H +   K R   + V  ++ ++   +R G   +A 
Sbjct: 170 LFSYTILLKGLCDDKTSQQALDL-LHIMADHKGR-CPLDVVAYTTVINGLLREGQLDKAY 227

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGW 262
             F+ M + G +PD + +S +IS L + +   +A Q F   +K+   PD I+YT+LV G+
Sbjct: 228 SLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGY 287

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C +G   EA  +F++M   G++P+V TY+ ++D LC+ G+ T A  +F  +++ G +P+S
Sbjct: 288 CSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDS 347

Query: 323 IT-----------------------------------FNNLMRVHVKASRTEKVLQVYNQ 347
            T                                   FN +M  + K ++ ++ L V++ 
Sbjct: 348 TTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSN 407

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF------------ 395
           M++ G   D + Y  ++D  C  G+++DA+   NS+  +G  PN   F            
Sbjct: 408 MRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDK 467

Query: 396 -----------------------NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
                                  N I   + K G V  A  ++  M  +  EPNT TYN 
Sbjct: 468 WDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNT 527

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  +      D  +KL   M  N V+P+  TY  +I  Y   G   +    +REM + K
Sbjct: 528 LIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREM-DGK 586

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            + PG   YEM+LQ L +AG+    +EL  +M+
Sbjct: 587 GVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 195/404 (48%), Gaps = 7/404 (1%)

Query: 132 LSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           +S FN +        +P++  Y  +I    ++ + DLA+  +  + +  + ++   FS L
Sbjct: 81  ISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPL 140

Query: 190 VRRYVRAGLAAEAVH-AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-- 246
           ++        ++A+     RM E GC PD  +++I++  LC  + + +A      + D  
Sbjct: 141 LKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK 200

Query: 247 -KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
            +   DV+ YT ++ G  R G + +A  +F  M   G  P+V TYS +I AL +   + +
Sbjct: 201 GRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDK 260

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  VF  M++ G  P+ I + +L+  +  + + ++ + ++ +M R G E D +TY  L+D
Sbjct: 261 ATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMD 320

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK+GK  +A K+ +S+V++G  P+++T+  +    +  G +   H +   M     + 
Sbjct: 321 YLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 380

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
               +N++M  +A     D  L +   M +  + P++  Y  ++ + C  G  ++A    
Sbjct: 381 GHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQF 440

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +  E  L P   V+  ++  L    +  K EEL  +M+DRG 
Sbjct: 441 NSLKSEG-LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGI 483



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 50/336 (14%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD-- 149
           P  ++G  +    H + P  V +        ++G    +    F+ +  R    H PD  
Sbjct: 293 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST-EARKIFDSLVKRG---HKPDST 348

Query: 150 ----LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
               L H        V   DL    +DLM  + +++    F++++  Y +     EA+  
Sbjct: 349 TYGTLLHGYATEGALVEMHDL----LDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLV 404

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRG--- 261
           F+ M + G  PD + +  V+ ILC   R  +A S F+SLK +   P+++V+T L+ G   
Sbjct: 405 FSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCT 464

Query: 262 ---W-----------------------------CRAGNISEAERVFREMKMAGIQPNVYT 289
              W                             C+ G + EA+ +F  M   GI+PN  T
Sbjct: 465 CDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNT 524

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +ID  C  G++  A  +   M+  G +P+ +T+N ++  + +  R E  L +  +M 
Sbjct: 525 YNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMD 584

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             G     +TY  L+    + G+   A ++   M++
Sbjct: 585 GKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 203/438 (46%), Gaps = 13/438 (2%)

Query: 95  SLGFSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYH 152
           SL F     A       V +  ++   C +      L++L      + RP  V    +Y+
Sbjct: 99  SLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVV----MYN 154

Query: 153 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
            +I+   K +  + A+     M +R +   V T+S L+  +  AG   EA    N M   
Sbjct: 155 TIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILK 214

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEA 271
              P+   ++I++  LC++ +  EA++    + K+  +P+V+ Y  L+ G+C  G +  A
Sbjct: 215 NINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNA 274

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           +++F  M   G+ PNVY+Y+I+ID LC+  ++  A ++  E+L     PN++T+++L+  
Sbjct: 275 KQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDG 334

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K  R    L +  +M   G  AD +TY  L+D  CK+  L+ A  +   M  +G  PN
Sbjct: 335 FCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPN 394

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+  +   + K G    A +++  +    C  N  TYN+++         D  L +K 
Sbjct: 395 KYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKS 454

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           +MEEN   P+  T+ I+I         + A K + EMI +  L+      E      R  
Sbjct: 455 KMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDFHGE------RSP 508

Query: 512 GQLQKHEELVEKMVDRGF 529
            +  K E+L+ +M+ +G 
Sbjct: 509 NENDKAEKLLHEMIAKGL 526



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 190/373 (50%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   + HF D + ++  ++   +++ L+    + G    A+     +E+    P
Sbjct: 92  LKGEVKK---SLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + ++ +I  LC+ +  +EA   +  +  +   P+VI Y+ L+ G+C AG + EA  + 
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I PNVYTY+I++DALC+ G++  A ++ A M + G +PN +++N LM  +   
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +   Q+++ M + G   +  +YN +ID  CK  ++++A+ +L  ++ K   PN  T+
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           + +     KLG +  A  +  +M       + VTY  L+     +++ D    L  +M+E
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             ++PN  TY  LI   C  G   NA K  + ++ + C +     Y +++  L + G L 
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGC-RINVWTYNVMISGLCKEGMLD 447

Query: 516 KHEELVEKMVDRG 528
           +   +  KM + G
Sbjct: 448 EALAMKSKMEENG 460



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 181/381 (47%), Gaps = 4/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +++++    K++ +  A      M+ + +E  + T +IL+  +   G    +     ++ 
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ I  + ++  LC K    ++  F D  +   F+ D + Y  L+ G C+ G   
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++ R ++    +PNV  Y+ +ID LC+   +  A+D+++EM   G  PN IT++ L+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                A +  +   + N+M       +  TY  L+D  CK+GK+++A  +L  M ++G  
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  ++N +      +G+V  A +M+  M      PN  +YNI++     SK  D  + L
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQL 508
            +E+    + PN  TY  LI  +C +G   +A   ++EM      +P   V Y  +L  L
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRG--QPADVVTYTSLLDAL 370

Query: 509 RRAGQLQKHEELVEKMVDRGF 529
            +   L K   L  KM +RG 
Sbjct: 371 CKNQNLDKATALFMKMKERGI 391



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 140/279 (50%), Gaps = 1/279 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P ++ +  +V    +  +   A  +F++M++ GI+P+++T +I+I+  C  GQ+T +  V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             ++L++G +PN+IT N LM+        +K L  ++++   G + D ++Y  L++  CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G+   A+K+L  +  +   PN   +N I   + K   VN A+ +Y +M      PN +T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+ L+  F  +        L  EM    + PNV TY IL+   C  G    A   +  M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +E  +KP    Y  ++      G++Q  +++   MV +G
Sbjct: 248 KEG-VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 36/251 (14%)

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           ML V   P  + FN ++   VK       + ++ QM+  G E D  T N LI+C C  G+
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFR--CIS--------------------------- 403
           +  +  VL  +++ G  PN  T N + +  C+                            
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 404 ------KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
                 K+G+   A ++   ++D    PN V YN ++      K  +    L  EM+   
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + PNV TY  LI  +C  G    A+  + EMI  K + P    Y +++  L + G++++ 
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI-LKNINPNVYTYTILMDALCKEGKVKEA 239

Query: 518 EELVEKMVDRG 528
           + L+  M   G
Sbjct: 240 KNLLAVMTKEG 250


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 186/382 (48%), Gaps = 2/382 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++ +  K  Q  LA   +  M+ R +++    +SI++    + G    A + FN ME
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G   D I ++ +I   C   R  +      D +K K  PDV+ ++ L+  + + G + 
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE + +EM   GI P+  TY+ +ID  C+  Q+ +A+ +   M+  GC PN  TFN L+
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA+  +  L+++ +M   G  ADT+TYN LI   C+ GKLE A ++   MV +   
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  ++ ++   +   G+   A  ++ K++  K E +   YNI++     +   D    L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+P+V TY I+I   C  G  + A    R+M EE    P    Y ++++   
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM-EEDGHSPNGCTYNILIRAHL 573

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
             G   K  +L+E++   GF+ 
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSV 595



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 185/372 (49%), Gaps = 2/372 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   + R+  LA+  +  +     E    TFS L+      G  +EA+   +RM E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P  I  + +++ LC   + S+A    D + +  F+P+ + Y  +++  C++G  + A 
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + R+M+   I+ +   YSI+ID LC+ G +  A ++F EM   G + + I +  L+R  
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
             A R +   ++   M +     D + ++ LIDC  K+GKL +A ++   M+++G +P+ 
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+  +     K   ++ A+ M   M    C PN  T+NIL+  +  +   D  L+L ++
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M    V  +  TY  LI  +C +G    A +  +EM+  + ++P    Y+++L  L   G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNG 471

Query: 513 QLQKHEELVEKM 524
           + +K  E+ EK+
Sbjct: 472 EPEKALEIFEKI 483



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 166/382 (43%), Gaps = 53/382 (13%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y  +I+   K  Q D A H +DLM S+     + TF+IL+  Y +A L  + + 
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408

Query: 205 AFNRMEEYGCA-----------------------------------PDKIAFSIVISILC 229
            F +M   G                                     PD +++ I++  LC
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
                 +A   F+ + K K E D+ +Y  ++ G C A  + +A  +F  + + G++P+V 
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+I+I  LC+ G ++ A  +F +M E G  PN  T+N L+R H+      K  ++  ++
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR--CISKLG 406
           KR G   D  T  F             A+  L  M++ G  P+  TF  + R  C+ +  
Sbjct: 589 KRCGFSVDASTLRF-------------ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENA 635

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V  A  ++  MK +  +PN VTYN +++          V  +  +M E   +PN  T  
Sbjct: 636 SVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKS 695

Query: 467 ILITMYCGMGHWNNAYKYIREM 488
             I+  C      +A   +R+M
Sbjct: 696 TFISGLCKQDLHGSAILLLRKM 717



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 149/281 (53%), Gaps = 1/281 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +I ++ L     R         + ++M++ GI  N+YT SI+I+  CRC +++ A   
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +++++G EP+++TF+ L+       R  + L++ ++M  +G +   IT N L++  C 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +GK+ DA+ +++ MV  G  PN  T+  + + + K G    A  +  KM++ K + + V 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+I++       S D    L  EME    + ++  Y  LI  +C  G W++  K +R+MI
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           + K + P    +  ++    + G+L++ EEL ++M+ RG +
Sbjct: 310 KRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 179/403 (44%), Gaps = 38/403 (9%)

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           +++ D    F ++ +SR     +D FS L     R       +    +ME  G A +   
Sbjct: 51  IKEDDAVDLFQEMTRSRPRPRLID-FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
            SI+I+  CR R+ S A S    + K  +EPD + ++ L+ G C  G +SEA  +   M 
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G +P + T + +++ LC  G+++ A  +   M+E G +PN +T+  +++V  K+ +T 
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL-------------------------- 373
             +++  +M+    + D + Y+ +ID  CKDG L                          
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 374 ---------EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
                    +D  K+L  M+++   P+   F+ +  C  K G +  A  ++ +M      
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+TVTY  L+  F      D    +   M      PN+ T+ ILI  YC     ++  + 
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            R+M   + +   +  Y  ++Q     G+L+  +EL ++MV R
Sbjct: 410 FRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 166/344 (48%), Gaps = 5/344 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           ++D     +  M  R +   V  FS L+  +V+ G   EA      M + G +PD + ++
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I   C++ +  +A    D +  K   P++  +  L+ G+C+A  I +   +FR+M + 
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+  +  TY+ +I   C  G++  A ++F EM+     P+ +++  L+         EK 
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+++ ++++   E D   YN +I   C   K++DA  +  S+  KG  P+  T+N++   
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K G ++ A  ++ KM++    PN  TYNIL++            KL +E++      +
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596

Query: 462 VNTYRILITMYCGM---GHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +T R  ++    M   GH  + + +   ++   CL+  +SVY+
Sbjct: 597 ASTLRFALSTLARMLKAGHEPDVFTFT-TLLRPFCLEENASVYD 639


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 189/386 (48%), Gaps = 4/386 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ +++   K R  D A  F+  M ++ V     T++ L+  Y   G   EAV  
Sbjct: 252 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 311

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
           F  M  +   PD +  S+++  LC+  +  EA+  FD++  K + PDV  Y  ++ G+  
Sbjct: 312 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 371

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +   +F  M   GI P+ YT++++I A   CG + +A  +F EM + G +P+ +T
Sbjct: 372 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 431

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    +  + +  ++ +NQM   G   D   YN LI   C  G L  A ++++ ++
Sbjct: 432 YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 491

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G + +   F+ I   + KLG V  A  ++    ++   P+ V Y++LM  +      +
Sbjct: 492 NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKME 551

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L++   M    +EPNV  Y  L+  YC +G  +      REM+ ++ +KP + +Y ++
Sbjct: 552 KALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML-QRGIKPSTILYSII 610

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L +AG+    +    +M + G  
Sbjct: 611 IDGLFQAGRTVPAKVKFHEMTESGIA 636



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 234/482 (48%), Gaps = 35/482 (7%)

Query: 55  EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRH 114
           E TL  E+ H L+ +  R+         P L  D        GF     A + +PS    
Sbjct: 40  EGTLRPEEAHDLLDELQRR-------GTPVLERDLN------GFL---AALARAPS---- 79

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHF 170
               S   R G P L V + FN   +R +   V SP    Y  +++   +  + +LA  F
Sbjct: 80  ----SAACRSG-PALAV-ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAF 133

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILC 229
              +    + + +   + L+  +  A    EA+    +R  E GC PD  ++SI++  LC
Sbjct: 134 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193

Query: 230 RKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            + ++ +A      + +      P+V+ Y  ++ G+ + G++++A  +F+EM   GI P+
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + TY+ V+ ALC+   + +A     +M+     PN+ T+NNL+  +    + ++ ++V+ 
Sbjct: 254 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+R     D +T + L+   CK GK+++A  V ++M  KG NP+  ++N++    +  G
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +     ++  M      P+  T+N+L++ +A     D  + +  EM ++ V+P+V TYR
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C +G  ++A +   +MI++  + P    Y  ++Q     G L K +EL+ ++++
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 492

Query: 527 RG 528
            G
Sbjct: 493 NG 494



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 209/429 (48%), Gaps = 12/429 (2%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           HSI P  V   +      ++G  + +    F+ +  + +   +PD++   I L G   + 
Sbjct: 318 HSILPDVVTLSMLMGSLCKYG-KIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATKG 373

Query: 165 DLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
            L       DLM    +     TF++L++ Y   G+  +A+  FN M ++G  PD + + 
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            VI+ LCR  +  +A   F+ + D+   PD   Y  L++G+C  G++ +A+ +  E+   
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 493

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+  ++  +S +I+ LC+ G++  A ++F   + VG  P+++ ++ LM  +    + EK 
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 553

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+V++ M   G E + + Y  L++ +CK G++++ + +   M+++G  P+   +++I   
Sbjct: 554 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 613

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + + G    A   + +M +     +  TYNI+++    ++  D  + L KE+    V+ N
Sbjct: 614 LFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 462 VNTYRILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           + T   L TM  GM         K +   I    L P    Y +++  L + G +++ E+
Sbjct: 674 IIT---LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 730

Query: 520 LVEKMVDRG 528
           +   M + G
Sbjct: 731 MFSSMQNAG 739



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 135/266 (50%), Gaps = 1/266 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   I  + +  + + +  FS ++    + G   +A + F+     G  PD + +S+++ 
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 542

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C   +  +A   FD++     EP+V+VY  LV G+C+ G I E   +FREM   GI+P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 602

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +   YSI+ID L + G+   A   F EM E G   +  T+N ++R   K    ++ + ++
Sbjct: 603 STILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 662

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +++ +  + + IT N +ID   +  ++E+A  +  S+ R    P+  T++++   + K 
Sbjct: 663 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 722

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYN 431
           G V  A  M+  M++  CEPN+   N
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPNSRLLN 748



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  ++N   K+ + D        M  R ++ +   +SI++    +AG    A   F+ M
Sbjct: 571 VYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEM 630

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
            E G A D   ++IV+  L + R   EA   F  L+    + ++I    ++ G  +   +
Sbjct: 631 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 690

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+ +F  +  + + P+V TYSI+I  L + G +  A D+F+ M   GCEPNS   N++
Sbjct: 691 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 750

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +R  +K +   +     +++       + +T   L+D     G   + I+ L
Sbjct: 751 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 164/354 (46%), Gaps = 5/354 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MKS  +E  V T+++L++   + G    A      M   GC PD ++++ VIS +C+   
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             +A+     L  KFEP V VY  L+ G C+     EA  +  EM   G+ PNV +YS V
Sbjct: 230 VDKARE----LAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTV 285

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  L   G +  +  VF  M   GC PN  TF +L++      R    + ++N M R G 
Sbjct: 286 ISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGV 345

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + + YN LI   C DG +++AI V N M +    PN +T++ I    +K GD+  A  
Sbjct: 346 SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACE 405

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
            + KM +  C PN V Y  ++ +       D    L   M  +   P V T+   I   C
Sbjct: 406 TWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLC 465

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
             G    A   + +M + +CL P    Y  +L  L RA   ++   L+ ++ +R
Sbjct: 466 RAGRVEWAMNVLDQMEKYECL-PNIRTYNELLDGLFRANAFREACGLIRELEER 518



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 213/461 (46%), Gaps = 29/461 (6%)

Query: 72  RKNPNP---SSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPL 128
           RK+P P   ++N NP                + + + ++ P +  HV++    +R    +
Sbjct: 14  RKSPTPFVLATNPNP----------------EKANSLNVCPVSESHVVKV---LRQEHDI 54

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           +  L +F  ++    F H+   Y  MI+  G+  + D   + +  MK  NV  + + F  
Sbjct: 55  VSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQF 114

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DK 247
           +++ Y R+ L  + +  F R+ E+GC P    +++V+  L  +       + ++++K + 
Sbjct: 115 VIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEG 174

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            EP+V  Y  L++  C+ G +  A ++  EM   G  P+  +Y+ VI ++C+ G + +A 
Sbjct: 175 LEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAR 234

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           +     L +  EP    +N L+    K  R ++   + N+M   G + + I+Y+ +I C 
Sbjct: 235 E-----LAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCL 289

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
              G +E ++ V   M  +GC PN  TF  + +     G V  A  ++  M      PN 
Sbjct: 290 SDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNV 349

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           V YN L+    +  + D  + +  +ME++ + PNV TY  +I  +   G   +A +   +
Sbjct: 350 VAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNK 409

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           MI   C +P   VY  ++  L +     +  +L++ M+  G
Sbjct: 410 MINCGC-RPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDG 449



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 183/380 (48%), Gaps = 1/380 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+   K  +F  A+  ++ M  R V+  V ++S ++      G    ++  F RM
Sbjct: 246 VYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM 305

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNI 268
              GC P+   F+ +I     + R  +A   ++  +++   P+V+ Y  L+ G C  GN+
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  V+ +M+   I+PNV TYS +I    + G +  A + + +M+  GC PN + +  +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + V  + S  ++   + + M   GC    IT+N  I   C+ G++E A+ VL+ M +  C
Sbjct: 426 VDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYEC 485

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN  T+N +   + +      A  +  ++++ K E + VTYN +M  F+ +     VL+
Sbjct: 486 LPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQ 545

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L  +M  N ++ +  T    +  YC +G    A K +  +  EK  +     + ++L  +
Sbjct: 546 LLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGI 605

Query: 509 RRAGQLQKHEELVEKMVDRG 528
                 ++    + +M+ RG
Sbjct: 606 CNWLGTEEAVVYLHEMLKRG 625



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 141/300 (47%), Gaps = 40/300 (13%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y+ +I+        D A    + M+  ++   V T+S ++  + ++G    A  
Sbjct: 346 SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACE 405

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
            +N+M   GC P+ + ++ ++ +LC+     +A    D++  D   P VI + N ++G C
Sbjct: 406 TWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLC 465

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RAG +  A  V  +M+     PN+ TY+ ++D L R      A  +  E+ E   E + +
Sbjct: 466 RAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCV 525

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS- 382
           T+N +M         ++VLQ+  +M   G + DTIT N  ++ +CK GK++ AIKVL++ 
Sbjct: 526 TYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNI 585

Query: 383 -----------------------------------MVRKGCNPNASTFNMIFRC-ISKLG 406
                                              M+++G  PN +T+N++ R   SKLG
Sbjct: 586 SAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLG 645


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 2/317 (0%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           G AP  +A++ V+  L      S  +     L+D   P+V  Y  LVR  C  G   EA 
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174

Query: 273 RVFR-EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            V   +M+ AG  PNV TY+ ++ A CR G++  A  +   M E G  P+ +TFN ++  
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             KA R E   +++++M R G   D ++YN L+  +CK G L +A+ V   M +KG  P+
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             TF  +   + + G++  A  + G+M++     N  T+  L+  F  +   D  L   K
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM E  ++P+V  Y +LI  YC +G  + A + I EM E K +KP    Y  +L    + 
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM-EAKGMKPDVVTYSTILSGYCKI 413

Query: 512 GQLQKHEELVEKMVDRG 528
           G      EL  KM+ +G
Sbjct: 414 GDTDSAFELNRKMLKKG 430



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 178/354 (50%), Gaps = 2/354 (0%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M+       V T++ LV  + RAG    A      M E G  P  + F+ V++ LC+ 
Sbjct: 179 DDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKA 238

Query: 232 RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
            R  +A+  FD + ++   PD + Y  LV G+C+AG + EA  VF EM   G+ P+V T+
Sbjct: 239 GRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTF 298

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + +I A+CR G + RA  +  +M E G   N  TF  L+    +    +  L    +M+ 
Sbjct: 299 TSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRE 358

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
              +   + YN LI+ +CK G++++A ++++ M  KG  P+  T++ I     K+GD + 
Sbjct: 359 CRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDS 418

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  +  KM      P+ +TY+ L++     +      +L ++M +  ++P+  TY  LI 
Sbjct: 419 AFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLID 478

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            +C  G+   A     EMI++  L P    Y +++  L ++ + ++ + L+ K+
Sbjct: 479 GHCKEGNVQKALSLHDEMIKKGVL-PDVVTYSVLIDGLSKSARTKEAQRLLFKL 531



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 168/319 (52%), Gaps = 3/319 (0%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           G AP+   ++I++  LC + +  EA      D       P+V+ Y  LV  +CRAG +  
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           AER+   M+  G++P++ T++ V++ LC+ G++  A  +F EM   G  P+ +++N L+ 
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            + KA    + L V+ +M + G   D +T+  LI   C+ G LE A+ ++  M  +G   
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N  TF  +     + G ++ A     +M++ + +P+ V YN+L+  +      D   +L 
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            EME   ++P+V TY  +++ YC +G  ++A++  R+M+ +K + P +  Y  +++ L  
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML-KKGVVPDAITYSSLIRGLCE 447

Query: 511 AGQLQKHEELVEKMVDRGF 529
             +L    EL EKM+  G 
Sbjct: 448 ERRLGDACELFEKMLQLGL 466



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 178/364 (48%), Gaps = 3/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVI 225
           A   +  M    V   V T++ILVR     G   EA+    + M   GCAP+ + ++ ++
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           +  CR      A+     +++    P ++ +  +V G C+AG + +A ++F EM   G+ 
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT 257

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+  +Y+ ++   C+ G +  A  VFAEM + G  P+ +TF +L+    +A   E+ + +
Sbjct: 258 PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             QM+  G   +  T+  LID  C++G L+DA+  +  M      P+   +N++     K
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           LG ++ A  +  +M+    +P+ VTY+ ++  +     TD   +L ++M +  V P+  T
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAIT 437

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI   C      +A +   +M++   L+P    Y  ++    + G +QK   L ++M
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLG-LQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496

Query: 525 VDRG 528
           + +G
Sbjct: 497 IKKG 500



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 165/320 (51%), Gaps = 1/320 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++    +  + D A   + +M+   V  ++ TF+ +V    +AG   +A   F+ M 
Sbjct: 193 YNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMA 252

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  PD ++++ ++S  C+     EA + F  +  K   PDV+ +T+L+   CRAGN+ 
Sbjct: 253 REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLE 312

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +  +M+  G++ N +T++ +ID  CR G +  A     EM E   +P+ + +N L+
Sbjct: 313 RAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLI 372

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K  R ++  ++ ++M+  G + D +TY+ ++  +CK G  + A ++   M++KG  
Sbjct: 373 NGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV 432

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A T++ + R + +   +  A  ++ KM  L  +P+  TY  L+       +    L L
Sbjct: 433 PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSL 492

Query: 450 KKEMEENEVEPNVNTYRILI 469
             EM +  V P+V TY +LI
Sbjct: 493 HDEMIKKGVLPDVVTYSVLI 512



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 184/370 (49%), Gaps = 19/370 (5%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  + V   V TF+ L+    RAG    AV    +M E G   ++  F+ +I   CR   
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGF 345

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A      +++ + +P V+ Y  L+ G+C+ G + EA  +  EM+  G++P+V TYS 
Sbjct: 346 LDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST 405

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++   C+ G    A ++  +ML+ G  P++IT+++L+R   +  R     +++ +M +LG
Sbjct: 406 ILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLG 465

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + D  TY  LID HCK+G ++ A+ + + M++KG  P+  T++++   +SK      A 
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK---------------KEMEENE 457
           R+  K+      P+ + Y  LM    T++   +V  LK               + M +  
Sbjct: 526 RLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRH 585

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRAGQLQK 516
            + + + Y +LI  +C  G+   A  + ++++  +C   P S+    +++ L   G   +
Sbjct: 586 WKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL--RCGFSPNSTSTISLVRGLFEEGMTVE 643

Query: 517 HEELVEKMVD 526
            + +++++++
Sbjct: 644 ADNVIQELLN 653



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 16/272 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+ + D A   I  M+++ ++  V T+S ++  Y + G    A     +M 
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML 427

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD I +S +I  LC +RR  +A   F+  L+   +PD   YT L+ G C+ GN+ 
Sbjct: 428 KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +  EM   G+ P+V TYS++ID L +  +   A  +  ++      P++I +  LM
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547

Query: 330 RVHVKASRTEKVL---------------QVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
                A     V                +VY  M     + D   Y+ LI  HC+ G + 
Sbjct: 548 HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIM 607

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
            A+     ++R G +PN+++   + R + + G
Sbjct: 608 KALSFHKQLLRCGFSPNSTSTISLVRGLFEEG 639



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 16/237 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    + R+   A    + M    ++    T++ L+  + + G   +A+   + M 
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF------DSLKDKFEPDVIVY--------- 255
           + G  PD + +S++I  L +  R  EAQ         D + D  + + +++         
Sbjct: 498 KKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKS 557

Query: 256 -TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
              L++G+   G +++A++V++ M     + +   YS++I   CR G I +A     ++L
Sbjct: 558 VVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
             G  PNS +  +L+R   +   T +   V  ++      AD  T   LID + K+G
Sbjct: 618 RCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEG 674



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 3/145 (2%)

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  P+   +N +   +S    +  A R+   M      PN  TYNIL++        +  
Sbjct: 115 GYAPSLLAYNAVLLALSD-ASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 447 LKL-KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
           L +   +M      PNV TY  L+  +C  G  + A + +  M  E  ++P    +  V+
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVM-REGGVRPSLVTFNTVV 232

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFT 530
             L +AG+++   ++ ++M   G T
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLT 257


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 214/464 (46%), Gaps = 26/464 (5%)

Query: 86  NPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPL----LQVLSFFNWVTAR 141
           NP F  P   L F    +++     T  H ++  C + H +       Q  S  ++V +R
Sbjct: 84  NPYFLPPKSLLSFFDFLSSYP----TFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSR 139

Query: 142 PEFVHSPDLYHEMINLAGKVRQ---FDL-------------AWHFIDLMKSRNVEITVDT 185
                +  ++  ++   G +     FD              A     L K  N++I  + 
Sbjct: 140 KGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNG 199

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
              L+ R ++      A+  +  + + G  P+   F+++++ LC++ +  +AQ  FD + 
Sbjct: 200 CKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIR 259

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K   +P  + +  L+ G+C++GN+ E  R+   M+   + P+V+TYS +ID LC+  Q+ 
Sbjct: 260 KTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLE 319

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A+ +F EM + G  PN +TF  L+    K  R +  L++Y QM   G +AD + YN LI
Sbjct: 320 DANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLI 379

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  CK G   +A K +  M ++G  P+  T+  +     K GD+  A  M  +M     +
Sbjct: 380 DGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQ 439

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            + V +  ++             +  +EM    ++P+  TY +++  +C  G     +K 
Sbjct: 440 LDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKL 499

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++EM  +  + PG   Y +++  L + GQ++  + L+  M++ G
Sbjct: 500 LKEMQSDGHI-PGVITYNVLMNGLCKQGQVKNADMLLNAMLNLG 542


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 195/437 (44%), Gaps = 56/437 (12%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF---- 186
           +L +F W       +H+ + +  +++L    + ++     +D   ++N   +  T     
Sbjct: 90  ILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSF-AKNAHYSNSTIFHSL 148

Query: 187 --------------SILVRRYVRAGLAAEAVHAFNRMEEYG-------CAP--------- 216
                          +LV  YV+ G    A+  F+R  +YG       C P         
Sbjct: 149 SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEG 208

Query: 217 -------------------DKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYT 256
                              + + F +VI+ LC+  +  +A    + +K   F P VI Y 
Sbjct: 209 RIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN 268

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            ++ G+C+AG + +A+ + +EM    I PN  T++I+ID  CR   +T A  VF EM   
Sbjct: 269 TIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ 328

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G +PN +T+N+L+       + ++ L + ++M  +G + + +TYN LI+  CK   L++A
Sbjct: 329 GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            ++L+ + ++G  PN  TFN +     K G ++ A  +   M D    PN  TYN L+  
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVG 448

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           F    +     KL KEME N ++ ++ TY IL+   C  G    A + + EM E   L P
Sbjct: 449 FCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG-LNP 507

Query: 497 GSSVYEMVLQQLRRAGQ 513
               Y  ++    R G 
Sbjct: 508 SHLTYNALIDGYFREGN 524



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 186/357 (52%), Gaps = 2/357 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R + + V TF +++    + G   +A      M+ +G +P  I ++ +I   C+  +
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A +    +  K   P+ I +  L+ G+CR  N++ A++VF EM+  G+QPNV TY+ 
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I+ LC  G++  A  +  +M  +G +PN +T+N L+    K    ++  ++ + + + G
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + IT+N LID + K G+++DA  + + M+  G  PN ST+N +     + G+V  A 
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           ++  +M+    + + VTYNIL+        T   ++L  EM E  + P+  TY  LI  Y
Sbjct: 460 KLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGY 519

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              G+   A   +R ++E+K  +     Y ++++     G+L++   L+ +M+++G 
Sbjct: 520 FREGNSTAALN-VRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 575



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 183/363 (50%), Gaps = 2/363 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +IN   KV +F  A   ++ MK+     +V T++ ++  Y +AG   +A      M 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
                P++I F+I+I   CR    + A+  F+ + +   +P+V+ Y +L+ G C  G + 
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +  +M   G++PNV TY+ +I+  C+   +  A ++  ++ + G  PN ITFN L+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA R +    + + M   G   +  TYN LI   C++G +++A K+   M   G  
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +  T+N++   + K G+   A R+  +M ++   P+ +TYN L+  +    ++   L +
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNV 531

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
           +  ME+     N+ TY +LI  +C  G    A + + EM+ EK L P  + Y+++  ++ 
Sbjct: 532 RTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML-EKGLIPNRTTYDILRDEMM 590

Query: 510 RAG 512
             G
Sbjct: 591 EKG 593



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 7/279 (2%)

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I+   LV  + + G +  A   F      G + +  + + ++ +L + G+I     V+ E
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M+      N +TF+ ++    K  + +K   V   MK  G     ITYN +ID +CK GK
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +  A  +L  MV K  +PN  TFN++     +  +V  A +++ +M+    +PN VTYN 
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE- 491
           L+    ++   D  L L+ +M    ++PNV TY  LI  +C         K  REM+++ 
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK----KKMLKEAREMLDDI 395

Query: 492 --KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + L P    +  ++    +AG++     L   M+D G
Sbjct: 396 GKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 5/244 (2%)

Query: 291 SIVID----ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           SI++D    A  + G++  A + F    + G   ++++ N ++   VK  R   V  VY 
Sbjct: 159 SIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYK 218

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M R     + +T++ +I+  CK GK + A  V+  M   G +P+  T+N I     K G
Sbjct: 219 EMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAG 278

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +  A  +  +M   +  PN +T+NIL+  F   ++     K+ +EM+   ++PNV TY 
Sbjct: 279 KMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYN 338

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            LI   C  G  + A   +++ +    LKP    Y  ++    +   L++  E+++ +  
Sbjct: 339 SLINGLCSNGKLDEALG-LQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 527 RGFT 530
           RG  
Sbjct: 398 RGLA 401



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 1/226 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K +    A   +D +  R +   V TF+ L+  Y +AG   +A    + M 
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ +I   CR+    EA+     ++ +  + D++ Y  LV   C+ G   
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETR 491

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+  EM   G+ P+  TY+ +ID   R G  T A +V   M + G   N +T+N L+
Sbjct: 492 KAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLI 551

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           +      + E+  ++ N+M   G   +  TY+ L D   + G + D
Sbjct: 552 KGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 2/213 (0%)

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           GC  NSI  + L+  +VK    +  L+ +++    G     ++ N ++    K+G++   
Sbjct: 155 GC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
             V   M+R+    N  TF+++   + K+G    A  +   MK     P+ +TYN ++  
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           +  +        L KEM    + PN  T+ ILI  +C   +   A K   EM + + L+P
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM-QRQGLQP 332

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               Y  ++  L   G+L +   L +KM   G 
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 216/484 (44%), Gaps = 57/484 (11%)

Query: 96  LGFSQISTAHS--ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHE 153
           L FS++S   S   +P+    +I   C +     + + LS ++ V A         L + 
Sbjct: 100 LAFSELSRLKSSKFTPNVYGELIIVLCKME---LVEEALSMYHKVGAALTIQACNVLLYV 156

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++    K  +F+L W   + M S  +  +V TF  L+    R G    A   F+ M   G
Sbjct: 157 LV----KTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKG 212

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
             P  I ++I+I  LC   +  EA+S   ++++    P+V  Y  L+ G+C+  N  +A 
Sbjct: 213 IVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQAL 272

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R++++M   G+ P+V T+ I+ID LC+ G++  A ++F  M++    PN   +N+L+  +
Sbjct: 273 RLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAY 332

Query: 333 VK-----------------------------------ASRTEKVLQVYNQMKRLGCEADT 357
            K                                    SRTE+   ++ +M + G  A++
Sbjct: 333 CKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANS 392

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           +TYN LID  CK+GK++ A+++ + M   G  PN  TF+ +     K+ ++  A  +Y +
Sbjct: 393 VTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSE 452

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M      P+ VTY  ++       S    LKL  +M +N + PN  T   L+   C  G 
Sbjct: 453 MVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK 512

Query: 478 WNNAYKYIREMIE---EKC-LKPGSS--------VYEMVLQQLRRAGQLQKHEELVEKMV 525
            ++A +   E IE    +C +  G S         Y  ++  L + GQ  K  +L   M 
Sbjct: 513 ISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMR 572

Query: 526 DRGF 529
             G 
Sbjct: 573 RYGL 576



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 182/385 (47%), Gaps = 5/385 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P++Y E+I +  K+   +L    + +       +T+   ++L+   V+ G        +
Sbjct: 114 TPNVYGELIIVLCKM---ELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIY 170

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
             M   G +P  I F  +I   CR+     AQ  FD ++ K   P VIVYT L+RG C  
Sbjct: 171 EEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSD 230

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             I EAE + R M+  G+ PNVYTY+ ++D  C+     +A  ++ +ML  G  P+ +TF
Sbjct: 231 NKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTF 290

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             L+    K    +    ++  M +     +   YN LID +CK G + +A+ +   + R
Sbjct: 291 GILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER 350

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
              +P+  T++++ R +  +     A  ++ KM       N+VTYN L+         D 
Sbjct: 351 FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDK 410

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            L++  +M EN VEPNV T+  LI  YC + +   A     EM+  K L P    Y  ++
Sbjct: 411 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVI-KSLSPDVVTYTAMI 469

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFT 530
               + G +++  +L   M+D G T
Sbjct: 470 DGHCKYGSMKEALKLYSDMLDNGIT 494



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 161/357 (45%), Gaps = 24/357 (6%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVH------SPDL--YHEMINLAGKVRQFDLAWHFIDL 173
           V  GI +  +  F     AR  FV+      +P++  Y+ +I+   KV     A      
Sbjct: 288 VTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLE 347

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           ++   V   V T+SIL+R         EA + F +M + G   + + ++ +I   C++ +
Sbjct: 348 LERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGK 407

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A      + ++  EP+VI ++ L+ G+C+  N+  A  ++ EM +  + P+V TY+ 
Sbjct: 408 MDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTA 467

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID  C+ G +  A  ++++ML+ G  PN  T + L+    K  +    L+++ +     
Sbjct: 468 MIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQ 527

Query: 353 ---CEADT----------ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
              C  D           + Y  LI   C+DG+   A+K+ + M R G  P+   + ++ 
Sbjct: 528 TPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVML 587

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           R + ++  +     ++  M      PN+  + IL + +  S          K++EEN
Sbjct: 588 RGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEEN 642


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 165/312 (52%), Gaps = 2/312 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           +F  A  F D M +   +  + T++ +++ + + G    AV    +M++ G  PD + ++
Sbjct: 169 KFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYN 228

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC+ R  SEA   F  +K K   PDV  Y+ L+ G C +    EA  +F EM   
Sbjct: 229 TIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL 288

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            I P+V T++I++D LC+ G ++ A  +   M+E G EPN  T+N+LM  +   ++  + 
Sbjct: 289 NIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEA 348

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
             V++ M   GC  + ++YN LI+ +CK  ++++A ++ + M  +G  PN   +N +   
Sbjct: 349 RMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISG 408

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + + G    A  ++  M+   C P+ VT  IL+         D  L+L + M+++ ++PN
Sbjct: 409 LCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPN 468

Query: 462 VNTYRILI-TMY 472
           + TY ILI  MY
Sbjct: 469 LVTYDILIRAMY 480



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 185/371 (49%), Gaps = 4/371 (1%)

Query: 149 DLYH--EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           D++H   +IN   ++++ D A+  +  +     E    TFS L+         A A+  F
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRA 265
           + M   G  P+   ++ +I   C+  + + A      + K    PD+++Y  ++ G C+ 
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             +SEA  +F E+K  G++P+V+TYSI++  LC   Q   A  +F EM+ +   P+ +TF
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+    K     +   +   M   G E +  TYN L++ +C   K+ +A  V ++M+ 
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KGC PN  ++N++     K   ++ A  ++ +M      PNT  YN L+     +     
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             +L K+M+     P++ T  IL+   C +G+ +NA +  R M ++ CLKP    Y++++
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM-QDSCLKPNLVTYDILI 476

Query: 506 QQLRRAGQLQK 516
           + + ++G++ +
Sbjct: 477 RAMYKSGKIYR 487



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 2/349 (0%)

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           +E  V  F+IL+  + R      A     ++ + G  PD + FS +I+ LC + + + A 
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 239 SFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
            FFD +    ++P++  Y  +++G+C+ G  + A  + ++M  AG +P++  Y+ +ID L
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C+   ++ A D+F+E+   G  P+  T++ LM     + + E+   ++N+M  L    D 
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           +T+N L+D  CK+G L +A  ++  M+ KG  PN +T+N +         V  A  ++  
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M    C PN V+YNIL+  +  ++  D   +L  EM    + PN   Y  LI+  C  G 
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
              A +  ++M  + C  P      ++L  L + G L     L   M D
Sbjct: 415 HCEARELFKDMQAQGC-SPDLVTCTILLDSLCKLGYLDNALRLFRAMQD 462



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 5/309 (1%)

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
           +++ +  +  T   +I+  C +      + +L   +    RP+ V    +Y+ +I+   K
Sbjct: 181 VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIV----IYNTIIDGLCK 236

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
            R    A      +K + V   V T+SIL+     +    EA   FN M      PD + 
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           F+I++  LC++   SEAQ     + +K  EP+   Y +L+ G+C    + EA  VF  M 
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G  PNV +Y+I+I+  C+  +I  A ++F EM   G  PN+  +N L+    +A R  
Sbjct: 357 TKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHC 416

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           +  +++  M+  GC  D +T   L+D  CK G L++A+++  +M      PN  T++++ 
Sbjct: 417 EARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476

Query: 400 RCISKLGDV 408
           R + K G +
Sbjct: 477 RAMYKSGKI 485



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 136/279 (48%), Gaps = 1/279 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P ++ +  L+    R  +      + + +++  I+ +V+ ++I+I+   R  ++  A  V
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +++++G EP+++TF++L+       +  + ++ +++M   G + +  TYN +I   CK
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            GK   A+ +L  M + G  P+   +N I   + K   V+ A  ++ ++K     P+  T
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+ILM     S   +    L  EM    + P+V T+ IL+   C  G  + A   I+ MI
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            EK ++P  + Y  ++       ++ +   + + M+ +G
Sbjct: 322 -EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 36/266 (13%)

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C    I  A   F  M+     P  + F+ L+   V+      VL +  +++ L  E D 
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 358 ITYNFLIDCH-----------------------------------CKDGKLEDAIKVLNS 382
             +N LI+C                                    C + K   A++  + 
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           MV  G  PN  T+N I +   K+G    A  +  KM      P+ V YN ++      + 
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
               L +  E++   V P+V TY IL+   C       A     EM+    + P    + 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN-IMPDVVTFN 298

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
           +++ +L + G L + + +++ M+++G
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKG 324


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 189/386 (48%), Gaps = 4/386 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ +++   K R  D A  F+  M ++ V     T++ L+  Y   G   EAV  
Sbjct: 265 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 324

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
           F  M  +   PD +  S+++  LC+  +  EA+  FD++  K + PDV  Y  ++ G+  
Sbjct: 325 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 384

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +   +F  M   GI P+ YT++++I A   CG + +A  +F EM + G +P+ +T
Sbjct: 385 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 444

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    +  + +  ++ +NQM   G   D   YN LI   C  G L  A ++++ ++
Sbjct: 445 YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 504

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G + +   F+ I   + KLG V  A  ++    ++   P+ V Y++LM  +      +
Sbjct: 505 NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKME 564

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L++   M    +EPNV  Y  L+  YC +G  +      REM+ ++ +KP + +Y ++
Sbjct: 565 KALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML-QRGIKPSTILYSII 623

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L +AG+    +    +M + G  
Sbjct: 624 IDGLFQAGRTVPAKMKFHEMTESGIA 649



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 234/482 (48%), Gaps = 35/482 (7%)

Query: 55  EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRH 114
           E TL  E+ H L+ +  R+         P L  D        GF     A + +PS    
Sbjct: 53  EGTLRPEEAHDLLDELQRR-------GTPVLERDLN------GFL---AALARAPS---- 92

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHF 170
               S   R G P L V + FN   +R +   V SP    Y  +++   +  + +LA  F
Sbjct: 93  ----SAACRSG-PALAV-ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAF 146

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILC 229
              +    + + +   + L+  +  A    EA+    +R  E GC PD  ++SI++  LC
Sbjct: 147 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 206

Query: 230 RKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            + ++ +A      + +      P+V+ Y  ++ G+ + G++++A  +F+EM   GI P+
Sbjct: 207 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 266

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + TY+ V+ ALC+   + +A     +M+     PN+ T+NNL+  +    + ++ ++V+ 
Sbjct: 267 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 326

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+R     D +T + L+   CK GK+++A  V ++M  KG NP+  ++N++    +  G
Sbjct: 327 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 386

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +     ++  M      P+  T+N+L++ +A     D  + +  EM ++ V+P+V TYR
Sbjct: 387 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 446

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C +G  ++A +   +MI++  + P    Y  ++Q     G L K +EL+ ++++
Sbjct: 447 TVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 505

Query: 527 RG 528
            G
Sbjct: 506 NG 507



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 209/429 (48%), Gaps = 12/429 (2%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           HSI P  V   +      ++G  + +    F+ +  + +   +PD++   I L G   + 
Sbjct: 331 HSILPDVVTLSMLMGSLCKYG-KIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATKG 386

Query: 165 DLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
            L       DLM    +     TF++L++ Y   G+  +A+  FN M ++G  PD + + 
Sbjct: 387 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 446

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            VI+ LCR  +  +A   F+ + D+   PD   Y  L++G+C  G++ +A+ +  E+   
Sbjct: 447 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 506

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+  ++  +S +I+ LC+ G++  A ++F   + VG  P+++ ++ LM  +    + EK 
Sbjct: 507 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 566

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+V++ M   G E + + Y  L++ +CK G++++ + +   M+++G  P+   +++I   
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + + G    A   + +M +     +  TYNI+++    ++  D  + L KE+    V+ N
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686

Query: 462 VNTYRILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           + T   L TM  GM         K +   I    L P    Y +++  L + G +++ E+
Sbjct: 687 IIT---LNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAED 743

Query: 520 LVEKMVDRG 528
           +   M + G
Sbjct: 744 MFSSMQNAG 752



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 135/266 (50%), Gaps = 1/266 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   I  + +  + + +  FS ++    + G   +A + F+     G  PD + +S+++ 
Sbjct: 496 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 555

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C   +  +A   FD++     EP+V+VY  LV G+C+ G I E   +FREM   GI+P
Sbjct: 556 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 615

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +   YSI+ID L + G+   A   F EM E G   +  T+N ++R   K    ++ + ++
Sbjct: 616 STILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 675

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +++ +  + + IT N +ID   +  ++E+A  +  S+ R    PN  T++++   + K 
Sbjct: 676 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKE 735

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYN 431
           G V  A  M+  M++  CEPN+   N
Sbjct: 736 GLVEEAEDMFSSMQNAGCEPNSRLLN 761


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 2/378 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+N   K  + +    F+  ++ + V   + T++ L+  Y   GL  EA    N M   G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
            +P    ++ VI+ LC+  +   A+  F + L+    PD   Y +L+   C+ G++ E E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +VF +M+   + P++  +S ++    R G + +A   F  + E G  P+++ +  L++ +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +       + + N+M + GC  D +TYN ++   CK   L +A K+ N M  +   P++
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T  ++     KLG++  A  ++ KMK+ +   + VTYN L+  F      D   ++  +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M   E+ P   +Y IL+   C  GH   A++   EMI  K +KP   +   +++   R+G
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI-SKNIKPTVMICNSMIKGYCRSG 599

Query: 513 QLQKHEELVEKMVDRGFT 530
                E  +EKM+  GF 
Sbjct: 600 NASDGESFLEKMISEGFV 617



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 190/399 (47%), Gaps = 6/399 (1%)

Query: 135 FNWVTARPEFVHSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F  + A P    SP +Y  + +IN   K  +++ A      M    +     T+  L+  
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
             + G   E    F+ M      PD + FS ++S+  R     +A  +F+S+K+    PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
            ++YT L++G+CR G IS A  +  EM   G   +V TY+ ++  LC+   +  A  +F 
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM E    P+S T   L+  H K    +  ++++ +MK      D +TYN L+D   K G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            ++ A ++   MV K   P   +++++   +   G +  A R++ +M     +P  +  N
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589

Query: 432 ILMQMFATS-KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
            +++ +  S  ++D    L+K + E  V P+  +Y  LI  +    + + A+  +++M E
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFV-PDCISYNTLIYGFVREENMSKAFGLVKKMEE 648

Query: 491 EK-CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           E+  L P    Y  +L    R  Q+++ E ++ KM++RG
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 167/348 (47%), Gaps = 4/348 (1%)

Query: 184 DTFSILVRRYVRAGLA-AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           D  S L+R   R+G++  E V++ +      C  +   F ++I    + R+  EA   F 
Sbjct: 131 DAQSCLLRMIRRSGVSRLEIVNSLDSTFS-NCGSNDSVFDLLIRTYVQARKLREAHEAFT 189

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            L+ K F   +     L+    R G +  A  V++E+  +G+  NVYT +I+++ALC+ G
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++ +     +++ E G  P+ +T+N L+  +      E+  ++ N M   G      TYN
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I+  CK GK E A +V   M+R G +P+++T+  +     K GDV    +++  M+  
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P+ V ++ +M +F  S + D  L     ++E  + P+   Y ILI  YC  G  + A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                EM+++ C       Y  +L  L +   L + ++L  +M +R  
Sbjct: 430 MNLRNEMLQQGCAMD-VVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 169/348 (48%), Gaps = 5/348 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  M++L  +    D A  + + +K   +      ++IL++ Y R G+ + A++ 
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N M + GCA D + ++ ++  LC+++   EA   F+ + ++   PD    T L+ G C+
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GN+  A  +F++MK   I+ +V TY+ ++D   + G I  A +++A+M+     P  I+
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+          +  +V+++M     +   +  N +I  +C+ G   D    L  M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK--CEPNTVTYNILMQMFATSKS 442
            +G  P+  ++N +     +  +++ A  +  KM++ +    P+  TYN ++  F     
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
                 + ++M E  V P+ +TY  +I  +    +   A++   EM++
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 122 VRHGIPLLQVLS----FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMK 175
           + HG+   ++L      FN +T R  F   PD Y   I + G  +  +L  A      MK
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALF---PDSYTLTILIDGHCKLGNLQNAMELFQKMK 507

Query: 176 SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
            + + + V T++ L+  + + G    A   +  M      P  I++SI+++ LC K   +
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567

Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA   +D +  K  +P V++  ++++G+CR+GN S+ E    +M   G  P+  +Y+ +I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627

Query: 295 DALCRCGQITRAHDVFAEMLE--VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
               R   +++A  +  +M E   G  P+  T+N+++    + ++ ++   V  +M   G
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
              D  TY  +I+       L +A ++ + M+++G +P+
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/191 (18%), Positives = 76/191 (39%), Gaps = 18/191 (9%)

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-----------------CNPNASTFNMIF 399
           +++ + +I    + G+L DA   L  M+R+                  C  N S F+++ 
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
           R   +   +  AH  +  ++      +    N L+         ++   + +E+  + V 
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            NV T  I++   C  G       ++ + ++EK + P    Y  ++      G +++  E
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQ-VQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291

Query: 520 LVEKMVDRGFT 530
           L+  M  +GF+
Sbjct: 292 LMNAMPGKGFS 302


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 183/355 (51%), Gaps = 2/355 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M     +    TF+ L+        A+EAV   +RM   GC PD + + +V++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN 229

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A    + + + K EP V++YT ++ G C+  ++ +A  +F+EM+  GI+P
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP 289

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TYS +I  LC  G+ + A  + ++M+E    P+  TF+ L+   VK  +  +  ++Y
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M +   +   +TY+ LI+  C   +L++A ++   MV K C P+  +++ + +   K 
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKA 409

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             V+    ++ +M       NTVTY  L+Q    +   DM  ++ KEM  + V PN+ TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
             L+   C  G    A   + E ++   ++P    Y ++++ + +AG+++   +L
Sbjct: 470 NTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA+  ++ M+   +E  V  ++ ++    +     +A++ 
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNL 278

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  ME  G  P+ + +S +IS LC   R S+A     D ++ K  PDV  ++ L+  + +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE+++ EM    I P++ TYS +I+  C   ++  A  +F  M+   C P+ ++
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVS 398

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L++   KA R ++ ++++ +M + G   +T+TY  LI    + G  + A ++   MV
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  PN  T+N +   + K G +  A  ++  ++  K EP   TYNI+++    +   +
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+P+V  Y  +I+ +C  G    A    +EM E+  L P S  Y  +
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTL 577

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G  +   EL+++M   GF  
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAG 604



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 152/288 (52%), Gaps = 1/288 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + +K +  P +I ++ L+    +         +  +M+  G+  N YTYSI+I+  CR
Sbjct: 69  FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCR 128

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             Q+  A  V  +M+++G EPN +T ++L+  +  + R  + + + +QM   G + +T+T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N LI       K  +A+ +++ MV KGC P+  T+ ++   + K GD + A  +  KM+
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKME 248

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K EP  + Y  ++     +K  D  L L KEME   + PNV TY  LI+  C  G W+
Sbjct: 249 QGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +A + + +MIE K + P    +  ++    + G+L + E+L ++MV R
Sbjct: 309 DASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 165/358 (46%), Gaps = 5/358 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  +H    L +         RP  V     Y  +I+      ++  A   +  M
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVT----YSSLISCLCNYGRWSDASRLLSDM 317

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             R +   V TFS L+  +V+ G   EA   ++ M +    P  + +S +I+  C   R 
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 235 SEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA+  F+ +  K   PDV+ Y+ L++G+C+A  + E   +FREM   G+  N  TY+ +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  L + G    A ++F EM+  G  PN +T+N L+    K  + EK + V+  ++R   
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           E    TYN +I+  CK GK+ED   +  ++  KG  P+   +N +     + G    A  
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           ++ +MK+    PN+  YN L++        +   +L KEM       + +T  ++  M
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 195/426 (45%), Gaps = 9/426 (2%)

Query: 110 STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL-YHEMINLAG--KVRQFDL 166
           ST +  + +S  VR  +  +     F W   R  F       Y E ++  G  +++  D 
Sbjct: 9   STAKRFVHRSLVVRGNVATVSPSFSFFW---RRAFSGKTSYDYREKLSRNGLSELKLDDA 65

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
              F +++KSR     ++ FS L+    +       +    +M+  G   +   +SI+I+
Sbjct: 66  VALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILIN 124

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR+ +   A +    + K  +EP+++  ++L+ G+C +  ISEA  +  +M + G QP
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  T++ +I  L    + + A  +   M+  GC+P+ +T+  ++    K   T+    + 
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILL 244

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N+M++   E   + Y  +ID  CK+  ++DA+ +   M  KG  PN  T++ +  C+   
Sbjct: 245 NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G  + A R+   M + K  P+  T++ L+  F          KL  EM +  ++P++ TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI  +C     + A +    M+ + C  P    Y  +++   +A ++ +  EL  +M 
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMS 423

Query: 526 DRGFTA 531
            RG   
Sbjct: 424 QRGLVG 429



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 1/148 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K  + + A    + ++   +E T+ T++I++    +AG   +    F  + 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD +A++ +IS  CRK    EA + F  +K D   P+   Y  L+R   R G+  
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL 297
            +  + +EM+  G   +  T  +V + L
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTNML 616


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 198/385 (51%), Gaps = 4/385 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y+ +++   K  +   A   +  MKSR +    +T++ILV  Y + G   EA +
Sbjct: 240 SPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAAN 299

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
               M +    PD   ++++I+ LC + R  EA    D +++ K  PDV+ Y  L+ G  
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
               ISEA ++  EM   G++PN  T++I++   C+ G++  A +   +M E G  P+ +
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+  + KA    +  +  ++M R   + D++T N ++   C++ KLE+A K+L+S 
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            ++G   +  ++  +     K G+V+ A +++ +MK+ +  P+TVTYN ++        T
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  +    E+ E+ + P+  TY  ++  YC  G    A+++  +M+E    KP      +
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS-FKPDVFTCNI 598

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           +L+ L   G L+K  +L    V +G
Sbjct: 599 LLRGLCMEGMLEKALKLFNTWVSKG 623



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 191/384 (49%), Gaps = 4/384 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN      + + A+   D M++  +   V +++ L+   +     +EA   
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              M E G  P+ +  +I++   C++ +  +A +    +++  F PD + Y  L+ G+C+
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AGN+ EA R   EM    ++ +  T + ++  LCR  ++  A+ + +   + G   + ++
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  + K    ++ L+++++MK       T+TYN +I   C+ GK E AI  LN ++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+ +T+N I     + GDV  A + + KM +   +P+  T NIL++        +
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLE 610

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             LKL           +  TY  LIT  C  G  ++A+  + EM EEK L P    Y  +
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM-EEKELGPDHYTYNAI 669

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           +  L  +G++++ EE + KM+++G
Sbjct: 670 ITALTDSGRIREAEEFMSKMLEKG 693



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 187/422 (44%), Gaps = 29/422 (6%)

Query: 131 VLSFFNWV-TARPEFVHS------------------PDLYHEMINLAGKVRQFDLAWHFI 171
           ++SFF W  T  P F H+                   D    ++      R+ DL  H  
Sbjct: 69  LISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDL--HLS 126

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
            L  +   +  +DT    +  YV++G    A   F +M+     P+ +  + +++ L R 
Sbjct: 127 ILRLTSPSKALLDT---AIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRY 183

Query: 232 RRASEA----QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
             +       ++F D++K    P+V  +  ++ G+C      +A      M      P+ 
Sbjct: 184 PSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDN 243

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ ++DALC+ G++  A D+  +M   G  PN  T+N L+  + K    ++   V   
Sbjct: 244 VTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M +     D  TYN LI+  C +G++E+A K+ + M      P+  ++N +     +   
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A ++  +M +   +PN VT+NI+++ +      D       +MEE+   P+  TY  
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI  YC  G+   A++ + EM   K +K  S     +L+ L R  +L++  +L+     R
Sbjct: 424 LINGYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482

Query: 528 GF 529
           G+
Sbjct: 483 GY 484



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 143/284 (50%), Gaps = 4/284 (1%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR---CGQITRA 306
           P   +    +  + ++G    A ++F++MK   ++PN+ T + ++++L R      ++ +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            + F + +++G  PN  TFN ++  +   ++ +  ++  N M +  C  D +TYN ++D 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK G+L DA  +L  M  +G  PN +T+N++     K+G +  A  +   M      P+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TYN+L+         +   KL+ EME  ++ P+V +Y  LI         + A+K + 
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           EM  EK +KP +  + ++++   + G++      + KM + GF+
Sbjct: 373 EM-SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 116/255 (45%), Gaps = 24/255 (9%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A    D MK + +  +  T++ ++    + G   +A+   N + E G  PD+  ++ +
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 225 ISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +   CR+    +A  F + + ++ F+PDV     L+RG C  G + +A ++F      G 
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGK 624

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
             +  TY+ +I +LC+ G++  A ++ +EM E    P+  T+N ++     + R  +  +
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684

Query: 344 VYNQMKRLGC-----------------------EADTITYNFLIDCHCKDGKLEDAIKVL 380
             ++M   G                        ++ ++ Y+  I   C +GK +DA+++ 
Sbjct: 685 FMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744

Query: 381 NSMVRKGCNPNASTF 395
               +KG   + ST+
Sbjct: 745 GESKQKGITVDKSTY 759



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 26/208 (12%)

Query: 157 LAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L G  R+ D+  A+ F + M   + +  V T +IL+R     G+  +A+  FN     G 
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGK 624

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAER 273
           A D + ++ +I+ LC++ R  +A +    +++K   PD   Y  ++     +G I EAE 
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684

Query: 274 VFREMKMAGIQPN-----------------------VYTYSIVIDALCRCGQITRAHDVF 310
              +M   G  P                           YS  I  LC  G+   A  +F
Sbjct: 685 FMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRT 338
            E  + G   +  T+ NLM   +K  ++
Sbjct: 745 GESKQKGITVDKSTYINLMDGLIKRRKS 772


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 168/341 (49%), Gaps = 2/341 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T + LV+    AG   E +    +M+E G  P   A++ ++ + CR+++A EA+   + +
Sbjct: 232 THAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEM 291

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            D    P V+  T +V  +CR G +S A RVF  M+  G +PNV+TY+ ++   C  G++
Sbjct: 292 FDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKV 351

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  +  +M E G EP+ +T+N L+R            ++   M+  G  AD  TYN L
Sbjct: 352 YKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVL 411

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK GK+++A  + + +  +G  PN+ TFN +   + K G  + A      M     
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGY 471

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+T TY+  ++    +K +   L    EM + +V+P+   Y I+I       ++  A +
Sbjct: 472 APDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATR 531

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
              +M+ + C  P    Y   ++     G+L + E +V +M
Sbjct: 532 IWGQMVSQGC-SPDVVTYTTSVRAYCNEGRLDEAENVVTEM 571



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 168/350 (48%), Gaps = 6/350 (1%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           T  T++ L+R   R      A    + M   G  PD   F+ +I   CR ++   A   F
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLF 187

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             +  + F  D + Y  L+ G+C AG I EA  +FREM     QP++YT++ ++  LC  
Sbjct: 188 CKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDA 243

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+      +  +M E+G  P +  +  L+ +  +  + E+  ++ N+M   G     +T 
Sbjct: 244 GRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTC 303

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             +++ +C++G++  A++V  SM  KGC PN  T+N I +     G V  A  +  +M++
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRE 363

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              EP+ VTYN+L++            +L + ME N +  +  TY +LI   C  G  + 
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           A   + + +E + ++P S  +  V+  L +AG+       +E M+  G+ 
Sbjct: 424 ACS-LFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYA 472



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 172/365 (47%), Gaps = 8/365 (2%)

Query: 125 GIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           G+ +LQ +    W   RP    +   Y  +++L  + ++ + A   ++ M    +   V 
Sbjct: 249 GLCMLQKMKELGW---RP----TTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T +I+V  Y R G  + AV  F  M   GC P+   ++ ++   C   +  +A +  D +
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           ++   EPDV+ Y  L+RG C  G+I  A R+ R M+  G+  + YTY+++IDALC+ G++
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  +   G  PNS+TFN ++    KA + +        M   G   DT TY+  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPF 481

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK    ++ +  ++ M++K   P+   + ++   +    +   A R++G+M    C
Sbjct: 482 IENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGC 541

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ VTY   ++ +      D    +  EM++     +   Y  LI  +  +G  + A  
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVT 601

Query: 484 YIREM 488
            ++ M
Sbjct: 602 ILKHM 606



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 187/447 (41%), Gaps = 25/447 (5%)

Query: 94  LSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFV-------- 145
           L +    +   H++SP  +R   ++        P   +L+ F+     P  +        
Sbjct: 70  LDISLPVVLRLHALSPPPLRPFFDR--------PFRSLLTHFSRYALTPLMLRLFAHMYR 121

Query: 146 HSPD-----LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           H+P       Y+ +I    +      A  ++ LM          TF+ L+  Y R     
Sbjct: 122 HAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLE 181

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVR 260
            A   F +M   G + D ++++ +I   C   R  EA   F   ++  +PD+  +  LV+
Sbjct: 182 VAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELF---REMTQPDMYTHAALVK 238

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C AG   E   + ++MK  G +P    Y+ ++D  CR  +   A  +  EM + G  P
Sbjct: 239 GLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMP 298

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
             +T   ++  + +  R    ++V+  M+  GCE +  TYN ++   C  GK+  A+ +L
Sbjct: 299 CVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALL 358

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M   G  P+  T+N++ R     G +  A R+   M+      +  TYN+L+     +
Sbjct: 359 DQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKT 418

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D    L   +E   + PN  T+  +I   C  G ++ A  ++  MI      P +  
Sbjct: 419 GKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAG-YAPDTYT 477

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDR 527
           Y   ++ L +    Q+    +++M+ +
Sbjct: 478 YSPFIENLCKTKGSQEGLFFIDEMLQK 504



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 175/422 (41%), Gaps = 70/422 (16%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AGKV +   A   +D M+   VE  V T+++L+R     G    A      ME  G A D
Sbjct: 348 AGKVYK---AMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAAD 404

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
           +  ++++I  LC+  +  EA S FD L+ +   P+ + +  ++ G C+AG    A     
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLE 464

Query: 277 EMKMAGIQPNVYTYSIVIDALCRC------------------------------------ 300
            M  AG  P+ YTYS  I+ LC+                                     
Sbjct: 465 NMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNER 524

Query: 301 --GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
             G  TR   ++ +M+  GC P+ +T+   +R +    R ++   V  +MK+     D +
Sbjct: 525 NYGLATR---IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAM 581

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM--------------------I 398
            YN LID H   G+ + A+ +L  M      PN  TF +                    +
Sbjct: 582 AYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSV 641

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
           ++ I +L DV     ++  MK      +  TY  +++ F+  +  D V  L   M+E  +
Sbjct: 642 WKTI-ELADV---FELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENL 697

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
             N + Y  L+  +C +  +++A+  +  MI    L P    Y+ +L  L   GQ  + +
Sbjct: 698 PLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFL-PNLIFYQYLLSGLTAEGQADRAK 756

Query: 519 EL 520
           E+
Sbjct: 757 EI 758



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 155/382 (40%), Gaps = 32/382 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K  +FD+A  F++ M S        T+S  +    +   + E +   + M 
Sbjct: 443 FNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEML 502

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    P  + ++IVI+ L  +R    A   +  +  +   PDV+ YT  VR +C  G + 
Sbjct: 503 QKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLD 562

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF---- 325
           EAE V  EMK      +   Y+ +ID     GQ  RA  +   M  V   PN  TF    
Sbjct: 563 EAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILL 622

Query: 326 ------NNLMRVHVKASRTEK------VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
                      V +KA+   K      V +++  MK+    +   TY  +++   ++ +L
Sbjct: 623 RHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRL 682

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE-------PN 426
           ++   +++ M  +    N   +N +  C  KL       RMY     L C        PN
Sbjct: 683 DEVTSLVSLMKEENLPLNEDIYNALVNCFCKL-------RMYSDAWALLCSMIGHGFLPN 735

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            + Y  L+         D   ++ +     E   +   ++++I  +   GH +  +  I 
Sbjct: 736 LIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMIS 795

Query: 487 EMIEEKCLKPGSSVYEMVLQQL 508
            + + KC KP    Y M+ ++L
Sbjct: 796 MLEQMKC-KPSDETYAMLTEEL 816


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 186/386 (48%), Gaps = 4/386 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  +++   K R  D A  F+  M ++ V     T++ L+  Y   G   EAV  
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
           F  M      PD +A + ++  LC+  +  EA+  FD++  K + PDV  YT ++ G+  
Sbjct: 314 FKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYAT 373

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +   +F  M   GI P++YT++++I A   CG + +A  +F EM + G +P+ +T
Sbjct: 374 KGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT 433

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    +  + +  ++ +NQM   G   D   Y+ LI   C  G L  A ++++ ++
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM 493

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G   +   F  I   + KLG V  A  ++    ++   P+ V YN+LM  +      +
Sbjct: 494 NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKME 553

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L++   M    +EPNV  Y  L+  YC +G  +      REM+ +K +KP + +Y ++
Sbjct: 554 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML-QKGIKPSTILYNII 612

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L  AG+    +    +M + G  
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIA 638



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 234/482 (48%), Gaps = 35/482 (7%)

Query: 55  EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRH 114
           E TL  E+ H L+ +  R+         P L+ D        GF     A + +PS+   
Sbjct: 42  EGTLRPEEAHDLLDELQRR-------GTPVLDRDLN------GFL---AALARAPSSA-- 83

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHF 170
               +CG     P L V + FN   +R +   V SP    Y  +++   +  + +LA  F
Sbjct: 84  ----ACGSG---PALAV-ALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAF 135

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILC 229
              +    + +     S L++ +  A    EA+    +R  E GC PD  +++I++  LC
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLC 195

Query: 230 RKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            + ++ +A      + +      PDV+ Y  ++ G+ + G++++A  +F+EM   GI P+
Sbjct: 196 NQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 255

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + TYS V+ ALC+   + +A     +M+  G  P++ T+NNL+  +    + ++ ++V+ 
Sbjct: 256 LVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 315

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+R     D +  N L+   CK GK+++A  V ++M  KG NP+  ++ ++    +  G
Sbjct: 316 EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKG 375

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +     ++  M      P+  T+N+L++ +A     D  + +  EM ++ V+P+V TY 
Sbjct: 376 CLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C +G  ++A +   +MI++  + P    Y  ++Q     G L K +EL+ ++++
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVV-PDKYAYHCLIQGFCTHGSLLKAKELISEIMN 494

Query: 527 RG 528
            G
Sbjct: 495 NG 496



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 194/388 (50%), Gaps = 8/388 (2%)

Query: 146 HSPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            +PD++   I L G   +  L       DLM    +   + TF++L++ Y   G+  +A+
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             FN M ++G  P  + +  VI+ LCR  +  +A   F+ + D+   PD   Y  L++G+
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G++ +A+ +  E+   G++ ++  +  +I+ LC+ G++  A ++F   + VG  P++
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + +N LM  +    + EK L+V++ M   G E + + Y  L++ +CK G++++ + +   
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++KG  P+   +N+I   + + G    A   + +M +     N  TY+I+++    ++ 
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSV 500
            D  + L KE+    V+ ++ T   L TM  GM         K +   I    L P +  
Sbjct: 657 FDEAIFLFKELRAMNVKIDIIT---LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y +++  L + G +++ E++   M + G
Sbjct: 714 YSIMITNLLKEGLVEEAEDMFSSMQNAG 741



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 1/266 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   I  + +  + + +  F  ++    + G   +A + F+     G  PD + +++++ 
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C   +  +A   FD++     EP+V+ Y  LV G+C+ G I E   +FREM   GI+P
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +   Y+I+ID L   G+   A   F EM E G   N  T++ ++R   K    ++ + ++
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 664

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +++ +  + D IT N +I    +  ++E+A  +  S+ R G  P A T++++   + K 
Sbjct: 665 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKE 724

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYN 431
           G V  A  M+  M++  CEP++   N
Sbjct: 725 GLVEEAEDMFSSMQNAGCEPDSRLLN 750


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 187/378 (49%), Gaps = 5/378 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E++ L  +    D        M    V + + TF++++  Y + G   EA     +M 
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           + G +PD    +  I   CR +    A   F+ + ++ E   + Y  L+ G C AG I E
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNE---VSYNQLIHGLCEAGRIDE 276

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A  +F  MK     PNVYTY+ +I  LCR   + +A  +  EMLE    P+ IT+N+L+ 
Sbjct: 277 AVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIA 335

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              +A   +   ++ + MK  G   D  TY   ID  CK  ++E+A ++ +S+  +G + 
Sbjct: 336 GQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSA 395

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N   ++++     K+G V+ A  ++ KM    C PN  T+N L+    ++ +    L L 
Sbjct: 396 NVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLF 455

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            +M +  ++P V T+ ILI      G +++A+K +++M+     KP +  Y   ++    
Sbjct: 456 DQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSG-EKPVARTYNAFIEVYCS 514

Query: 511 AGQLQKHEELVEKMVDRG 528
           AG++Q+ E+++ +M + G
Sbjct: 515 AGKVQEAEDMMVQMKEEG 532



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 182/365 (49%), Gaps = 9/365 (2%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD +     + G  R  D+  A+   + M +RN E++   ++ L+     AG   EAV 
Sbjct: 224 SPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN-EVS---YNQLIHGLCEAGRIDEAVS 279

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F RM++  C P+   ++ +I  LCRK    +A    D + ++   PD+I Y +L+ G C
Sbjct: 280 LFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQC 338

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RAG++  A R+   MK  G+ P+  TY   ID LC+  ++  A  +F  + E G   N I
Sbjct: 339 RAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVI 398

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            ++ L+  + K  + ++   ++ +M    C  +  T+N LI   C  G L++A+ + + M
Sbjct: 399 MYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM 458

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V+ G  P   TFN++   + K GD + AH+   KM     +P   TYN  ++++ ++   
Sbjct: 459 VKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKV 518

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
                +  +M+E  V P+  TY  LI  Y  +G   +A+  ++ M +  C +P    +  
Sbjct: 519 QEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADC-EPSHHTFLS 577

Query: 504 VLQQL 508
           +++QL
Sbjct: 578 LIKQL 582



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 167/374 (44%), Gaps = 32/374 (8%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ +I    +    D A+  + LMK R +     T+   +    ++    EA   
Sbjct: 325 PDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRL 384

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F+ + E G + + I +S++I   C+  +  EA   F+ +  K   P+   +  L+ G C 
Sbjct: 385 FDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCS 444

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AGN+ EA  +F +M   G++P VYT++I+I  + + G    AH    +M+  G +P + T
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N  + V+  A + ++   +  QMK  G   D  TY  LI  + K G    A  VL SM 
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564

Query: 385 RKGCNPNASTFNMIFR------------------CISKLGDVNGAH-----------RMY 415
              C P+  TF  + +                   +S  GDV G++            ++
Sbjct: 565 DADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELF 624

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +M+   C P++  Y  L+      ++  + LKL  +M++  + P+   +  +I+  C +
Sbjct: 625 EEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKL 684

Query: 476 GHWNNAYKYIREMI 489
             +  A   + +MI
Sbjct: 685 QKYGEAANIVEDMI 698



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 145/341 (42%), Gaps = 33/341 (9%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG +++   A    D M    ++ TV TF+IL+ R ++ G   +A     +M   G  P 
Sbjct: 445 AGNLKE---ALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPV 501

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
              ++  I + C   +  EA+     +K++   PD   YT+L++ + + G    A  V +
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561

Query: 277 EMKMAGIQPNVYTYSIVI------------------DALCRCGQITRAH----------- 307
            M  A  +P+ +T+  +I                  +++   G +  ++           
Sbjct: 562 SMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVI 621

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           ++F EM + GC P+S  +  L+    K       L++ +QM++ G     + +N +I C 
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK  K  +A  ++  M+  G +P       +   + + G+    + ++ K++      + 
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + + IL+         +   +L +EME+N    +  TY IL
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 3/154 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD   Y ++I+   KV    +A   +D M+   +  +   F+ ++    +     EA +
Sbjct: 633 TPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAAN 692

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
               M   G +P       +I  L  +       S F  L+   +  D I +  L+ G  
Sbjct: 693 IVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGML 752

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           + G + E  ++F EM+  G   +  TYSI+   L
Sbjct: 753 KQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 181/362 (50%), Gaps = 2/362 (0%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            ++   F + M+       V T++ ++  Y +     EA      M   G  P+ + +++
Sbjct: 219 LEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNM 278

Query: 224 VISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           VI+ LCR  R  E       +  K F PD + Y  LV G+C+ GN  +A  +  EM   G
Sbjct: 279 VINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           + P+V TY+ +I+ +C+ G + RA + F +M   G  PN +T+ +L+    +    ++  
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +++++M R G     +TYN L++ HC  G++E+AI +L  M  KG +P+  +++ I    
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            +  +++ A +M  +M +    P+ +TY+ L+Q     +  +    L +EM    + P+ 
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDE 518

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  LI  YC  G  N A     EMI++  L P +  Y +++  L +  + ++ + L+ 
Sbjct: 519 FTYTSLINGYCKEGDLNEALNLHDEMIKKGFL-PDTVTYNVLINGLNKQARTREAKRLLL 577

Query: 523 KM 524
           K+
Sbjct: 578 KL 579



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 231/499 (46%), Gaps = 27/499 (5%)

Query: 53  SPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPS-----LSLGFSQISTAHSI 107
           SP + L++EK  +L+K +     + SS   P L     + +     L+L F   +  H  
Sbjct: 17  SPTDALLAEKALTLLKRYPYHLNSISSQITPELASYLLLQTQNDRTLTLKFINFAKPHQF 76

Query: 108 ----SPSTVRHVIEKSCGVRHGIPLLQVLS----------FFNWVTARPEFVHSPDLYHE 153
                     H++ K    +    L Q L+          FF  +       +S     +
Sbjct: 77  FNPHCKCIALHILTKFKLYKTAQNLAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFD 136

Query: 154 MINLAGKVRQF-DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG---LAAEAVHAFNRM 209
           ++  +     F + A + +DL K       V +++ ++   VR     + AE V  +  M
Sbjct: 137 LVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKV--YREM 194

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
              G + +  +++I+I   C          FF+ + +++  P+V+ Y  ++  +C+   I
Sbjct: 195 IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRI 254

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA ++ R M + G++PN+ TY++VI+ LCR G+I     V AEM   G  P+ +T+N L
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  + K     + L ++++M R G   D +TY  LI+  CK G L  A++  + M  +G 
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL 374

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN  T+  +    S+ G ++ A+R++ +M      P  VTYN L+     S   +  + 
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L + ME   + P+V +Y  +I  +C     + A++   EM+ EK + P +  Y  ++Q L
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV-EKGVSPDAITYSSLIQGL 493

Query: 509 RRAGQLQKHEELVEKMVDR 527
               +L +  +L ++M+++
Sbjct: 494 CEQRRLNEACDLFQEMLNK 512



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 188/390 (48%), Gaps = 22/390 (5%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  F      Y+ ++N   KV  F  A      M    +   V T++ L+    +AG   
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
            A+  F++M   G  P+ + ++ +I+   +K    EA   +D + +  F P ++ Y  L+
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C +G + EA  + R M+  G+ P+V +YS +I   CR  ++ RA  + AEM+E G  
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P++IT+++L++   +  R  +   ++ +M       D  TY  LI+ +CK+G L +A+ +
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + M++KG  P+  T+N++   ++K      A R+  K+   +  PN +TY+ L++    
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE---- 596

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
              +D+  K               +   LI  +C  G  N A +    MI+    KP  +
Sbjct: 597 -SCSDIEFK---------------SVVALIKGFCMKGLMNEADQVFESMIKRN-QKPNEA 639

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           VY +++    R G + K  +L ++MVD GF
Sbjct: 640 VYNVIIHGHCRDGNVHKAHKLYKEMVDFGF 669



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 5/294 (1%)

Query: 240 FFDSLKDKF---EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           FF  LKD +        V+  +V+       I +A  +    K+ G  P V +Y+ ++D+
Sbjct: 117 FFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDS 176

Query: 297 LCRCGQ-ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           + RC + +  A  V+ EM+  G   N  ++N L+R    A   E  L+ + +M+R  C  
Sbjct: 177 IVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLP 236

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           + +TYN +I  +CK  ++++A K+L SM  +G  PN  T+NM+   + ++G +     + 
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVL 296

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +M      P+ VTYN L+  +    +    L L  EM  N + P+V TY  LI   C  
Sbjct: 297 AEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKA 356

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G+ N A ++  +M   + L+P    Y  ++    + G + +   + ++M+  GF
Sbjct: 357 GNLNRAMEFFDQM-HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGF 409



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 178/365 (48%), Gaps = 16/365 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   +    D A+   D M       T+ T++ L+  +  +G   EA+     ME
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME 440

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +PD +++S +I+  CR +    A Q   + ++    PD I Y++L++G C    ++
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLN 500

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +F+EM    + P+ +TY+ +I+  C+ G +  A ++  EM++ G  P+++T+N L+
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC---------------HCKDGKLE 374
               K +RT +  ++  ++       + ITY+ LI+                 C  G + 
Sbjct: 561 NGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMN 620

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +A +V  SM+++   PN + +N+I     + G+V+ AH++Y +M D    P+TVT   L+
Sbjct: 621 EADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALV 680

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           +   +    + +  + +++  +    +    + L+ +    G+ +  +  + EM ++  L
Sbjct: 681 KALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFL 740

Query: 495 KPGSS 499
             G++
Sbjct: 741 PSGAA 745



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 125/266 (46%), Gaps = 18/266 (6%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y  +I    + R+ + A      M ++++     T++ L+  Y + G   EA++
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALN 539

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV---- 259
             + M + G  PD + ++++I+ L ++ R  EA+     L  D+  P+ I Y  L+    
Sbjct: 540 LHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCS 599

Query: 260 -----------RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
                      +G+C  G ++EA++VF  M     +PN   Y+++I   CR G + +AH 
Sbjct: 600 DIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHK 659

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           ++ EM++ G  P+++T   L++        E++  V   + R    +D      L+  + 
Sbjct: 660 LYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINH 719

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNAST 394
           K+G ++    +L  M + G  P+ + 
Sbjct: 720 KEGNIDAVFNLLTEMAKDGFLPSGAA 745


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 183/365 (50%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M     +    TF+ L+        A+EAV   ++M + GC PD + +  V++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A S    + K K E DV++Y  ++ G C+  ++ +A  +F EM   GI+P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V+TYS +I  LC  G+ + A  + ++M+E    PN +TF+ L+   VK  +  +  ++Y
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M +   + D  TY+ LI+  C   +L++A  +   M+ K C PN  T++ + +   K 
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             V     ++ +M       NTVTY  L+  F  ++  D    + K+M    V PN+ TY
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            IL+   C  G    A   + E ++   ++P    Y ++++ + +AG+++   EL   + 
Sbjct: 472 NILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530

Query: 526 DRGFT 530
            +G +
Sbjct: 531 LKGVS 535



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 192/387 (49%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  ++N   K    DLA   +  M+   +E  V  ++ ++    +     +A++ 
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  M+  G  PD   +S +IS LC   R S+A     D ++ K  P+V+ ++ L+  + +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE+++ EM    I P+++TYS +I+  C   ++  A  +F  M+   C PN +T
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L++   KA R E+ ++++ +M + G   +T+TY  LI    +    ++A  V   MV
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G +PN  T+N++   + K G +  A  ++  ++    EP+  TYNI+++    +   +
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              +L   +    V PNV  Y  +I+ +C  G    A   +++M E+  L P S  Y  +
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTL 579

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G  +   EL+++M   GF  
Sbjct: 580 IRARLRDGDREASAELIKEMRSCGFAG 606



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 194/407 (47%), Gaps = 8/407 (1%)

Query: 131 VLSFFNWVTA---RPEFVHSPDLYHEMIN--LAGKVRQFDLAWHFIDLMKSRNVEITVDT 185
           V SFFN   +      F  +   Y E++   L+  ++  D    F D++KSR     V+ 
Sbjct: 27  VPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE- 85

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           F+ L+    +       +    +M+  G + D   +SI I+  CR+ + S A +    + 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K  +EPD++  ++L+ G+C +  IS+A  +  +M   G +P+ +T++ +I  L    + +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +  +M++ GC+P+ +T+  ++    K    +  L +  +M++   EAD + YN +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  CK   ++DA+ +   M  KG  P+  T++ +  C+   G  + A R+   M + K  
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN VT++ L+  F          KL  EM +  ++P++ TY  LI  +C     + A   
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
              MI + C  P    Y  +++   +A ++++  EL  +M  RG   
Sbjct: 386 FELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 7/359 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  +H    L + +  +    RP+       Y  +I+      ++  A   +  M
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT----YSSLISCLCNYGRWSDASRLLSDM 319

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             R +   V TFS L+  +V+ G   EA   ++ M +    PD   +S +I+  C   R 
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379

Query: 235 SEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            EA+  F+ +  KD F P+V+ Y+ L++G+C+A  + E   +FREM   G+  N  TY+ 
Sbjct: 380 DEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I    +      A  VF +M+ VG  PN +T+N L+    K  +  K + V+  ++R  
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            E D  TYN +I+  CK GK+ED  ++  ++  KG +PN   +N +     + G    A 
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            +  KMK+    PN+ TYN L++        +   +L KEM       + +T  ++  M
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 4/156 (2%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFI--DLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           VH P++    I L G  +   LA   +  + ++   +E  + T++I++    +AG   + 
Sbjct: 464 VH-PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRG 261
              F  +   G +P+ IA++ +IS  CRK    EA S    +K D   P+   Y  L+R 
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             R G+   +  + +EM+  G   +  T  +V + L
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 182/363 (50%), Gaps = 5/363 (1%)

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           W F   +        V  ++IL+ ++ + G   +A   FN + + G  P  ++F+ +I+ 
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 228 LCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           LC+ R   E      ++++ +  PDV  Y+ L+ G C+ G +  AE++F EM+  G++PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
             T++ +ID   R  ++  A + + +ML +G +P+ + +N L+    K     K  ++ +
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +MK +G + D ITY  LID +CK+G LE A+++   M  +G   +   F  +     + G
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V  A R   +M +   +P+  TY +++  +    +  M  KL KEM+ N  +P V TY 
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +L+   C  G   NA   +  M+    + P    Y ++L+   + G   K E+L++   +
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLG-VTPDDITYNILLEGHCKNG---KAEDLLKLRNE 563

Query: 527 RGF 529
           +G 
Sbjct: 564 KGL 566



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 198/448 (44%), Gaps = 54/448 (12%)

Query: 136 NWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN--------VEITVDT-- 185
           NW+++ P F H+   Y  M N     + F      I  + SR             +DT  
Sbjct: 89  NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148

Query: 186 -------FSILVRRYVRAGLAAEAVHAF-------------------------------- 206
                  F  L+  Y  +G  ++A+  F                                
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208

Query: 207 ---NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
              + + EYG  P    ++I+I+  C++    +A+  F+ ++ +   P  + +  L+ G 
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C++ N+ E  R+ + M+   I P+V+TYS++I  LC+ G++  A  +F EM + G  PN 
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           ITF  L+    ++ R +  +  Y+QM  +G + D + YN L++  CK G +  A K+++ 
Sbjct: 329 ITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   G  P+  T+  +     K GD+  A  +   M +     + V +  L+  F     
Sbjct: 389 MKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                +  +EM E  ++P+  TY ++I  YC  G+    +K ++EM +    KPG   Y 
Sbjct: 449 VRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM-QINGHKPGVITYN 507

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +++  L + GQ++    L+E M++ G T
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVT 535



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 151/303 (49%), Gaps = 1/303 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K R  D  +     M+   +   V T+S+L+    + G    A   F+ M+
Sbjct: 261 FNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ 320

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ I F+ +I    R RR   A  ++   L    +PD+++Y  L+ G C+ G+++
Sbjct: 321 QRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++  EMKM G++P+  TY+ +ID  C+ G +  A ++   M E G   +++ F  L+
Sbjct: 381 KARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALI 440

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  R     +   +M   G + D  TY  +ID +CK G ++   K+L  M   G  
Sbjct: 441 SGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHK 500

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+N++   + K G +  A+ +   M +L   P+ +TYNIL++    +   + +LKL
Sbjct: 501 PGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560

Query: 450 KKE 452
           + E
Sbjct: 561 RNE 563



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 112/203 (55%), Gaps = 3/203 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ ++N   KV   + A   +D MK   ++    T++ L+  Y + G    A+  
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCR 264
              M E G   D +AF+ +IS  CR  R  +A+ +  + ++   +PD   YT ++ G+C+
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GN+    ++ +EM++ G +P V TY+++++ LC+ GQ+  A+ +   ML +G  P+ IT
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 325 FNNLMRVHVKASRTEKVLQVYNQ 347
           +N L+  H K  + E +L++ N+
Sbjct: 541 YNILLEGHCKNGKAEDLLKLRNE 563


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 186/408 (45%), Gaps = 40/408 (9%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A    D M     +  V T+  L+    + G  + A+     ME+  C P  
Sbjct: 138 GKIGE---ALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTV 194

Query: 219 IAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + +S +I  LC+ R+ +EA S F D L     P+   Y++L+ G C  G+  EA R+F  
Sbjct: 195 VVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYA 254

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    I P+  T++ ++DALC+ G + +AH V   M++   +P+ +T+N+LM  H   S 
Sbjct: 255 MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSE 314

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             K + V++ M R GC    I+Y  LI+ +CK   ++ A+ +   M ++G  P+  T+N 
Sbjct: 315 MGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNT 374

Query: 398 IFRCISKLGDVNGA----HRM--YGKMKDL-----------------------------K 422
           +   +  +G +  A    H M  YG++ DL                              
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            +P+   Y+I+M     +   +    L  ++    + P+V TY I+I   C  G    A 
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEAS 494

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           K   EM E  C  P +  Y ++ +   R  +  +  +L ++M+ RGF+
Sbjct: 495 KLFGEMDENGC-SPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFS 541



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 155/344 (45%), Gaps = 2/344 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSL 244
           FS L+    R    +  +  + +M+ +G   +    +I+I+  C   R   A S   D L
Sbjct: 57  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 116

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K  ++P    +T L+RG C  G I EA ++F +M   G QP+V TY  +I+ LC+ G  +
Sbjct: 117 KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTS 176

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A      M +  C P  + ++ ++    K  +  + L +++ M   G   +  TY+ LI
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 236

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
              C  G  ++AI++  +M+ +   P+  TFN +   + K G V  AH +   M     +
Sbjct: 237 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLK 296

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+ VTYN LM            + +   M      P+V +Y  LI  YC +   + A   
Sbjct: 297 PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGL 356

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             EM  ++ L P +  Y  ++  L   G+L+    L  +MV  G
Sbjct: 357 FEEM-SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 146/288 (50%), Gaps = 1/288 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ LV    + G+  +A +  + M +    PD + ++ ++   C +    +  + FD++
Sbjct: 266 TFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM 325

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K   P VI YT L+ G+C+   + +A  +F EM   G+ P+  TY+ +I  LC  G++
Sbjct: 326 VRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F EM+  G  P+ +T+  L     K  R  + + +   ++    + D   Y+ +
Sbjct: 386 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 445

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D  C+ G+LE A  + + +  KG +P+  T+ ++   + + G +  A +++G+M +  C
Sbjct: 446 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC 505

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            PN  TYN++ + F  +  T   ++L +EM       +V+T  +L+ M
Sbjct: 506 SPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEM 553



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 1/259 (0%)

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            I +A  +F  M      P++  +S ++ ++ R    +    ++ +M   G   N+ T N
Sbjct: 34  TIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN 93

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+      +R      V   + +LG +  T T+  LI   C +GK+ +A+++ + M  +
Sbjct: 94  ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  P+  T+  +   + K+G+ + A R    M+   C P  V Y+ ++      +     
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L L  +M    + PN  TY  LI   C +GHW  A +    MI  K + P    +  ++ 
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM-PDQLTFNTLVD 272

Query: 507 QLRRAGQLQKHEELVEKMV 525
            L + G + K   +V+ M+
Sbjct: 273 ALCKEGMVVKAHYVVDVMI 291



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A  ++ +M  ++  P+ V ++ L+      K    VL L K+M+   +  N  T  I
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI  +C +     A+  + ++++    +P ++ +  +++ L   G++ +  +L +KM   
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153

Query: 528 GF 529
           GF
Sbjct: 154 GF 155


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 206/426 (48%), Gaps = 8/426 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
           S S+   +I+     +H   ++ V S    V+  P F     L    +N     ++   A
Sbjct: 58  SYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVN----TQKPSFA 113

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           +  + L+  R   + V  F++L++ + ++G + +A+  F  M+     PD ++++ VI+ 
Sbjct: 114 FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173

Query: 228 LCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           LC+ +R  EA+  F  +K  + +P+ + ++ L+ G+C+ G++ E   +  EM+  G++ +
Sbjct: 174 LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           V+ YS +I   C  G I R  ++F EML     PN +T++ LM    K  + ++  Q+ +
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
            M       D + Y  L D   K+G+  DAIKVL+ MV++G  PN  T+N I   + K G
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE--VEPNVNT 464
            V+ A  +   M     +P+ VTY+ L++        D  + L   +   E  ++P+V  
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFA 413

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           + ++I   C      +A +    M+ E+        Y +++     AG+L K  EL +  
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMV-ERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472

Query: 525 VDRGFT 530
           VD G +
Sbjct: 473 VDSGIS 478



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 168/358 (46%), Gaps = 4/358 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  +NV   V T+S L+    +     EA    + M      PD +A++++   L +  R
Sbjct: 260 MLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGR 319

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           AS+A    D + K   EP+ + Y  ++ G C+ G + +A  +   M   G +P+V TYS 
Sbjct: 320 ASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYST 379

Query: 293 VIDALCRCGQITRAHDVFAEML--EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           ++  LC  G+I  A D+   ++  E   +P+   FN +++   K  R     +VY  M  
Sbjct: 380 LVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVE 439

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G  ++ +TYN LID +   GKL  A+++    V  G +PNA+T+ ++   + K+  ++ 
Sbjct: 440 RGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSI 499

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  ++ K +     P    YN LM       S +    L +EM     +P+V ++ I+I 
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIID 559

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                G   +A K +   +    L P +  + +++ +  + GQL +   L E+MV  G
Sbjct: 560 GTLKAGDVESA-KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 168/328 (51%), Gaps = 3/328 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM- 209
           Y+ +IN   K  + D A   ++ M  +  +  V T+S LV+     G   EAV   N + 
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLM 401

Query: 210 -EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
            +E+   PD  AF++VI  LC++RR   A+  + ++ ++ F  +++ Y  L+ G+  AG 
Sbjct: 402 SKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGK 461

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +++A  ++++   +GI PN  TY+++I+ LC+   ++ A  +F +    G  P    +N 
Sbjct: 462 LTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNT 521

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           LM    + S  E+   ++ +M+    + D +++N +ID   K G +E A ++L  M+   
Sbjct: 522 LMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMN 581

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  TF+++     KLG ++ A  +Y +M      P+ V ++ L++ ++    T+ V+
Sbjct: 582 LVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVV 641

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGM 475
            + ++M + +V  +      ++   C M
Sbjct: 642 SMLQQMADKDVVLDSKLTSTILACLCNM 669



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 1/290 (0%)

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +K  F  +V  +  L++G+C++G+  +A  +F  MK   + P+  +Y+ VI+ LC+  ++
Sbjct: 121 MKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRL 180

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A ++F EM    C+PNS+TF+ L+    K    E+   +  +M+++G E D   Y+ L
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL 240

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C  G +E   ++ N M+RK   PN  T++ +   + K      A +M   M   K 
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKV 300

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ V Y +L    + +      +K+   M +   EPN  TY  +I   C  G  ++A  
Sbjct: 301 RPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALG 360

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            I E + +K  KP    Y  +++ L   G++ +  +L+  ++ + F  +P
Sbjct: 361 -ILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKP 409



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 163/379 (43%), Gaps = 38/379 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K +++  A   +D M    V   V  +++L     + G A++A+   + M 
Sbjct: 272 YSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMV 331

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNIS 269
           + G  P+ + ++ +I+ LC++ R  +A    +++  K + PDV+ Y+ LV+G C  G I 
Sbjct: 332 KRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKID 391

Query: 270 EA-------------------------------------ERVFREMKMAGIQPNVYTYSI 292
           EA                                     +RV+  M   G   N+ TY+I
Sbjct: 392 EAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNI 451

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID     G++T+A +++ + ++ G  PN+ T+  L+    K         ++N+ +  G
Sbjct: 452 LIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASG 511

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                  YN L+   C++  +E A  +   M     +P+  +FN+I     K GDV  A 
Sbjct: 512 TRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAK 571

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +  +M ++   P+ +T++IL+  F      D    L + M      P+   +  L+  Y
Sbjct: 572 ELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGY 631

Query: 473 CGMGHWNNAYKYIREMIEE 491
              G        +++M ++
Sbjct: 632 SLKGKTEKVVSMLQQMADK 650



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 141/326 (43%), Gaps = 44/326 (13%)

Query: 95  SLGFSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY- 151
           +LG  +        P  V +  +++  CGV     + + +   N + ++ EF   PD++ 
Sbjct: 358 ALGILETMAKKGKKPDVVTYSTLVKGLCGVGK---IDEAVDLLNLLMSK-EFHIKPDVFA 413

Query: 152 -HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            + +I    K R+   A      M  R     + T++IL+  Y+ AG   +A+  +    
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + G +P+   ++++I+ LC+ +  S A+  F+  +     P V  Y  L+   CR  ++ 
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVE 533

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDA--------------------------------- 296
           +A  +F+EM+ A   P+V +++I+ID                                  
Sbjct: 534 QARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILI 593

Query: 297 --LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
               + GQ+  A  ++  M+  G  P+++ F++L++ +    +TEKV+ +  QM      
Sbjct: 594 NRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVV 653

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVL 380
            D+   + ++ C C   K  D  K+L
Sbjct: 654 LDSKLTSTILACLCNMSKDVDIEKIL 679


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 173/320 (54%), Gaps = 2/320 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M E   +PD  ++ I+I  L +  + ++A++ F  L      P  + YT+L+ G C A +
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
             +A  +F +M   G  P+  TY+++IDA C+ G +  A D+  +M+E G  P+ +T+N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +M    K+SR E+ L ++N+M+RLGC  +  ++N +I   C+  K++ A +V + M  K 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P++ ++ ++   ++K G +N A++++ +M D    P+ VTYN+++     + + D  L
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L K M      P+  T+ ILI  +C  G  + A++ ++ M ++  + P    Y  ++  
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV-PDVVTYSTLISG 299

Query: 508 LRRAGQLQKHEELVEKMVDR 527
           L    ++     L+E MV R
Sbjct: 300 LCSIARVDDARHLLEDMVKR 319



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 172/373 (46%), Gaps = 2/373 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A      M+++++     ++ IL+    +AG   EA   F RM + G  P  + ++
Sbjct: 165 KIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN 224

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           +VI  +C      EA   F S++ K   P    +  L+   C+ G + EA R+ + M   
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDD 284

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G  P+V TYS +I  LC   ++  A  +  +M++  C+P  +T N L+    KA R ++ 
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            +V + M   G   D +TYN L+  HC+ G+ E A ++L+ MV +G  PN  T+  +   
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K   +  A  ++ +MK   C PN  TY  L+  F ++   D  LKL  EM    + P+
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEE-KCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
              Y  L    C  G    A + +RE  E  +    G  VY   +  L  AG+++     
Sbjct: 465 HVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGF 524

Query: 521 VEKMVDRGFTARP 533
           V  MV  G    P
Sbjct: 525 VRDMVRGGQLPAP 537



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 181/379 (47%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+       FD A      M  R    +  T+++++    + G+  EA     +M 
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD + ++ V+  LC+  R  EA   F+ ++     P+   +  ++ G C+   I 
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A +VF EM+   I P+ ++Y I+ID L + G++  A+ +F  ML+ G  P+++T+N ++
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                A   ++ L+++  M+  GC     T+N LID HCK GKL++A ++L  M   G  
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV 287

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++ +   +  +  V+ A  +   M   +C+P  VT N L+     +       ++
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M  +   P+V TY  L+  +C  G    A + + +M+  + L P    Y  ++  L 
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV-ARGLAPNVVTYTALVSGLC 406

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +A +L +   +  +M   G
Sbjct: 407 KANRLPEACGVFAQMKSSG 425



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 179/356 (50%), Gaps = 2/356 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  RNV     ++ IL+    +AG   +A + F ++   G  P  +A++ +I  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 234 ASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+  F D  +    P  + Y  ++   C+ G + EA  + ++M   G  P+V TY+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           V+D LC+  ++  A  +F EM  +GC PN  + N ++    + S+ ++  QV+++M+   
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D+ +Y  LID   K GKL +A K+   M+  G  P+A T+N++   +     ++ A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  M+   C P+  T+NIL+         D   +L K M ++   P+V TY  LI+  
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C +   ++A   + +M++ +C KP       ++  L +AG++++  E+++ MV  G
Sbjct: 301 CSIARVDDARHLLEDMVKRQC-KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 179/385 (46%), Gaps = 2/385 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP  Y+ MI+ + K    + A   I  M        V T++ ++    ++    EA+  F
Sbjct: 79  SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 138

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           N ME  GC P++ + + +I  LC++ +  +A   F  ++ K   PD   Y  L+ G  +A
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKA 198

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G ++EA ++F+ M  +GI P+  TY++VI  +C    +  A ++F  M   GC P+  TF
Sbjct: 199 GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+  H K  + ++  ++  +M   G   D +TY+ LI   C   +++DA  +L  MV+
Sbjct: 259 NILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 318

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           + C P   T N +   + K G +  A  +   M      P+ VTYN L+     +  T+ 
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 378

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             +L  +M    + PNV TY  L++  C       A     +M    C  P    Y  ++
Sbjct: 379 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC-APNLFTYTALI 437

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFT 530
                AGQ+    +L  +MV  G +
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGIS 462



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 178/387 (45%), Gaps = 4/387 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y  +I+   K  + + A +    +    V  +   ++ L+     A    +A  
Sbjct: 7   SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
            F  M   GC P  + ++++I   C++    EA      + +D   PDV+ Y  ++ G C
Sbjct: 67  LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           ++  + EA  +F EM+  G  PN  +++ +I  LC+  +I +A  VF EM      P+S 
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++  L+    KA +  +  +++ +M   G     +TYN +I   C    L++A+++  SM
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KGC P+  TFN++     K G ++ A R+  +M D    P+ VTY+ L+    +    
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D    L ++M + + +P V T   LI   C  G    A + +  M+      P    Y  
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG-QSPDVVTYNT 365

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++    RAGQ ++  EL+  MV RG  
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLA 392



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 7/282 (2%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD+  Y  +I+    + + D A H ++ M  R  + TV T + L+    +AG   EA 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
              + M   G +PD + ++ ++   CR  +   A+    D +     P+V+ YT LV G 
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+A  + EA  VF +MK +G  PN++TY+ +I   C  GQ+     +F EM+  G  P+ 
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKR-LGCEA--DTITYNFLIDCHCKDGKLEDAIKV 379
           + +  L     K+ R+ + L++  + +  L  EA  D + Y F +D   + GK+E A+  
Sbjct: 466 VVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDGLLEAGKMEMALGF 524

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           +  MVR G  P       +   + K G    A  +  ++ DL
Sbjct: 525 VRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL 566


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 175/350 (50%), Gaps = 3/350 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFF 241
           V  ++ L+  Y +AG    A+  F R+++ G C P+ ++F  ++  LC+  RA++A + F
Sbjct: 11  VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 70

Query: 242 -DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            + L    + DV V   L+   CR G + +A R+   M       +V+TYS ++DAL + 
Sbjct: 71  QEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKA 130

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+  +A +VF+ M + GC P+++ +N L+    K  + ++ L++   M R G   D  TY
Sbjct: 131 GRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTY 190

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N +ID     G+ E A      M R+  +P+  T+N +   + KL   + A  ++ +M+ 
Sbjct: 191 NIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQA 250

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
            KC P+  T+  L+   A +   +  L+    + +    PN   Y  LI+ +C  G  + 
Sbjct: 251 NKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDK 310

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            Y+  ++MIE  C  P S  Y +++    R G      EL+++MV  G T
Sbjct: 311 GYELFQDMIECSCF-PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 359



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 163/319 (51%), Gaps = 3/319 (0%)

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGN 267
           E   CAPD +A++ +I+  C+      A   F  LK +   +P+ + +  LV   C+   
Sbjct: 3   ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            ++A  VF+EM  AG+Q +V   + +I   CR G + +A  +   M       +  T++ 
Sbjct: 63  ATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSY 122

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           LM    KA R  K L+V++ M++ GC  DT+ YN LI C  K GK+++A+++L  M RKG
Sbjct: 123 LMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 182

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T+N++   +S  G    A+  +G MK  K  P+ VTYN L+      + TD   
Sbjct: 183 IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEAC 242

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L  EM+ N+  P++ T+  LI      G   +A +    +++   + P S +Y  ++  
Sbjct: 243 DLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHV-PNSYIYNALISG 301

Query: 508 LRRAGQLQKHEELVEKMVD 526
             R+GQ+ K  EL + M++
Sbjct: 302 FCRSGQVDKGYELFQDMIE 320



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 159/329 (48%), Gaps = 2/329 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M    ++  V+  + L+    R G+  +A    + M  +    D   +S ++  L +  R
Sbjct: 73  MLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGR 132

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           A++A   F ++ K    PD +VY  L+    + G + EA  +  +M   GI P+  TY+I
Sbjct: 133 AAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 192

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VID L  CG+  +A+  F  M      P+ +T+N L+    K  RT++   ++++M+   
Sbjct: 193 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C  D  T+  LID   K G++EDA++    +V+ G  PN+  +N +     + G V+  +
Sbjct: 253 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGY 312

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  M +  C P+++TY IL+  F+    T M ++L +EM      P + TY +LI   
Sbjct: 313 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSL 372

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
              G   +AY   +EMI  K   P    Y
Sbjct: 373 SMAGQVEDAYTLFKEMI-AKGFNPDMQTY 400



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 152/320 (47%), Gaps = 39/320 (12%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           G +RQ   A   +  M +    + V T+S L+    +AG AA+A+  F+ M++ GC PD 
Sbjct: 96  GMLRQ---ARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDT 152

Query: 219 IAFSIVISILCRKRRASEA-----------------------------------QSFFDS 243
           + ++++IS L ++ +  EA                                    SFF  
Sbjct: 153 VVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGM 212

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +K  K  PDV+ Y  L+ G  +     EA  +F EM+     P++ T+  +ID L + G+
Sbjct: 213 MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGR 272

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A +  A ++++G  PNS  +N L+    ++ + +K  +++  M    C  D+ITY  
Sbjct: 273 MEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTI 332

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+    + G    A+++L  MVR+G  P  +T+N++ R +S  G V  A+ ++ +M    
Sbjct: 333 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 392

Query: 423 CEPNTVTYNILMQMFATSKS 442
             P+  TY+ L  +   +KS
Sbjct: 393 FNPDMQTYSALPNLSTPNKS 412


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 187/373 (50%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   A HF D + ++  ++   +++ L+    + G    A+    +++     P
Sbjct: 141 LKGQVKK---ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKP 197

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D + ++ +I  +C+ +  SEA   F  +  K    DV+ Y  L+ G+C  G + EA  + 
Sbjct: 198 DVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 257

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I PNVYTY+I++DALC+ G++  A  V A ML+   +P+ IT++ LM  +   
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +K   V+N M  +G   D  TY  LI+  CK+  +++A+ +   M +K   P   T+
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           + +   + K G ++    +  +M+D     + +TY+ L+     +   D  + L  +M++
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
            E+ PN+ T+ IL+   C  G   +A +  ++++  K        Y +++    + G L+
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL-TKGYHLNVYTYNVMINGHCKQGLLE 496

Query: 516 KHEELVEKMVDRG 528
           +   ++ KM D G
Sbjct: 497 EALTMLSKMEDNG 509



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 171/350 (48%), Gaps = 3/350 (0%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y+ +I+   K +    A+     M  + +   V T++ L+  +   G   EA+  
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGL 256

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
            N M      P+   ++I++  LC++ +  EA+S     LK   +PDVI Y+ L+ G+  
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              + +A+ VF  M + G+ P+V+TY+I+I+  C+   +  A ++F EM +    P  +T
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +++L+    K+ R   V  + ++M+  G  AD ITY+ LID  CK+G L+ AI + N M 
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +   PN  TF ++   + K G +  A  ++  +       N  TYN+++         +
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
             L +  +ME+N   PN  T+  +I         + A K +R+MI    L
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 185/386 (47%), Gaps = 6/386 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H+P +  ++++++   K++ +  A      ++ + ++  + T +IL+  +   G      
Sbjct: 55  HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
               ++ + G  PD +  + +I  LC K +  +A  F D  L   F+ + + Y  L+ G 
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ G+   A +  R++     +P+V  Y+ +IDA+C+   ++ A+ +F+EM   G   + 
Sbjct: 175 CKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADV 234

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+N L+       + ++ + + N+M       +  TYN L+D  CK+GK+++A  VL  
Sbjct: 235 VTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++    P+  T++ +      + +V  A  ++  M  +   P+  TY IL+  F  +K 
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-Y 501
            D  L L KEM +  + P + TY  LI   C  G  +  +  I EM +    +P   + Y
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG--QPADVITY 412

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDR 527
             ++  L + G L +   L  KM D+
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQ 438



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 134/281 (47%), Gaps = 1/281 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +I +  ++  + +  + S A  +   +++ GIQP++ T +I+I+  C  GQIT    V
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L+ G  P+++T N L++      + +K L  ++++   G + + ++Y  LI+  CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G    AIK L  +  +   P+   +N I   + K   V+ A+ ++ +M       + VT
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN L+  F         + L  EM    + PNV TY IL+   C  G    A K +  ++
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA-KSVLAVM 295

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + C+KP    Y  ++       +++K + +   M   G T
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 159/380 (41%), Gaps = 74/380 (19%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-L 244
           F+ ++  + +    + AV   +R+E  G  PD I  +I+I+  C   + +   S     L
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K  + PD +    L++G C  G + +A     ++   G Q N  +Y+ +I+ +C+ G  T
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGD-T 180

Query: 305 RAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           RA   F   ++    +P+ + +N ++    K     +   ++++M   G  AD +TYN L
Sbjct: 181 RAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL 240

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C  GKL++AI +LN MV K  NP                                 
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINP--------------------------------- 267

Query: 424 EPNTVTYNILMQMF------------------------ATSKSTDM-----VLKLKK--- 451
             N  TYNIL+                             + ST M     V ++KK   
Sbjct: 268 --NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQH 325

Query: 452 ---EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
               M    V P+V+TY ILI  +C     + A    +EM  +K + PG   Y  ++  L
Sbjct: 326 VFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM-HQKNMVPGIVTYSSLIDGL 384

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            ++G++    +L+++M DRG
Sbjct: 385 CKSGRISYVWDLIDEMRDRG 404


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 165/358 (46%), Gaps = 5/358 (1%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M+   V+  V T+++L+R   +      A    + M   GC PD+++   ++S +C+ 
Sbjct: 146 DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 205

Query: 232 RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
            R  EA+ F      +  P    Y  +V   C    + E   V  EM   G+QPNV TY+
Sbjct: 206 GRVEEARGFLA----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 261

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            ++DA C+  ++  A  + A M+ +GC PN +TF  L++   +  +    L +++ M   
Sbjct: 262 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 321

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G    TI+YN LI   C  G L+ A+   NSM R    PNA+T++ +    S  GD++GA
Sbjct: 322 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 381

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ +MK   C+PN V Y  ++ +       D    L  +M  +   PN  T+  LI  
Sbjct: 382 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 441

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            C  G    A      M    C  P    Y  +L  L R G  +    +V +M++ GF
Sbjct: 442 LCDCGRVGRALNVFHGMRRNGC-HPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGF 498



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 178/359 (49%), Gaps = 2/359 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K R+  +A   +  M S      V TF+ LV+ +   G   +A+  ++ M 
Sbjct: 260 YTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMV 319

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + G AP  I+++++I  LC       A  FF+S+K +   P+   Y+ LV G+  AG++ 
Sbjct: 320 DEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLD 379

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  ++ EMK +G +PNV  Y+ +ID LC+     +A  +  +ML   C PN++TFN L+
Sbjct: 380 GAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI 439

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  R  + L V++ M+R GC  +  TYN L+    ++G  +DA  ++  M+  G  
Sbjct: 440 GRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFE 499

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +  T+N +  C+ ++     A  + G+M     +P+  T+N ++  +       +   L
Sbjct: 500 LSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACL 559

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
             +M       NV  Y ILI+  C  G  +NA  Y+ +M+ E  + P  + + ++++ +
Sbjct: 560 LGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG-ICPNEATWNVLVRAI 617



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 175/375 (46%), Gaps = 5/375 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+ R +++ +  ++ M  R ++  V T++ +V  + +A     A     RM   GC P
Sbjct: 232 LCGEFRMWEV-FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTP 290

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + F+ ++       +  +A S +  + D+ + P  I Y  L+RG C  G++  A   F
Sbjct: 291 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 350

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             MK   + PN  TYS ++D     G +  A  ++ EM   GC+PN + + N++ V  K 
Sbjct: 351 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 410

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              ++   + ++M    C  +T+T+N LI   C  G++  A+ V + M R GC+PN  T+
Sbjct: 411 MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 470

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + + G+   A  M  +M +   E + VTYN ++            + L   M  
Sbjct: 471 NELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 530

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQLRRAGQL 514
             ++P+  T+  +I  YC  G  + A   + +M    C  P + V Y +++ +L   G+L
Sbjct: 531 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNC--PRNVVAYTILISELCNQGKL 588

Query: 515 QKHEELVEKMVDRGF 529
                 + KM+  G 
Sbjct: 589 SNAMVYLLKMLYEGI 603



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 37/274 (13%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  MI++  K   FD A   ID M   N      TF+ L+ R    G    A++ F+ M
Sbjct: 399 VYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGM 458

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
              GC P+   ++ ++  L R+    +A +   + L + FE  ++ Y  ++   C+    
Sbjct: 459 RRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMR 518

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  +   M + GIQP+ +T++ +I A C+ G+++ A  +  +M  V C  N       
Sbjct: 519 KHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN------- 571

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                                        + Y  LI   C  GKL +A+  L  M+ +G 
Sbjct: 572 ----------------------------VVAYTILISELCNQGKLSNAMVYLLKMLYEGI 603

Query: 389 NPNASTFNMIFRCI-SKLGDVNGAHRMYGKMKDL 421
            PN +T+N++ R I + +G +   H     ++DL
Sbjct: 604 CPNEATWNVLVRAIFTNIGTIGPIHLFKYIVEDL 637


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++   G+ R        ++ M++  +   + T++I +R   RAG   +A      ME
Sbjct: 230 YSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTME 289

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD + ++++I  LC   +  +A+  +  ++    +PD++ Y  L+  +   G++ 
Sbjct: 290 DEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLE 349

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             +R + EM+  G  P+V TY+I+++ALC+ G++ +A D+   M   G  PN  T+N L+
Sbjct: 350 TVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLI 409

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              +   R ++ L+++N M+ LG      +Y   ID + K G  E A+     M ++G  
Sbjct: 410 SGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIM 469

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ +  N     ++++G +  A  ++  + +    P++VTYN++M+ ++ +   D   KL
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKL 529

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM     EP++     LI      G  + A++    + + K L P    Y +++  L 
Sbjct: 530 LTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK-LAPTVVTYNILITGLG 588

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G+L K  +L   M + G
Sbjct: 589 KEGKLLKALDLFGSMKESG 607



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 182/383 (47%), Gaps = 5/383 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PDL  Y  +++  G     +    F   M++      V T++ILV    ++G   +A 
Sbjct: 328 HKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAF 387

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
              + M   G  P+   ++ +IS L   RR  EA   F++++     P    Y   +  +
Sbjct: 388 DMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY 447

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G+  +A   F +MK  GI P++   +  + +L   G+I  A D+F ++   G  P+S
Sbjct: 448 GKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDS 507

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+N +M+ + KA + +K  ++  +M   GCE D I  N LID   K G++++A ++   
Sbjct: 508 VTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGR 567

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +      P   T+N++   + K G +  A  ++G MK+  C PNTVT+N L+     + +
Sbjct: 568 LKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDA 627

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D+ LK+   M      P+V TY  +I      G    A+ +  +M  +K L P      
Sbjct: 628 VDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM--KKFLSPDHVTLY 685

Query: 503 MVLQQLRRAGQLQKHEELVEKMV 525
            +L  + + G+++   ++V + V
Sbjct: 686 TLLPGVVKDGRVEDAIKIVMEFV 708



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 196/436 (44%), Gaps = 43/436 (9%)

Query: 132 LSFFNWVTARPEFVHSPDLYH---EMINLAGKVRQFDLAWHFIDLM-------------- 174
           LS+F  V+  P  VH+P+  +   E + + G+V   D+A+ F DLM              
Sbjct: 106 LSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVE--DMAFVF-DLMQKQVINRNPNTYLT 162

Query: 175 -------------------KSRNVEITVDTFSI--LVRRYVRAGLAAEAVHAFNRMEEYG 213
                              K R     ++ +S   L+   ++ G   EA+  + RM   G
Sbjct: 163 IFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG 222

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
             P    +S ++  L R+R         + ++     P++  YT  +R   RAG I +A 
Sbjct: 223 LKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAY 282

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + + M+  G  P+V TY+++IDALC  G++ +A +++ +M     +P+ +T+  LM   
Sbjct: 283 GILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKF 342

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
                 E V + +++M+  G   D +TY  L++  CK GK++ A  +L+ M  +G  PN 
Sbjct: 343 GNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNL 402

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N +   +  L  ++ A  ++  M+ L   P   +Y + +  +      +  L   ++
Sbjct: 403 HTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEK 462

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M++  + P++      +     MG    A K I   I    L P S  Y M+++   +AG
Sbjct: 463 MKKRGIMPSIAACNASLYSLAEMGRIREA-KDIFNDIHNCGLSPDSVTYNMMMKCYSKAG 521

Query: 513 QLQKHEELVEKMVDRG 528
           Q+ K  +L+ +M+  G
Sbjct: 522 QIDKATKLLTEMLSEG 537



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 168/387 (43%), Gaps = 40/387 (10%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++++++ Y +AG   +A      M   GC PD I  + +I  L +  R  EA   F  L
Sbjct: 509 TYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL 568

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           KD K  P V+ Y  L+ G  + G + +A  +F  MK +G  PN  T++ ++D LC+   +
Sbjct: 569 KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAV 628

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  M  + C P+ +T+N ++   +K  R       Y+QMK+     D +T   L
Sbjct: 629 DLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTL 687

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG---------------------------------CNP 390
           +    KDG++EDAIK++   V +                                  CN 
Sbjct: 688 LPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNS 747

Query: 391 NASTFNMIF---RCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMV 446
                N+I    R + K      A +++ K  K L   P   +YN LM        T+  
Sbjct: 748 ICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAA 807

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           LKL  EM+     PN+ TY +L+  +      +  ++   EM+   C KP    + +++ 
Sbjct: 808 LKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGC-KPNIITHNIIIS 866

Query: 507 QLRRAGQLQKHEELVEKMVDRGFTARP 533
            L ++  + K  +L  +++   F+  P
Sbjct: 867 ALVKSNSINKALDLYYEIISGDFSPTP 893



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 146/293 (49%), Gaps = 1/293 (0%)

Query: 174  MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
            MK+      + T+++L+  + ++    E    +N M   GC P+ I  +I+IS L +   
Sbjct: 814  MKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNS 873

Query: 234  ASEAQS-FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             ++A   +++ +   F P    Y  L+ G  +AG   EA ++F EM     +PN   Y+I
Sbjct: 874  INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933

Query: 293  VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
            +I+   + G +  A D+F  M++ G  P+  ++  L+       R +  +  + ++K  G
Sbjct: 934  LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993

Query: 353  CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
             + DT++YN +I+   K  +LE+A+ + + M  +G +P   T+N +       G V+ A 
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 413  RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
            +M+ +++ +  EPN  TYN L++  + S + D    + K+M      PN  T+
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 165/353 (46%), Gaps = 41/353 (11%)

Query: 214  CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEA 271
            C  D +   + I +LC++++A +A+  FD         P    Y  L+ G     NI+EA
Sbjct: 749  CQDDNLILPL-IRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGC-NITEA 806

Query: 272  E-RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
              ++F EMK AG  PN++TY++++DA  +  +I    +++ EML  GC+PN IT N ++ 
Sbjct: 807  ALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIIS 866

Query: 331  VHVK-----------------------------------ASRTEKVLQVYNQMKRLGCEA 355
              VK                                   A R+E+ ++++ +M    C+ 
Sbjct: 867  ALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKP 926

Query: 356  DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
            +   YN LI+   K G +  A  +   M+++G  P+  ++ ++  C+   G V+ A   +
Sbjct: 927  NCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYF 986

Query: 416  GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             ++K    +P+TV+YN+++     S+  +  L L  EM+   + P + TY  LI  +   
Sbjct: 987  EELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNA 1046

Query: 476  GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G  + A K   E+ +   L+P    Y  +++   ++G   +   + +KM+  G
Sbjct: 1047 GMVDQAGKMFEEL-QFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVG 1098



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 196/468 (41%), Gaps = 48/468 (10%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQ 163
            +SP +V + +   C  + G    Q+      +T        PD+   + +I+   K  +
Sbjct: 502 GLSPDSVTYNMMMKCYSKAG----QIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGR 557

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            D AW     +K   +  TV T++IL+    + G   +A+  F  M+E GC P+ + F+ 
Sbjct: 558 VDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNA 617

Query: 224 VISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++  LC+      A   F  +      PDV+ Y  ++ G  + G    A   + +MK   
Sbjct: 618 LLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF- 676

Query: 283 IQPNVYTYSIVIDALCRCGQITRA----------------HDVFAEMLEV---------- 316
           + P+  T   ++  + + G++  A                + V+ E++E           
Sbjct: 677 LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEA 736

Query: 317 -----GCEPNSITFNN-----LMRVHVKASRTEKVLQVYNQM-KRLGCEADTITYNFLID 365
                G   NSI  ++     L+RV  K  +     +++++  K LG      +YN L+D
Sbjct: 737 ISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMD 796

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
                   E A+K+   M   GC PN  T+N++     K   ++    +Y +M    C+P
Sbjct: 797 GLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKP 856

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N +T+NI++     S S +  L L  E+   +  P   TY  LI      G    A K  
Sbjct: 857 NIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIF 916

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            EM + +C KP  ++Y +++    +AG +    +L ++M+  G   RP
Sbjct: 917 EEMPDYQC-KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGI--RP 961



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 156/338 (46%), Gaps = 1/338 (0%)

Query: 157  LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
            L  + +  D    F    KS     T ++++ L+   +   +   A+  F  M+  GC P
Sbjct: 762  LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCP 821

Query: 217  DKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
            +   +++++    + +R  E    ++  L    +P++I +  ++    ++ +I++A  ++
Sbjct: 822  NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881

Query: 276  REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             E+      P   TY  +I  L + G+   A  +F EM +  C+PN   +N L+    KA
Sbjct: 882  YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKA 941

Query: 336  SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
                    ++ +M + G   D  +Y  L++C    G+++DA+     +   G +P+  ++
Sbjct: 942  GNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSY 1001

Query: 396  NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
            N++   + K   +  A  ++ +MK+    P   TYN L+  F  +   D   K+ +E++ 
Sbjct: 1002 NLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQF 1061

Query: 456  NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
              +EPNV TY  LI  +   G+ + A+   ++M+   C
Sbjct: 1062 MGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 3/190 (1%)

Query: 142  PEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            P++   P+  +Y+ +IN  GK    ++A      M    +   + +++ILV      G  
Sbjct: 920  PDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRV 979

Query: 200  AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
             +AVH F  ++  G  PD ++++++I+ L + RR  EA S F  +K++   P++  Y  L
Sbjct: 980  DDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNAL 1039

Query: 259  VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
            +  +  AG + +A ++F E++  G++PNV+TY+ +I    + G   RA  VF +M+ VGC
Sbjct: 1040 ILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099

Query: 319  EPNSITFNNL 328
             PN+ TF  L
Sbjct: 1100 SPNAGTFAQL 1109



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 1/219 (0%)

Query: 143  EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
            +F  +P  Y  +I    K  + + A    + M     +     ++IL+  + +AG    A
Sbjct: 888  DFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIA 947

Query: 203  VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRG 261
               F RM + G  PD  +++I++  L    R  +A  +F+ LK    +PD + Y  ++ G
Sbjct: 948  CDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMING 1007

Query: 262  WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
              ++  + EA  +F EMK  GI P +YTY+ +I      G + +A  +F E+  +G EPN
Sbjct: 1008 LGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPN 1067

Query: 322  SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
              T+N L+R H K+   ++   V+ +M  +GC  +  T+
Sbjct: 1068 VFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 182/376 (48%), Gaps = 3/376 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV-HAFNRM 209
           Y  +I+   + R+F  A  F + MK    + ++ T+++++  Y + G + E +   F  M
Sbjct: 120 YTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEM 179

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           +  G  PD+  ++  I+         EA   F  +K     PD + Y  L+  + +AG  
Sbjct: 180 KAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWY 239

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           +EA  V +EM+ AG  PN+ TY+ ++ A  R G    A ++   M+  G EP+  T+ +L
Sbjct: 240 NEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSL 299

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  + +A + E+ +++YNQM+   C  ++ T+N LI  H K+    + + +   M   G 
Sbjct: 300 LSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGV 359

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +     K G  +   +++  MK    EP+  T+NIL++ +    S+D  L 
Sbjct: 360 EPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALS 419

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +   M +    P++ T+  L+      G W +A + I + +     KP    Y  +L   
Sbjct: 420 IYDGMLQAGCTPDLATFNTLLAALAREGRWEHA-ELILDELNRSSYKPNDIAYASMLHAY 478

Query: 509 RRAGQLQKHEELVEKM 524
              G+L+K +E+V+ +
Sbjct: 479 ANGGELEKLKEMVDTL 494



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 191/443 (43%), Gaps = 72/443 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+++  G+    + A    D M S+ +E  V T++ L+  Y RAG   +A+  +N+M 
Sbjct: 261 YNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMR 320

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
              C P+   F+ +I +  + +  SE    F+ ++    EPD++ + +L+  + + G  S
Sbjct: 321 TSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYS 380

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E  +VFR MK AG +P+  T++I+I+A  RCG   +A  ++  ML+ GC P+  TFN L+
Sbjct: 381 EVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLL 440

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE--------------- 374
               +  R E    + +++ R   + + I Y  ++  +   G+LE               
Sbjct: 441 AALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVP 500

Query: 375 --------------------DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                               +A     +M   G   + STFN +     K G ++ A   
Sbjct: 501 FTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDT 560

Query: 415 YGKMKDLKCEPNTVTYNILMQMF-----------------ATSKSTDMV----------- 446
           +  ++    EP+ VTYN LM M+                 A  ++ D+V           
Sbjct: 561 FALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSK 620

Query: 447 -------LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                   ++  EM  N ++P+  TY   +  Y   G +  A   ++ M +  C KP   
Sbjct: 621 HGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGC-KPDEV 679

Query: 500 VYEMVLQQLRRAGQLQKHEELVE 522
            Y  ++    + G+ ++ E +++
Sbjct: 680 TYRTLVDAYCKIGKFEEVERILK 702



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 152/342 (44%), Gaps = 3/342 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ ++   GK   +         MK    E    TF+IL+  Y R G + +A+  
Sbjct: 361 PDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSI 420

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           ++ M + GC PD   F+ +++ L R+ R   A+   D L +  ++P+ I Y +++  +  
Sbjct: 421 YDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYAN 480

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + + + +   +    +          +    +C  +  A D F  M   G   ++ T
Sbjct: 481 GGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTST 540

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN ++ ++ K    +K    +  ++  G E D +TYN L+  + ++G        L   +
Sbjct: 541 FNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECM 600

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  ++N +    SK G ++ A R++ +M     +P++ TYN  +  +       
Sbjct: 601 AAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFP 660

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             L + K M +   +P+  TYR L+  YC +G +    + ++
Sbjct: 661 EALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 12/306 (3%)

Query: 224 VISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           ++  L R+ + ++A   F+ ++    F PD +    ++R   R   ++   R+F+ ++  
Sbjct: 52  IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT-EK 340
           G   +VY Y+ +I AL R  +   A   F +M E G +P+ +T+N ++ ++ K  R+ E 
Sbjct: 112 GYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWEN 171

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL-EDAIKVLNSMVRKGCNPNASTFNMIF 399
           +L+++ +MK  G + D  TYN  I   C  G L E+A ++   M    C P+  T+N + 
Sbjct: 172 ILELFEEMKAQGIQPDEYTYNTAITA-CASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
               K G  N A  +  +M+   C PN VTYN L+  F  +   +   ++K  M    +E
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIE 290

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+V TY  L++ Y   G    A +   +M    C  P S  +  ++      G   K++ 
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNC-TPNSFTFNALI------GMHGKNKN 343

Query: 520 LVEKMV 525
             E MV
Sbjct: 344 FSEMMV 349



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 7/264 (2%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           +L   N  + +P  +    + H   N  G++ +       +D + +  V  T       V
Sbjct: 455 ILDELNRSSYKPNDIAYASMLHAYAN-GGELEKLK---EMVDTLHTIYVPFTKILLKTFV 510

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FE 249
             Y +  L  EA  AF  M  +G   D   F+ +IS+  +K    +A   F  L+    E
Sbjct: 511 LVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLE 570

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PDV+ Y  L+  + R G   + E   RE   AG  P++ +Y+ VI +  + GQ++ A  +
Sbjct: 571 PDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRI 630

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F EM+  G +P+S T+N  +  +V      + L V   M + GC+ D +TY  L+D +CK
Sbjct: 631 FHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCK 690

Query: 370 DGKLEDAIKVLNSMVRKGCNPNAS 393
            GK E+  ++L  +  K  +PN S
Sbjct: 691 IGKFEEVERILKFI--KSSDPNFS 712



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 5/249 (2%)

Query: 284 QPNVYTYSI--VIDALCRCGQITRAHDVFAEMLE-VGCEPNSITFNNLMRVHVKASRTEK 340
           +PN+ +  +  ++  L R GQ  +A +VF  M + V   P+ +T   ++R+  + S+   
Sbjct: 41  EPNLSSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTT 100

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           V +++  ++  G   D   Y  LI    ++ K ++A+     M   G  P+  T+N+I  
Sbjct: 101 VSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIID 160

Query: 401 CISKLG-DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
              K G        ++ +MK    +P+  TYN  +   A+    +   +L  +M+ +   
Sbjct: 161 LYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCT 220

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+  TY  L+ +Y   G +N A   ++EM    CL P    Y  +L    RAG      E
Sbjct: 221 PDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCL-PNIVTYNELLSAFGRAGLCNAAAE 279

Query: 520 LVEKMVDRG 528
           + + MV +G
Sbjct: 280 MKDSMVSKG 288


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 198/385 (51%), Gaps = 4/385 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y+ +++   K  +   A   +  MKSR +    +T++ILV  Y + G   EA +
Sbjct: 240 SPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAAN 299

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
               M +    PD   ++++I+ LC + R  EA    D +++ K  PDV+ Y  L+ G  
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
               ISEA ++  EM   G++PN  T++I++   C+ G++  A +   +M E G  P+ +
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+  + KA    +  +  ++M R   + D++T N ++   C++ KLE+A K+L+S 
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            ++G   +  ++  +     K G+V+ A +++ +MK+ +  P+TVTYN ++        T
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  +    E+ E+ + P+  TY  ++  YC  G    A+++  +M+E    KP      +
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS-FKPDVFTCNI 598

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           +L+ L   G L+K  +L    V +G
Sbjct: 599 LLRGLCMEGVLEKALKLFNTWVSKG 623



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 191/384 (49%), Gaps = 4/384 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN      + + A+   D M++  +   V +++ L+   +     +EA   
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              M E G  P+ +  +I++   C++ +  +A +    +++  F PD + Y  L+ G+C+
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AGN+ EA R   EM    ++ +  T + ++  LCR  ++  A+ + +   + G   + ++
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  + K    ++ L+++++MK       T+TYN +I   C+ GK E AI  LN ++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+ +T+N I     + GDV  A + + KM +   +P+  T NIL++        +
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             LKL           +  TY  LIT  C  G  ++A+  + EM EEK L P    Y  +
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM-EEKELGPDHYTYNAI 669

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           +  L  +G++++ EE + KM+++G
Sbjct: 670 ITALTDSGRIREAEEFMSKMLEKG 693



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 186/422 (44%), Gaps = 29/422 (6%)

Query: 131 VLSFFNWV-TARPEFVHS------------------PDLYHEMINLAGKVRQFDLAWHFI 171
           ++SFF W  T  P F H+                   D    ++      R+ DL  H  
Sbjct: 69  LISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDL--HLS 126

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
            L  +   +  +DT    +  YV++G    A   F +M+     P+ +  + +++ L R 
Sbjct: 127 ILRLTSPSKALLDT---AIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRY 183

Query: 232 RRASEA----QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
             +       ++F D++K    P+V  +  ++ G+C      +A      M      P+ 
Sbjct: 184 PSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDN 243

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ ++D LC+ G++  A D+  +M   G  PN  T+N L+  + K    ++   V   
Sbjct: 244 VTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M +     D  TYN LI+  C +G++E+A K+ + M      P+  ++N +     +   
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A ++  +M +   +PN VT+NI+++ +      D       +MEE+   P+  TY  
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI  YC  G+   A++ + EM   K +K  S     +L+ L R  +L++  +L+     R
Sbjct: 424 LINGYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482

Query: 528 GF 529
           G+
Sbjct: 483 GY 484



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 36/311 (11%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+    K  + D A + I  M+         T++ L+  Y +AG   EA    + M    
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
              D +  + ++  LCR+++  EA     S + + +  D + Y  L+ G+ + GN+  A 
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +++ EMK   I P+  TY+ +I  LC+CG+  +A     E+LE G  P+  T+N ++  +
Sbjct: 509 KLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGY 568

Query: 333 VKASRTEKVLQVYNQM--------------------------KRL---------GCEADT 357
            +    EK  Q +N+M                          K L         G   DT
Sbjct: 569 CREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDT 628

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           +TYN LI   CK+G+L+DA  +L+ M  K   P+  T+N I   ++  G +  A     K
Sbjct: 629 VTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSK 688

Query: 418 MKDLKCEPNTV 428
           M +    P+ V
Sbjct: 689 MLEKGNLPDQV 699



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 143/284 (50%), Gaps = 4/284 (1%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR---CGQITRA 306
           P   +    +  + ++G    A ++F++MK   ++PN+ T + ++++L R      ++ +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            + F + +++G  PN  TFN ++  +   ++ +  ++  N M +  C  D +TYN ++D 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK G+L DA  +L  M  +G  PN +T+N++     K+G +  A  +   M      P+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TYN+L+         +   KL+ EME  ++ P+V +Y  LI         + A+K + 
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           EM  EK +KP +  + ++++   + G++      + KM + GF+
Sbjct: 373 EM-SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 115/255 (45%), Gaps = 24/255 (9%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A    D MK + +  +  T++ ++    + G   +A+   N + E G  PD+  ++ +
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 225 ISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +   CR+    +A  F + + ++ F+PDV     L+RG C  G + +A ++F      G 
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGK 624

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
             +  TY+ +I +LC+ G++  A ++ +EM E    P+  T+N ++     + R  +  +
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684

Query: 344 VYNQMKRLGCEAD-----------------------TITYNFLIDCHCKDGKLEDAIKVL 380
             ++M   G   D                       ++ Y+  I   C +GK +DA+++ 
Sbjct: 685 FMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744

Query: 381 NSMVRKGCNPNASTF 395
               +KG   + ST+
Sbjct: 745 GESKQKGITVDKSTY 759



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 26/208 (12%)

Query: 157 LAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L G  R+ D+  A+ F + M   + +  V T +IL+R     G+  +A+  FN     G 
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGK 624

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAER 273
           A D + ++ +I+ LC++ R  +A +    +++K   PD   Y  ++     +G I EAE 
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684

Query: 274 VFREMKMAGIQPN-----------------------VYTYSIVIDALCRCGQITRAHDVF 310
              +M   G  P+                          YS  I  LC  G+   A  +F
Sbjct: 685 FMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRT 338
            E  + G   +  T+ NLM   +K  ++
Sbjct: 745 GESKQKGITVDKSTYINLMDGLIKRRKS 772


>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g80550, mitochondrial; Flags: Precursor
 gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
 gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 448

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 208/409 (50%), Gaps = 30/409 (7%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFS 187
           + L FFNWV     F H+ + ++ +I++ GK  +F+++W  I+ M   N E   +  TF 
Sbjct: 63  KALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG-NTESVPNHVTFR 121

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF---DSL 244
           I+ +RYV A L  EA+ A+++++++    D+ +F  ++  LC  +   EA+      + +
Sbjct: 122 IVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVI 180

Query: 245 KDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            + F   +  ++  ++RGW + G   + +  +++M   G+  ++++YSI +D +C+ G+ 
Sbjct: 181 GNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKP 240

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  ++ EM     + + + +N ++R    +   E  ++V+ +M+  GCE +  T+N +
Sbjct: 241 WKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTI 300

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C+DG++ DA ++L+ M ++GC P++ T+  +F  + K  ++     ++G+M     
Sbjct: 301 IKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGRMIRSGV 357

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P   TY +LM+ F        VL + K M+E+   P+   Y  +I      G  + A +
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMARE 417

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           Y  EMI E+ L P                  ++  ELVEK +D     R
Sbjct: 418 YEEEMI-ERGLSP------------------RRRPELVEKSLDETLVCR 447


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 181/401 (45%), Gaps = 37/401 (9%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           F  A     LM  R    T  T++ L++    AG+  EA+  F  M   GCAPD   +SI
Sbjct: 125 FAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSI 184

Query: 224 VISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++  LC   RA EA +   D++   F P+V VY  L+ G+C  G++  A  +F+ M+  G
Sbjct: 185 MVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKG 244

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             PNV TY+ +I   C+ G++ RA  +++ M+E G  PN +T+  L++        E   
Sbjct: 245 CLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAF 304

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           ++ + M+  G   +  T   LID  CK G++E+A + L S+V+KG   N   +  +   +
Sbjct: 305 RLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDAL 364

Query: 403 SKLGDVNGAH---------------RMYGKMKDLKC--------------------EPNT 427
            K G  +GAH                MY  + D  C                    + N 
Sbjct: 365 CKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANA 424

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           V + IL+        +D    +   M    V+P+V TY + I  YC  G   +A   + +
Sbjct: 425 VPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQ 484

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           MI+   ++P  + Y  +++     G + +    ++ M+D G
Sbjct: 485 MIDHG-VRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNG 524



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 199/441 (45%), Gaps = 53/441 (12%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS---------------- 187
           FV +  +Y+ +I+        +LA      M+S+     V T++                
Sbjct: 210 FVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAM 269

Query: 188 ILVRRYVRAGLAAEAV----------------HAF---NRMEEYGCAPDKIAFSIVISIL 228
           +L  R + AGLA   V                HAF   + ME  G AP++    ++I  L
Sbjct: 270 VLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDAL 329

Query: 229 CRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C+  R  EAQ F  SL  K  + + ++YT+++   C++G    A  + +++   G  P+ 
Sbjct: 330 CKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDA 389

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
           + YS +ID LCR  ++  A  +  +M+E G + N++ F  L+  H++  R++    + ++
Sbjct: 390 HMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDR 449

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M   G + D +TY   I  +C+DG++EDA  ++  M+  G  PN +T+N + +  + LG 
Sbjct: 450 MAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGL 509

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST-DMV-----------LKLKKEMEE 455
           V+ A      M D  C+PN  +Y +L+ +     S  D+V           +K+ +E+ E
Sbjct: 510 VSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLE 569

Query: 456 NEVEPNVNT----YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
             ++   ++    Y   I     +     A  ++  M +   L P   VY  +++   R 
Sbjct: 570 EVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGM-QSANLTPSEDVYTCMIECCYRM 628

Query: 512 GQLQKHEELVEKMVDRGFTAR 532
             L++    ++ MV R +  R
Sbjct: 629 KLLKEALRFLDSMVKRNYLPR 649



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 141/311 (45%), Gaps = 2/311 (0%)

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++ +I+  C       A+    SL +    PD   YT+ V G+CR G  + A R+F  M 
Sbjct: 77  YTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMP 136

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G     +TY+ ++  LC  G +  A  VFA M   GC P+S  ++ ++     A R  
Sbjct: 137 QRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAG 196

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           + + +       G   +   YN LID +C  G LE AI +   M  KGC PN  T+  + 
Sbjct: 197 EAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLI 256

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
               K G V  A  +Y +M +    PN VTY  L+Q   +    +   +L   ME   + 
Sbjct: 257 CGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLA 316

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           PN  T  +LI   C  G    A +++  ++ +K +K    +Y  ++  L ++G+      
Sbjct: 317 PNEWTCLVLIDALCKHGRIEEAQQFLGSLV-QKGIKVNQVIYTSMIDALCKSGKFDGAHN 375

Query: 520 LVEKMVDRGFT 530
           L++K++  GF 
Sbjct: 376 LMQKIITEGFV 386



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/384 (21%), Positives = 165/384 (42%), Gaps = 18/384 (4%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  MI+   K  +FD A + +  + +         +S L+    R     EA+   N M
Sbjct: 356 IYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM 415

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E G   + + F+I+I    R+ R+   +   D +     +PDV+ YT  +R +C+ G +
Sbjct: 416 IESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRM 475

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +AE +  +M   G++PN+ TY+ +I      G +++A      M++ GC+PN  ++  L
Sbjct: 476 EDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVL 535

Query: 329 MRVHVKASRTE---------------KVLQ-VYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           + + +K +                  KVL+ +  ++ +L C + +  Y+  I C  K  +
Sbjct: 536 LGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDR 595

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           LE+A   L  M      P+   +  +  C  ++  +  A R    M      P   +Y  
Sbjct: 596 LEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRF 655

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           ++       S      +  ++   E   +   ++ILI      G+  +  + +  M E+ 
Sbjct: 656 IICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQN 715

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQK 516
           C +PGS++Y  +  ++    + Q+
Sbjct: 716 C-RPGSAIYSRLTGEITVTSEAQE 738



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 130/316 (41%), Gaps = 42/316 (13%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +     L+    R G +S+ E +   M +     N++TY+ +I+A C  G +  A   
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVR----NLHTYTTLINAYCHAGDLPAAKRH 96

Query: 310 FAEMLEVGCEPNS-----------------------------------ITFNNLMRVHVK 334
            + +L  G  P+S                                    T+  L++    
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A    + + V+  M   GC  D+  Y+ ++   C  G+  +A+ +L   + KG  PN + 
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N +       GD+  A  ++  M+   C PN  TY  L+  F  S   +  + L   M 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRAGQ 513
           E  + PNV TY  LI   C  GH  +A++ +  M  E C L P      +++  L + G+
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM--EACGLAPNEWTCLVLIDALCKHGR 334

Query: 514 LQKHEELVEKMVDRGF 529
           +++ ++ +  +V +G 
Sbjct: 335 IEEAQQFLGSLVQKGI 350



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/358 (18%), Positives = 138/358 (38%), Gaps = 59/358 (16%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV    +Y  +I+   +  +   A   ++ M    V+     F+IL+ +++R   +    
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
              +RM   G  PD + +++ I   C+  R  +A+S    + D    P++  Y  L++G+
Sbjct: 445 MISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA----------- 311
              G +S+A    + M   G +PN  +Y++++  L +       HD+ A           
Sbjct: 505 ANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLK---KNSYHDLVADSISLWKIVDM 561

Query: 312 --------EMLEVGCEPNSITFNNLMRVHVKASRTE--KVLQVYNQMKRLGCEADTIT-- 359
                   E++++ C   S  ++  +R   K  R E  K   V  Q   L    D  T  
Sbjct: 562 KVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCM 621

Query: 360 -------------------------------YNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                                          Y F+I   C++G    A  +   ++ K  
Sbjct: 622 IECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEY 681

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-QMFATSKSTDM 445
           N +   + ++   + + G+     R+   M++  C P +  Y+ L  ++  TS++ ++
Sbjct: 682 NRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQEI 739


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 194/392 (49%), Gaps = 7/392 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMK--SRNVEITVDTFSILVRRYVRAGLA 199
           P F H+ D YH +I+   + R FD     +  +   S +++   D F  ++R Y  AG  
Sbjct: 43  PGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRP 102

Query: 200 AEAVHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE--PDVIVYT 256
             A+  F R+ EE+   P     + ++++  + +R     S   + KDK+   P+V  + 
Sbjct: 103 RLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFN 162

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L++  C+  ++  A +VF EM   G+ PN+ TY+ ++      G +  A  VF+E+ + 
Sbjct: 163 ILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDK 222

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P++ T+  LM  + K  R    ++V + M+  G E + +TY  +ID +CK+ K  +A
Sbjct: 223 GWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEA 282

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
             +++ M+ K   P+++    +   + + G V  A  ++ +M +  C P+    + L+  
Sbjct: 283 RNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHW 342

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                      KL  E E+  + P++ TY  LI   C  G  N A +   +M+E++C +P
Sbjct: 343 LCKEGKVWEARKLFDEFEQGTI-PSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRC-RP 400

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +  Y M+++   +AG +++   ++E+M+D G
Sbjct: 401 NAFTYNMLIKGFMKAGVVKEGVRILEEMLDNG 432



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 6/229 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MI+   K ++   A + ID M  +    +      ++      G    A H + RM 
Sbjct: 266 YGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRML 325

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           E  C PD    S +I  LC++ +  EA+  FD  +    P ++ Y  L+ G C  G ++E
Sbjct: 326 EKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNE 385

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A R++ +M     +PN +TY+++I    + G +     +  EML+ GC PN  T+  L+ 
Sbjct: 386 AGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIE 445

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI-----DCHCKDGKLE 374
             ++ S  E  +     M     E D  +++  +     +  C  G L+
Sbjct: 446 -GLQESGMEGDVDKVMSMAMASREVDADSWDLFLHKIVGNLDCGTGALD 493


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 182/371 (49%), Gaps = 2/371 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MIN   K  + +     +D M  + +  +V T++ L+  Y + G+   A    + M 
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMH 171

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
              C P++  ++ +I   CRK+    A +     L+ +  P V+ Y +L+ G C+ G + 
Sbjct: 172 SNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLD 231

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+   M   G+ P+ +TYS+ ID LC+ G+I  A+ +F  + E G + N + +  L+
Sbjct: 232 SAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALI 291

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA + +    + ++M    C  ++ TYN LID  CK+ K+++A+ ++ SM++KG  
Sbjct: 292 DGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLK 351

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
               T+ ++   + K GD + AHR+  +M     +P+   Y   +  F T  +      +
Sbjct: 352 CTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDM 411

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M E  V P+  TY ++I  Y G+G  N A+  ++ M +  C  P    Y  +++ L 
Sbjct: 412 MSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGC-DPSHHTYSCLIKHLL 470

Query: 510 RAGQLQKHEEL 520
           +    +K++ +
Sbjct: 471 KEELTKKYKNV 481



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 183/385 (47%), Gaps = 2/385 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   +V + D   +    M+  +   TV T++++V     +G   EA++ F+ M 
Sbjct: 42  YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+   ++++I+ +C++ +  E +   D + +K   P V  Y  L+ G+C+ G + 
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVE 161

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A+ +   M      PN  TY+ +I   CR   + RA  + ++MLE    P+ +T+N+L+
Sbjct: 162 AAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLI 221

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K    +   ++ N M   G   D  TY+  ID  CK G++E+A  + NS+  KG  
Sbjct: 222 HGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIK 281

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N   +  +     K G ++ A+ +  +M    C PN+ TYN L+      +     L L
Sbjct: 282 ANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLL 341

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M +  ++  V TY ILI      G ++ A++ + +M+     +P   +Y   +    
Sbjct: 342 MESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG-YQPDVYIYTAFIHAFC 400

Query: 510 RAGQLQKHEELVEKMVDRGFTARPL 534
             G +++ E+++  M +RG     L
Sbjct: 401 TRGNIKEAEDMMSMMFERGVMPDAL 425



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 161/329 (48%), Gaps = 2/329 (0%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVR 260
           A   FN M + GC  ++++++ +I  LC   R  E  + F  ++ D   P V  YT +V 
Sbjct: 23  AFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVH 82

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
               +G   EA  +F EM+  G +PN++TY+++I+A+C+  ++     +  EM+E G  P
Sbjct: 83  ALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVP 142

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +  T+N L+  + K    E   ++ + M    C  +  TYN LI   C+   +  A+ +L
Sbjct: 143 SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL 202

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M+     P+  T+N +     K+G ++ A+R+   M +    P+  TY++ +      
Sbjct: 203 SKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKK 262

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +    L   ++E  ++ N   Y  LI  YC  G  ++A   +  M+ E CL P SS 
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL-PNSST 321

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y  ++  L +  ++Q+   L+E M+ +G 
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGL 350



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 142/283 (50%), Gaps = 10/283 (3%)

Query: 258 LVRGWCRAGNISEAE---------RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +V G+C+ GN+ EA           VF  M   G + N  +Y+ +I  LC  G++    +
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F +M E  C P   T+  ++    ++ R  + + ++++M+  GCE +  TY  +I+  C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+ KLE+  ++L+ MV KG  P+  T+N +     K G V  A  +   M    C PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TYN L+  F   K+    + L  +M E+ + P+V TY  LI   C +G+ ++AY+ +  +
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN-L 239

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           + E  + P    Y + +  L + G++++   L   + ++G  A
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKA 282



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 159/405 (39%), Gaps = 65/405 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+I    + +    A   +  M    +  +V T++ L+    + G    A    N M 
Sbjct: 182 YNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMN 241

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD+  +S+ I  LC+K R  EA   F+SLK+K  + + ++YT L+ G+C+AG + 
Sbjct: 242 ENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMD 301

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCR--------------------C--------- 300
           +A  +   M      PN  TY+ +ID LC+                    C         
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI 361

Query: 301 ------GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
                 G    AH +  +M+  G +P+   +   +         ++   + + M   G  
Sbjct: 362 VAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK---------- 404
            D +TY  +ID +   G L  A  VL  M   GC+P+  T++ + + + K          
Sbjct: 422 PDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV 481

Query: 405 ----------LGDVNGAHRM---------YGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
                       DV    +M         + KM +  C PN  TY  L+          +
Sbjct: 482 ALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGV 541

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             KL   M E  V P+   Y  L+   C +G + +A + +  M+E
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 30/349 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K R+   A   ++ M  + ++ TV T++IL+   ++ G    A    ++M 
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   ++  I   C +    EA+     + ++   PD + YT ++  +   G ++
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLN 441

Query: 270 EAERVFREMKMAGIQPNVYTYSIVID--------------ALC---------------RC 300
            A  V + M   G  P+ +TYS +I               ALC               + 
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKM 501

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +   A ++F +MLE GC PN  T+  L+    K  R     ++++ M   G       Y
Sbjct: 502 MKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIY 561

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N L++C C+ G   DA++++ +M+  G  P   + N++F  + + G    A  ++  +  
Sbjct: 562 NSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQ 621

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                + V + IL+     +  +D   +L   ME    + +  TYR+LI
Sbjct: 622 CGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 1/165 (0%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVR 260
           A+  F +M E+GC+P+   ++ +I  LC+  R   AQ  FD + ++   P   +Y +L+ 
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
             C  G   +A R+   M   G  P + + +++   L   G   +A  VF+ +L+ G   
Sbjct: 567 CCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYND 626

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           + + +  L+   +K   ++   ++   M+  GC+    TY  LI+
Sbjct: 627 DEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIE 671


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 195/384 (50%), Gaps = 6/384 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRM 209
           Y  +I    +  + DL +  +  +  +   +   TF+ L++        ++A+     RM
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----FEPDVIVYTNLVRGWCRA 265
            E GC PD  +++ ++  LC + R+ EA      + D       PDV+ Y  ++ G+ + 
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G+  +A   + EM   GI P+V TYS +I ALC+   + +A +V   M++ G  P+ +T+
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+++  +  + + ++ +    +M+  G E + +TY+ L++  CK+G+  +A K+ +SM +
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G  P+ +T+  + +  +  G +   H +   M     +P+   +NIL+  +A  +  D 
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            + +  +M ++ + PNV  Y  +I + C  G  ++A  Y  +MI+E  L P   VY  ++
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG-LTPNIIVYTSLI 453

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L    +  K EEL+ +M+DRG 
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGI 477



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 184/374 (49%), Gaps = 8/374 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K  +   A    D M  R +E  + T+  L++ Y   G   E     + M 
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   F+I+I    ++ +  +A   F  ++     P+V+ Y  ++   C++G++ 
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   F +M   G+ PN+  Y+ +I  LC C +  +A ++  EML+ G   N+I FN+++
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H K  R  +  ++++ M R+G + D ITYN LID  C  GK+++A K+L SMV  G  
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  +     ++  ++ A  ++ +M      PN +TYNI++Q    ++ T    +L
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQ 506
              + ++  +  ++TY I++   C     NN       M +  C   L+  +  + +++ 
Sbjct: 609 YVSITKSGTQLELSTYNIILHGLC----KNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 664

Query: 507 QLRRAGQLQKHEEL 520
            L + G++ + ++L
Sbjct: 665 ALLKCGRMDEAKDL 678



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 169/347 (48%), Gaps = 2/347 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V +++ ++  + + G + +A   ++ M + G  PD + +S +I+ LC+ +   +A    +
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           ++ K+   PD + Y +++ G+C +G   EA    ++M+  G++PNV TYS +++ LC+ G
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G EP+  T+  L++ +       ++  + + M R G + D   +N
Sbjct: 321 RSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI  + K  K++ A+ V + M + G NPN   +  +   + K G V+ A   + +M D 
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN + Y  L+    T    D   +L  EM +  +  N   +  +I  +C  G    +
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 500

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            K    M+    +KP    Y  ++     AG++ +  +L+  MV  G
Sbjct: 501 EKLFDLMVRIG-VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 165/378 (43%), Gaps = 36/378 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    ++     F+IL+  Y +     +A+  F++M ++G  P+ + +  VI +LC
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG------W-------------------- 262
           +     +A  +F+ + D+   P++IVYT+L+ G      W                    
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 263 ---------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                    C+ G + E+E++F  M   G++P++ TY+ +ID  C  G++  A  + A M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + VG +P+ +T+  L+  + + SR +  L ++ +M   G   + ITYN ++       + 
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A ++  S+ + G     ST+N+I   + K    + A RM+  +     +  T T+NI+
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +         D    L      N + P+V TY ++       G           M E  C
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722

Query: 494 LKPGSSVYEMVLQQLRRA 511
                 +  +V + L+R 
Sbjct: 723 SADSRMLNSIVRKLLQRG 740



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 160/357 (44%), Gaps = 2/357 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I++  K    D A  + + M    +   +  ++ L+          +A      M 
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G   + I F+ +I   C++ R  E++  FD + +   +PD+I Y  L+ G C AG + 
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++   M   G++P++ TY  +I+  CR  ++  A  +F EM+  G  PN IT+N ++
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +      RT    ++Y  + + G + +  TYN ++   CK+   ++A+++  ++      
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
               TFN++   + K G ++ A  ++         P+  TY+++ +      S + +  L
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 713

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
              MEEN    +      ++      G    A  Y+  MI+EK     +S    +L+
Sbjct: 714 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLF-MIDEKHFSLEASTASFLLE 769



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 12/303 (3%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA-----GIQPNVYTY 290
           +A+  FD L  +     I   N  R        S A  V R  +MA      + P V+TY
Sbjct: 38  DARHVFDELLRRGRGASIYGLN--RALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTY 95

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
           +I+I   CR G++         +++ G   ++ITF  L++      RT   +  V  +M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK---GCNPNASTFNMIFRCISKLG 406
            LGC  D  +YN L+   C + + ++A+++L+ M      G  P+  ++N +     K G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           D + A+  Y +M D    P+ VTY+ ++     +++ D  +++   M +N V P+  TY 
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++  YC  G    A   +++M  +  ++P    Y  ++  L + G+  +  ++ + M  
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDG-VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 527 RGF 529
           RG 
Sbjct: 335 RGL 337


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 180/371 (48%), Gaps = 4/371 (1%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R  D A  + + +     E T+ T+++LV    +A     A   F  M   G  PD IA+
Sbjct: 177 RDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAY 236

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           S +I  L +  R  EA+   D +  +   P  + YT++V G C+ G I EA +  +EM+ 
Sbjct: 237 SSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRR 296

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
             ++P V TYS ++      G++ +A  V  EM +  C P++I++   +       R E+
Sbjct: 297 RRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREE 356

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
             +V+  M   GC+ D  TY  +ID  CK+G +  A  VL  M +    PN   + MI  
Sbjct: 357 AEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMD 416

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME--ENEV 458
              K   +  A  +Y ++      P+TVTYN ++      K  D  L+L +EM+  + E+
Sbjct: 417 GFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL 476

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP++ TY ++I     +G    A+  + EMI+   + P    Y  ++Q L  AG++ +  
Sbjct: 477 EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI-PDCFTYTSLIQTLAGAGKVSRAM 535

Query: 519 ELVEKMVDRGF 529
           EL+E+M+  G 
Sbjct: 536 ELLEEMLKAGI 546



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 197/439 (44%), Gaps = 50/439 (11%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L F++W   RP F H+  L+     L   VR   L+   +   +S   E  V +F+IL+R
Sbjct: 80  LGFYHWAATRPGFSHT--LFTRNSLLLALVRGGHLS-DALGFFQSSISEPNVSSFNILLR 136

Query: 192 RYVRAGLAA----EAVHAFNR-MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK- 245
                G AA    E V+A  R M+  G   +     +++S LC +R   +A S+F+S+  
Sbjct: 137 -----GFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSP 191

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL-------- 297
           +K EP +  YT LV G C+A  +  A  VF EM   G +P++  YS +ID L        
Sbjct: 192 NKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDE 251

Query: 298 ---------------------------CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
                                      C+CG+I  A     EM      P   T++ ++ 
Sbjct: 252 ARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVT 311

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            ++   + EK   V  +M    C  DTI+Y   I+     G+ E+A KV  +MV KGC P
Sbjct: 312 GYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP 371

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +  T+ +I     K G +  A  +   M     +PN   Y ++M  F  S   +  L+L 
Sbjct: 372 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 431

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK-CLKPGSSVYEMVLQQLR 509
           + + ++ + P+  TY  +I   C +   + A + +REM   K  L+P    Y M++  L 
Sbjct: 432 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 491

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G  ++  +L+ +M+D G
Sbjct: 492 KVGMEERAFDLLAEMIDNG 510



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 180/375 (48%), Gaps = 11/375 (2%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + PD+  Y  +I+   K  + D A   +DLM +R    T   ++ +V    + G   EAV
Sbjct: 229 YKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAV 288

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                M      P    +S +++      +  +A +  + + D+   PD I YT  +   
Sbjct: 289 KTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEAL 348

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
              G   EAE+VF  M   G +P+++TY I+ID  C+ G +  A  V   M +   +PN 
Sbjct: 349 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNR 408

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             +  +M   VK+SR E+ L++Y ++ + G    T+TYN +I+  CK  K+++A+++L  
Sbjct: 409 YIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLRE 468

Query: 383 MVRKG--CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           M R+     P+  T++MI   + K+G    A  +  +M D    P+  TY  L+Q  A +
Sbjct: 469 MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 528

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
                 ++L +EM +  + P+ +TY  L+ + C     + A+  ++EM     ++ G + 
Sbjct: 529 GKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWDLLQEM-----MRNGHTP 582

Query: 501 YEMVLQQLRRAGQLQ 515
            E   + + +  +LQ
Sbjct: 583 NEFTFKAVEKGFRLQ 597


>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
 gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
          Length = 485

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 187/380 (49%), Gaps = 7/380 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR---NVEITVDTFSI 188
            +FF W   +P + HS   YH MI++ GK+R+FD AW  ID M+     +  +T  T  I
Sbjct: 61  FTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLI 120

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++RRY      A+A++ F   + +G       F  ++S LCR +   +A+      KD F
Sbjct: 121 MIRRYCAVHDVAKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVF 180

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
             +   +  ++ GWC  G++ + ERV++EM   GI  +  +Y+  I    +   + +   
Sbjct: 181 PFNTKSFNIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLR 240

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F +M  +  +P+   +N ++    K    ++   +   M+  G  A+ +TYN +I   C
Sbjct: 241 LFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLC 300

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K  + ++A  V   ++++G  P   T++   R +    ++     +  KM+ + C P T 
Sbjct: 301 KARRFDEARAVFEELLQRGLCPTIQTYHAFLRFLRTEEEI---FELLKKMRTMGCNPTTD 357

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY +L++ F   +  D V ++  EM EN + P+ ++Y +LI      G   +A+KY  EM
Sbjct: 358 TYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYYLEM 417

Query: 489 IEEKCLKPGSSVYEMVLQQL 508
            +EK L P   + E++   L
Sbjct: 418 -KEKDLLPEPKIDEVLQTWL 436



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/310 (19%), Positives = 113/310 (36%), Gaps = 76/310 (24%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVIVYTN----LVRGWCRAGNISEAERVFREMK 279
           +ISIL + R+   A +  D ++       +V       ++R +C   ++++A   F   K
Sbjct: 83  MISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVAKAINTFYAHK 142

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G    +  +  ++ ALCR   +  A  +        C  +   FN             
Sbjct: 143 RFGFNIGLEEFQSLLSALCRYKNVKDAEYLLF------CNKDVFPFN------------- 183

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
                            T ++N +++  C  G L D  +V   M R+G + +A ++    
Sbjct: 184 -----------------TKSFNIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCI 226

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
            C SK+ +++   R++  MK +K +P+   YN ++   A  +       L K MEE  + 
Sbjct: 227 SCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGII 286

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            NV TY                                      V++ L +A +  +   
Sbjct: 287 ANVVTY------------------------------------NSVIKPLCKARRFDEARA 310

Query: 520 LVEKMVDRGF 529
           + E+++ RG 
Sbjct: 311 VFEELLQRGL 320


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 185/373 (49%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+++Q   A+ F D + +        ++  L+    + G    A+    R++     P
Sbjct: 167 LKGQIQQ---AFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + ++ +I  +C+ +  +EA   F  +  K   PDV+ Y+ L+ G+C  G + +A  +F
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M +  I+P+VYT++I+++A C+ G++     VF  M++ G +PN +T+N+LM  +   
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               K   ++N M + G   D  +Y+ +I+  CK  K ++A+ +   M RK   P+  T+
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           + +   +SK G ++ A ++  +M D    PN  TYN ++     +   D  + L  + ++
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKD 463

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
              +P+++TY ILI   C  G   +A K   +++  K        Y +++Q     G   
Sbjct: 464 KGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL-VKGYNLDVYAYTIMIQGFCVEGLFN 522

Query: 516 KHEELVEKMVDRG 528
           +   L+ KM D G
Sbjct: 523 EALALLSKMEDNG 535



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 185/380 (48%), Gaps = 2/380 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +++++    K + +    +    M+ R ++  +   +IL+  + + GL   A   F ++ 
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD I F+ +   LC K +  +A  F D +    F  D I Y  L+ G C+ G   
Sbjct: 148 KMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  + + +    +QPNV  Y+ +ID++C+   +  A D+F+EM+  G  P+ +T++ L+
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + +  + ++N+M     + D  T+N L++  CKDGK+++   V + M+++G  
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N +      + +VN A  ++  M      P+  +Y+I++  F   K  D  + L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEM    + P+V TY  LI      G  + A + + +M  ++ + P    Y  +L  L 
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM-HDRGVPPNICTYNSILDALC 446

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           +  Q+ K   L+ K  D+GF
Sbjct: 447 KTHQVDKAIALLTKFKDKGF 466



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 196/400 (49%), Gaps = 14/400 (3%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           + +L   F QIS        T+ H + K    R  + LLQ +   +    +P  V    +
Sbjct: 181 VVALGFHFDQISYG------TLIHGLCKVGETRAALDLLQRV---DGNLVQPNVV----M 227

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   KV+  + A+     M S+ +   V T+S L+  +   G   +A+  FN+M 
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNIS 269
                PD   F+I+++  C+  +  E ++ FD  +K   +P+ + Y +L+ G+C    ++
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A+ +F  M   G+ P++ +YSI+I+  C+  +   A ++F EM      P+ +T+++L+
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K+ R    LQ+ +QM   G   +  TYN ++D  CK  +++ AI +L     KG  
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ 467

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ ST++++ + + + G +  A +++  +       +   Y I++Q F      +  L L
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALAL 527

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
             +ME+N   P+  TY I+I         + A K +REMI
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 187/380 (49%), Gaps = 2/380 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   KV +   A   +  +    V+  V  ++ ++    +  L  EA   F+ M 
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV 252

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +PD + +S +IS  C   +  +A   F+ +  +  +PDV  +  LV  +C+ G + 
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E + VF  M   GI+PN  TY+ ++D  C   ++ +A  +F  M + G  P+  +++ ++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  + ++ + ++ +M R     D +TY+ LID   K G++  A+++++ M  +G  
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N I   + K   V+ A  +  K KD   +P+  TY+IL++    S   +   K+
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKV 492

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +++       +V  Y I+I  +C  G +N A   + +M +  C+ P +  YE+++  L 
Sbjct: 493 FEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCI-PDAKTYEIIILSLF 551

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           +  +    E+L+ +M+ RG 
Sbjct: 552 KKDENDMAEKLLREMIARGL 571



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 168/365 (46%), Gaps = 2/365 (0%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A    + +  RN       F+ ++   V++      ++   +ME  G  P+ +  +I+
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 225 ISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I+  C+      A S F   LK  + PD I +T L +G C  G I +A     ++   G 
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF 186

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
             +  +Y  +I  LC+ G+   A D+   +     +PN + +N ++    K     +   
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           ++++M   G   D +TY+ LI   C  GKL+DAI + N M+ +   P+  TFN++     
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFC 306

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G +     ++  M     +PN VTYN LM  +   K  +    +   M +  V P++ 
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +Y I+I  +C +  ++ A    +EM   K + P    Y  ++  L ++G++    +LV++
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEM-HRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 524 MVDRG 528
           M DRG
Sbjct: 426 MHDRG 430



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 1/240 (0%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  +YS           +  A  +F  +L     P +  FN ++   VK+     VL + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M+  G + + +  N LI+C C+ G +  A  V   +++ G  P+  TF  + + +   
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A   + K+  L    + ++Y  L+        T   L L + ++ N V+PNV  Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             +I   C +   N A+    EM+  K + P    Y  ++      G+L+   +L  KM+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMV-SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 3/177 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+   K  +   A   +D M  R V   + T++ ++    +     +A+  
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIAL 457

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
             + ++ G  PD   +SI+I  LC+  +  +A+  F+ L  K +  DV  YT +++G+C 
Sbjct: 458 LTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCV 517

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            G  +EA  +  +M+  G  P+  TY I+I +L +  +   A  +  EM+  G   N
Sbjct: 518 EGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 200/423 (47%), Gaps = 22/423 (5%)

Query: 124 HGIPLLQVLSFFNWVT-----ARPEFVHS----------PDL--YHEMINLAGKVRQFDL 166
           HG+PL  V+   NWV       R  F H+          PD   +  ++    +  +F+ 
Sbjct: 142 HGLPL--VVETANWVLRVGLRQRHHFAHARQAFDGMGVRPDARSFRALVLGCCQEGRFEE 199

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  M      +   T +++VR + R G   +    F RM E G  P+ + ++  + 
Sbjct: 200 ADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVD 259

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM-KMAGIQ 284
            LC++    +A    + +  K  +P+V  +T+L+ G C+ G    A R+F ++ K +  +
Sbjct: 260 GLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYK 319

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV+TY+++I   C+ G++ RA  +   M+E G  PN+ T+  L+  H +    ++  ++
Sbjct: 320 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFEL 379

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            N+MK  G   +  TYN +I   CK GK++ A KVL     +G  P+  T+ M+     K
Sbjct: 380 MNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCK 439

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G +  A  ++ +M +  C P+  TY  ++ M+   +  +   +L  +     + P   T
Sbjct: 440 QGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQT 499

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  +I  YC +G   +A K    M++  CL P    Y  ++  L +  +L++   L E M
Sbjct: 500 YTSMIAGYCRVGKSTSALKVFERMVQHGCL-PDPITYGALISGLCKESRLEEARALFETM 558

Query: 525 VDR 527
           +D+
Sbjct: 559 LDK 561



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 149/318 (46%), Gaps = 4/318 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +P       L   +  +    R F L   F+ L+KS + +  V T+++++  Y + G  A
Sbjct: 283 KPNVYTHTSLIDGLCKIGWTERAFRL---FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLV 259
            A     RM E G AP+   ++ +I   CR      A    + +K + F P++  Y  ++
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+C+ G I +A +V R     G+ P+  TY+++I   C+ G IT A D+F +M E  C 
Sbjct: 400 GGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCH 459

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+  T+  ++ ++ +  + E+  Q++++   +G      TY  +I  +C+ GK   A+KV
Sbjct: 460 PDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKV 519

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              MV+ GC P+  T+  +   + K   +  A  ++  M D    P  VT   L   +  
Sbjct: 520 FERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCR 579

Query: 440 SKSTDMVLKLKKEMEENE 457
              T + +     +++ +
Sbjct: 580 RDKTTIAVSFLDGLDKRQ 597



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 40/299 (13%)

Query: 233 RASEAQSFFDSLKDKFEPDVIVYTNLVR--GWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           R  EA      L+    P V+   N V   G  +  + + A + F  M   G++P+  ++
Sbjct: 128 RLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSF 184

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
             ++   C+ G+   A  + A M   G   +S T   ++R   +  R   V  ++ +M  
Sbjct: 185 RALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVE 244

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
           +G   + + Y   +D  CK G ++ A  VL  MV KG  PN  T   +   + K+G    
Sbjct: 245 MGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTER 304

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A R++                               LKL K    +  +PNV+TY ++I 
Sbjct: 305 AFRLF-------------------------------LKLVKS---SSYKPNVHTYTVMIG 330

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            YC  G    A   +  M+E+  L P ++ Y  ++    R G   +  EL+ KM   GF
Sbjct: 331 GYCKEGKLARAEMLLGRMVEQG-LAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGF 388


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 175/411 (42%), Gaps = 12/411 (2%)

Query: 123 RHGIPLLQVLSFFNWV----TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN 178
           R G P   + +F+  V     ARP    +P LY+ +I+   +             M+   
Sbjct: 108 RAGAPDRALKTFYRAVHDLGCARPT---APRLYNHLIDALLRENMVGAVALVCGNMRKDG 164

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           V+  V T+++LVR   +      A    + M   GC PD + +  ++S LC   R  EA 
Sbjct: 165 VQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEAT 224

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
               +      P    Y  ++   CR   + E   V  +M   G+QPNV TY+ +++A C
Sbjct: 225 EVLSAAP----PVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFC 280

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           + G++  A  + A M+  GC PN  TF  L+       R    L ++  M   G    T+
Sbjct: 281 KAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTV 340

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           +YN LI   C  G L+ A  VLN M + GC PNA T++ +    SK GD++GA  ++  M
Sbjct: 341 SYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDM 400

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
               C+PN V Y  ++ +F      +    L  +M      PN  T+  LI   C     
Sbjct: 401 TRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRV 460

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             A     EM    C  P    Y  +L  L R G      ++V +M + G 
Sbjct: 461 GRALGVFHEMRRHGC-PPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGI 510



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 3/287 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
           ++++L+R     G    A    N ME++GC P+   +S +I    +      A S + D 
Sbjct: 341 SYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDM 400

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +   +P+V+VYTN+V  +C+    ++AE +  +M +    PN  T++ +I +LC C ++
Sbjct: 401 TRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRV 460

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            RA  VF EM   GC PN  T+N L+    +       LQ+  +M+  G E   +TYN +
Sbjct: 461 GRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTV 520

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +   C+     +A+  +  M+ +G  P+A TF  I     K G+V  A  + G M  + C
Sbjct: 521 VSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNC 580

Query: 424 EPNTVTYNILM-QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             N + Y ILM ++    K  D ++ L K + E  + PN  T+ +L+
Sbjct: 581 GRNILVYTILMAELCNQDKLEDAMVYLLKMLYEG-IYPNTVTWNVLV 626



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 36/252 (14%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           T+S L+  + +AG    A+  +N M   GC P+ + ++ ++ + C+K   ++A+S  D  
Sbjct: 376 TYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKM 435

Query: 244 LKDKFEPDVIVYTNLVRGWC-----------------------------------RAGNI 268
           L +   P+ + +  L+R  C                                   R GN 
Sbjct: 436 LVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNC 495

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A ++  EM+  GI+ ++ TY+ V+  LC+      A      M+  G +P++ TF  +
Sbjct: 496 GDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAI 555

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  + K         +   M  + C  + + Y  L+   C   KLEDA+  L  M+ +G 
Sbjct: 556 IHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGI 615

Query: 389 NPNASTFNMIFR 400
            PN  T+N++ R
Sbjct: 616 YPNTVTWNVLVR 627



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 117/275 (42%), Gaps = 9/275 (3%)

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-EVG 317
           VR    AG++   +   +EM++ G+          + A  R G   RA   F   + ++G
Sbjct: 68  VRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 127

Query: 318 CEPNSI--TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           C   +    +N+L+   ++ +    V  V   M++ G + +  TYN L+   C++ ++  
Sbjct: 128 CARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGA 187

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A K+L+ M  KGC P+  T+  I   +  LG V+ A  +          P   +YN ++ 
Sbjct: 188 ARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-----PVAASYNAVIL 242

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                     V  +  +M    ++PNV TY  ++  +C  G    A   +  M+   C  
Sbjct: 243 ALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGC-T 301

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           P  + +  ++  L   G++    ++ + MV  G+ 
Sbjct: 302 PNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWA 336



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 1/134 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  M++  +E+++ T++ +V    +  +  EA+    RM   G  PD   F+ +I 
Sbjct: 498 ALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIH 557

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C++     A     ++       +++VYT L+   C    + +A     +M   GI P
Sbjct: 558 AYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYP 617

Query: 286 NVYTYSIVIDALCR 299
           N  T+++++  + R
Sbjct: 618 NTVTWNVLVRGVFR 631


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 193/401 (48%), Gaps = 5/401 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I   C V      LQ+L   +    +P  V    +Y+ +I+   KV+  + A+     M
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVV----MYNTIIDSMCKVKLVNEAFDLYSEM 222

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
            S+ +   V T+S L+  +   G   +A+  FN+M      PD   FSI++   C++ R 
Sbjct: 223 VSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRV 282

Query: 235 SEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA++     +K   +PDV+ Y +L+ G+C    +++A+ +F  M   G+  NV +Y+I+
Sbjct: 283 KEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIM 342

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I+  C+  ++  A ++F EM      P+ +T+N+L+    K+ +    L++ ++M   G 
Sbjct: 343 INGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D ITYN ++D  CK+ +++ AI +L  M  +G  P+  T+ ++   + K G +  A  
Sbjct: 403 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQN 462

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  +          TY +++Q F  +   D  L L  +ME+N   PN  TY I+I    
Sbjct: 463 IFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLF 522

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
                + A K +REMI    L      Y +  +  +R   L
Sbjct: 523 EKDENDMAEKLLREMIARGLLFGWKKAYCLFTRFFQRRSNL 563



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 187/377 (49%), Gaps = 13/377 (3%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G++ Q   A HF D + +    +    +  L+    + G  + A+    R++     P
Sbjct: 138 LKGQIHQ---ALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 194

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + ++ +I  +C+ +  +EA   +  +  K   PDV+ Y+ L+ G+C  G +++A  +F
Sbjct: 195 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M    I P+VYT+SI++D  C+ G++  A +V A M++ G +P+ +T+ +LM  +   
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLV 314

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            +  K   ++N M + G  A+  +YN +I+  CK  K+++A+ +   M  K   P+  T+
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTY 374

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + K G ++ A ++  +M D     + +TYN ++     +   D  + L  +M++
Sbjct: 375 NSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 434

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV----YEMVLQQLRRA 511
             ++P++ TY ILI   C  G   +A     + I E  L  G ++    Y +++Q     
Sbjct: 435 EGIQPDMYTYTILIDGLCKGGRLKDA-----QNIFEDLLVKGYNITVYTYTVMIQGFCDN 489

Query: 512 GQLQKHEELVEKMVDRG 528
               K   L+ KM D G
Sbjct: 490 DLFDKALALLSKMEDNG 506



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 191/401 (47%), Gaps = 3/401 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           Q L F + V A   F  +   Y  +IN   KV Q   A   +  +  + V+  V  ++ +
Sbjct: 144 QALHFHDKVVALG-FHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTI 202

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           +    +  L  EA   ++ M   G +PD + +S +IS  C   + ++A   F+ +  ++ 
Sbjct: 203 IDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEI 262

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDV  ++ LV G+C+ G + EA+ V   M   GI+P+V TY  ++D  C   Q+ +A  
Sbjct: 263 NPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKS 322

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F  M + G   N  ++N ++    K  + ++ + ++ +M       D +TYN LID  C
Sbjct: 323 IFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLC 382

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K GK+  A+K+++ M  +G   +  T+N I   + K   V+ A  +  KMKD   +P+  
Sbjct: 383 KSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMY 442

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY IL+              + +++        V TY ++I  +C    ++ A   + +M
Sbjct: 443 TYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM 502

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +  C+ P +  YE+++  L    +    E+L+ +M+ RG 
Sbjct: 503 EDNGCI-PNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 167/345 (48%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+IL+  + + G    +   F  + + G  P+ I  + +I  LC K +  +A  F D +
Sbjct: 93  TFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKV 152

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
               F  + + Y  L+ G C+ G  S A ++ R +    +QPNV  Y+ +ID++C+   +
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A D+++EM+  G  P+ +T++ L+       +    + ++N+M       D  T++ L
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D  CK+G++++A  VL  M+++G  P+  T+  +      +  VN A  ++  M     
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV 332

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             N  +YNI++  F   K  D  + L KEM    + P+V TY  LI   C  G  + A K
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + EM  ++ +      Y  +L  L +  Q+ K   L+ KM D G
Sbjct: 393 LVDEM-HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 158/344 (45%), Gaps = 2/344 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSL 244
           F  ++   V+      A+     ME  G A D + F+I+I+   +      + S F + L
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANIL 118

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K  +EP+ I  T L++G C  G I +A     ++   G   N   Y  +I+ LC+ GQ +
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTS 178

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +   +     +PN + +N ++    K     +   +Y++M   G   D +TY+ LI
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALI 238

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
              C  GKL DAI + N M+ +  NP+  TF+++     K G V  A  +   M     +
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+ VTY  LM  +   K  +    +   M +  V  NV +Y I+I  +C +   + A   
Sbjct: 299 PDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNL 358

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +EM   K + P    Y  ++  L ++G++    +LV++M DRG
Sbjct: 359 FKEM-HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 1/282 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +  ++    +      A  + REM+  GI  ++ T++I+I+   + G    +  V
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           FA +L+ G EPN+IT   L++      +  + L  ++++  LG   + + Y  LI+  CK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G+   A+++L  +  K   PN   +N I   + K+  VN A  +Y +M      P+ VT
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+ L+  F      +  + L  +M   E+ P+V T+ IL+  +C  G    A K +  M+
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA-KNVLAMM 292

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            ++ +KP    Y  ++       Q+ K + +   M   G TA
Sbjct: 293 MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 127/254 (50%), Gaps = 14/254 (5%)

Query: 85  LNPD-FTIPSLSLGF---SQISTAHSISPSTVRHVIEKS----CGVRHGIPLLQVL---- 132
           +NPD +T   L  GF    ++  A ++    ++  I+      C +  G  L++ +    
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321

Query: 133 SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           S FN + A+     +   Y+ MIN   K+++ D A +    M  +N+   V T++ L+  
Sbjct: 322 SIFNTM-AQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDG 380

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
             ++G  + A+   + M + G   DKI ++ ++  LC+  +  +A +    +KD+  +PD
Sbjct: 381 LCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           +  YT L+ G C+ G + +A+ +F ++ + G    VYTY+++I   C      +A  + +
Sbjct: 441 MYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLS 500

Query: 312 EMLEVGCEPNSITF 325
           +M + GC PN+ T+
Sbjct: 501 KMEDNGCIPNAKTY 514



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 1/216 (0%)

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  +L +   P    F  ++   VK +  +  + ++ +M+  G  +D +T+N LI+C  +
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G    +  V  ++++KG  PNA T   + + +   G ++ A   + K+  L    N V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L+        T   L+L + ++   V+PNV  Y  +I   C +   N A+    EM+
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             K + P    Y  ++      G+L     L  KM+
Sbjct: 224 -SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMI 258


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 171/345 (49%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
           T++ L+  Y R GL  EA    N M + G  P    ++ +I+ LC+K R + A+    + 
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L     PD   Y  L+   CR  N SEA+ +F EM   G+ P++ ++S ++    R   +
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A   F +M + G  P+++ +  LM  + +     + L++ ++M   GC  D I YN +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++  CK+  L DA K+ + MV +G  P+  TF  +     + G++  A  ++G M     
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+ V YN L+  F      +   +L   M   ++ PN  TY ILI  YC +GH + A++
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               MI EK +KP       V++   R+G   K +E + +M+ +G
Sbjct: 303 LWDVMI-EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 153/301 (50%), Gaps = 5/301 (1%)

Query: 173 LMKSRNVEITVDT--FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           L++  N+ ++ DT  ++ L+    R    +EA   F  M   G  PD ++FS ++++  R
Sbjct: 59  LIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSR 118

Query: 231 KRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            R   +A  +F  +K KF   PD ++YT L+ G+CR GN+ EA ++  EM   G   +V 
Sbjct: 119 NRHLDQALVYFRDMK-KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ +++ LC+   +T A  +F EM+E G  P+  TF  L+  H +     K L ++  M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            +   + D + YN LID  CK G++E A ++ + M+ +   PN  T+ ++      +G V
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A R++  M +   +P  VT N +++ +  S  +    +    M    V P+  +Y  L
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357

Query: 469 I 469
           I
Sbjct: 358 I 358



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 172/361 (47%), Gaps = 2/361 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    +    + A+  ++ M  + ++ ++ T++ ++    + G  A A      M 
Sbjct: 4   YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +PD   ++ ++   CR+   SEA+  F + L+    PD++ +++L+  + R  ++ 
Sbjct: 64  NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLD 123

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   FR+MK  G+ P+   Y++++   CR G +  A  +  EMLE GC  + I +N ++
Sbjct: 124 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 183

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K        +++++M   G   D  T+  LI  HC+DG +  A+ +  +M ++   
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 243

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   +N +     K+G++  A  ++  M   K  PN +TY IL+  + +        +L
Sbjct: 244 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 303

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M E  ++P + T   +I  YC  G  + A +++  MI  K + P    Y  ++   +
Sbjct: 304 WDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI-AKGVAPDHISYNTLINDGK 362

Query: 510 R 510
           R
Sbjct: 363 R 363



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 130/254 (51%), Gaps = 3/254 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  ++ +  + R  D A  +   MK   +      +++L+  Y R G   EA+  
Sbjct: 104 PDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 163

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
            + M E GC  D IA++ +++ LC+++  ++A   FD + ++   PD   +T L+ G C+
Sbjct: 164 RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQ 223

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GN+++A  +F  M    I+P++  Y+ +ID  C+ G++ +A +++  M+     PN IT
Sbjct: 224 DGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHIT 283

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  +       +  ++++ M   G +   +T N +I  +C+ G    A + L  M+
Sbjct: 284 YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 343

Query: 385 RKGCNPNASTFNMI 398
            KG  P+  ++N +
Sbjct: 344 AKGVAPDHISYNTL 357


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 187/414 (45%), Gaps = 37/414 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y   I    KV  F +AW  I  +  +N  +    F+ ++    + G+  EA   F  M+
Sbjct: 248 YGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMK 307

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  PD  ++SI+I   CRK R  +A   F  +++    P++  Y+ L+ G+C+ G + 
Sbjct: 308 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 367

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  VF EMK +GI P+VY+YSI+ID  CR G +  A   + EM      P++  + +L+
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL---------------- 373
           + + K+ +    L+ +  M++LG   DTI  N ++  +C+                    
Sbjct: 428 KGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487

Query: 374 -------------------EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                              E A+++L  M+++   P+   ++ +  C +K  +   A  +
Sbjct: 488 FNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVML 547

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + KM  +    N  TY IL+ +F +    D+  +L K M+E+ V P+   Y  L+  +C 
Sbjct: 548 FIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCN 607

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G    A     EM  E C  P    Y   + +  +  +  +  +L EKM +RG
Sbjct: 608 TGEMTRARALFDEMSREGC-SPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERG 660



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 179/421 (42%), Gaps = 38/421 (9%)

Query: 148 PDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y   I + G  R+   D A      M++  +   + ++SIL+  + + G   +A+  
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           F  M+  G  PD  ++SI+I   CRK     A  F++ +  + F P    Y +L++G+ +
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432

Query: 265 AGNISEAERVFREMKMAGIQP-----------------------------------NVYT 289
           +   + A + FR M+  G+ P                                   N Y+
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS 492

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+  I  +CR     +A  +   ML+    P+ + ++ L+    K   +EK + ++ +M 
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT 552

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           ++G   +  TY  LI+    D K++ A ++   M      P+   +  +       G++ 
Sbjct: 553 KVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMT 612

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++ +M    C PN VTY   +  +      +   KL ++M+E  V P+   Y +LI
Sbjct: 613 RARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +C  G  N A     EM +E    P   +Y  ++    +  +  + E+L E+M  +G 
Sbjct: 673 AAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732

Query: 530 T 530
           +
Sbjct: 733 S 733



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 6/353 (1%)

Query: 183 VDTFSILVRRYVRA-GLAAE---AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           + T++I++  + R  G + +   A     ++   G  P+ + +   I  LC+      A 
Sbjct: 206 IHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAW 265

Query: 239 SFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
               +L  K +P +   +  ++ G C+ G + EA  VF+EMK +GI P+VY+YSI+ID  
Sbjct: 266 RLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGF 325

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           CR G++ +A +VF EM   G  PN  +++ L+    K  R +K L+V+ +MK  G   D 
Sbjct: 326 CRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDV 385

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            +Y+ LID  C+ G ++ AIK    M     +P+A  +  + +   K      A + +  
Sbjct: 386 YSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRI 445

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M+ L   P+T+  N ++ ++      +  L L ++ +EN V  N  +Y   I   C    
Sbjct: 446 MQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSV 505

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              A + +  M++   L P    Y  ++    +    +K   L  KM   G T
Sbjct: 506 PEKALQLLPVMLKRNVL-PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGIT 557



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 3/246 (1%)

Query: 145 VH-SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           VH +P  Y+E I+   +    + A   + +M  RNV   V  +S L+  + +   + +AV
Sbjct: 486 VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAV 545

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
             F +M + G   +   ++I+I++     +   A   F  +K+ +  PD I YT+LV G+
Sbjct: 546 MLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGF 605

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G ++ A  +F EM   G  PNV TY+  I+   +  +  +AH ++ +M E G  P+ 
Sbjct: 606 CNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQ 665

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           I +  L+          +   ++++MK+ G C  + + Y  LI+ + K  K + A K+  
Sbjct: 666 ILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYE 725

Query: 382 SMVRKG 387
            M  KG
Sbjct: 726 EMRAKG 731



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/355 (20%), Positives = 150/355 (42%), Gaps = 23/355 (6%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           E ++++FSI++  Y  AG++ E                   F ++  I+   +  +    
Sbjct: 82  ENSINSFSIIIHTYALAGMSWEV------------------FILIRDIVTFYKEENRDAG 123

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
              SL    E   +V+  L++ +     +  A  VF   K  GI+ N+ + + ++  L  
Sbjct: 124 ELVSLLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVE 183

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK----ASRTEKVLQVYNQMKRLGCEA 355
             ++     +F  +++ G  PN  T+  +M    +    +    +  ++  ++   G   
Sbjct: 184 DNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETP 243

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           + +TY   I   CK G    A +++ ++ RK    N   FN +   + + G ++ A  ++
Sbjct: 244 NVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVF 303

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +MK+    P+  +Y+IL+  F      D   ++ KEM  + + PN+ +Y ILI  +C  
Sbjct: 304 KEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKE 363

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           G  + A +   EM     L P    Y +++    R G +    +  E+M    F+
Sbjct: 364 GRVDKALEVFEEMKNSGIL-PDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFS 417


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 179/372 (48%), Gaps = 2/372 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  + D A   +D M    V +    ++ L+  YVR    A        ME  G      
Sbjct: 144 KSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVG 203

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++I++  L      S+ ++  D +K K    DV +YT ++  +CRAGN+  A  VF E 
Sbjct: 204 TYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDEC 263

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              GI+PN  TY ++I+  C+ GQ+  A  + A+M   G   N I FN ++  + +    
Sbjct: 264 VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMV 323

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +  L+V   M+++G E D  TYN L    C+  ++ +A  +L+ M+ KG  PN  T+  +
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                K GD+  A R++ +M      P+ VTYN++M  +    S     + +KEME+  +
Sbjct: 384 ISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGL 443

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+V TY  L+  +C  G  + A K   EM + +  +P    Y  ++  L + G+ ++  
Sbjct: 444 VPDVYTYASLVHGHCVNGKVDVALKLFEEM-KHRGTEPNVVAYTALISGLAKEGRSEEAF 502

Query: 519 ELVEKMVDRGFT 530
           +L + M+  G T
Sbjct: 503 QLYDDMLKAGLT 514



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 147/300 (49%), Gaps = 1/300 (0%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +D MK++NV   V  ++ ++  Y RAG    A   F+     G  P++  + ++I+  C+
Sbjct: 225 VDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCK 284

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             +   A+     ++ +    + I++  ++ G+CR G +  A +V   M+  GI+ +VYT
Sbjct: 285 IGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYT 344

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +   LCR  ++  A  +   M+E G  PN +T+  L+ +H K     +  +++ +M 
Sbjct: 345 YNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMA 404

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G     +TYN ++D + K G + +A +    M +KG  P+  T+  +       G V+
Sbjct: 405 GKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVD 464

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A +++ +MK    EPN V Y  L+   A    ++   +L  +M +  + P+ + Y  L+
Sbjct: 465 VALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 7/300 (2%)

Query: 150 LYHEMINL---AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           LY  +IN    AG VR+   A    D      +E    T+ +L+  + + G    A    
Sbjct: 239 LYTAVINAYCRAGNVRR---ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLL 295

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRA 265
             M+  G   ++I F+ +I   CR+     A     ++ K   E DV  Y  L  G CR 
Sbjct: 296 ADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRV 355

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             ++EA+ +   M   G+ PN  TY+ +I   C+ G +  A  +F EM   G  P+ +T+
Sbjct: 356 NRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTY 415

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N +M  ++K     +  +   +M++ G   D  TY  L+  HC +GK++ A+K+   M  
Sbjct: 416 NVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKH 475

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G  PN   +  +   ++K G    A ++Y  M      P+   Y+ L+    T    D+
Sbjct: 476 RGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDI 535



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 114/222 (51%), Gaps = 5/222 (2%)

Query: 146 HSPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H+  +++ MI+  G  RQ   D A      M+   +E+ V T++ L     R    AEA 
Sbjct: 305 HNQIIFNTMID--GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAK 362

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGW 262
              + M E G  P+ + ++ +ISI C++    EA+  F  +  K   P V+ Y  ++ G+
Sbjct: 363 TLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGY 422

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G+I EAER  +EM+  G+ P+VYTY+ ++   C  G++  A  +F EM   G EPN 
Sbjct: 423 IKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNV 482

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           + +  L+    K  R+E+  Q+Y+ M + G   D   Y+ L+
Sbjct: 483 VAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 109/273 (39%), Gaps = 36/273 (13%)

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           S+V+D  C+ G++  A  +  EM   G   N++ +N+L+  +V+     +V ++   M+ 
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195

Query: 351 LGCEADTITYNFLID-----------------------------------CHCKDGKLED 375
            G EA   TY  L+D                                    +C+ G +  
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A +V +  V  G  PN  T+ ++     K+G +  A  +   M+      N + +N ++ 
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            +      D  LK+K  ME+  +E +V TY  L    C +     A   +  MI EK + 
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI-EKGVP 374

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           P    Y  ++    + G + +   L  +M  +G
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKG 407


>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
          Length = 616

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 189/393 (48%), Gaps = 21/393 (5%)

Query: 147 SPDLYHEMINLAGKVRQ-FDLAWHFIDLMKSRNVEITVDTFSILVRRYV----RAGLAAE 201
            P      ++L+ ++R+   L    + L     +  T  TF IL  R      R  LA  
Sbjct: 91  GPSTLDLALDLSARLRRPRQLTNSILGLFPRHRLAFTPRTFPILFERLAVSQRRPDLAVR 150

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
              + +R   +  A D   F+ ++  L + R A +A S   +L+ +F PDV+ Y  L  G
Sbjct: 151 LFLSLHR--SHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADG 208

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG---- 317
           WCR  + S A  V R M  +GI P   TY+I++    R GQ+  A D F +M + G    
Sbjct: 209 WCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDE 268

Query: 318 -CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
            C+P+ +++  ++     A + EK  +V+++M + GC     TYN LI   CK G +EDA
Sbjct: 269 SCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDA 328

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           + V + M+ KG  PN  T+ ++ R +   G ++   ++  +MK+  CEP   TYN+L++ 
Sbjct: 329 VTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRY 388

Query: 437 FATSKSTDMVLKLKKEMEEN-EVEPNVNTYRILITMYCGMGHWNN---AYKYIREMIEEK 492
                  +  L L ++M +  E  PN +TY I+I+         +   A + + EM++  
Sbjct: 389 LFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRG 448

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            L P   ++  VL  L   G    ++EL  K++
Sbjct: 449 YL-PRRFMFNRVLNGLMLTG----NQELSRKLL 476



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 15/350 (4%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L++ +++   K R    A   +  ++ R     V T++ L   + R    + A+     M
Sbjct: 167 LFNSLLDALSKSRHAGKAASLVRALEQRFTPDVV-TYNTLADGWCRVKDTSRALDVLRLM 225

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF------EPDVIVYTNLVRGWC 263
            E G AP K  ++I++    R  +   A  FF  +K +       +PDV+ YT +V G  
Sbjct: 226 VESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLG 285

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AG + +A +VF EM   G  P+V TY+ +I  +C+ G +  A  VF  ML  G  PN +
Sbjct: 286 VAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVV 345

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+R    A + ++ L++  +MK  GCE    TYN LI    ++G++E  + +   M
Sbjct: 346 TYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKM 405

Query: 384 VR-KGCNPNASTFNMIFRCI---SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + + C PN  T+N+I   +    +  D+  A RM  +M D    P    +N ++     
Sbjct: 406 SKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRVLNGLML 465

Query: 440 SKSTDMVLKLKKEMEE----NEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + + ++  KL +  E+          + +  +L+ +  GM      Y+ I
Sbjct: 466 TGNQELSRKLLRMQEKYRLFERAPTEIFSLSLLVQLQFGMIGSKAVYQMI 515



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           FN +   +SK      A  +   ++  +  P+ VTYN L   +   K T   L + + M 
Sbjct: 168 FNSLLDALSKSRHAGKAASLVRALEQ-RFTPDVVTYNTLADGWCRVKDTSRALDVLRLMV 226

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI-----EEKCLKPGSSVYEMVLQQLR 509
           E+ + P   TY I++  +   G   +A+ +  +M      +E C KP    Y  ++  L 
Sbjct: 227 ESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESC-KPDVVSYTTMVHGLG 285

Query: 510 RAGQLQKHEELVEKMVDRG 528
            AGQL+K  ++ ++M   G
Sbjct: 286 VAGQLEKARKVFDEMAKEG 304


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 180/369 (48%), Gaps = 2/369 (0%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R +D A      M    V   V T+++++R  V  G   + +    +ME+ G +P+ + +
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTY 245

Query: 222 SIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + +I   C+K++  EA +   ++       ++I Y +++ G C  G +SE   +  EM+ 
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRG 305

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G+ P+  TY+ +++  C+ G + +   + +EM+  G  PN +T+  L+    KA    +
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            +++++QM+  G   +  TY  LID  C+ G + +A KVL+ M+  G +P+  T+N +  
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
               LG V  A  +   M +    P+ V+Y+ ++  F   +      ++K+EM E  V P
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLP 485

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +  TY  LI   C       A+   REM+  + L P    Y  ++      G+L K   L
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMM-RRGLPPDEVTYTSLINAYCVDGELSKALRL 544

Query: 521 VEKMVDRGF 529
            ++MV RGF
Sbjct: 545 HDEMVQRGF 553



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 188/381 (49%), Gaps = 4/381 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++Y   + + G V Q DL     F+  M+   +   V T++ L+    +     EA+ 
Sbjct: 204 SPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMA 263

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M   G A + I+++ VI+ LC K R SE     + ++ K   PD + Y  LV G+C
Sbjct: 264 LLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFC 323

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + GN+ +   +  EM   G+ PNV TY+ +I+ +C+ G ++RA ++F +M   G  PN  
Sbjct: 324 KEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNER 383

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+    +     +  +V ++M   G     +TYN L+  +C  G++++A+ +L  M
Sbjct: 384 TYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGM 443

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V +G  P+  +++ +     +  ++  A +M  +M +    P+TVTY+ L+Q     +  
Sbjct: 444 VERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKL 503

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
                L +EM    + P+  TY  LI  YC  G  + A +   EM++   L P +  Y +
Sbjct: 504 VEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFL-PDNVTYSV 562

Query: 504 VLQQLRRAGQLQKHEELVEKM 524
           ++  L +  + +  + L+ K+
Sbjct: 563 LINGLNKKARTKVAKRLLLKL 583



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 175/350 (50%), Gaps = 7/350 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK-----RRASEAQS 239
            F ++V+   R G   +A+   +    +G AP  ++++ V+  L R+     R   +A+ 
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 240 FF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
            F D +++   P+V  Y  ++RG    G++ +     R+M+  GI PNV TY+ +IDA C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           +  ++  A  +   M   G   N I++N+++       R  +V ++  +M+  G   D +
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TYN L++  CK+G L   + +L+ MV KG +PN  T+  +  C+ K G+++ A  ++ +M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           +     PN  TY  L+  F      +   K+  EM  +   P+V TY  L+  YC +G  
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             A   +R M+ E+ L P    Y  V+    R  +L K  ++ E+MV++G
Sbjct: 434 QEAVGILRGMV-ERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 210/470 (44%), Gaps = 55/470 (11%)

Query: 95  SLGFSQISTAHSISPSTVRH--VIEKSCG---VRHGIPLLQVL-------------SFFN 136
            LGF +      ISP+ V +  +I+ SC    V+  + LL+ +             S  N
Sbjct: 226 GLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVIN 285

Query: 137 WVTARPEFVHSPDLYHEMIN-------------LAGKVRQFDLAWHFIDL--MKSRNVEI 181
            +  +       +L  EM               + G  ++ +L    + L  M  + +  
Sbjct: 286 GLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSP 345

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
            V T++ L+    +AG  + AV  F++M   G  P++  ++ +I   C+K   +EA    
Sbjct: 346 NVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVL 405

Query: 242 -DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            + +   F P V+ Y  LV G+C  G + EA  + R M   G+ P+V +YS VI   CR 
Sbjct: 406 SEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE 465

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            ++ +A  +  EM+E G  P+++T+++L++      +  +   ++ +M R G   D +TY
Sbjct: 466 RELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             LI+ +C DG+L  A+++ + MV++G  P+  T++++   ++K      A R+  K+  
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
            +  P+ VTYN L+                    EN       +   L+  +C  G  N 
Sbjct: 586 EESVPDDVTYNTLI--------------------ENCSNNEFKSVEGLVKGFCMKGLMNE 625

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           A +  + M++    KP +++Y +++    R G + K   L  ++    F 
Sbjct: 626 ADRVFKTMLQRNH-KPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFA 674



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 171/348 (49%), Gaps = 16/348 (4%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A+  +  M       +V T++ LV  Y   G   EAV     M E G  PD +++S VI+
Sbjct: 401 AYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIA 460

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR+R   +A    + + +K   PD + Y++L++G C    + EA  +FREM   G+ P
Sbjct: 461 GFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPP 520

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+ +I+A C  G++++A  +  EM++ G  P+++T++ L+    K +RT+   ++ 
Sbjct: 521 DEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLL 580

Query: 346 NQMKRLGCEADTITYNFLID-CH--------------CKDGKLEDAIKVLNSMVRKGCNP 390
            ++       D +TYN LI+ C               C  G + +A +V  +M+++   P
Sbjct: 581 LKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKP 640

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           NA+ +N++    S+ G+V+ A+ +Y +++      +TV    L++  A     D + +L 
Sbjct: 641 NAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLL 700

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
           + +  +    +    ++L+ +    G+ +     + EM ++  L  G 
Sbjct: 701 QNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGG 748



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 12/305 (3%)

Query: 237 AQSFFDSLKDKFE------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
             S F  L D F           V+  +V+   R G + +A  +       G  P V +Y
Sbjct: 111 GASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSY 170

Query: 291 SIVIDALCRCGQITR-----AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           + V+DAL R           A  VF +M+  G  PN  T+N ++R  V     EK L   
Sbjct: 171 NAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFM 230

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M++ G   + +TYN LID  CK  K+++A+ +L +M   G   N  ++N +   +   
Sbjct: 231 RKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGK 290

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G ++    +  +M+     P+ VTYN L+  F    +    L L  EM    + PNV TY
Sbjct: 291 GRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTY 350

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI   C  G+ + A +   +M   + L+P    Y  ++    + G + +  +++ +M+
Sbjct: 351 TTLINCMCKAGNLSRAVEIFDQM-RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 526 DRGFT 530
             GF+
Sbjct: 410 VSGFS 414



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 116/249 (46%), Gaps = 20/249 (8%)

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           V  FDL   F ++M+ R +     T++ L+  Y   G  ++A+   + M + G  PD + 
Sbjct: 504 VEAFDL---FREMMR-RGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVT 559

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYT---------------NLVRGWCR 264
           +S++I+ L +K R   A+     L  ++  PD + Y                 LV+G+C 
Sbjct: 560 YSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCM 619

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G ++EA+RVF+ M     +PN   Y+++I    R G + +A++++ E+       +++ 
Sbjct: 620 KGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVA 679

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
              L++   +    +++ ++   + R     D      L++ + K+G ++  + VL  M 
Sbjct: 680 VIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMA 739

Query: 385 RKGCNPNAS 393
           + G  P+  
Sbjct: 740 KDGLLPDGG 748


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 194/404 (48%), Gaps = 8/404 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L  F    AR     +   Y+ +IN   K  +        + +  R     V T++ L
Sbjct: 63  RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTL 122

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-- 247
           +    +AG   EA      M   GC P+ + +S++I+ LC+  R  EA+     +  K  
Sbjct: 123 IDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 182

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG--IQPNVYTYSIVIDALCRCGQIT 304
              P++I Y + + G C+    +EA  + R ++     + P+  T+S +ID LC+CGQ  
Sbjct: 183 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD 242

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A +   +M+  G  PN +T+N L+    KA + E+   +   M   G   D ITY+ L+
Sbjct: 243 EACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 300

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  CK  ++++A+++L+ M  +GC PN  TFN I   + K      A ++  ++ +    
Sbjct: 301 DAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLV 360

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+ VT+NIL+     + + +    L +EM    ++P+V T+  LI   C  G    A + 
Sbjct: 361 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQV-EAARD 419

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I +++    + P    Y +++  L ++G++++  E +E+MV  G
Sbjct: 420 ILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 185/386 (47%), Gaps = 14/386 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEI--TVDTFSILVRRYVRAGLAAEAVHAFNR 208
           Y  +IN   KV + D A   I  M  ++ ++   + T++  +    +  + AEA      
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 213

Query: 209 MEEYG--CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
           + +     +PD + FS +I  LC+  +  EA +  D +   + P+V+ Y  LV G C+A 
Sbjct: 214 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACND-DMIAGGYVPNVVTYNALVNGLCKAD 272

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            +  A  +   M   G+ P+V TYS+++DA C+  ++  A ++   M   GC PN +TFN
Sbjct: 273 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 332

Query: 327 NLMRVHVKASRT----EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +++    K+ R+    +  LQVYN+M       D +T+N LI   CK G  E A  +   
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVYNRMLV----PDKVTFNILIAGACKAGNFEQASALFEE 388

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           MV K   P+  TF  +   + K G V  A  +   M +L   PN VTYN+L+     S  
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +   +  +EM  +   P   TY  L+   C     ++A + + ++ +     P +  Y 
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKL-KSFGWDPDTVTYN 507

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
           +++  L ++G+ ++   ++E+MV +G
Sbjct: 508 ILVDGLWKSGKTEQAITVLEEMVGKG 533



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 36/300 (12%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   K  + + A   I+ M  + V   V T+S+LV  + +A    EA+   + M 
Sbjct: 261 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 320

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             GC P+ + F+ +I  LC+  R+ EA Q           PD + +  L+ G C+AGN  
Sbjct: 321 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFE 380

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF------------------- 310
           +A  +F EM    +QP+V T+  +ID LC+ GQ+  A D+                    
Sbjct: 381 QASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLV 440

Query: 311 ----------------AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
                            EM+  GC P S+T+ +L+    +ASRT+  LQ+ +++K  G +
Sbjct: 441 HGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWD 500

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            DT+TYN L+D   K GK E AI VL  MV KG  P++ TF   F  + + G++ G   +
Sbjct: 501 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMEL 560



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 145/317 (45%), Gaps = 38/317 (11%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TFS L+    + G   EA +  + M   G  P+ + ++ +++ LC+  +   A +  +S+
Sbjct: 227 TFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESM 284

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR---- 299
            DK   PDVI Y+ LV  +C+A  + EA  +   M   G  PNV T++ +ID LC+    
Sbjct: 285 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 344

Query: 300 -------------------------------CGQITRAHDVFAEMLEVGCEPNSITFNNL 328
                                           G   +A  +F EM+    +P+ +TF  L
Sbjct: 345 GEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGAL 404

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    KA + E    + + M  LG   + +TYN L+   CK G++E+  + L  MV  GC
Sbjct: 405 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGC 464

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P + T+  +   + +    + A ++  K+K    +P+TVTYNIL+     S  T+  + 
Sbjct: 465 VPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAIT 524

Query: 449 LKKEMEENEVEPNVNTY 465
           + +EM     +P+  T+
Sbjct: 525 VLEEMVGKGHQPDSFTF 541



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 44/348 (12%)

Query: 221 FSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           ++IV+  LCR    + A   F  +  +D   P ++ Y  ++ G C++  +     +F E+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              G  P+V TY+ +ID+LC+ G +  A  +   M   GC PN +T++ L+    K  R 
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 339 EKVLQVYNQMKRLGCEA---------------------------------------DTIT 359
           ++  ++  +M R  C+                                        DT+T
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           ++ LID  CK G+ ++A    + M+  G  PN  T+N +   + K   +  AH M   M 
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           D    P+ +TY++L+  F  +   D  L+L   M      PNV T+  +I   C      
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            A++ I   +  + L P    + +++    +AG  ++   L E+MV +
Sbjct: 346 EAFQ-IALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 392



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 140/281 (49%), Gaps = 8/281 (2%)

Query: 255 YTNLVRGWCRAGNISEAERVFR-EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           Y  +++  CRAG  + A  +FR EM   G+ P + TY+ +I+ LC+  ++    ++F E+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           ++ G  P+ +T+N L+    KA   E+  +++  M   GC  + +TY+ LI+  CK G++
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 374 EDAIKVLNSMVRKGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKMKD--LKCEPNTVT 429
           ++A +++  M RK C+  PN  T+N     + K      A  +   ++D  L+  P+TVT
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           ++ L+        TD       +M      PNV TY  L+   C       A+  I  M+
Sbjct: 228 FSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +K + P    Y +++    +A ++ +  EL+  M  RG T
Sbjct: 286 -DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 325



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 127/250 (50%), Gaps = 8/250 (3%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVF-AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           +V  Y+IV+ +LCR G+  RA ++F  EM   G  P  +T+N ++    K++     +++
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + ++ + G   D +TYN LID  CK G LE+A ++   M  +GC PN  T++++   + K
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 405 LGDVNGAHRMYGKMKDLKCE--PNTVTYNILMQMFATSKSTDMVLKLKKEMEENE--VEP 460
           +G ++ A  +  +M    C+  PN +TYN  +        T    +L + + +    V P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +  T+  LI   C  G  + A     +MI    + P    Y  ++  L +A ++++   +
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYV-PNVVTYNALVNGLCKADKMERAHAM 280

Query: 521 VEKMVDRGFT 530
           +E MVD+G T
Sbjct: 281 IESMVDKGVT 290



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 1/216 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+IL+    +AG   +A   F  M      PD + F  +I  LC+  +   A+   D +
Sbjct: 365 TFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLM 424

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +    P+V+ Y  LV G C++G I E      EM  +G  P   TY  ++ ALCR  + 
Sbjct: 425 GNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRT 484

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  + +++   G +P+++T+N L+    K+ +TE+ + V  +M   G + D+ T+   
Sbjct: 485 DDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 544

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
                + G L   +++L  ++ KG  P+A+T + I 
Sbjct: 545 FGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  +  +I+   K  Q + A   +DLM +  V   V T+++LV    ++G   E    
Sbjct: 396 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEF 455

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
              M   GC P+ + +  ++  LCR  R  +A      LK   ++PD + Y  LV G  +
Sbjct: 456 LEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWK 515

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G   +A  V  EM   G QP+ +T++     L R G +    ++   +L  G  P++ T
Sbjct: 516 SGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575

Query: 325 FNNLM 329
            ++++
Sbjct: 576 CSSIL 580


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 167/325 (51%), Gaps = 3/325 (0%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNLVRGWC 263
            +RM E GC PD  +++ VI  LC   R+ EA      +   D   PDV+ YT ++ G  
Sbjct: 224 LHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLF 283

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G IS+A  +F EM   G+ PNV TY+ ++ ALC+   + +A  V  +M +   +P+ +
Sbjct: 284 MEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEV 343

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  ++  +    R ++  +++ +M R G   D +T+N L+D  CK  + ++A ++ +S+
Sbjct: 344 TYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI 403

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  P+  +++++    +  G     + ++  M D     ++  +NIL+   A     
Sbjct: 404 ATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMM 463

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  L +  EM    V PNV TY  +I   C MG   +A + + +MI    LKP + VY  
Sbjct: 464 DEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG-LKPNTVVYHS 522

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++Q     G L K +ELV +M+D+G
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQG 547



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 181/380 (47%), Gaps = 3/380 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K R  D A   +  M   +++    T++ ++  Y   G   EA   F  M 
Sbjct: 310 YNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMT 369

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + F+ ++  LC+ +R+ EA   F S+  K  +PD+I Y+ L+ G+   G   
Sbjct: 370 REGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFV 429

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +   +F  M   GI  + + ++I+I+A  + G +  A  +F EM   G  PN +T+  ++
Sbjct: 430 DMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVI 489

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC- 388
               +  R    ++  +QM  +G + +T+ Y+ LI   C  G L  A ++++ M+ +G  
Sbjct: 490 AALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP 549

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN + F+ I   +   G V  A  ++  +  +   P+  T+N L+  +      D    
Sbjct: 550 RPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFG 609

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +   M     EP+V TY  LI  Y   G  ++     REM+ ++ +KP +  Y +VL  L
Sbjct: 610 VLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKR-VKPTTVTYSLVLDGL 668

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            RAG+    +++  +M++ G
Sbjct: 669 FRAGRTSAAKKMFHEMIESG 688



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 181/375 (48%), Gaps = 3/375 (0%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           +L G  R  +     + + K       V ++++++      G  ++A + FN M + G  
Sbjct: 245 SLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVV 304

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+ + ++ ++  LC+ R   +A+     + D   +PD + YT ++ G+   G   EA ++
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           F+EM   G+ P++ T++ ++D+LC+  +   A ++F  +   G +P+ I+++ L+  +  
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             R   +  +++ M   G  AD+  +N LI+ H K G +++A+ +   M  +G +PN  T
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +  +   + ++G +  A     +M  +  +PNTV Y+ L+Q F T        +L  EM 
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544

Query: 455 ENEV-EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           +  +  PN+  +  +I   C  G   NA + +  ++     +P    +  ++      G+
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNA-QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGK 603

Query: 514 LQKHEELVEKMVDRG 528
           + K   +++ MV  G
Sbjct: 604 MDKAFGVLDAMVSAG 618



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 174/388 (44%), Gaps = 12/388 (3%)

Query: 104 AHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
              +SP+ V +  VI   C +      ++ LS    +  +P  V    +YH +I   G  
Sbjct: 475 GQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTV----VYHSLIQ--GFC 528

Query: 162 RQFDL--AWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
              DL  A   +  M  + +    +  FS ++      G    A   FN +   G  PD 
Sbjct: 529 THGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDI 588

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             F+ +I   C   +  +A    D++     EPDV+ Y+ L+ G+ ++G I +   +FRE
Sbjct: 589 FTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFRE 648

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    ++P   TYS+V+D L R G+ + A  +F EM+E G   +  T+  +++   + + 
Sbjct: 649 MLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNC 708

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
           T++ + +++++  +  + +    N +I    K  + E+A  +  S+   G  PNAST+ +
Sbjct: 709 TDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGV 768

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + K G V  A  M+  M+   C P++   N +++M               +++   
Sbjct: 769 MIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTI 828

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +    +T  +LI+++   G +    K++
Sbjct: 829 ISLEASTTSLLISLFASKGRYREQIKFL 856



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 126/259 (48%), Gaps = 4/259 (1%)

Query: 273 RVFREMKMAGIQP-NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           R+ RE     + P  V+TY I++D  CR  +       FA +L  G   + I  N  ++ 
Sbjct: 150 RICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKC 209

Query: 332 HVKASRTEKVLQ-VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCN 389
              A RT++ L  + ++M  LGC  D  +YN +I   C   + ++A+ +L  M +  GC+
Sbjct: 210 LCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCS 269

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  ++ M+   +   G+++ A  ++ +M      PN VTYN ++     +++ D    +
Sbjct: 270 PDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELV 329

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            ++M +N ++P+  TY  +I  Y  +G W  A K  +EM  E  L P    +  ++  L 
Sbjct: 330 LRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREG-LIPDIVTFNSLMDSLC 388

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  + ++  E+   +  +G
Sbjct: 389 KHKRSKEAAEIFHSIATKG 407


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 182/415 (43%), Gaps = 71/415 (17%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  ++   GK R  +     ++ M+S  ++  + T++I +R   RAG   EA     RME
Sbjct: 232 FSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRME 291

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK------------------------- 245
           + GC PD + ++++I  LC   +  +A   F  +K                         
Sbjct: 292 DDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLG 351

Query: 246 -----------DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                      D + PDVI +T LV   C+AGNI EA  +   M+  G+ PN++TY+ +I
Sbjct: 352 RVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ----------- 343
             L R  ++  A D+F  M  +G  P + T+   +  + K+ R++K L+           
Sbjct: 412 SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA 471

Query: 344 ------------------------VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                                   ++N++K  G   D++TYN ++ C+ K G++++AI++
Sbjct: 472 PNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIEL 531

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L+ M    C P+    N +   + K G V+ A +M+ ++KD+K  P  VTYN L+     
Sbjct: 532 LSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGK 591

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                  ++L   M  N   PN  T+  ++   C     + A K + +M    C+
Sbjct: 592 EGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCM 646



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 181/367 (49%), Gaps = 5/367 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           G +RQ   A+     M+     +   +++ L+   +++GL  EA+  + RM   G  P  
Sbjct: 173 GGLRQTPFAF---GKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSL 229

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             FS ++    ++R     +S  + ++    +P++  YT  +R   RAG I EA R+ + 
Sbjct: 230 KTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKR 289

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+  G  P+V TY+++IDALC  G++  A ++F +M     +P+ +T+  ++        
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGD 349

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             +V + +++M+  G   D IT+  L++  CK G +++A  +L+ M ++G  PN  T+N 
Sbjct: 350 LGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNT 409

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + ++  ++ A  ++  M+ L   P   TY + +  +  S  +D  L+  ++M+   
Sbjct: 410 LISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG 469

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + PN+      +     MG    A K I   ++   L P S  Y M+++   +AGQ+ + 
Sbjct: 470 IAPNIVACNASLYSLAEMGRLREA-KVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEA 528

Query: 518 EELVEKM 524
            EL+  M
Sbjct: 529 IELLSDM 535



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 174/347 (50%), Gaps = 4/347 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           ++PD+  +  ++N   K    D A+H +D+M+ + V   + T++ L+   +R     +A+
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             FN ME  G  P    + + I    +  R+ +A   F+ +K +   P+++     +   
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
              G + EA+ +F  +K  G+ P+  TY++++    + GQ+  A ++ ++M E  CEP+ 
Sbjct: 485 AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDI 544

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           I  N+L+    KA R ++  +++ ++K +      +TYN LI    K+G+++ A+++  S
Sbjct: 545 IVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC PN  TFN I  C+ K  +V+ A +M  KM  + C P+ +T+N ++      K 
Sbjct: 605 MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
               + L  +M++  + P+  T   L+      G   +A+K   + +
Sbjct: 665 VSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFV 710



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 155/302 (51%), Gaps = 1/302 (0%)

Query: 165  DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
            ++AW+    MK+      V T+++L+  + ++G   E    + +M    C P+ I  +I+
Sbjct: 807  EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNII 866

Query: 225  ISILCRKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
            I+ L +     +A   F+D +   F P    Y  L+ G  ++G + EA+ +F EM   G 
Sbjct: 867  IANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGC 926

Query: 284  QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            +PN   Y+I+I+   + G +  A ++F  M+  G  P+  ++ +L+    +A R +  L 
Sbjct: 927  RPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALH 986

Query: 344  VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
             + ++K+ G   D+I YN +ID   +  ++E+A+ + + M  +G NP+  T+N +   + 
Sbjct: 987  YFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLG 1046

Query: 404  KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
              G V  A ++Y +++ +  EPN  TYN L++ ++ S ++D    + K M      PN  
Sbjct: 1047 VAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTG 1106

Query: 464  TY 465
            T+
Sbjct: 1107 TF 1108



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 158/325 (48%), Gaps = 1/325 (0%)

Query: 170  FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            FI   K   V+ T+++++ L+  ++       A + F  M+  GCAPD   +++++    
Sbjct: 777  FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHG 836

Query: 230  RKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            +  + +E    ++ +     +P+ I +  ++    ++ ++ +A  +F ++      P   
Sbjct: 837  KSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPC 896

Query: 289  TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            TY  ++D L + G++  A ++F EM++ GC PN+  +N L+    K        +++ +M
Sbjct: 897  TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRM 956

Query: 349  KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             R G   D  +Y  L+ C C+ G+++DA+     + + G   ++  +N++   + +   +
Sbjct: 957  VREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRI 1016

Query: 409  NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
              A  +Y +M+     P+  TYN L+     +   +   KL +E++   +EPNV TY  L
Sbjct: 1017 EEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNAL 1076

Query: 469  ITMYCGMGHWNNAYKYIREMIEEKC 493
            I  Y   G+ ++AY   + M+   C
Sbjct: 1077 IRGYSMSGNSDSAYAVYKRMMVGGC 1101



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/483 (22%), Positives = 192/483 (39%), Gaps = 74/483 (15%)

Query: 104 AHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY--HEMINLAGKV 161
           ++ ++P +V + +   C  + G    QV      ++   E    PD+   + +IN   K 
Sbjct: 502 SNGLAPDSVTYNMMMKCYSKAG----QVDEAIELLSDMSENQCEPDIIVINSLINTLYKA 557

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
            + D AW     +K   +  TV T++ L+    + G    A+  F  M   GC P+ I F
Sbjct: 558 GRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITF 617

Query: 222 SIVISILCR-----------------------------------KRRASEAQSFFDSLKD 246
           + ++  LC+                                   ++R S+A   F  +K 
Sbjct: 618 NTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK 677

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEA---------------ERVFREMKMAGIQPNVYT-Y 290
              PD +    L+ G  + G + +A               +R F E  M GI     T  
Sbjct: 678 MLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEK 737

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I+      CG++ +   V   +++V C+            H +A   + V   +   K 
Sbjct: 738 TILFGDRLVCGRVCKDGSVLMPIIKVLCK------------HKQALVAQSVFIRFT--KE 783

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
           LG +    +YNFLI+        E A  +   M   GC P+  T+N++     K G +N 
Sbjct: 784 LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              +Y +M    C+PNT+T+NI++     S S D  L L  ++   +  P   TY  L+ 
Sbjct: 844 LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
                G    A +   EM++  C +P +++Y +++    + G +    EL ++MV  G  
Sbjct: 904 GLLKSGRLEEAKELFEEMVDYGC-RPNNAIYNILINGFGKTGDVNTACELFKRMVREGI- 961

Query: 531 ARP 533
            RP
Sbjct: 962 -RP 963



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 2/306 (0%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++ IL   RR  +    F+ ++++  + D+  Y  + +G    G + +    F +M+ AG
Sbjct: 130 MLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAG 189

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
              N Y+Y+ +I  L + G    A +++  M+  G +P+  TF+ LM    K   TE V 
Sbjct: 190 FHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVK 249

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            +  +M+ LG + +  TY   I    + G++++A +++  M   GC P+  T+ ++   +
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
              G ++ A  ++ KMK    +P+ VTY  ++  F+       V +   EME +   P+V
Sbjct: 310 CTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDV 369

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            T+ IL+   C  G+ + A+  +  M ++  L P    Y  ++  L R  +L    +L  
Sbjct: 370 ITFTILVNALCKAGNIDEAFHLLDVMRKQGVL-PNLHTYNTLISGLLRVNRLDDALDLFN 428

Query: 523 KMVDRG 528
            M   G
Sbjct: 429 NMETLG 434



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 94/180 (52%), Gaps = 1/180 (0%)

Query: 150  LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            +Y+ +IN  GK    + A      M    +   + +++ LV     AG   +A+H F ++
Sbjct: 932  IYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKL 991

Query: 210  EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            ++ G   D IA++++I  L R  R  EA + +D ++ +   PD+  Y +L+     AG +
Sbjct: 992  KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMV 1051

Query: 269  SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             +A +++ E++  G++PNV+TY+ +I      G    A+ V+  M+  GC PN+ TF  L
Sbjct: 1052 EQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 182/362 (50%), Gaps = 2/362 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM +  +      F+I++  Y +  +  EA+H F+RM ++G +PD + + I+I  LC
Sbjct: 431 LLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALC 490

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  R  +A   F+ +  D   P+ +V+ +LV G C      +AE +F EM   G++PNV 
Sbjct: 491 KLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVV 550

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            ++ ++  LC  GQ+  A  +   M  VG  PN I++N L+  H  A RT++  Q+ + M
Sbjct: 551 FFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVM 610

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             +G + D I+Y+ L+  +CK G++++A  +   M+RKG  P A T++ I + +      
Sbjct: 611 VSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRF 670

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +Y  M     + +  TYNI++     +   D   K+ + +   ++ PN+ T+ I+
Sbjct: 671 SEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIM 730

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I +    G   +A       I    L P    Y ++++ + + G L + + L   M   G
Sbjct: 731 IDVLFKGGRKKDAMDLFAS-IPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789

Query: 529 FT 530
            T
Sbjct: 790 CT 791



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 174/352 (49%), Gaps = 4/352 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ ++    +A     A      M + G   D + +S +I  LC+ +    A+    
Sbjct: 199 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQ 258

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            + DK  +PDV+ Y  ++ G C+A  +  AE V + M   G++P+V TY+ +ID LC+  
Sbjct: 259 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ 318

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            + RA  V   M++   +P+  T+N L+  ++     ++V++   +M   G + D +TY+
Sbjct: 319 AVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYS 378

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+D  CK+GK  +A K+   M+RKG  PN + + ++    +  G +     +   M   
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN   +NI++  +A     D  + +   M ++ + P+V TY ILI   C +G  ++A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
                +MI +  + P S V+  ++  L    + +K EEL  +M D+G   RP
Sbjct: 499 VLKFNQMINDG-VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG--VRP 547



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 189/449 (42%), Gaps = 72/449 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K +  D A   +  M  + V+  V T++ ++    +A     A      M 
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMI 296

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD + ++ +I  LC+ +    A      + DK  +PD+  Y  L+ G+   G   
Sbjct: 297 DKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWK 356

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF------------------- 310
           E  R   EM   G+ P+V TYS+++D LC+ G+ T A  +F                   
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416

Query: 311 ------------AEMLEV----GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
                        ++L++    G  PN+  FN ++  + K +  ++ + ++++M + G  
Sbjct: 417 HGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLS 476

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL--------- 405
            D +TY  LID  CK G+++DA+   N M+  G  PN+  FN +   +  +         
Sbjct: 477 PDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEEL 536

Query: 406 --------------------------GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
                                     G V  A R+   M+ +   PN ++YN L+     
Sbjct: 537 FFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCL 596

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +  TD   +L   M    ++P++ +Y  L+  YC  G  +NAY   REM+  K + PG+ 
Sbjct: 597 AGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREML-RKGVTPGAV 655

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y  +LQ L    +  + +EL   M+  G
Sbjct: 656 TYSTILQGLFHTRRFSEAKELYLNMIKSG 684



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 5/329 (1%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD----KFEPDVIVYTNLVRG 261
             RM E+GC P+ ++ + ++  LC ++R  EA     ++ +       P+V+ Y  ++ G
Sbjct: 149 LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG 208

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+A  +  AE V + M   G++ +V TYS +ID LC+   + RA  V   M++ G +P+
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 268

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T+N ++    KA   ++   V   M   G + D +TYN +ID  CK   ++ A  VL 
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M+ K   P+  T+N +       G+     R   +M     +P+ VTY++L+     + 
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNG 388

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                 K+   M    ++PNV  Y IL+  Y   G   +    +  M+    + P + ++
Sbjct: 389 KCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG-ISPNNYIF 447

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +VL    +   + +   +  +M   G +
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLS 476



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 161/382 (42%), Gaps = 38/382 (9%)

Query: 147 SPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP+ Y   I L    ++   D A H    M    +   V T+ IL+    + G   +AV 
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----------------- 247
            FN+M   G  P+ + F+ ++  LC   R  +A+  F  + D+                 
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560

Query: 248 -------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
                                P+VI Y  L+ G C AG   EA ++   M   G++P++ 
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +Y  ++   C+ G+I  A+ +F EML  G  P ++T++ +++      R  +  ++Y  M
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            + G + D  TYN +++  CK   +++A K+  S+  K   PN  TF ++   + K G  
Sbjct: 681 IKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A  ++  +      PN VTY I+M+        D    L   ME++   P+      +
Sbjct: 741 KDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAI 800

Query: 469 ITMYCGMGHWNNAYKYIREMIE 490
           I    G G    A  Y+ ++ E
Sbjct: 801 IRSLLGRGEIMRAGAYLSKIDE 822



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 12/303 (3%)

Query: 236 EAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAE---RVFREMKMA---GIQPNVY 288
           +A   FD L     P  V  + +L+    RA   S +E    +F  M  A    ++P++ 
Sbjct: 32  DALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLC 91

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV-YNQ 347
           TYSI+    CR G+I      F  +L+ G   N +  N L+     A R ++ + +   +
Sbjct: 92  TYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRR 151

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG---CNPNASTFNMIFRCISK 404
           M   GC  + ++ N L+   C + ++E+A+++L++M   G   C PN  T+N I   + K
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
              V+ A  +   M D   + + VTY+ ++     +++ D    + + M +  V+P+V T
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  +I   C     + A   ++ MI +K +KP    Y  ++  L +A  + + + +++ M
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMI-DKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 525 VDR 527
           +D+
Sbjct: 331 IDK 333


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 186/417 (44%), Gaps = 35/417 (8%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD Y     + G  R  Q D+A    D M  R     V +++ L+     AG   EAV  
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 206 FN-------------------------------RMEEYGCAPDKIAFSIVISILCRKRRA 234
           F                                RM+E G  P   A++ V+   CR+R+A
Sbjct: 68  FGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 127

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA+     + +K   P V+  T ++  +C+ G +S+A RV   MK+ G +PNV+TY+ +
Sbjct: 128 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 187

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           +   C  G++ +A  +  +M   G  P+++T+N L+R        E   ++   M+  G 
Sbjct: 188 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 247

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
            AD  TYN LI+  CKDG+ + A  + +S+  +G  PNA TFN +   + K G  + A +
Sbjct: 248 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 307

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
              KM    C P+T TY+  ++     K +   L    EM + +V+P+   Y I+I    
Sbjct: 308 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 367

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              ++    +   EM+   C  P    Y   ++     G+L + E ++ +M   G T
Sbjct: 368 KERNYGLVARTWGEMVSSGC-NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 423



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 151/351 (43%), Gaps = 33/351 (9%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
           M   G  PD   F+ +I   CR  +   A+  FD +  + F  DV+ Y  L+ G C AG 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 268 ISEAERVF-------------------------------REMKMAGIQPNVYTYSIVIDA 296
           I EA  +F                               R MK  G +P+   Y+ V+D 
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            CR  +   A ++  EM E G  P  +T   ++  + K  R    L+V   MK  GC+ +
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TYN L+   C +GK+  A+ +LN M   G NP+A T+N++ R     G +  A R+  
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M+      +  TYN L+        TD    L   +E   ++PN  T+  LI   C  G
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
             + A+K++ +M+   C  P +  Y   ++ L +    Q+    + +M+ +
Sbjct: 301 KADIAWKFLEKMVSAGC-TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 350



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 182/388 (46%), Gaps = 9/388 (2%)

Query: 124 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 183
            G+ +L+ +    W   RP    S   Y  +++   + R+   A   +  M  + +   V
Sbjct: 94  EGLLMLRRMKELGW---RP----STRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCV 146

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
            T + ++  Y + G  ++A+     M+  GC P+   ++ ++   C + +  +A +  + 
Sbjct: 147 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNK 206

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           ++     PD + Y  L+RG C  G+I  A R+ R M+  G+  + YTY+ +I+ALC+ G+
Sbjct: 207 MRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 266

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
             +A  +F  +   G +PN++TFN+L+    K+ + +   +   +M   GC  DT TY+ 
Sbjct: 267 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSS 326

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
            I+  CK    ++ +  +  M++K   P+   + ++   + K  +     R +G+M    
Sbjct: 327 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 386

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C P+ VTY   M+ +      +    +  EM +N V  +   Y  L+  +  +G  ++A 
Sbjct: 387 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 446

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRR 510
             +++M     + P    Y ++L+ L R
Sbjct: 447 SILKQMTSVASV-PNQFTYFILLRHLVR 473



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 192/469 (40%), Gaps = 70/469 (14%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   VI   C        L+VL        +P       L     N  GKV +   A   
Sbjct: 148 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN-EGKVHK---AMTL 203

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           ++ M++  V     T+++L+R     G    A      ME  G   D+  ++ +I+ LC+
Sbjct: 204 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 263

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             R  +A S FDSL+ +  +P+ + + +L+ G C++G    A +   +M  AG  P+ YT
Sbjct: 264 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 323

Query: 290 YSIVIDALCRC--------------------------------------GQITRAHDVFA 311
           YS  I+ LC+                                       G + R    + 
Sbjct: 324 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR---TWG 380

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM+  GC P+ +T+   MR +    R  +   V  +M + G   DT+ YN L+D H   G
Sbjct: 381 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 440

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK--------------------LGDVNGA 411
           + + A+ +L  M      PN  T+ ++ R + +                    L DV G 
Sbjct: 441 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG- 499

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++  MK  +  PN+ TY+ +++ F+    T+    L   M+E+ +  N + Y  L+T 
Sbjct: 500 --LFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTC 557

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +C    + +A+  +  MI+   + P    Y+ +L  L   GQ  K +E+
Sbjct: 558 FCKSKRYLDAWVLVCSMIQHGFI-PQLMSYQHLLSGLICEGQTDKAKEI 605



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 5/286 (1%)

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           ++  + PD   + +L+ G+CR   +  A  +F +M + G   +V +Y+ +I+ LC  G+I
Sbjct: 2   VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 61

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A ++F EM     +P+   +  L++    A R E+ L +  +MK LG    T  Y  +
Sbjct: 62  DEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 117

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D  C++ K ++A ++L  M  KG  P   T   +     K G ++ A R+   MK   C
Sbjct: 118 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 177

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +PN  TYN L+Q F         + L  +M    V P+  TY +LI   C  GH  +A++
Sbjct: 178 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 237

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +R ++E   L      Y  ++  L + G+  +   L + +  RG 
Sbjct: 238 LLR-LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGI 282



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/371 (19%), Positives = 142/371 (38%), Gaps = 53/371 (14%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K  + D+AW F++ M S        T+S  +    +   + E +     M 
Sbjct: 289 FNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 348

Query: 211 EYGCAPDKIAFSIVISILCRKRRAS-EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +    P  + ++IVI  L ++R     A+++ + +     PDV+ YT  +R +C  G ++
Sbjct: 349 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 408

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE V  EM   G+  +   Y+ ++D     GQ   A  +  +M  V   PN  T+  L+
Sbjct: 409 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 468

Query: 330 RVHVKA----------------------------------------------------SR 337
           R  V+                                                      R
Sbjct: 469 RHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGR 528

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
           TE+   + + MK      +   Y  L+ C CK  +  DA  ++ SM++ G  P   ++  
Sbjct: 529 TEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQH 588

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +   G  + A  ++   +     P+ + + +++        +D+  ++   +E   
Sbjct: 589 LLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMN 648

Query: 458 VEPNVNTYRIL 468
             P+  TY +L
Sbjct: 649 CRPSHQTYAML 659



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 82/178 (46%), Gaps = 2/178 (1%)

Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
           GV   I L  V   F+ V  + EF+ +   Y  ++    +  + + A   + LMK  ++ 
Sbjct: 487 GVWKAIELTDVFGLFD-VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 545

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS-ILCRKRRASEAQS 239
           +  D ++ LV  + ++    +A      M ++G  P  +++  ++S ++C  +     + 
Sbjct: 546 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 605

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           F +S    + PD IV+  ++ G  + G+   +  +   ++    +P+  TY+++ + L
Sbjct: 606 FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 186/382 (48%), Gaps = 2/382 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++ +  K  Q  LA   +  M+ R +++    +SI++    + G    A + FN ME
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G   D I ++ +I   C   R  +      D +K K  PDV+ ++ L+  + + G + 
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE + +EM   GI P+  TY+ +ID  C+  Q+ +A+ +   M+  GC PN  TFN L+
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA+  +  L+++ +M   G  ADT+TYN LI   C+ GKLE A ++   MV +   
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  ++ ++   +   G+   A  ++ K++  K E +   YNI++     +   D    L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+P+V TY I+I   C  G  + A    R+M EE    P    Y ++++   
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM-EEDGHSPNGCTYNILIRAHL 573

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
             G   K  +L+E++   GF+ 
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSV 595



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 185/372 (49%), Gaps = 2/372 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   + R+  LA+  +  +     E    TFS L+      G  +EA+   +RM E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P  I  + +++ LC   + S+A    D + +  F+P+ + Y  +++  C++G  + A 
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + R+M+   I+ +   YSI+ID LC+ G +  A ++F EM   G + + I +  L+R  
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
             A R +   ++   M +     D + ++ LIDC  K+GKL +A ++   M+++G +P+ 
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+  +     K   ++ A+ M   M    C PN  T+NIL+  +  +   D  L+L ++
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M    V  +  TY  LI  +C +G    A +  +EM+  + ++P    Y+++L  L   G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNG 471

Query: 513 QLQKHEELVEKM 524
           + +K  E+ EK+
Sbjct: 472 EPEKALEIFEKI 483



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 149/281 (53%), Gaps = 1/281 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +I ++ L     R         + ++M++ GI  N+YT SI+I+  CRC +++ A   
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +++++G EP+++TF+ L+       R  + L++ ++M  +G +   IT N L++  C 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +GK+ DA+ +++ MV  G  PN  T+  + + + K G    A  +  KM++ K + + V 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+I++       S D    L  EME    + ++  Y  LI  +C  G W++  K +R+MI
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           + K + P    +  ++    + G+L++ EEL ++M+ RG +
Sbjct: 310 KRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 180/415 (43%), Gaps = 57/415 (13%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           DL+ EM     + R  D +  F  + +++  ++ +D                       +
Sbjct: 58  DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC--------------------KQ 97

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           ME  G A +    SI+I+  CR R+ S A S    + K  +EPD + ++ L+ G C  G 
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +SEA  +   M   G +P + T + +++ LC  G+++ A  +   M+E G +PN +T+  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL-------------- 373
           +++V  K+ +T   +++  +M+    + D + Y+ +ID  CKDG L              
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 374 ---------------------EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                                +D  K+L  M+++   P+   F+ +  C  K G +  A 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++ +M      P+TVTY  L+  F      D    +   M      PN+ T+ ILI  Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           C     ++  +  R+M   + +   +  Y  ++Q     G+L+  +EL ++MV R
Sbjct: 398 CKANLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 152/310 (49%), Gaps = 1/310 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           ++D     +  M  R +   V  FS L+  +V+ G   EA      M + G +PD + ++
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I   C++ +  +A    D +  K   P++  +  L+ G+C+A  I +   +FR+M + 
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+  +  TY+ +I   C  G++  A ++F EM+     P+ +++  L+         EK 
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+++ ++++   E D   YN +I   C   K++DA  +  S+  KG  P+  T+N++   
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K G ++ A  ++ KM++    PN  TYNIL++            KL +E++      +
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596

Query: 462 VNTYRILITM 471
            +T ++++ M
Sbjct: 597 ASTVKMVVDM 606



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 133/284 (46%), Gaps = 4/284 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+R+   A      M  R +     T++ L+  + +     +A H  + M   GC P+ 
Sbjct: 331 GKLRE---AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             F+I+I+  C+     +    F  +  +    D + Y  L++G+C  G +  A+ +F+E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    ++P++ +Y I++D LC  G+  +A ++F ++ +   E +   +N ++     AS+
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +    ++  +   G + D  TYN +I   CK G L +A  +   M   G +PN  T+N+
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
           + R     GD   + ++  ++K      +  T  +++ M +  +
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 87/222 (39%), Gaps = 36/222 (16%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A D+F EM      P  I F+ L  V  +  + + VL +  QM+  G   +  T + +I+
Sbjct: 56  AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           C C+  KL  A   +                                   GK+  L  EP
Sbjct: 116 CCCRCRKLSLAFSAM-----------------------------------GKIIKLGYEP 140

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +TVT++ L+            L+L   M E   +P + T   L+   C  G  ++A   I
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
             M+E    +P    Y  VL+ + ++GQ     EL+ KM +R
Sbjct: 201 DRMVETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 187/385 (48%), Gaps = 5/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K R  D A   +  M  + VE    T++ ++  Y  +G   E+   
Sbjct: 297 PDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKM 356

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
           F +M   G  P  + F+  +S LC+  R+ +A+  F  +  K   PD++ Y+ L+ G+  
Sbjct: 357 FRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT 416

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G  ++   +F  M   GI  N + ++I+I A  + G +  A  VF EM   G  P+ +T
Sbjct: 417 EGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVT 476

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    +  R    ++ ++QM  +G E +T+ Y+ LI   C  G L  A ++++ M+
Sbjct: 477 YSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMM 536

Query: 385 RKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            KG   PN   F+ I   +   G V  AH ++  +  +   P  VT+N L+  +      
Sbjct: 537 SKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 596

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +    +   M    +EP+V TY  L++ YC  G  ++     REM+ +K +KP +  Y +
Sbjct: 597 EKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKK-VKPTTVTYSI 655

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           VL  L  AG+    +++  +M+D G
Sbjct: 656 VLDGLFHAGRTSAAKKMFHEMIDSG 680



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 203/417 (48%), Gaps = 22/417 (5%)

Query: 131 VLSFFNWVT-------ARPEFVHSPDLYHEMINLAGKVRQFDLA-WHFIDLMKS--RNVE 180
           VL+ FN +          P  VH+   Y  +++   + R+ DL    F  L+++  R   
Sbjct: 135 VLALFNRICREEAGPRVAPLSVHT---YGILMDCCCRARRPDLGPAFFARLLRAGLRTRT 191

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           I  +TF   ++    A    EAV    +RM + GC P+ I+++ VI  LC   R+ EA  
Sbjct: 192 IEANTF---LKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALD 248

Query: 240 FFDSLK---DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
               +     +  PDV+ +  ++ G+ + G +S+A  +  EM   G++P+V TY+ ++DA
Sbjct: 249 MVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDA 308

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LC+   + +A  V  +M++ G EP+ +T+  ++  +  +   ++  +++ +M   G    
Sbjct: 309 LCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPG 368

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            +T+N  +   CK G+ +DA ++   M  KG  P+  +++++    +  G     + ++ 
Sbjct: 369 IVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFH 428

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M D     N   +NIL+   A     D  + +  EM+   V P+V TY  LI+ +C MG
Sbjct: 429 SMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMG 488

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
              +A +   +MI    L+P + VY  ++      G L K +ELV +M+ +G   RP
Sbjct: 489 RLADAMEKFSQMISIG-LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGI-PRP 543



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 157/331 (47%), Gaps = 3/331 (0%)

Query: 201 EAVHAFNRMEEYG--CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTN 257
           EA+    RM + G  C+PD ++F+ VI    ++   S+A +  + +  K  EPDV+ Y +
Sbjct: 245 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNS 304

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           +V   C+A  + +AE V R+M   G++P+  TY+ +I      G    +  +F +M   G
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P  +TFN+ M    K  R++   +++  M   G   D ++Y+ L+  +  +G+  D  
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            + +SM  KG   N   FN++    +K G ++ A  ++ +M+     P+ VTY+ L+  F
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                    ++   +M    +EPN   Y  LI  +C  G    A + + EM+ +   +P 
Sbjct: 485 CRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPN 544

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +  ++  L   G++    ++   ++  G
Sbjct: 545 IVFFSSIIHSLCNEGRVMDAHDVFNLVIHIG 575



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 186/422 (44%), Gaps = 43/422 (10%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVR 191
            F ++T +    H PDL    I L G   +   A   +    M  + +      F+IL+ 
Sbjct: 391 IFQYMTTKG---HMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILIS 447

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEP 250
            + + G+  EA+  F  M+  G  PD + +S +IS  CR  R ++A + F   +    EP
Sbjct: 448 AHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEP 507

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRAHDV 309
           + +VY +L+ G+C  G++ +A+ +  EM   GI +PN+  +S +I +LC  G++  AHDV
Sbjct: 508 NTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDV 567

Query: 310 F-----------------------------------AEMLEVGCEPNSITFNNLMRVHVK 334
           F                                     M+ VG EP+ +T+N L+  + K
Sbjct: 568 FNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCK 627

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           + + +  L ++ +M     +  T+TY+ ++D     G+   A K+ + M+  G   +  T
Sbjct: 628 SGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDT 687

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           + ++ + + +    + A  ++ K+  + C+ +    N ++      +  +    L   + 
Sbjct: 688 YKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAIS 747

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            + + PNV+TY ++I      G    A      M +  C  P S +   +++ L + G +
Sbjct: 748 TSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC-APSSRLLNDIIRMLLQKGDI 806

Query: 515 QK 516
            K
Sbjct: 807 VK 808



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 157/340 (46%), Gaps = 6/340 (1%)

Query: 150 LYHEMINLAGKVRQFDL--AWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHAF 206
           +YH +I+  G     DL  A   +  M S+ +    +  FS ++      G   +A   F
Sbjct: 511 VYHSLIH--GFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVF 568

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
           N +   G  P  + F+ +I   C   +  +A    D++     EPDV+ Y  LV G+C++
Sbjct: 569 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKS 628

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G I +   +FREM    ++P   TYSIV+D L   G+ + A  +F EM++ G   +  T+
Sbjct: 629 GKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTY 688

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             L++   +   T++ + +++++  + C+ D    N +I+   K  + E+A  +  ++  
Sbjct: 689 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAIST 748

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G  PN ST+ ++   + K G V  A  M+  M+   C P++   N +++M         
Sbjct: 749 SGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVK 808

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
                 +++   +    +T  +L++++   G      K++
Sbjct: 809 AGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 848



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/411 (20%), Positives = 170/411 (41%), Gaps = 45/411 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I+   K    D A      M+ + V   V T+S L+  + R G  A+A+  F++M 
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 211 EYGCAPDKIA------------------------------------FSIVISILCRKRRA 234
             G  P+ +                                     FS +I  LC + R 
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 235 SEAQSFFD---SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
            +A   F+    + D+  P ++ + +L+ G+C  G + +A  V   M   GI+P+V TY+
Sbjct: 562 MDAHDVFNLVIHIGDR--PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYN 619

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            ++   C+ G+I     +F EML    +P ++T++ ++     A RT    +++++M   
Sbjct: 620 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDS 679

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G   D  TY  L+   C++   ++AI + + +    C  + +  N +   + K+     A
Sbjct: 680 GTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEA 739

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           + ++  +      PN  TY +++       S +    +   ME++   P+      +I M
Sbjct: 740 NDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 799

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
               G    A  Y+ + ++   +   +S   +++      G   KH E ++
Sbjct: 800 LLQKGDIVKAGYYMSK-VDGTIISLEASTTSLLMSLFSSKG---KHREQIK 846


>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 225/479 (46%), Gaps = 61/479 (12%)

Query: 102 STAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           S   S+S +TV   +      RH     +   FFNW+  +  F H+P  Y  M+ + G+ 
Sbjct: 78  SFTTSLSKTTVFQTL------RHIKVPTKAFLFFNWIHEKG-FSHNPQTYFIMLEILGRE 130

Query: 162 RQFDLAWHFI-DLMKSRNVEITVDT--FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           +  ++A +F+  + K  N E+ ++   F+ L+R Y  AGL  E+V  F  M+  G +P  
Sbjct: 131 KNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGV 190

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFR 276
           + F+ V+ +L ++ R + A+  +D +   +  +PD   Y  L+RG+C+   + E    F+
Sbjct: 191 VTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFK 250

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAH----------------------------- 307
           EM      P+V TY+ ++D LCR G+I  AH                             
Sbjct: 251 EMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCR 310

Query: 308 --------DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA-DTI 358
                   D+  EM   G +PN +T+N L++   +A + +K+ ++  QMK  G    D  
Sbjct: 311 KQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDAC 370

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           T+N LI+ HC  G L++A KV  +M +   + ++++++++ R + + GD   A  ++ ++
Sbjct: 371 TFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDEL 430

Query: 419 KDLKC-------EPNTVTYNILMQMFATSKSTDMVLK-LKKEMEENEVEPNVNTYRILIT 470
            + +        +P   +Y  + Q    +  T    + L++ M+    +P   +Y+I+I 
Sbjct: 431 FEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDP--LSYQIVIL 488

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +C  G + N Y  +  M+    L P   +Y+ ++    R  +    +E +EKM+   +
Sbjct: 489 GHCKEGSYENGYGLLVWMLRRDFL-PDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSY 546



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 177/367 (48%), Gaps = 13/367 (3%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           +++K+  V+    T++IL+R + +  +  E  + F  M  + C PD + ++ ++  LCR 
Sbjct: 215 EMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRA 274

Query: 232 RRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            +   A +  + +  K     PDV+ YT L+RG+CR   + EA  +  EM   G++PN+ 
Sbjct: 275 GKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIV 334

Query: 289 TYSIVIDALCRCGQITRAHDVFAEML-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
           TY+ +I  LC   +  +  ++  +M  + G  P++ TFN L+  H  A   ++  +V+  
Sbjct: 335 TYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFEN 394

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-------GCNPNASTFNMIFR 400
           MK+L   AD+ +Y+ LI   C+ G    A  + + +  K       G  P A+++  +F+
Sbjct: 395 MKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQ 454

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + G    A R+  ++   +   + ++Y I++       S +    L   M   +  P
Sbjct: 455 YLCENGKTKKAERVLRQLMK-RGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLP 513

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +++ Y  LI  +        A + + +M++    KP +S +  +L +L   G + +   +
Sbjct: 514 DIDIYDYLIDGFLRKDKPLLAKETLEKMLKSS-YKPQTSTWHSILNRLLEQGCVHESAGV 572

Query: 521 VEKMVDR 527
           +  M++R
Sbjct: 573 IVMMLER 579



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 133/313 (42%), Gaps = 50/313 (15%)

Query: 134 FFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLM--KSRNVEITVDTFSIL 189
           FF  +T+   F   PD+  Y+ +++   +  +  +A + ++ M  K +++   V T++ L
Sbjct: 248 FFKEMTS---FDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTL 304

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +R Y R     EA+     M   G  P+ + ++ +I  LC  ++  + +   + +K    
Sbjct: 305 IRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGG 364

Query: 250 --PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             PD   +  L+   C AGN+ EA +VF  MK   +  +  +YS++I  LC+ G   +A 
Sbjct: 365 SIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAE 424

Query: 308 DVFAEMLE-------VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE------ 354
            +F E+ E        G +P + ++  + +   +  +T+K  +V  Q+ + G +      
Sbjct: 425 MLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQ 484

Query: 355 ----------------------------ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
                                        D   Y++LID   +  K   A + L  M++ 
Sbjct: 485 IVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKS 544

Query: 387 GCNPNASTFNMIF 399
              P  ST++ I 
Sbjct: 545 SYKPQTSTWHSIL 557


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 189/382 (49%), Gaps = 36/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L++     G A EA+   + +  +G   D+++++I+++ LC+      A       
Sbjct: 82  TFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLR-- 139

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K     DV++Y+ ++   C+   +++A R++ EM   GI PNVYT+SI++DALC+  +  
Sbjct: 140 KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGK 199

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A ++ A M++ G +PN +T+  +M  +   ++  K L ++N M + G E +   YN +I
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           +  CK  ++++A+ +   M  K  NP+  T+N++   + KLG ++ +  +  +M+ +   
Sbjct: 260 NGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKT 319

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            + +TYN L+     +   D  + L KE+++  ++PNV TY  LI   C  G   +AY  
Sbjct: 320 VDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVI 379

Query: 485 IREMIEEK---------------CLK-------------------PGSSVYEMVLQQLRR 510
            +E++ E                C K                   P +  YE ++  L  
Sbjct: 380 FQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSE 439

Query: 511 AGQLQKHEELVEKMVDRGFTAR 532
            G+  K  +L+  M+ RG + R
Sbjct: 440 KGETVKTNKLLCAMIVRGLSKR 461



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 152/295 (51%), Gaps = 1/295 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K +    A+     M ++ +   V TFSILV    +     +A++    M
Sbjct: 149 MYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMM 208

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            + G  P+ + +  ++   C   + ++A + F+ + ++  EP+V  Y  ++ G C+   +
Sbjct: 209 MKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRV 268

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  +F+EM    I P+V TY+I+ID LC+ G+I+ + ++  EM  +G   + IT+N+L
Sbjct: 269 DEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSL 328

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K    ++ + +  ++K  G + +  TY  LID  CKDG+LEDA  +   ++ +G 
Sbjct: 329 LHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGY 388

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +    T+N++   + K G  + A  +  +M+D  C P+ V+Y  ++   +    T
Sbjct: 389 HITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGET 443



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 148/300 (49%), Gaps = 1/300 (0%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           + +++   V   V  +S ++    +     +A   ++ M   G  P+   FSI++  LC+
Sbjct: 135 MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCK 194

Query: 231 KRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
            R+  +A +     +K   +P+V+ Y  ++ G+C    +++A  +F  M   G++PNV+ 
Sbjct: 195 DRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWC 254

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+I+I+ LC+  ++  A ++F EM      P+ +T+N L+    K  +    L++ ++M+
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMR 314

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
            +G   D ITYN L+   CK+  L+ AI ++  +  +G  PN  T+  +   + K G + 
Sbjct: 315 SIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLE 374

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A+ ++ ++          TYN+++         D  L L   ME+N   P+  +Y  +I
Sbjct: 375 DAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETII 434



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 172/377 (45%), Gaps = 34/377 (9%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-L 244
           F+ ++   V+      A+  F ++E  G  P  +  +I+++  C     +   S     L
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEA--------------ERVFREMKMAG-------- 282
           K  +EP+ I +T L++G C  G   EA              ++V   + M G        
Sbjct: 73  KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132

Query: 283 ----------IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
                     +  +V  YS +ID+LC+   +T A+ +++EM+  G  PN  TF+ L+   
Sbjct: 133 AAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDAL 192

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K  + ++ + +   M + G + + +TY  ++D +C   ++  A+ + N MV++G  PN 
Sbjct: 193 CKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNV 252

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
             +N+I   + K   V+ A  ++ +M   K  P+ VTYNIL+            L+L  E
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDE 312

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M       ++ TY  L+   C   H + A   ++E I+++ ++P    Y  ++  L + G
Sbjct: 313 MRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKE-IKDQGIQPNVCTYTTLIDGLCKDG 371

Query: 513 QLQKHEELVEKMVDRGF 529
           +L+    + ++++  G+
Sbjct: 372 RLEDAYVIFQEILTEGY 388



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 141/317 (44%), Gaps = 39/317 (12%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P ++ + +++    +  +   A  +FR+++  GI+P++ T +I+++  C  G IT    +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 310 FAEMLEVGCEPNSITFNNLMRV---------------HV--------------------K 334
             ++L++G EPNSITF  L++                HV                    K
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
              T   +Q+   +++    AD + Y+ +ID  CK   + DA ++ + M+ KG  PN  T
Sbjct: 128 MGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           F+++   + K      A  +   M     +PN VTY  +M  +      +  L +   M 
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           +  VEPNV  Y I+I   C     + A    +EM  +K + P    Y +++  L + G++
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKK-INPDVVTYNILIDGLCKLGKI 303

Query: 515 QKHEELVEKMVDRGFTA 531
               ELV++M   G T 
Sbjct: 304 STSLELVDEMRSIGKTV 320



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 140/309 (45%), Gaps = 42/309 (13%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +++   K R+   A + + +M  + V+  V T+  ++  Y       +A++ FN M + G
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS--- 269
             P+   ++I+I+ LC+K+R  EA + F  +   K  PDV+ Y  L+ G C+ G IS   
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307

Query: 270 --------------------------------EAERVFREMKMAGIQPNVYTYSIVIDAL 297
                                           +A  + +E+K  GIQPNV TY+ +ID L
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C+ G++  A+ +F E+L  G      T+N ++    K    ++ L + ++M+   C  D 
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDA 427

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN-ASTFNMIFRCISKLGDVNGAHRMYG 416
           ++Y  +I    + G+     K+L +M+ +G +       NM     + + D+N     Y 
Sbjct: 428 VSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNM-----TTIADLNDKWAAYA 482

Query: 417 KMKDLKCEP 425
            ++D    P
Sbjct: 483 SLEDGMIHP 491



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/216 (20%), Positives = 96/216 (44%), Gaps = 4/216 (1%)

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           ML++   P  + FN+++   VK +     + ++ Q++  G +   +T   L++C+C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +     +L  +++ G  PN+ TF  + + +   G    A   +  +     + + V+Y I
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           LM        T   +++   + +  V  +V  Y  +I   C      +AY+   EMI  K
Sbjct: 121 LMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMI-AK 176

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + P    + +++  L +  + ++   L+  M+ +G
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKG 212


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 186/383 (48%), Gaps = 38/383 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
           T++ ++  Y + G+  +A          G  PD+  +  +I+  C+      A + F D 
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L     P +++Y  L++G  + G I  A ++  EM   G  PN++TY++VI+ LC+ G +
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  +  + +  GC P+  T+N L+  + K  + +   ++ N+M   G   D ITYN L
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI------------------------- 398
           ++  CK GK E+ +++  +M  KGC PN  T+N+I                         
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536

Query: 399 ----------FRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                     F    K+GD++GA++++ +M K       T TYNI++  F+   + +M +
Sbjct: 537 KPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAM 596

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           KL   M+ +  +P+  TYR++I  +C MG+    YK++ E +E++ + P  + +  VL  
Sbjct: 597 KLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFI-PSLTTFGRVLNC 655

Query: 508 LRRAGQLQKHEELVEKMVDRGFT 530
           L    ++ +   ++  M+ +G  
Sbjct: 656 LCVKDKVHEAVGIIHLMLQKGIV 678



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 11/372 (2%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A    D M +R +   V  F+ LV    + GL  E+     ++ + G  P+   F+
Sbjct: 196 EHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFN 255

Query: 223 IVISILCRK---------RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           I +  LCR+          R  EA+ +   +    FEPD + Y +++ G+C+ G + +A 
Sbjct: 256 IFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDAN 315

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           RV ++    G +P+ +TY  +I+  C+ G   RA  VF + L  G  P+ + +N L++  
Sbjct: 316 RVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGL 375

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +       LQ+ N+M   GC  +  TYN +I+  CK G + DA  +++  + KGC P+ 
Sbjct: 376 SQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDI 435

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N +     K   ++ A  M  +M      P+ +TYN L+     +  ++ V+++ K 
Sbjct: 436 FTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKA 495

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           MEE    PN+ TY I++   C     N A   + EM + K LKP    +  +     + G
Sbjct: 496 MEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEM-KSKGLKPDVVSFGTLFTGFCKIG 554

Query: 513 QLQKHEELVEKM 524
            +    +L  +M
Sbjct: 555 DIDGAYQLFRRM 566



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 173/367 (47%), Gaps = 11/367 (2%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+ R V+  V T++I ++ + +      A+     M E GC  + +A+  V++ L     
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A+  FD +  +   PDV+ +  LV   C+ G + E+ER+  ++   G+ PN++T++I
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 293 VIDALCRCGQITR---------AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            +  LCR G + R         A +   +M+  G EP+ +T+N+++  + K    +   +
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           V       G + D  TY  LI+  CKDG  + A+ V    + KG  P+   +N + + +S
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLS 376

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           + G +  A ++  +M +  C PN  TYN+++              L  +       P++ 
Sbjct: 377 QQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIF 436

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY  LI  YC     ++A + +  M  +  + P    Y  +L  L +AG+ ++  E+ + 
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQG-MTPDVITYNTLLNGLCKAGKSEEVMEIFKA 495

Query: 524 MVDRGFT 530
           M ++G T
Sbjct: 496 MEEKGCT 502



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 187/448 (41%), Gaps = 47/448 (10%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR-NVEITVDTFS 187
           L+ L  FN   +   F H+   Y  ++   G   +F+     +  M+   N  +    + 
Sbjct: 21  LKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYI 80

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
             ++ Y R G   EAV  F RM+ Y C P   + + +++IL      ++A   +  ++D+
Sbjct: 81  EAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDR 140

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             + DV  YT  ++ +C+      A R+ R M   G   N   Y  V+  L   G+   A
Sbjct: 141 GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHA 200

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVK-------------------------------- 334
            ++F EML     P+ + FN L+ V  K                                
Sbjct: 201 RELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQG 260

Query: 335 ---------ASRTEKVLQVYNQMKRL---GCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
                    A R  +V++    ++++   G E D +TYN +ID +CK G ++DA +VL  
Sbjct: 261 LCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKD 320

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
            V KG  P+  T+  +     K GD + A  ++         P+ V YN L++  +    
Sbjct: 321 AVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGL 380

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
               L+L  EM EN   PN+ TY ++I   C MG  ++A   + + I + C  P    Y 
Sbjct: 381 ILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGC-PPDIFTYN 439

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            ++    +  +L    E+V +M  +G T
Sbjct: 440 TLIDGYCKQLKLDSATEMVNRMWSQGMT 467



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 41/299 (13%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  V    LY+ +I    +      A   ++ M        + T+++++    + G  +
Sbjct: 362 RPSIV----LYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
           +A H  +     GC PD   ++ +I   C++ +   A    + +      PDVI Y  L+
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C+AG   E   +F+ M+  G  PN+ TY+I++D+LC+  ++  A D+  EM   G +
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537

Query: 320 PNSITFNNLMRVHVKAS----------RTEK--------------------------VLQ 343
           P+ ++F  L     K            R EK                           ++
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +++ MK  GC+ D  TY  +ID  CK G +    K L   + K   P+ +TF  +  C+
Sbjct: 598 LFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCL 656



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 134/264 (50%), Gaps = 10/264 (3%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+   K  + D A   ++ M S+ +   V T++ L+    +AG + E +  
Sbjct: 433 PDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEI 492

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  MEE GC P+ I ++I++  LC+ ++ +EA      +K K  +PDV+ +  L  G+C+
Sbjct: 493 FKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCK 552

Query: 265 AGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            G+I  A ++FR M K   +     TY+I++ A      +  A  +F+ M   GC+P++ 
Sbjct: 553 IGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNY 612

Query: 324 TFNNLMRVHVKASRTEKVLQ--VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           T+  ++    K     +  +  + N  KR        T+  +++C C   K+ +A+ +++
Sbjct: 613 TYRVVIDGFCKMGNITQGYKFLLENMEKRF--IPSLTTFGRVLNCLCVKDKVHEAVGIIH 670

Query: 382 SMVRKGCNPNASTFNMIFRCISKL 405
            M++KG  P   T N IF    K+
Sbjct: 671 LMLQKGIVP--ETVNTIFEADKKV 692


>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 489

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 190/390 (48%), Gaps = 17/390 (4%)

Query: 147 SPDLYHEMINLAGKVRQ-FDLAWHFIDLMKSRNVEITVDTFSILVRRYV----RAGLAAE 201
           SP      ++L+ ++R    L    + L     +  T  TF IL  R+     R  +A  
Sbjct: 89  SPCTIDLALDLSARLRHPRQLTNSILALFPRLRLPFTPRTFPILFERFAASQRRPDIAVR 148

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
              + +R   +    D   F+ ++  L + R AS+A S   +L+ +F PDV+ Y  L  G
Sbjct: 149 LFLSLHR--SHRVVQDLPLFNSLLDALGKSRHASKAASLVRALERRFPPDVVTYNTLADG 206

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG---- 317
           WCRA + S A  + R+M  +G+ P   TY+I++    R GQI  A + F +M + G    
Sbjct: 207 WCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDE 266

Query: 318 -CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
            C+P+ +++  ++     A + +K  +++++M + GC     TYN LI   CK G +EDA
Sbjct: 267 SCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDA 326

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           + V + MVRK   PN  T+ ++ R +  +G ++ A ++  +MK   CEP   TYN+L++ 
Sbjct: 327 VTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRY 386

Query: 437 FATSKSTDMVLKLKKEMEENE-VEPNVNTYRILIT-MYCGMGHWN--NAYKYIREMIEEK 492
                  +  L L + M + E   PN +TY I+I+ M+      +   A + + EM+E  
Sbjct: 387 SFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERG 446

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            L P   +   VL  L   G  Q   +L+ 
Sbjct: 447 YL-PRRFMLNRVLNGLMLTGNQQISRDLLR 475



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+ VTYN L   +  +K T   L L ++M E+ V P   TY I++  +   G   +A+ +
Sbjct: 195 PDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNF 254

Query: 485 IREMI-----EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +M      +E C KP    Y  ++  L  AGQL K  +L ++M   G T
Sbjct: 255 FLQMKKRGAKDESC-KPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCT 304


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 194/402 (48%), Gaps = 8/402 (1%)

Query: 133 SFFNWV--TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           SF+  +    RP FV       + +    K +Q+       + M    V     T +IL+
Sbjct: 73  SFYRMIHMNPRPSFVE----LGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILI 128

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FE 249
               R      AV   ++M + G  PD + F+ +I+ LC + R  EA   F+ +  +   
Sbjct: 129 NSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM 188

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+ + +T LV   C+ G +SEA  VF  M   G++PN+YTY+ +++  C   ++  A  V
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M+  GC P+  +++ L+  + K+ R ++   +  QM       +T+TYN L+   C 
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCH 308

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
              L +A ++   M   G  PN  T++++   + K G +  A ++   M++ K EP+ V 
Sbjct: 309 ASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVL 368

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YNIL+Q    +   ++  +L  ++  N + P+V TY I+I      G  + AYK  R+M 
Sbjct: 369 YNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM- 427

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           E+    P S  Y +++Q   +        +L+++MV R F+A
Sbjct: 428 EDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSA 469



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 173/354 (48%), Gaps = 36/354 (10%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN   ++     A   +  M    ++    TF+ L+      G   EAV  FN M    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
             P+ + F+I++ +LC+K   SEA+  F+++ +K  EP++  Y  L+ G+C    +++A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +VF  M   G  P+V++YSI+I+  C+  +I  A  +  +M E    PN++T+N LM+  
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK------ 386
             AS   +  +++ +M   G   +  TY+ L+D  CK G LE+A+K+L SM  +      
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 387 -----------------------------GCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
                                        G  P+  T+N++ + + K G  + A++++ K
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           M+D    P++ +YN+++Q F  ++     ++L  EM       + +T+++L+ +
Sbjct: 427 MEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDL 480



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 1/262 (0%)

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            I +A   F  M     +P+       + ++ +  Q +    +  +M   G   N  T N
Sbjct: 66  GIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLN 125

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    + S     + V ++M +LG + D++T+  LI+  C +G++++A+++ N M  +
Sbjct: 126 ILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
              PN  TF ++   + K G V+ A  ++  M +   EPN  TYN LM  +      +  
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            K+ + M      P+V++Y ILI  YC     + A   + +M  EK L P +  Y  ++Q
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQM-SEKELIPNTVTYNTLMQ 304

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L  A  L + +EL +KM   G
Sbjct: 305 GLCHASSLLEAQELFKKMCSSG 326



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 115/227 (50%), Gaps = 4/227 (1%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           VHS   Y  +IN   K R+ D A   +  M  + +     T++ L++    A    EA  
Sbjct: 261 VHS---YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQE 317

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
            F +M   G  P+   +SI++  LC+     EA     S+++ K EPD+++Y  L++G  
Sbjct: 318 LFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMF 377

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AG +  A+ +F ++   GI+P+V TY+I+I  L + G    A+ +F +M + G  P+S 
Sbjct: 378 IAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSC 437

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
           ++N +++  ++       +Q+ ++M      AD+ T+  L+D    D
Sbjct: 438 SYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLESHD 484


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 190/412 (46%), Gaps = 34/412 (8%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  + D A   ++ M        V+TF+ ++  + R     E     +RM
Sbjct: 247 IYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM 306

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSF-----------FDSLKDKFE--------- 249
              G  P+ + +  ++  LC+  R  EAQ+            F++L + F          
Sbjct: 307 ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEAT 366

Query: 250 -------------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
                        PDV  ++ LV G C+ G    A  +  +M   G +PN+ TY+I+ID 
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG 426

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            C+ GQ+  A  +  EML  G   N++ +N L+    K  +  + L ++ +M   GC+ D
Sbjct: 427 FCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPD 486

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             T+N LI   C+  ++EDA+ +   MV +G   N+ TFN +     + G++  A ++  
Sbjct: 487 IFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVN 546

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M    C  + +TYN L++    + + +  L L +EM    + P++ T  ILI  +C  G
Sbjct: 547 DMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAG 606

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             +NA +++R+MI  +   P    Y  ++  L + G++Q+   L EK+   G
Sbjct: 607 KVHNALEFMRDMI-HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 163/341 (47%), Gaps = 4/341 (1%)

Query: 145 VHSPDLYHEMINLAGKVRQFDL--AWHFI-DLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           V  P++ H    + G VR   L  A  F+ D M +      V TFS LV    + GL   
Sbjct: 341 VPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS 400

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVR 260
           A+   N M+  GC P+   ++I+I   C+K +  EA     + L   F  + + Y  L+ 
Sbjct: 401 ALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALIS 460

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
             C+ G I EA  +F EM   G +P+++T++ +I  LCR  ++  A  ++ +M+  G   
Sbjct: 461 ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIA 520

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           NS+TFN L+   ++    ++ L++ N M   GC  D ITYN LI   CK G +E  + + 
Sbjct: 521 NSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLF 580

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+RKG  P+  T N++       G V+ A      M      P+ VTYN L+      
Sbjct: 581 EEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKR 640

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
                 L L ++++   ++P+  TY  LI   C  G +++A
Sbjct: 641 GRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA 681



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 165/327 (50%), Gaps = 3/327 (0%)

Query: 146 HSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + PD++    ++N   K   F  A   ++ M ++  +  ++T++IL+  + + G   EA 
Sbjct: 378 YVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAG 437

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                M   G + + + ++ +IS LC+  +  EA   F  +  K  +PD+  + +L+ G 
Sbjct: 438 LILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGL 497

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           CR   + +A  ++R+M + G+  N  T++ +I A  R G+I  A  +  +ML  GC  + 
Sbjct: 498 CRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDE 557

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+N L++   K    EK L ++ +M R G     IT N LI+  C  GK+ +A++ +  
Sbjct: 558 ITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRD 617

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M+ +G +P+  T+N +   + K G +  A  ++ K++    +P+++TYN L+       +
Sbjct: 618 MIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGA 677

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILI 469
            D    L     EN   PN  T+ IL+
Sbjct: 678 FDDACFLLYRGVENGFVPNDVTWNILV 704



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 182/401 (45%), Gaps = 41/401 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +  F W  A+  + HS  +Y+ +I+  G    F +    +  MK   +      F ++++
Sbjct: 88  MEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMK 147

Query: 192 RYVRAGLAAEAVHAFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
            Y RAGL  +A      M+  Y C P   ++++V+ +                       
Sbjct: 148 YYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDV----------------------- 184

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
                  LV G C     S A  VF +M   G+ PN YT+ +V+ ALC   ++  A  + 
Sbjct: 185 -------LVVGNCP----SVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M + GC PNS+ +  L+    K  R ++ L++  +M  +GC  D  T+N +I   C+ 
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRL 293

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            ++ +  K+++ M+ KG  PN  T+  +   + K   ++ A  +  K+      PN V +
Sbjct: 294 NRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHF 349

Query: 431 NILMQMFA-TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           N L+  F    +  +    +  +M  N   P+V T+  L+   C  G + +A + + +M 
Sbjct: 350 NTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMD 409

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + C KP  + Y +++    + GQL++   ++ +M+ +GF+
Sbjct: 410 AKGC-KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFS 449



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 158/333 (47%), Gaps = 9/333 (2%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           EA+     M   GC PD   F+ VI   CR  R  E     D +  K F P+ + Y  L+
Sbjct: 263 EALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLM 322

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD-VFAEMLEVGC 318
            G C+   I EA+ +    K+ G  PNV  ++ +++   R G++  A   V+ +M+  G 
Sbjct: 323 HGLCKTCRIDEAQALLS--KVPG--PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGY 378

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+  TF+ L+    K       L++ N M   GC+ +  TY  LID  CK G+LE+A  
Sbjct: 379 VPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGL 438

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           +L  M+ KG + N   +N +   + K G ++ A  M+G+M    C+P+  T+N L+    
Sbjct: 439 ILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLC 498

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
                +  L L ++M    V  N  T+  LI  +   G    A K + +M+   C  P  
Sbjct: 499 RVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC--PLD 556

Query: 499 SV-YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + Y  +++ L + G ++K   L E+M+ +G T
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLT 589



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 1/268 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  +   A      M S+  +  + TF+ L+    R     +A+  +  M 
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 514

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNIS 269
             G   + + F+ +I    R+    EA    + +  +  P D I Y  L++  C+ G + 
Sbjct: 515 LEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVE 574

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +   +F EM   G+ P++ T +I+I+  C  G++  A +   +M+  G  P+ +T+N+L+
Sbjct: 575 KGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLI 634

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R ++ L ++ +++  G + D+ITYN LI   C++G  +DA  +L   V  G  
Sbjct: 635 NGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFV 694

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGK 417
           PN  T+N++     K  +  G    Y +
Sbjct: 695 PNDVTWNILVYNFGKQSNSEGQTITYAQ 722


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 173/349 (49%), Gaps = 4/349 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ ++  +   G    A+     M E G  AP++  +  VIS  C+  R  EA   FD 
Sbjct: 74  TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 133

Query: 244 L--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +  K + +P+ ++Y  L+ G+C  G +  A      M   G+   V TY++++ AL   G
Sbjct: 134 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 193

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A+++  EM   G  P+  T+N L+  H K    +K L+++  M R G  A  +TY 
Sbjct: 194 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 253

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI    K G++++  K+ +  VR+G  P+   +N +    S  G+++ A  + G+M+  
Sbjct: 254 SLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 313

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P+ VTYN LM+        D   KL  EM +  ++P++ TY  LI+ Y   G   +A
Sbjct: 314 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDA 373

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +   EM+  K   P    Y  ++Q L + GQ    E +V++MV+ G T
Sbjct: 374 LRIRNEMM-NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 421



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 158/321 (49%), Gaps = 2/321 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +I+   KV + D A    D M ++  V+     ++ L+  Y   G    A+   +RM
Sbjct: 111 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 170

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E G A     +++++  L    R +EA    + +  K   PDV  Y  L+ G C+ GN+
Sbjct: 171 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 230

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A  +F  M   G++  V TY+ +I AL + GQ+     +F E +  G  P+ + +N L
Sbjct: 231 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 290

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  H  +   ++  ++  +M++     D +TYN L+   C  G++++A K+++ M ++G 
Sbjct: 291 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 350

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +    S  GDV  A R+  +M +    P  +TYN L+Q    +   D    
Sbjct: 351 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 410

Query: 449 LKKEMEENEVEPNVNTYRILI 469
           + KEM EN + P+ +TY  LI
Sbjct: 411 MVKEMVENGITPDDSTYISLI 431



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 155/311 (49%), Gaps = 1/311 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + +  F+ +  + E      +Y+ +I       + D A  + D M  R V +TV T+++L
Sbjct: 126 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 185

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           V      G   EA      M   G APD   ++I+I+  C++    +A   F+++  +  
Sbjct: 186 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 245

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
              V+ YT+L+    + G + E +++F E    GI+P++  Y+ +I++    G I RA +
Sbjct: 246 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 305

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM +    P+ +T+N LMR      R ++  ++ ++M + G + D +TYN LI  + 
Sbjct: 306 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYS 365

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G ++DA+++ N M+ KG NP   T+N + + + K G  + A  M  +M +    P+  
Sbjct: 366 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 425

Query: 429 TYNILMQMFAT 439
           TY  L++   T
Sbjct: 426 TYISLIEGLTT 436



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 42/327 (12%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D  + +       +  ++R  C AG  + A  + R+M     +PN  TY+ VI   C 
Sbjct: 29  FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCS 84

Query: 300 CGQITRAHDVFAEMLE-VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADT 357
            G++  A D+  EM E  G  PN  T+  ++    K  R ++ ++V+++M   G  + + 
Sbjct: 85  RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 144

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + YN LI  +C  GKL+ A+   + MV +G     +T+N++   +   G    A+ +  +
Sbjct: 145 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 204

Query: 418 MKDLKCEPNTVTYNIL-------------MQMF------------ATSKSTDMVLKLKKE 452
           M      P+  TYNIL             +++F             T  S    L  K +
Sbjct: 205 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 264

Query: 453 MEENE----------VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           ++E +          + P++  Y  LI  +   G+ + A++ + EM E+K + P    Y 
Sbjct: 265 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYN 323

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++ L   G++ +  +L+++M  RG 
Sbjct: 324 TLMRGLCLLGRVDEARKLIDEMTKRGI 350



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 7/228 (3%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +FA+M  +     + TFN ++R    A +  + L++  QM R     + +TYN +I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 366 CHCKDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKC 423
             C  G+++ A+ ++  M  R G  PN  T+  +     K+G V+ A +++ +M    + 
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P  V YN L+  +      D  L  +  M E  V   V TY +L+      G    AY+
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + EM   K L P    Y +++    + G ++K  E+ E M  RG  A
Sbjct: 201 LVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 247


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 183/377 (48%), Gaps = 2/377 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   K ++ +    F+  M+ + V   V T++ L+  Y R GL  EA    + M   G
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P    ++ +I+ LC+  +   A+   D  LK    PD   Y  L+   CR  N+ +AE
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R+F EM   G+ P++ ++S +I  L + G + +A   F +M   G  P+++ +  L+   
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +     + L+V ++M   GC  D +TYN +++  CK+  L +A ++   M  +G  P+ 
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  +    SK G++N A  ++  M     +P+ VTYN L+  F      + V +L  +
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M    + PN  +Y ILI  YC MG  + A++   EM+ EK  +        +++   RAG
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV-EKGFEATIITCNTIVKGYCRAG 618

Query: 513 QLQKHEELVEKMVDRGF 529
              K +E +  M+ +G 
Sbjct: 619 NAVKADEFLSNMLLKGI 635



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 177/364 (48%), Gaps = 2/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M S+ V   + +FS L+    + G   +A+  F  M+  G APD + ++I+I 
Sbjct: 378 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 437

Query: 227 ILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR    SEA    D  L+     DV+ Y  ++ G C+   +SEA+ +F EM   G+ P
Sbjct: 438 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 497

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           + YT++ +I+   + G + +A  +F  M++   +P+ +T+N L+    K S  EKV +++
Sbjct: 498 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 557

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M       + I+Y  LI+ +C  G + +A ++ + MV KG      T N I +   + 
Sbjct: 558 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 617

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G+   A      M      P+ +TYN L+  F   ++ D    L  +ME + + P+V TY
Sbjct: 618 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 677

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            +++  +   G    A   + +MI E+ + P  S Y  ++        L++   + ++M+
Sbjct: 678 NVILNGFSRQGRMQEAELIMLKMI-ERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 736

Query: 526 DRGF 529
            RGF
Sbjct: 737 QRGF 740



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 232/492 (47%), Gaps = 36/492 (7%)

Query: 42  NPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLG-FSQ 100
           NPNSS   P L   ET       + +     ++PN S++ + S   +  + +L  G  + 
Sbjct: 34  NPNSSYGIPALQTLET------STTLNPSSVEDPNQSTSLSDSFLTEKVLLNLKQGKLNS 87

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTAR-PEFVHSPDLYHEMINLAG 159
           +        S V   +   C  R  + L Q   F + +T+  P F HS   +  MI++  
Sbjct: 88  LRNLLFRLDSVVVVDVLYKC--RENLQLGQ--RFIDSITSNCPNFKHSLQSFSAMIHI-- 141

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA-AEAVHAFNRMEEYG-CAPD 217
                        L++SR +    D  ++++R   ++G++  E V +   +  YG C  +
Sbjct: 142 -------------LVRSRRLP---DAQAVILRMVRKSGVSRVEIVESL--VLTYGNCGSN 183

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + F +++    + R+  E    F  LK K     +    +L+ G  + G +  A  +++
Sbjct: 184 PLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQ 243

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           E+  +G+Q NVYT +I+I+ALC+  +I       ++M E G  P+ +T+N L+  + +  
Sbjct: 244 EVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG 303

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
             E+  ++ + M   G +    TYN +I+  CK GK   A  VL+ M++ G +P+ +T+N
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           ++     +  ++  A R++ +M      P+ V+++ L+ + + +   D  LK  ++M+  
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 423

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P+   Y ILI  +C  G  + A K   EM+E+ C+      Y  +L  L +   L +
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD-VVTYNTILNGLCKEKMLSE 482

Query: 517 HEELVEKMVDRG 528
            +EL  +M +RG
Sbjct: 483 ADELFTEMTERG 494



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 38/352 (10%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  +I L  K    D A  +   MK+  +      ++IL+  + R G+ +EA+  
Sbjct: 392 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 451

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------ 247
            + M E GC  D + ++ +++ LC+++  SEA   F  + ++                  
Sbjct: 452 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 511

Query: 248 ------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                              +PDV+ Y  L+ G+C+   + +   ++ +M    I PN  +
Sbjct: 512 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 571

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y I+I+  C  G ++ A  ++ EM+E G E   IT N +++ + +A    K  +  + M 
Sbjct: 572 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 631

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G   D ITYN LI+   K+  ++ A  ++N M   G  P+  T+N+I    S+ G + 
Sbjct: 632 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 691

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
            A  +  KM +    P+  TY  L+    T  +     ++  EM +    P+
Sbjct: 692 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 10/356 (2%)

Query: 180 EITVDTFSI--LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           E++ DTF+   ++  + R      A+  FN+M + GC P+ + +S +I+ LC   R +EA
Sbjct: 245 EMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEA 304

Query: 238 QSFFDSLKD----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
              FD +++       P     T  +   C  G   +A R+F +MK  G +PNVYTY+ +
Sbjct: 305 ---FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  LC  G +  A  +F  M   G  PN++T+N L+ + V+  R +    V N M R GC
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + +TYN +I  +C  G  + A+ V+N+M+++G + N  T+N I +     G+   A R
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M+D  C+P+  +Y  L+  F      +    L  EM ++ + PN  TY  LI  YC
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                + A   +  M    C +P    Y +++  L +       EEL + M++ G 
Sbjct: 542 KDEKLDTATSLLEHMKRSGC-RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 176/366 (48%), Gaps = 2/366 (0%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           ++ AW     MK++  E  V T++ L+     +GL   A+  F+RM   G  P+ + ++ 
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I+IL   RR   A    + + ++   P+++ Y  +++G+C  G+  +A  V   M   G
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
              N+ TY+ +I   C  G  T A  +   M + GC+P+  ++  L+    K S+ E   
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            ++N+M   G   + +TY  LID +CKD KL+ A  +L  M R GC PN  T+N++   +
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           +K  + +GA  +   M +    PN VTY  ++     + ST + L++  +M E    PN+
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  LI      G    A     E+ E   L P    Y  +++    +G+++     + 
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 523 KMVDRG 528
           +M+  G
Sbjct: 695 RMIKAG 700



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 183/395 (46%), Gaps = 37/395 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F+D++    + + +  +S L+    R G+ A  +  ++RM   G  P+ + ++ VI+ LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +    ++A++    + + +  PD   YT+++ G CR  ++  A +VF +M   G +PN  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 289 TYSIVIDALCRCGQITRAHDV-----------------------------------FAEM 313
           TYS +I+ LC  G++  A D+                                   F +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              GCEPN  T+  L+     +   +  + ++++M R G   +T+TYN LI+   ++ ++
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A  VLN M R GC+PN  T+N + +    LGD   A  +   M       N VTYN +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++ +  S +T   L++   M +   +P+  +Y  LI  +C +    +A+    EM+++  
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG- 525

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           L P    Y  ++    +  +L     L+E M   G
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 173/385 (44%), Gaps = 4/385 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD +     + G  R+ DL  A    + M     E    T+S L+     +G   EA  
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M  +G  P     +  I  LC      +A   F  +K+K  EP+V  YT L+ G C
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +G +  A  +F  M   G+ PN  TY+ +I+ L    +I  A  V   M   GC PN +
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N +++ +      +K + V N M + G  A+ +TYN +I  +C  G    A+++L+ M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC P+  ++  +     K+  +  A  ++ +M D    PN VTY  L+  +   +  
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D    L + M+ +   PNV TY +LI       +++ A +  + MIEE    P    Y  
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF-PNVVTYTA 605

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L + G      E+  KM+++G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQG 630



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 3/305 (0%)

Query: 229 CRKRRA-SEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           C  + A +   SF D L +      +  Y+ L+    R G  +     +  M   G+QPN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           +  Y+ VI+ALC+ G +  A  +  ++ E    P++ T+ +++  H +    +  LQV+N
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           QM + GCE +T+TY+ LI+  C  G++ +A  ++  M+  G  P A T       +  +G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
               A R++  MK+  CEPN  TY  L+     S    + + L   M  + V PN  TY 
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            LI +         A+  +  M    C  P    Y  +++     G  +K   ++  M+ 
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGC-SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 527 RGFTA 531
           RG +A
Sbjct: 454 RGHSA 458



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 186/438 (42%), Gaps = 32/438 (7%)

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
           +   HS +  T   +I+  C   +    L++L        +P+       Y E+I    K
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS----YTELICGFCK 507

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           + + + A+   + M    +     T++ L+  Y +      A      M+  GC P+   
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++++I  L ++   S A+     + ++   P+V+ YT ++ G C+ G+ S A  +F +M 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G  PN+ TYS +I AL + G++  A ++FAE+   G  P+ IT+  ++  ++ + + E
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 340 KVLQVYNQMKRLGCEADTITYNFLI-----DCHCKDGKL------------------EDA 376
                  +M + GC+    TY  LI     +    D +L                  +DA
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDA 747

Query: 377 IKVLNSMVRKGCNPNASTF--NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           + V+++ + +  +P  S    N +   +S  G    A+ + G M      P+   YN L+
Sbjct: 748 VSVMSAKLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL 806

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                 ++ D+ + + K M     E ++N Y+ LI   C + H     +   E +  +  
Sbjct: 807 CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL-HRRKEARITFENMLMRTW 865

Query: 495 KPGSSVYEMVLQQLRRAG 512
            P   V  +++  L R G
Sbjct: 866 NPDDVVQAVLIDGLLRDG 883



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 25/343 (7%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K   F  A     +M    +   V T++ ++    + G  + A+  FN+M 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+ + +S +I  L ++ +  EA++ F  L +    PD I Y  ++  +  +G + 
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL--------------------CRCGQITRAHDV 309
            A      M  AG QP ++TY ++I  L                    C  G  T   D 
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDA 747

Query: 310 F----AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
                A++ E+    +    N L+     A R  +  ++   M   G   D   YN L+ 
Sbjct: 748 VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 807

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              +   ++ A+ V   M  +GC  + + +  +   + +L     A   +  M      P
Sbjct: 808 SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 867

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + V   +L+         D+ ++    ME     P+ + Y IL
Sbjct: 868 DDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 95/245 (38%), Gaps = 25/245 (10%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS------ILCRKRRAS--- 235
           T+  ++  Y+ +G    A +   RM + GC P    + ++I       +L  +R A+   
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 731

Query: 236 --------------EAQSFFDSLKDKFEP--DVIVYTNLVRGWCRAGNISEAERVFREMK 279
                         +A S   +   + +P   V V   LV     AG   EA  +   M 
Sbjct: 732 VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 791

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G+ P+   Y+ ++ +L R   +  A  VF  M   GCE +   +  L+    +  R +
Sbjct: 792 SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           +    +  M       D +    LID   +DG  +  ++ L+ M  +   P+   + ++ 
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911

Query: 400 RCISK 404
           R  SK
Sbjct: 912 REASK 916


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 173/352 (49%), Gaps = 7/352 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +++   K    ++A   +D M S  ++  V  ++ +++    A    +A  
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
               M +  C  D + F+I++   C+           +  L+    PDVI YT ++ G+C
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFC 411

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC   +   A D+ ++M+E GC PN +
Sbjct: 412 KEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPV 471

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN ++    K    E+ +++  QM   GC  D I+Y+ +ID   K GK ++A+++LN M
Sbjct: 472 TFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 531

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG +PN   ++ I   +SK G +N   +M+  ++D+    + V YN ++        T
Sbjct: 532 VNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGT 591

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           D  ++    M  +   PN +TY ILI      G    A    +EM+ E C K
Sbjct: 592 DRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEA----QEMLTELCSK 639



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 182/389 (46%), Gaps = 7/389 (1%)

Query: 148 PDLYHEMINLA---GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYV-RAGLAAEAV 203
           P +YH ++  A   G    F  A   +  +  R   + V   ++++     + G   EA+
Sbjct: 150 PPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEAL 209

Query: 204 HAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
                +   +GC PD ++++ V+  LC  +R    Q   + + +    P+V+ +  L+  
Sbjct: 210 RLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGY 269

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            CR G      +V  +M   G  P++  Y+ V+D +C+ G +  AH++   M   G +PN
Sbjct: 270 LCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPN 329

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            + +N +++    A R E+  ++  +M    C  D +T+N L+D  C++G +   I++L 
Sbjct: 330 VVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLE 389

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M+  GC P+  T+  +     K G ++ A  +   M    C PNT++Y I+++   +++
Sbjct: 390 QMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAE 449

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                  L  +M E    PN  T+  +I   C  G    A + +++M+   C  P    Y
Sbjct: 450 RWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC-SPDLISY 508

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             V+  L +AG+  +  EL+  MV++G +
Sbjct: 509 STVIDGLGKAGKTDEALELLNVMVNKGMS 537



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 173/356 (48%), Gaps = 7/356 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  +VR     G  A+A+   + M   GCAP    + +++   C +      +S    L
Sbjct: 117 TYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVL 176

Query: 245 KD----KFEPDVIVYTNLVRGWC-RAGNISEAERVFREMKMA-GIQPNVYTYSIVIDALC 298
           +D        DV     ++   C + G++ EA R+ R++  + G  P+V +Y+ V+  LC
Sbjct: 177 QDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLC 236

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
              +  R  D+  EM+ VGC PN +TFN L+    +    E+V QV  QM   GC  D  
Sbjct: 237 MAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIR 296

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
            Y  ++D  CK+G LE A ++L+ M   G  PN   +N + + +        A  +  +M
Sbjct: 297 MYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEM 356

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
            D  C  + VT+NIL+  F  +     V++L ++M E+   P+V TY  +I  +C  G  
Sbjct: 357 FDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLI 416

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           + A   ++ M    C +P +  Y +VL+ L  A +    E+L+ +M+++G +  P+
Sbjct: 417 DEAVMLLKSMAACGC-RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPV 471



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 27/320 (8%)

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
            S +I  LC   R +EA     +   +    V+ Y  +V G+CRAG ++ A R+   +  
Sbjct: 52  LSALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASVP- 110

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT-- 338
             + PN YTY  V+ ALC  G+I  A  V  EM   GC P    ++ ++           
Sbjct: 111 --VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGG 168

Query: 339 -EKVLQVYNQMKRLGCEADTITYNFLIDCHC-KDGKLEDAIKVLNSMVRK-GCNPNASTF 395
               ++V   +   GC  D    N +++  C + G +++A+++L  +    GC+P+  ++
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 396 NMIFR--CISKLGDVNGAHRMYGKMKDL-------KCEPNTVTYNILMQMFATSKSTDMV 446
           N + +  C++K          +G+++DL        C PN VT+N L+     +   + V
Sbjct: 229 NAVLKGLCMAK---------RWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERV 279

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            ++  +M ++   P++  Y  ++   C  GH   A++ +  M     LKP    Y  VL+
Sbjct: 280 HQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYG-LKPNVVCYNTVLK 338

Query: 507 QLRRAGQLQKHEELVEKMVD 526
            L  A + ++ EEL+ +M D
Sbjct: 339 GLCSAERWEQAEELLAEMFD 358



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 3/243 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +IN   K    D A   +  M +        +++I+++    A    +A   
Sbjct: 398 PDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDL 457

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
            ++M E GC+P+ + F+ VI+ LC+K    +A       L +   PD+I Y+ ++ G  +
Sbjct: 458 MSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGK 517

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG   EA  +   M   G+ PN   YS +  AL + G+I R   +F  + +V    +++ 
Sbjct: 518 AGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVL 577

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    K   T++ ++    M   GC  +  TY  LI     +G +++A ++L  + 
Sbjct: 578 YNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELC 637

Query: 385 RKG 387
            KG
Sbjct: 638 SKG 640


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 2/344 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ L+  Y + G   EA      M   G  P+ I+++++I+ LCR+    EA    +
Sbjct: 249 VVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILE 308

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  K F PD + Y  L+ G+C+ GN  +A  +  EM   G+ P+V TY+ +I+++C+  
Sbjct: 309 EMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR 368

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            + RA + F +M   G  PN  T+  L+    +     +  ++ N+M   G     +TYN
Sbjct: 369 NLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 428

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
             I  HC   ++E+A+ V+  MV KG  P+  +++ I     + G+++ A +M  +M + 
Sbjct: 429 AFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 488

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P+ VTY+ L+Q     +       L +EM +  + P+  TY  LI  YC  G  N A
Sbjct: 489 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 548

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
                EMI +  L P +  Y +++  L +  + ++ + L+ K++
Sbjct: 549 LHLHDEMIHKGFL-PDAVTYSVLINGLNKQARTREAKRLLFKLI 591



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 192/388 (49%), Gaps = 8/388 (2%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA----GLAAEA 202
           S  ++  M+     +   D A + I+L KS      V +++ ++   VR+     L+AE 
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
           V  +  M     +P+   ++I+I   C      +    F  + ++   P+V+ Y  L+  
Sbjct: 201 V--YREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           +C+ G I EA  + + M   G+QPN+ +Y+++I+ LCR G +  A ++  EM   G  P+
Sbjct: 259 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 318

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T+N L+  + K     + L ++ +M R G     +TY  LI+  CK   L  A++  +
Sbjct: 319 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 378

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M  +G  PN  T+  +    S+ G +N A+R+  +M +    P+ VTYN  +      +
Sbjct: 379 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 438

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             +  L + +EM E  + P+V +Y  +I+ +C  G  + A++  +EM+ EK + P +  Y
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV-EKGVSPDAVTY 497

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             ++Q L    +L +  +L ++M+D G 
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGL 525



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 191/430 (44%), Gaps = 52/430 (12%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K+ + D A+  +  M S+ ++  + ++++++    R G   EA      M 
Sbjct: 252 YNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMG 311

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD++ ++ +++  C++    +A     + +++   P V+ YT L+   C+A N++
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A   F +M++ G++PN  TY+ +ID   R G +  A+ +  EM E G  P+ +T+N  +
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H    R E+ L V  +M   G   D ++Y+ +I   C+ G+L+ A ++   MV KG +
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A T++ + + + ++  +  A  +  +M D+   P+  TY  L+  +      +  L L
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551

Query: 450 KKEMEENEVEPNVNTYRILIT--------------------------------------- 470
             EM      P+  TY +LI                                        
Sbjct: 552 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 611

Query: 471 -----------MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
                       +C  G  + A +    M+E    KPG +VY +++    R G L K   
Sbjct: 612 IEFKSVVALIKGFCMKGLMHEADRVFESMVERNH-KPGEAVYNVIIHGHCRGGNLPKAFN 670

Query: 520 LVEKMVDRGF 529
           L ++M+  GF
Sbjct: 671 LYKEMIHSGF 680



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 6/299 (2%)

Query: 237 AQSFFDSLKDKFE---PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             S F  LKD +        V+  +V+ +     I +A       K +G  P V +Y+ V
Sbjct: 124 GSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSV 183

Query: 294 IDALCRC-GQIT-RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           +DA+ R  G +   A +V+ EM+     PN  T+N L+R        +K L  + +M+R 
Sbjct: 184 LDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERN 243

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           GC  + +TYN LID +CK G++++A  +L SM  KG  PN  ++N+I   + + G +  A
Sbjct: 244 GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA 303

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  +M      P+ VTYN L+  +    +    L +  EM  N V P+V TY  LI  
Sbjct: 304 WEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 363

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            C   + N A ++  +M   + L+P    Y  ++    R G L +   ++ +M + GF+
Sbjct: 364 MCKARNLNRAMEFFDQM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 16/225 (7%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDS 243
           T++ L+  Y   G   +A+H  + M   G  PD + +S++I+ L ++ R  EA+   F  
Sbjct: 531 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590

Query: 244 LKDKFEPDVIVYTNLV---------------RGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + ++  P  + Y  L+               +G+C  G + EA+RVF  M     +P   
Sbjct: 591 IYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEA 650

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+++I   CR G + +A +++ EM+  G  P+++T   L++   K    E++ +V    
Sbjct: 651 VYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDT 710

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
            R     +      L++ + K+G +E  + VL  M + G  PN+ 
Sbjct: 711 LRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNSG 755


>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
 gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
          Length = 491

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 185/397 (46%), Gaps = 46/397 (11%)

Query: 147 SPDLYHEMINLAGKVRQ-FDLAWHFIDLMKSRNVEITVDTFSILVRRYV----RAGLAAE 201
            P      ++L+ ++R+   L    + L     +  T  TF IL  R      R  LA  
Sbjct: 91  GPSTLDLALDLSARLRRPRQLTNSILGLFPRHRLAFTPRTFPILFERLAVSQRRPDLAVR 150

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
              + +R   +  A D   F+ ++  L + R A +A S   +L+ +F PDV+ Y  L  G
Sbjct: 151 LFLSLHR--SHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADG 208

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG---- 317
           WCR  + S A  V R M  +GI P   TY+I++    R GQ+  A D F +M + G    
Sbjct: 209 WCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDE 268

Query: 318 -CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
            C+P+ +++  ++     A + EK  +V+++M + GC     TYN LI   CK G +EDA
Sbjct: 269 SCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDA 328

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           + V + M  KG  PN  T+ ++ R +   G ++   ++  +MK+  CEP   TYN+L++ 
Sbjct: 329 VTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRY 388

Query: 437 FATSKSTDMVLKLKKEMEEN-EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                  +  L L ++M +  E  PN +TY I+I+             ++R+  E     
Sbjct: 389 LFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAM-----------FMRKRAE----- 432

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
                 +MVL              +VE+MVDRG+  R
Sbjct: 433 ------DMVLA-----------ARMVEEMVDRGYLPR 452



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 150/316 (47%), Gaps = 11/316 (3%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L++ +++   K R    A   +  ++ R     V T++ L   + R    + A+     M
Sbjct: 167 LFNSLLDALSKSRHAGKAASLVRALEQRFTPDVV-TYNTLADGWCRVKDTSRALDVLRLM 225

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF------EPDVIVYTNLVRGWC 263
            E G AP K  ++I++    R  +   A  FF  +K +       +PDV+ YT +V G  
Sbjct: 226 VESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLG 285

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AG + +A +VF EM   G  P+V TY+ +I  +C+ G +  A  VF  M   G  PN +
Sbjct: 286 VAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVV 345

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+R    A + ++ L++  +MK  GCE    TYN LI    ++G++E  + +   M
Sbjct: 346 TYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKM 405

Query: 384 VR-KGCNPNASTFNMIFRCI---SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + + C PN  T+N+I   +    +  D+  A RM  +M D    P    +N ++     
Sbjct: 406 SKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLNGLML 465

Query: 440 SKSTDMVLKLKKEMEE 455
           + + ++  KL +  E+
Sbjct: 466 TGNQELSRKLLRMQEK 481


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 198/412 (48%), Gaps = 12/412 (2%)

Query: 128 LLQVLSFFNWVTARPEFVHS-------PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRN 178
           L+   +   W+    + V S       PDL    +   G  +  + D A+   D M+  +
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343

Query: 179 VEIT-VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
             +  V T++ LV    +   +++A+     M + G  P  +  +IV+  LC++ +  EA
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 238 QSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
               + + ++   PDVI Y  L+  +C+AGN+++A  +  EM   G++ + +T + V+  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LC+  +   A ++     + G  P+ +++  +M  + K    E  L++++QM        
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TYN LI   C+  +L++AI  LN +V KG  P+ +T+N+I     K GD+  A R + 
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           KM +   +P+ VT N LM         D  LKL +   E   + +V TY  LI   C +G
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + A  +  +M E K L+P +  Y +VL  L  AG+ ++   ++ K+ D G
Sbjct: 644 DVDTALHFFDDM-EVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 7/336 (2%)

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF--FDSLKD-KFEPDVIV 254
           LAA+ +H+  R    G  P   A + V+S L R        S   F SL + +  P+   
Sbjct: 153 LAAQLLHSLRR--RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYT 210

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           +  LV   C  G +++A      M+  G+ P+  TY+ +++A CR G +  A  + A M 
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  P   T+N L+    +    ++  +V   M   G E D  TYN L    C+ GK++
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330

Query: 375 DAIKVLNSMVRKGCN-PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +A ++ + M R     P+  T+N +     K    + A R+  +M+D   +P  VT+NI+
Sbjct: 331 EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++        +  L   +++ E  + P+V TY  LI  YC  G+   A+  + EM+  K 
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV-GKG 449

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           LK  +     VL  L +  + +  EEL+     RGF
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGF 485



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 2/179 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A    +    +  ++ V T++ L++   + G    A+H F+ ME  G  PD   ++
Sbjct: 609 KLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYN 668

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVR-GWCRAGNISEAERVFREMKMA 281
           +V+S L    R+ EA +    L D  +        L++       ++ E E         
Sbjct: 669 VVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSE 728

Query: 282 GIQPNVY-TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             Q N   TY   ++ LC  GQ+  A  V  EM++ G   +S T+  LM   +K  + +
Sbjct: 729 KAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQ 787


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 10/356 (2%)

Query: 180 EITVDTFSI--LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           E++ DTF+   ++  + R      A+  FN+M + GC P+ + +S +I+ LC   R +EA
Sbjct: 245 EMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEA 304

Query: 238 QSFFDSLKD----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
              FD +++       P     T  +   C  G   +A R+F +MK  G +PNVYTY+ +
Sbjct: 305 ---FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  LC  G +  A  +F  M   G  PN++T+N L+ + V+  R +    V N M R GC
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + +TYN +I  +C  G  + A+ V+N+M+++G + N  T+N I +     G+   A R
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M+D  C+P+  +Y  L+  F      +    L  EM ++ + PN  TY  LI  YC
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                + A   +  M    C +P    Y +++  L +       EEL + M++ G 
Sbjct: 542 KDEKLDTATSLLEHMKRSGC-RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 176/366 (48%), Gaps = 2/366 (0%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           ++ AW     MK++  E  V T++ L+     +GL   A+  F+RM   G  P+ + ++ 
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I+IL   RR   A    + + ++   P+++ Y  +++G+C  G+  +A  V   M   G
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
              N+ TY+ +I   C  G  T A  +   M + GC+P+  ++  L+    K S+ E   
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            ++N+M   G   + +TY  LID +CKD KL+ A  +L  M R GC PN  T+N++   +
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           +K  + +GA  +   M +    PN VTY  ++     + ST + L++  +M E    PN+
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  LI      G    A     E+ E   L P    Y  +++    +G+++     + 
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 523 KMVDRG 528
           +M+  G
Sbjct: 695 RMIKAG 700



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 183/395 (46%), Gaps = 37/395 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F+D++    + + +  +S L+    R G+ A  +  ++RM   G  P+ + ++ VI+ LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +    ++A++    + + +  PD   YT+++ G CR  ++  A +VF +M   G +PN  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 289 TYSIVIDALCRCGQITRAHDV-----------------------------------FAEM 313
           TYS +I+ LC  G++  A D+                                   F +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              GCEPN  T+  L+     +   +  + ++++M R G   +T+TYN LI+   ++ ++
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A  VLN M R GC+PN  T+N + +    LGD   A  +   M       N VTYN +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++ +  S +T   L++   M +   +P+  +Y  LI  +C +    +A+    EM+++  
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG- 525

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           L P    Y  ++    +  +L     L+E M   G
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 174/385 (45%), Gaps = 4/385 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD +     + G  R+ DL  A    + M     E    T+S L+     +G   EA  
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M  +G  P     +  I  LC      +A   F  +K+K  EP+V  YT L+ G C
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +G +  A  +F  M   G+ PN  TY+ +I+ L    +I  A  V   M   GC PN +
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N +++ +      +K + V N M + G  A+ +TYN +I  +C  G    A+++L+ M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC P+  ++  +     K+  +  A  ++ +M D    PN VTY  L+  +   +  
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D    L + M+ +   PNV TY +LI       +++ A +  + MIEE  + P    Y  
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYTA 605

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L + G      E+  KM+++G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQG 630



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 2/302 (0%)

Query: 231 KRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           K   +   SF D L +      +  Y+ L+    R G  +     +  M   G+QPN+  
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ VI+ALC+ G +  A  +  ++ E    P++ T+ +++  H +    +  LQV+NQM 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + GCE +T+TY+ LI+  C  G++ +A  ++  M+  G  P A T       +  +G   
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A R++  MK+  CEPN  TY  L+     S    + + L   M  + V PN  TY  LI
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +         A+  +  M    C  P    Y  +++     G  +K   ++  M+ RG 
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGC-SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 530 TA 531
           +A
Sbjct: 457 SA 458



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 25/343 (7%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K   F  A     +M    +   V T++ ++    + G  + A+  FN+M 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+ + +S +I  L ++ +  EA++ F  L +    PD I Y  ++  +  +G + 
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL--------------------CRCGQITRAHDV 309
            A      M  AG QP ++TY ++I  L                    C  G  T   D 
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDA 747

Query: 310 F----AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
                A++ E+    +    N L+     A R  +  ++   M   G   D   YN L+ 
Sbjct: 748 VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 807

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              +   ++ A+ V   M  +GC  + + +  +   + +L     A   +  M      P
Sbjct: 808 SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 867

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + V   +L+         D+ ++    ME     P+ + Y IL
Sbjct: 868 DDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 188/371 (50%), Gaps = 9/371 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L   MI++ G++ Q +LA +  +   +     TV  FS L+  Y R+G   EA+  F  M
Sbjct: 187 LASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETM 246

Query: 210 EEYGCAPDKIAFSIVISILCRK-----RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
           +  G  P+ + ++ VI   C K      RA+E   F + L++  +PD I + +L+    R
Sbjct: 247 KSSGLKPNLVTYNAVIDA-CGKGGVDFNRAAEI--FDEMLRNGVQPDRITFNSLLAVCGR 303

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G    A  +F EM   GI+ +++TY+ ++DA+C+ GQ+  A  + +EM      PN +T
Sbjct: 304 GGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVT 363

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ ++  + KA R ++ L ++N+MK      D ++YN L+  + K G+ E+A+ V   M 
Sbjct: 364 YSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME 423

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G   +A T+N +     K G      R++ +MK  +  PN +TY+ L+ +++      
Sbjct: 424 SSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQ 483

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             +++ +E ++  ++ +V  Y  LI   C  G   +A  ++ EM +E  ++P    Y  +
Sbjct: 484 EAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG-IRPNVVTYNSI 542

Query: 505 LQQLRRAGQLQ 515
           +    R+G  +
Sbjct: 543 IDAFGRSGSAE 553



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 146/349 (41%), Gaps = 65/349 (18%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K  Q DLA+  +  M  +++   V T+S ++  Y +AG   EA++ FN M+
Sbjct: 329 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 388

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA----------------------------QSFFD 242
                 D+++++ ++SI  +  R  EA                            Q  ++
Sbjct: 389 FASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYE 448

Query: 243 SLKDKFE--------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
            +K  FE        P+++ Y+ L+  + + G   EA  VFRE K AG++ +V  YS +I
Sbjct: 449 EVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALI 508

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE--------------- 339
           DALC+ G +  A     EM + G  PN +T+N+++    ++   E               
Sbjct: 509 DALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETNVSKMS 568

Query: 340 ----KVLQVYNQMKRLGCEADTITYNFL-----IDCHCKD---GKLED--AIKVLNSMVR 385
               KV++   + +    E + I   F        CH K    G+ E    + V + M  
Sbjct: 569 SSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHE 628

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
               PN  TF+ I    S+      A  +  +++    +   V + +LM
Sbjct: 629 LDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 677


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/547 (23%), Positives = 242/547 (44%), Gaps = 67/547 (12%)

Query: 41  TNPNSSPDTPFLSPEETLI-----SEKFHS---LIKDHHRKNPNPSSNSNPSLNPDFT-- 90
           T P+S+   P L P ETL+     S  F S   L+K        P++ +  +L   FT  
Sbjct: 45  TTPSSTTHHP-LPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNF 103

Query: 91  --------IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARP 142
                   I    LGF   +  ++I+   +  ++E +         L+++   +      
Sbjct: 104 HEIENLLKILENELGFKPDTNFYNIA---LNALVEDN--------KLKLVEMLHSKMVNE 152

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
             V     ++ +I    K  Q   A   ++ M +  ++    TF+ L++ ++  G    A
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDSLKDKFEPDVIVYTNLVRG 261
           +    +M  YGC    ++  ++++  C++ R  EA  F  +  ++ F PD + + +LV G
Sbjct: 213 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 272

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           +CR GN+++A  +   M   G  P+VYTY+ +I  +C+ G+  +A ++  +M+   C PN
Sbjct: 273 FCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPN 332

Query: 322 SITFNNLMRVHVKASRTEK-----------------------------------VLQVYN 346
           ++T+N L+    K +  E                                     ++++ 
Sbjct: 333 TVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE 392

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +MK  GC+ D  TY+ LID  C + +L++A+ +L  M   GC  NA  +N +   + K  
Sbjct: 393 EMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR 452

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +  A  ++ +M+ L    ++VTYN L+     +K  +   +L  +M    ++P+  TY 
Sbjct: 453 RIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYN 512

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            L+T +C +G    A   ++ M    C +P    Y  ++  L RAG++    +L+  +  
Sbjct: 513 SLLTYFCRVGDIEKAGDIVQTMASNGC-EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQM 571

Query: 527 RGFTARP 533
           +G    P
Sbjct: 572 KGIVLTP 578



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 195/396 (49%), Gaps = 5/396 (1%)

Query: 137 WVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYV 194
           +V    E   SPD   ++ ++N   ++   + A   +D M  +  +  V T++ L+    
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMC 309

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI 253
           + G   +A+    +M    C+P+ + ++ +IS LC++     A      L  K   PDV 
Sbjct: 310 KLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVC 369

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            +  L++G C + N   A  +F EMK  G +P+ +TYSI+ID+LC   ++  A  +  EM
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              GC  N++ +N L+    K+ R E   ++++QM+ LG    ++TYN LID  CK+ ++
Sbjct: 430 ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRV 489

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           E+A ++++ M+ +G  P+  T+N +     ++GD+  A  +   M    CEP+  TY  L
Sbjct: 490 EEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTL 549

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +     +   D+  KL + ++   +    + Y  +I             +  REM+ EK 
Sbjct: 550 IGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMM-EKS 608

Query: 494 LKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRG 528
             P +  +++V + L    G +Q+  +   +M+++G
Sbjct: 609 DPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKG 644


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 185/379 (48%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +++++    K + +    +    M+ R ++  +   +IL+  + + GL   A   F ++ 
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD I F+ +I  LC K +  +A  F D +    F  D I Y  L+ G C+ G   
Sbjct: 148 KMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  + + +    +QPNV  Y+ +ID++C+   +  A D+F+EM+  G  P+ +T++ L+
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALI 267

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  +    + ++N+M     + D  T+N L++  CKDGK+++   V + M+++G  
Sbjct: 268 SGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N +      + +VN A  ++  M      P+  +Y+I++  F   K  D  + L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEM    + P+V TY  LI      G  + A + + +M  ++ + P    Y  +L  L 
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM-HDRGVPPTIRTYNSILDALC 446

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +  Q+ K   L+ K+ D+G
Sbjct: 447 KIHQVDKAIALLTKLKDKG 465



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 192/385 (49%), Gaps = 2/385 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   KV +   A   +  +    V+  V  ++ ++    +  L  EA   F+ M 
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI 252

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +PD + +S +IS  C   + ++A   F+ +  +  +PDV  +  LV  +C+ G + 
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E + VF  M   GI+PN  TY+ ++D  C   ++ +A  +F  M + G  P+  +++ ++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  + ++ + ++ +M R     D +TY+ LID   K G++  A+++++ M  +G  
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+N I   + K+  V+ A  +  K+KD   +PN  TY+IL++    S   +   K+
Sbjct: 433 PTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKV 492

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + +       NV+TY I+I  +C  G +N A   + +M +  C+ P +  YE+++  L 
Sbjct: 493 FEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI-PDAKTYEIIILSLF 551

Query: 510 RAGQLQKHEELVEKMVDRGFTARPL 534
           +  +    E+L+ +M+ RG   R +
Sbjct: 552 KKDENDMAEKLLREMIARGVRPRQI 576



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 196/400 (49%), Gaps = 14/400 (3%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
           + +L   F QIS        T+ H + K    R  + LLQ +   +    +P  V    +
Sbjct: 181 VVALGFHFDQISYG------TLIHGLCKVGETRAALDLLQRV---DGNLVQPNVV----M 227

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   KV+  + A+     M S+ +   V T+S L+  +   G   +A+  FN+M 
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNIS 269
                PD   F+I+++  C+  +  E ++ FD  +K   +P+ + Y +L+ G+C    ++
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A+ +F  M   G+ P++ +YSI+I+  C+  +   A ++F EM      P+ +T+++L+
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K+ R    LQ+ +QM   G      TYN ++D  CK  +++ AI +L  +  KG  
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T++++ + + + G +  A +++  +       N  TY I++Q F      +  L L
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALAL 527

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
             +ME+N   P+  TY I+I         + A K +REMI
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 168/365 (46%), Gaps = 2/365 (0%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A    + +  RN       F+ ++   V++      ++   +ME  G  P+ +  +I+
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 225 ISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I+  C+      A S F   LK  + PD I +T L++G C  G I +A     ++   G 
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGF 186

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
             +  +Y  +I  LC+ G+   A D+   +     +PN + +N ++    K     +   
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           ++++M   G   D +TY+ LI   C  GKL DAI + N M+ +   P+  TFN++     
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G +     ++  M     +PN VTYN LM  +   K  +    +   M +  V P++ 
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +Y I+I  +C +  ++ A    +EM   K + P    Y  ++  L ++G++    +LV++
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEM-HRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 524 MVDRG 528
           M DRG
Sbjct: 426 MHDRG 430



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 1/240 (0%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  +YS           +  A  +F  +L     P +  FN ++   VK+     VL + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M+  G + + +  N LI+C C+ G +  A  V   +++ G  P+  TF  + + +   
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A   + K+  L    + ++Y  L+        T   L L + ++ N V+PNV  Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             +I   C +   N A+    EMI  K + P    Y  ++      G+L    +L  KM+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMI-SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 10/356 (2%)

Query: 180 EITVDTFSI--LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           E++ DTF+   ++  + R      A+  FN+M + GC P+ + +S +I+ LC   R +EA
Sbjct: 245 EMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEA 304

Query: 238 QSFFDSLKD----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
              FD +++       P     T  +   C  G   +A R+F +MK  G +PNVYTY+ +
Sbjct: 305 ---FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  LC  G +  A  +F  M   G  PN++T+N L+ + V+  R +    V N M R GC
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + +TYN +I  +C  G  + A+ V+N+M+++G + N  T+N I +     G+   A R
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M+D  C+P+  +Y  L+  F      +    L  EM ++ + PN  TY  LI  YC
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                + A   +  M    C +P    Y +++  L +       EEL + M++ G 
Sbjct: 542 KDEKLDTATSLLEHMKRSGC-RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 176/366 (48%), Gaps = 2/366 (0%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           ++ AW     MK++  E  V T++ L+     +G+   A+  F+RM   G  P+ + ++ 
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I+IL   RR   A    + + ++   P+++ Y  +++G+C  G+  +A  V   M   G
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
              N+ TY+ +I   C  G  T A  +   M + GC+P+  ++  L+    K S+ E   
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            ++N+M   G   + +TY  LID +CKD KL+ A  +L  M R GC PN  T+N++   +
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           +K  + +GA  +   M +    PN VTY  ++     + ST + L++  +M E    PN+
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  LI      G    A     E+ E   L P    Y  +++    +G+++     + 
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 523 KMVDRG 528
           +M+  G
Sbjct: 695 RMIKAG 700



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 183/395 (46%), Gaps = 37/395 (9%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F+D++    + + +  +S L+    R G+ A  +  ++RM   G  P+ + ++ VI+ LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +    ++A++    + + +  PD   YT+++ G CR  ++  A +VF +M   G +PN  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 289 TYSIVIDALCRCGQITRAHD-----------------------------------VFAEM 313
           TYS +I+ LC  G++  A D                                   +F +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              GCEPN  T+  L+     +   +  + ++++M R G   +T+TYN LI+   ++ ++
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           + A  VLN M R GC+PN  T+N + +    LGD   A  +   M       N VTYN +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++ +  S +T   L++   M +   +P+  +Y  LI  +C +    +A+    EM+++  
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG- 525

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           L P    Y  ++    +  +L     L+E M   G
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 173/385 (44%), Gaps = 4/385 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD +     + G  R+ DL  A    + M     E    T+S L+     +G   EA  
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M  +G  P     +  I  LC      +A   F  +K+K  EP+V  YT L+ G C
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +G +  A  +F  M   G+ PN  TY+ +I+ L    +I  A  V   M   GC PN +
Sbjct: 367 VSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N +++ +      +K + V N M + G  A+ +TYN +I  +C  G    A+++L+ M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC P+  ++  +     K+  +  A  ++ +M D    PN VTY  L+  +   +  
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D    L + M+ +   PNV TY +LI       +++ A +  + MIEE    P    Y  
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF-PNVVTYTA 605

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L + G      E+  KM+++G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQG 630



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 3/305 (0%)

Query: 229 CRKRRA-SEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           C  + A +   SF D L +      +  Y+ L+    R G  +     +  M   G+QPN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           +  Y+ VI+ALC+ G +  A  +  ++ E    P++ T+ +++  H +    +  LQV+N
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           QM + GCE +T+TY+ LI+  C  G++ +A  ++  M+  G  P A T       +  +G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
               A R++  MK+  CEPN  TY  L+     S    + + L   M  + V PN  TY 
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            LI +         A+  +  M    C  P    Y  +++     G  +K   ++  M+ 
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGC-SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 527 RGFTA 531
           RG +A
Sbjct: 454 RGHSA 458



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 186/438 (42%), Gaps = 32/438 (7%)

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
           +   HS +  T   +I+  C   +    L++L        +P+       Y E+I    K
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS----YTELICGFCK 507

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           + + + A+   + M    +     T++ L+  Y +      A      M+  GC P+   
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++++I  L ++   S A+     + ++   P+V+ YT ++ G C+ G+ S A  +F +M 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G  PN+ TYS +I AL + G++  A ++FAE+   G  P+ IT+  ++  ++ + + E
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 340 KVLQVYNQMKRLGCEADTITYNFLI-----DCHCKDGKL------------------EDA 376
                  +M + GC+    TY  LI     +    D +L                  +DA
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDA 747

Query: 377 IKVLNSMVRKGCNPNASTF--NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           + V+++ + +  +P  S    N +   +S  G    A+ + G M      P+   YN L+
Sbjct: 748 VSVMSAKLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL 806

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                 ++ D+ + + K M     E ++N Y+ LI   C + H     +   E +  +  
Sbjct: 807 CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL-HRRKEARITFENMLMRTW 865

Query: 495 KPGSSVYEMVLQQLRRAG 512
            P   V  +++  L R G
Sbjct: 866 NPDDVVQAVLIDGLLRDG 883



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 25/343 (7%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K   F  A     +M    +   V T++ ++    + G  + A+  FN+M 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+ + +S +I  L ++ +  EA++ F  L +    PD I Y  ++  +  +G + 
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL--------------------CRCGQITRAHDV 309
            A      M  AG QP ++TY ++I  L                    C  G  T   D 
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDA 747

Query: 310 F----AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
                A++ E+    +    N L+     A R  +  ++   M   G   D   YN L+ 
Sbjct: 748 VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 807

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              +   ++ A+ V   M  +GC  + + +  +   + +L     A   +  M      P
Sbjct: 808 SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 867

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + V   +L+         D+ ++    ME     P+ + Y IL
Sbjct: 868 DDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 95/245 (38%), Gaps = 25/245 (10%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS------ILCRKRRAS--- 235
           T+  ++  Y+ +G    A +   RM + GC P    + ++I       +L  +R A+   
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 731

Query: 236 --------------EAQSFFDSLKDKFEP--DVIVYTNLVRGWCRAGNISEAERVFREMK 279
                         +A S   +   + +P   V V   LV     AG   EA  +   M 
Sbjct: 732 VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 791

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G+ P+   Y+ ++ +L R   +  A  VF  M   GCE +   +  L+    +  R +
Sbjct: 792 SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           +    +  M       D +    LID   +DG  +  ++ L+ M  +   P+   + ++ 
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911

Query: 400 RCISK 404
           R  SK
Sbjct: 912 REASK 916


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 174/349 (49%), Gaps = 4/349 (1%)

Query: 147 SPDLYHE--MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+Y    +I   G + + D      + M ++  +  + T+  ++  +  AG   EA  
Sbjct: 132 SPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACD 191

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
            F +M + G  PD + ++I+I    +  +   A  F    K +   + + Y +L+    R
Sbjct: 192 IFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVG--KSRSFTNEVTYNSLLSSLGR 249

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G+I     +F +MK  G+  N  TY+I+I+ L   G++     ++ EM++   + + +T
Sbjct: 250 KGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVT 309

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            NN++    KA R E   +++  MK  G  ADT+TYN LI+   + GKL+ A  +L  M 
Sbjct: 310 INNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEME 369

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC PN  T+N +     K  +++ A R++ +MK+    PN V+Y+ L++ F  +  TD
Sbjct: 370 ENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTD 429

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
             + L +EM+     PN  TY +LI      G +  A +Y+REM +  C
Sbjct: 430 AAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGC 478



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 185/414 (44%), Gaps = 38/414 (9%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L++ +I++ G+    + A   +          T  T+S +++ +++ G     +  + +M
Sbjct: 32  LFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQM 91

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNI 268
            +    PD   F+I+I  L +  +  EA + F D  K    PDV  YT L+R     G I
Sbjct: 92  LKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRI 151

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
               ++F  M   G QPN++TY  V+ A    G++  A D+F +M++ G +P+++T+N L
Sbjct: 152 DAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNIL 211

Query: 329 MRVHVKASRTEK--------------------------------VLQVYNQMKRLGCEAD 356
           +    K  + E+                                +++++ QMK  G  ++
Sbjct: 212 IDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSN 271

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            +TY  LI+     G++ED  ++   MV      +  T N +  C+SK G V  A  ++ 
Sbjct: 272 ELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQ 331

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            MK      +TVTYNIL+     +   D    L  EMEEN   PN+ TY  LI+ Y   G
Sbjct: 332 DMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSY---G 388

Query: 477 HWNNAYKYIREMIE--EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            W+N     R  +E  E+ + P    Y  +++   +AG+      L  +M   G
Sbjct: 389 KWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEG 442



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 149/287 (51%), Gaps = 4/287 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+  GK  Q + A+ F+   +S   E+T ++   L+    R G     +  F +M+
Sbjct: 208 YNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNS---LLSSLGRKGDIQGLMELFGQMK 264

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G   +++ ++I+I  L    R  +  Q + + + +  + D++   N++    +AG + 
Sbjct: 265 AKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVE 324

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F++MK  G+  +  TY+I+I+ L R G++  A  +  EM E GC PN IT+N L+
Sbjct: 325 AAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLI 384

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K S      +++ +MK  G   + ++Y+ LI+   K G+ + AI +   M  +GC 
Sbjct: 385 SSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCP 444

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           PN  T+N++  C+ + G    A     +M+D  C+   VT ++L+++
Sbjct: 445 PNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRI 491



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 9/306 (2%)

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++++L   RR  + Q   +S+ KD+ + D  ++  L+  +  A  + +A +        G
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
            +P  YTYS +I    + G +     ++ +ML+    P+  TFN L+    KA + E+  
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            V+  M +L    D  TY  LI      G+++  +K+  SM  +GC PN  T++ +    
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL--KKEMEENEVEP 460
              G V+ A  ++ +M     +P+ VTYNIL+  F  +   +       K     NEV  
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEV-- 238

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
              TY  L++     G      +   +M + K L      Y +++++L  AG+++   +L
Sbjct: 239 ---TYNSLLSSLGRKGDIQGLMELFGQM-KAKGLVSNELTYAILIERLGWAGRVEDVWQL 294

Query: 521 VEKMVD 526
             +MVD
Sbjct: 295 YLEMVD 300


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 178/356 (50%), Gaps = 10/356 (2%)

Query: 183 VDTFSILVRRYVRAG-------LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
           V T+  L++     G       L  E ++  +R E   C P+ I ++I++  LC+  R  
Sbjct: 174 VVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE-INCKPNVITYNIIVDGLCKVGRED 232

Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA+  F+ +K +   P +I Y +L+ G+C AG   E++R+  EM   G+QP++ T++++I
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           D LC+ G++  A  +   M+E G  P+ +T+N+L+             +++  M   GCE
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 352

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D I+YN LI+ + K  K+E+A+K+ N M+  G  PN  T++ + + I   G V+ A ++
Sbjct: 353 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 412

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  MK      N+ TY I +     +      +KL  E++ +  +  +     LI   C 
Sbjct: 413 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 472

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            G    A++   ++  E   +P    Y +++    R GQ+ K   L++KM   G T
Sbjct: 473 AGKLETAWELFEKLSNEG-HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCT 527



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 205/425 (48%), Gaps = 43/425 (10%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +P L  ++ +++   K++ +   +   + M+   +     T +IL+          E   
Sbjct: 66  TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFA 125

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
           AF  +   G +P+ + ++ +I  LC + R SEA   F  + K    PDV+ Y  L++G C
Sbjct: 126 AFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 185

Query: 264 RAGNISEAERVFREM------KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
             GNI+ A ++ +EM           +PNV TY+I++D LC+ G+   A  +F EM   G
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P+ I++N+L+     A + E+  ++ ++M   G + D +T+N LID  CK+GK+ +A 
Sbjct: 246 MIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 305

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K+L  M+  G  P+  T+N +      +GD+N A  ++  M    CEP+ ++YN+L+  +
Sbjct: 306 KLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY 365

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTY----------------RILITMYCGMGHWNNA 481
           + +   +  +KL  EM      PNV TY                + L ++    G   N+
Sbjct: 366 SKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENS 425

Query: 482 YKY---IREMIEEKCL--------KPGSSVYEMVLQQLR-------RAGQLQKHEELVEK 523
           Y Y   +  + +  CL        +  SS +++ ++ L        +AG+L+   EL EK
Sbjct: 426 YTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEK 485

Query: 524 MVDRG 528
           + + G
Sbjct: 486 LSNEG 490



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 188/383 (49%), Gaps = 7/383 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   KV + D A    + MK++ +  ++ +++ L+  +  AG   E+    + M 
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEML 277

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD + F+++I  LC++ +  EA+     + +    PD++ Y +L+ G+C  G+++
Sbjct: 278 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN 337

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  M   G +P+V +Y+++I+   +  ++  A  ++ EML VG  PN IT+++L+
Sbjct: 338 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 397

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +    A + +   ++++ MK  G   ++ TY   +D  CK+  L +A+K+   +      
Sbjct: 398 KGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFK 457

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
                 N +   + K G +  A  ++ K+ +   EPN VTY I++  F      D    L
Sbjct: 458 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVL 517

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            ++ME N   P++ TY  L+  +          + +  M  +K + P +    +V+  L 
Sbjct: 518 IQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM-AQKDVSPDAITCSIVVDMLS 576

Query: 510 RAGQLQKHEEL-----VEKMVDR 527
           +  + Q+   L     ++K VD+
Sbjct: 577 KDEKYQECLHLLPRFPIQKGVDK 599



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 148/302 (49%), Gaps = 8/302 (2%)

Query: 234 ASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           A+ A  FF   ++    P +  + +L+ G  +  + S+   ++ +M+++G+  +  T +I
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++ LC   ++      FA +L  G  PN +T+N L++      R  +  +++ +M++LG
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKV----LNSMVRK--GCNPNASTFNMIFRCISKLG 406
           C  D +TY  LI   C  G +  A+K+    LN + R    C PN  T+N+I   + K+G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
             + A +++ +MK     P+ ++YN L+  F  +   +   +L  EM +  ++P++ T+ 
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +LI   C  G    A K +  MIE   + P    Y  +++     G L    EL   M  
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESG-IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 348

Query: 527 RG 528
           +G
Sbjct: 349 KG 350



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 123/240 (51%), Gaps = 9/240 (3%)

Query: 298 CRCGQITRAHDV--FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           C+ G +T  H +  F  M+     P+  +FN+L+    K     +V  +YNQM+  G  +
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D  T N L++C C   +L +       ++R+G +PN  T+N + + +     ++ A R++
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM------EENEVEPNVNTYRILI 469
            +M+ L C P+ VTY  L++    + + ++ LKL +EM       E   +PNV TY I++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              C +G  + A +   EM + + + P    Y  ++     AG+ ++ + L+++M+D+G 
Sbjct: 223 DGLCKVGREDEAKQLFEEM-KTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGL 281


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 2/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F D M S  V   V T++IL+R     G   EA+     M   GC P+ + ++ +++
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 193

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              R      A+     + D   +P+++ + ++V G C+AG + +A +VF EM   G+ P
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP 253

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  +Y+ ++   C+ G    A  VFAEM + G  P+ +TF +L+ V  KA   E  + + 
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLV 313

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            QM+  G + + +T+  LID  CK G L+DA+  +  M +    P+   +N +      +
Sbjct: 314 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMV 373

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G ++ A  +  +M+    +P+ VTY+ ++  +  +  T    +L ++M E  V P+  TY
Sbjct: 374 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 433

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI + C     ++A+   + MI+   L+P    Y  ++    + G +++   L +KMV
Sbjct: 434 SSLIRVLCEEKRLSDAHVLFKNMIKLG-LQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492

Query: 526 DRG 528
             G
Sbjct: 493 KAG 495



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 162/317 (51%), Gaps = 3/317 (0%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEA 271
           G  P  +A++ V+  L      S A+ FFDS L D   P+V  Y  L+R  C  G+  EA
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             + R+M+ AG  PNV TY+ ++ A  R G++  A  +   ML+ G +PN +TFN+++  
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             KA + E   +V+++M R G   D ++YN L+  +CK G   +A+ V   M +KG  P+
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             TF  +   + K G++  A  +  +M++   + N VT+  L+  F      D  L   +
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            M +  ++P+V  Y  LI  YC +G  + A + + EM E K LKP    Y  ++    + 
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM-EAKGLKPDVVTYSTIISAYCKN 408

Query: 512 GQLQKHEELVEKMVDRG 528
                  EL ++M+++G
Sbjct: 409 CDTHSAFELNQQMLEKG 425



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 186/416 (44%), Gaps = 57/416 (13%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ M+N   K  + + A    D M    +     +++ LV  Y +AG + EA+  F  M 
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 282

Query: 211 EYGCAPDKIAFSIVISILC---------------RKRRASEAQSFFDSLKDKF------- 248
           + G  PD + F+ +I ++C               R+R     +  F +L D F       
Sbjct: 283 QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 342

Query: 249 --------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                         +P V+ Y  L+ G+C  G + EA  +  EM+  G++P+V TYS +I
Sbjct: 343 DALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 402

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
            A C+      A ++  +MLE G  P++IT+++L+RV  +  R      ++  M +LG +
Sbjct: 403 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQ 462

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D  TY  LID HCK+G +E A+ + + MV+ G  P+  T++++   +SK      A ++
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             K+   +  P    Y+ LM     ++   ++  LK                     +C 
Sbjct: 523 LFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKG--------------------FCM 562

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            G  N A K  + M++      G SVY +++    RAG + K     ++M+ RGF 
Sbjct: 563 KGLMNEADKVYQSMLDRNWNLDG-SVYSVLIHGHCRAGNVMKALSFHKQMLQRGFA 617



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 203/431 (47%), Gaps = 21/431 (4%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I   CG  H    L +L         P  V     Y+ ++    +  + D A   + +M
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVT----YNTLVAAFFRAGEVDGAERLVGMM 211

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
               ++  + TF+ +V    +AG   +A   F+ M   G APD ++++ ++   C+   +
Sbjct: 212 LDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCS 271

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA S F  +  K   PDV+ +T+L+   C+AGN+  A  + R+M+  G+Q N  T++ +
Sbjct: 272 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTAL 331

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID  C+ G +  A      M +   +P+ + +N L+  +    R ++  ++ ++M+  G 
Sbjct: 332 IDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 391

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           + D +TY+ +I  +CK+     A ++   M+ KG  P+A T++ + R + +   ++ AH 
Sbjct: 392 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHV 451

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  M  L  +P+  TY  L+       + +  L L  +M +  V P+V TY +LI    
Sbjct: 452 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLS 511

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA---------------GQLQKHE 518
                  A + + ++  E+ + P ++ Y+ ++   R+A               G + + +
Sbjct: 512 KSARAMEAQQLLFKLYHEEPI-PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 570

Query: 519 ELVEKMVDRGF 529
           ++ + M+DR +
Sbjct: 571 KVYQSMLDRNW 581



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 154/328 (46%), Gaps = 18/328 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN    V + D A   +  M+++ ++  V T+S ++  Y +      A     +M 
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD I +S +I +LC ++R S+A   F ++ K   +PD   YT+L+ G C+ GN+ 
Sbjct: 423 EKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 482

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +  +M  AG+ P+V TYS++I+ L +  +   A  +  ++      P +  ++ LM
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542

Query: 330 RVHVKASRTEKVLQVYNQ--MKRLGCEADTI--------------TYNFLIDCHCKDGKL 373
               KA   + VL +     MK L  EAD +               Y+ LI  HC+ G +
Sbjct: 543 HCCRKA-ELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNV 601

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A+     M+++G  PN+++   + R + + G V  A ++  ++ +     +      L
Sbjct: 602 MKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKAL 661

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + +     + D VL +   M ++ + P+
Sbjct: 662 IDLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 192/373 (51%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L GKV +   A  F D + +    +   T+ IL+    + G    A+    ++E      
Sbjct: 135 LNGKVNE---ALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNT 191

Query: 217 DKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + +S +I  LC+ +  ++A   + + +  +  P V+ +++L+ G+C  G   +A R+F
Sbjct: 192 NVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLF 251

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM M  I P+ YT++I++DALC+ G+I  A +V A M++ G EP  +T+N LM  +   
Sbjct: 252 NEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLV 311

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
           +   K   V + + R+    ++ +YN +I+  CK   +++A+ + + M  +G  P+  T+
Sbjct: 312 NEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTY 371

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + K G +  A  +  +M +     + VTYN L+ +F  ++  D  + L K+++E
Sbjct: 372 NSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKE 431

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
           + ++PN+ TY ILI   C  G   NA    ++++  K     +  Y +++  L + G   
Sbjct: 432 HGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLL-IKGYNVNAWTYNIMINGLCKEGLFD 490

Query: 516 KHEELVEKMVDRG 528
           + E L+ KM D G
Sbjct: 491 EAEVLLSKMEDNG 503



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 160/341 (46%), Gaps = 1/341 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K +    A+     M  + +  TV TFS L+  +   G   +A   FN M
Sbjct: 195 MYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEM 254

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
                 PD   F+I++  LC++ +  EA++    + K+  EP V+ Y  L+ G+C    +
Sbjct: 255 VMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEV 314

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A+ V   +    + PN  +Y+I+I+  C+   +  A  +F EM   G  P+ +T+N+L
Sbjct: 315 GKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSL 374

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    KA R     ++ ++M      AD +TYN LID  CK+  ++ AI ++  +   G 
Sbjct: 375 IDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI 434

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN  T+N++   + K G +  A  ++  +       N  TYNI++         D    
Sbjct: 435 QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEV 494

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           L  +ME+N + P+  TY  +I           A K +REM+
Sbjct: 495 LLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMV 535



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 178/392 (45%), Gaps = 51/392 (13%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+S+ V+  + T SIL+  Y   G    A   F ++ + G              LC   +
Sbjct: 93  MESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMG--------------LCLNGK 138

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            +EA  F D  L   F  + + Y  L+ G C+ G    A +V R+++   +  NV  YS 
Sbjct: 139 VNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYST 198

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID LC+   +T A+ +++EM+     P  +TF++L+       + +   +++N+M    
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D  T+N L+D  CK+GK+++A  V+  M+++G  P   T+N +      + +V  A 
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAK 318

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL------------------------- 447
            +   +  ++  PN+ +YNI++  F   K  D  L                         
Sbjct: 319 HVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGL 378

Query: 448 ----------KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                     +L  EM  N +  ++ TY  LI ++C   H + A   +++ I+E  ++P 
Sbjct: 379 CKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKK-IKEHGIQPN 437

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              Y +++  L + GQL+  +++ + ++ +G+
Sbjct: 438 MCTYNILIDGLCKGGQLKNAQDVFQDLLIKGY 469



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 124/238 (52%), Gaps = 1/238 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++    V +   A H + ++    V     +++I++  + +  +  EA+  F+ M 
Sbjct: 301 YNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMC 360

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNIS 269
             G AP K+ ++ +I  LC+  R   A    D + +   P D++ Y +L+  +C+  ++ 
Sbjct: 361 CRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVD 420

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  + +++K  GIQPN+ TY+I+ID LC+ GQ+  A DVF ++L  G   N+ T+N ++
Sbjct: 421 KAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMI 480

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
               K    ++   + ++M+  G   D +TY  +I       + E A K+L  MV KG
Sbjct: 481 NGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG 538



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/241 (20%), Positives = 105/241 (43%), Gaps = 23/241 (9%)

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           F  M ++   P+ + FN ++   +K  +    VL +  QM+  G + D  T + LI+C+C
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNAS---------------------TFNMIFRCISKLGD 407
             G++  A  V   +++ G   N                       T+ ++   + K+G 
Sbjct: 114 HLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQ 173

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
              A ++  +++      N V Y+ ++      K       L  EM    + P V T+  
Sbjct: 174 TRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSS 233

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI  +C +G + +A++   EM+  K + P +  + +++  L + G++++ + ++  M+  
Sbjct: 234 LIYGFCIVGKFKDAFRLFNEMV-MKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKE 292

Query: 528 G 528
           G
Sbjct: 293 G 293



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 3/143 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I++  K +  D A   +  +K   ++  + T++IL+    + G    A   F  + 
Sbjct: 406 YNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLL 465

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G   +   ++I+I+ LC++    EA+     ++D    PD + Y  +++         
Sbjct: 466 IKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENE 525

Query: 270 EAERVFREMKMAGIQPNVYTYSI 292
           +A+++ REM + G+   VY + I
Sbjct: 526 KAQKLLREMVIKGVV--VYAFEI 546



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYN-ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           V+ A   + +M+ ++  P+ V +N IL  +  T      VL L  +ME   V+P++ T  
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 467 ILITMYCGMGHWNNAYKYIREMIE 490
           ILI  YC +G    A+    ++++
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILK 130


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 181/371 (48%), Gaps = 30/371 (8%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           +I V +F+   R    AG   +A      M   G  PD   +S V+  LC   +   A  
Sbjct: 448 KINVSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFL 504

Query: 240 FFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
            F+ +K      DV  YT +V  +C+AG I +A + F EM+  G  PNV TY+ +I A  
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA--- 355
           +  +++ A+++F  ML  GC PN +T++ L+  H KA + EK  Q++ +M    C +   
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERM----CGSKDV 620

Query: 356 ------------------DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
                             + + Y  L+D  CK  ++E+A K+L++M  +GC PN   ++ 
Sbjct: 621 PDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDA 680

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + K+G ++ A  +  +M +        TY+ L+  +   K  D+  K+  +M EN 
Sbjct: 681 LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 740

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
             PNV  Y  +I   C +G  + AYK + +M+EEK  +P    Y  ++    R G+++  
Sbjct: 741 CAPNVVIYTEMIDGLCKVGKTDEAYK-LMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETC 799

Query: 518 EELVEKMVDRG 528
            EL+E+M  +G
Sbjct: 800 LELLERMGSKG 810



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 176/365 (48%), Gaps = 22/365 (6%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+     Y +++       + +LA+   + MK   +   V T++I+V  + +AGL  +A 
Sbjct: 479 FIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
             FN M E GC P+ + ++ +I    + ++ S A   F++ L +   P+++ Y+ L+ G 
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 263 CRAGNISEAERVFREMKMAGIQ-------------------PNVYTYSIVIDALCRCGQI 303
           C+AG + +A ++F   +M G +                   PNV  Y  ++D  C+  ++
Sbjct: 599 CKAGQMEKACQIFE--RMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRV 656

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +   M   GCEPN I ++ L+    K  + ++  +V  +M   G  A   TY+ L
Sbjct: 657 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSL 716

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID + K  + + A KVL+ M+   C PN   +  +   + K+G  + A+++   M++  C
Sbjct: 717 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 776

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +PN VTY  ++  F      +  L+L + M    V PN  TYR+LI   C  G  + A+ 
Sbjct: 777 QPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 836

Query: 484 YIREM 488
            + EM
Sbjct: 837 LLEEM 841



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 176/412 (42%), Gaps = 25/412 (6%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y ++I+   +   F+ A  F++ M++ +    V T+S L+   +         
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
              N M   GC P    F+ ++   C     S A      + K    P  +VY  L+   
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSI 417

Query: 263 CRAGN------ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           C   +      +  AE+ + EM   G+  N    S     LC  G+  +A  V  EM+  
Sbjct: 418 CGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P++ T++ ++     AS+ E    ++ +MKR G  AD  TY  ++D  CK G +E A
Sbjct: 478 GFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-- 434
            K  N M   GC PN  T+  +     K   V+ A+ ++  M    C PN VTY+ L+  
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 435 ---------------QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
                          +M  +    D+ +  K+  ++N   PNV  Y  L+  +C +    
Sbjct: 598 HCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVE 657

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            A K +  M  E C +P   VY+ ++  L + G+L + +E+  +M + GF A
Sbjct: 658 EARKLLDAMSMEGC-EPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPA 708



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/442 (22%), Positives = 181/442 (40%), Gaps = 50/442 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           V+SFF W   +  + H+  +Y+ +++L  +     +    +  ++  + E+  +  ++LV
Sbjct: 148 VISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLV 207

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI----------------------- 227
           R+Y R+G  + A+    R++++   P +  ++ +I                         
Sbjct: 208 RKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLR 267

Query: 228 ------------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
                       LC+  +  EA +  ++  + F PD + YT L+ G C A    EA    
Sbjct: 268 MDGFTLRCYAYSLCKVGKWREALTLMET--ENFVPDTVFYTKLISGLCEASLFEEAMDFL 325

Query: 276 REMKMAGIQPNVYTYSIVIDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
             M+     PNV TYS +   LC C    Q+ R   V   M+  GC P+   FN+L+  +
Sbjct: 326 NRMRATSCLPNVVTYSTL---LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRK 386
             +       ++  +M + G     + YN LI   C D        LE A K  + M+  
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLAT 442

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N    +   RC+   G    A  +  +M      P+T TY+ ++     +   ++ 
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELA 502

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L +EM+   +  +V TY I++  +C  G    A K+  EM E  C  P    Y  ++ 
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC-TPNVVTYTALIH 561

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
              +A ++    EL E M+  G
Sbjct: 562 AYLKAKKVSYANELFETMLSEG 583



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 23/381 (6%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           + LM++ N       ++ L+     A L  EA+   NRM    C P+ + +S ++     
Sbjct: 290 LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 231 KRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           K++    +   + +  +   P   ++ +LV  +C +G+ S A ++ ++M   G  P    
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVV 409

Query: 290 YSIVIDALC------RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           Y+I+I ++C       C  +  A   ++EML  G   N I  ++  R    A + EK   
Sbjct: 410 YNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFS 469

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           V  +M   G   DT TY+ ++   C   K+E A  +   M R G   +  T+ ++     
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G +  A + + +M+++ C PN VTY  L+  +  +K      +L + M      PN+ 
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589

Query: 464 TYRILITMYCGMGHWNNAYK----------------YIREMIEEKCLKPGSSVYEMVLQQ 507
           TY  LI  +C  G    A +                Y ++  ++   +P   +Y  +L  
Sbjct: 590 TYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDG 649

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
             +  ++++  +L++ M   G
Sbjct: 650 FCKLHRVEEARKLLDAMSMEG 670



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 147/344 (42%), Gaps = 44/344 (12%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSP 148
           +P + + F Q    +S  P+ V +  +++  C +       ++L   +     P  +   
Sbjct: 620 VPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQI--- 676

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
            +Y  +I+   KV + D A      M       T+ T+S L+ RY +      A    ++
Sbjct: 677 -VYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 735

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
           M E  CAP+ + ++ +I  LC+  +  EA      +++K  +P+V+ YT ++ G+ R G 
Sbjct: 736 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGK 795

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML------------- 314
           I     +   M   G+ PN  TY ++ID  C+ G +  AH++  EM              
Sbjct: 796 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855

Query: 315 -----------------EVGCEPNSITFNNLMRVHV----KASRTEKVLQVYNQMKRLGC 353
                            E+G + ++  F +L R+ V    KA R E  L++  ++     
Sbjct: 856 VIEGFNKEFIESLGLLDEIG-QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSA 914

Query: 354 EA--DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
                + TYN LI+  C   K++ A ++ + M +KG  P   TF
Sbjct: 915 TLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTF 958



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 110/242 (45%), Gaps = 5/242 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y EMI+   KV + D A+  + +M+ +  +  V T++ ++  + R G     +    RM
Sbjct: 747 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERM 806

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD-VIVYTNLVRGWCRAGNI 268
              G AP+ + + ++I   C+      A +  + +K    P     Y  ++ G+ +    
Sbjct: 807 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK--EF 864

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE--PNSITFN 326
            E+  +  E+      P +  Y +++D L +  ++  A  +  E+          S T+N
Sbjct: 865 IESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 924

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +L+     A++ +K  +++++M + G   +  T+  LI    ++ K+ +A+ +L+ +   
Sbjct: 925 SLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHM 984

Query: 387 GC 388
            C
Sbjct: 985 VC 986


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 165/358 (46%), Gaps = 5/358 (1%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M+   V+  V T+++L+R   +      A    + M   GC PD+++   ++S +C+ 
Sbjct: 93  DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 152

Query: 232 RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
            R  EA+ F      +  P    Y  +V   C    + E   V  EM   G+QPNV TY+
Sbjct: 153 GRVEEARGFLA----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 208

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            ++DA C+  ++  A  + A M+ +GC PN +TF  L++   +  +    L +++ M   
Sbjct: 209 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 268

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G    TI+YN LI   C  G L+ A+   NSM R    PNA+T++ +    S  GD++GA
Sbjct: 269 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 328

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ +MK   C+PN V Y  ++ +       D    L  +M  +   PN  T+  LI  
Sbjct: 329 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 388

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            C  G    A      M    C  P    Y  +L  L R G  +    +V +M++ GF
Sbjct: 389 LCDCGRVGRALNVFHGMRRNGC-HPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGF 445



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 178/359 (49%), Gaps = 2/359 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K R+  +A   +  M S      V TF+ LV+ +   G   +A+  ++ M 
Sbjct: 207 YTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMV 266

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + G AP  I+++++I  LC       A  FF+S+K +   P+   Y+ LV G+  AG++ 
Sbjct: 267 DEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLD 326

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  ++ EMK +G +PNV  Y+ +ID LC+     +A  +  +ML   C PN++TFN L+
Sbjct: 327 GAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI 386

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  R  + L V++ M+R GC  +  TYN L+    ++G  +DA  ++  M+  G  
Sbjct: 387 GRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFE 446

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +  T+N +  C+ ++     A  + G+M     +P+  T+N ++  +       +   L
Sbjct: 447 LSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACL 506

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
             +M       NV  Y ILI+  C  G  +NA  Y+ +M+ E  + P  + + ++++ +
Sbjct: 507 LGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG-ICPNEATWNVLVRAI 564



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 175/375 (46%), Gaps = 5/375 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+ R +++ +  ++ M  R ++  V T++ +V  + +A     A     RM   GC P
Sbjct: 179 LCGEFRMWEV-FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTP 237

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + F+ ++       +  +A S +  + D+ + P  I Y  L+RG C  G++  A   F
Sbjct: 238 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 297

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             MK   + PN  TYS ++D     G +  A  ++ EM   GC+PN + + N++ V  K 
Sbjct: 298 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 357

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              ++   + ++M    C  +T+T+N LI   C  G++  A+ V + M R GC+PN  T+
Sbjct: 358 MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 417

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + + G+   A  M  +M +   E + VTYN ++            + L   M  
Sbjct: 418 NELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 477

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQLRRAGQL 514
             ++P+  T+  +I  YC  G  + A   + +M    C  P + V Y +++ +L   G+L
Sbjct: 478 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNC--PRNVVAYTILISELCNQGKL 535

Query: 515 QKHEELVEKMVDRGF 529
                 + KM+  G 
Sbjct: 536 SNAMVYLLKMLYEGI 550



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 7/267 (2%)

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC-EPNSI 323
           AG++   +   +EM++ G+          I A  R G   RA   F    ++GC +P   
Sbjct: 11  AGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVR 70

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +N+L+   ++ +    V+ VY+ M++ G + +  TYN LI   C++ +++ A K+L+ M
Sbjct: 71  VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 130

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            RKGC+P+  +   I   + KLG V  A     +       P   +YN ++         
Sbjct: 131 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRM 185

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
             V  +  EM +  ++PNV TY  ++  +C       A   +  M+   C  P    +  
Sbjct: 186 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGC-TPNVLTFTA 244

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +++     G++     +   MVD G+ 
Sbjct: 245 LVKGFFEDGKVHDALSMWHWMVDEGWA 271



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 37/274 (13%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  MI++  K   FD A   ID M   N      TF+ L+ R    G    A++ F+ M
Sbjct: 346 VYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGM 405

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
              GC P+   ++ ++  L R+    +A +   + L + FE  ++ Y  ++   C+    
Sbjct: 406 RRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMR 465

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  +   M + GIQP+ +T++ +I A C+ G+++ A  +  +M  V C  N       
Sbjct: 466 KHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN------- 518

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                                        + Y  LI   C  GKL +A+  L  M+ +G 
Sbjct: 519 ----------------------------VVAYTILISELCNQGKLSNAMVYLLKMLYEGI 550

Query: 389 NPNASTFNMIFRCI-SKLGDVNGAHRMYGKMKDL 421
            PN +T+N++ R I + +G +   H     ++DL
Sbjct: 551 CPNEATWNVLVRAIFTNIGTIGPIHLFKYIVEDL 584


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 166/337 (49%), Gaps = 3/337 (0%)

Query: 143 EFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           ++ + P++Y   I + G  +  D+  A    D +  R +  +V +F+ L+  Y R+    
Sbjct: 219 DYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE 278

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
           E     + ME    +PD   +S +I+ LC++ R  EA   FD + +    P+ + +T L+
Sbjct: 279 EGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLI 338

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C+ G I  A R F  MK  GI+P++ TY+ +I+ LCR G +  A  +  EM+  G +
Sbjct: 339 DGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFK 398

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ ITF  LM    K    +  L++ ++M   G E D + +  LI   C+DG++ DA ++
Sbjct: 399 PDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERM 458

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L  M+  G  P+  T+ M+  C  K GDV    ++  +M+     P  VTYN LM  F  
Sbjct: 459 LKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCK 518

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
                    L   M   EV PN  T+ IL+  +C  G
Sbjct: 519 QGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 228/514 (44%), Gaps = 57/514 (11%)

Query: 59  ISEKFHSLIKDHHRKNPNPSSNSNPSL------------------NPDFTIPSLSLGFSQ 100
           ISE  +++    H  NPNP  + NP+L                  NP  ++P LSL FS 
Sbjct: 32  ISESINTI----HNNNPNPDYSLNPTLKRILPSLTSHHITNLINLNP-LSLPPLSL-FSF 85

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIP----LLQVLSFFNWVTARPEFV----------- 145
            +   S  P   RH +     + H +     L Q  S F ++ ++               
Sbjct: 86  FNYLASRPP--FRHTLHNYSTMAHFLSSHNLLSQTHSLFLFIISKMGHHSSTSLISSLIQ 143

Query: 146 ---------HSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA 196
                    HS  ++  +I         + A   + L+K  N  I V     L+RR ++ 
Sbjct: 144 TVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMK- 202

Query: 197 GLAAEAVHAFN---RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
            L  +  H +     + +YG  P+   F+I++   C+      A+  FD +  +   P V
Sbjct: 203 -LNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSV 261

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + +  L+ G+CR+ N+ E   +   M+   I P+V+TYS +I+ LC+  ++  A+ +F E
Sbjct: 262 VSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDE 321

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M E+G  PN +TF  L+    K  + +  L+ +  MK  G   D ITYN LI+  C+DG 
Sbjct: 322 MCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD 381

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           L++A K+LN M+  G  P+  TF  +     K GD++ A  +  +M +   E + V +  
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+             ++ K+M     +P+  TY ++I  +C  G      K ++EM  + 
Sbjct: 442 LISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG 501

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            + PG   Y  ++    + GQ++  + L+  M++
Sbjct: 502 RV-PGVVTYNALMNGFCKQGQMKNAKMLLHAMLN 534



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 2/233 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +I+   K  + DLA    ++MK R +   + T++ L+    R G   EA    N M 
Sbjct: 334 FTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMI 393

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PDKI F+ ++   C+      A    D + ++  E D + +T L+ G CR G + 
Sbjct: 394 GNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVR 453

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +AER+ ++M  AG +P+  TY++VID  C+ G +     +  EM   G  P  +T+N LM
Sbjct: 454 DAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALM 513

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
               K  + +    + + M  +    + IT+N L+D HCK G   D  K+ N 
Sbjct: 514 NGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FKIFNG 565



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 1/187 (0%)

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           + Y ++   G   +   +N L+   CK G + +A  V + + R+G  P+  +FN +    
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            +  +V     +   M+  +  P+  TY+ L+         +    L  EM E  + PN 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            T+  LI   C  G  + A +   E+++++ ++P    Y  ++  L R G L++  +L+ 
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNF-EIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLN 390

Query: 523 KMVDRGF 529
           +M+  GF
Sbjct: 391 EMIGNGF 397


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 196/391 (50%), Gaps = 8/391 (2%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P  VH+   Y  +++   + R+ DL       +    ++I   T S L++    A    E
Sbjct: 154 PLTVHT---YSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210

Query: 202 AVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTN 257
           AV+   +RM E GC P+  ++SI++  LC    +  A   F  +  +     P+V+ Y  
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++ G+ + G   +A  +F EM   G++P+V TY+++IDALC+   + +A  V  +M   G
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
            +P+++T+N ++  +    R ++  +++ +MK  G   + +  N  +   CK G+ ++A 
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           ++ +SM  KG  P+  ++  +    +  G       ++  MK      +   +NIL+  +
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
           A     D  + +  EM++  V P+V TY  +I+ +  MG   +A +   +M+  + ++P 
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV-ARGIQPN 509

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++VY  ++Q     G L K +ELV +M+++G
Sbjct: 510 TAVYHSIIQGFCMHGGLVKAKELVSEMINKG 540



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 186/387 (48%), Gaps = 5/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+   K R  D A   +  M +   +    T++ ++  Y   G   EA   
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKM 357

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F +M+  G  P+ +  +  ++ LC+  R+ EA   FDS+  K  +PD++ Y  L+ G+  
Sbjct: 358 FRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYAS 417

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G  ++   +F  MK  GI  +   ++I+I A  + G +  A  +F EM + G  P+ +T
Sbjct: 418 EGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ ++    +  R    ++ +NQM   G + +T  Y+ +I   C  G L  A ++++ M+
Sbjct: 478 YSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMI 537

Query: 385 RKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            KG   P+   FN +   + K G V  AH ++  + D+   P+ +T+  L+  +      
Sbjct: 538 NKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKM 597

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   K+   ME   VE ++ TY  L+  Y   G  N+     REM + K +KP +  Y +
Sbjct: 598 DKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREM-QRKGVKPNTVTYGI 656

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +L  L RAG+     +   +M++ G T
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTT 683



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 196/402 (48%), Gaps = 16/402 (3%)

Query: 135 FNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDL------MKSRNVEITVDTFSI 188
           F+ +TA+    H PD+      L G   +    W F D+      MKS  +      F+I
Sbjct: 393 FDSMTAKG---HKPDIVSYCTLLHGYASE---GW-FADMIGLFNSMKSNGIAADCRVFNI 445

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           L+  Y + G+  +A+  F  M++ G +PD + +S VIS   R  R ++A   F+ +  + 
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRA 306
            +P+  VY ++++G+C  G + +A+ +  EM   GI +P++  ++ VI++LC+ G++  A
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA 565

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           HD+F  + ++G  P+ ITF +L+  +    + +K  ++ + M+ +G E D +TY+ L+D 
Sbjct: 566 HDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDG 625

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           + K+G++ D + +   M RKG  PN  T+ ++   + + G    A + + +M +      
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
              Y I++     +   D  + L +++    V+ ++     +I     +     A K + 
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA-KELF 744

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             I    L P  S Y +++  L + G ++    +   M   G
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSG 786



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 171/350 (48%), Gaps = 5/350 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYG--CAPDKIAFSIVISILCRKRRASEAQSF 240
           V ++SI+++      ++  A+  F  M + G  C+P+ +A++ VI    ++    +A S 
Sbjct: 228 VFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSL 287

Query: 241 FDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F  + +   +PDV+ Y  ++   C+A  + +AE V R+M   G QP+  TY+ +I     
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYAT 347

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G++  A  +F +M   G  PN +  N+ +    K  R+++  ++++ M   G + D ++
Sbjct: 348 LGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVS 407

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y  L+  +  +G   D I + NSM   G   +   FN++    +K G V+ A  ++ +M+
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ 467

Query: 420 DLKCEPNTVTYNILMQMFA-TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
                P+ VTY+ ++  F+   + TD + K   +M    ++PN   Y  +I  +C  G  
Sbjct: 468 QQGVSPDVVTYSTVISAFSRMGRLTDAMEKF-NQMVARGIQPNTAVYHSIIQGFCMHGGL 526

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             A + + EMI +   +P    +  V+  L + G++    ++ + + D G
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIG 576



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 171/379 (45%), Gaps = 5/379 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I+   ++ +   A    + M +R ++     +  +++ +   G   +A  
Sbjct: 472 SPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKE 531

Query: 205 AFNRMEEYGCA-PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGW 262
             + M   G   PD + F+ VI+ LC+  R  +A   FD + D  E PDVI +T+L+ G+
Sbjct: 532 LVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGY 591

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G + +A ++   M++ G++ ++ TYS ++D   + G+I     +F EM   G +PN+
Sbjct: 592 CLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNT 651

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+  ++    +A RT    + +++M   G       Y  ++   C++   ++AI +   
Sbjct: 652 VTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQK 711

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +       + +  N +   + K+     A  ++  +      PN  TY +++       +
Sbjct: 712 LGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGA 771

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +    +   ME++ + P       +I M    G    A  Y+ ++  ++ L   S+   
Sbjct: 772 VEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTT-S 830

Query: 503 MVLQQLRRAGQLQKHEELV 521
           ++L    R G+  +  +L+
Sbjct: 831 LMLSLFSRKGKYHEDMKLL 849



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 128/260 (49%), Gaps = 5/260 (1%)

Query: 273 RVFREMKMAGIQP-NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           RV RE     + P  V+TYSI++D  CR  +      +F  +L  G + + IT + L++ 
Sbjct: 142 RVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKC 201

Query: 332 HVKASRTEKVLQV-YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--C 388
              A+RTE+ + V  ++M  LGC  +  +Y+ ++   C +   + A+ +   M ++G  C
Sbjct: 202 LCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGAC 261

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +PN   +N +     K G+   A  ++ +M     +P+ VTYN+++     +++ D    
Sbjct: 262 SPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + ++M  N  +P+  TY  +I  Y  +G    A K  R+M + + L P   +    L  L
Sbjct: 322 VLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKM-KSRGLIPNIVICNSFLASL 380

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            + G+ ++  E+ + M  +G
Sbjct: 381 CKHGRSKEAAEIFDSMTAKG 400


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 199/409 (48%), Gaps = 16/409 (3%)

Query: 125 GIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD 184
           G  +L +L+ F  ++      HS  L+   I+  G +  F+       +++ +    TVD
Sbjct: 14  GTQMLSLLAHF--LSLSHNRFHSKSLHFNTID--GAISSFN------RMLRMQPPPSTVD 63

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA--SEAQSFFD 242
            F+ L+    +    +  +   ++M+ +G  P+     I+I+  C   R    EA   FD
Sbjct: 64  -FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFD 122

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  + F PDV+ Y  L+ G C+ GN S A R+   M     QPNV+ Y+ +ID+LC+  
Sbjct: 123 KMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDR 182

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           Q+T A ++F+EM+  G  P+  T+N+L+         + V  + N+M       D +++N
Sbjct: 183 QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 242

Query: 362 FLIDCHCKDGKLEDAIKVLNSMV-RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
            ++D  CK+GK+ +A  V++ M+ R GC PN  ++N +     K+  ++ A  ++G+M  
Sbjct: 243 TVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 302

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
            +  P+TVTY+ L+      +     + L  EM      PN+ TYRIL+   C   +   
Sbjct: 303 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 362

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A   ++  IE   L P   V  + +  + RAG+L+   +L   +  +G 
Sbjct: 363 AMALLKA-IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGL 410



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 169/362 (46%), Gaps = 9/362 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K RQ   A++    M ++ +   + T++ L+                N M 
Sbjct: 171 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 230

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNI 268
           +    PD ++F+ V+  LC++ + +EA    D +  +    P+VI Y  L+ G+C+   I
Sbjct: 231 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRI 290

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A  +F EM    + P+  TYS +I  LC   ++  A  +F EM+     PN +T+  L
Sbjct: 291 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRIL 350

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K     + + +   ++    + D    N  ID  C+ G+LE A  + +++  KG 
Sbjct: 351 LDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGL 410

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T++++   + + G ++ A +++ +M +  C  N   YN + + F  +  T   ++
Sbjct: 411 QPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQ 470

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE--MVLQ 506
           L +EM       + +T  + + M    G   +  + +R+  ++K     S +YE  MVLQ
Sbjct: 471 LLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQK-----SWIYENVMVLQ 525

Query: 507 QL 508
           ++
Sbjct: 526 EI 527


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 4/380 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  +IN   K  + DLA + ++ M+   +E  V  +S ++    +     +A++ 
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  M+  G  PD   +S +IS LC   R S+A     D L+ K  P+V+ + +L+  + +
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE++F EM    I PN+ TY+ +I+  C   ++  A  +F  M+   C P+ +T
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    KA +    ++++  M R G   +T+TY  LI    +    ++A  V   MV
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G +PN  T+N +   + K G +  A  ++  ++  K EP+  TYNI+ +    +   +
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+P+V  Y  +I+ +C  G    AY    +M E+  L P S  Y  +
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTL 561

Query: 505 LQQLRRAGQLQKHEELVEKM 524
           ++   R G      EL+++M
Sbjct: 562 IRAHLRDGDKAASAELIKEM 581



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 178/355 (50%), Gaps = 2/355 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M     +    TF+ LV    +   A+EAV    RM   GC PD + +  VI+
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A +  + + K K E DV++Y+ ++   C+  ++ +A  +F EM   GI+P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V+TYS +I  LC  G+ + A  + ++MLE    PN +TFN+L+    K  +  +  +++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M +   + + +TYN LI+  C   +L++A ++   MV K C P+  T+N +     K 
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             V     ++  M       NTVTY  L+  F  +   D    + K+M  + V PN+ TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
             L+   C  G    A   + E +++  ++P    Y ++ + + +AG+++   +L
Sbjct: 454 NTLLDGLCKNGKLEKAM-VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 173/363 (47%), Gaps = 3/363 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F +++KSR     V+ FS L+    +       +    +ME  G + +   ++I+I+ LC
Sbjct: 53  FGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R+ + S A +    + K  + P ++   +L+ G+C    ISEA  +  +M   G QP+  
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T++ ++  L +  + + A  +   M+  GC+P+ +T+  ++    K    +  L + N+M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           ++   EAD + Y+ +ID  CK   ++DA+ +   M  KG  P+  T++ +  C+   G  
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A R+   M + K  PN VT+N L+  FA         KL  EM +  ++PN+ TY  L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I  +C     + A +    M+ + CL P    Y  ++    +A ++    EL   M  RG
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410

Query: 529 FTA 531
              
Sbjct: 411 LVG 413


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 172/352 (48%), Gaps = 3/352 (0%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K  + ++A   ++ M S  +   V  ++ L++    A    EA  
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEG 343

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
               M +  C  D + F+I++  LC+           +  L+    PDVI YT ++ G+C
Sbjct: 344 LLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFC 403

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + R M   G +PN  +Y+IV+  LC   +   A ++ ++M++ GC PN +
Sbjct: 404 KEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPV 463

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K G  ++A+++LN M
Sbjct: 464 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVM 523

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V+KG +PN   ++ I   +S  G +N   +M+  ++D     + V YN ++        T
Sbjct: 524 VKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGET 583

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           D  ++    M  +   PN +TY ILI      G    A + + E+  +  L+
Sbjct: 584 DRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALR 635



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 180/393 (45%), Gaps = 3/393 (0%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           AR     +P +YH  +  A +   F  A   +  +  R   + V   +++++     G  
Sbjct: 138 ARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPV 197

Query: 200 AEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTN 257
            EAV    + +  +GC PD ++++ V+  LC  RR    Q   + +      P+++ ++ 
Sbjct: 198 DEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFST 257

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+   CR G       V  +M   G  P+V  Y+ +ID +C+  ++  A  +   M   G
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN + +N L++    A R E+   +  +M    C  D +T+N L+D  C++G ++  I
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVI 377

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           +VL  M+  GC P+  T+  +     K G ++ A  +   M    C PNTV+Y I+++  
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGL 437

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
            +++      +L  +M +    PN  T+  LI   C  G    A + +++M+   C  P 
Sbjct: 438 CSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPD 496

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              Y  V+  L +AG   +  EL+  MV +G +
Sbjct: 497 LISYSTVIDGLGKAGNTDEALELLNVMVKKGMS 529



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 166/386 (43%), Gaps = 41/386 (10%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           ++ +V  Y RAG   +   A         AP+   +  ++  LC + R ++A +  D + 
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            +   P   +Y   +   CRA     A  V R++   G   +V   ++V+ A+C  G + 
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 305 RA------------------------------------HDVFAEMLEVGCEPNSITFNNL 328
            A                                     D+  EM+  GC PN +TF+ L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +    E+V +V+ QM   GC  D   Y  +ID  CK+ +LE A  +LN M   G 
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +PN   +N + + +        A  +  +M D  C  + VT+NIL+     +   D V++
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + ++M E+   P+V TY  +I  +C  G  + A   +R M    C +P +  Y +VL+ L
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC-RPNTVSYTIVLKGL 437

Query: 509 RRAGQLQKHEELVEKMVDRGFTARPL 534
             A +    EEL+ +M+ +G    P+
Sbjct: 438 CSAERWVDAEELMSQMIQQGCPPNPV 463


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 177/353 (50%), Gaps = 16/353 (4%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRM----EEYGC--APDKIAFSIVISILCRKRRASEAQ 238
           T+  L++   R G  + A+     M      YG    P  I++SI+I  LC+ RR  EA+
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEAR 262

Query: 239 SFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             F+ +K     P VI YT+L+  W       EA+R+F EM   G+QPNV T++++ID L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLM--W------EEAKRLFNEMVNQGVQPNVVTFNVLIDVL 314

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C+ G++  A D+   M++ G  PN +T+N+L+             +++  M   GCE D 
Sbjct: 315 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDV 374

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           I Y  LI+ +CK  K+E+A+K+ N M++ G  P+  T+  +   + + G V  A +++G 
Sbjct: 375 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 434

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           MK      +   Y I +     +      ++L  +++   ++ ++  +  LI   C  G 
Sbjct: 435 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 494

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              A++   ++ +E+ L+P    Y +++ +  R GQ+ K   L +KM   G T
Sbjct: 495 LETAWELFEKLPQEE-LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCT 546



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 217/470 (46%), Gaps = 22/470 (4%)

Query: 65  SLIKDHHRKNPNPSSNSNPSLNPDFT--IPSLSLGFSQISTAHSISPSTVRHVIEKSCGV 122
           S++K +   +    S + PS NP F+  +   SL  S  +    IS      +   +C  
Sbjct: 13  SIVKPNLSSSLFTHSPTIPSSNPHFSSAVHHKSLNVSPQNFNTPISFQQQLSMFLHNCKT 72

Query: 123 RHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT 182
            + I  +Q   FF+ +             H +  LA K++ +   ++  + M+   +   
Sbjct: 73  GN-ITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLA-KIKHYSQVFYLYNQMRLSGISPD 130

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
             T +IL+          E +     +   G  PD + ++ +I  LC + R S+A   F 
Sbjct: 131 CCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFT 190

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM----KMAGI--QPNVYTYSIVID 295
            + K    P+ I Y  L++G CR GNIS A ++ +EM     + GI  +P V +YSI+ID
Sbjct: 191 RMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           ALC+  +   A D+F EM   G  P  I++ +LM         E+  +++N+M   G + 
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQP 302

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           + +T+N LID  CK+GK+ +A  +L  M+++G  PN  T+N +      +GD+N A  ++
Sbjct: 303 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 362

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             M    CEP+ + Y +L+  +  +   +  +KL   M +    P+V TY  L+T     
Sbjct: 363 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 422

Query: 476 GHWNNAYKYIREMIEEKCLKPGS-SVYEMVLQQLRRAGQLQKHEELVEKM 524
           G   +A K    M       PG   +Y + L  L + G L +  EL  K+
Sbjct: 423 GKVGDAKKLFGVMKVYGI--PGDLYIYGIFLNGLCKNGCLFEAMELFNKL 470



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 157/320 (49%), Gaps = 9/320 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K R+ D A    + MK + +  TV +++ L        +  EA   FN M 
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL--------MWEEAKRLFNEMV 296

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + F+++I +LC++ +  EA+   + +  +   P+++ Y +L+ G+C  G+++
Sbjct: 297 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 356

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  M   G +P+V  Y+++I+  C+  ++  A  ++  ML+VG  P+  T+  L+
Sbjct: 357 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 416

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  +     +++  MK  G   D   Y   ++  CK+G L +A+++ N +      
Sbjct: 417 TGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK 476

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   FN +   + K G +  A  ++ K+   + +P+ VTYNI++  F           L
Sbjct: 477 LDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANIL 536

Query: 450 KKEMEENEVEPNVNTYRILI 469
            ++ME+N   P+  TY  LI
Sbjct: 537 FQKMEKNGCTPDKITYATLI 556



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 122/243 (50%), Gaps = 4/243 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV +   A   +++M  R +   + T++ L+  +   G    A   F  M   GC PD 
Sbjct: 318 GKVIE---AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDV 374

Query: 219 IAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           I ++++I+  C+  +  EA   ++  L+    PDV  Y  L+ G  + G + +A+++F  
Sbjct: 375 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 434

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           MK+ GI  ++Y Y I ++ LC+ G +  A ++F ++     + +   FN L+    KA +
Sbjct: 435 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 494

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E   +++ ++ +   + D +TYN +I   C+ G++  A  +   M + GC P+  T+  
Sbjct: 495 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 554

Query: 398 IFR 400
           + R
Sbjct: 555 LIR 557



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 124/242 (51%), Gaps = 3/242 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+L  Y+ +I     V   + A      M S+  E  V  +++L+  Y +     EA+  
Sbjct: 337 PNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKL 396

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCR 264
           +N M + G  PD   +  +++ L +  +  +A+  F  +K    P D+ +Y   + G C+
Sbjct: 397 YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCK 456

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA  +F ++K   I+ ++  ++ +ID LC+ G++  A ++F ++ +   +P+ +T
Sbjct: 457 NGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVT 516

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    +  +  K   ++ +M++ GC  D ITY  LI    +  KLE  +++L+ MV
Sbjct: 517 YNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMV 576

Query: 385 RK 386
           ++
Sbjct: 577 QR 578



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 15/285 (5%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +T+L+ G  +  + S+   ++ +M+++GI P+  T +I+++ LC   ++     V
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A +L  G  P+ +T+  L++      R  K   ++ +M++LGC  + ITY  L+   C+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 370 DGKLEDAIKV----LNSMVRKGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
            G +  A+K+    LN     G N  P   ++++I   + K    + A  ++ +MK    
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P  ++Y  LM   A         +L  EM    V+PNV T+ +LI + C  G    A  
Sbjct: 274 TPTVISYTSLMWEEAK--------RLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 325

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +  MI ++ + P    Y  +++     G L    EL   M  +G
Sbjct: 326 LLEVMI-QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 132/280 (47%), Gaps = 17/280 (6%)

Query: 263 CRAGNIS--EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           C+ GNI+  +A + F  M  +   P + +++ ++  L +    ++   ++ +M   G  P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +  T N L+      +R  + L V   + R G   D +TY  LI   C + ++  A  + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD------LKCEPNTVTYNILM 434
             M + GC PNA T+  + + + + G+++ A +++ +M +      +  +P  ++Y+I++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                 +  D    L +EM+   + P V +Y  L+        W  A +   EM+ +  +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQG-V 300

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           +P    + +++  L + G++ + ++L+E M+ RG     L
Sbjct: 301 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL 340


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 181/357 (50%), Gaps = 3/357 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M    V   V T++ILVR     G   EAV     M   GCAP+ + ++ +++  CR   
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 234 ASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
              A+     ++++   +P+++ + ++V G C+AG +  A +VF EM   G+ P+V +Y+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            ++   C+ G +  +  VF+EM + G  P+ +TF +L+    KA   E+ + +  QM+  
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G   + +T+  LID  CK G L+DA+  +  M + G  P+   +N +     KLG ++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  +M+  + +P+ VTY+ ++  +    + D   +L ++M +  V P+  TY  LI  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C     N+A +    M++   ++P    Y  ++    + G ++K   L ++M+ +G
Sbjct: 301 LCEEKRLNDACELFENMLQLG-VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 176/342 (51%), Gaps = 3/342 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCA-PDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ LV  + RAG    A    + M E G A P+ + F+ +++ LC+  R   A+  FD 
Sbjct: 47  TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 106

Query: 244 L-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + ++   PDV+ Y  L+ G+C+ G + E+  VF EM   G+ P+V T++ +I A C+ G 
Sbjct: 107 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 166

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + +A  + A+M E G   N +TF  L+    K    +  L    +M++ G +   + YN 
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI+ +CK G+++ A +++  M  K   P+  T++ I     K+G+++ A ++  KM    
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TY+ L++     K  +   +L + M +  V+P+  TY  LI  +C  G+   A 
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               EMI +  L P    Y +++  L ++ + ++   L+ K+
Sbjct: 347 SLHDEMIRKGVL-PDVVTYSVLINGLSKSARTKEAHRLLFKL 387



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 187/387 (48%), Gaps = 24/387 (6%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +++   KV     +      M  R +   V TF+ L+    +AG   +AV 
Sbjct: 113 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 172

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
              +M E G   +++ F+ +I   C+K    +A    + + K   +P V+ Y  L+ G+C
Sbjct: 173 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 232

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G +  A  + REM+   ++P+V TYS +I   C+ G +  A  +  +ML+ G  P++I
Sbjct: 233 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 292

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+++L+R   +  R     +++  M +LG + D  TY  LID HCK+G +E A+ + + M
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +RKG  P+  T++++   +SK      AHR+  K+      P+ + Y+ LM   + ++  
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 412

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
            +V  LK                     +C  G    A K  + M++    K   SVY +
Sbjct: 413 SVVALLKG--------------------FCMKGLMKEADKVYQSMLDRN-WKLDGSVYSI 451

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++    R G ++K     ++M+  GF+
Sbjct: 452 LIHGHCRGGNVRKALSFHKQMLRSGFS 478



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 38/341 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+ + DLA   I  M+++ V+  V T+S ++  Y + G    A     +M 
Sbjct: 224 YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 283

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD I +S +I  LC ++R ++A   F++ L+   +PD   YT L+ G C+ GN+ 
Sbjct: 284 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 343

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +  EM   G+ P+V TYS++I+ L +  +   AH +  ++      P++I ++ LM
Sbjct: 344 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403

Query: 330 RVHVKASRTEKVL---------------QVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
               KA     V                +VY  M     + D   Y+ LI  HC+ G + 
Sbjct: 404 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 463

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A+     M+R G +PN+++   + R + + G V  A      +  L C P         
Sbjct: 464 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL--LTCCP--------- 512

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
              A ++++  ++ L      N  E NV+    LI + CGM
Sbjct: 513 --LADAEASKALIDL------NRKEGNVDA---LIDVLCGM 542



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 16/259 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    + ++ + A    + M    V+    T++ L+  + + G   +A+   + M 
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF------DSLKDKFEPDVIVY--------- 255
             G  PD + +S++I+ L +  R  EA          D + D  + D ++          
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 413

Query: 256 -TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
              L++G+C  G + EA++V++ M     + +   YSI+I   CR G + +A     +ML
Sbjct: 414 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 473

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  PNS +  +L+R   +     +       +      AD      LID + K+G ++
Sbjct: 474 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVD 533

Query: 375 DAIKVLNSMVRKGCNPNAS 393
             I VL  M R G  P++ 
Sbjct: 534 ALIDVLCGMARDGLLPSSG 552


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 170/340 (50%), Gaps = 2/340 (0%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           ++  V+ G    A+     M+  G +P    +++VI  LC+++R  +A+  FD + D+  
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRV 248

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P+ I Y  L+ G+C+ G + EA  +   MK+  ++P + T++ +++ LCR   +  A  
Sbjct: 249 APNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQR 308

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  EM   G  P+  T+  L   H+K    +  + +  +  R G +    T + L++  C
Sbjct: 309 VLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALC 368

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G +E A +VL   +  G  P    FN I     ++GD+N A+    KM+ +   PN V
Sbjct: 369 KEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHV 428

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TYN L++ F   K+ +   K  K+M E  V PNV TY  LI  Y     ++  ++ + EM
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            E+K LKP    Y  ++  L +   + + E ++  MV RG
Sbjct: 489 -EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRG 527



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 188/410 (45%), Gaps = 42/410 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   KV Q + A++  + MK  NVE T+ TF+ L+    RA +  EA      ME
Sbjct: 255 YNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314

Query: 211 EYGCAPDKIAF-----------------------------------SIVISILCRKRRAS 235
            YG  PD+  +                                   SI+++ LC++    
Sbjct: 315 VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374

Query: 236 EAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           +A+      L++   P  + +  +V G+C+ G+I++A     +M+  G++PN  TY+ ++
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
              C    +  A     +M+E G  PN  T+N L+  + ++   ++  Q+  +M++ G +
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            + I+Y  LI+C CKD  + +A  +L  MV +G  PNA  +NM+       G +  A R 
Sbjct: 495 PNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRF 554

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M   +  P  VTYNIL+              L  E+    +  +V TY  LI+ Y  
Sbjct: 555 FDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSS 614

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            G+   A + + E +++  +KP  + Y  ++    + G +     LVEK+
Sbjct: 615 AGNVQKALE-LYETMKKSGIKPTLNTYHRLIAGCGKEGLV-----LVEKI 658



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 187/392 (47%), Gaps = 7/392 (1%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           V  RP  V     Y+ ++    +++  + A   I  M  + V   V+T++ L+  Y R+ 
Sbjct: 421 VGLRPNHVT----YNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSC 476

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYT 256
           L          ME+ G  P+ I++  +I+ LC+     EA+    D +     P+  +Y 
Sbjct: 477 LFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYN 536

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L+ G C AG + +A R F EM    I P + TY+I+I+ LC+ G++  A ++ +E+   
Sbjct: 537 MLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRK 596

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G   + IT+N+L+  +  A   +K L++Y  MK+ G +    TY+ LI    K+G L   
Sbjct: 597 GLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLV 655

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            K+   M++    P+   +N +  C  + GDV  A  ++  M+    +P+ +TYN L+  
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILG 715

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                    V  L  +M+   + P   TY ILI  +C +  ++ AY + REM E     P
Sbjct: 716 HFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENG-FTP 774

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             S+ + ++  LR  G+    + +  +M  +G
Sbjct: 775 SVSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 177/382 (46%), Gaps = 2/382 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I    K ++   A    D M  R V     T++ L+  Y + G   EA +   RM
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM 278

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
           +     P  I F+ +++ LCR +   EAQ   + ++   F PD   YT L  G  + GN+
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNV 338

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             +  +  E    G+Q   YT SI+++ALC+ G + +A +V  + LE G  P  + FN +
Sbjct: 339 DASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTI 398

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  + +     K      +M+ +G   + +TYN L+   C+   +E+A K +  MV KG 
Sbjct: 399 VNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGV 458

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN  T+N +     +    +   ++  +M+    +PN ++Y  L+       +      
Sbjct: 459 LPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEV 518

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +  +M    V PN   Y +LI   C  G   +A+++  EM+  + + P    Y +++  L
Sbjct: 519 ILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV-PTLVTYNILINGL 577

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            + G++ + E L  ++  +G +
Sbjct: 578 CKKGKVMEAENLASEITRKGLS 599



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 161/332 (48%), Gaps = 2/332 (0%)

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVI-SILCRKRRASEAQSFFDSLKDKFEPDVIVYT 256
           + +E+   +  M++ G  P   + ++ + S++  KR     Q F + ++    PD  +Y 
Sbjct: 127 MVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYG 186

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
             ++   + G++  A  +   MK  G+ P V+ Y++VI  LC+  ++  A  +F EML+ 
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR 246

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
              PN IT+N L+  + K  + E+   +  +MK    E   IT+N L++  C+   +E+A
Sbjct: 247 RVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEA 306

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            +VL  M   G  P+  T+  +F    K G+V+ +  +  +      +    T +IL+  
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNA 366

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                + +   ++ K+  EN + P    +  ++  YC +G  N AY  I +M E   L+P
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKM-EAVGLRP 425

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               Y  ++++      +++ E+ ++KMV++G
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 184/378 (48%), Gaps = 2/378 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+N   K  + +    F+  ++ + V   + T++ L+  Y   GL  EA    + M   G
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
            +P    ++ VI+ LC+  +   A+  F + L+    PD   Y +L+   C+ G+  E E
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE 350

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F +M+   + P++  +S ++    R G + +A   F  + E G  P+++ +  L++ +
Sbjct: 351 NIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 410

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +     + + + N+M + GC  D +TYN ++   CK   L +A K+ N M  +G  P++
Sbjct: 411 CRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDS 470

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T  ++     KLG++  A  ++ KMK+ + + + VTYN L+  F      D   ++  +
Sbjct: 471 YTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWAD 530

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M   E+ P   ++ IL+   C  GH + A++   EMI  K +KP   +   +++   R+G
Sbjct: 531 MVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMI-SKSIKPTVMICNSMIKGYCRSG 589

Query: 513 QLQKHEELVEKMVDRGFT 530
                E  +EKM+  GF 
Sbjct: 590 NASDGEIFLEKMISEGFV 607



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 197/399 (49%), Gaps = 6/399 (1%)

Query: 135 FNWVTARPEFVHSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F  + A P    SP +Y  + +IN   K  +++ A      M    +     T+  L+  
Sbjct: 280 FELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 339

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
             + G A E  + F+ M      PD + FS ++S+  R     +A  +F+S+K+    PD
Sbjct: 340 ACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 399

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
            ++YT L++G+CR G ISEA  +  EM   G   +V TY+ ++  LC+   +  A  +F 
Sbjct: 400 NVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 459

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM E G  P+S T   L+  H K    +  ++++ +MK    + D +TYN L+D   K G
Sbjct: 460 EMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVG 519

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            ++ A ++   MV K   P   +F+++   +   G ++ A R++ +M     +P  +  N
Sbjct: 520 DIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICN 579

Query: 432 ILMQMFATS-KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
            +++ +  S  ++D  + L+K + E  V P+  +Y  LI  +    + + A+  +++M E
Sbjct: 580 SMIKGYCRSGNASDGEIFLEKMISEGFV-PDCISYNTLIYGFVKEENMSKAFGLVKKMEE 638

Query: 491 EK-CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L P    Y  +L    R  Q+++ E ++ KM++RG
Sbjct: 639 KQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERG 677



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 191/392 (48%), Gaps = 9/392 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+        + A+  +  M S+     V T++ ++    + G    A   
Sbjct: 258 PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M   G +PD   +  ++   C+K  A E ++ F  ++ +   PD++ +++++  + R
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTR 377

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +GN+ +A   F  +K AG+ P+   Y+I+I   CR G I+ A ++  EML+ GC  + +T
Sbjct: 378 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVT 437

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    K     +  +++N+M   G   D+ T   LID HCK G L++A+++   M 
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK 497

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            K    +  T+N +     K+GD++ A  ++  M   +  P  ++++IL+    +     
Sbjct: 498 EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLS 557

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE----KCLKPGSSV 500
              ++  EM    ++P V     +I  YC  G+ ++   ++ +MI E     C+   + +
Sbjct: 558 EAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLI 617

Query: 501 YEMVLQQ-LRRA-GQLQKHEELVEKMVDRGFT 530
           Y  V ++ + +A G ++K EE    +V   FT
Sbjct: 618 YGFVKEENMSKAFGLVKKMEEKQGGLVPDVFT 649



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 176/360 (48%), Gaps = 4/360 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+SR+V   +  FS ++  + R+G   +A+  FN ++E G  PD + ++I+I   CRK  
Sbjct: 356 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 415

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            SEA +  +  L+     DV+ Y  ++ G C+   + EA+++F EM   G+ P+ YT +I
Sbjct: 416 ISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTI 475

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID  C+ G +  A ++F +M E   + + +T+N L+    K    +   +++  M    
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                I+++ L++  C  G L +A +V + M+ K   P     N + +   + G+ +   
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGE 595

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE--VEPNVNTYRILIT 470
               KM      P+ ++YN L+  F   ++      L K+MEE +  + P+V TY  ++ 
Sbjct: 596 IFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILH 655

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +C       A   +R+MI E+ + P  S Y  ++        L +     ++M+ RGF+
Sbjct: 656 GFCRENQMKEAEAVLRKMI-ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFS 714



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 168/349 (48%), Gaps = 6/349 (1%)

Query: 184 DTFSILVRRYVRAGLA-AEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFF 241
           D  S ++R   R+G++  E V++   +  Y  C  +   F ++I    + R+  EA   F
Sbjct: 121 DAQSCVLRMIRRSGVSRVEIVNSL--VSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAF 178

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             L+ K +   +     L+    R G +  A R+++E+  +G+  NVYT +I+++ALC+ 
Sbjct: 179 TLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKD 238

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G++ +     +E+ E G  P+ +T+N L+  +      E+  ++ + M   G      TY
Sbjct: 239 GKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTY 298

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N +I+  CK GK E A +V   M+R G +P+++T+  +     K GD      ++  M+ 
Sbjct: 299 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRS 358

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
               P+ V ++ +M +F  S + D  L     ++E  + P+   Y ILI  YC  G  + 
Sbjct: 359 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISE 418

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A     EM+++ C       Y  +L  L +   L + ++L  +M +RG 
Sbjct: 419 AMNLRNEMLQQGCAMD-VVTYNTILHGLCKRKMLGEADKLFNEMTERGL 466



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 171/348 (49%), Gaps = 5/348 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  M++L  +    D A  + + +K   +      ++IL++ Y R G+ +EA++ 
Sbjct: 363 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNL 422

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N M + GCA D + ++ ++  LC+++   EA   F+ + ++   PD    T L+ G C+
Sbjct: 423 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCK 482

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GN+  A  +F++MK   I+ +V TY+ ++D   + G I  A +++A+M+     P  I+
Sbjct: 483 LGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 542

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           F+ L+          +  +V+++M     +   +  N +I  +C+ G   D    L  M+
Sbjct: 543 FSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMI 602

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK--CEPNTVTYNILMQMFATSKS 442
            +G  P+  ++N +     K  +++ A  +  KM++ +    P+  TYN ++  F     
Sbjct: 603 SEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQ 662

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
                 + ++M E  V P+ +TY  LI  +    +   A+++  EM++
Sbjct: 663 MKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ 710



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 122 VRHGIPLLQVLS----FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMK 175
           + HG+   ++L      FN +T R  F   PD Y   I + G  +  +L  A      MK
Sbjct: 441 ILHGLCKRKMLGEADKLFNEMTERGLF---PDSYTLTILIDGHCKLGNLQNAMELFKKMK 497

Query: 176 SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
            + +++ V T++ L+  + + G    A   +  M      P  I+FSI+++ LC K   S
Sbjct: 498 EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLS 557

Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA   +D +  K  +P V++  ++++G+CR+GN S+ E    +M   G  P+  +Y+ +I
Sbjct: 558 EAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLI 617

Query: 295 DALCRCGQITRAHDVFAEMLEV--GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
               +   +++A  +  +M E   G  P+  T+N+++    + ++ ++   V  +M   G
Sbjct: 618 YGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERG 677

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
              D  TY  LI+       L +A +  + M+++G +P+
Sbjct: 678 VNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/191 (18%), Positives = 80/191 (41%), Gaps = 18/191 (9%)

Query: 357 TITYNFLIDCHCKDGKLEDA---------------IKVLNSMVR--KGCNPNASTFNMIF 399
           +++ + +I    + G+L DA               ++++NS+V     C  N S F+++ 
Sbjct: 103 SLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLI 162

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
           R   +   +  A+  +  ++      +    N L+         ++  ++ +E+  + V 
Sbjct: 163 RTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVG 222

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            NV T  I++   C  G       ++ E ++EK + P    Y  ++      G +++  E
Sbjct: 223 VNVYTLNIMVNALCKDGKMEKVGTFLSE-VQEKGVYPDIVTYNTLISAYSSQGLMEEAFE 281

Query: 520 LVEKMVDRGFT 530
           L+  M  +GF+
Sbjct: 282 LMHAMPSKGFS 292


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 186/376 (49%), Gaps = 5/376 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN+ GK  +  +A   ++ +     E  V  ++ L+   V  G   EAV  F +MEE G
Sbjct: 4   IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 214 CAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI-SE 270
           C P  I +++++++  +     ++    F+ +K+    PD   Y  L+   CR G++  E
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLIT-CCRRGSLYEE 122

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A  VF +MK  G  P+  TY+ ++D   +  +I  A +V  EM   GC P+ +T+N+L+ 
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            + +    E+ +++ NQM   G + D  TY  ++    + GK E A++V   M   GC P
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N  TFN + +     G      +++ ++K   C P+ VT+N L+ +F  +     V  + 
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           KEM+     P  +TY  LI+ Y   G ++ A    + M++   + P  S Y  VL  L R
Sbjct: 303 KEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTG-ITPDLSTYNAVLAALAR 361

Query: 511 AGQLQKHEELVEKMVD 526
            G  ++ E+++ +M D
Sbjct: 362 GGLWEQSEKILAEMQD 377



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    +   ++ A    + MKS        T++ L+  Y ++    EA+     ME
Sbjct: 107 YNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREME 166

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             GC+P  + ++ +IS   R     EA    + + ++  + DV  YT ++ G+ R G   
Sbjct: 167 VNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDE 226

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A RVF EM+ AG +PN+ T++ +I      G+      VF E+    C P+ +T+N L+
Sbjct: 227 SAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLL 286

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            V  +     +V  V+ +MKR+G   +  TYN LI  + + G  + A+ +   M+  G  
Sbjct: 287 AVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGIT 346

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ ST+N +   +++ G    + ++  +M+D  C+PN +T+  L+  +A  K    +L L
Sbjct: 347 PDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLAL 406

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +E+    +EP+    + L+ +         A +   E+ + K   P  S    ++    
Sbjct: 407 AEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLEL-KRKGFSPDLSTLNAMIAIYG 465

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           R   + K  E++  M + GFT
Sbjct: 466 RRQMVTKTNEILNFMKESGFT 486



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 189/424 (44%), Gaps = 8/424 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR--QFD 165
           SPS V +    S   R G+ L + +   N +  R       D++     L+G VR  + +
Sbjct: 171 SPSIVTYNSLISAYARDGL-LEEAMELKNQMVERG---IKLDVFTYTAMLSGFVRTGKDE 226

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
            A    + M++   +  + TF+ L++ +   G  AE +  F  ++   C PD + ++ ++
Sbjct: 227 SAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLL 286

Query: 226 SILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           ++  +    SE    F  +K   F P+   Y  L+  + R G+  +A  +++ M   GI 
Sbjct: 287 AVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGIT 346

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P++ TY+ V+ AL R G   ++  + AEM +  C+PN +T  +L+  +       ++L +
Sbjct: 347 PDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLAL 406

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             ++     E   +    L+  + K   L +A +    + RKG +P+ ST N +     +
Sbjct: 407 AEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGR 466

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
              V   + +   MK+    P+  TYN LM M + S++ +   ++ KE+    ++P++ +
Sbjct: 467 RQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIIS 526

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  +I  YC  G    A     EM  E  L P    Y   +         ++  ++V  M
Sbjct: 527 YNTVIFAYCRNGRMKEASHIFSEM-RESGLIPDVITYNTFVASYAADSMFEEAIDVVCYM 585

Query: 525 VDRG 528
           +  G
Sbjct: 586 IKHG 589



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 141/308 (45%), Gaps = 1/308 (0%)

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           DT++ L+  Y R G   +A+  + RM + G  PD   ++ V++ L R     +++     
Sbjct: 315 DTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAE 374

Query: 244 LKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           ++D   +P+ + + +L+  +     I     +  E+    I+P+      ++    +C  
Sbjct: 375 MQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDL 434

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A   F E+   G  P+  T N ++ ++ +     K  ++ N MK  G      TYN 
Sbjct: 435 LLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNS 494

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  H +    E + +VL  ++ KG  P+  ++N +     + G +  A  ++ +M++  
Sbjct: 495 LMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESG 554

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN  +  +A     +  + +   M ++  +PN NTY  +I  YC +   ++A 
Sbjct: 555 LIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAI 614

Query: 483 KYIREMIE 490
           K+I  + E
Sbjct: 615 KFISSLHE 622



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 134/317 (42%), Gaps = 36/317 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV   D Y+ +I+   +   FD A      M    +   + T++ ++    R GL  
Sbjct: 307 RVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWE 366

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
           ++      M++  C P+++    ++      +      +  + +     EP  ++   LV
Sbjct: 367 QSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
               +   + EAER F E+K  G  P++ T + +I    R   +T+ +++   M E G  
Sbjct: 427 LVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFT 486

Query: 320 PNSITFNNLMRVHVKAS---RTEKVLQ--------------------------------V 344
           P+  T+N+LM +H ++    R+E+VL+                                +
Sbjct: 487 PSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHI 546

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +++M+  G   D ITYN  +  +  D   E+AI V+  M++ GC PN +T+N +     K
Sbjct: 547 FSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCK 606

Query: 405 LGDVNGAHRMYGKMKDL 421
           L   + A +    + +L
Sbjct: 607 LNRRDDAIKFISSLHEL 623



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +++I+ L + G+++ A  +   + + G EP+   + +L+   V   R  + + V+ +M+ 
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVL-NSMVRKGCNPNASTFNMIFRCISKLGDVN 409
            GC+   ITYN +++ + K G   + I  L   M   G  P+  T+N +  C  +     
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++  MK +   P+ VTYN L+ ++  S+     +++ +EME N   P++ TY  LI
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + Y   G    A +   +M+ E+ +K     Y  +L    R G+ +    + E+M   G
Sbjct: 182 SAYARDGLLEEAMELKNQMV-ERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 56/133 (42%)

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           +I   + K G V+ A  +   +     EP+   Y  L+    ++      + + K+MEE 
Sbjct: 3   VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
             +P + TY +++ +Y  MG   N    + E ++   + P    Y  ++   RR    ++
Sbjct: 63  GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122

Query: 517 HEELVEKMVDRGF 529
              + E M   GF
Sbjct: 123 AAAVFEDMKSMGF 135


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 187/414 (45%), Gaps = 37/414 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K  +F+ A   I  M    ++++  T++ L+  Y   G+ AEA+     M 
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P    ++  I  LC+  R S+A Q   D L +   PDV+ Y  L+ G+CR GN+ 
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391

Query: 270 EAERVFREMKM-----------------------------------AGIQPNVYTYSIVI 294
           +A  +F E++                                     GI P++ TY+I++
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +  C+ G ++ A + F EML  G E +S  +   +   +K   T +   +  +M   G  
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP 511

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D I YN ++D  CK G LE+A ++L  MV  G  P+  T+  I     + G +     +
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M      P+ VTY +L+   A     +       EM+E  + PNV TY  LI   C 
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   + AY +  EM+ EK + P    Y +++ +    G  Q+   L ++M+DRG
Sbjct: 632 VRRMDQAYNFFAEMV-EKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/413 (22%), Positives = 194/413 (46%), Gaps = 16/413 (3%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNV------------ 179
           L  F W  ++P F  S  ++  ++ +  +      A+  ++ + + N+            
Sbjct: 99  LRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCV 158

Query: 180 --EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
             E++V    +L+  Y +  +  + +  F++M +   +PD    + ++ IL  K   S+A
Sbjct: 159 SSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKA 218

Query: 238 QSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
              + ++ +   +P ++ Y  L+  +C+ G + +   +  EM+  G  PN  TY+++I+ 
Sbjct: 219 VEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING 278

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           L + G+  +A  +  EML+ G + ++ T+N L+  +       + L +  +M   G    
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPT 338

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TYN  I   CK G++ DA++ L+ M+     P+  ++N +     +LG++  A  ++ 
Sbjct: 339 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +++ +   P  VTYN L+         ++  +LK EM    + P++ TY IL+   C MG
Sbjct: 399 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             + A ++  EM+ E  L+  S  Y   +    + G   +   L E+M+ +GF
Sbjct: 459 SLSMAQEFFDEMLHEG-LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 174/358 (48%), Gaps = 2/358 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M    ++ T+ T++ L+  Y + G   + +   + M+  GCAP+ + ++++I+ L +K  
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 234 ASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+    + LK   +     Y  L+ G+   G ++EA  +  EM + G  P V TY+ 
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
            I  LC+ G+++ A    ++ML     P+ +++N L+  + +     K   ++++++ + 
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                +TYN L+D  C+ G+LE A ++   M+ +G  P+  T+ ++     K+G ++ A 
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
             + +M     E ++  Y   +        T     L++EM      P++  Y +++   
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           C +G+   A + +++M+ +  + P    Y  ++      G+L+K  E+  +M+ +G T
Sbjct: 525 CKLGNLEEASELLQKMVSDGVI-PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLT 581



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 172/386 (44%), Gaps = 5/386 (1%)

Query: 85  LNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEF 144
            N      +LSL    +    S + +T    I   C +      +Q LS        P+ 
Sbjct: 315 FNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDV 374

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V    L +    L   ++ F L     D ++S  +  T+ T++ L+    R G    A  
Sbjct: 375 VSYNTLIYGYCRLGNLMKAFLL----FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
               M   G APD + ++I+++  C+    S AQ FFD  L +  E D   Y   + G  
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G+ S A  +  EM   G  P++  Y++V+D LC+ G +  A ++  +M+  G  P+ +
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+ +++  H++  R  K  +++ +M   G     +TY  LI  H   G+LE A    + M
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  PN  T+N +   + K+  ++ A+  + +M +    PN  +Y IL+       + 
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILI 469
              L L K+M +  V+P+  T+  L+
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALL 696



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 6/281 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  ++N + K+    +A  F D M    +E+    ++  +   ++ G  + A  
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               M   G  PD I +++V+  LC+     EA      +  D   PD + YT+++    
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHL 560

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G + +   +F EM   G+ P+V TY+++I      G++ RA   F+EM E G  PN I
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N+L+    K  R ++    + +M   G   +  +Y  LI+ +C  G  ++A+ +   M
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680

Query: 384 VRKGCNPNASTFNMIFRCIS---KLGDVNGAHRMYGKMKDL 421
           + +G  P++ T + + + +    KL  V+G   M     DL
Sbjct: 681 LDRGVQPDSCTHSALLKQLGKDCKLQAVHGTSTMPTAKVDL 721


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 171/320 (53%), Gaps = 2/320 (0%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           M E   +PD  ++ I+I  L +  + ++A+  F  L      P  + YT+L+ G C A +
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
             +A  +F +M   G  P+  TY+++IDA C+ G +  A D+  +M+E G  P+ +T+N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +M    K+ R E+ L ++N+M+RLGC  +  ++N +I   C+  K++ A +V + M  + 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P++ ++ ++   ++K G +N A++++ +M D    P+ VTYN+++     + + D  L
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L K M      P+  T+ ILI  +C  G  + A++ ++ M ++  + P    Y  ++  
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV-PDVVTYSTLISG 299

Query: 508 LRRAGQLQKHEELVEKMVDR 527
           L    ++     L+E MV R
Sbjct: 300 LCSIARVDDARHLLEDMVKR 319



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 172/373 (46%), Gaps = 2/373 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A      M++R++     ++ IL+    +AG   EA   F RM + G  P  + ++
Sbjct: 165 KIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN 224

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           +VI  +C      EA   F S++ K   P    +  L+   C+ G + EA R+ + M   
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDD 284

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G  P+V TYS +I  LC   ++  A  +  +M++  C+P  +T N L+    KA R ++ 
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            +V + M   G   D +TYN L+  HC+ G+ E A ++L+ MV +G  PN  T+  +   
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K   +  A  ++ +MK   C PN  TY  L+  F ++   D  LKL  EM    + P+
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEE-KCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
              Y  L    C  G    A + +RE  E  +    G  VY   +  L  AG+++     
Sbjct: 465 HVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGF 524

Query: 521 VEKMVDRGFTARP 533
           V  MV  G    P
Sbjct: 525 VRDMVRGGQLPAP 537



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 179/356 (50%), Gaps = 2/356 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  RNV     ++ IL+    +AG   +A   F ++   G  P  +A++ +I  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 234 ASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+  F D  +    P  + Y  ++   C+ G + EA  + ++M   G  P+V TY+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           V+D LC+ G++  A  +F EM  +GC PN  + N ++    + S+ ++  QV+++M+   
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D+ +Y  LID   K GKL +A K+   M+  G  P+A T+N++   +     ++ A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  M+   C P+  T+NIL+         D   +L K M ++   P+V TY  LI+  
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C +   ++A   + +M++ +C KP       ++  L +AG++++  E+++ MV  G
Sbjct: 301 CSIARVDDARHLLEDMVKRQC-KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 180/385 (46%), Gaps = 2/385 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP  Y+ +I+ + K    + A   I  M        V T++ ++    ++G   EA+  F
Sbjct: 79  SPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLF 138

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           N ME  GC P++ + + +I  LC++ +  +A   F  ++ +   PD   Y  L+ G  +A
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKA 198

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G ++EA ++FR M  +GI P+  TY++VI  +C    +  A ++F  M   GC P+  TF
Sbjct: 199 GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+  H K  + ++  ++  +M   G   D +TY+ LI   C   +++DA  +L  MV+
Sbjct: 259 NILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 318

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           + C P   T N +   + K G +  A  +   M      P+ VTYN L+     +  T+ 
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 378

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             +L  +M    + PNV TY  L++  C       A     +M    C  P    Y  ++
Sbjct: 379 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC-APNLFTYTALI 437

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFT 530
                AGQ+    +L  +MV  G +
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGIS 462



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 181/379 (47%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+       FD A      M  R    +  T+++++    + G+  EA     +M 
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD + ++ V+  LC+  R  EA   F+ ++     P+   +  ++ G C+   I 
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A +VF EM+   I P+ ++Y I+ID L + G++  A+ +F  ML+ G  P+++T+N ++
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                A   ++ L+++  M+  GC     T+N LID HCK GK+++A ++L  M   G  
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++ +   +  +  V+ A  +   M   +C+P  VT N L+     +       ++
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M  +   P+V TY  L+  +C  G    A + + +M+  + L P    Y  ++  L 
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV-ARGLAPNVVTYTALVSGLC 406

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +A +L +   +  +M   G
Sbjct: 407 KANRLPEACGVFAQMKSSG 425



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 15/327 (4%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD+  Y  +I+    + + D A H ++ M  R  + TV T + L+    +AG   EA 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
              + M   G +PD + ++ ++   CR  +   A+    D +     P+V+ YT LV G 
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+A  + EA  VF +MK +G  PN++TY+ +I   C  GQ+     +F EM+  G  P+ 
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKR-LGCEA--DTITYNFLIDCHCKDGKLEDAIKV 379
           + +  L     K+ R+ + L++  + +  L  EA  D + Y F +D     GK+E A+  
Sbjct: 466 VVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDGLLDAGKMEMALGF 524

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           +  MVR G  P       +   + K G    A  +  ++ DL        Y    +  A 
Sbjct: 525 VRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL-------AYGGKARGKAA 577

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYR 466
               +MV K   E+E+  ++P ++T +
Sbjct: 578 KFVEEMVGK-GYEIEDGVLKPLLSTLK 603


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 192/376 (51%), Gaps = 2/376 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++N   +  Q  LA  F+  M     E ++ TF  L+  + R     +A++ F++M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P+ + ++ +I  LC+ ++   A    + + KD   PDV+ Y +L+ G C +G  S+A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R+   M    I P+V+T++ +IDA  + G+++ A + + EM+    +P+ +T++ L+   
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
              SR ++  +++  M   GC  D +TY+ LI+ +CK  K+E  +K+   M ++G   N 
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+ ++ +   + G +N A  ++ +M      PN +TYN+L+     +   +  L +  +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M++N ++ ++ TY I+I   C  G   +A+  I   +  + L P    Y  ++  L + G
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWD-IYCSLNCQGLMPDIWTYTTMMLGLYKKG 480

Query: 513 QLQKHEELVEKMVDRG 528
             ++ + L  KM + G
Sbjct: 481 LRREADALFRKMKEDG 496



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 191/394 (48%), Gaps = 5/394 (1%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           +R  + +  D Y EM+    +  + D +   F  +++ R +    D FS L+    +   
Sbjct: 39  SRRAYSNGSD-YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIAD-FSRLLSAISKMKK 96

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTN 257
               ++ + +M+  G   +    +I+++  CR  + S A SF   + K   EP ++ + +
Sbjct: 97  YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGS 156

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+ G+CR   + +A  +F +M   G +PNV  Y+ +ID LC+  Q+  A D+   M + G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P+ +T+N+L+     + R     ++ + M +     D  T+N LID   K+G++ +A 
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           +    M+R+  +P+  T++++   +     ++ A  M+G M    C P+ VTY+IL+  +
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             SK  +  +KL  EM +  V  N  TY ILI  YC  G  N A +  R M+    + P 
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG-VHPN 395

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
              Y ++L  L   G+++K   ++  M   G  A
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 183/395 (46%), Gaps = 15/395 (3%)

Query: 75  PNPSSNSNPSLNPDFTIPSLSLGFS----QISTAHSISPSTVRHVIEKSCGVRHGIPLLQ 130
           P+     N  LN       LSL  S     I   H  S  T   ++   C    G  +  
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC---RGDRVYD 169

Query: 131 VLSFFNWVTA---RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
            L  F+ +     +P  V    +Y+ +I+   K +Q D A   ++ M+   +   V T++
Sbjct: 170 ALYMFDQMVGMGYKPNVV----IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KD 246
            L+     +G  ++A    + M +    PD   F+ +I    ++ R SEA+ F++ + + 
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             +PD++ Y+ L+ G C    + EAE +F  M   G  P+V TYSI+I+  C+  ++   
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM + G   N++T+  L++ + +A +     +++ +M   G   + ITYN L+  
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C +GK+E A+ +L  M + G + +  T+N+I R + K G+V  A  +Y  +      P+
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             TY  +M              L ++M+E+ + PN
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 187/414 (45%), Gaps = 37/414 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K  +F+ A   I  M    ++++  T++ L+  Y   G+ AEA+     M 
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P    ++  I  LC+  R S+A Q   D L +   PDV+ Y  L+ G+CR GN+ 
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391

Query: 270 EAERVFREMKM-----------------------------------AGIQPNVYTYSIVI 294
           +A  +F E++                                     GI P++ TY+I++
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +  C+ G ++ A + F EML  G E +S  +   +   +K   T +   +  +M   G  
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP 511

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D I YN ++D  CK G LE+A ++L  MV  G  P+  T+  I     + G +     +
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M      P+ VTY +L+   A     +       EM+E  + PNV TY  LI   C 
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   + AY +  EM+ EK + P    Y +++ +    G  Q+   L ++M+DRG
Sbjct: 632 VRRMDQAYNFFAEMV-EKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/413 (22%), Positives = 194/413 (46%), Gaps = 16/413 (3%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNV------------ 179
           L  F W  ++P F  S  ++  ++ +  +      A+  ++ + + N+            
Sbjct: 99  LRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCV 158

Query: 180 --EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
             E++V    +L+  Y +  +  + +  F++M +   +PD    + ++ IL  K   S+A
Sbjct: 159 SSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKA 218

Query: 238 QSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
              + ++ +   +P ++ Y  L+  +C+ G + +   +  EM+  G  PN  TY+++I+ 
Sbjct: 219 VEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING 278

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           L + G+  +A  +  EML+ G + ++ T+N L+  +       + L +  +M   G    
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPT 338

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TYN  I   CK G++ DA++ L+ M+     P+  ++N +     +LG++  A  ++ 
Sbjct: 339 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +++ +   P  VTYN L+         ++  +LK EM    + P++ TY IL+   C MG
Sbjct: 399 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             + A ++  EM+ E  L+  S  Y   +    + G   +   L E+M+ +GF
Sbjct: 459 SLSMAQEFFDEMLHEG-LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 174/358 (48%), Gaps = 2/358 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M    ++ T+ T++ L+  Y + G   + +   + M+  GCAP+ + ++++I+ L +K  
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 234 ASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+    + LK   +     Y  L+ G+   G ++EA  +  EM + G  P V TY+ 
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
            I  LC+ G+++ A    ++ML     P+ +++N L+  + +     K   ++++++ + 
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                +TYN L+D  C+ G+LE A ++   M+ +G  P+  T+ ++     K+G ++ A 
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
             + +M     E ++  Y   +        T     L++EM      P++  Y +++   
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           C +G+   A + +++M+ +  + P    Y  ++      G+L+K  E+  +M+ +G T
Sbjct: 525 CKLGNLEEASELLQKMVSDGVI-PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLT 581



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 172/386 (44%), Gaps = 5/386 (1%)

Query: 85  LNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEF 144
            N      +LSL    +    S + +T    I   C +      +Q LS        P+ 
Sbjct: 315 FNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDV 374

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V    L +    L   ++ F L     D ++S  +  T+ T++ L+    R G    A  
Sbjct: 375 VSYNTLIYGYCRLGNLMKAFLL----FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
               M   G APD + ++I+++  C+    S AQ FFD  L +  E D   Y   + G  
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G+ S A  +  EM   G  P++  Y++V+D LC+ G +  A ++  +M+  G  P+ +
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+ +++  H++  R  K  +++ +M   G     +TY  LI  H   G+LE A    + M
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  PN  T+N +   + K+  ++ A+  + +M +    PN  +Y IL+       + 
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILI 469
              L L K+M +  V+P+  T+  L+
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALL 696



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   KVR+ D A++F   M  + +     +++IL+      G   EA+  + +M 
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681

Query: 211 EYGCAPDKIAFSIVISIL---CRKRRASEAQSFFDS 243
           + G  PD    S ++  L   C+ +   + +S  DS
Sbjct: 682 DRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 234/482 (48%), Gaps = 35/482 (7%)

Query: 55  EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRH 114
           E TL  E  H L+ +  R+         P L  D        GF     A + +PS+   
Sbjct: 44  EGTLRPEDAHDLLDELQRR-------GTPVLGRDLN------GFL---AALARAPSSA-- 85

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHF 170
               +CG     P L V + FN   +R +   V SP    Y  +++   +  + +LA  F
Sbjct: 86  ----ACGSG---PALAV-ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAF 137

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILC 229
              +    + + +   + L++ +  A    EA+    +R  E GC PD  ++SI++  LC
Sbjct: 138 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 197

Query: 230 RKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            + ++ +A      + +      PDV+ YT ++  + + G++++A  +F+EM   GI P+
Sbjct: 198 DQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPD 257

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + TYS V+ ALC+   + +A     +M+  G  P++ T+NNL+  +    + ++ ++V+ 
Sbjct: 258 LVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 317

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+R     D +T N L+   CK GK+++A  V ++M  KG NP+  ++ ++    +  G
Sbjct: 318 EMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKG 377

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +     ++  M      P+  T+++L++ +A     D  + +  EM ++ V+P+V TY 
Sbjct: 378 CLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYT 437

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C +G  ++A +   +MI++  + P    Y  ++Q     G L K +EL+ ++++
Sbjct: 438 TVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMN 496

Query: 527 RG 528
            G
Sbjct: 497 NG 498



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 185/386 (47%), Gaps = 4/386 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  +++   K R    A  F+  M ++ V     T++ L+  Y   G   EAV  
Sbjct: 256 PDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 315

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
           F  M  +   PD +  ++++  LC+  +  EA+  FD++  K + PDV  Y  ++ G+  
Sbjct: 316 FKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYAT 375

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +   +F  M   GI P++YT+S++I A   CG + +A  +F EM + G +P+ +T
Sbjct: 376 KGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 435

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    +  + +  ++ +NQM   G   D   Y+ LI   C  G L  A +++  ++
Sbjct: 436 YTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIM 495

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G   +   F+ I   + KLG +  A  ++    ++   P+ V Y++LM  +      +
Sbjct: 496 NNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKME 555

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L++   M    +EPNV  Y  L+  YC +G  +      REM+ +K +KP + +Y ++
Sbjct: 556 KALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREML-QKGIKPSTILYNII 614

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L  AG+    +    +M + G  
Sbjct: 615 IDGLFVAGRTVPAKVKFHEMTESGIA 640



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 175/333 (52%), Gaps = 6/333 (1%)

Query: 146 HSPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            +PD++   I L G   +  L       DLM    +   + TFS+L++ Y   G+  +A+
Sbjct: 359 QNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAM 418

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             FN M ++G  PD + ++ VI+ LCR  +  +A   F+ + D+   PD   Y  L++G+
Sbjct: 419 IIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 478

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G++ +A+ +  E+   G++ ++  +S +I+ LC+ G+I  A ++F   + VG  P++
Sbjct: 479 CTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDA 538

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + ++ LM  +    + EK L+V++ M   G E + + Y  L++ +CK G++++ + +   
Sbjct: 539 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFRE 598

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++KG  P+   +N+I   +   G    A   + +M +     N  TYNI+++ F  ++ 
Sbjct: 599 MLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRC 658

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            D  + L KE+    V+ ++ T   L TM  GM
Sbjct: 659 FDEAIFLFKELRAMNVKIDIIT---LNTMIAGM 688



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 38/321 (11%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+Y    +I         D A    + M+   V+  V T++ ++    R G   +A+ 
Sbjct: 395 APDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAME 454

Query: 205 AFNRMEEYGCAPDKIA-----------------------------------FSIVISILC 229
            FN+M + G APDK A                                   FS +I+ LC
Sbjct: 455 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLC 514

Query: 230 RKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  R  +AQ+ FD ++     PD +VY+ L+ G+C  G + +A RVF  M  AGI+PNV 
Sbjct: 515 KLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 574

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y  +++  C+ G+I     +F EML+ G +P++I +N ++     A RT      +++M
Sbjct: 575 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEM 634

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              G   +  TYN ++    K+   ++AI +   +       +  T N +   + +   V
Sbjct: 635 TESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 694

Query: 409 NGAHRMYGKMKDLKCEPNTVT 429
             A  ++  +      P  VT
Sbjct: 695 EEAKDLFASISRSGLVPCVVT 715


>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
          Length = 378

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 172/343 (50%), Gaps = 2/343 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           +D F I ++ +  AG    AV  F  M  +G      +F+ ++  L ++    EA   FD
Sbjct: 1   MDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFD 60

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
            ++D++ PD+  YT L+  WC A N+ EA RV+ EM   G++P+V  ++ +I+ L R  +
Sbjct: 61  RMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 120

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
              A  +F  M   G  PN  T+  L+R H K  + +  ++ + +M+ +GC+ D  TY  
Sbjct: 121 RPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTC 180

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  +    +++    +L  M +KGC P+  T+N + + ++     + A R+Y KM    
Sbjct: 181 LLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKG 240

Query: 423 CEPNTVTYNILMQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            EP   TYN++M+  F   ++  M   + +EM    + P+VN+Y + I  +   G    A
Sbjct: 241 LEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEA 300

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            KYI EMI +K +K     Y        +AG+     EL +K+
Sbjct: 301 CKYIEEMI-QKGMKTPQIDYNKFAADFSKAGKPDILYELAQKV 342



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 37/272 (13%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++ L+  +  A    EA   +N M E G  PD +  + +I  L R +R  EA   F+ +
Sbjct: 72  SYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELM 131

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           K K   P+V  YT L+R  C+ G +  A R F EM+  G QP+V TY+ ++       ++
Sbjct: 132 KAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRM 191

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            R   +  EM + GC P+  T+N L+++    +  +   ++Y +M + G E    TYN +
Sbjct: 192 DRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMM 251

Query: 364 ------------------------------------IDCHCKDGKLEDAIKVLNSMVRKG 387
                                               I+ H + G+ E+A K +  M++KG
Sbjct: 252 MKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKG 311

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
                  +N      SK G  +  + +  K+K
Sbjct: 312 MKTPQIDYNKFAADFSKAGKPDILYELAQKVK 343



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 2/192 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D+A    + M+    +  V T++ L+  Y  A            M + GC PD   ++
Sbjct: 155 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN 214

Query: 223 IVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG-NISEAERVFREMKM 280
            +I +L  +    +A   +  + K   EP +  Y  +++ +   G N      V+ EM  
Sbjct: 215 ALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHR 274

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            GI P+V +Y++ I+   R G+   A     EM++ G +   I +N       KA + + 
Sbjct: 275 KGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDI 334

Query: 341 VLQVYNQMKRLG 352
           + ++  ++K  G
Sbjct: 335 LYELAQKVKFTG 346


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 173/358 (48%), Gaps = 3/358 (0%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           +++SR V   V T++IL+R +   G   + +  F  ME  GC P+ + ++ +I   C+  
Sbjct: 1   MIRSR-VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 59

Query: 233 RASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           R  EA     S+  K  +P++I Y  ++ G CR G++ EA  +  EM   G  P+  TY+
Sbjct: 60  RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +++  C+ G   +A  + AEM+  G  P+ +T+  L+    KA    + ++ ++QM+  
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G   +  TY  LID   + G L +A ++LN M   G +P+  T+N        L  +  A
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  +M +    P+ V+Y+ ++  F      D   ++K+EM E  V P+  TY  LI  
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 299

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            C M     A    +EM+ +  L P    Y  ++      G L K   L ++M+ +GF
Sbjct: 300 LCEMRRLTEACDLSQEML-DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 356



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++Y   I + G   V +          M+       V T++ L+  Y + G   EA  
Sbjct: 7   SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 66

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M   G  P+ I+++++I+ LCR+    EA    + +  K F PD + Y  L+ G+C
Sbjct: 67  LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + GN  +A  +  EM   G+ P+V TY+ +I+++C+   + RA + F +M   G  PN  
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+    +     +  ++ N+M   G     +TYN  I  HC   ++E+A+ V+  M
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V KG  P+  +++ I     + G+++ A +M  +M +    P+ VTY+ L+Q     +  
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
                L +EM +  + P+  TY  LI  YC  G  N A     EMI +  L P +  Y +
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL-PDAVTYSV 365

Query: 504 VLQQLRRAGQLQKHEELVEKMV 525
           ++  L +  + ++ + L+ K++
Sbjct: 366 LINGLNKQARTREAKRLLFKLI 387



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 192/430 (44%), Gaps = 52/430 (12%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K+ + D A+  +  M S+ ++  + ++++++    R G   EA      M 
Sbjct: 48  YNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMG 107

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD++ ++ +++  C++    +A     + +++   P V+ YT L+   C+A N++
Sbjct: 108 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 167

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A   F +M++ G++PN  TY+ +ID   R G +  A+ +  EM E G  P+ +T+N  +
Sbjct: 168 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 227

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H    R E+ L V  +M   G   D ++Y+ +I   C+ G+L+ A ++   MV KG +
Sbjct: 228 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 287

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A T++ + + + ++  +  A  +  +M D+   P+  TY  L+  +      +  L L
Sbjct: 288 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 347

Query: 450 KKEMEENEVEPNVNTYRILIT--------------------------------------- 470
             EM      P+  TY +LI                                        
Sbjct: 348 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 407

Query: 471 -----------MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
                       +C  G  + A +    M+ E+  KPG +VY +++    R G L K   
Sbjct: 408 IEFKSVVALIKGFCMKGLMHEADRVFESMV-ERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466

Query: 520 LVEKMVDRGF 529
           L ++M+  GF
Sbjct: 467 LYKEMIHSGF 476



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 1/218 (0%)

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M+     PN  T+N L+R        +K L  + +M+R GC  + +TYN LID +CK G+
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +++A  +L SM  KG  PN  ++N+I   + + G +  A  +  +M      P+ VTYN 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  +    +    L +  EM  N V P+V TY  LI   C   + N A ++  +M   +
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIR 179

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            L+P    Y  ++    R G L +   ++ +M + GF+
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 217



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 131/340 (38%), Gaps = 57/340 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+  I+    + + + A   +  M  + +   V ++S ++  + R G    A      M 
Sbjct: 223 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 282

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           E G +PD + +S +I  LC  RR +EA      + D    PD   YT L+  +C  G+++
Sbjct: 283 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 342

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL-------------------------------- 297
           +A  +  EM   G  P+  TYS++I+ L                                
Sbjct: 343 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402

Query: 298 ------------------CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
                             C  G +  A  VF  M+E   +P    +N ++  H +     
Sbjct: 403 ENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLP 462

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           K   +Y +M   G    T+T   LI    K+G  E+  +V+   +R  C  N +    + 
Sbjct: 463 KAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRS-CRLNEAELAKVL 521

Query: 400 RCIS-KLGDVNG---AHRMYGKMKDLKCEPNTVTYNILMQ 435
             I+ K G++       R+Y K+  LKC  ++V    L Q
Sbjct: 522 VEINHKEGNMEAVLNVSRLYNKLS-LKCVASSVPPGALTQ 560


>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 186/401 (46%), Gaps = 9/401 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRN-VEITVDTF 186
           L FF W   + ++ H P  Y++M+++      KV+QF +    ++ MK  N   + V+  
Sbjct: 41  LRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNKTTVPVEVL 100

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
            +++R+Y    L      A  R       P+  AF++++  LC+     +A++ +  ++ 
Sbjct: 101 LVILRKYTEKYLTHVQKFARKRRIRVKTQPEINAFNLLLDALCKCCLVEDAETLYKKMRK 160

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             +P+   Y   V GWCR  N +   ++  EM   G +P+ + Y+  ID  C+ G +T A
Sbjct: 161 TVKPNAETYNIFVFGWCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEA 220

Query: 307 HDVFAEMLEVGCE---PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            D+F  M   G     P + T+  ++    +  R E+  ++   M   GC  D  TY  +
Sbjct: 221 VDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEI 280

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C  GK+++A K L  M  K   P+  T+N   + +        A ++YG+M +L C
Sbjct: 281 IEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNC 340

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  TYN+L+ MF      D   +  +EM+     P+++TY ++I          +A  
Sbjct: 341 IPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNCNKVEDACF 400

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            + E+I  K +K     ++  L QL   G LQ    + E M
Sbjct: 401 LLEEVI-NKGIKLPYKKFDSFLMQLSVIGDLQAIHRVSEHM 440



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 4/239 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCA---PDKIAFSIVISILCRKRRASEAQSFF 241
            ++  +  Y +AG+  EAV  F  M   G +   P    ++I+I  L +  R  E     
Sbjct: 203 AYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLI 262

Query: 242 DSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             +      PDV  Y  ++ G C  G I EA +   EM     +P++ TY+  +  LC  
Sbjct: 263 GHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDN 322

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +   A  ++  M+E+ C P+  T+N L+ +  +    +   + + +M   GC  D  TY
Sbjct: 323 KKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTY 382

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           + +ID      K+EDA  +L  ++ KG       F+     +S +GD+   HR+   M+
Sbjct: 383 SVMIDGLFNCNKVEDACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDLQAIHRVSEHMR 441


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 196/424 (46%), Gaps = 25/424 (5%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF-IDLMKS----RNVEITVDTF 186
           LSFFNW+  RP F H+   Y  M+N+  + R   +A    I ++KS     +V   ++ F
Sbjct: 85  LSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVF 144

Query: 187 ------------------SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
                             + ++    +  L  E    +  +     +P+   F+ +++  
Sbjct: 145 RKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGY 204

Query: 229 CRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C+     EA+ +   + +    PD   YT+L+ G CR   +  A  VF  M   G Q N 
Sbjct: 205 CKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNE 264

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            +Y+ +I  LC  G+I  A  +FA+M E  C P   T+  L+     + R  + L ++N+
Sbjct: 265 VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           MK  GCE +  TY  LID  CK+ K+++A K+L+ M  KG  P+  T+N +     K G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A  +   M+   C PNT TYN L+      +     + L  +M E ++ P++ TY  
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI   C +    +AY+ +  ++ E  L P    Y + +  L + G++++   L + +  +
Sbjct: 445 LIHGQCKVNDLESAYRLL-SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503

Query: 528 GFTA 531
           G  A
Sbjct: 504 GVKA 507



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 173/345 (50%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
           T++ L+  + R      A   F  M + GC  ++++++ +I  LC   R +EA   F D 
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +D   P V  YT L+     +G   EA  +F EMK  G +PNV+TY+++ID LC+  ++
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  + +EM E G  P+ +T+N L+  + K    +   ++ + M+   C  +T TYN L
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL 410

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   CK  K+  A+ +LN M+ +  +P+  T+N +     K+ D+  A+R+   M +   
Sbjct: 411 ICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGL 470

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  TY++ +         +    L   ++   V+ N   Y  LI  YC +G  + AY 
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYS 530

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +  M+ + CL P S  Y ++++ L +  ++++   LV KM+  G
Sbjct: 531 LLERMLNDACL-PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 184/367 (50%), Gaps = 2/367 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A   +  M  + +  +V T++ L+  Y + G+  +A    + ME
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
              C P+   ++ +I  LC+KR+  +A +  +  L+ K  P +I Y +L+ G C+  ++ 
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+   M   G+ P+ +TYS+ ID LC+ G++  A  +F  +   G + N + +  L+
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K  + +    +  +M    C  ++ TYN LI+  CK+ K+++A  ++  M+  G  
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+ ++   + K G  + A +++  M  L  +P+  TY   +  + +    + V  +
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M E  + P++ TY +LI  Y  +G  + A+ +++ M++  C KP   +  ++++ L 
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC-KPSLYIVSILIKNLS 695

Query: 510 RAGQLQK 516
              ++++
Sbjct: 696 HENRMKE 702



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 188/444 (42%), Gaps = 66/444 (14%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+I    K R+   A   ++ M  R +  ++ T++ L+    +      A    + M 
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD+  +S+ I  LC++ R  EA + FDS+K K  + + ++YT L+ G+C+ G I 
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +   M      PN YTY+++I+ LC+  ++  A  + A+ML +G +P  +T+  L+
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADT-------------------------------- 357
              +K    +  L+V+N M  LG + D                                 
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646

Query: 358 ---ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS----------- 403
              +TY  LID + + G    A   L  MV  GC P+    +++ + +S           
Sbjct: 647 PDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSE 706

Query: 404 ----KLGDVNG--------------AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
                + +VN               A +++ KM +  C  +   Y  L+  F   +  + 
Sbjct: 707 IGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEE 766

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L   M+E  + P+ + Y  L+   C +G +  A + +  M+E   L P    Y++++
Sbjct: 767 AQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL-PLLESYKLLV 825

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L   G  +K + +   ++  G+
Sbjct: 826 CGLYIEGSNEKAKAVFHGLLSCGY 849



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 136/337 (40%), Gaps = 30/337 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    K ++   A   +  M +  V+ TV T++IL+   ++ G    A+  FN M 
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   ++  +     +    E       + ++   PD++ YT L+ G+ R G   
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTH 666

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI--TR---------------------- 305
            A    + M   G +P++Y  SI+I  L    ++  TR                      
Sbjct: 667 RAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKT 726

Query: 306 -----AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
                A  +F +M+E GC  +   +  L+    +  R E+   + + MK  G       Y
Sbjct: 727 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 786

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N L+DC CK G   +A++++++MV  G  P   ++ ++   +   G    A  ++  +  
Sbjct: 787 NSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLS 846

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
                + V + +L+         D   +L   MEE +
Sbjct: 847 CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKD 883


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 200/432 (46%), Gaps = 37/432 (8%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ--------------------------FD 165
           L FF W  ++  F H+ + Y  +++L  + R                           FD
Sbjct: 88  LKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFD 147

Query: 166 LAWHFIDLMKSRNVEIT-VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           + W       +RN+ ++    F +L   +V  GL  EA   F+RM  +   P   + + +
Sbjct: 148 MLW------STRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 201

Query: 225 ISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +  L +       + FF D +     P V  Y  ++   C+ G++  + R+F +M+  G+
Sbjct: 202 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 261

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P+V TY+ +ID   + G +     +F EM +VGC P+ IT+N L+  + K  +  +  +
Sbjct: 262 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 321

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            +++MK  G + + +TY+ LID  CK+G ++ AIK+L  M R G  PN  T+  +     
Sbjct: 322 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC 381

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G++  A ++   M     + N VTY  L+     +       ++ + M ++ + PN  
Sbjct: 382 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 441

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            Y  L+  Y       +A K +++M E  C +KP   +Y  ++       +L++ + ++E
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTE--CNIKPDLILYGSIIWGHCSQRKLEETKLILE 499

Query: 523 KMVDRGFTARPL 534
           +M  RG +A P+
Sbjct: 500 EMKSRGISANPV 511



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 179/383 (46%), Gaps = 4/383 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +I+  GKV   +      + MK       + T++ L+  Y +      A  
Sbjct: 262 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 321

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWC 263
            F+ M+  G  P+ + +S +I   C++     A     D  +    P+   YT+L+   C
Sbjct: 322 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC 381

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AGN++EA ++  +M  AG++ N+ TY+ ++D LC+ G++  A +VF  ML+ G  PN  
Sbjct: 382 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 441

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +  L+  ++KA R E  +++  QM     + D I Y  +I  HC   KLE+   +L  M
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 501

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             +G + N      I     K G  + A   + +M+D+  E   VTY +L+     +   
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV 561

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           ++ +     M    ++PNV  Y  LI   C      +A K   EM + + + P  + +  
Sbjct: 562 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM-QCRGMTPDITAFTA 620

Query: 504 VLQQLRRAGQLQKHEELVEKMVD 526
           ++    + G LQ+   L+ +M +
Sbjct: 621 LIDGNLKHGNLQEALVLISRMTE 643



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 181/402 (45%), Gaps = 39/402 (9%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L   F + M    +  +V T+++++    + G    +   F +M E G +PD + ++ +I
Sbjct: 213 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 272

Query: 226 SILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
               +     E  S F+ +KD    PD+I Y  L+  +C+   +  A   F EMK  G++
Sbjct: 273 DGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 332

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV TYS +IDA C+ G +  A  +  +M   G  PN  T+ +L+  + KA    +  ++
Sbjct: 333 PNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 392

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            N M + G + + +TY  L+D  CK G++ +A +V  SM++ G +PN   +  +     K
Sbjct: 393 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 452

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYN-----------------ILMQM----------- 436
              +  A ++  +M +   +P+ + Y                  IL +M           
Sbjct: 453 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 512

Query: 437 --------FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
                   F   KS+D  L   +EM++  VE  + TY +LI   C  G    A  Y   M
Sbjct: 513 STTIIDAYFKAGKSSD-ALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRM 571

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +    L+P  +VY  ++  L     ++  ++L ++M  RG T
Sbjct: 572 LSLG-LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMT 612



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 160/341 (46%), Gaps = 2/341 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           T++ L+    +AG   EA    N M + G   + + ++ ++  LC+  R  EA+  F S 
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           LKD   P+  VYT LV G+ +A  + +A ++ ++M    I+P++  Y  +I   C   ++
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +  EM   G   N +    ++  + KA ++   L  + +M+ +G EA  +TY  L
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  C+ G +E A+     M+  G  PN + +  +   +     +  A +++ +M+    
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+   +  L+       +    L L   M E  +E +++ Y  L++ +   G  + A K
Sbjct: 612 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 671

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +  EMIE+  L P   +   +L++  + GQL +  EL  +M
Sbjct: 672 FFNEMIEKGIL-PEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 153/322 (47%), Gaps = 15/322 (4%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            ++ LV  Y++A    +A+    +M E    PD I +  +I   C +R+  E +   + +
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 501

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           K +    + ++ T ++  + +AG  S+A   F+EM+  G++  + TY ++ID LC  G +
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV 561

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A D F  ML +G +PN   + +L+      +  E   +++++M+  G   D   +  L
Sbjct: 562 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTAL 621

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID + K G L++A+ +++ M       +   +  +    S+ G+++ A + + +M +   
Sbjct: 622 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEME------ENEVEPNVNTYRILITMYCGMGH 477
            P  V    L++ +      D  ++LK EME      E + +   N   + +T++     
Sbjct: 682 LPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFDAQLAYNEQGVNLTLH----- 736

Query: 478 WNNAYKYIREMIEEKCLKPGSS 499
              AY Y++  I+ +  + G+S
Sbjct: 737 ---AYLYLKFDIQHQLNRFGTS 755


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 165/330 (50%), Gaps = 1/330 (0%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVR 260
           EA   + ++ + G AP+   F++++    R      A+  FD ++   +P V+ +  L+ 
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLIS 228

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G CRA ++   + +++EM   G++P+VYTY  +I   CR G++  A  +F EM + G  P
Sbjct: 229 GMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNP 288

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N++ F  L+  H K       + +Y  M+  G   D + YN L++  C+   L+ A  ++
Sbjct: 289 NAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIV 348

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M   G  P+  T+  +     K G ++ A  +  KM + +   + VTY  L+   + +
Sbjct: 349 EEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKA 408

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
                  ++ +EM E  +EP+  TY ++I  +C  G     +K ++EM + K  KPG   
Sbjct: 409 GRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEM-QNKGKKPGVVT 467

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           Y +++  L + GQ++  + L+  M++ G +
Sbjct: 468 YNVIMNGLCKLGQMKNADMLLHAMLNIGVS 497



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 1/286 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I+   + R  D        M    V+  V T+  L++ + R G    AV  FN M 
Sbjct: 223 FNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMR 282

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ + F+ +I   C++   +     +  ++ +   PD++ Y  LV G CRA N+ 
Sbjct: 283 DTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLK 342

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            AE +  EMK AG++P+  TY+ +ID  C+ G++  A D+  +M E     + +T+  L+
Sbjct: 343 AAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA R     +V  +M     E D  TY  +ID  C+ G ++   K+L  M  KG  
Sbjct: 403 SGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKK 462

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           P   T+N+I   + KLG +  A  +   M ++   P+ +TYNIL+ 
Sbjct: 463 PGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLD 508



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 41/295 (13%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y     + G  R  + + A    + M+   V      F+ L+  + + G     +  
Sbjct: 253 PDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDL 312

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           +  M   G  PD +A++ +++ LCR R    A+S  + +K+   +PD + YT L+ G C+
Sbjct: 313 YQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCK 372

Query: 265 AGNIS-----------------------------------EAERVFREMKMAGIQPNVYT 289
            G +                                    +AERV REM  A ++P+  T
Sbjct: 373 DGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTT 432

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y++VIDA CR G +     +  EM   G +P  +T+N +M    K  + +    + + M 
Sbjct: 433 YTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAML 492

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            +G   D ITYN L+D  CK GK+ ++ ++ +S   KG  P+ + +  +   ++K
Sbjct: 493 NIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTSLISELAK 544



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 70/301 (23%)

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR------ 350
           + R      A+  + ++L+ G  P +  FN LMR  V+        +V+++M+R      
Sbjct: 161 MSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTV 220

Query: 351 ----------------------------LGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
                                       +G + D  TY  LI   C+ G++E+A+K+ N 
Sbjct: 221 VTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNE 280

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY------GKMKDL--------------- 421
           M   G NPNA  F  +     K G+VN    +Y      G M DL               
Sbjct: 281 MRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARN 340

Query: 422 --------------KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
                           +P+ VTY  L+         DM + +K++M E EV  +  TY  
Sbjct: 341 LKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTA 400

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI+     G   +A + +REM+ E  L+P ++ Y MV+    R G ++   +L+++M ++
Sbjct: 401 LISGLSKAGRPVDAERVLREMM-EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK 459

Query: 528 G 528
           G
Sbjct: 460 G 460


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 233/482 (48%), Gaps = 35/482 (7%)

Query: 55  EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRH 114
           E TL  E+ H L+ +  R+         P L+ D        GF     A + +PS+   
Sbjct: 42  EGTLRPEEAHDLLDELQRR-------GTPVLDRDLN------GFL---AALARAPSSA-- 83

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHF 170
               +CG     P L V + FN   +R +   V SP    Y  +++   +  + +LA  F
Sbjct: 84  ----ACGSG---PALAV-ALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAF 135

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILC 229
              +    + +     S L++ +  A    EA+    +R  E GC PD  +++I++  LC
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLC 195

Query: 230 RKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            + ++ +A      + +      PDV+ Y  ++ G+ + G++++A  +F+EM   GI P+
Sbjct: 196 NQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 255

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + TYS V+ ALC+   + +A     +M+  G  P++ T+NNL+  +    + ++ ++V+ 
Sbjct: 256 LVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 315

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M+R     D +  N L+   CK GK+++A  V ++M  KG NP+  ++ ++    +  G
Sbjct: 316 EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKG 375

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            +     ++  M      P   T+N+L++ +A     D  + +  EM ++ V+P+V TY 
Sbjct: 376 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C +G  ++A +   +MI++  + P    Y  ++Q     G L K +EL+ ++++
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVV-PDKYAYHCLIQGFCTHGSLLKAKELISEIMN 494

Query: 527 RG 528
            G
Sbjct: 495 NG 496



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 184/386 (47%), Gaps = 4/386 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  +++   K R  D A  F+  M ++ V     T++ L+  Y   G   EAV  
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
           F  M      PD +A + ++  LC+  +  EA+  FD++  K + PDV  YT ++ G+  
Sbjct: 314 FKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYAT 373

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +   +F  M   GI P + T++++I A   CG + +A  +F EM + G +P+ +T
Sbjct: 374 KGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT 433

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    +  + +  ++ +NQM   G   D   Y+ LI   C  G L  A ++++ ++
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM 493

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G   +   F  I   + KLG V  A  ++    ++   P+ V YN+LM  +      +
Sbjct: 494 NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKME 553

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             L++   M    +EPNV  Y  L+  YC +G  +      REM+ +K +KP + +Y ++
Sbjct: 554 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML-QKGIKPSTILYNII 612

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L  AG+    +    +M + G  
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIA 638



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 194/388 (50%), Gaps = 8/388 (2%)

Query: 146 HSPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            +PD++   I L G   +  L       DLM    +   + TF++L++ Y   G+  +A+
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 416

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             FN M ++G  P  + +  VI+ LCR  +  +A   F+ + D+   PD   Y  L++G+
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G++ +A+ +  E+   G++ ++  +  +I+ LC+ G++  A ++F   + VG  P++
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + +N LM  +    + EK L+V++ M   G E + + Y  L++ +CK G++++ + +   
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++KG  P+   +N+I   + + G    A   + +M +     N  TY+I+++    ++ 
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA--YKYIREMIEEKCLKPGSSV 500
            D  + L KE+    V+ ++ T   L TM  GM         K +   I    L P +  
Sbjct: 657 FDEAIFLFKELRAMNVKIDIIT---LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y +++  L + G +++ E++   M + G
Sbjct: 714 YSIMITNLIKEGLVEEAEDMFSSMQNAG 741



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 1/266 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   I  + +  + + +  F  ++    + G   +A + F+     G  PD + +++++ 
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C   +  +A   FD++     EP+V+ Y  LV G+C+ G I E   +FREM   GI+P
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +   Y+I+ID L   G+   A   F EM E G   N  T++ ++R   K    ++ + ++
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 664

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +++ +  + D IT N +I    +  ++E+A  +  S+ R G  P A T++++   + K 
Sbjct: 665 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKE 724

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYN 431
           G V  A  M+  M++  CEP++   N
Sbjct: 725 GLVEEAEDMFSSMQNAGCEPDSRLLN 750


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 194/419 (46%), Gaps = 38/419 (9%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  LY+  I+  GK    D+AW F   +K++ ++    +++ ++    +AG   EA   
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 306

Query: 206 FNRME-----------------------------------EYGCAPDKIAFSIVISILCR 230
           F +ME                                   E GC P  ++F+ +++ L +
Sbjct: 307 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 366

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           KR+  EA S F+ +K   EP+   Y  ++   C  G + EA R+  EM+ A + PN+ T 
Sbjct: 367 KRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTV 426

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I++D LC+  ++  A+ +F    + GC P+ +T+ +L+    K  + ++  +++ +M  
Sbjct: 427 NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 486

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G  A+ + Y  LI      G+ ED  K+   ++R+GC P+ +  N    C+ K G+V  
Sbjct: 487 AGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 546

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              ++  ++     P+  +Y+IL+     +        +   M++     +   Y  ++ 
Sbjct: 547 GRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVD 606

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +C  G  + AY+ + EM +EKC++P  + Y  ++  L +  +L +   L E+   +G 
Sbjct: 607 GFCKSGKVHKAYEILEEM-KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI 664



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 195/421 (46%), Gaps = 10/421 (2%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAW 168
           TV  ++++ C  R    L +    F   + R     +PD   Y  +I+  GK  Q D A+
Sbjct: 425 TVNIMVDRLCKARK---LEEAYKIFESASQRG---CNPDCVTYCSLIDGLGKKGQVDEAY 478

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
              + M           ++ L+R +   G   +    F  +   GC PD    +  +  +
Sbjct: 479 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCV 538

Query: 229 CRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            +     + +  F+ ++   F PDV  Y+ L+ G  +AG   E   +F  MK  G   + 
Sbjct: 539 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 598

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             Y+ V+D  C+ G++ +A+++  EM E   +P   T+  ++    K  R ++   ++ +
Sbjct: 599 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
            K  G E + + Y+ LID   K G++++A  +L  M++KG  PN  T+N +   + K  +
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +N A   +  MK++KC PNT TY+IL+      +  +      ++M++  + PNV TY  
Sbjct: 719 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 778

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I+    +G+  +AY    E  +     P ++ +  +++ +  A +  +  ++ E+   R
Sbjct: 779 MISGLAKVGNITDAYSLF-ERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLR 837

Query: 528 G 528
           G
Sbjct: 838 G 838



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 165/347 (47%), Gaps = 3/347 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           L    VRA    +AV A   M      P   A++++I  L   RR   A      +++  
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           +E  V ++T LVR   R G +++A  +  E+K + ++P++  Y++ ID   + G +  A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
             F E+   G +P+ +++ +++ V  KA R  +  +++ QM+          YN +I  +
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
              G+ EDA K+L  +  +GC P+  +FN I  C+ K   V+ A  ++  MK    EPN+
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNS 388

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TYNI++ M       +   ++  EME   + PN+ T  I++   C       AYK    
Sbjct: 389 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
             +  C  P    Y  ++  L + GQ+ +   L EKM+D G  A P+
Sbjct: 449 ASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 494



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 183/390 (46%), Gaps = 7/390 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP F      Y  +I    + R+ + A   +  M+    E+ V  F+ LVR   R G  A
Sbjct: 176 RPAF----SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVA 231

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A+   + ++     PD + +++ I    +      A  FF  LK +  +PD + YT+++
Sbjct: 232 DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMI 291

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
              C+AG + EAE +F +M+     P  Y Y+ +I      G+   A+ +   + E GC 
Sbjct: 292 WVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCI 351

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ ++FN+++    K  + ++ L ++  MK+   E ++ TYN +ID  C  G++E+A ++
Sbjct: 352 PSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRI 410

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L+ M      PN  T N++   + K   +  A++++       C P+ VTY  L+     
Sbjct: 411 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 470

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
               D   +L ++M +     N   Y  LI  +   G   + +K  +E+I   C KP  +
Sbjct: 471 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC-KPDLT 529

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +    +  + +AG+++K   + E +   GF
Sbjct: 530 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 559



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 182/382 (47%), Gaps = 3/382 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L+  ++    +  Q   A   +D +K   +E  +  +++ +  + +AG    A   F+ +
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNI 268
           +  G  PD ++++ +I +LC+  R  EA+  F  ++ ++  P    Y  ++ G+  AG  
Sbjct: 276 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 335

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A ++   ++  G  P+V +++ ++  L +  ++  A  +F E+++   EPNS T+N +
Sbjct: 336 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNII 394

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + +     R E+  ++ ++M+      + +T N ++D  CK  KLE+A K+  S  ++GC
Sbjct: 395 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 454

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           NP+  T+  +   + K G V+ A+R++ KM D     N V Y  L++ F      +   K
Sbjct: 455 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 514

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + KE+     +P++      +      G      + I E I      P    Y +++  L
Sbjct: 515 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG-RMIFEDIRSYGFLPDVRSYSILIHGL 573

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            +AGQ ++   +   M  +GF 
Sbjct: 574 TKAGQARETSNIFHAMKQQGFA 595



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 128/270 (47%), Gaps = 4/270 (1%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG+ R+    +H    MK +   +    ++ +V  + ++G   +A      M+E    P 
Sbjct: 576 AGQARETSNIFH---AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 632

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
              +  ++  L +  R  EA   F+  K K  E +V++Y++L+ G+ + G I EA  +  
Sbjct: 633 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 692

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EM   G+ PNVYT++ ++DAL +  +I  A   F  M E+ C PN+ T++ L+    +  
Sbjct: 693 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 752

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           +  K    +  M++ G   + +TY  +I    K G + DA  +       G  P+A++FN
Sbjct: 753 KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFN 812

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            +   +S       A++++ + +   C  N
Sbjct: 813 ALIEGMSNANRAMEAYQVFEETRLRGCRIN 842



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 17/255 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA      M 
Sbjct: 636 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 695

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ ++  L +    +EA   F S+K+ K  P+   Y+ L+ G CR    +
Sbjct: 696 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 755

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   +++M+  G+ PNV TY+ +I  L + G IT A+ +F      G  P++ +FN L+
Sbjct: 756 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 815

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                A+R  +  QV+ + +  GC  +                ++  I +L+++ +  C 
Sbjct: 816 EGMSNANRAMEAYQVFEETRLRGCRIN----------------IKSCISLLDALNKSECL 859

Query: 390 PNASTFNMIFRCISK 404
             A+    + R I+K
Sbjct: 860 EQAAIVGAVLREIAK 874



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 37/308 (12%)

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +L     RA  + +A      M+    +P    Y+++I AL    +  RA ++  +M E
Sbjct: 148 AHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQE 207

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           VG E     F  L+R   +  +    L + +++K    E D + YN  IDC  K G ++ 
Sbjct: 208 VGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 267

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM----------------- 418
           A K  + +  +G  P+  ++  +   + K G +  A  ++ +M                 
Sbjct: 268 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 327

Query: 419 ------------------KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
                             ++  C P+ V++N ++      +  D  L L + M+++  EP
Sbjct: 328 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEP 386

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           N +TY I+I M C  G    AY+ + EM E   L P      +++ +L +A +L++  ++
Sbjct: 387 NSSTYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEAYKI 445

Query: 521 VEKMVDRG 528
            E    RG
Sbjct: 446 FESASQRG 453



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 10/253 (3%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           +GKV +   A+  ++ MK + V+ TV T+  +V    +     EA   F   +  G   +
Sbjct: 611 SGKVHK---AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 667

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + +S +I    +  R  EA    + + K    P+V  + +L+    +A  I+EA   F+
Sbjct: 668 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 727

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            MK     PN YTYSI+I+ LCR  +  +A   + +M + G  PN +T+  ++    K  
Sbjct: 728 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 787

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
                  ++ + K  G   D  ++N LI+      +  +A +V      +GC  N     
Sbjct: 788 NITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRIN----- 842

Query: 397 MIFRCISKLGDVN 409
            I  CIS L  +N
Sbjct: 843 -IKSCISLLDALN 854



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 1/220 (0%)

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  EM  +G    +    +L    V+A R +  +     M+RL        Y  LI    
Sbjct: 131 VLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALA 190

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           +  + E A+++L  M   G       F  + R +++ G V  A  +  ++K    EP+ V
Sbjct: 191 EARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIV 250

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YN+ +  F  + + DM  K   E++   ++P+  +Y  +I + C  G    A +   +M
Sbjct: 251 LYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM 310

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             E+ + P +  Y  ++     AG+ +   +L+E++ +RG
Sbjct: 311 EAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 349



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 36/204 (17%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           LY  +I+  GKV + D A+  ++ M  + +   V T++ L+   V+A    EA+  F  M
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 729

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           +E  C P+   +SI+I+ LCR ++ ++A  F+ D  K    P+V+ YT ++ G  + GNI
Sbjct: 730 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 789

Query: 269 S-----------------------------------EAERVFREMKMAGIQPNVYTYSIV 293
           +                                   EA +VF E ++ G + N+ +   +
Sbjct: 790 TDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISL 849

Query: 294 IDALCRCGQITRAHDVFAEMLEVG 317
           +DAL +   + +A  V A + E+ 
Sbjct: 850 LDALNKSECLEQAAIVGAVLREIA 873


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 198/441 (44%), Gaps = 53/441 (12%)

Query: 142 PEFVHSPDLYHEMINLAG----------------KVRQFDLAWHFIDLMKSRNVEITVDT 185
           P+ V + DL  EM    G                K    + A   +D M    + ++V  
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIA 347

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
            + LV  Y +     +A+  FNRMEE G APDK+ FS+++   C+     +A  F+  +K
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407

Query: 246 D-KFEPDVIVYTNLVRG----------------------------------WCRAGNISE 270
             +  P  ++   +++G                                  +C+ G +  
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDA 467

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A    + M+  GI+PNV  Y+ ++ A CR   +  A  +F+EMLE G EPN+ T++ L+ 
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCN 389
              K    +    V NQM     EA+ + YN +I+  CK G+   A ++L ++++ K  +
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            + +++N I     K+GD + A   Y +M +    PN VT+  L+  F  S   D+ L++
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM+  E++ ++  Y  LI  +C       AY    E+  E  L P  SVY  ++   R
Sbjct: 648 THEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL-PELGLMPNVSVYNSLISGFR 706

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
             G++    +L +KMV+ G +
Sbjct: 707 NLGKMDAAIDLYKKMVNDGIS 727



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 190/423 (44%), Gaps = 37/423 (8%)

Query: 139 TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           + R  F  +P  ++ ++N   + ++ D A     LM  R V   V   + ++   VR+ L
Sbjct: 160 SKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNL 219

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTN 257
             EA   +N+M   G A D +   +++    R+R+  EA   F  +  +  EPD ++++ 
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSL 279

Query: 258 LVRGWCRAGNISEAERVFREMK-MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            V+  C+  ++  A  + REM+   G+  +  TY+ VI A  + G +  A  V  EM+  
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G   + I   +L+  + K +   K L ++N+M+  G   D + ++ +++  CK+ ++E A
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399

Query: 377 IK--------------VLNSMVRKGC----NPNAS------TF----------NMIFRCI 402
           I+              VL   + +GC    +P A+      +F          N IF   
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            K G V+ A      M+    EPN V YN +M      K+ D+   +  EM E  +EPN 
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY ILI  +       NA+  I +M      +    +Y  ++  L + GQ  K +E+++
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 523 KMV 525
            ++
Sbjct: 579 NLI 581



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 167/370 (45%), Gaps = 40/370 (10%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV   D A  F+ +M+ + +E  V  ++ ++  + R      A   F+ M E G  P+ 
Sbjct: 463 GKV---DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             +SI+I    + +    A    + +    FE + ++Y  ++ G C+ G  S+A+ + + 
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579

Query: 278 M-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           + K      +  +Y+ +ID   + G    A + + EM E G  PN +TF +L+    K++
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           R +  L++ ++MK +  + D   Y  LID  CK   ++ A  + + +   G  PN S +N
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699

Query: 397 MI---FRCISKL--------------------------------GDVNGAHRMYGKMKDL 421
            +   FR + K+                                G++N A  +Y ++ DL
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P+ + + +L+   +         K+ +EM++ +V PNV  Y  +I  +   G+ N A
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819

Query: 482 YKYIREMIEE 491
           ++   EM+E+
Sbjct: 820 FRLHDEMLEK 829



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 131/307 (42%), Gaps = 19/307 (6%)

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           +   I++S +    RAS     F S      P+V+V  NLV    R G            
Sbjct: 118 VLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMV-NNLVDSSKRFG------------ 164

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
               + P  + Y  +++A  R  ++  A D F  M++    P     NN++   V+++  
Sbjct: 165 --FELTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           ++  ++YN+M  +G   D +T   L+    ++ K E+A+K+   ++ +G  P+   F++ 
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280

Query: 399 FRCISKLGDVNGAHRMYGKMKD-LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
            +   K  D+  A  +  +M+  L    +  TY  ++  F    + +  +++  EM    
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +  +V     L+  YC       A      M EE+ L P   ++ ++++   +  +++K 
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRM-EEEGLAPDKVMFSVMVEWFCKNMEMEKA 399

Query: 518 EELVEKM 524
            E   +M
Sbjct: 400 IEFYMRM 406



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 6/159 (3%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V  ++ L+  +   G    A+  + +M   G + D   ++ +I  L +    + A   + 
Sbjct: 695 VSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYS 754

Query: 243 SLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            L D    PD I++  LV G  + G   +A ++  EMK   + PNV  YS VI    R G
Sbjct: 755 ELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            +  A  +  EMLE G   +   FN L+     + R EK
Sbjct: 815 NLNEAFRLHDEMLEKGIVHDDTVFNLLV-----SGRVEK 848



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/180 (18%), Positives = 77/180 (42%)

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           KR G E     +N+L++ + ++ +++ A+     MV +   P     N +   + +   +
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +Y KM  +    + VT  +LM+     +  +  +K+ + +     EP+   + + 
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C       A   +REM  +  +      Y  V+    + G +++   ++++MV  G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 2/377 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   K ++ +    F+  M+ + V   V T++ L+  Y R GL  EA    + M   G
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P    ++ +I+ LC+  +   A+   D  LK    PD   Y  L+   CR  N+ +AE
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R+F EM   G+ P++ ++S +I  L + G + +A   F +M   G  P+++ +  L+   
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +     + L+V ++M   GC  D +TYN +++  CK+  L +A ++   M  +G  P+ 
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  +     K G++N A  ++  M     +P+ VTYN L+  F      + V +L  +
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M    + PN  +Y ILI  YC MG  + A++   EM+ EK  +        +++   RAG
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV-EKGFEATIITCNTIVKGYCRAG 722

Query: 513 QLQKHEELVEKMVDRGF 529
              K +E +  M+ +G 
Sbjct: 723 NAVKADEFLSNMLLKGI 739



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 177/364 (48%), Gaps = 2/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M S+ V   + +FS L+    + G   +A+  F  M+  G APD + ++I+I 
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541

Query: 227 ILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR    SEA    D  L+     DV+ Y  ++ G C+   +SEA+ +F EM   G+ P
Sbjct: 542 GFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 601

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           + YT++ +I+   + G + +A  +F  M++   +P+ +T+N L+    K S  EKV +++
Sbjct: 602 DFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 661

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M       + I+Y  LI+ +C  G + +A ++ + MV KG      T N I +   + 
Sbjct: 662 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 721

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G+   A      M      P+ +TYN L+  F   ++ D    L  +ME + + P+V TY
Sbjct: 722 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 781

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            +++  +   G    A   + +MI E+ + P  S Y  ++        L++   + ++M+
Sbjct: 782 NVILNGFSRQGRMQEAELIMLKMI-ERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 840

Query: 526 DRGF 529
            RGF
Sbjct: 841 QRGF 844



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 231/492 (46%), Gaps = 36/492 (7%)

Query: 42  NPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLG-FSQ 100
           NPNSS   P L   ET       + +     ++PN S++ + S   +  + +L  G  + 
Sbjct: 138 NPNSSYGIPALQTLET------STTLNPSSVEDPNQSTSLSDSFLTEKVLLNLKQGKLNS 191

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTAR-PEFVHSPDLYHEMINLAG 159
           +        S V   +   C  R  + L Q   F + +T+  P F HS   +  MI++  
Sbjct: 192 LRNLLFRLDSVVVVDVLYKC--RENLQLGQ--RFIDSITSNCPNFKHSLQSFSAMIHI-- 245

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA-AEAVHAFNRMEEYG-CAPD 217
                        L++SR +    D  ++++R   ++G++  E V +   +  YG C  +
Sbjct: 246 -------------LVRSRRLP---DAQAVILRMVRKSGVSRVEIVESL--VLTYGNCGSN 287

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + F +++    + R+  E    F  LK K     +    +L+ G  + G +  A  +++
Sbjct: 288 PLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQ 347

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           E+  +G+Q NVYT +I+I+ALC+  +I       ++M E G  P+ +T+N L+  + +  
Sbjct: 348 EVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG 407

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
             E+  ++ + M   G +    TYN +I+  CK GK   A  VL+ M++ G +P+ +T+N
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           ++     +  ++  A R++ +M      P+ V+++ L+ + + +   D  LK  ++M+  
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P+   Y ILI  +C  G  + A K   EM+E+ C       Y  +L  L +   L +
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC-XLDVVTYNTILNGLCKEKMLSE 586

Query: 517 HEELVEKMVDRG 528
            +EL  +M +RG
Sbjct: 587 ADELFTEMTERG 598



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 38/352 (10%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  +I L  K    D A  +   MK+  +      ++IL+  + R G+ +EA+  
Sbjct: 496 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 555

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------------ 247
            + M E GC  D + ++ +++ LC+++  SEA   F  + ++                  
Sbjct: 556 RDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXK 615

Query: 248 ------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                              +PDV+ Y  L+ G+C+   + +   ++ +M    I PN  +
Sbjct: 616 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 675

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y I+I+  C  G ++ A  ++ EM+E G E   IT N +++ + +A    K  +  + M 
Sbjct: 676 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 735

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G   D ITYN LI+   K+  ++ A  ++N M   G  P+  T+N+I    S+ G + 
Sbjct: 736 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 795

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
            A  +  KM +    P+  TY  L+    T  +     ++  EM +    P+
Sbjct: 796 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 185/385 (48%), Gaps = 5/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K R  D A   +  M  + VE    T++ ++  Y  +G   E+   
Sbjct: 265 PDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKM 324

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
           F +M   G  PD + FS  +S LC+  R+ +A+  F  +  K   PD++ Y+ L+ G+  
Sbjct: 325 FRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYAT 384

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G  ++   +F  M   GI  N +  +I+I A  + G +  A  VF EM   G  PN +T
Sbjct: 385 EGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    +  R    ++ ++QM  +G E +T  Y+ LI   C  G L  A + ++ M+
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504

Query: 385 RKGCN-PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            KG + PN   F+ I   +   G V  A  ++  +  +   P  VT+N L+  +      
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 564

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +    +   M    +EP+V T   L++ YC  G  ++     REM+ +K +KP +  Y +
Sbjct: 565 EKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKK-VKPTTVTYNI 623

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           VL  L RAG+    +++  +M+D G
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSG 648



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 188/383 (49%), Gaps = 5/383 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-NRM 209
           Y  +++   + R+ DL   F+  +    ++      +  ++    A    EAV    +RM
Sbjct: 127 YGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRM 186

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK---DKFEPDVIVYTNLVRGWCRAG 266
            E  C PD I+++ VI  LC   R+ EA      +     +  PDV+ +  ++ G+ + G
Sbjct: 187 SELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQG 246

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            +S+A  +F EM   G+ P+V TY+ ++DALC+   + +A  V  +M++ G EP+ +T+N
Sbjct: 247 EVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYN 306

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            ++  +  +   ++  +++ +M   G   DT+T++  +   CK G+ +DA ++   M  K
Sbjct: 307 AIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTK 366

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  P+  +++++    +  G     + ++  M D     N    NIL+   A     D  
Sbjct: 367 GHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEA 426

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           + +  EM+   V PNV TY  LI+ +C MG   +A +   +MI    ++P ++VY  ++ 
Sbjct: 427 MLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG-IEPNTAVYHSLIH 485

Query: 507 QLRRAGQLQKHEELVEKMVDRGF 529
                G L K +E + +M+ +G 
Sbjct: 486 GFCMHGDLVKAKEFISEMMSKGL 508



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 191/422 (45%), Gaps = 43/422 (10%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVR 191
            F ++T +    H PD+    I L G   +   A   +    M  + +       +IL+ 
Sbjct: 359 IFQYMTTKG---HMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILIS 415

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEP 250
            + + G+  EA+  F  M+  G  P+ + +S +IS  CR  R ++A + F   +    EP
Sbjct: 416 AHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEP 475

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRAHDV 309
           +  VY +L+ G+C  G++ +A+    EM   G+ +PN+  +S +I +LC  G++  A DV
Sbjct: 476 NTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDV 535

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  ++ +G  P  +TFN+L+  +    + EK   V + M  +G E D +T N L+  +CK
Sbjct: 536 FNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCK 595

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            GK++D + +   M+ K   P   T+N++   + + G  + A +M+ +M D     +  T
Sbjct: 596 SGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDT 655

Query: 430 YNILMQMFATSKSTDMVL--------------------------KLKKEMEENEV----- 458
           Y IL++    +  TD  +                          K+++  E N++     
Sbjct: 656 YKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIS 715

Query: 459 ----EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
                PNV+TY ++I      G    A      M +  C  P S +   +++ L + G +
Sbjct: 716 TSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGC-APSSRLLNDIIRMLLQKGDI 774

Query: 515 QK 516
            K
Sbjct: 775 VK 776



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 159/340 (46%), Gaps = 6/340 (1%)

Query: 150 LYHEMINLAGKVRQFDL--AWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHAF 206
           +YH +I+  G     DL  A  FI  M S+ +    +  FS ++      G   +A   F
Sbjct: 479 VYHSLIH--GFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVF 536

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
           N +   G  P  + F+ +I   C   +  +A    D++     EPDV+    LV G+C++
Sbjct: 537 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKS 596

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G I +   +FREM    ++P   TY+IV+D L R G+ + A  +F EM++ G   +  T+
Sbjct: 597 GKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTY 656

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             L++   +   T++ + +++++  + C+ D    N +I+   K  + E+A  +  ++  
Sbjct: 657 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIST 716

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G  PN ST+ ++ R + K G V  A  M+  M+   C P++   N +++M         
Sbjct: 717 SGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVK 776

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
                 +++   +    +T  +L++++   G      K++
Sbjct: 777 AGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 816



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 5/260 (1%)

Query: 273 RVFREMKMAGIQP-NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           R+ RE     + P  V TY I++D  CR  +        A +L  G +  +I     ++ 
Sbjct: 109 RICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKC 168

Query: 332 HVKASRTEKVLQV-YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--C 388
              A RT++ + V  ++M  L C  D I+YN +I   C D + ++A+ ++  M ++G  C
Sbjct: 169 LCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 228

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +P+  +FN +     K G+V+ A  ++ +M      P+  TYN ++     +++ D    
Sbjct: 229 SPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEF 288

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + ++M +  VEP+  TY  +I  Y   GHW  + K  R+M   K L P +  +   +  L
Sbjct: 289 VLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKM-TSKGLIPDTVTFSSFMSSL 347

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            + G+ +  EE+ + M  +G
Sbjct: 348 CKHGRSKDAEEIFQYMTTKG 367


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 183/384 (47%), Gaps = 3/384 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++    K R+ D A    D M           F  L+    +AG   +A   F +M 
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           ++GC P+   +++++  LC   +  +A + F  +K     PDV+ Y  L+   C+A  + 
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E  ++F  M+ AG  PNV T+S +I  LCR G++ +A +VF  MLE GC+PN  T+  L+
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 297

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGC 388
               +A +  +  +++ +M +     D + YN LI  +CK G +++A K+   M    G 
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 357

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   TFN +     KLG +  A+ +  +M       ++ TY IL+   + +   D  L+
Sbjct: 358 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALE 417

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + K+M E +   +  +    +   C  G+ + AY  + E   +    P    + ++ + L
Sbjct: 418 VYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA-VFEATRKSGAVPNPETFRILSESL 476

Query: 509 RRAGQLQKHEELVEKMVDRGFTAR 532
            + G+++  ++L+E    R  TA+
Sbjct: 477 IKLGRVEDAQKLMEPAKARDITAQ 500



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 178/394 (45%), Gaps = 36/394 (9%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+ +N+   V T+S +++  V+     E+      M   GC PD  AF+ V+    R   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+  +  + +  ++PD + Y  L+ G  + G + E+ ++  EM M G  P++  YS 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 293 VIDAL-----------------------------------CRCGQITRAHDVFAEMLEVG 317
           ++ AL                                   C+ G++  A + F +M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
           C+PN   +N L+     + + E+   ++ +MK   C  D +TYN L+D  CK  ++E+  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K+  +M   G  PN  TF+ +   + + G++  A  ++G M +  C+PN  TY  L+   
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             ++      +L ++M +  + P+   Y  LI  YC  G  + A K  REM     L+P 
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
              +  ++    + G+L +  ELV +M  +G  A
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAA 394



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 147/272 (54%), Gaps = 4/272 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +++   K R+ +      + M++      V TFS L+    R G   +A+ 
Sbjct: 217 SPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 276

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F  M E GC P+K  ++ +IS LCR  +  +A+  F+ +      PD + Y +L+ G+C
Sbjct: 277 VFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC 336

Query: 264 RAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           + G++ EAE+++REM   AG+QP + T++ +ID  C+ G++ RA+++ AEM   G   +S
Sbjct: 337 KRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADS 396

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+  L+    +A++ ++ L+VY QM+      D ++    +   CK G ++ A  V  +
Sbjct: 397 CTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEA 456

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
             + G  PN  TF ++   + KLG V  A ++
Sbjct: 457 TRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 189/386 (48%), Gaps = 4/386 (1%)

Query: 147  SPDLYH--EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            S DLY    +I+   +  +F LA   +  M     + ++ T   L+  + +     EAV 
Sbjct: 647  SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706

Query: 205  AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
              + M E G  P+ + ++ VI+ LC+ R  + A   F  ++ K    D + Y  L+ G C
Sbjct: 707  LVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLC 766

Query: 264  RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             +G  ++A R+ R+M    I PNV  ++ +ID   + G +  A +++ EM+     PN +
Sbjct: 767  NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNIL 826

Query: 324  TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            T+N+L+       R      +++ M   GC  D +TYN LI   CK  ++ED +K+   M
Sbjct: 827  TYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 886

Query: 384  VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              +G   +A T+N +     + G +N A +++ +M D    P+ VTYNIL+     +   
Sbjct: 887  THQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKI 946

Query: 444  DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
            +  L + +++++N+++ ++ TY I+I   C       A+   R +   K +K  +  Y  
Sbjct: 947  EKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL-TRKGVKLDAIAYIT 1005

Query: 504  VLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  L R G  ++ ++L  +M + GF
Sbjct: 1006 MISGLCRNGLRREADKLCTRMKEDGF 1031



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 155/327 (47%), Gaps = 2/327 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVI 225
           A+  +  M     E  V  ++ L+    + G    A+   N ME+ G  A D + ++ ++
Sbjct: 154 AFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLL 213

Query: 226 SILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           + LC      +A     D  K +  PDV  +T L+  + + GN+ EA+ ++++M  + I 
Sbjct: 214 TGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIG 273

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PN  TY+ +I+ LC  G++  A   F  M   GC PN +T+N L+    K+ R E  +++
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKL 333

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + +M R G   DT TYN LI  +C+ GKL  A  + + MV  G  P+  T  ++   +  
Sbjct: 334 FQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCV 393

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G++  A   +  M+  +     V YNI++     +   +   +L   +    V+P+  T
Sbjct: 394 NGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDART 453

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEE 491
           Y I+I   C  G    A +  R M E+
Sbjct: 454 YTIMILGLCKNGPRREADELFRRMKED 480



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 179/394 (45%), Gaps = 5/394 (1%)

Query: 144 FVHSPDLYH--EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           F  S DLY    +I+   +  +  LA   +  M     + ++ TF  L+  +       +
Sbjct: 94  FGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHD 153

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLV 259
           A      M + G  P+ + ++ +I  LC+    + A    + +  K +   D++ Y  L+
Sbjct: 154 AFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLL 213

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C +G   +A R+ R+M    I P+V+T++ +IDA  + G +  A +++ +ML+    
Sbjct: 214 TGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIG 273

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN++T+N+L+       R     + ++ M   GC  + +TYN LI+  CK  ++ED +K+
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKL 333

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              M R+G   +  T+N +     ++G +  A  ++  M      P+ +T+ IL+     
Sbjct: 334 FQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCV 393

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +      +    +M   E    +  Y I+I   C       A++    +  E  +KP + 
Sbjct: 394 NGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG-VKPDAR 452

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            Y +++  L + G  ++ +EL  +M + G   + 
Sbjct: 453 TYTIMILGLCKNGPRREADELFRRMKEDGIICQA 486



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 153/315 (48%), Gaps = 15/315 (4%)

Query: 170 FIDLMKSRNVEITVDTFSIL-----VRRYVRAGLAAEAVHAFNR-MEEYGCAPDKIAFSI 223
           F+++++S+ +   VD   +L     +RRY       E V  F++ ME +G + D  +F+I
Sbjct: 53  FLEMVQSQPLPSVVDFTRLLTAIANLRRY-------ETVIYFSQQMELFGISHDLYSFTI 105

Query: 224 VISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I   CR  R S A S     +K  ++P ++ + +L+ G+C    I +A  +   M  +G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKV 341
            +PNV  Y+ +ID LC+ G +  A ++  EM + G    + +T+N L+     +    + 
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            ++   M +     D  T+  LID   K G L++A ++   M++    PN  T+N +   
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +   G +  A + +  M    C PN VTYN L+  F  S+  +  +KL + M    +  +
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 462 VNTYRILITMYCGMG 476
             TY  LI  YC +G
Sbjct: 346 TFTYNTLIHGYCQVG 360



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 144/296 (48%), Gaps = 8/296 (2%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF---REMKMAGIQPNVYTYSIVIDA 296
           F + ++ +  P V+ +T L+       N+   E V    ++M++ GI  ++Y+++I+I  
Sbjct: 53  FLEMVQSQPLPSVVDFTRLLTA---IANLRRYETVIYFSQQMELFGISHDLYSFTILIHC 109

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            CRC +++ A  +  +M+++G +P+ +TF +L+      +R      +   M + G E +
Sbjct: 110 FCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPN 169

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMY 415
            + YN LIDC CK+G +  A+++LN M +KG    +  T+N +   +   G+   A R+ 
Sbjct: 170 VVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARIL 229

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             M   +  P+  T+  L+  F    + D   +L K+M ++ + PN  TY  LI   C  
Sbjct: 230 RDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMH 289

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           G   +A K    M  + C  P    Y  ++    ++ +++   +L ++M   G   
Sbjct: 290 GRLYHAKKTFDLMASKGCF-PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG 344



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 152/298 (51%), Gaps = 3/298 (1%)

Query: 151  YHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            Y+ +I+ L    R  D A    D++K R ++  V  F+ L+  +V+ G   EA + +  M
Sbjct: 758  YNTLISGLCNSGRWTDAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816

Query: 210  EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
                  P+ + ++ +I+  C + R  +A+  FD +  K   PDV+ Y  L+ G+C++  +
Sbjct: 817  IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 876

Query: 269  SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             +  ++F EM   G+  + +TY+ +I   C+ G++  A  VF  M++ G  P+ +T+N L
Sbjct: 877  EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936

Query: 329  MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
            +       + EK L +   +++   + D ITYN +I   C++ K+++A  +  S+ RKG 
Sbjct: 937  LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996

Query: 389  NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
              +A  +  +   + + G    A ++  +MK+    P+   Y+  ++   TS S +++
Sbjct: 997  KLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYTSLSAELI 1054



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 140/292 (47%), Gaps = 1/292 (0%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + L+ +  P ++ +T ++    +         +F +M+  GI  ++Y+++I+I   CR
Sbjct: 603 FCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCR 662

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C + + A  +  +M+++G +P+ +T  +L+    + +R ++ + + + M  LG E + + 
Sbjct: 663 CSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVI 722

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN +I+  CK+  L +A+++   M +KG   +A T+N +   +   G    A R+   M 
Sbjct: 723 YNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV 782

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
             K +PN + +  L+  F    +      L KEM    V PN+ TY  LI  +C  G   
Sbjct: 783 KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLG 842

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           +A      M+ + C  P    Y  ++    ++ +++   +L  +M  +G   
Sbjct: 843 DAKHMFDLMVSKGCF-PDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 175/403 (43%), Gaps = 28/403 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MI+   K  + + AW     +    V+    T++I++    + G   EA   F RM+
Sbjct: 419 YNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK 478

Query: 211 EYG--CAPDKIAF---------SIVISILCRKRRASEAQS----FFDSLKDKFEPDV--- 252
           E G  C  +             S+   I+C KRR S  +S    ++ S    +   V   
Sbjct: 479 EDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLI 538

Query: 253 -IVYTNLVRGWCRA-------GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            I  ++ V+G+ R        GN  E+ R F          + + Y   + +   C +  
Sbjct: 539 PIASSSSVKGFVRRHLLLLERGNNPES-RSFSGASHHHHHHHHHHYRERLRSELHCIKFD 597

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +F EML+    P+ + F  ++    K ++ + V+ ++++M+ LG   D  ++  LI
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
            C C+  +   A+ +L  M++ G  P+  T   +     +      A  +   M +L  E
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN V YN ++     ++  +  L++   ME+  +  +  TY  LI+  C  G W +A + 
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +R+M++ K + P    +  ++    + G L + + L ++M+ R
Sbjct: 778 LRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRR 819



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 2/221 (0%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A D+F EM++    P+ + F  L+       R E V+    QM+  G   D  ++  LI 
Sbjct: 49  ALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           C C+  +L  A+ +L  M++ G +P+  TF  +         ++ A  +   M     EP
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEP 168

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEME-ENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           N V YN L+     +   ++ L+L  EME +  +  ++ TY  L+T  C  G W  A + 
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI 228

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           +R+M + + + P    +  ++    + G L + +EL ++M+
Sbjct: 229 LRDMTKRR-INPDVFTFTALIDAFVKQGNLDEAQELYKQML 268



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 120/259 (46%), Gaps = 1/259 (0%)

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F EM  +   P++  ++ V+ A+ +  +      +F +M  +G   +  +F  L+
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               + SR    L +  +M +LG +   +T   L++  C+  + ++A+ +++SM   G  
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN   +N +   + K  D+N A  ++  M+      + VTYN L+     S       +L
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            ++M + +++PNV  +  LI  +   G+   A    +EMI  + + P    Y  ++    
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMI-RRSVHPNILTYNSLINGFC 836

Query: 510 RAGQLQKHEELVEKMVDRG 528
             G+L   + + + MV +G
Sbjct: 837 IQGRLGDAKHMFDLMVSKG 855



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 1/162 (0%)

Query: 185  TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            T++ L+  Y +AG    A   FNRM + G  PD + ++I++  LC   +  +A    + L
Sbjct: 897  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL 956

Query: 245  -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K++ + D+I Y  +++G CR   + EA  +FR +   G++ +   Y  +I  LCR G  
Sbjct: 957  QKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLR 1016

Query: 304  TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
              A  +   M E G  P+   ++  +R H  +   E +  V+
Sbjct: 1017 READKLCTRMKEDGFMPSERIYDETLRDHYTSLSAELIKAVH 1058



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 12/205 (5%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           DLM S+     V T++ L+  + ++    + +  F RM   G   D   ++ +I   C+ 
Sbjct: 300 DLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQV 359

Query: 232 RRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
            +   A+  F  +      PD+I +  L+ G C  G I  A   F +M+       +  Y
Sbjct: 360 GKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAY 419

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I+I  LC+  ++  A ++F  +   G +P++ T+  ++    K     +  +++ +MK 
Sbjct: 420 NIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479

Query: 351 LGCEADTITYNFLIDCHCKDGKLED 375
            G           I C  +DG L +
Sbjct: 480 DG-----------IICQAEDGHLGE 493


>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
 gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
          Length = 439

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 220/457 (48%), Gaps = 47/457 (10%)

Query: 44  NSSPDTPFLSPEETLI------SEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLG 97
           NSS  T  L+P +TL+      +  FH      H + PNP   S+P LN D         
Sbjct: 2   NSSILTRRLNPAKTLLLPYSTNTPTFH-----FHSRTPNPPQ-SDP-LNLD--------- 45

Query: 98  FSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINL 157
                       STV   +  SC   +     + L FFNWV    +F H+ + Y+ MI++
Sbjct: 46  -----------SSTVFQTL--SC---YNNDWKRALDFFNWVETESQFQHTTETYNRMIDI 89

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEI-TVDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCA 215
            GK  +FDL+W  I  M++         TF +L  RY+ A L  EAV  + +R++E+G  
Sbjct: 90  LGKFFEFDLSWDLIQRMRNNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYEDRLKEFGLK 149

Query: 216 PDKIAFSIVISILCRKRRASEAQSF-FDSLKDKFEPDVI--VYTNLVRGWCRAGNISEAE 272
            D+ ++ I++  LC  +   EA    F +  +      I  +Y  ++RGW + G   +  
Sbjct: 150 -DETSYCILVDALCEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKMGWWGKCR 208

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
             + EM    +  ++++YSI +D LC+ G+  +A  ++ EM   G + + + +N ++   
Sbjct: 209 EFWEEMDRKEVCKDLHSYSIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAYNTVINAI 268

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
             +   + VL+VY +M+ LGC+ + +T N +I   C++G++++A K+L+ M +    P+ 
Sbjct: 269 GLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMPQSYIAPDV 328

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T++  FRC+ K  ++     ++ +M +    P   TY +LM+ F        V  + K+
Sbjct: 329 FTYHCFFRCLEKPKEILC---LFDQMIENGVCPRMDTYVMLMRKFGRWGFLRPVFLVWKK 385

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           ME+    P+   Y  LI      G  + A KY  EM+
Sbjct: 386 MEKLGCSPDEFAYNALIDALIQKGMVDMARKYDEEMM 422



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 33/235 (14%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           +++++R + + G   +    +  M+      D  ++SI + ILC+  +  +A   +  +K
Sbjct: 191 YNMILRGWFKMGWWGKCREFWEEMDRKEVCKDLHSYSIYMDILCKSGKPWKAVKLYKEMK 250

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            K  + DV+ Y  ++     +  +    RV+REM+  G QPNV T + VI  LC  G+I 
Sbjct: 251 SKGIKLDVVAYNTVINAIGLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGRIK 310

Query: 305 RAH-------------DVFA-------------------EMLEVGCEPNSITFNNLMRVH 332
            A+             DVF                    +M+E G  P   T+  LMR  
Sbjct: 311 EAYKMLDEMPQSYIAPDVFTYHCFFRCLEKPKEILCLFDQMIENGVCPRMDTYVMLMRKF 370

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
            +      V  V+ +M++LGC  D   YN LID   + G ++ A K    M+ KG
Sbjct: 371 GRWGFLRPVFLVWKKMEKLGCSPDEFAYNALIDALIQKGMVDMARKYDEEMMAKG 425


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 196/386 (50%), Gaps = 5/386 (1%)

Query: 146 HSP--DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P  + ++ ++ L  +   FD AW   + +KS+ V +   +F I+++    AG   +  
Sbjct: 120 HVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGF 178

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
                +EE+G +P+ + ++ +I   C+      A++ F  + +    P+   Y+ L+ G+
Sbjct: 179 RLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGF 238

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G   E  +++  MK +GI PN Y Y+ +I   C  G + +A  VFAEM E G     
Sbjct: 239 FKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGV 298

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+N L+    +  +  + +++ +++ ++G   + +TYN LI+  C  GK++ A+++ N 
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQ 358

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +   G +P   T+N +    SK+ ++ GA  +  +M++    P+ VTY IL+  FA    
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNY 418

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           T+   ++   ME++ + P+V TY +LI   C  G+   A K  + + E   L+P S +Y 
Sbjct: 419 TEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH-LQPNSVIYN 477

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
            ++    + G   +   L+ +MV  G
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVHSG 503



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 1/345 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           +  +V  YV +    +A+   + M   G  P    F+ ++ +L R     +A   F+ LK
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
            K   D   +  +++G C AG   +  R+   ++  G+ PNV  Y+ +ID  C+ G +  
Sbjct: 152 SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVML 211

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A ++F +M  +G  PN  T++ LM    K     +  Q+Y  MKR G   +   YN LI 
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            +C  G ++ A KV   M  KG      T+N++   + +      A ++  K+  +   P
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N VTYNIL+  F      D  ++L  +++ + + P + TY  LI  Y  + +   A   +
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +EM EE+C+ P    Y +++    R    +K  E+   M   G  
Sbjct: 392 KEM-EERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLV 435



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 174/373 (46%), Gaps = 4/373 (1%)

Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F  +    EF  SP+  +Y  +I+   K     LA +    M    +     T+S+L+  
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNG 237

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
           + + GL  E    +  M+  G  P+  A++ +IS  C      +A   F  +++K     
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACG 297

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           V+ Y  L+ G CR     EA ++  ++   G+ PN+ TY+I+I+  C  G++  A  +F 
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           ++   G  P  +T+N L+  + K       L +  +M+        +TY  LID   +  
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
             E A ++ + M + G  P+  T++++   +   G++  A +++  + ++  +PN+V YN
Sbjct: 418 YTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            ++  +    S+   L+L  EM  + + PNV ++   I + C    W  A   + +MI  
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINS 537

Query: 492 KCLKPGSSVYEMV 504
             LKP  S+Y+MV
Sbjct: 538 G-LKPSVSLYKMV 549



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 36/272 (13%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A+     M+ + +   V T++IL+    R     EAV   +++ + G +P+ + ++I+
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMK---- 279
           I+  C   +   A   F+ LK     P ++ Y  L+ G+ +  N++ A  + +EM+    
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399

Query: 280 -------------------------------MAGIQPNVYTYSIVIDALCRCGQITRAHD 308
                                           +G+ P+VYTYS++I  LC  G +  A  
Sbjct: 400 APSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASK 459

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F  + E+  +PNS+ +N ++  + K   + + L++ N+M   G   +  ++   I   C
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLC 519

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           +D K ++A  +L  M+  G  P+ S + M+ +
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 189/412 (45%), Gaps = 34/412 (8%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   +  + + A   ++ M     E  V TF+ ++    +AG   EA    +RM
Sbjct: 237 IYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRM 296

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSF------------------------FDSLK 245
                  D +    ++  LCR  +  EA++                         F+  K
Sbjct: 297 LLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAK 356

Query: 246 D---------KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           D          FEPD   +  ++ G C+ G +  A     EM   G +PNV TY+I+ID 
Sbjct: 357 DLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDG 416

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            C+ G    A  V   M   G   N++ +N L+    K  + +  LQ+Y +M   GC+ D
Sbjct: 417 FCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD 476

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             T+N LI   CK+ K+E+A+ +   M+ +G   N  T+N +     +L  +  A ++ G
Sbjct: 477 IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVG 536

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M+   C  + +TYN L++    + +T+  L L ++M   E+ P++N+  ILI  +C  G
Sbjct: 537 EMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             N+A +++R+MI ++ L P    Y  ++  L + G+ Q+   L   +  +G
Sbjct: 597 KVNDALQFLRDMI-QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 37/333 (11%)

Query: 186 FSILVRRYVRAGLAAEAVHA-FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           ++ L+  YV +G   EA    +  M   G  PD   F+I+I  LC+K     A  F D +
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            K  FEP+VI YT L+ G+C+ G+  EA +V   M   G+  N   Y+ +I ALC+ G+I
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY------------------ 345
             A  ++ EM   GC+P+  TFN+L+    K  + E+ L +Y                  
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518

Query: 346 -----------------NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                             +M+  GC  D ITYN LI   CK G  E  + ++  M  +  
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+ ++ N++     + G VN A +    M      P+ VTYN L+            L 
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           L   ++   + P+  TY  LI+ YC  G +N+A
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 190/425 (44%), Gaps = 14/425 (3%)

Query: 107 ISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           I+PS +  ++E    V   + L      F     +  ++HS  +Y+ +I+  G V +F +
Sbjct: 59  ITPSQLCKLLELPLDVPTSMDL------FEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKM 112

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC-APDKIAFSIVI 225
               +  MK          F +++R Y +AGL  +A      M    C  P   ++++V+
Sbjct: 113 IDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVL 172

Query: 226 SILCRKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            IL        A + F+D L     P V  +  +++ +C    +  A  + R+M   G  
Sbjct: 173 EILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCV 232

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PN   Y ++I AL    ++  A  +  EM  +GCEP+  TFN+++    KA R  +  ++
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +++M      AD +   +L+   C+ GK+++A     +M+ K  NPN   +N +      
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVV 348

Query: 405 LGDVNGAHR-MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
            G    A   +Y  M     EP+  T+NI++            L+   EM +   EPNV 
Sbjct: 349 SGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVI 408

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY ILI  +C  GH+  A K +  M   K L   +  Y  ++  L + G++Q   ++  +
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSM-SAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE 467

Query: 524 MVDRG 528
           M  +G
Sbjct: 468 MSSKG 472



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 159/328 (48%), Gaps = 3/328 (0%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD +   I + G  ++  L  A  F+D M  +  E  V T++IL+  + + G   EA   
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N M   G + + + ++ +I  LC+  +  +A   +  +  K  +PD+  + +L+ G C+
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              + EA  ++R+M + G+  N  TY+ +I A  R   I +A  +  EM   GC  ++IT
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++   K   TEK L +  QM          + N LI+  C+ GK+ DA++ L  M+
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           ++G  P+  T+N +   + K+G    A  ++  ++     P+ VTYN L+  +      +
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMY 472
              +L  +   N   PN  T+ ILI  +
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYF 697



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 37/212 (17%)

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
            Y  LID     G+ +   K+L  M  +GC    S F +I R   K G    A R+   M
Sbjct: 96  VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155

Query: 419 KDLKC-EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
             + C EP   +YN+++++        +   +  +M    + P V T+ +++  +C +  
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNE 215

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEM---------------------------------- 503
            ++A   +R+M +  C+ P S +Y+M                                  
Sbjct: 216 VDSACSLLRDMTKHGCV-PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFN 274

Query: 504 -VLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            V+  L +AG++ +  +L ++M+ R FTA  L
Sbjct: 275 DVIHGLCKAGRIHEAAKLHDRMLLRDFTADAL 306


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 184/363 (50%), Gaps = 2/363 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   +  +   A+  +  +     E    TF+ L++     G  +EAV   +RM E G
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD + ++ +++ +CR    S A      ++++  + DV  Y+ ++   CR G I  A 
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F+EM+  GI+ +V TY+ ++  LC+ G+      +  +M+     PN ITFN L+ V 
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           VK  + ++  ++Y +M   G   + ITYN L+D +C   +L +A  +L+ MVR  C+P+ 
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  + +    +  V+   +++  +       N VTY+IL+Q F  S    +  +L +E
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  + V P+V TY IL+   C  G    A +   ++ + K +  G  +Y  +++ + + G
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTIIEGMCKGG 477

Query: 513 QLQ 515
           +++
Sbjct: 478 KVE 480



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 185/367 (50%), Gaps = 2/367 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
            + +QF+L   F   ++   +   + T +I++  + R      A     ++ + G  PD 
Sbjct: 89  ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 148

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             F+ +I  L  + + SEA    D + ++  +PDV+ Y ++V G CR+G+ S A  + R+
Sbjct: 149 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 208

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   ++ +V+TYS +ID+LCR G I  A  +F EM   G + + +T+N+L+R   KA +
Sbjct: 209 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 268

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
                 +   M       + IT+N L+D   K+GKL++A ++   M+ +G +PN  T+N 
Sbjct: 269 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 328

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +         ++ A+ M   M   KC P+ VT+  L++ +   K  D  +K+ + + +  
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 388

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +  N  TY IL+  +C  G    A +  +EM+    L P    Y ++L  L   G+L+K 
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKA 447

Query: 518 EELVEKM 524
            E+ E +
Sbjct: 448 LEIFEDL 454



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 195/411 (47%), Gaps = 40/411 (9%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L GKV +   A   +D M     +  V T++ +V    R+G  + A+    +MEE     
Sbjct: 160 LEGKVSE---AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 216

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D   +S +I  LCR      A S F  ++ K  +  V+ Y +LVRG C+AG  ++   + 
Sbjct: 217 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 276

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           ++M    I PNV T+++++D   + G++  A++++ EM+  G  PN IT+N LM  +   
Sbjct: 277 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 336

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
           +R  +   + + M R  C  D +T+  LI  +C   +++D +KV  ++ ++G   NA T+
Sbjct: 337 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 396

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           +++ +   + G +  A  ++ +M      P+ +TY IL+     +   +  L++ +++++
Sbjct: 397 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456

Query: 456 NE-----------------------------------VEPNVNTYRILITMYCGMGHWNN 480
           ++                                   V+PNV TY ++I+  C  G  + 
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           A   +R+M EE    P    Y  +++   R G L    +L+E+M   GF+A
Sbjct: 517 ANILLRKM-EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 566



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 178/357 (49%), Gaps = 10/357 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++    K  +++     +  M SR +   V TF++L+  +V+ G   EA   +  M 
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P+ I ++ ++   C + R SEA +  D + ++K  PD++ +T+L++G+C    + 
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +  +VFR +   G+  N  TYSI++   C+ G+I  A ++F EM+  G  P+ +T+  L+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + EK L+++  +++   +   + Y  +I+  CK GK+EDA  +  S+  KG  
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+ ++   + K G ++ A+ +  KM++    PN  TYN L++            KL
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 555

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +EM+      + ++ +++I M             ++ +    CL  GS   + +L+
Sbjct: 556 IEEMKSCGFSADASSIKMVIDML---------LSAMKRLTLRYCLSKGSKSRQDLLE 603



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 148/358 (41%), Gaps = 69/358 (19%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + ++ +  P ++ ++       R    +      +++++ GI  N+YT +I+I+  CR
Sbjct: 66  FQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCR 125

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C +   A+ V  +++++G EP++ TFN L++      +  + + + ++M   GC+ D +T
Sbjct: 126 CCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVT 185

Query: 360 YN-----------------------------------FLIDCHCKDGKLEDAIKVLNSMV 384
           YN                                    +ID  C+DG ++ AI +   M 
Sbjct: 186 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 245

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG   +  T+N + R + K G  N    +   M   +  PN +T+N+L+ +F       
Sbjct: 246 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 305

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC----------- 493
              +L KEM    + PN+ TY  L+  YC     + A   +  M+  KC           
Sbjct: 306 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365

Query: 494 -----------------------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                                  L   +  Y +++Q   ++G+++  EEL ++MV  G
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITFNNL 328
           +A  +F+EM  +   P++  +S    A+ R  Q     D F + LE+ G   N  T N +
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNIM 119

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +  +T     V  ++ +LG E DT T+N LI     +GK+ +A+ +++ MV  GC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N I   I + GD + A  +  KM++   + +  TY+ ++         D  + 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L KEME   ++ +V TY  L+   C  G WN+    +++M+  + + P    + ++L   
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVF 298

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            + G+LQ+  EL ++M+ RG +
Sbjct: 299 VKEGKLQEANELYKEMITRGIS 320



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 38/198 (19%)

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG------------DVNG-AHRMY- 415
           D K +DAI +   M+R    P+   F+  F  I++              ++NG AH +Y 
Sbjct: 56  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 115

Query: 416 ---------------------GKMKDLKCEPNTVTYNILMQ-MFATSKSTDMVLKLKKEM 453
                                GK+  L  EP+T T+N L++ +F   K ++ V+ L   M
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV-LVDRM 174

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            EN  +P+V TY  ++   C  G  + A   +R+M EE+ +K     Y  ++  L R G 
Sbjct: 175 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGC 233

Query: 514 LQKHEELVEKMVDRGFTA 531
           +     L ++M  +G  +
Sbjct: 234 IDAAISLFKEMETKGIKS 251



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 35/76 (46%)

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R   +  AE + +EM   GI PN  TYS +ID  C+  ++  A+ +   M+  G      
Sbjct: 711 RKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRY 770

Query: 324 TFNNLMRVHVKASRTE 339
               LMR   K S TE
Sbjct: 771 LLAGLMRKKRKGSETE 786



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +++ +M + G   +TITY+ LID  CK+ +L++A ++L+ MV KG +        + R  
Sbjct: 720 ELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMRKK 779

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            K  +  G   +     DL C   + + N     F +  S +   +LKK  +E E   +V
Sbjct: 780 RKGSETEGWENLP---DDLSCSTASRSSN-----FRSHFSLEGYARLKKRCKETEAVESV 831

Query: 463 NTYR 466
            +++
Sbjct: 832 GSFK 835


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 199/413 (48%), Gaps = 11/413 (2%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
           VR  +P  Q L +FN +  R   V   + ++ ++ L  K   F+ AW   +  K  NV++
Sbjct: 106 VRSQLPE-QALFYFNQMIGRG-LVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG-NVKL 162

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
            V +F I+++     G   +      +MEE G +P+ + ++ +I   C+       +  F
Sbjct: 163 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 222

Query: 242 DSLKDKFEPDVI----VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             +    E DV+     YT L+ G+ + G   +   ++ +MK+ GI PNVYTY+ +I   
Sbjct: 223 YKMG---ELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 279

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C  G++  A ++F EM E G   N +T+N L+    +  R  +  ++  +MKR G   + 
Sbjct: 280 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 339

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           I+YN LID +C  G L+ A  + N M   G +P+ +T+N++    S+  +  G   M  +
Sbjct: 340 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 399

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M+     P+ VTY ILM     S + +   ++   ME+  +  ++  Y +LI   C +G 
Sbjct: 400 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 459

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              A K  + + +E  LKP   +Y  ++    + G   +   L+++M + G  
Sbjct: 460 MKEASKLFKSL-DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMV 511



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 164/321 (51%), Gaps = 2/321 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L+  + + GL  + +  + +M+  G  P+   ++ +I   C   + + A   FD +
Sbjct: 236 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 295

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +++    +V+ Y  L+ G C+   + EAER+   MK  G+ PN+ +Y+ +ID  C  G +
Sbjct: 296 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNL 355

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  +F +M   G  P+  T+N L+    +A  +  V  +  +M+  G     +TY  L
Sbjct: 356 DKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTIL 415

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D   +   +E A ++ +SM + G   +   + ++   +  +GD+  A +++  + ++  
Sbjct: 416 MDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHL 475

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +PN V YN ++  +    S+   L+L KEM EN + PNV +Y   I + C    W  A  
Sbjct: 476 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEV 535

Query: 484 YIREMIEEKCLKPGSSVYEMV 504
            +++MIE   LKP  S++ M+
Sbjct: 536 LLKDMIELG-LKPSISIWNMI 555



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 1/343 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++  +VR+ L  +A+  FN+M   G  P    F+ ++ +L +     +A   F+  K   
Sbjct: 101 IINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNV 160

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           + DV  +  +++G C  G + +   V  +M+  G+ PNV  Y+ +ID  C+ G I R   
Sbjct: 161 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 220

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F +M E+    N  T+  L+    K    +  +++Y +MK  G   +  TYN +I   C
Sbjct: 221 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 280

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            DGKL +A ++ + M  +G   N  T+N +   + +   V  A R+  +MK     PN +
Sbjct: 281 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 340

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           +YN L+  + +  + D    L  +M+ +   P++ TY ILI  +    +       +REM
Sbjct: 341 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 400

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            E + L P    Y +++  L R+  ++K  ++   M   G  A
Sbjct: 401 -EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVA 442



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 2/245 (0%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V  +  +I+A  R     +A   F +M+  G  P S TFNNL+ + +K++  EK  +V+
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 153

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N+ K    + D  ++  +I   C+ G L+   +VL  M   G +PN   +  +     K 
Sbjct: 154 NETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 212

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+    +++ KM +L    N  TY +L+  F         ++L ++M+   + PNV TY
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             +I   C  G  NNA++   EM  E+ +      Y  ++  L +  ++ + E L+ +M 
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEM-RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 331

Query: 526 DRGFT 530
             G +
Sbjct: 332 RDGLS 336



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 38/255 (14%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP+L  Y+ +I+    +   D A    + MKS     ++ T++IL+  +  A  +A    
Sbjct: 336 SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 395

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               ME  G +P K+ ++I++  L R     +A   + S+ K     D+ +Y  L+ G C
Sbjct: 396 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 455

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G++ EA ++F+ +    ++PN   Y+ +I   C+ G   RA  +  EM E G  PN  
Sbjct: 456 VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN-- 513

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
                                              +YN  I   CKD K  +A  +L  M
Sbjct: 514 ---------------------------------VASYNSTIQILCKDEKWTEAEVLLKDM 540

Query: 384 VRKGCNPNASTFNMI 398
           +  G  P+ S +NMI
Sbjct: 541 IELGLKPSISIWNMI 555



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 116/229 (50%), Gaps = 12/229 (5%)

Query: 106 SISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAG--KV 161
            +SP+ + +  +I+  C + +   L +  S FN + +  +   SP L    I +AG  + 
Sbjct: 334 GLSPNLISYNTLIDGYCSIGN---LDKASSLFNQMKSSGQ---SPSLATYNILIAGFSEA 387

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           +        +  M++R +  +  T++IL+   VR+    +A   ++ ME+ G   D   +
Sbjct: 388 KNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIY 447

Query: 222 SIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
            ++I  LC      EA   F SL +   +P+ ++Y  ++ G+C+ G+   A R+ +EM  
Sbjct: 448 GVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGE 507

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            G+ PNV +Y+  I  LC+  + T A  +  +M+E+G +P SI+  N++
Sbjct: 508 NGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKP-SISIWNMI 555


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 192/382 (50%), Gaps = 6/382 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K ++ + A   +  M+  + E    T+ IL+    + G   EA+  
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              M+  G   D + +S +IS  C K      ++ FD + +K   P+V+VY+ L+ G+C+
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G   EA  V   M   GIQP+VYTY+ +I  LC+ G+  +A D+F  M E G EP+++T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K        +++  M   G   + ++YN LI   C +GKL++A+K+ +S++
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 385 RKG--CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
             G    P+  TFN + + + K G ++ A  +Y  M +     N  T +IL+  +  S  
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  ++L K + +  + P+  TY ++I  +C M H  N  K +   ++   L P    Y 
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM-HMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 503 MVLQQLRRAGQLQKHEELVEKM 524
            ++  L +   L++   L ++M
Sbjct: 367 TLMASLCKESSLEQARRLFQEM 388



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 185/370 (50%), Gaps = 4/370 (1%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            D      D M  + +   V  +S L+  + + GL  EA    + M E G  PD   ++ 
Sbjct: 96  LDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTC 155

Query: 224 VISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I  LC+  RA +A   FD + +K  EP  + Y  L+ G C+ G I +A ++F  M   G
Sbjct: 156 MIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG 215

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG--CEPNSITFNNLMRVHVKASRTEK 340
            +  V +Y+ +I  LC  G++  A  +F+ +LE G   EP+ ITFN +++   K  R +K
Sbjct: 216 KRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            +++Y+ M   G   +  T + LI  + K G ++ A+++   + + G  P+++T++++  
Sbjct: 276 AVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
              K+  +N A  ++ +MK     P    YN LM       S +   +L +EM+E+  EP
Sbjct: 336 GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +  ++ I+I      G  ++A + + +M ++  L P +  Y   + +L + GQ+++ +  
Sbjct: 396 DTISFNIMIDGTLKAGDIHSAKELLNDM-QQMGLTPDAYTYSSFINRLSKLGQMEEAKGA 454

Query: 521 VEKMVDRGFT 530
            + M+  G T
Sbjct: 455 FDSMIASGIT 464



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 160/366 (43%), Gaps = 40/366 (10%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y     + G  K  +   A    DLM  +  E +  T+++L+    + G   +A   
Sbjct: 148 PDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKI 207

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGW 262
           F  M E G   + ++++ +I  LC   +  EA   F SL +     EPDVI +  +++G 
Sbjct: 208 FETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGL 267

Query: 263 CRAGNISEAERVFREM-----------------------------------KMAGIQPNV 287
           C+ G + +A  ++  M                                      G+ P+ 
Sbjct: 268 CKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSS 327

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TYS++ID  C+   +  A  +F+ M   G  P    +N LM    K S  E+  +++ +
Sbjct: 328 TTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQE 387

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           MK   CE DTI++N +ID   K G +  A ++LN M + G  P+A T++     +SKLG 
Sbjct: 388 MKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQ 447

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +  A   +  M      P+   Y+ L++ F  +   + V+ L ++M +  V  ++     
Sbjct: 448 MEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNS 507

Query: 468 LITMYC 473
           ++T  C
Sbjct: 508 ILTFLC 513



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 137/280 (48%), Gaps = 1/280 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD++ Y  ++ G C+   + +A  +  EM+ +  +PN +TY I++D LC+ G++  A  +
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             EM   G E + + ++ L+         ++   ++++M   G   + + Y+ LI+  CK
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G   +A  VL++M  +G  P+  T+  +   + K G    A  ++  M +   EP+TVT
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN+L+             K+ + M E      V +Y  LI   C  G  + A K    ++
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 490 EE-KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           E+   ++P    +  V+Q L + G+L K  E+ + M++RG
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG 287



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 4/178 (2%)

Query: 125 GIPLLQVLSFFNWVTARPEFVH-SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
           G   + +L+F   + +R +    SP L  Y+ ++    K    + A      MK  N E 
Sbjct: 336 GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
              +F+I++   ++AG    A    N M++ G  PD   +S  I+ L +  +  EA+  F
Sbjct: 396 DTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAF 455

Query: 242 DSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           DS+      PD  VY +L++G+     I E   + R+M   G+  ++   + ++  LC
Sbjct: 456 DSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 197/412 (47%), Gaps = 12/412 (2%)

Query: 128 LLQVLSFFNWVTARPEFVHS-------PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRN 178
           L+   +   W+    + V S       PDL  Y+ +     +  + D A+   D M+   
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343

Query: 179 VEIT-VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
             +  V T++ LV    +   +++A+     M + G  P  +  +IV+  LC++ +  EA
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 238 QSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
               + + ++   PDVI Y  L+  +C+AGN+++A  +  EM   G++ + +T + V+  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LC+  +   A ++     + G  P+ +++  +M  + K    E  L++++QM        
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TYN LI   C+  +L++AI  LN  V KG  P+ +T+N+I     K GD+  A R + 
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           KM +   +P+ VT N LM         D  LKL +   E   + +V TY  LI   C +G
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + A  +  +M E K L+P +  Y +VL  L  AG+ ++   ++ K+ D G
Sbjct: 644 DVDTALHFFDDM-EVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 155/336 (46%), Gaps = 7/336 (2%)

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF--FDSLKD-KFEPDVIV 254
           LAA+ +H+  R    G  P   A + V+S L R        S   F SL + +  P+   
Sbjct: 153 LAAQLLHSLRR--RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYT 210

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           +  LV   C  G +++A      M+  G+ P+  TY+ +++A CR G +  A  + A M 
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  P   T+N L+    +    ++  +V   M   G E D  TYN L    C+ GK++
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330

Query: 375 DAIKVLNSMVRKGCN-PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +A ++ + M R G   P+  T+N +     K    + A R+  +M+D   +P  VT+NI+
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++        +  L   +++ E  + P+V TY  LI  YC  G+   A+  + EM+  K 
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV-GKG 449

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           LK  +     VL  L +  + +  EEL+     RGF
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGF 485



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 2/179 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A    +    +  ++ V T++ L++   + G    A+H F+ ME  G  PD   ++
Sbjct: 609 KLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYN 668

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVR-GWCRAGNISEAERVFREMKMA 281
           +V+S L    R+ EA +    L D  +        L++       ++ E E         
Sbjct: 669 VVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSE 728

Query: 282 GIQPNVY-TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             Q N   TY   ++ LC  GQ+  A  V  EM++ G   +  T+  LM   +K  + +
Sbjct: 729 KAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQ 787


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 198/431 (45%), Gaps = 35/431 (8%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ--------------------------FD 165
           L FF W  ++  F H+ + Y  +++L  + R                           FD
Sbjct: 147 LKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFD 206

Query: 166 LAWHFIDLMKSRNVEIT-VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           + W       +RN+ ++    F +L   +V  GL  EA   F+RM  +   P   + + +
Sbjct: 207 MLW------STRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 260

Query: 225 ISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +  L +       + FF D +     P V  Y  ++   C+ G++  + R+F +M+  G+
Sbjct: 261 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 320

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P+V TY+ +ID   + G +     +F EM +VGC P+ IT+N L+  + K  +  +  +
Sbjct: 321 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 380

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            +++MK  G + + +TY+ LID  CK+G ++ AIK+   M R G  PN  T+  +     
Sbjct: 381 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANC 440

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G++  A ++   M     + N VTY  L+     +       ++ + M ++ + PN  
Sbjct: 441 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 500

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
            Y  L+  Y       +A K +++M E   +KP   +Y  ++       +L++ + ++E+
Sbjct: 501 VYTALVHGYIKAERMEDAMKILKQMTECN-IKPDLILYGSIIWGHCSQRKLEETKLILEE 559

Query: 524 MVDRGFTARPL 534
           M  RG +A P+
Sbjct: 560 MKSRGISANPV 570



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 181/383 (47%), Gaps = 4/383 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +I+  GKV   +      + MK       + T++ L+  Y +      A  
Sbjct: 321 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 380

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWC 263
            F+ M+  G  P+ + +S +I   C++     A + F D  +    P+   YT+L+   C
Sbjct: 381 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANC 440

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AGN++EA ++  +M  AG++ N+ TY+ ++D LC+ G++  A +VF  ML+ G  PN  
Sbjct: 441 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 500

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +  L+  ++KA R E  +++  QM     + D I Y  +I  HC   KLE+   +L  M
Sbjct: 501 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 560

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             +G + N      I     K G  + A   + +M+D+  E   VTY +L+     +   
Sbjct: 561 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIV 620

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           ++ +     M    ++PNV  Y  LI   C      +A K   EM + + + P  + +  
Sbjct: 621 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM-QCRGMTPDITAFTA 679

Query: 504 VLQQLRRAGQLQKHEELVEKMVD 526
           ++    + G LQ+   L+ +M +
Sbjct: 680 LIDGNLKHGNLQEALVLISRMTE 702



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 183/402 (45%), Gaps = 39/402 (9%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L   F + M    +  +V T+++++    + G    +   F +M E G +PD + ++ +I
Sbjct: 272 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 331

Query: 226 SILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
               +     E  S F+ +KD    PD+I Y  L+  +C+   +  A   F EMK  G++
Sbjct: 332 DGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 391

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV TYS +IDA C+ G +  A  +F +M   G  PN  T+ +L+  + KA    +  ++
Sbjct: 392 PNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 451

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            N M + G + + +TY  L+D  CK G++ +A +V  SM++ G +PN   +  +     K
Sbjct: 452 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 511

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYN-----------------ILMQM----------- 436
              +  A ++  +M +   +P+ + Y                  IL +M           
Sbjct: 512 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 571

Query: 437 --------FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
                   F   KS+D  L   +EM++  VE  + TY +LI   C  G    A  Y   M
Sbjct: 572 STTIIDAYFKAGKSSD-ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRM 630

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +    L+P  +VY  ++  L +   ++  ++L ++M  RG T
Sbjct: 631 LSLG-LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMT 671



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 182/420 (43%), Gaps = 39/420 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K  +   A+ +   MK+  ++  V T+S L+  + + G+   A+  
Sbjct: 357 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 416

Query: 206 FNRMEEYGCAPDKIAFSIVISI-----------------------------------LCR 230
           F  M   G  P++  ++ +I                                     LC+
Sbjct: 417 FVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 476

Query: 231 KRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             R  EA+  F S LKD   P+  VYT LV G+ +A  + +A ++ ++M    I+P++  
Sbjct: 477 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 536

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y  +I   C   ++     +  EM   G   N +    ++  + KA ++   L  + +M+
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
            +G EA  +TY  LID  CK G +E A+     M+  G  PN + +  +   + K   + 
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIE 656

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A +++ +M+     P+   +  L+       +    L L   M E  +E +++ Y  L+
Sbjct: 657 SAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 716

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + +   G  + A K+  EMIE+  L P   +   +L++  + GQL +  EL  +M   G 
Sbjct: 717 SGFSQCGELHQARKFFNEMIEKGIL-PEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 1/197 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A +F   M+   VE T+ T+ +L+    +AG+   AV  F RM   G  P+   ++ +I 
Sbjct: 588 ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 647

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC+      A+  FD ++ +   PD+  +T L+ G  + GN+ EA  +   M    I+ 
Sbjct: 648 GLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 707

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +++ Y+ ++    +CG++ +A   F EM+E G  P  +    L+R + K  + ++ +++ 
Sbjct: 708 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELK 767

Query: 346 NQMKRLGCEADTITYNF 362
           N+M+R+G   ++ T  F
Sbjct: 768 NEMERMGLITESATMQF 784



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 123/250 (49%), Gaps = 3/250 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y  +I      R+ +     ++ MKSR +       + ++  Y +AG +++A++ 
Sbjct: 532 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 591

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  M++ G     + + ++I  LC+      A  +F   L    +P+V VYT+L+ G C+
Sbjct: 592 FQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              I  A+++F EM+  G+ P++  ++ +ID   + G +  A  + + M E+  E +   
Sbjct: 652 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV 711

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+    +     +  + +N+M   G   + +    L+  + K G+L++AI++ N M 
Sbjct: 712 YTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 771

Query: 385 RKGCNPNAST 394
           R G    ++T
Sbjct: 772 RMGLITESAT 781


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 220/483 (45%), Gaps = 27/483 (5%)

Query: 53  SPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPS-----LSLGFSQISTAHSI 107
           SP ++L+++K  + +K H  +  + S+N  P    +  + S     L L F   +  H  
Sbjct: 18  SPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNNQELILKFLTWANPHQF 77

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
                   +   C   H   +L     +       E V +  L  E  +L  +  Q    
Sbjct: 78  ------FTLRCKCITLH---ILTRFKLYKTAQTLAEDVAAKTLDDEDASLVFRSLQ---- 124

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
               DL  S     T   F ++V+ Y R  L  +A+   +  + +G  P  ++++ V+  
Sbjct: 125 -ETYDLCNS-----TSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDA 178

Query: 228 LCR-KRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             R KR  S A++ F + L+ +  P+V  Y  L+RG+C AGN+  A R F  M+  G  P
Sbjct: 179 TIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLP 238

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+ +ID  C+  +I    ++   M   G EPN I++N ++    +  R +++  V 
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL 298

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M + G   D +TYN LI  +CK+G    A+ +   M+R G +P+  T+  +   + K 
Sbjct: 299 TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G++N A     +M+     PN  TY  L+  F+     +   ++ KEM +N   P+V TY
Sbjct: 359 GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI  +C  G   +A   + +M +EK L P    Y  VL    R+  + +   +  KMV
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDM-KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477

Query: 526 DRG 528
            +G
Sbjct: 478 AKG 480



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 178/369 (48%), Gaps = 5/369 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           LAG     D+A  F D M+ +     V T++ L+  Y +     +       M   G  P
Sbjct: 217 LAG---NLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEP 273

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + I++++VI+ LCR+ R  E       + K  +  D + Y  L++G+C+ GN  +A  + 
Sbjct: 274 NLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM   G+ P+V TY+ +I ++C+ G + RA +   +M   G  PN  T+  L+    + 
Sbjct: 334 AEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQK 393

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               +  +V  +M   G     +TYN LI+ HC  GK+ DAI VL  M  KG  P+  ++
Sbjct: 394 GYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSY 453

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           + +     +  DV+ A R+  KM     +P+T+TY+ L+Q F   + T     L  EM  
Sbjct: 454 STVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLR 513

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             + P+  TY  LI  YC  G    A +   EM+E+  L P    Y +++  L +  + +
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL-PDVVTYSVLINGLNKQARTR 572

Query: 516 KHEELVEKM 524
           + + L+ K+
Sbjct: 573 EAKRLLLKL 581



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 169/349 (48%), Gaps = 22/349 (6%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           +V T++ L+    +AG    A    ++M   G  P++  ++ ++    +K   +EA    
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             + D  F P V+ Y  L+ G C AG + +A  V  +MK  G+ P+V +YS V+   CR 
Sbjct: 404 KEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS 463

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
             +  A  V  +M+  G +P++IT+++L++   +  RT++   ++++M R+G   D  TY
Sbjct: 464 YDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTY 523

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             LI+ +C +G L+ AI++ N MV KG  P+  T++++   ++K      A R+  K+  
Sbjct: 524 TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFY 583

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
            +  P+ VTY+ L+                    EN       +   LI  +C  G    
Sbjct: 584 EESVPSDVTYHTLI--------------------ENCSNIEFKSVVSLIKGFCMKGMMTE 623

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A +    M+ EK  KP  + Y +++    R G ++K   L ++MV  GF
Sbjct: 624 ADQVFESML-EKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 163/333 (48%), Gaps = 10/333 (3%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNL 258
            +H   R + Y     K A ++   +  +     +A   F SL++ ++       V+  +
Sbjct: 86  TLHILTRFKLY-----KTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLV 140

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ-ITRAHDVFAEMLEVG 317
           V+ + R   I +A  +    +  G  P V +Y+ V+DA  R  + I+ A +VF EML+  
Sbjct: 141 VKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQ 200

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN  T+N L+R    A   +  L+ +++M++ GC  + +TYN LID +CK  K++D  
Sbjct: 201 VSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGF 260

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           ++L SM  KG  PN  ++N++   + + G +     +  +M       + VTYN L++ +
Sbjct: 261 ELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGY 320

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
               +    L +  EM  + + P+V TY  LI   C  G+ N A +++ +M   + L P 
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM-RVRGLCPN 379

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              Y  ++    + G + +   ++++M+D GF+
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFS 412



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 112/227 (49%), Gaps = 18/227 (7%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+  Y   G   +A+   N M E G  PD + +S++I+ L ++ R  EA+     L
Sbjct: 522 TYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKL 581

Query: 245 --KDKFEPDVIVYT--------------NLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
             ++    DV  +T              +L++G+C  G ++EA++VF  M     +P+  
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGT 641

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+++I   CR G I +A+ ++ EM++ G   +++T   L++   K  +  ++  V   +
Sbjct: 642 AYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANV 701

Query: 349 KRLGCE-ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
            R  CE ++      L++ + ++G ++  + VL  M + G  PN  +
Sbjct: 702 LR-SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGKS 747


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 145/324 (44%), Gaps = 5/324 (1%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
            + M   GC PD + ++ ++S+LC+  R  EA     ++     P    Y  +V   CR 
Sbjct: 159 LDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP----PVAASYNAIVLALCRE 214

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             + E   V  +M   G+QPNV TY+ ++DA C+ G++  A  + A M+  GC PN +TF
Sbjct: 215 FRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTF 274

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             L+R      R    L ++  M   G    T++YN LI   C  G L+ A  +LNSM +
Sbjct: 275 TALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ 334

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            GC PN  T++ +    SK GD+ GA  ++  M    C+PN V Y  ++ +F      + 
Sbjct: 335 HGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQ 394

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L  +M      PN  T+  LI   C       A     EM    C+ P    Y  ++
Sbjct: 395 AKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCV-PNGRTYNELI 453

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L R G       +V +M   G 
Sbjct: 454 HGLFREGNCGDALHMVTEMQSHGI 477



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 2/357 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R ++  V T++ +V  + +AG    A     RM   GC P+ + F+ ++  L    R
Sbjct: 227 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 286

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A   +  +  + + P  + Y  L+RG C  G++  A  +   M+  G  PNV TYS 
Sbjct: 287 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 346

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID   + G +  A  ++ +M   GC+PN + + N++ V  K     +   + ++M    
Sbjct: 347 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 406

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C  +T+T+N LI   C   ++  A+ V + M R GC PN  T+N +   + + G+   A 
Sbjct: 407 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 466

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            M  +M+    E + VTYN ++     ++ +   +    +M    ++PN  T+  +I  Y
Sbjct: 467 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 526

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C  G    A   +  M    C +    VY +++ +L    +L      + KM+  G 
Sbjct: 527 CKEGEVRMAAWMLGAMNVVNCHR-NILVYTILMAELCNQDKLVDAMTYLLKMLYEGI 582



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 3/287 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++IL+R     G    A    N ME++GC P+   +S +I    +      A S ++ +
Sbjct: 308 SYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 367

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +   +P+V+VYTN+V  +C+    ++A+ +  +M +    PN  T++ +I +LC C ++
Sbjct: 368 SRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRV 427

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            RA  VF EM   GC PN  T+N L+    +       L +  +M+  G E   +TYN +
Sbjct: 428 GRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTV 487

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +   C+     +A+  +  M+ +G  PNA TF+ I     K G+V  A  M G M  + C
Sbjct: 488 VSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNC 547

Query: 424 EPNTVTYNILM-QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             N + Y ILM ++    K  D +  L K + E  + PN  T+ +L+
Sbjct: 548 HRNILVYTILMAELCNQDKLVDAMTYLLKMLYEG-IYPNTVTWNVLV 593



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 158/370 (42%), Gaps = 36/370 (9%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR-MEEYGCA- 215
           AG V    LA   +  M+ R V  T       V  + RAG    A+  F R + + GCA 
Sbjct: 68  AGDVDGVQLA---LQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCAR 124

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           P + A     ++    RRA+  +++                      C+   +  A ++ 
Sbjct: 125 PHRAA-----ALQPPHRRAAAGRTW--------------------ALCQNNRVGAARKML 159

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM   G  P+  TY+ ++  LC+  ++  A +V A M      P + ++N ++    + 
Sbjct: 160 DEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCRE 214

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R ++V  V + M   G + + ITY  ++D  CK G+L  A  +L  MV  GC PN  TF
Sbjct: 215 FRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTF 274

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             + R +   G V+ A  M+  M      P+TV+YNIL++   +         +   ME+
Sbjct: 275 TALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ 334

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
           +   PNV TY  LI  +   G    A     +M    C KP   VY  ++    +     
Sbjct: 335 HGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC-KPNVVVYTNMVDVFCKKLMFN 393

Query: 516 KHEELVEKMV 525
           + + L++KM+
Sbjct: 394 QAKSLIDKML 403



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 53/342 (15%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L  + W+ A   +  S   Y+ +I     V     A   ++ M+       V T+S L+ 
Sbjct: 291 LDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 349

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEP 250
            + +AG    A+  +N M   GC P+ + ++ ++ + C+K   ++A+S  D  L +   P
Sbjct: 350 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 409

Query: 251 DVIVYTNLVRGWC-----------------------------------RAGNISEAERVF 275
           + + +  L+R  C                                   R GN  +A  + 
Sbjct: 410 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 469

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM+  GI+ ++ TY+ V+  LC+      A     +M+  G +PN+ TF+ ++  + K 
Sbjct: 470 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 529

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
                   +   M  + C  + + Y  L+   C   KL DA+  L  M+ +G  PN  T+
Sbjct: 530 GEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 589

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKC-EPNTVTYNILMQM 436
           N++ R               G  ++L C EP+    +I M +
Sbjct: 590 NVLVR---------------GVFRNLGCIEPSDFIQHITMNL 616


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 183/385 (47%), Gaps = 2/385 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P + H ++  A +   F  A   + ++ ++   +     +++V      G   E V   
Sbjct: 142 TPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELL 201

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRA 265
            ++  +GC PD ++++ V+  LC  +R  + +    + ++    P+V  +  L+   CR 
Sbjct: 202 RKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRN 261

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G   +      +M   G  P++  Y+ +ID +C+ G    A+D+ + M   G +PN + +
Sbjct: 262 GLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCY 321

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N +++    A R E+   +  +M +  C  D +T+N L+D  C++G ++  I++L  M+ 
Sbjct: 322 NTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 381

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            GC P+  T+  +     K G V+ A  +   M    C+PNT++Y I+++    ++    
Sbjct: 382 HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVD 441

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             +L   M +    PN  T+  LI   C  G    A + +++M+   C  P    Y  V+
Sbjct: 442 AQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVI 500

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFT 530
             L +AG+ ++  EL+  M+++G T
Sbjct: 501 DGLGKAGKTEEALELLNVMINKGIT 525



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 168/357 (47%), Gaps = 3/357 (0%)

Query: 142 PEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           PE   +PDL  Y  +I+   K    ++A   +  M S  ++  V  ++ +++    A   
Sbjct: 275 PEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERW 334

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNL 258
            EA      M +  C  D + F+I++   C+           +  L+    PDVI YT +
Sbjct: 335 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 394

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+C+ G + EA  + + M   G +PN  +Y+IV+  LCR  +   A ++ + M++ GC
Sbjct: 395 INGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGC 454

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            PN +TFN L+    K    E+ +++  QM   GC  D I+Y+ +ID   K GK E+A++
Sbjct: 455 LPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 514

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           +LN M+ KG  PN   ++ +   +S+ G  +   +M+  ++D     +   YN ++    
Sbjct: 515 LLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLC 574

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
               TD  +     M  N   PN +TY ILI      G    A   + E+   + ++
Sbjct: 575 KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVR 631



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 159/351 (45%), Gaps = 2/351 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  +VR     GL A+A+   + M   GCA       +++   CR      A      L
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169

Query: 245 KDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K         NLV    C  G + E   + R++   G +P++ +Y+ V+  LC   + 
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRW 229

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  EM+ VGC PN  TFN L+    +    E+V +  +QM   GC  D   Y  +
Sbjct: 230 DDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATI 289

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CKDG  E A  +L+ M   G  PN   +N + + +        A  +  +M    C
Sbjct: 290 IDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             + VT+NIL+  F  +   D V++L ++M E+   P+V TY  +I  +C  G  + A  
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            ++ M    C KP +  Y +VL+ L RA +    +EL+  M+ +G    P+
Sbjct: 410 LLKNMSACGC-KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV 459



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 153/344 (44%), Gaps = 8/344 (2%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
            S L+R    AG  A+A  A   ++  G A   +A++ +I+  CR  + + A+    ++ 
Sbjct: 47  LSALIRSLCAAGRTADAARA---LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               P+   Y  +VR  C  G I++A  V  EM + G         ++++A CR G    
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A      +   GC  +S   N ++    +    ++ +++  ++   GCE D ++YN ++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C   + +D  +++  MVR GC PN +TFN +   + + G     H    +M +  C P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +   Y  ++         ++   +   M    ++PNV  Y  ++   C    W  A   +
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341

Query: 486 REMIEEKCLKPGSSV-YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            EM +E C  P   V + +++    + G + +  EL+E+M++ G
Sbjct: 342 AEMFQEDC--PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 383


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 192/416 (46%), Gaps = 15/416 (3%)

Query: 94  LSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHE 153
           L+L   ++S   SI    +   ++K+   R  I  ++ L F   V +    +H    Y  
Sbjct: 167 LTLSRDRLSVKSSIVFDLLEGKLKKA---REFIGFMEGLGFKPNVVSYNTIIHG---YSS 220

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
             N+ G       A   +D M+ + +E    T+  L+    + G   EA   F++M E G
Sbjct: 221 RGNIEG-------ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 273

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P+ + ++ +I   C K     A S+ D + K    P V  Y  LV      G + EA+
Sbjct: 274 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 333

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            + +EM+  GI P+  TY+I+I+   RCG   RA D+  EML  G EP  +T+ +L+ V 
Sbjct: 334 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVL 393

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            + +R ++   ++ ++   G   D I +N +ID HC +G +E A  +L  M RK   P+ 
Sbjct: 394 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDE 453

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TFN + +   + G V  A  +  +MK    +P+ ++YN L+  +           ++ E
Sbjct: 454 VTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDE 513

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           M      P + TY  LI   C     + A + ++EM+  K + P  S Y  +++ +
Sbjct: 514 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV-NKGISPDDSTYLSLIEGM 568



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 171/330 (51%), Gaps = 8/330 (2%)

Query: 205 AFNR--MEEYGCAPDKIAF--SIVISILCRK-RRASEAQSFFDSLKDKFEPDVIVYTNLV 259
           A NR   +E   + D+++   SIV  +L  K ++A E   F + L   F+P+V+ Y  ++
Sbjct: 158 ATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLG--FKPNVVSYNTII 215

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+   GNI  A R+   M++ GI+P+ YTY  +I  +C+ G++  A  +F +M+E+G  
Sbjct: 216 HGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV 275

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN++T+N L+  +      E+     ++M + G      TYN L+     +G++ +A  +
Sbjct: 276 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 335

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           +  M +KG  P+A T+N++    S+ G+   A  ++ +M     EP  VTY  L+ + + 
Sbjct: 336 IKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 395

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                    L +++ +  V P+V  +  +I  +C  G+   A+  ++EM + K + P   
Sbjct: 396 RNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM-DRKSVPPDEV 454

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +  ++Q   R G++++   L+++M  RG 
Sbjct: 455 TFNTLMQGRCREGKVEEARMLLDEMKXRGI 484


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 191/376 (50%), Gaps = 10/376 (2%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT---FSILVRRYVRAGLAA 200
           + PD+  +  +IN   K  +   A  F+  M +R +     +   ++ L+    +A    
Sbjct: 80  YCPDMATHSMLINELCKADKIQEAQEFLQGM-NRTISTRASSCFSYNSLLNSLCKAKKVH 138

Query: 201 EAVHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNL 258
           +A   F+ M  E    PD +++SI+I   C+      A+  +  + D    P+V  Y   
Sbjct: 139 QAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 198

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G  R G I++A+ V+ EM  AG  P+V TYS +I       +  +AH++F  M+  GC
Sbjct: 199 LNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGC 258

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            PN++T+N L+    K S+ ++  +++ +M   GC+ D +TY  L+   C  GK+E A++
Sbjct: 259 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVE 318

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           V + MV KG +P+   +N + +   + G    A +++  M   +C+P+TV++NI++   +
Sbjct: 319 VFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLS 378

Query: 439 TSKSTDMVLKLKKEMEENE-VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
            +K  D  +++ + ME++    P++ TY  LI   CG    + A K  +E+   K L P 
Sbjct: 379 KAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLK-LSPD 437

Query: 498 SSVYEMVLQQLRRAGQ 513
              + ++L+ +  AG 
Sbjct: 438 PHAFNVLLEAMYAAGH 453



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 133/275 (48%), Gaps = 4/275 (1%)

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM-LE 315
           ++++  C+AG +  A  +   M   G  P++ T+S++I+ LC+  +I  A +    M   
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113

Query: 316 VGCEPNS-ITFNNLMRVHVKASRTEKVLQVYNQM-KRLGCEADTITYNFLIDCHCKDGKL 373
           +    +S  ++N+L+    KA +  +   +++ M        D ++Y+ LID  CK  +L
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A K+   M+   C PN +T+N     + + G +  A  +Y +M    C P+ +TY+ L
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +  F+ ++  D   +L + M      PN  TY  L+   C     + A++  R+M+E  C
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             P    Y  +L      G++++  E+ ++MV +G
Sbjct: 294 -DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 327


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 186/360 (51%), Gaps = 5/360 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R +   + TF+ ++    + G   +A    + M+ +G  P+ + ++ +I   C+  R
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 234 ASEAQSFFDSLKD----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             +       LK+    K  P+ + +  L+ G+C+  N+S A +VF EM+  G++P V T
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +++ LC  G++  A  +  EML    +PN IT+N L+  + K    E+  ++++ + 
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G   + IT+N L+  +CK GK+E+A  +   M+ KG  PNAST+N +     + G + 
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
               +  +M+    + +TVTYNIL+  +   K      +L  EM +  ++P+  TY IL+
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILL 520

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             YC  G+   A   +R+ +E++        Y +++Q   R G+L+    L+ +M+++G 
Sbjct: 521 NGYCMEGNLRAALN-LRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGL 579



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 150/285 (52%), Gaps = 1/285 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           TF++L+  + +    + A+  F  M+  G  P  + ++ +++ LC + + +EA+   D  
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L    +P+VI Y  L+ G+C+   + EA  +F  +   G+ PNV T++ ++   C+ G++
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKM 424

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +   MLE G  PN+ T+N L+    +  + E+V  + N+M+  G +ADT+TYN L
Sbjct: 425 EEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNIL 484

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C+  + + A ++++ M+ KG  P+  T+N++       G++  A  +  +M+    
Sbjct: 485 ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             N VTYN+L+Q +      +    L  EM E  + PN  TY I+
Sbjct: 545 WANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 191/408 (46%), Gaps = 21/408 (5%)

Query: 127 PLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           PLL VL +FNW        +S +L   ++NL    + +          K R++   +D+F
Sbjct: 87  PLL-VLRYFNWSRRELNVNYSIELICRLLNLLANAKHYP---------KIRSI---LDSF 133

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
              V+      ++    H+ +      CA   IA  +V++ +   +     ++F  +   
Sbjct: 134 ---VKGETNCSISL-IFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDY 189

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           +++  V+    L+    +       E V++EM    I PN+ T++ VI+ LC+ G++ +A
Sbjct: 190 RYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKA 249

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ---VYNQMKRLGCEADTITYNFL 363
            DV  +M   G  PN +T+N L+  + K  R  K+ +   +  +M       +++T+N L
Sbjct: 250 GDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVL 309

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CKD  L  A+KV   M  +G  P   T+N +   +   G +N A  +  +M     
Sbjct: 310 IDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNL 369

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +PN +TYN L+  +   K  +   +L   + +  + PNV T+  L+  YC  G    A+ 
Sbjct: 370 KPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF- 428

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            +++++ EK   P +S Y  ++    R G++++ + L+ +M  RG  A
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKA 476



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 143/286 (50%), Gaps = 1/286 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I+   K      A    + M+S+ ++ TV T++ LV      G   EA    + M 
Sbjct: 306 FNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEML 365

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
                P+ I ++ +I+  C+K+   EA+  FD++ K    P+VI +  L+ G+C+ G + 
Sbjct: 366 SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME 425

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  + + M   G  PN  TY+ +I   CR G++    ++  EM   G + +++T+N L+
Sbjct: 426 EAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILI 485

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +    +K  ++ ++M   G +   +TYN L++ +C +G L  A+ +   M ++G  
Sbjct: 486 SAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRW 545

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            N  T+N++ +   + G +  A+ +  +M +    PN  TY I+ +
Sbjct: 546 ANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKE 591



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 1/226 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K +  + A    D +  + +   V TF+ L+  Y + G   EA      M 
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E G  P+   ++ +I   CR+ +  E ++  + ++ +  + D + Y  L+  WC      
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+  EM   G++P+  TY+I+++  C  G +  A ++  +M + G   N +T+N L+
Sbjct: 496 KAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLI 555

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           + + +  + E    + N+M   G   +  TY  + +   + G L D
Sbjct: 556 QGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 199/399 (49%), Gaps = 8/399 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVR 191
           FF+ + A+    H P+L    + L G   +  F    +  + M+   +      F+I++ 
Sbjct: 354 FFDSMAAKG---HKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVID 410

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEP 250
            Y + G+  E +  F +M+E G  PD   + IVI+   R  R ++A   F+ +     +P
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRAHDV 309
           + IVY +L++G+C  GN+ +A+ +  EM   GI +PN+  ++ +I++LC+ G++  AHD+
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDI 530

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  ++ +G  P+ ITFN+L+  +    + EK   V + M   G E D ++YN LID +C+
Sbjct: 531 FDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCR 590

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +G+++D + +   M+ KG  P   T+ +I   +   G   GA +M  +M +     +  T
Sbjct: 591 NGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
             I++     +   D  + + K++    V+ N+     +I     +     A K + + I
Sbjct: 651 CGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA-KELFDSI 709

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               L P +S Y ++++ L + G +++ + +   M   G
Sbjct: 710 SATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 214/453 (47%), Gaps = 22/453 (4%)

Query: 90  TIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVT---ARPEFVH 146
           TIP      +   TA + +PS        S   R G P L V + FN +    ARP  V 
Sbjct: 67  TIPVPERSLNGFFTALARAPS--------SAACRDG-PSLAV-ALFNRICREEARPR-VA 115

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            P +  Y+ +++   + R+  + +          +++ V   SIL++    A  + + V+
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVN 175

Query: 205 AF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVR 260
              +RM E G  PD I+++ V+  LC   R+  A     ++  K     P+V+ Y  ++ 
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G  R G +S+A  +F EM   G+ P+V TY+ +IDALC+   + +A  V  +M+  G +P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N +T+N ++  +  + + ++   ++ +M   G   + +T N  +   CK GK ++A +  
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           +SM  KG  PN  T++++    +  G       ++  M+      +   +NI++  +   
Sbjct: 356 DSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKR 415

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D  + +  +M+E  V P+  TY I+I  +  MG   +A     +MI    LKP   V
Sbjct: 416 GMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMG-LKPEGIV 474

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           Y  ++Q     G L K +ELV +M+ RG   RP
Sbjct: 475 YHSLIQGFCMHGNLVKAKELVSEMMSRGI-PRP 506



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/431 (21%), Positives = 178/431 (41%), Gaps = 39/431 (9%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
            + +L+ FN +      V    +++ +I+  GK    D        M+ + V     T+ 
Sbjct: 383 FVDMLNLFNSMEGNG-IVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYG 441

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA--------------------------- 220
           I++  + R G  A+A+  FN+M   G  P+ I                            
Sbjct: 442 IVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSR 501

Query: 221 ---------FSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISE 270
                    F+ +I+ LC++ R  EA   FD +    E PDVI + +L+ G+   G I +
Sbjct: 502 GIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEK 561

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A  V   M  AGI+P+V +Y+ +ID  CR G+I     +F EML  G +P +IT+  ++ 
Sbjct: 562 AFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILH 621

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
                 RT    ++ ++M   G   D  T   ++   C++   ++AI +   +       
Sbjct: 622 GLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKF 681

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N +  N +   + K+     A  ++  +      PN  TY ++++      S +    + 
Sbjct: 682 NIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMF 741

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
             ME++   P+      +I +    G    A  Y+ + ++ K +   +S   +++    R
Sbjct: 742 SLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFK-VDGKRISLEASTVSLLMALFSR 800

Query: 511 AGQLQKHEELV 521
            G+  +  +L+
Sbjct: 801 EGKYWEDVKLL 811


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 189/382 (49%), Gaps = 2/382 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   K     LA   +  M  RNV+  V T+S ++    R G    A+  F  ME
Sbjct: 173 YNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 232

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G     + ++ ++  LC+  + ++  Q   D    K  P+VI +  L+  + + G + 
Sbjct: 233 TKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQ 292

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +++EM   GI PN  TY+ ++D  C   +++ A+++   M+   C P+ +TF +L+
Sbjct: 293 EANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI 352

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           + + K  R ++ ++++ ++ + G  A+T+TY+ L+   C+ GKLE A ++   MV  G  
Sbjct: 353 KGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVL 412

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+ ++   +   G +  A  ++  ++  K   + V Y I+++        +    L
Sbjct: 413 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNL 472

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+PNV TY ++I+  C  G  + A   +R+M EE   +P    Y  +++   
Sbjct: 473 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM-EEDGNEPNDCTYNTLIRAHL 531

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
           R G L    +L+E+M   GF+A
Sbjct: 532 RDGDLTASAKLIEEMKSCGFSA 553



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 192/392 (48%), Gaps = 17/392 (4%)

Query: 149 DLYHEMI---------------NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           DL+ EMI               +     +QF+L   F   M+   +   + T +I++  +
Sbjct: 51  DLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCF 110

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDV 252
            R      A     ++ + G  PD   F+ +I+ LC + + SEA      + ++  +P+V
Sbjct: 111 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNV 170

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + Y ++V G C++G+ S A  + R+M    ++ +V+TYS +ID+LCR G I  A  +F E
Sbjct: 171 VTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 230

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   G + + +T+N+L+    KA +    +Q+   M       + IT+N LID   K+GK
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           L++A ++   M+ KG +PN  T+N +         ++ A+ M   M    C P+ VT+  
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L++ +   K  D  +KL +++ +  +  N  TY IL+  +C  G    A +  +EM+   
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            L P    Y ++L  L   G+L+K  E+ E +
Sbjct: 411 VL-PDVMTYGILLDGLCDNGKLEKALEIFEDL 441



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 171/329 (51%), Gaps = 1/329 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++    K  +++     +  M SR +   V TF++L+  +V+ G   EA   +  M 
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P+ I ++ ++   C + R SEA +  D + ++   PD++ +T+L++G+C+   + 
Sbjct: 303 TKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E  ++FR++   G+  N  TYSI++   C+ G++  A ++F EM+ +G  P+ +T+  L+
Sbjct: 363 EGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILL 422

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + EK L+++  +++     D + Y  +I+  CK GK+EDA  +  S+  KG  
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVK 482

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+ ++   + K G ++ A+ +  KM++   EPN  TYN L++            KL
Sbjct: 483 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKL 542

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHW 478
            +EM+      + ++ +++I M      W
Sbjct: 543 IEEMKSCGFSADASSIKMVIDMLSSAVWW 571



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 36/291 (12%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + ++ +  P ++ ++    G       +      ++M++ GI  N+YT +I+I+  CR
Sbjct: 53  FQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCR 112

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C +   A+ V  +++                                   +LG E DT T
Sbjct: 113 CCKTCFAYSVLGKVM-----------------------------------KLGYEPDTTT 137

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N LI+  C + K+ +A+ ++  MV  GC PN  T+N I   I K GD + A  +  KM 
Sbjct: 138 FNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMD 197

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +   + +  TY+ ++         D  + L KEME   ++ ++ TY  L+   C  G WN
Sbjct: 198 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWN 257

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  + +++M   K + P    + +++    + G+LQ+  EL ++M+ +G +
Sbjct: 258 DGVQLLKDMTSRKII-PNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 1/162 (0%)

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           D K +DAI +   M+R    P+   F+  F  ++     N       KM+      N  T
Sbjct: 43  DIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
            NI++  F     T     +  ++ +   EP+  T+  LI   C     + A   +  M+
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           E  C +P    Y  ++  + ++G      +L+ KM +R   A
Sbjct: 163 ENGC-QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 181/378 (47%), Gaps = 3/378 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+ + G+  Q  +A    DL+      + V  ++ ++  Y R G    A+  F +M+E G
Sbjct: 186 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIG 245

Query: 214 CAPDKIAFSIVISILCRKRRASE-AQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
             P  + +++++ +  +  R+ +      D ++ K  E D    + ++    R G + EA
Sbjct: 246 LDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEA 305

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            +   E+K  G +P   TY+ ++    + G  T A  +  EM +  C P+S+T+N L   
Sbjct: 306 RKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAAT 365

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +V+A   ++ + V + M   G   + ITY  +ID + K G+ +DA+++ + M   GC PN
Sbjct: 366 YVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPN 425

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+N +   + K        ++  +MK   C PN  T+N ++ + +     + V K+ +
Sbjct: 426 VYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLR 485

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM+    EP+ +T+  LI+ Y   G   ++ K   EM++     P  + Y  +L  L R 
Sbjct: 486 EMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSG-FTPCVTTYNALLNALARR 544

Query: 512 GQLQKHEELVEKMVDRGF 529
           G  +  E +++ M  +GF
Sbjct: 545 GDWKAAESVIQDMRTKGF 562



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 166/342 (48%), Gaps = 2/342 (0%)

Query: 151 YHEMINLAGKV-RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ M+++ GK+ R +D     +D M+S+ +E+   T S ++    R G+  EA      +
Sbjct: 253 YNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAEL 312

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           +  G  P  + ++ ++ +  +    +EA S    ++D    PD + Y  L   + RAG +
Sbjct: 313 KFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFL 372

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            E   V   M   G+ PN  TY+ VIDA  + G+   A  +F+ M ++GC PN  T+N++
Sbjct: 373 DEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSV 432

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + +  K SRTE V++V  +MK  GC  +  T+N ++    ++GK     KVL  M   G 
Sbjct: 433 LAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGF 492

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  TFN +    ++ G    + +MYG+M      P   TYN L+   A          
Sbjct: 493 EPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAES 552

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           + ++M     +PN N+Y +L+  Y   G+     K  +E+ +
Sbjct: 553 VIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYD 594



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 181/378 (47%), Gaps = 20/378 (5%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I+  G+    D A  F+  +K    +    T++ +++ + +AG+  EA+     ME+  
Sbjct: 292 VISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNN 351

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD + ++ + +   R     E  +  D++  K   P+ I YT ++  + +AG   +A 
Sbjct: 352 CPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDAL 411

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV---GCEPNSITFNNLM 329
           R+F  MK  G  PNVYTY+ V+  L   G+ +R  DV   + E+   GC PN  T+N ++
Sbjct: 412 RLFSLMKDLGCAPNVYTYNSVLAML---GKKSRTEDVIKVLCEMKLNGCAPNRATWNTML 468

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            V  +  +   V +V  +MK  G E D  T+N LI  + + G   D+ K+   MV+ G  
Sbjct: 469 AVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFT 528

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P  +T+N +   +++ GD   A  +   M+    +PN  +Y++L+  ++ + +   + K+
Sbjct: 529 PCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKV 588

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM------IEEKCLKPGSSVYEM 503
           +KE+ +  V P+    R L+         N+  +++R M      +++   KP   V   
Sbjct: 589 EKEIYDGHVFPSWILLRTLVLT-------NHKCRHLRGMERAFDQLQKYGYKPDLVVINS 641

Query: 504 VLQQLRRAGQLQKHEELV 521
           +L    R     K  E++
Sbjct: 642 MLSMFARNKMFSKAREML 659



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/445 (20%), Positives = 188/445 (42%), Gaps = 72/445 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+     +    D     ID M S+ V     T++ ++  Y +AG   +A+  F+ M+
Sbjct: 359 YNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMK 418

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----------------------- 247
           + GCAP+   ++ V+++L +K R  +       +K                         
Sbjct: 419 DLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHN 478

Query: 248 -------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                        FEPD   +  L+  + R G+  ++ +++ EM  +G  P V TY+ ++
Sbjct: 479 YVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALL 538

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV---------- 344
           +AL R G    A  V  +M   G +PN  +++ L+  + KA   + + +V          
Sbjct: 539 NALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVF 598

Query: 345 -------------------------YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                                    ++Q+++ G + D +  N ++    ++     A ++
Sbjct: 599 PSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREM 658

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L+ +   G  PN  T+N +     + G+   A  +   +++   EP+ V+YN +++ F  
Sbjct: 659 LHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCR 718

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                  + +  EM    ++P + TY   ++ Y GM  ++ A + IR MIE  C +P   
Sbjct: 719 KGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNC-RPSEL 777

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
            Y++++    +AG+ ++  + V K+
Sbjct: 778 TYKILVDGYCKAGKYEEAMDFVSKI 802



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 151/318 (47%), Gaps = 1/318 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK+   E   DTF+ L+  Y R G   ++   +  M + G  P    ++ +++ L R+  
Sbjct: 487 MKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGD 546

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A+S    ++ K F+P+   Y+ L+  + +AGN+   E+V +E+    + P+      
Sbjct: 547 WKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRT 606

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++    +C  +      F ++ + G +P+ +  N+++ +  +     K  ++ + +   G
Sbjct: 607 LVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECG 666

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + +  TYN L+D + ++G+   A +VL  +   G  P+  ++N + +   + G +  A 
Sbjct: 667 LQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAI 726

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +  +M     +P  VTYN  +  +A  +  D   ++ + M E+   P+  TY+IL+  Y
Sbjct: 727 GVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGY 786

Query: 473 CGMGHWNNAYKYIREMIE 490
           C  G +  A  ++ ++ E
Sbjct: 787 CKAGKYEEAMDFVSKIKE 804



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 141/315 (44%), Gaps = 3/315 (0%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D     +++ IL R+ + S A   FD +  +K+  DV  YT ++  + R G    A  +F
Sbjct: 179 DNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLF 238

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQ-ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
            +MK  G+ P + TY++++D   + G+   R  ++  EM   G E +  T + ++    +
Sbjct: 239 GKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGR 298

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
               ++  +   ++K  G +  T+TYN ++    K G   +A+ +L  M    C P++ T
Sbjct: 299 EGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVT 358

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N +     + G ++    +   M      PN +TY  ++  +  +   D  L+L   M+
Sbjct: 359 YNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMK 418

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           +    PNV TY  ++ M        +  K + EM    C  P  + +  +L      G+ 
Sbjct: 419 DLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGC-APNRATWNTMLAVCSEEGKH 477

Query: 515 QKHEELVEKMVDRGF 529
               +++ +M + GF
Sbjct: 478 NYVNKVLREMKNCGF 492



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 127/274 (46%), Gaps = 5/274 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   +   +  A   I  M+++  +   +++S+L+  Y +AG           + 
Sbjct: 534 YNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIY 593

Query: 211 EYGCAPDKIAFSIVISI--LCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           +    P  I    ++     CR  R  E    FD L K  ++PD++V  +++  + R   
Sbjct: 594 DGHVFPSWILLRTLVLTNHKCRHLRGMERA--FDQLQKYGYKPDLVVINSMLSMFARNKM 651

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            S+A  +   +   G+QPN++TY+ ++D   R G+  +A +V   +   G EP+ +++N 
Sbjct: 652 FSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNT 711

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++   +    ++ + V ++M   G +   +TYN  +  +      ++A +V+  M+   
Sbjct: 712 VIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHN 771

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           C P+  T+ ++     K G    A     K+K+L
Sbjct: 772 CRPSELTYKILVDGYCKAGKYEEAMDFVSKIKEL 805



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 1/179 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++  + R  + ++A    + + E G  P+   ++ ++ +  R+    +A+     +++  
Sbjct: 642 MLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSG 701

Query: 249 -EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            EPDV+ Y  +++G+CR G + EA  V  EM   GIQP + TY+  +           A+
Sbjct: 702 PEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEAN 761

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           +V   M+E  C P+ +T+  L+  + KA + E+ +   +++K L    D  +   L  C
Sbjct: 762 EVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKELDISFDDQSVKRLGSC 820


>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
 gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
          Length = 472

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 9/399 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRNVEIT-VDTFSI 188
           FF W   +  + H P  Y+EMI++      K RQF +    +D MK  N  +  V+    
Sbjct: 49  FFMWAGHQKNYSHEPCAYNEMIDILTSTKYKARQFRIVCDMLDYMKRNNKNVVPVEVLLT 108

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R Y    L      A  +       P+  AF++++  LC+   A +A+  F  +K+K 
Sbjct: 109 ILRNYTEKYLTRVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLAEDAEGLFKRVKNKV 168

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PD   Y  +  GWCR  N +   +V  EM   G  P+ +TY   IDA CR G +  A +
Sbjct: 169 KPDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAE 228

Query: 309 VFAEMLEVG---CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +F  M   G     P + T+  ++   V+ +R ++  ++   M   GC  D  T+  LI+
Sbjct: 229 LFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIE 288

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C  GK+++A + L  M  KG  P+  T+N   + + +  +   A R+Y +M +  C P
Sbjct: 289 GMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFP 348

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  T+N+L+ MF      D   +   EM++     +V+TY ++I    G     +A   I
Sbjct: 349 SVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLI 408

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            +++  K +K     ++  L QL   G ++    L E M
Sbjct: 409 EDIV-NKGMKLPYQKFDSFLMQLSVIGNIRAIHRLSEHM 446



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 6/244 (2%)

Query: 182 TVDTFSIL--VRRYVRAGLAAEAVHAFNRMEEYGC---APDKIAFSIVISILCRKRRASE 236
           T D+F+ +  +  + RAG+  EA   F  M   G    +P    ++I+I  L R  R  E
Sbjct: 204 TPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDE 263

Query: 237 AQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
                 D +     PDV  +  L+ G C AG I EA R  +EM   G  P++ TY+  + 
Sbjct: 264 CFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLK 323

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            LC       A  ++  M+E GC P+  T N L+ +  +    +   + + +M + GC  
Sbjct: 324 VLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQ 383

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D  TY  +ID      K+EDA  ++  +V KG       F+     +S +G++   HR+ 
Sbjct: 384 DVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQLSVIGNIRAIHRLS 443

Query: 416 GKMK 419
             M+
Sbjct: 444 EHMR 447


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 196/424 (46%), Gaps = 25/424 (5%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF-IDLMKS----RNVEITVDTF 186
           LSFFNW+  RP F H+   Y  M+N+  + R   +A    I ++KS     +V   ++ F
Sbjct: 85  LSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVF 144

Query: 187 ------------------SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
                             + ++    +  L  E    +  +     +P+   F+ +++  
Sbjct: 145 RKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGY 204

Query: 229 CRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C+     EA+ +   + +    PD   YT+L+ G CR   +  A  VF  M   G Q N 
Sbjct: 205 CKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNE 264

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            +Y+ +I  LC  G+I  A  +FA+M E  C P   T+  L+     + R  + L ++N+
Sbjct: 265 VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           MK  GCE +  TY  LID  CK+ K+++A K+L+ M  KG  P+  T+N +     K G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A  +   M+   C PNT TYN L+      +     + L  +M E ++ P++ TY  
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI   C +    +AY+ +  ++ E  L P    Y + +  L + G++++   L + +  +
Sbjct: 445 LIHGQCKVNDLESAYRLL-SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503

Query: 528 GFTA 531
           G  A
Sbjct: 504 GVKA 507



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 188/385 (48%), Gaps = 4/385 (1%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++Y  + M+N   K+     A  +   +    +     T++ L+  + R      A  
Sbjct: 191 SPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYE 250

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWC 263
            F  M + GC  ++++++ +I  LC   R +EA   F D  +D   P V  YT L+    
Sbjct: 251 VFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALS 310

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +G   EA  +F EMK  G +PNV+TY+++ID LC+  ++  A  + +EM E G  P+ +
Sbjct: 311 GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+  + K    +   ++ + M+   C  +T TYN LI   CK  K+  A+ +LN M
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + +  +P+  T+N +     K+ D+  A+R+   M +    P+  TY++ +         
Sbjct: 431 LERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRV 490

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +    L   ++   V+ N   Y  LI  YC +G  + AY  +  M+ + CL P S  Y +
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL-PNSYTYNV 549

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           +++ L +  ++++   LV KM+  G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMG 574



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 193/399 (48%), Gaps = 20/399 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A   +  M  + +  +V T++ L+  Y + G+  +A    + ME
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
              C P+   ++ +I  LC+KR+  +A +  +  L+ K  P +I Y +L+ G C+  ++ 
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+   M   G+ P+ +TYS+ ID LC+ G++  A  +F  +   G + N + +  L+
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K  + +    +  +M    C  ++ TYN LI+  CK+ K+++A  ++  M+  G  
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+ ++   + K G  + A +++  M  L  +P+  TY   +  + +    + V  +
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M E  + P++ TY +LI  Y  +G  + A+ +++ M++  C KP   +  ++++ L 
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC-KPSLYIVSILIKNLS 695

Query: 510 RAGQLQKHE------------------ELVEKMVDRGFT 530
              ++++                    +L EKMV+ G T
Sbjct: 696 HENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCT 734



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 188/433 (43%), Gaps = 55/433 (12%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+I    K R+   A   ++ M  R +  ++ T++ L+    +      A    + M 
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD+  +S+ I  LC++ R  EA + FDS+K K  + + ++YT L+ G+C+ G I 
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +   M      PN YTY+++I+ LC+  ++  A  + A+ML +G +P  +T+  L+
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADT-------------------------------- 357
              +K    +  L+V+N M  LG + D                                 
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646

Query: 358 ---ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS----------K 404
              +TY  LID + + G    A   L  MV  GC P+    +++ + +S          +
Sbjct: 647 PDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSE 706

Query: 405 LG--------DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           +G        +   A +++ KM +  C  +   Y  L+  F   +  +    L   M+E 
Sbjct: 707 IGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER 766

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P+ + Y  L+   C +G +  A + +  M+E   L P    Y++++  L   G  +K
Sbjct: 767 GMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL-PLLESYKLLVCGLYIEGSNEK 825

Query: 517 HEELVEKMVDRGF 529
            + +   ++  G+
Sbjct: 826 AKAVFHGLLSCGY 838



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/454 (21%), Positives = 174/454 (38%), Gaps = 95/454 (20%)

Query: 107 ISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           +SPS + +  +I   C V       ++LS  N     P+       Y   I+   K  + 
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD----QWTYSVFIDTLCKEGRV 490

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           + A    D +K++ V+     ++ L+  Y + G    A     RM    C P+   ++++
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 225 ISILCRKRRASEAQSFF--------------------DSLKDK----------------F 248
           I  LC++++  EA S                      + LKD                 +
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV  YT  +  +   G + E + V  +M   GI P++ TY+++ID   R G   RA D
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670

Query: 309 VFAEMLEVGCEPN----SITFNNLMRVH-VKASRTEK-------------VLQVYNQMKR 350
               M++ GC+P+    SI   NL   + +K +R+E               L+++ +M  
Sbjct: 671 FLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVE 730

Query: 351 LGCEADTITY-----------------------------------NFLIDCHCKDGKLED 375
            GC  D   Y                                   N L+DC CK G   +
Sbjct: 731 HGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAE 790

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A++++++MV  G  P   ++ ++   +   G    A  ++  +       + V + +L+ 
Sbjct: 791 AVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLID 850

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                   D   +L   MEE   +PN  TY +LI
Sbjct: 851 GLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI 884



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 19/239 (7%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS--FFD 242
           T+++L+  Y R GL   A      M + GC P     SI+I  L  + R  E +S    D
Sbjct: 651 TYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGID 710

Query: 243 SLKDKFE-----------------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
           S+ +  E                  DV +Y  L+ G+C+   + EA+ +   MK  G+ P
Sbjct: 711 SVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +   Y+ ++D  C+ G    A  +   M+E G  P   ++  L+         EK   V+
Sbjct: 771 SEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 830

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + +   G   D + +  LID   K   +++  ++++ M  KGC PN  T++++   + +
Sbjct: 831 HGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 196/398 (49%), Gaps = 2/398 (0%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF W   +  + H P +Y  M+++  K +    A   + LM  R ++ T   F  ++ 
Sbjct: 67  LDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMV 126

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEP 250
            Y RAG    A+     M++ G  P+ +  +  I +L       +A  F + ++     P
Sbjct: 127 SYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMP 186

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V+ Y  L++G+C    + +A  +  EM + G  P+  +Y  V+  LC+  +I    DV 
Sbjct: 187 NVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVI 246

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M +     + +T+N L+ +  K    ++ LQ   + ++ G + D + Y+ ++D +CK+
Sbjct: 247 EKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKE 306

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+++ A +++N M  +GC P+  T+  I    S+ G+V  A +M  +M    C+PNTV+Y
Sbjct: 307 GRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSY 366

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
              ++      ++    ++ K  EE    PN  TY +++  +   G  ++A   +REMI 
Sbjct: 367 TAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMI- 425

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            K   P      ++LQ L R G++ + ++ +E+ ++ G
Sbjct: 426 GKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMG 463



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/435 (20%), Positives = 189/435 (43%), Gaps = 41/435 (9%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           +QVL+        P  +      H ++         + A  F++ M+   +   V T++ 
Sbjct: 138 MQVLTMMQKAGIEPNLLVCNTAIHVLV----MANMLEKALRFLERMQLLGIMPNVVTYNC 193

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           L++ Y       +A+   + M   GC+PDK+++  V+  LC+ RR  E     + ++D  
Sbjct: 194 LIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTK 253

Query: 248 -----------------------------------FEPDVIVYTNLVRGWCRAGNISEAE 272
                                              F+ D + Y+ +V  +C+ G + +A+
Sbjct: 254 LLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAK 313

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +  EM   G  P+V TY+ +I+   + G++ +A  +  +M + GC+PN++++   ++  
Sbjct: 314 EIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGL 373

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +   + +  ++    +      + ITY+ ++    ++GKL DA  V+  M+ KG  P  
Sbjct: 374 CQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTP 433

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
              N++ + + ++G V+ A +   +  ++ C  N V +  ++  F      +  L L  +
Sbjct: 434 VEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDD 493

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  +   P+  TY  +I      G    A +   +M+ +K + P    Y  V+ +  + G
Sbjct: 494 MYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKML-KKGIDPTPVTYRTVIHRYGQIG 552

Query: 513 QLQKHEELVEKMVDR 527
           +++    L++KM+ R
Sbjct: 553 RVEDLLNLLDKMLTR 567



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/412 (21%), Positives = 175/412 (42%), Gaps = 70/412 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K  + D A   ++ M +R     V T++ ++  + +AG   +A     +M 
Sbjct: 296 YSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMY 355

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
           ++GC P+ ++++  +  LC+K  +SEA+    + ++++  P+ I Y+ ++ G+ R G +S
Sbjct: 356 KHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLS 415

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  V REM   G  P     ++++ +LCR G++  A     E L +GC  N++ F  ++
Sbjct: 416 DACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVI 475

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +    E  L + + M       D +TY  +ID   K G++E+A ++   M++KG +
Sbjct: 476 HRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGID 535

Query: 390 PNAST---------------------------------FNMIFRCISKLGDVNGAHRMYG 416
           P   T                                 FN +   +   G++  A ++ G
Sbjct: 536 PTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLG 595

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           K                  +  T+   D                  NT  +L+  Y   G
Sbjct: 596 K------------------VLRTASRID-----------------ANTCHVLMESYLRKG 620

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +AYK    M   + L P   + E V ++L + G+ ++ + L  + V+RG
Sbjct: 621 IPLSAYKVACRMF-SRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERG 671


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 175/352 (49%), Gaps = 15/352 (4%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L+ R +RA    EA    + + +     D ++++IV++ LCR  R  + +     L D
Sbjct: 48  AALLNRRLRAAPVTEACSLLSALPD---VRDAVSYNIVLAALCR--RGGDLRQALSLLAD 102

Query: 247 -------KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
                     P+ + YT ++RG C +    EA  + R M+ +G++ +V TY  +I  LC 
Sbjct: 103 MSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCD 162

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
             ++  A ++  EM   G  PN I ++ L+R + ++ R + V +V+ +M RLG E D I 
Sbjct: 163 AAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIM 222

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +   ID  CK G++  A+KV + MV++G  PN  T+N++  C+ K G V  A  +  +M 
Sbjct: 223 FTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMD 282

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE--VEPNVNTYRILITMYCGMGH 477
           D    P+ VTYN L+   +     D  + L +EM + +  VEP+V T+  +I   C +G 
Sbjct: 283 DKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGR 342

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              A   +REM+ E+        Y  ++    R  ++     L+ +++  G 
Sbjct: 343 MRQAIS-VREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGL 393



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 147/313 (46%), Gaps = 38/313 (12%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+ +++++V+  LC  RR  EA +   S++      DV+ Y  L+RG C A  +  A  +
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             EM  +G+ PNV  YS ++   CR G+      VF EM  +G EP+ I F   +    K
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             R  K ++V + M + G E + +TYN LI+C CK+G + +A+ + N M  KG  P+  T
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292

Query: 395 FNMIFRCISKLGDVNGAHRMY---------------------------GKMK-------- 419
           +N +   +S + +++GA  +                            G+M+        
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352

Query: 420 --DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
             +  C  N VTYN L+  F      +M + L  E+  + +EP+  TY ILI  +  +  
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 478 WNNAYKYIREMIE 490
            + A  ++R M +
Sbjct: 413 VDRAEMFLRTMTQ 425



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 208/483 (43%), Gaps = 49/483 (10%)

Query: 93  SLSLGFSQISTAH-SISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD 149
           +LSL       AH +  P+ V +  V+   C  R     + +L        R + V    
Sbjct: 96  ALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGT 155

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L   + + A    + D A   +  M    V   V  +S L+R Y R+G   +    F  M
Sbjct: 156 LIRGLCDAA----ELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEM 211

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
              G  PD I F+  I  LC+K R  +A    D +  +  EP+V+ Y  L+   C+ G++
Sbjct: 212 SRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSV 271

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE--VGCEPNSITFN 326
            EA  +  EM   G+ P+V TY+ +I  L    ++  A  +  EM++     EP+ +TFN
Sbjct: 272 REALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFN 331

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +++    K  R  + + V   M   GC  + +TYN+LI    +  K+  A+ +++ ++  
Sbjct: 332 SVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISS 391

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK--------------------------- 419
           G  P++ T++++    SKL +V+ A      M                            
Sbjct: 392 GLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQA 451

Query: 420 -------DLKCEPNTVTYNILMQMFATSKSTDM--VLKLKKEMEENEVEPNVNTYRILIT 470
                  D+ C  + V Y+ +  M+   KS D+    +L ++M +  + P+  TY ILI 
Sbjct: 452 MVLFNEMDMNCGLDAVAYSTM--MYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILIN 509

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           M+  +G    A + +++M       P  +V++ +++     GQ+ K  +L+ +M  +   
Sbjct: 510 MFAKLGDLEEAERVLKQMAASG-FVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVA 568

Query: 531 ARP 533
             P
Sbjct: 569 IDP 571



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 208/488 (42%), Gaps = 24/488 (4%)

Query: 47  PDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHS 106
           P  PFL+           +L+    R  P   + S  S  PD                 +
Sbjct: 31  PAAPFLAVLLRRGRADAAALLNRRLRAAPVTEACSLLSALPDVR--------------DA 76

Query: 107 ISPSTVRHVIEKSCG-VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           +S + V   + +  G +R  + LL  +S      ARP  V     Y  ++      R+ D
Sbjct: 77  VSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVS----YTMVMRGLCASRRTD 132

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
            A   +  M++  V   V T+  L+R    A     A+     M   G  P+ I +S ++
Sbjct: 133 EAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLL 192

Query: 226 SILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
              CR  R  +    F+ + +   EPDVI++T  +   C+ G I +A +V   M   G++
Sbjct: 193 RGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLE 252

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV TY+++I+ LC+ G +  A  +  EM + G  P+ +T+N L+         +  + +
Sbjct: 253 PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312

Query: 345 YNQMKRLG--CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
             +M +     E D +T+N +I   CK G++  AI V   M  +GC  N  T+N +    
Sbjct: 313 LEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGF 372

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            ++  VN A  +  ++     EP++ TY+IL+  F+     D      + M +  +   +
Sbjct: 373 LRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAEL 432

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
             Y  L+   C +G    A     EM +  C    +  Y  ++    ++G ++  ++L++
Sbjct: 433 FHYIPLLAALCQLGMMEQAMVLFNEM-DMNC-GLDAVAYSTMMYGACKSGDIKAAKQLLQ 490

Query: 523 KMVDRGFT 530
            M+D G  
Sbjct: 491 DMLDEGLA 498


>gi|224137884|ref|XP_002326464.1| predicted protein [Populus trichocarpa]
 gi|222833786|gb|EEE72263.1| predicted protein [Populus trichocarpa]
          Length = 476

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 195/396 (49%), Gaps = 8/396 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF W   +P + H+  +Y++  +L    +   +    I+  K     + VDTF +++R
Sbjct: 79  LRFFIWAGDQPNYRHNLYIYNKACSLFKIKQNPQVILDLIETYKLEKCVVCVDTFKVVLR 138

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD--SLKDKFE 249
                GLA EA+    +M E+   PD  A+++VI  LC K     A+       L D + 
Sbjct: 139 LCKAGGLADEALMVLKKMPEFNIRPDTTAYNVVIRSLCEKGDVDMAKKLMGEMGLIDLY- 197

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD+I Y ++++G+C  G + EA  +F  M + G  PNV  YS ++D +CR G + RA ++
Sbjct: 198 PDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVVAYSALLDGICRFGIVERAFEL 257

Query: 310 FAEMLEV--GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            AEM +   GC PN IT+ ++++   +  RT+  L V   M+  GC  + +T +  I+  
Sbjct: 258 LAEMEKQGEGCCPNVITYTSVIQSFCEQGRTKDALSVLELMEVRGCAPNRVTASAWINGI 317

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C +G+L+D    +  +V  G       ++ +  C+ K+  V  A + + +      +P++
Sbjct: 318 CTNGQLQDVYNFIERIVAGGSVSIGDCYSSLVVCLIKIKKVEEAEKTFRRALSSGMKPDS 377

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEV--EPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  +++++   + K       L +E+E+       +++ Y IL+   C  GH   A +  
Sbjct: 378 LACSMMIREICSEKRVLDGFCLYEEVEKTGCLSSIDIDIYSILLAGLCQQGHSAEAARLA 437

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           R M+E++       V E +++ L+  G  +   ELV
Sbjct: 438 RSMLEKRIPLRAPHV-EKIVEHLKNFGGKELVAELV 472


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 201/381 (52%), Gaps = 6/381 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+ L  + R  D+ + + ++++ R ++  V TF++++    + G   +A      M+ YG
Sbjct: 195 MVALLKQNRSADVEYLYKEMIR-RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE----PDVIVYTNLVRGWCRAGNIS 269
            +P+ ++++ +I   C+     +       LK+  E    P++  +  L+ G+ +  N+ 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            + +VF+EM    + PNV TY+ +I+ LC  G+I  A  +  +M+  G +PN IT+++L+
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K    ++ L +++ +K  G    T  YN LID +CK GK++D   +   M R+G  
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N +   + + G++  A +++ ++ + K  P+ VT++ILM+ + +   +     L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTN-KGLPDLVTFHILMEGYCSRGESRKAAML 492

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEM +  ++P   TY I++  YC  G+   A     +M +E+ L+   + Y ++LQ   
Sbjct: 493 LKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           + G+L+    L+ +M+++G  
Sbjct: 553 QKGKLEDANMLLNEMLEKGLV 573



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 187/424 (44%), Gaps = 23/424 (5%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID-----------------LM 174
           L ++ W+    +   S +L  ++++     +++     F+D                 + 
Sbjct: 85  LRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 144

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
              NV +      +LV  Y           AF R   YG     ++   ++  L ++ R+
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRS 204

Query: 235 SEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           ++ +  + + ++ K +P+V  +  ++   C+ G +++A  V  +MK+ G  PNV +Y+ +
Sbjct: 205 ADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTL 264

Query: 294 IDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           ID  C+    G++ +A  V  EM+E    PN  TFN L+    K       L+V+ +M  
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLD 324

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                + ITYN LI+  C  GK+ +AI + + MV  G  PN  T++ +     K G +  
Sbjct: 325 QDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKE 384

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  M+  +K     P T  YN+L+  +      D    LK+EME   + P+V TY  LI 
Sbjct: 385 ALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             C  G+   A K   ++  +    P    + ++++     G+ +K   L+++M   G  
Sbjct: 445 GLCRNGNIEAAKKLFDQLTNKGL--PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLK 502

Query: 531 ARPL 534
            R L
Sbjct: 503 PRHL 506



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 163/333 (48%), Gaps = 10/333 (3%)

Query: 144 FVHSPDL--YHEMIN----LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           + +SP++  Y+ +I+    L G  + +  A   +  M    V   + TF+IL+  + +  
Sbjct: 252 YGYSPNVVSYNTLIDGYCKLGGNGKMYK-ADAVLKEMVENEVSPNLTTFNILIDGFWKDD 310

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYT 256
               ++  F  M +    P+ I ++ +I+ LC   + +EA    D +     +P++I Y 
Sbjct: 311 NLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYH 370

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           +L+ G+C+ G + EA  +F  +K  G +P    Y+++IDA C+ G+I     +  EM   
Sbjct: 371 SLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P+  T+N L+    +    E   ++++Q+   G   D +T++ L++ +C  G+   A
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKA 489

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQ 435
             +L  M + G  P   T+N++ +   K G++  A  M  +M K+ +   N  +YN+L+Q
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
            ++     +    L  EM E  + PN  TY I+
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 38/416 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM- 209
           YH +IN    +   + A   +  M  + V   V T+++L++ Y +     EA      M 
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
           EE    PD+ A+ ++I   CR  +  +A    D  L+   + ++ +  +L+ G+C+ G I
Sbjct: 324 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 383

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EAE V   M    ++P+ Y+Y+ ++D  CR G  + A ++  +ML+ G EP  +T+N L
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   +    +  LQ+++ M + G   D + Y+ L+D   K    E A  +   ++ +G 
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             +  TFN +   + K+G +  A  ++ KMKDL C P+ +TY  L+  +  + +     K
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 449 LKKEMEENEVE-----------------------------------PNVNTYRILITMYC 473
           +K  ME   +                                    PN+ TY  LI  +C
Sbjct: 564 VKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC 623

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G  + A+    EM E   L     +   ++  L R G++ +   L++KMVD GF
Sbjct: 624 KEGMLDKAFSSYFEMTENG-LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 206/500 (41%), Gaps = 106/500 (21%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           +T   ++   PD Y     L G  R+     A++  D M    +E TV T++ L++   R
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 196 AGLAAEAVHAFNRMEEYGCAPD-----------------------------------KIA 220
            G   +A+  ++ M + G APD                                   +I 
Sbjct: 450 VGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509

Query: 221 FSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV----- 274
           F+ +IS LC+  +  EA+  FD +KD    PD I Y  L+ G+C+A N+ +A +V     
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569

Query: 275 ------------------------------FREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
                                           EM + G+ PN+ TY  +ID  C+ G + 
Sbjct: 570 REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG------------ 352
           +A   + EM E G   N I  + ++    +  R ++   +  +M   G            
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 353 ----------------CEA----DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
                           C+     + I YN  I   CK GK++DA +  + +  KG  P+ 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+  +    S  G+V+ A R+  +M      PN VTYN L+     S++ D   +L  +
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           + +  + PNV TY  LI  YC +G+ + A+K   +MIEE  + P    Y  ++  L + G
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG-ISPSVVTYSALINGLCKHG 868

Query: 513 QLQKHEELVEKMVDRGFTAR 532
            +++  +L+ +M+  G  ++
Sbjct: 869 DIERSMKLLNQMIKAGVDSK 888



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 90/454 (19%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF----IDLMK------------ 175
           L FF +V+ +  F  +   Y +++++  + R +D    +    +DL K            
Sbjct: 86  LGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDEL 145

Query: 176 ---SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
               R    +   F ++++ YV  GL   A++ F+ M + G  P                
Sbjct: 146 VGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIP---------------- 189

Query: 233 RASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
                     SL+           +L+    + G    A  V+++M   GI P+V+  SI
Sbjct: 190 ----------SLRS--------CNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 231

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++A C+ G++  A     +M  +G EPN +T+++L+  +V     E    V   M   G
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 353 CEADTITYNF------------------------------------LIDCHCKDGKLEDA 376
              + +TY                                      LID +C+ GK++DA
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +++L+ M+R G   N    N +     K G+++ A  +  +M D   +P++ +YN L+  
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           +     T     L  +M +  +EP V TY  L+   C +G +++A + I  ++ +  + P
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ-IWHLMMKXGVAP 470

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               Y  +L  L +    +    L + ++ RGFT
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 34/333 (10%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S ++Y+ +I+   K R+       +  M  R +   + T+  L+  + + G+  +A  ++
Sbjct: 576 SIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEA---------QSFF---------------- 241
             M E G + + I  S ++S L R  R  EA           FF                
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 695

Query: 242 --------DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
                   +S K    P+ IVY   + G C+ G + +A R F  + + G  P+ +TY  +
Sbjct: 696 QKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTL 755

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I      G +  A  +  EML  G  PN +T+N L+    K+   ++  ++++++ + G 
Sbjct: 756 IHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL 815

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + +TYN LID +CK G ++ A K+ + M+ +G +P+  T++ +   + K GD+  + +
Sbjct: 816 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMK 875

Query: 414 MYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDM 445
           +  +M     +   + Y  L+Q  F TS   +M
Sbjct: 876 LLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEM 908


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 188/409 (45%), Gaps = 40/409 (9%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A H  D M     +    T+  L+    + G +  A+     M +  C P+ 
Sbjct: 158 GKIGE---ALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNV 214

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           I ++ +I  L + R+ +EA + F  +  K   P+V  Y +++ G C+         +  E
Sbjct: 215 ITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNE 274

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M  + I PNV  ++ ++DALC+ G +T AHDV   M++ G EP+ +T+  LM  H   S 
Sbjct: 275 MVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSE 334

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            ++  +V++ M R GC  + I+Y+ LI+ +CK  +++ A+ +   M ++   PN  T+N 
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNT 394

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +  +G +  A  ++ +M      P+ VTY IL+     ++  D  + + K +E + 
Sbjct: 395 LIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN 454

Query: 458 VEPNVNTYRILITMYCGMGH--------------------WN---------------NAY 482
           + P++ +Y I+I   C +G                     W                 A 
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           K  REM  + C  P    Y ++ +   R  +     +L+++M+ RGF+A
Sbjct: 515 KLFREMNTDGC-SPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSA 562



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 177/392 (45%), Gaps = 37/392 (9%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M S  +   V T +I++  +              ++ + G  PD   F+ +I  LC + +
Sbjct: 100 MDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGK 159

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   FD +  + F+P+ + Y  L+ G C+ GN   A R+ R M     +PNV TY+ 
Sbjct: 160 IGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNT 219

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK--- 349
           +ID L +  Q+  A ++F+EM+  G  PN  T+N+++    K S  + V  + N+M    
Sbjct: 220 IIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK 279

Query: 350 --------------------------------RLGCEADTITYNFLIDCHCKDGKLEDAI 377
                                           + G E D +TY  L+D HC   ++++A 
Sbjct: 280 IMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEAD 339

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           KV ++MVRKGC PN  +++ +     K+  ++ A  ++ +M   +  PN VTYN L+   
Sbjct: 340 KVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                    + L  EM  +   P++ TYRIL+   C   H + A   ++  IE   L P 
Sbjct: 400 CHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKA-IEGSNLAPD 458

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              Y +V+  + R G+L+   +L   +  +G 
Sbjct: 459 IQSYNIVIDGMCRVGELEAAGDLFSSLSSKGL 490



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 167/347 (48%), Gaps = 3/347 (0%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y+ +I+   K  ++      ++ M    +   V  F+ LV    + G+   A  
Sbjct: 246 SPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHD 305

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M + G  PD + ++ ++   C +    EA   FD++  K   P+VI Y+ L+ G+C
Sbjct: 306 VVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYC 365

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   I +A  +F EM    + PN+ TY+ +I  LC  G++  A  +F EM+  G  P+ +
Sbjct: 366 KIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLV 425

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+    K    ++ + +   ++      D  +YN +ID  C+ G+LE A  + +S+
Sbjct: 426 TYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSL 485

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG +P+  T+ ++   +   G +  A +++ +M    C P+  TYN++ + F  +  T
Sbjct: 486 SSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNET 545

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
              ++L +EM       + +T  +++ M    G   +  + + E ++
Sbjct: 546 LSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 59/122 (48%), Gaps = 1/122 (0%)

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A   + +M  ++  P+ V +  ++   A  K    VL L K+M+   +  +V T  I
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I  +C +   +  +  + ++ +    +P ++ +  +++ L   G++ +   L +KMV  
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLG-HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173

Query: 528 GF 529
           GF
Sbjct: 174 GF 175


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 190/395 (48%), Gaps = 37/395 (9%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +DLM ++   +   ++  L+    + G   +A+    +MEE    P+ I +S VI  LC+
Sbjct: 149 LDLM-AKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCK 207

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
            R  ++A   F  +  +    DV+ Y +L+ G C  G   EA R+   M    I P+ YT
Sbjct: 208 DRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT 267

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           ++I++DALC+ G+I  A  VFA M++ G +P+ +T+N LM     ++   +  +++N+M 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G E D + YN LI+ +CK   +++A+ +   +  K   PN +T+N +   + KLG ++
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL-------------------- 449
               +  +M D    P+ VTYNI +  F  SK  +  + L                    
Sbjct: 388 CVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVE 447

Query: 450 ------KKEMEENEVE--------PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                 K ++ E  ++        PNV TY I+I   C    ++ A   + +M +  C  
Sbjct: 448 NFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDC-P 506

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           P +  +E ++  L+   +  K E+L  +M++RG  
Sbjct: 507 PDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 169/345 (48%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
            F  L+   VR G    A+  F+++   G  P     +I+I+  C +   S A S   + 
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTI 116

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           LK  F+P+++ +  L+ G+C  G +S+A     ++   G   + ++Y  +I+ LC+ GQ 
Sbjct: 117 LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQT 176

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +  +M E    PN IT++ ++    K       L++++ +   G   D + YN L
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C  G+  +A ++L  MVR   NP+  TFN++   + K G +  A  ++  M     
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+ VTYN LM+ F  S +     +L   M +  +EP+V  Y +LI  YC +   + A  
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMV 356

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             +E I  K L P  + Y  ++  L + G++   +ELV++M DRG
Sbjct: 357 LFKE-IRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 169/346 (48%), Gaps = 6/346 (1%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   VI+  C  R    +   L  F+ VT+R   V     Y+ +I+    V Q+  A   
Sbjct: 197 TYSTVIDGLCKDRL---IADALRLFSLVTSRGILVDVVA-YNSLIHGCCSVGQWREATRL 252

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           + +M   N+     TF+ILV    + G   EA   F  M + G  PD + ++ ++   C 
Sbjct: 253 LTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCL 312

Query: 231 KRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
               SEA+  F+ + K   EPDV+ Y  L+ G+C+   + EA  +F+E++   + PN+ T
Sbjct: 313 SNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLAT 372

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +ID LC+ G+++   ++  EM + G  P+ +T+N  +    K+   EK + ++ Q+ 
Sbjct: 373 YNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV 432

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G   D   Y+ +++  CK  KL+ A + L  ++  GC PN  T+ ++   + K    +
Sbjct: 433 Q-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFD 491

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
            A  +  KM D  C P+ VT+  ++        TD   KL+ EM E
Sbjct: 492 EAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIE 537



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 6/363 (1%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           LQ+L        RP  +     Y  +I+   K R    A     L+ SR + + V  ++ 
Sbjct: 180 LQLLQKMEEDLVRPNLIT----YSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNS 235

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+      G   EA      M      PD   F+I++  LC++ R  EAQ  F  +  + 
Sbjct: 236 LIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRG 295

Query: 249 E-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           E PD++ Y  L+ G+C + N+SEA  +F  M   G++P+V  Y+++I+  C+   +  A 
Sbjct: 296 EKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAM 355

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +F E+      PN  T+N+L+    K  R   V ++ ++M   G   D +TYN  +D  
Sbjct: 356 VLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAF 415

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK    E AI +   +V +G  P+   +++I     K   +  A      +    C PN 
Sbjct: 416 CKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNV 474

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TY I++       S D  + L  +M++N+  P+  T+  +I         + A K   E
Sbjct: 475 RTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLE 534

Query: 488 MIE 490
           MIE
Sbjct: 535 MIE 537



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 2/211 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K+   D A      ++ +N+   + T++ L+    + G  +     
Sbjct: 333 PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQEL 392

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
            + M + G +PD + ++I +   C+ +   +A S F  +     PD  +Y  +V  +C+ 
Sbjct: 393 VDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKG 452

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             +  AE   + + + G  PNV TY+I+I+ALC+      A  + ++M +  C P+++TF
Sbjct: 453 EKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTF 512

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
             ++    + + T+K  ++  +M   G   D
Sbjct: 513 ETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 1/195 (0%)

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           K    +  L  +N+M R         ++ L+    + G    AI + + +  KG  P+ +
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T  ++  C      ++ A  + G +  +  +PN VT+N L+  F  +      +  + ++
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
                  +  +Y  LI   C  G   +A + +++M EE  ++P    Y  V+  L +   
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKM-EEDLVRPNLITYSTVIDGLCKDRL 210

Query: 514 LQKHEELVEKMVDRG 528
           +     L   +  RG
Sbjct: 211 IADALRLFSLVTSRG 225


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 185/368 (50%), Gaps = 7/368 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +P+L  Y  +I       + DL +  +  +  +   +    F+ L++        ++A+ 
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 205 -AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLVR 260
               RM + GC P+  +++I++  LC + R+ EA      + D      PDV+ YT ++ 
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+ + G++ +A   + EM   GI PNV TYS +I ALC+   + +A +V   M++ G  P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N  T+N+++  +  + + ++ +    +M   G E D +TYN L+D  CK+G+  +A K+ 
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           +SM ++G  P  +T+  + +  +  G +   H +   M      PN   ++IL+  +A  
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D  + +  +M +  + P+  TY  +I + C  G   +A +Y  +MI+E+ L PG+ V
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER-LSPGNIV 446

Query: 501 YEMVLQQL 508
           Y  ++  L
Sbjct: 447 YNSLIHSL 454



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 7/302 (2%)

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG---IQPNVYTY 290
           A +A+  FD L  +     I   N         + + A   +  M  AG   + PN+ TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
            I+I + C  G++         +++ G   ++I F  L++      RT   +  V  +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRCISKLGD 407
           +LGC  +  +YN L+   C + + ++A+++L  M   G  C P+  ++  +     K GD
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A+  Y +M D    PN VTY+ ++     +++ D  +++   M +N V PN  TY  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++  YC  G    A  ++++M  +  ++P    Y  ++  L + G+  +  ++ + M  R
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 528 GF 529
           G 
Sbjct: 334 GL 335



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 1/227 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K +  D A   +  M    V     T++ +V  Y  +G   EA+    +M 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + ++ ++  LC+  R +EA+  FDS+ K   +P++  Y  L++G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E   +   M   GI PN Y +SI+I A  + G++ +A  VF++M + G  P+++T+  ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
            +  K+ R E  ++ + QM         I YN LI   C   K + A
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 3/166 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R ++  + T+  L++ Y   G   E    
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P+   FSI+I    ++ +  +A   F  ++ +   PD + Y  ++   C+
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +G + +A R F +M    + P    Y+ +I +LC   +  +A D F
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYF 467


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 196/393 (49%), Gaps = 7/393 (1%)

Query: 141 RPEFVHS---PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           R + +H    P++    + L+G  R  + D     +D M S ++     T+SIL     R
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIV 254
            G +   +  F    + G        SI+++ LC+  + ++A+   + L      P  ++
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           Y  L+ G+C+  ++  A  +F +MK   I+P+  TY+ +I+ LC+   +T+A D+  EM 
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           + G +P+  TFN L+  +  A + EK   V + M++ G ++D I++  ++   CK+GK+ 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +A+ +L+ M+ K   PNA  +N I     + GD   A  +  KMK+     + VTYN+L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           +    S   D   +L   +    + P+V +Y  +I+  C  G  + A + ++EM  +  +
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM-NKYGI 610

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +P    Y  ++  L  AG++   E L ++M+ +
Sbjct: 611 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 643



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 173/351 (49%), Gaps = 14/351 (3%)

Query: 184 DTFSI--LVRRYVRAGLAAEAVHAFNRM--EEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           DTF+   +V+  V AG    A+    RM   E    PD  ++++VI+ L R  + S+A  
Sbjct: 156 DTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALK 215

Query: 240 FFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
            FD + D    P+ I Y  ++ G  + G++    R+  +M   G +PN+ TY++++  LC
Sbjct: 216 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 275

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           R G++     +  EM      P+  T++ L     +   +  +L ++ +  + G      
Sbjct: 276 RAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY 335

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           T + L++  CKDGK+  A +VL  +V  G  P    +N +     ++ D+ GA  ++ +M
Sbjct: 336 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 419 KDLKCEPNTVTYNILM----QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           K     P+ +TYN L+    ++   +K+ D+V+    EME++ V+P+V T+  LI  Y  
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVM----EMEKSGVDPSVETFNTLIDAYGT 451

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            G     +  + +M ++K +K     +  V++   + G++ +   +++ M+
Sbjct: 452 AGQLEKCFTVLSDM-QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 164/348 (47%), Gaps = 2/348 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           ++++++    R+G  ++A+  F+ M + G  P+ I ++ +I    +           D  
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM 255

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L D  +P+++ Y  L+ G CRAG + E   +  EM    + P+ +TYSI+ D L R G+ 
Sbjct: 256 LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 315

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +FAE L+ G    + T + L+    K  +  K  QV   +   G    T+ YN L
Sbjct: 316 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 375

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+ +C+   L  A  +   M  +   P+  T+N +   + KL  V  A  +  +M+    
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+  T+N L+  + T+   +    +  +M++  ++ +V ++  ++  +C  G    A  
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + +MI  K + P + VY  ++     +G  ++   LVEKM + G +A
Sbjct: 496 ILDDMIY-KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 542



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 151/332 (45%), Gaps = 36/332 (10%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           + V +   T SIL+    + G  A+A      +   G  P  + ++ +I+  C+ R    
Sbjct: 328 KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 387

Query: 237 AQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A   F+ +K +   PD I Y  L+ G C+   +++AE +  EM+ +G+ P+V T++ +ID
Sbjct: 388 AFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLID 447

Query: 296 ALCRCGQITRAHDVFAEMLEVGCE-----------------------------------P 320
           A    GQ+ +   V ++M + G +                                   P
Sbjct: 448 AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAP 507

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N+  +N+++  ++++  TE+   +  +MK  G  A  +TYN L+   C+  ++++A +++
Sbjct: 508 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
            ++  +G  P+  ++N I       GD + A  +  +M      P   TY+ L+   A++
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 627

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
                +  L ++M    VEP+ + Y I++  Y
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 147/310 (47%), Gaps = 1/310 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +IN   +VR    A+   + MKSR++     T++ L+    +  +  +A      M
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           E+ G  P    F+ +I       +  +  +    ++ K  + DVI + ++V+ +C+ G I
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  +  +M    + PN   Y+ +IDA    G   +A  +  +M   G   + +T+N L
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 550

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   ++S+ ++  ++   ++  G   D ++YN +I   C  G  + A+++L  M + G 
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   T++ +   ++  G V+    +Y +M     EP++  Y I++  +   ++   V  
Sbjct: 611 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 449 LKKEMEENEV 458
           LKKEM E  +
Sbjct: 671 LKKEMSEKGI 680



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 92/191 (48%), Gaps = 1/191 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  ++V      ++ ++  Y+ +G   +A     +M+  G +   + +++++ 
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 552

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LCR  +  EA+    +L+++   PDV+ Y  ++   C  G+  +A  + +EM   GI+P
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            + TY  ++ AL   G++     ++ +ML    EP+S  +  ++  +V+     KV  + 
Sbjct: 613 TLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLK 672

Query: 346 NQMKRLGCEAD 356
            +M   G   D
Sbjct: 673 KEMSEKGIAFD 683


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 172/347 (49%), Gaps = 2/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ ++  Y +  +  EA          G  PD++ +  +I+ LC +     A   F+  
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA 280

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + K  +PD++VY +LV+G CR G I  A +V  EM   G  P+++TY+IVI+ LC+ G I
Sbjct: 281 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNI 340

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  V  + +  G  P+  TFN ++  + K  + +  LQ+  +M   G   D ITYN +
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSV 400

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++  CK GK ++  +    M+ KGC PNA T+N++     K+  +  A  +  +M     
Sbjct: 401 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+T+++N L+  F  +   D    L ++++E       +T+ ILI  Y    +   A K
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              EMI  K  KP    Y +++    +A  + +    + +MV +GF 
Sbjct: 521 IFGEMI-SKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFV 566



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 174/364 (47%), Gaps = 1/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A H  D M  R+V   V TF+ ++    + G   E+     ++ + G + +K   +I I 
Sbjct: 99  ARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIR 158

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            LC   R  EA +  +S+     PDV+ Y  L+RG C+   + EA +  R M   G  P+
Sbjct: 159 GLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPD 218

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
            +TY+ +ID  C+   +  A ++  + +  G  P+ +T+ +L+         E+ L+++N
Sbjct: 219 DFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFN 278

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           + +    + D + YN L+   C+ G +  A++V+N MV  GC+P+  T+N++   + K+G
Sbjct: 279 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMG 338

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +++ A  +          P+  T+N ++  +      D  L+L + M    + P+  TY 
Sbjct: 339 NISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYN 398

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++   C  G      +   EMI + C +P +  Y ++++   +  QL++   ++ +M  
Sbjct: 399 SVLNGLCKAGKAKEVNETFEEMILKGC-RPNAITYNILIENFCKINQLEEASGVIVRMSQ 457

Query: 527 RGFT 530
            G  
Sbjct: 458 DGLV 461



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 193/392 (49%), Gaps = 8/392 (2%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y  +IN        + A    +  ++++++  +  ++ LV+   R GL   A+
Sbjct: 250 FVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 309

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
              N M E GC PD   ++IVI+ LC+    S+A     D++   + PDV  +  ++ G+
Sbjct: 310 QVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGY 369

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+   +  A ++   M M GI P+  TY+ V++ LC+ G+    ++ F EM+  GC PN+
Sbjct: 370 CKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 429

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+N L+    K ++ E+   V  +M + G   DTI++N LI   C++G L+ A  +   
Sbjct: 430 ITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQK 489

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +  KG +  A TFN++    S   ++  A +++G+M     +P+  TY +L+     + +
Sbjct: 490 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAAN 549

Query: 443 TDMVLKLKKEMEENEVEPNVNTY-RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
            D       EM      P++ T+ R+L ++   M H  +    I  ++    + P   V 
Sbjct: 550 VDRAYVHLAEMVSKGFVPSMATFGRVLNSL--AMNHRVSEAVAIIHIMVRMGVVP--EVV 605

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           + +L   ++  ++   + LVE+++ +G  + P
Sbjct: 606 DTILSTDKK--EIAAPKILVEELMKKGHISYP 635



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 179/398 (44%), Gaps = 44/398 (11%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M S  V     T ++ ++ +   G    A+     + E GC    +A+  V+  L     
Sbjct: 36  MLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGH 95

Query: 234 ASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
             +A+  FD +  +D F PDV  + N++   C+ G+I E+  +  ++   G+  N +T +
Sbjct: 96  GYDARHLFDEMLRRDVF-PDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCN 154

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           I I  LC  G++  A     E ++    P+ +T+N LMR   K S+ ++  Q   +M   
Sbjct: 155 IWIRGLCEGGRLEEAV-ALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ 213

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           GC  D  TYN +ID +CK   L++A ++L   + KG  P+  T+  +   +   GDV  A
Sbjct: 214 GCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERA 273

Query: 412 HRMY--GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
             ++   + KDLK  P+ V YN L++           L++  EM E+   P++ TY I+I
Sbjct: 274 LELFNEAQAKDLK--PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVI 331

Query: 470 TMYCGMGHWNNAYKYIRE---------------MIEEKC-------------------LK 495
              C MG+ ++A   + +               MI+  C                   + 
Sbjct: 332 NGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIA 391

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           P +  Y  VL  L +AG+ ++  E  E+M+ +G   RP
Sbjct: 392 PDAITYNSVLNGLCKAGKAKEVNETFEEMILKG--CRP 427



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 2/253 (0%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M + G  P    Y+ ++DAL       +AH V+  ML  G  P++ T    ++      R
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
               L++   +   GC+   + Y  ++      G   DA  + + M+R+   P+ +TFN 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   + + GD+  +  +  K+       N  T NI ++        +  + L + M+   
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDA-Y 179

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + P+V TY  L+   C       A +Y+R M+ + C+ P    Y  ++    +   LQ+ 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCI-PDDFTYNTIIDGYCKRDMLQEA 238

Query: 518 EELVEKMVDRGFT 530
            EL++  + +GF 
Sbjct: 239 TELLKDAIFKGFV 251


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 200/422 (47%), Gaps = 40/422 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I    K  +F  A  ++  M +  +E    T++ L+  Y + G+   A   
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
                  G  PD+  +  +I  LC +   + A + F ++L    +P+VI+Y  L++G   
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G I EA ++  EM   G+ P V T++I+++ LC+ G ++ A  +   M+  G  P+  T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+  +    + E  L++ + M   G + D  TYN L++  CK  K ED ++   +MV
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523

Query: 385 RKGCNPNASTFNMIFRCISKL-----------------------------------GDVN 409
            KGC PN  TFN++   + +                                    GD++
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 410 GAHRMYGKMKD-LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           GA+ ++ KM++  K   +T TYNI++  F    +  M  KL +EM +  + P+  TYR++
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  +C  G+ N  YK++ EM+E   + P  +    V+  L    ++ +   ++ +MV +G
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFI-PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702

Query: 529 FT 530
             
Sbjct: 703 LV 704



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 173/362 (47%), Gaps = 2/362 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            +     M +  V + + TF+ L+R   + G   E     +++ + G  P+   +++ I 
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259

Query: 227 ILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A      L ++  +PDVI Y NL+ G C+     EAE    +M   G++P
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           + YTY+ +I   C+ G +  A  +  + +  G  P+  T+ +L+        T + L ++
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N+    G + + I YN LI      G + +A ++ N M  KG  P   TFN++   + K+
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V+ A  +   M      P+  T+NIL+  ++T    +  L++   M +N V+P+V TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+   C    + +  +  + M+E+ C  P    + ++L+ L R  +L +   L+E+M 
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGC-APNLFTFNILLESLCRYRKLDEALGLLEEMK 558

Query: 526 DR 527
           ++
Sbjct: 559 NK 560



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 182/403 (45%), Gaps = 3/403 (0%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD-LAWHFIDLMKSRNVEITVDTFS 187
           ++ L  FN +     F H+   Y  +I   G   +F+ +    +D+ ++    +    + 
Sbjct: 21  MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYV 80

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
             ++ Y R G   EAV+ F RM+ Y C P   +++ ++S+L       +A   +  ++D+
Sbjct: 81  GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PDV  +T  ++ +C+      A R+   M   G + NV  Y  V+            
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           +++F +ML  G      TFN L+RV  K    ++  ++ +++ + G   +  TYN  I  
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+L+ A++++  ++ +G  P+  T+N +   + K      A    GKM +   EP+
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           + TYN L+  +       +  ++  +   N   P+  TYR LI   C  G  N A     
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           E +  K +KP   +Y  +++ L   G + +  +L  +M ++G 
Sbjct: 381 EAL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 146 HSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + PD++   I + G   Q  +  A   +D+M    V+  V T++ L+    +     + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             +  M E GCAP+   F+I++  LCR R+  EA    + +K+K   PD + +  L+ G+
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576

Query: 263 CRAGNISEAERVFREMKMA-GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           C+ G++  A  +FR+M+ A  +  +  TY+I+I A      +T A  +F EM++    P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  ++    K        +   +M   G      T   +I+C C + ++ +A  +++
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696

Query: 382 SMVRKGCNPNA 392
            MV+KG  P A
Sbjct: 697 RMVQKGLVPEA 707


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 187/377 (49%), Gaps = 5/377 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I LA K    + A +    M +  ++ ++ TF+ L+    + G   EA    +++ +Y 
Sbjct: 212 LIQLA-KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 270

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
            +PD   ++ +I   CR R    A   FD + K+  +P+ + Y+ L+ G C  G + EA 
Sbjct: 271 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 330

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +  EM   GI+P VYTY++ I ALC       A ++ A M + GC PN  T+  L+   
Sbjct: 331 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 390

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +  + E  + +Y++M + G   +T+TYN LI+  C  G+   A+K+ + M   G   N 
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N I + +   GD+  A  ++ KM  +   P  VTYN L+  + T  + +   +L   
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRA 511
           M+EN  EP+  TY  L++ +   G   +A  Y +EM+E  C L P    Y  ++    + 
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE--CGLNPNPVSYTTLIDGHSKD 568

Query: 512 GQLQKHEELVEKMVDRG 528
           G++     L+E+M + G
Sbjct: 569 GKVDIALSLLERMEEMG 585



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 180/381 (47%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      + D A   ++ M  + +E TV T+++ +          EA+    RM+
Sbjct: 313 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 372

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC P+   ++ +IS L R  +   A   +   LK+   P+ + Y  L+   C  G  S
Sbjct: 373 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 432

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++F  M+  G   N  TY+ +I  LC  G I +A  +F +ML++G  P  +T+N L+
Sbjct: 433 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 492

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             ++         ++ + MK  GCE D  TYN L+    K GKLE A      MV  G N
Sbjct: 493 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 552

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  ++  +    SK G V+ A  +  +M+++ C PN  +YN ++   +         K+
Sbjct: 553 PNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 612

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M E  + PNV TY  LI   C  G    A+K   +M + KCL P    Y  ++  L 
Sbjct: 613 CDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL-PNLYTYSSLIYGLC 671

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           + G+  + E L+++M  +G  
Sbjct: 672 QEGKADEAEILLKEMERKGLA 692



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 174/361 (48%), Gaps = 2/361 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   ++ + ++A      M    +     T++ L+      G  + A+  F+ ME
Sbjct: 383 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 442

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
            +G   +   ++ +I  LC      +A   F+  LK    P V+ Y  L+ G+   GN++
Sbjct: 443 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 502

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+   MK  G +P+ +TY+ ++    + G++  A   F EM+E G  PN +++  L+
Sbjct: 503 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLI 562

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H K  + +  L +  +M+ +GC  +  +YN +I+   K+ +  +A K+ + M  +G  
Sbjct: 563 DGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLL 622

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+  +   + + G    A +++  M+  KC PN  TY+ L+         D    L
Sbjct: 623 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEIL 682

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEME   + P+  T+  LI  +  +G  ++A+  +R M++  C KP    Y ++L+ L+
Sbjct: 683 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGC-KPNYRTYSVLLKGLQ 741

Query: 510 R 510
           +
Sbjct: 742 K 742



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 181/405 (44%), Gaps = 26/405 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+++   K  + + A  +   M    +     +++ L+  + + G    A+    RME
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+  +++ VI+ L ++ R SEA+   D + ++   P+VI YT L+ G CR G   
Sbjct: 583 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQ 642

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++F +M+     PN+YTYS +I  LC+ G+   A  +  EM   G  P+ +TF +L+
Sbjct: 643 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLI 702

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI-----DC------------------ 366
              V   R +    +  +M  +GC+ +  TY+ L+     +C                  
Sbjct: 703 DGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFS 762

Query: 367 -HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            H KD   E    +L  M   GC P   T++ +   + + G    A ++   MK+    P
Sbjct: 763 PHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 822

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +   Y  L+     +   D  LK+   +E    + +++ YR LI   C  G    A    
Sbjct: 823 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALF 882

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             M+E++       V+ +++  L + G+L    +L+  M  + FT
Sbjct: 883 DNMLEKE-WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 926



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 155/343 (45%), Gaps = 25/343 (7%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K  +F  A    D M  + +   V T++ L+    R G    A   F+ ME
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +  C P+   +S +I  LC++ +A EA+     ++ K   PD + +T+L+ G+   G I 
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCR-C----GQITRAHD---------------- 308
            A  + R M   G +PN  TYS+++  L + C     ++   H+                
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEI 772

Query: 309 ---VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
              + A M E+GCEP   T++ L+    +  R  +  Q+   MK  G   D   Y  L+ 
Sbjct: 773 VSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 832

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            HCK+ +++ A+K+ +S+  KG   + S +  +   + K G V  A  ++  M + +   
Sbjct: 833 AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNA 892

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + + + +L+         D+ +KL   ME     PN+ TY IL
Sbjct: 893 DEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 6/272 (2%)

Query: 263 CRAGNISEAERV---FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           CR  N  E  RV     E+   G   ++Y+ + ++  L +   +  A +++ +ML  G +
Sbjct: 180 CR--NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQ 237

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +TFN L+ +  K  +  +   + +Q+ +     D  TY  LI  HC++  L+ A  V
Sbjct: 238 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 297

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + MV++GC+PN+ T++ +   +   G V+ A  M  +M +   EP   TY + +     
Sbjct: 298 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 357

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +  +  ++L   M++    PNV TY  LI+    +G    A     +M++E  L P + 
Sbjct: 358 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG-LVPNTV 416

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            Y  ++ +L   G+     ++   M   G  A
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLA 448



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 25/263 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS------ILCRKRRASEAQ 238
           TF+ L+  +V  G    A     RM + GC P+   +S+++       +L  ++ A + +
Sbjct: 697 TFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHE 756

Query: 239 ---SFFDSLKD----------------KFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
              SF    KD                  EP +  Y+ LV G CR G   EAE++ ++MK
Sbjct: 757 AVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 816

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G  P+   Y  ++ A C+  ++  A  +F  +   G + +   +  L+    KA + E
Sbjct: 817 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 876

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           +   +++ M      AD I +  L+D   K+G+L+  +K+L+ M  K   PN  T+ ++ 
Sbjct: 877 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILG 936

Query: 400 RCISKLGDVNGAHRMYGKMKDLK 422
           R +S++G    +  +  K+K LK
Sbjct: 937 RELSRIGKSIESEPLADKLKVLK 959


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 179/365 (49%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M    V++    ++ L+  Y R             ME  G  P    ++I++ 
Sbjct: 162 ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L   R  ++ ++ F+ +K K    DV  Y++++  +CRAGN+  A  VF E    GI+P
Sbjct: 222 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 281

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N +TY  +I+  C+ GQ+  A  +  +M   G   N I FN ++  + + +  +K L++ 
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M+++G E D  TYN L     +  ++++A  +L  M+ KG  PN  ++  +       
Sbjct: 342 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNE 401

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A R++ +M     EP+ VTYN++M  +    S     + KKEME+  + P++ +Y
Sbjct: 402 GDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSY 461

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+  +C  G  + A +   EM +++  KP    Y  ++  L + G+ ++  +L + M+
Sbjct: 462 AALVHGHCVNGKVDVALRLFEEM-KQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNML 520

Query: 526 DRGFT 530
             G T
Sbjct: 521 GDGLT 525



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 171/361 (47%), Gaps = 6/361 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   + +  D     + +M++  +E TV T++ILV     A    +    F  M+
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240

Query: 211 EYGCAPDKIAFSIVISILCRK---RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN 267
               + D   +S VI+  CR    RRASE   F + + +  EP+   Y  L+ G+C+ G 
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNVRRASEV--FDECVGNGIEPNEHTYGALINGFCKIGQ 298

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +  AE +  +M++ G+  N   ++ +ID  CR   + +A ++   M ++G E +  T+N 
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L     +A+R ++   +   M   G   + ++Y  LI  HC +G + +A ++   M   G
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T+N++     K G +  A R   +M+     P+  +Y  L+     +   D+ L
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L +EM++   +PN+  Y  LI+     G    A++    M+ +  L P  ++Y  ++  
Sbjct: 479 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG-LTPDDALYSALVGS 537

Query: 508 L 508
           L
Sbjct: 538 L 538



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 136/302 (45%), Gaps = 11/302 (3%)

Query: 150 LYHEMINL---AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
            Y  +IN    AG VR+   A    D      +E    T+  L+  + + G    A    
Sbjct: 250 FYSSVINAYCRAGNVRR---ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLV 306

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKR---RASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
             M+  G   ++I F+ +I   CRK    +A E +   + +    E DV  Y  L  G  
Sbjct: 307 TDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMG--IELDVYTYNTLACGLR 364

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RA  + EA+ + R M   G++PN  +Y+ +I   C  G +  A  +F EM   G EP+ +
Sbjct: 365 RANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLV 424

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N +M  ++K     +  +   +M++ G   D  +Y  L+  HC +GK++ A+++   M
Sbjct: 425 TYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEM 484

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            ++G  PN   +  +   ++K G    A ++Y  M      P+   Y+ L+    T K  
Sbjct: 485 KQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQ 544

Query: 444 DM 445
           ++
Sbjct: 545 NV 546


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 186/373 (49%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   A HF D + ++  ++   +++ L+    + G    A+    +++     P
Sbjct: 141 LKGQVKK---ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKP 197

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           +   +S +I  LC+ +  SEA   F  +  K    DV+ Y+ L+ G+C  G + EA  + 
Sbjct: 198 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLL 257

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I PNVYTY+I++DALC+ G++  A  V A ML+   +P+ IT++ LM  +   
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +K   V+N M  +G   D  TY  LI+  CK+  +++A+ +   M +K   P   T+
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           + +   + K G +     +  +M+D     + +TY+ L+     +   D  + L  +M++
Sbjct: 378 SSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
            E+ PN+ T+ IL+   C  G   +A +  ++++  K        Y +++    + G L+
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL-TKGYHLNVYTYNVMINGHCKQGLLE 496

Query: 516 KHEELVEKMVDRG 528
           +   ++ KM D G
Sbjct: 497 EALTMLSKMEDNG 509



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 169/347 (48%), Gaps = 1/347 (0%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           ++Y  +I+   K +    A+     M  + +   V T+S L+  +   G   EA+   N 
Sbjct: 200 EMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNE 259

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGN 267
           M      P+   ++I++  LC++ +  EA+S     LK   +PDVI Y+ L+ G+     
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A+ VF  M + G+ P+V+TY+I+I+  C+   +  A ++F EM +    P  +T+++
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K+ R   V  + ++M+  G  AD ITY+ LID  CK+G L+ AI + N M  + 
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN  TF ++   + K G +  A  ++  +       N  TYN+++         +  L
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
            +  +ME+N   PN  T+  +I         + A K +R+MI    L
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 185/386 (47%), Gaps = 6/386 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H+P +  ++++++   K++ +  A      ++ + ++  + T +IL+  +   G      
Sbjct: 55  HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
               ++ + G  PD +  + +I  LC K +  +A  F D  L   F+ + + Y  L+ G 
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ G+   A ++ R++     +PNV  YS +IDALC+   ++ A+ +F+EM   G   + 
Sbjct: 175 CKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T++ L+       + ++ + + N+M       +  TYN L+D  CK+GK+++A  VL  
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++    P+  T++ +      + +V  A  ++  M  +   P+  TY IL+  F  +K 
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-Y 501
            D  L L KEM +  + P + TY  LI   C  G     +  I EM +    +P   + Y
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG--QPADVITY 412

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDR 527
             ++  L + G L +   L  KM D+
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQ 438



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 135/281 (48%), Gaps = 1/281 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +I +  ++  + +  + S A  +   +++ GIQP++ T +I+I+  C  GQIT    V
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A++L+ G  P+++T N L++      + +K L  ++++   G + + ++Y  LI+  CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G    AIK+L  +  +   PN   ++ I   + K   V+ A+ ++ +M       + VT
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+ L+  F         + L  EM    + PNV TY IL+   C  G    A K +  ++
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA-KSVLAVM 295

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + C+KP    Y  ++       +++K + +   M   G T
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 186/373 (49%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L GKVR+   A HF D + ++   +   ++  L+    + G    A+    +++     P
Sbjct: 146 LNGKVRE---ALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQP 202

Query: 217 DKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + ++ +I  LC+ +    A     + +  +  PDV+ YT L+ G    G + EA  +F
Sbjct: 203 NVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLF 262

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M +  I+P+VYT++I++D LC+ G++ +A +V A M++ G + N +T+N+LM  +   
Sbjct: 263 NQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLV 322

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            +  K   V+N M R G   D  +Y+ +I+  CK   +++A+ +   M  K   PN  T+
Sbjct: 323 KQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTY 382

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + K G ++ A  +  +M +     + +TY+ L+     +   D  + L  ++++
Sbjct: 383 NSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKD 442

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             ++PN+ TY IL+   C  G   +A    ++++  K       +Y +++  L + G   
Sbjct: 443 QGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL-IKGYHLDVKMYNVMVNGLCKEGLFD 501

Query: 516 KHEELVEKMVDRG 528
           +   LV KM D G
Sbjct: 502 EALSLVSKMEDNG 514



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 4/380 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++++++   K+  F  A  F   M+ + ++  + TF+IL+  +   G    A     ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD +  + +I  LC   +  EA  F D +  K F  D + Y  L+ G C+ G   
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A +V R++    +QPNV  Y+ +ID+LC+   +  A D+ +EM+     P+ +T+  L+
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              +   R ++ + ++NQM     + D  T+N L+D  CK+G+++ A  VL  M+++G +
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            N  T+N +      +   N A  ++  M      P+  +Y+I++     +K  D  + L
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQL 508
            KEM    + PN  TY  LI      G  ++A+  + EM      +P   + Y  +L  L
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG--QPADVITYSSLLDAL 424

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            +  Q+ K   L+ K+ D+G
Sbjct: 425 CKNHQVDKAITLITKIKDQG 444



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 16/376 (4%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDL---MKSRNVEITVDT 185
           LQVL   + +  +P  V    +Y+ +I+   K +   L  H  DL   M  + +   V T
Sbjct: 189 LQVLRKIDGLLVQPNVV----MYNTIIDSLCKDK---LVIHASDLCSEMIVKRIFPDVVT 241

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           ++ L+   +  G   EAV  FN+M      PD   F+I++  LC++    +A++    + 
Sbjct: 242 YTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMI 301

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K   + +++ Y +L+ G+      ++A  VF  M   G+ P+V +YSI+I+ LC+   + 
Sbjct: 302 KQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVD 361

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A ++F EM      PN++T+N+L+   +K  R      + N+M   G  AD ITY+ L+
Sbjct: 362 EAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLL 421

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  CK+ +++ AI ++  +  +G  PN  T+ ++   + K G +  A  +Y  +      
Sbjct: 422 DALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYH 481

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            +   YN+++         D  L L  +ME+N   P+  TY  L+         + A K 
Sbjct: 482 LDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKL 541

Query: 485 IREMIEEKCLKPGSSV 500
           +REMI +     GS+V
Sbjct: 542 LREMIVQ-----GSAV 552



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 155/365 (42%), Gaps = 38/365 (10%)

Query: 201 EAVHAFNRMEEYGCAPDKI-AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
           +AV +FN +         I  F+ ++S L +      A SF   ++ K  +PD+  +  L
Sbjct: 46  DAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNIL 105

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +  +C  G+++ A  V  ++   G  P+  T + +I  LC  G++  A     +++  G 
Sbjct: 106 INCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF 165

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD-------- 370
             + +++  L+    K   T   LQV  ++  L  + + + YN +ID  CKD        
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASD 225

Query: 371 ---------------------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
                                      G+L++A+ + N M+ K   P+  TFN++   + 
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLC 285

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G++  A  +   M     + N VTYN LM  +   K  +    +   M    V P+V 
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQ 345

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           +Y I+I   C     + A    +EM   K + P +  Y  ++  L + G++    +LV +
Sbjct: 346 SYSIMINGLCKTKMVDEAVNLFKEM-HSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNE 404

Query: 524 MVDRG 528
           M +RG
Sbjct: 405 MHNRG 409


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 172/349 (49%), Gaps = 4/349 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ ++  +   G    A+     M E G  AP++  +  VIS  C+  R  EA   FD 
Sbjct: 187 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 246

Query: 244 L--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +  K + +P+ ++Y  L+ G+C  G +  A      M   G+   V TY++++ AL   G
Sbjct: 247 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 306

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A+++  EM   G   +  T+N L+  H K    +K L+++  M R G  A  +TY 
Sbjct: 307 RGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 366

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI    K G++++  K+ +  VR+G  P+   +N +    S  G+++ A  + G+M+  
Sbjct: 367 SLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 426

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P+ VTYN LM+        D   KL  EM +  ++P++ TY  LI+ Y   G   +A
Sbjct: 427 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDA 486

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +   EM+  K   P    Y  ++Q L + GQ    E +V++MV+ G T
Sbjct: 487 LRIRNEMM-NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 534



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 2/321 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +I+   KV + D A    D M ++  V+     ++ L+  Y   G    A+   +RM
Sbjct: 224 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 283

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E G A     +++++  L    R +EA    + +  K    DV  Y  L+ G C+ GN+
Sbjct: 284 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNV 343

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A  +F  M   G++  V TY+ +I AL + GQ+     +F E +  G  P+ + +N L
Sbjct: 344 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 403

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  H  +   ++  ++  +M++     D +TYN L+   C  G++++A K+++ M ++G 
Sbjct: 404 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 463

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +    S  GDV  A R+  +M +    P  +TYN L+Q    +   D    
Sbjct: 464 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 523

Query: 449 LKKEMEENEVEPNVNTYRILI 469
           + KEM EN + P+ +TY  LI
Sbjct: 524 MVKEMVENGITPDDSTYISLI 544



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 154/311 (49%), Gaps = 1/311 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + +  F+ +  + E      +Y+ +I       + D A  + D M  R V +TV T+++L
Sbjct: 239 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 298

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           V      G   EA      M   G A D   ++I+I+  C++    +A   F+++  +  
Sbjct: 299 VHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 358

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
              V+ YT+L+    + G + E +++F E    GI+P++  Y+ +I++    G I RA +
Sbjct: 359 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 418

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EM +    P+ +T+N LMR      R ++  ++ ++M + G + D +TYN LI  + 
Sbjct: 419 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYS 478

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G ++DA+++ N M+ KG NP   T+N + + + K G  + A  M  +M +    P+  
Sbjct: 479 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 538

Query: 429 TYNILMQMFAT 439
           TY  L++   T
Sbjct: 539 TYISLIEGLTT 549



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 145/327 (44%), Gaps = 42/327 (12%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D  + +       +  ++R  C AG  + A  + R+M     +PN  TY+ VI   C 
Sbjct: 142 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCS 197

Query: 300 CGQITRAHDVFAEMLE-VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADT 357
            G++  A D+  EM E  G  PN  T+  ++    K  R ++ ++V+++M   G  + + 
Sbjct: 198 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 257

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + YN LI  +C  GKL+ A+   + MV +G     +T+N++   +   G    A+ +  +
Sbjct: 258 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 317

Query: 418 MKDLKCEPNTVTYNIL-------------MQMF------------ATSKSTDMVLKLKKE 452
           M       +  TYNIL             +++F             T  S    L  K +
Sbjct: 318 MGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 377

Query: 453 MEENE----------VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           ++E +          + P++  Y  LI  +   G+ + A++ + EM E+K + P    Y 
Sbjct: 378 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYN 436

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +++ L   G++ +  +L+++M  RG 
Sbjct: 437 TLMRGLCLLGRVDEARKLIDEMTKRGI 463



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 7/228 (3%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +FA+M  +     + TFN ++R    A +  + L++  QM R     + +TYN +I 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 366 CHCKDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKC 423
             C  G+++ A+ ++  M  R G  PN  T+  +     K+G V+ A +++ +M    + 
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P  V YN L+  +      D  L  +  M E  V   V TY +L+      G    AY+
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + EM   K L      Y +++    + G ++K  E+ E M  RG  A
Sbjct: 314 LVEEM-GGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 360


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 186/382 (48%), Gaps = 5/382 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           SPD+  ++ MI       + DLA   F +L+K  N + T+ T++IL+  Y+  G   EA+
Sbjct: 76  SPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEAL 135

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
              + M   G  PD   ++++   LC++ +   A  F  +L  +  +PDVI Y  L+R  
Sbjct: 136 KLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRAL 195

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
              G   E E+   E+   G +PNV TYSI+I +LCR G+I  + ++   M E G  P++
Sbjct: 196 LNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDA 255

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             ++ L+    +  + +  ++  + M   G   D + YN ++   CK+G  + A+++   
Sbjct: 256 YCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGK 315

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +   GC PN S++N +   +   GD   A  M  +M     +P+ +TYN L+        
Sbjct: 316 LDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGM 375

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  + L  +M     +PN+ +Y+ ++   C     ++A + +  MIE  C +P  + Y 
Sbjct: 376 VDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGC-QPNETTYT 434

Query: 503 MVLQQLRRAGQLQKHEELVEKM 524
           ++++ +  +G   +  EL   +
Sbjct: 435 LLIEGIGFSGSRTQAMELANSL 456



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 186/385 (48%), Gaps = 5/385 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+   K  + + A   +D MK +     V T +I++  +   G    A+  
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 206 FNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
           F  + ++  C P  I ++I+I     +    EA    D +  +  EPD   Y  + RG C
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLC 161

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G +  A    R +   G +P+V TY+I++ AL   G+        +E+   GCEPN +
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T++ L+    +  + E+ + +   MK  G   D   Y+ LI   C++GKL+ AI+ L+ M
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +  G  P+   +N I   + K G+ + A  ++GK+ ++ C PN  +YN ++    +S   
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              L +  +M    ++P+V TY  LI+  C  G  + A   + +M+  +  +P    Y+ 
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGR-FQPNIVSYKT 400

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           VL  L +A ++    E++  M++ G
Sbjct: 401 VLLGLCKAHRIDDAIEVLAAMIENG 425



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 2/314 (0%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           PD I  + +I      R   +A      L+   +PDV  Y  ++ G+C+A  I  A+ V 
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVL 67

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-EVGCEPNSITFNNLMRVHVK 334
             MK  G  P+V T++I+I   C  G+I  A  VF E+L +  C+P  IT+  L+  ++ 
Sbjct: 68  DRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYIL 127

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
               ++ L++ ++M   G E DT TYN +    CK+GK++ A + + ++  +GC P+  T
Sbjct: 128 EGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVIT 187

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N++ R +   G  +   +   ++    CEPN VTY+IL+         +  + L K M+
Sbjct: 188 YNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMK 247

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           E  + P+   Y  LI  +C  G  + A +++  MI +  L P    Y  ++  L + G  
Sbjct: 248 EKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFL-PDIVNYNTIMAALCKNGNG 306

Query: 515 QKHEELVEKMVDRG 528
               E+  K+ + G
Sbjct: 307 DHAVEIFGKLDEVG 320



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 148/283 (52%), Gaps = 3/283 (1%)

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           ++PDVI+ T L++G+  + NI +A RV   ++  G +P+V+ Y+ VI   C+  +I  A 
Sbjct: 6   YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAK 64

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ-MKRLGCEADTITYNFLIDC 366
            V   M   G  P+ +T N ++       + +  L+V+ + +K   C+   ITY  LI+ 
Sbjct: 65  TVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEA 124

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           +  +G +++A+K+L+ M+ +G  P+  T+N+I R + K G V+ A      +    C+P+
Sbjct: 125 YILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPD 184

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            +TYNIL++        D   K   E+     EPNV TY ILI+  C  G    +   ++
Sbjct: 185 VITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVK 244

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            M +EK L P +  Y+ ++    R G+L    E ++ M+  GF
Sbjct: 245 VM-KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGF 286


>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
 gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 179/377 (47%), Gaps = 3/377 (0%)

Query: 155 INLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           + + G+  Q+ +A   +D +  +   + V  ++ ++  Y R G   +A+  F RM+E G 
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241

Query: 215 APDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           +P  + +++++ +  +  R+  +     D ++ K  + D    + ++    R G + EA+
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
             F E+K  G +P   TY+ ++    + G  T A  V  EM E  C  +S+T+N L+  +
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           V+A  +++   V   M + G   + ITY  +ID + K GK ++A+K+  SM   GC PN 
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 421

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N +   + K    N   +M   MK   C PN  T+N ++ +         V ++ +E
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M+    EP+ +T+  LI+ Y   G   +A K   EM          + Y  +L  L R G
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG-FNACVTTYNALLNALARKG 540

Query: 513 QLQKHEELVEKMVDRGF 529
             +  E ++  M  +GF
Sbjct: 541 DWRSGENVISDMKSKGF 557



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 175/393 (44%), Gaps = 35/393 (8%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F   +KS   E    T++ L++ + +AG+  EA+     MEE  C  D + ++ +++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              R   + EA    + +  K   P+ I YT ++  + +AG   EA ++F  MK AG  P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  TY+ V+  L +  +      +  +M   GC PN  T+N ++ +       + V +V+
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +MK  G E D  T+N LI  + + G   DA K+   M R G N   +T+N +   +++ 
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD      +   MK    +P   +Y++++Q +A   +   + +++  ++E ++ P+    
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLL 599

Query: 466 RILI----------------TMYCGMGH---------------WNNAY---KYIREMIEE 491
           R L+                T++   G+                NN Y   + I E I E
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             L P    Y  ++    R G+  K EE+++ +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 41/420 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++ + GK   +  A   +  M+  +      T++ LV  YVRAG + EA      M 
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ I ++ VI    +  +  EA   F S+K+    P+   Y  ++    +    +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALC-RCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           E  ++  +MK  G  PN  T++ ++ ALC   G     + VF EM   G EP+  TFN L
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  + +        ++Y +M R G  A   TYN L++   + G       V++ M  KG 
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKD-----------------LKC-------- 423
            P  ++++++ +C +K G+  G  R+  ++K+                  KC        
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617

Query: 424 ----------EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
                     +P+ V +N ++ +F  +   D    + + + E+ + P++ TY  L+ MY 
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
             G    A + I + +E+  LKP    Y  V++   R G +Q+   ++ +M +RG   RP
Sbjct: 678 RRGECWKA-EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI--RP 734



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/445 (20%), Positives = 185/445 (41%), Gaps = 72/445 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E++    +      A   I++M  + V     T++ ++  Y +AG   EA+  F  M+
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-----------------------DK 247
           E GC P+   ++ V+S+L +K R++E       +K                       DK
Sbjct: 414 EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDK 473

Query: 248 F-------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           F             EPD   +  L+  + R G+  +A +++ EM  AG    V TY+ ++
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK----- 349
           +AL R G      +V ++M   G +P   +++ +++ + K      + ++ N++K     
Sbjct: 534 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIF 593

Query: 350 ------------------------------RLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                                         + G + D + +N ++    ++   + A  +
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L S+   G +P+  T+N +     + G+   A  +   ++  + +P+ V+YN +++ F  
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                  +++  EM E  + P + TY   ++ Y  MG +      I  M +  C +P   
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC-RPNEL 772

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
            ++MV+    RAG+  +  + V K+
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDFVSKI 797



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/273 (20%), Positives = 130/273 (47%), Gaps = 7/273 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG--LAAEAVHAFNR 208
           Y+ ++N   +   +    + I  MKS+  + T  ++S++++ Y + G  L  E +   NR
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE--NR 586

Query: 209 MEEYGCAPDKIAFSIVI--SILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
           ++E    P  +    ++  +  CR    SE ++F    K  ++PD++++ +++  + R  
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSE-RAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              +AE +   ++  G+ P++ TY+ ++D   R G+  +A ++   + +   +P+ +++N
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +++   +    ++ +++ ++M   G      TYN  +  +   G   +   V+  M + 
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
            C PN  TF M+     + G  + A     K+K
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 3/171 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + PD+  ++ M+++  +   +D A   ++ ++   +   + T++ L+  YVR G   +A 
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                +E+    PD ++++ VI   CR+    EA      + ++   P +  Y   V G+
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
              G  +E E V   M     +PN  T+ +V+D  CR G+ + A D  +++
Sbjct: 747 TAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 200/423 (47%), Gaps = 11/423 (2%)

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
           VR V++   GV         + FF W   +  + H    Y  +I+    V Q+   W  I
Sbjct: 93  VREVMKTDVGVN------VKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMI 146

Query: 172 -DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
            ++++S    +T    S ++R    A +  +A+  F +++   C P   A++ +I +L  
Sbjct: 147 QEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIH 206

Query: 231 KRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + +  +    ++ + ++   +PD + Y+ L+  +C+ G    A R+  EMK  G+QP   
Sbjct: 207 EGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAK 266

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+++I    +   +  A  +F EM  + C P+  T+  L+R   KA R ++    Y++M
Sbjct: 267 IYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEM 326

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI-SKLGD 407
           +R GC+ DT+  N +I+   K G+L+D +K+   M    C PN  T+N I + +      
Sbjct: 327 QREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSR 386

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V+     + +MK     P+  TY+IL+  F  +   +  + L +EM+E    P    Y  
Sbjct: 387 VSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCS 446

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI        ++ A +  +E ++E C    + VY ++++ L +AG+L     L ++M   
Sbjct: 447 LIDALGKAKRYDLACELFQE-LKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKL 505

Query: 528 GFT 530
           G T
Sbjct: 506 GCT 508



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 177/382 (46%), Gaps = 38/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S L+  + + G    A+   N M+E G  P    ++++IS+  +      A S F+ +
Sbjct: 232 TYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM 291

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +  +  PDV  YT L+RG  +AG I EA   + EM+  G +P+    + +I+ L + G++
Sbjct: 292 RYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRL 351

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTITYNF 362
                +F EM    C PN +T+N +++   ++ SR  +V   + +MK  G      TY+ 
Sbjct: 352 DDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSI 411

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNP-------------------------------- 390
           LID  CK  ++E A+ +L  M  KG  P                                
Sbjct: 412 LIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471

Query: 391 ---NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              +A  + ++ + + K G ++ A  ++ +M  L C PN   YN LM   A +   D  L
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEAL 531

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
              ++M+E+   P++N+Y I++      G  + A + +  M +   +KP +  Y  VL  
Sbjct: 532 TTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNM-KNSTIKPDAVSYNTVLSA 590

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           L  AG  ++  EL+++M   GF
Sbjct: 591 LSHAGMFEEAAELMKEMNALGF 612



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 187/395 (47%), Gaps = 8/395 (2%)

Query: 98  FSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI 155
           ++++S      P TV +  +I   C +      +++L+       +P    +  +Y  +I
Sbjct: 217 YNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQP----TAKIYTMII 272

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           +L  K+     A    + M+       V T++ L+R   +AG   EA H ++ M+  GC 
Sbjct: 273 SLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCK 332

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRA-GNISEAER 273
           PD +  + +I+ L +  R  +    F+ +      P+V+ Y  +++    +   +SE   
Sbjct: 333 PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFS 392

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
            F  MK +GI P+ +TYSI+ID  C+  +I +A  +  EM E G  P    + +L+    
Sbjct: 393 WFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 452

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           KA R +   +++ ++K     +    Y  +I    K G+L+DAI + + M + GC PN  
Sbjct: 453 KAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            +N +   +++   ++ A     KM++  C P+  +YNI++   A +      +++   M
Sbjct: 513 AYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNM 572

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           + + ++P+  +Y  +++     G +  A + ++EM
Sbjct: 573 KNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 6/323 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y E+I   GK  + D A+HF   M+    +      + ++    +AG   + +  
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKL 357

Query: 206 FNRMEEYGCAPDKIAFSIVISILCR-KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
           F  M    C P+ + ++ +I  L   K R SE  S+F+ +K     P    Y+ L+ G+C
Sbjct: 358 FEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFC 417

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   I +A  +  EM   G  P    Y  +IDAL +  +   A ++F E+ E  C  +S 
Sbjct: 418 KTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE-NCGSSSA 476

Query: 324 TFNNLMRVHV-KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
               +M  H+ KA R +  + ++++M +LGC  +   YN L+    +   L++A+  +  
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRK 536

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC P+ +++N+I   ++K G  + A  M   MK+   +P+ V+YN ++   + +  
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596

Query: 443 TDMVLKLKKEMEENEVEPNVNTY 465
            +   +L KEM     E ++ TY
Sbjct: 597 FEEAAELMKEMNALGFEYDLITY 619



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 4/292 (1%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA-GLAAEAVH 204
           PD  + + MIN  GK  + D      + M   +    V T++ +++    +    +E   
Sbjct: 333 PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFS 392

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F RM+  G +P    +SI+I   C+  R  +A    + + +K F P    Y +L+    
Sbjct: 393 WFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 452

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A     A  +F+E+K      +   Y+++I  L + G++  A ++F EM ++GC PN  
Sbjct: 453 KAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +N LM    +A   ++ L    +M+  GC  D  +YN +++   K G    A+++L +M
Sbjct: 513 AYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNM 572

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
                 P+A ++N +   +S  G    A  +  +M  L  E + +TY+ +++
Sbjct: 573 KNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 133/280 (47%), Gaps = 3/280 (1%)

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
           + ++R    A  I +A  +F ++K    QP    Y+ +I  L   GQ  + H+++ EM  
Sbjct: 163 SQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN 222

Query: 316 VG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
            G C+P+++T++ L+    K  R +  +++ N+MK  G +     Y  +I    K   + 
Sbjct: 223 EGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVH 282

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A+ +   M    C P+  T+  + R + K G ++ A+  Y +M+   C+P+TV  N ++
Sbjct: 283 GALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMI 342

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI-TMYCGMGHWNNAYKYIREMIEEKC 493
                +   D  LKL +EM  +   PNV TY  +I  ++      +  + +   M +   
Sbjct: 343 NFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERM-KGSG 401

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           + P    Y +++    +  +++K   L+E+M ++GF   P
Sbjct: 402 ISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCP 441



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 1/239 (0%)

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           + + + MK   +  +  T+SIL+  + +     +A+     M+E G  P   A+  +I  
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450

Query: 228 LCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           L + +R   A   F  LK+        VY  +++   +AG + +A  +F EM   G  PN
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           VY Y+ ++  L R   +  A     +M E GC P+  ++N ++    K     + +++  
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            MK    + D ++YN ++      G  E+A +++  M   G   +  T++ I   I K+
Sbjct: 571 NMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 99/222 (44%), Gaps = 34/222 (15%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F   P  Y  +I+  GK +++DLA      +K      +   ++++++   +AG   +A+
Sbjct: 437 FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAI 496

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
           + F+ M + GC P                                  +V  Y  L+ G  
Sbjct: 497 NLFDEMSKLGCTP----------------------------------NVYAYNALMSGLA 522

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RA  + EA    R+M+  G  P++ +Y+I+++ L + G   RA ++   M     +P+++
Sbjct: 523 RACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAV 582

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           ++N ++     A   E+  ++  +M  LG E D ITY+ +++
Sbjct: 583 SYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 1/157 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S  +Y  MI   GK  + D A +  D M        V  ++ L+    RA +  EA+   
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
            +M+E+GC PD  +++I+++ L +      A     ++K+   +PD + Y  ++     A
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHA 594

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           G   EA  + +EM   G + ++ TYS +++A+ +  Q
Sbjct: 595 GMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 184/363 (50%), Gaps = 2/363 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   +  +   A+  +  +     E    TF+ L++     G  +EAV   +RM E G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD + ++ +++ +CR    S A      ++++  + DV  Y+ ++   CR G I  A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F+EM+  GI+ +V TY+ ++  LC+ G+      +  +M+     PN ITFN L+ V 
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           VK  + ++  ++Y +M   G   + ITYN L+D +C   +L +A  +L+ MVR  C+P+ 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  + +    +  V+   +++  +       N VTY+IL+Q F  S    +  +L +E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  + V P+V TY IL+   C  G    A +   ++ + K +  G  +Y  +++ + + G
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTIIEGMCKGG 487

Query: 513 QLQ 515
           +++
Sbjct: 488 KVE 490



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 185/367 (50%), Gaps = 2/367 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
            + +QF+L   F   ++   +   + T +I++  + R      A     ++ + G  PD 
Sbjct: 99  ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             F+ +I  L  + + SEA    D + ++  +PDV+ Y ++V G CR+G+ S A  + R+
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   ++ +V+TYS +ID+LCR G I  A  +F EM   G + + +T+N+L+R   KA +
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
                 +   M       + IT+N L+D   K+GKL++A ++   M+ +G +PN  T+N 
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +         ++ A+ M   M   KC P+ VT+  L++ +   K  D  +K+ + + +  
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +  N  TY IL+  +C  G    A +  +EM+    L P    Y ++L  L   G+L+K 
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKA 457

Query: 518 EELVEKM 524
            E+ E +
Sbjct: 458 LEIFEDL 464



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 195/411 (47%), Gaps = 40/411 (9%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L GKV +   A   +D M     +  V T++ +V    R+G  + A+    +MEE     
Sbjct: 170 LEGKVSE---AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D   +S +I  LCR      A S F  ++ K  +  V+ Y +LVRG C+AG  ++   + 
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           ++M    I PNV T+++++D   + G++  A++++ EM+  G  PN IT+N LM  +   
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
           +R  +   + + M R  C  D +T+  LI  +C   +++D +KV  ++ ++G   NA T+
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           +++ +   + G +  A  ++ +M      P+ +TY IL+     +   +  L++ +++++
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466

Query: 456 NE-----------------------------------VEPNVNTYRILITMYCGMGHWNN 480
           ++                                   V+PNV TY ++I+  C  G  + 
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           A   +R+M EE    P    Y  +++   R G L    +L+E+M   GF+A
Sbjct: 527 ANILLRKM-EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 167/322 (51%), Gaps = 1/322 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++    K  +++     +  M SR +   V TF++L+  +V+ G   EA   +  M 
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P+ I ++ ++   C + R SEA +  D + ++K  PD++ +T+L++G+C    + 
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +  +VFR +   G+  N  TYSI++   C+ G+I  A ++F EM+  G  P+ +T+  L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + EK L+++  +++   +   + Y  +I+  CK GK+EDA  +  S+  KG  
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+ ++   + K G ++ A+ +  KM++    PN  TYN L++            KL
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565

Query: 450 KKEMEENEVEPNVNTYRILITM 471
            +EM+      + ++ +++I M
Sbjct: 566 IEEMKSCGFSADASSIKMVIDM 587



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 143/348 (41%), Gaps = 69/348 (19%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P ++ ++       R    +      +++++ GI  N+YT +I+I+  CRC +   A+ V
Sbjct: 86  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN-------- 361
             +++++G EP++ TFN L++      +  + + + ++M   GC+ D +TYN        
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 362 ---------------------------FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
                                       +ID  C+DG ++ AI +   M  KG   +  T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N + R + K G  N    +   M   +  PN +T+N+L+ +F          +L KEM 
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC--------------------- 493
              + PN+ TY  L+  YC     + A   +  M+  KC                     
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 494 -------------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                        L   +  Y +++Q   ++G+++  EEL ++MV  G
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITFNNL 328
           +A  +F+EM  +   P++  +S    A+ R  Q     D F + LE+ G   N  T N +
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNIM 129

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +  +T     V  ++ +LG E DT T+N LI     +GK+ +A+ +++ MV  GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N I   I + GD + A  +  KM++   + +  TY+ ++         D  + 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L KEME   ++ +V TY  L+   C  G WN+    +++M+  + + P    + ++L   
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVF 308

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            + G+LQ+  EL ++M+ RG +
Sbjct: 309 VKEGKLQEANELYKEMITRGIS 330



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 38/198 (19%)

Query: 370 DGKLEDAIKVLNSMVRK-----------------------------------GCNPNAST 394
           D K +DAI +   M+R                                    G   N  T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDMVLKLKKEM 453
            N++  C  +      A+ + GK+  L  EP+T T+N L++ +F   K ++ V+ L   M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV-LVDRM 184

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            EN  +P+V TY  ++   C  G  + A   +R+M EE+ +K     Y  ++  L R G 
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGC 243

Query: 514 LQKHEELVEKMVDRGFTA 531
           +     L ++M  +G  +
Sbjct: 244 IDAAISLFKEMETKGIKS 261


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 192/401 (47%), Gaps = 7/401 (1%)

Query: 131 VLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            L  F+W   + ++    D  +   +I++ GK  +   A +  + ++     + V +++ 
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQSFFDSLK-D 246
           L+  +  +G   EAV+ F +MEE GC P  I +++++++  +     ++  S  + +K D
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273

Query: 247 KFEPDVIVYTNLVRGWCRAGNI-SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
              PD   Y  L+   C+ G++  EA +VF EMK AG   +  TY+ ++D   +  +   
Sbjct: 274 GIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  V  EM+  G  P+ +T+N+L+  + +    ++ +++ NQM   G + D  TY  L+ 
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              + GK+E A+ +   M   GC PN  TFN   +     G      +++ ++      P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + VT+N L+ +F  +     V  + KEM+     P   T+  LI+ Y   G +  A    
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           R M++   + P  S Y  VL  L R G  ++ E+++ +M D
Sbjct: 513 RRMLDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 182/387 (47%), Gaps = 4/387 (1%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD   Y+ +I    +      A    + MK+        T++ L+  Y ++    EA+ 
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             N M   G +P  + ++ +IS   R     EA    + + +K  +PDV  YT L+ G+ 
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RAG +  A  +F EM+ AG +PN+ T++  I      G+ T    +F E+   G  P+ +
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+ V  +     +V  V+ +MKR G   +  T+N LI  + + G  E A+ V   M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +  G  P+ ST+N +   +++ G    + ++  +M+D +C+PN +TY  L+  +A  K  
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
            ++  L +E+    +EP     + L+ +         A +   E+ +E+   P  +    
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNS 634

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++    R   + K   +++ M +RGFT
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFT 661



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/439 (20%), Positives = 189/439 (43%), Gaps = 43/439 (9%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAG--KVR 162
           +  SPS V +    S   R G+ L + +   N +  +      PD++     L+G  +  
Sbjct: 343 NGFSPSIVTYNSLISAYARDGM-LDEAMELKNQMAEKGT---KPDVFTYTTLLSGFERAG 398

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + + A    + M++   +  + TF+  ++ Y   G   E +  F+ +   G +PD + ++
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            ++++  +    SE    F  +K   F P+   +  L+  + R G+  +A  V+R M  A
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA------ 335
           G+ P++ TY+ V+ AL R G   ++  V AEM +  C+PN +T+ +L+  +         
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578

Query: 336 -SRTEKVL----------------------------QVYNQMKRLGCEADTITYNFLIDC 366
            S  E+V                             + ++++K  G   D  T N ++  
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           + +   +  A  VL+ M  +G  P+ +T+N +    S+  D   +  +  ++     +P+
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            ++YN ++  +  +       ++  EM  + + P+V TY   I  Y     +  A   +R
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758

Query: 487 EMIEEKCLKPGSSVYEMVL 505
            MI+  C +P  + Y  ++
Sbjct: 759 YMIKHGC-RPNQNTYNSIV 776



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 140/306 (45%), Gaps = 1/306 (0%)

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           +TF+ L+  Y R G   +A+  + RM + G  PD   ++ V++ L R     +++     
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           ++D + +P+ + Y +L+  +     I     +  E+    I+P       ++    +C  
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A   F+E+ E G  P+  T N+++ ++ +     K   V + MK  G      TYN 
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  H +      + ++L  ++ KG  P+  ++N +     +   +  A R++ +M++  
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN  +  +A     +  + + + M ++   PN NTY  ++  YC +   + A 
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789

Query: 483 KYIREM 488
            ++ ++
Sbjct: 790 LFVEDL 795



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 139/317 (43%), Gaps = 36/317 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV   + ++ +I+   +   F+ A      M    V   + T++ ++    R G+  
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541

Query: 201 EAVHAFNRMEEYGCAPDKIA------------------------FSIVIS---------- 226
           ++      ME+  C P+++                         +S VI           
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601

Query: 227 ILCRK-RRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           ++C K     EA+  F  LK++ F PD+    ++V  + R   +++A  V   MK  G  
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P++ TY+ ++    R     ++ ++  E+L  G +P+ I++N ++  + + +R     ++
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +++M+  G   D ITYN  I  +  D   E+AI V+  M++ GC PN +T+N I     K
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781

Query: 405 LGDVNGAHRMYGKMKDL 421
           L   + A      +++L
Sbjct: 782 LNRKDEAKLFVEDLRNL 798



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 2/139 (1%)

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
           S   +I   + K G V+ A  M+  +++     +  +Y  L+  FA S      + + K+
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233

Query: 453 MEENEVEPNVNTYRILITMYCGMGH-WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           MEE+  +P + TY +++ ++  MG  WN     + +M +   + P +  Y  ++   +R 
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM-KSDGIAPDAYTYNTLITCCKRG 292

Query: 512 GQLQKHEELVEKMVDRGFT 530
              Q+  ++ E+M   GF+
Sbjct: 293 SLHQEAAQVFEEMKAAGFS 311


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 192/381 (50%), Gaps = 5/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I+   +++  D A  ++  M  + +  +V+T++IL+  Y R  + +        ME
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  P+ I++  +I+ LC+  +  EA+    D +     P+  +Y  L+ G C  G + 
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA R F EM   GI   + TY+ +I  LC+ G++  A ++F  +   G  P+ IT+N+L+
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG-KLEDAIKVLNSMVRKGC 388
             +  A  ++K L++Y  MK+LG +    T++ LI    K+G KL++ +   N M++   
Sbjct: 495 SGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETL--FNEMLQMNL 552

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +P+   +N +  C  + G V  A  +  +M D+   P+  TYN L+              
Sbjct: 553 SPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKD 612

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L  +M+   + P  +TY +LI  +C +  +N AY + REM+E   L P   +   +   L
Sbjct: 613 LVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFL-PNVCICNELSTGL 671

Query: 509 RRAGQLQKHEELVEKMVDRGF 529
           R+ G+LQ+ + +  +M+  G 
Sbjct: 672 RKDGRLQEAQSICSEMIANGM 692



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 182/406 (44%), Gaps = 18/406 (4%)

Query: 143 EFVHSPDLYHEMINL---------------AGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           +F +  DL+ EM+ L               A K+    LA    + MK R V   V  ++
Sbjct: 46  KFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYN 105

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KD 246
           +L+    +     +A   F  M      P+++ F+ +I   C+      A    + + K+
Sbjct: 106 VLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKE 165

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ-ITR 305
           K EP +I + +L+ G C+A  I EA  +  E+K  G  P+ +TYSI+ D L +       
Sbjct: 166 KVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGA 225

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A D++ E +  G + ++ T + L+    K  + EK  +V   +   G     + YN +++
Sbjct: 226 ALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            +C+ G ++ AI  +  M  +G  PN   FN +     ++  ++ A     KM      P
Sbjct: 286 GYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  TYNIL+  +          ++ +EMEEN  +PNV +Y  LI   C  G    A   +
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           R+M+    L P +++Y M++      G+L++     ++M   G  A
Sbjct: 406 RDMVGRGVL-PNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGA 450



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 183/390 (46%), Gaps = 8/390 (2%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMK---SRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           PD +   I   G ++  D A   +DL +    + V+I   T SIL+    + G   +A  
Sbjct: 204 PDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEE 263

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               + E+G  P ++ ++ +++  C+      A    + ++ +   P+ I + +++  +C
Sbjct: 264 VLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFC 323

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
               I +AE   ++M   GI P+V TY+I+ID   R    +R   +  EM E G +PN I
Sbjct: 324 EMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVI 383

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++ +L+    K  +  +   V   M   G   +   YN LID  C  GKL +A++  + M
Sbjct: 384 SYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM 443

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            + G      T+N + + + K+G +  A  M+  +      P+ +TYN L+  ++ + ++
Sbjct: 444 SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNS 503

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              L+L + M++  ++P +NT+  LI+  C             EM++   L P   VY  
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLIS-GCSKEGIKLKETLFNEMLQMN-LSPDRVVYNA 561

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           ++   +  G +QK   L ++MVD G   RP
Sbjct: 562 MIHCYQETGHVQKAFSLQKEMVDMG--VRP 589



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 191/387 (49%), Gaps = 13/387 (3%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R + V +  +Y+ +I    K ++   A      M  RN+     TF+ L+  Y +AG   
Sbjct: 94  RRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVD 153

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLV 259
            A+    RM++    P  I F+ ++S LC+ RR  EA+   + +K + F PD   Y+ + 
Sbjct: 154 VAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIF 213

Query: 260 RGWCRAGNISEAE-RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
            G  ++ + + A   ++RE    G++ + YT SI+++ LC+ G++ +A +V   ++E G 
Sbjct: 214 DGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P  + +N ++  + +    ++ +    QM+  G   + I +N +ID  C+   ++ A +
Sbjct: 274 VPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEE 333

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            +  MV KG  P+  T+N++     +L   +   ++  +M++   +PN ++Y  L+    
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLC 393

Query: 439 TSK---STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                   +MVL   ++M    V PN N Y +LI   C +G    A ++  EM +     
Sbjct: 394 KDGKILEAEMVL---RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGI-- 448

Query: 496 PGSSV--YEMVLQQLRRAGQLQKHEEL 520
            G+++  Y  +++ L + G+L++ EE+
Sbjct: 449 -GATIVTYNSLIKGLCKMGKLKEAEEM 474



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 3/333 (0%)

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNL 258
           ++    ++ M + G  P      +++  L   ++       F  +    F PD +VY   
Sbjct: 13  SQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRA 72

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +    + G++  A  +F  MK   + PNV+ Y+++I  LC+  +I  A  +F EM     
Sbjct: 73  MLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNL 132

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            PN +TFN L+  + KA   +  + +  +MK+   E   IT+N L+   CK  ++E+A  
Sbjct: 133 VPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARC 192

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH-RMYGKMKDLKCEPNTVTYNILMQMF 437
           +LN +   G  P+  T+++IF  + K  D  GA   +Y +      + +  T +IL+   
Sbjct: 193 MLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGL 252

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 +   ++ K + E+ + P    Y  ++  YC +G  + A   I +M E + L+P 
Sbjct: 253 CKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQM-ESRGLRPN 311

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              +  V+ +      + K EE V+KMV +G  
Sbjct: 312 CIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIA 344



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 122/273 (44%), Gaps = 2/273 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           + ++Y+ +I+ +  V +   A  F D M    +  T+ T++ L++   + G   EA   F
Sbjct: 416 NANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
             +   G  PD I ++ +IS       + +    ++++K    +P +  +  L+ G  + 
Sbjct: 476 FLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKE 535

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G I   E +F EM    + P+   Y+ +I      G + +A  +  EM+++G  P++ T+
Sbjct: 536 G-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTY 594

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+L+  H+K  +  +   + + MK  G   +  TY+ LI  HC       A      M+ 
Sbjct: 595 NSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLE 654

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
            G  PN    N +   + K G +  A  +  +M
Sbjct: 655 NGFLPNVCICNELSTGLRKDGRLQEAQSICSEM 687


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 190/360 (52%), Gaps = 5/360 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R ++  + TF+I +    +AG   +A      ++ +G +P+ + ++ +I   C+K  
Sbjct: 191 MIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS 250

Query: 234 ASE---AQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           A +   A +   + L +K  P+ I +  L+ G+C+  N+  A+  F EM+  G++PN+ T
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +I+ L   G++  A  ++ +M+ +G +PN +TFN L+    K    ++  ++++ + 
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
                 + IT+N +ID  CK G +E+   + NSM+ +G  PN ST+N +   + +  +V 
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVR 430

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A ++  +M++ + + + VTYNIL+  +          KL  EM    V+PN  TY  L+
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             YC  G+   A K +R  +E++  +     Y ++++   + G+L+    L+ +M+++G 
Sbjct: 491 DGYCMEGNLKAALK-VRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 1/285 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+  + +      A +AF  M+  G  P+ + ++ +I+ L    +  EA + +D +
Sbjct: 275 TFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM 334

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                +P+++ +  L+ G+C+   I EA ++F ++    + PN  T++ +IDA C+ G +
Sbjct: 335 VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMM 394

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +   ML+ G  PN  T+N L+    +        ++ N+M+    +AD +TYN L
Sbjct: 395 EEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNIL 454

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   CKDG+   A K+L  M+  G  PN  T+N +       G++  A ++  +M+    
Sbjct: 455 IGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGK 514

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             N VTYN+L++ F  +   +   +L  EM E  + PN  TY ++
Sbjct: 515 RANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 173/397 (43%), Gaps = 21/397 (5%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           VL FF W        +  +   ++++L    +++     F+D +  +N + TV +     
Sbjct: 61  VLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKL-VKNEKHTVSS----- 114

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
                        H+     +  CA   I   +V++ +      S  + F       F+ 
Sbjct: 115 -----------VFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKL 163

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
            +     L+    +     E + V++EM    IQPN+ T++I I+ LC+ G++ +A DV 
Sbjct: 164 SLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVI 223

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA---DTITYNFLIDCH 367
            ++   G  PN +T+N L+  H K     K+ +    +K +       + IT+N LID  
Sbjct: 224 EDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGF 283

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CKD  +  A      M R+G  PN  T+N +   +S  G ++ A  ++ KM  L  +PN 
Sbjct: 284 CKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNI 343

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VT+N L+  F   K      KL  ++ E ++ PN  T+  +I  +C  G     +     
Sbjct: 344 VTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           M++E    P  S Y  ++  L R   ++  ++L+ +M
Sbjct: 404 MLDEGIF-PNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 1/212 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K +    A    D +  +++     TF+ ++  + +AG+  E     N M 
Sbjct: 346 FNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSML 405

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ +I+ LCR +    A+   + +++ + + DV+ Y  L+ GWC+ G  S
Sbjct: 406 DEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPS 465

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +AE++  EM   G++PN  TY+ ++D  C  G +  A  V  +M + G   N +T+N L+
Sbjct: 466 KAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLI 525

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   K  + E   ++ N+M   G   +  TY+
Sbjct: 526 KGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD 557



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 1/188 (0%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           A  + V +   ++ MI+   K    +  +   + M    +   V T++ L+    R    
Sbjct: 370 AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNV 429

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNL 258
             A    N ME Y    D + ++I+I   C+    S+A+    + L    +P+ + Y  L
Sbjct: 430 RAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTL 489

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+C  GN+  A +V  +M+  G + NV TY+++I   C+ G++  A+ +  EMLE G 
Sbjct: 490 MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549

Query: 319 EPNSITFN 326
            PN  T++
Sbjct: 550 NPNRTTYD 557


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 182/390 (46%), Gaps = 37/390 (9%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R V   + T +I ++ + +  +  EA+   + +   G  PD I ++ +I  LC+  +  E
Sbjct: 245 RGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVE 303

Query: 237 AQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A+ +   +  + +EPD   Y +++ G+C+ G +  A+++ R+    G  P+  TY  +I+
Sbjct: 304 AEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLIN 363

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            LC+ G I RA +VF E +E G +PN +  N L++   +     + L++ N+M   GC  
Sbjct: 364 GLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSP 423

Query: 356 DTITYNF-----------------------------------LIDCHCKDGKLEDAIKVL 380
           D  TYN                                    LID +CK  KL++AI+++
Sbjct: 424 DIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIV 483

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M   G +P+  T+N I   + K G        +  M +  C PN +TYNIL + F  +
Sbjct: 484 DRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKA 543

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
           +  +  L L +EM+   + P+V  +  L+  +C  G  + AY+  + + E+       + 
Sbjct: 544 RKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIAT 603

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           Y +++        +   E+L  KM + GF+
Sbjct: 604 YNIMINAFAGKLNMNMAEKLFNKMCENGFS 633



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 199/423 (47%), Gaps = 40/423 (9%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+      + G  + F +  A H++  M +   E    T++ ++  Y + G+   A  
Sbjct: 282 TPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQ 341

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
                   G  PD+  +  +I+ LC+      A + F+   +K  +P++++   LV+G  
Sbjct: 342 ILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLS 401

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I +A ++  EM   G  P+++TY++VI+ LC+ G ++ A ++  + +  G  P+  
Sbjct: 402 QQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVF 461

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+  + K  + +  +++ ++M   G   D ITYN +++  CK GK ED +     M
Sbjct: 462 TFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLM 521

Query: 384 VRKGCNPNASTFNMIFRCISKL-----------------------------------GDV 408
           + KGC PN  T+N++     K                                    GD+
Sbjct: 522 MEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDL 581

Query: 409 NGAHRMYGKMKD-LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +GA++++ ++ +  K      TYNI++  FA   + +M  KL  +M EN   P+  TYR+
Sbjct: 582 DGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRV 641

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I  +C  G+ N+ Y ++   I EK L P  + +  VL  L    ++ +   ++  MV +
Sbjct: 642 MIDGFCKTGNINSGYSFLLVKI-EKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700

Query: 528 GFT 530
           G  
Sbjct: 701 GIV 703



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 191/410 (46%), Gaps = 10/410 (2%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
           ++  + + + + FFN     P    S   Y+ ++N+  + R FD A      M+ + +  
Sbjct: 92  IQEAVDVFERMDFFN---CEP----SVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVP 144

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
            V TF+I ++ + R      A    N M   GC    +A+  VI     +    EA   F
Sbjct: 145 DVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELF 204

Query: 242 DS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           +  L     PD++ +  L+   CR G++ E+ER+  ++   G+ PN++T +I I   C+ 
Sbjct: 205 EEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQR 264

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
             +  A  +  + +  G  P+ IT+N L+    K  +  +      +M   G E D  TY
Sbjct: 265 AMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTY 323

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N +ID +CK G +++A ++L     KG  P+ ST+  +   + + GD++ A  ++ +  +
Sbjct: 324 NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAME 383

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              +PN V  N L++  +        LKL  EM EN   P++ TY ++I   C +G  ++
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSD 443

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           A   + + I +  L P    +  ++    +  +L    E+V++M + G +
Sbjct: 444 ADNLVIDAIAKGHL-PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS 492



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 180/404 (44%), Gaps = 8/404 (1%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR-NVE--ITVDT 185
           L+ L  FN V     F H+   Y  MI   G   +F+       L ++R N++  +    
Sbjct: 21  LKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEV--LAETRMNIDNGLLEGV 78

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           +   +R Y R G   EAV  F RM+ + C P   +++ +++IL   R   +A   +  ++
Sbjct: 79  YIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMR 138

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           DK   PDV  +T  ++ +CR      A R+   M   G + +   Y  VI          
Sbjct: 139 DKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRV 198

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            AH++F EML +G  P+ + FN L+    +    ++  ++ N++ + G   +  T N  I
Sbjct: 199 EAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI 258

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
              C+   L +AI++L+  V +G  P+  T+N +   + K   V  A     KM +   E
Sbjct: 259 QGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE 317

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+  TYN ++  +          ++ ++       P+ +TY  LI   C  G  + A   
Sbjct: 318 PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINV 377

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             E + EK LKP   +   +++ L + G + +  +L+ +M + G
Sbjct: 378 FNEAM-EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 2/277 (0%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           VY   +R + R G I EA  VF  M     +P+V +Y+ +++ L       +AH V+  M
Sbjct: 78  VYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM 137

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            + G  P+  TF   M+   + SR     ++ N M   GCE+  + Y  +I    ++   
Sbjct: 138 RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHR 197

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A ++   M+  G  P+   FN +   + + G V  + R+  K+      PN  T NI 
Sbjct: 198 VEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF 257

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +Q F      +  ++L   +    + P+V TY  LI   C       A  Y+R+M+ E  
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGRG-LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG- 315

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +P    Y  ++    + G +Q  ++++     +GF 
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFV 352



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 6/263 (2%)

Query: 146 HSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD++  + +I+   K  + D A   +D M +  V   V T++ ++    +AG   + +
Sbjct: 456 HLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVM 515

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             F  M E GC P+ I ++I+    C+ R+  EA +  + +++K   PDV+ +  L++G+
Sbjct: 516 GTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGF 575

Query: 263 CRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           C  G++  A ++F+ + +       + TY+I+I+A      +  A  +F +M E G  P+
Sbjct: 576 CDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPD 635

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           S T+  ++    K                 G      T+  +++C C   ++ +A+ +++
Sbjct: 636 SYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIH 695

Query: 382 SMVRKGCNPNASTFNMIFRCISK 404
            MV KG  P     N IF    K
Sbjct: 696 LMVHKGIVP--EVVNTIFEADKK 716


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 165/316 (52%), Gaps = 4/316 (1%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D ++++ V++ LCR+    +A  F    +  +  P  + YT L+R  C      +A  + 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           R+M+ +G++P+V TY  +I  LC    + +A ++  EM E G EPN + ++ L++ + KA
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R E V +V+ +M   G E D + Y  LID  C++GK++ A +V++ M+ +G  PN  T+
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N++   + K G V  A  +   M +     + VTYN L+   +     D  + L +EM  
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 456 NE--VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            E  VEPNV T+  +I   C  G    A++ +R+M+ E         + +++  L R  +
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQ-VRDMMAENGCACNLVTFNLLIGGLLRVHK 375

Query: 514 LQKHEELVEKMVDRGF 529
           ++K  EL+++M   G 
Sbjct: 376 VKKAMELMDEMASSGL 391



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 172/348 (49%), Gaps = 4/348 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
           +++ ++    R G   +A     R+  +   P  ++++ ++  LC +RR  +A     D 
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                 PDV+ Y  L+RG C A ++ +A  + REM  +GI+PNV  YS ++   C+ G+ 
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                VF EM   G EP+ + +  L+    +  + +K  QV ++M   G E + +TYN L
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVL 259

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM--KDL 421
           I+  CK+G +++A+ + N+M+ KG   +A T+N +   +S + +++ A  +  +M   + 
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET 319

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             EPN VT+N ++     +       +++  M EN    N+ T+ +LI     +     A
Sbjct: 320 MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKA 379

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            + + EM     L+P S  Y +++    +  Q+ + E L+ KM   G 
Sbjct: 380 MELMDEMASSG-LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGI 426



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 194/432 (44%), Gaps = 11/432 (2%)

Query: 104 AHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           AH   P+ V +  ++   C  R     + +L        RP+ V    L   + + A   
Sbjct: 106 AHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAA--- 162

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
              D A   +  M    +E  V  +S L++ Y +AG        F  M   G  PD + +
Sbjct: 163 -DVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMY 221

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + +I  LCR+ +  +A    D + ++  EP+V+ Y  L+   C+ G++ EA  +   M  
Sbjct: 222 TGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLE 281

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML--EVGCEPNSITFNNLMRVHVKASRT 338
            G+  +  TY+ +I  L    ++  A  +  EM+  E   EPN +TFN+++    K  R 
Sbjct: 282 KGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRM 341

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            +  QV + M   GC  + +T+N LI    +  K++ A+++++ M   G  P++ T++++
Sbjct: 342 RQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSIL 401

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                K+  V+ A  +  KM+    EP  V Y  L+         +       EM +N  
Sbjct: 402 INGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-C 460

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           + +V  Y  +I   C +    +A ++++ M++E  L P S  Y M++     +G L   E
Sbjct: 461 KLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG-LIPDSVTYSMLINMFANSGDLGAAE 519

Query: 519 ELVEKMVDRGFT 530
            ++++M   GF 
Sbjct: 520 RVLKQMTASGFV 531



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 5/245 (2%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           G++RQ   A+   D+M        + TF++L+   +R     +A+   + M   G  PD 
Sbjct: 339 GRMRQ---AFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDS 395

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             +SI+I+  C+  +   A+S    + +D  EP+++ Y  L+   C  G + +A   F E
Sbjct: 396 FTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE 455

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M     + +V  YS +I   CR      A +    ML+ G  P+S+T++ L+ +   +  
Sbjct: 456 MH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGD 514

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
                +V  QM   G   D   ++ LI  +   G  E  ++++  M  K    ++   + 
Sbjct: 515 LGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIIST 574

Query: 398 IFRCI 402
           I+ C+
Sbjct: 575 IYTCL 579


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 226/490 (46%), Gaps = 44/490 (8%)

Query: 45  SSPDTPFLSP------EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGF 98
           S P  P++        +ET IS++  ++IK       NP     P+L P   +P LS   
Sbjct: 12  SHPKPPWVQSLHTSAIQETSISDEVFTVIK-----TMNPME---PALEP--MVPFLS--- 58

Query: 99  SQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEF--VHSPDLYHEM-I 155
                     P  V  +I+     + G        FF W +    F    S DL  ++ I
Sbjct: 59  ----------PKIVTSIIQNPPNPQLG------FRFFIWASNFKRFRAWESCDLITDLLI 102

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           N  G     +L    ++ +K+  +++  D F +L++ Y++ GL  +A+  F  M ++ C 
Sbjct: 103 NQNG----LELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCT 158

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           PD   +++++ +L +K     A + +  + K    P+V  ++ L+ G C++GN+ +A  +
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           F EM   GI P+ +TY +VI  LCR  ++  A+ +F +M + G  P+ +T N L+     
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM 278

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             R ++   +    ++ G   D   Y+ LI    +  + ED   +   M+     P+   
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           + ++ + +++ G V  A  +  +M +    P+TV YN+L++ F           L+ E+ 
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            ++  PNV TY ILI+  C  G   +A +   EM +  C  P +  +  ++  L + GQL
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCY-PSAVTFNSLIDGLCKTGQL 457

Query: 515 QKHEELVEKM 524
           +K   L  KM
Sbjct: 458 EKAHLLFYKM 467



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 201/439 (45%), Gaps = 52/439 (11%)

Query: 143 EFVHSPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +F  +PD+Y   + L   +++    LA      M   N    V TFSIL+    ++G   
Sbjct: 154 DFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVK 213

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------- 247
           +A+H F+ M + G  PD   + +VIS LCR +R  +A   FD +KD              
Sbjct: 214 DALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALL 273

Query: 248 ------------------FEPDVIV-----YTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
                             FE D  V     Y+ L+RG  RA    + + ++R+M    ++
Sbjct: 274 NGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVK 333

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+VY Y+I++  L   G++  A ++  EM E G  P+++ +N L++         +   +
Sbjct: 334 PDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSL 393

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             ++ R  C  +  TY+ LI   C++G   DA ++ N M + GC P+A TFN +   + K
Sbjct: 394 QLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCK 453

Query: 405 LGDVNGAHRMYGKMK---------DLKCEP----NTVTYNILMQMFATSKSTDMVLKLKK 451
            G +  AH ++ KM+          L   P    ++ +   +++    S       ++  
Sbjct: 454 TGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILM 513

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           ++ ++   P + TY IL+  +C +G++N AYK  REM + K L P +  Y  ++  L R 
Sbjct: 514 QLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREM-QFKGLSPDTVTYGTLINGLLRF 572

Query: 512 GQLQKHEELVEKMVDRGFT 530
            + +   ++ ++M   G T
Sbjct: 573 QREEDAYKVFDQMEKNGCT 591



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 147/351 (41%), Gaps = 21/351 (5%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T+SIL+    R GL  +A   FN ME+ GC P  + F+ +I  LC+  +  +A   F 
Sbjct: 406 VKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFY 465

Query: 243 SLKDKFEPDVIV--------------YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            ++    P + +                 +V   C +G I +A R+  ++  +G  P +Y
Sbjct: 466 KMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIY 525

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+I+++  C+ G    A+ +F EM   G  P+++T+  L+   ++  R E   +V++QM
Sbjct: 526 TYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQM 585

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL--- 405
           ++ GC  D   Y  ++   C+  +L  A  +    +R   +        I     K    
Sbjct: 586 EKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVE 645

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             V G   M  K+ D    P    Y I +     ++     LK+   +EE +V       
Sbjct: 646 KAVRGLLEMDFKLNDFDLGP----YAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCC 701

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
             LI      G  + A       IE+  L        ++ + +RR G++ K
Sbjct: 702 VKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRRKGEMGK 752



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/223 (20%), Positives = 93/223 (41%), Gaps = 13/223 (5%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSC--GVRHGIPLLQVLSFFNWVTARPEFVHSPD 149
           PSL L  SQ   +H +  ++++ ++E+ C  G+ H          +  +    +   +P 
Sbjct: 473 PSLFLRLSQ-GPSHVLDSASLQKMVEQLCDSGLIH--------KAYRILMQLADSGDAPG 523

Query: 150 LYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           +Y   I + G  K+  F+ A+     M+ + +     T+  L+   +R     +A   F+
Sbjct: 524 IYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFD 583

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN 267
           +ME+ GC PD   +  +++ +CR+     A S +                 + G+     
Sbjct: 584 QMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQE 643

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           + +A R   EM       ++  Y+I +  LC+  ++  A  +F
Sbjct: 644 VEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIF 686


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 172/345 (49%), Gaps = 3/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQSFFDS 243
            ++ LV  + RAG   +AV  F RM + G  P  + +++V     +      E  +  DS
Sbjct: 186 AYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDS 245

Query: 244 LK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +K D  E D   Y  L+    R G   EA +VF EMK AG +P+  T++ ++D   +  +
Sbjct: 246 MKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARK 305

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
              A  V   M   GC P+ +T+N+L+  +VK    E+ L++  +M+  G + D +TY  
Sbjct: 306 HEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 365

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI    + GK++ A+   + MVR GC+PN  T+N + +     G       ++  ++   
Sbjct: 366 LISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAG 425

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ VT+N L+ +F  +     V  + KEM++    P  +TY  LI+ Y   G ++ A 
Sbjct: 426 YVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 485

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +  + MIE   + P  S Y  VL  L R G+ ++ E+L  +MVDR
Sbjct: 486 EIYKRMIEAG-IYPDISTYNAVLSALARGGRWEQAEKLFAEMVDR 529



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 178/386 (46%), Gaps = 5/386 (1%)

Query: 143 EFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA- 199
           E   +PD   Y  +++   +  +F  A      M    V+  + T++++   Y +  +  
Sbjct: 177 EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPW 236

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
            E V   + M+E G   D+  ++ +IS   R+    EA   FD +K   FEPD + + +L
Sbjct: 237 KEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSL 296

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +  + +A    EA  V + M+ AG  P+V TY+ +I A  + G +  A ++  EM   G 
Sbjct: 297 LDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 356

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           +P+ +T+  L+    +  + +  L  Y++M R GC  +  TYN LI  H   GK  + + 
Sbjct: 357 KPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMA 416

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           V + +   G  P+  T+N +     + G  +    ++ +MK     P   TY  L+  ++
Sbjct: 417 VFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 476

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
                D  +++ K M E  + P+++TY  +++     G W  A K   EM++  C KP  
Sbjct: 477 RCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDC-KPDE 535

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKM 524
             Y  +L     A +L K + L E +
Sbjct: 536 LSYSSLLHAYANAKKLDKMKTLSEDI 561



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 157/328 (47%), Gaps = 1/328 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D MK+   E    TF+ L+  Y +A    EA+    RME  GC P  + ++ +IS
Sbjct: 274 AAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLIS 333

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              +     EA      ++ +  +PDV+ YT L+ G  R G I  A   + EM   G  P
Sbjct: 334 AYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSP 393

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N+ TY+ +I      G+ T    VF ++   G  P+ +T+N L+ V  +     +V  V+
Sbjct: 394 NLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVF 453

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +MK+ G   +  TY  LI  + + G  + A+++   M+  G  P+ ST+N +   +++ 
Sbjct: 454 KEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARG 513

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G    A +++ +M D  C+P+ ++Y+ L+  +A +K  D +  L +++    +E +    
Sbjct: 514 GRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLV 573

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKC 493
           + L+ +   + +     K  +E+   +C
Sbjct: 574 KTLVLVNNKVNNLPETEKAFQELRRRRC 601



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 182/405 (44%), Gaps = 39/405 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+   +V + D A      M        + T++ L++ +   G   E +  
Sbjct: 358 PDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAV 417

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F+ +   G  PD + ++ ++S+  +    SE    F  +K   + P+   Y +L+  + R
Sbjct: 418 FDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 477

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G   +A  +++ M  AGI P++ TY+ V+ AL R G+  +A  +FAEM++  C+P+ ++
Sbjct: 478 CGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELS 537

Query: 325 FNNLMRVHVKASRTEKVL-----------------------------------QVYNQMK 349
           +++L+  +  A + +K+                                    + + +++
Sbjct: 538 YSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELR 597

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           R  C  D    N ++  + K+  ++   +VL+ M+    N +A+T+N +    S+LGD  
Sbjct: 598 RRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCE 657

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
               +  ++K     P+  +YN ++  +          +L  EM+ + V+P++ TY I I
Sbjct: 658 KCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFI 717

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
             Y     +  A   +R ++ + C +P    +  +LQ   R G++
Sbjct: 718 KSYVANIMFEEAIDLVRYLVTQGC-RPNERTFNSILQGYSRHGRM 761



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 6/237 (2%)

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
            I    R G +  A    + +LE    P++  +  L+    +A R    + V+ +M   G
Sbjct: 159 AIRVFARAGCLAEA----SAILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGG 214

Query: 353 CEADTITYNFLIDCHCK-DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
            +   +TYN +   + K     ++ + +++SM   G   +  T+N +  C  + G    A
Sbjct: 215 VQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREA 274

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            +++ +MK    EP+ VT+N L+ ++  ++  +  + + K ME     P+V TY  LI+ 
Sbjct: 275 AQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISA 334

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y   G    A +  +EM E + +KP    Y  ++  L R G++        +MV  G
Sbjct: 335 YVKDGLLEEALELKQEM-EFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNG 390



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/303 (18%), Positives = 136/303 (44%), Gaps = 15/303 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           ++   D Y  +I+   +   FD A      M    +   + T++ ++    R G   +A 
Sbjct: 461 YIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAE 520

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
             F  M +  C PD++++S ++      ++  + ++  + +  ++ E    +   LV   
Sbjct: 521 KLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVN 580

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            +  N+ E E+ F+E++      ++   + ++    +   + +  +V + M+E     ++
Sbjct: 581 NKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSA 640

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+N+LM ++ +    EK   +  ++K  G   D  +YN +I  + + G++++A ++ + 
Sbjct: 641 ATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSE 700

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL-------KCEPNTVTYNILMQ 435
           M   G  P+  T+N+  +          A+ M+ +  DL        C PN  T+N ++Q
Sbjct: 701 MKCSGVKPDIVTYNIFIKSYV-------ANIMFEEAIDLVRYLVTQGCRPNERTFNSILQ 753

Query: 436 MFA 438
            ++
Sbjct: 754 GYS 756



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/169 (20%), Positives = 76/169 (44%), Gaps = 1/169 (0%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           ++ + M+++ GK +        + LM   ++  +  T++ L+  Y R G   +       
Sbjct: 606 NVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTE 665

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGN 267
           ++  G  PD+ +++ VI    RK +  EA   F  +K    +PD++ Y   ++ +     
Sbjct: 666 IKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIM 725

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
             EA  + R +   G +PN  T++ ++    R G++  A    + + ++
Sbjct: 726 FEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPKI 774


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 183/378 (48%), Gaps = 2/378 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   K ++ +    F+  M+ + V   V T++ L+  Y R GL  EA    + M   G
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P    ++ +I+ LC+  +   A+   D  LK    PD   Y  L+   CR  N+ +AE
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R+F EM   G+ P++ ++S +I  L + G + +A   F +M   G  P+++ +  L+   
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +     + L+V ++M   GC  D +TYN +++  CK+  L +A ++   M  +G  P+ 
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  +    SK G++N A  ++  M     +P+ VTYN L+  F      + V +L  +
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M    + PN  +Y ILI  YC MG  + A++   EM+ EK  +        +++   RAG
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV-EKGFEATIITCNTIVKGYCRAG 461

Query: 513 QLQKHEELVEKMVDRGFT 530
              K +E +  M+ +G  
Sbjct: 462 NAVKADEFLSNMLLKGIV 479



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 177/365 (48%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M S+ V   + +FS L+    + G   +A+  F  M+  G APD + ++I+I 
Sbjct: 221 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 280

Query: 227 ILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR    SEA    D  L+     DV+ Y  ++ G C+   +SEA+ +F EM   G+ P
Sbjct: 281 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 340

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           + YT++ +I+   + G + +A  +F  M++   +P+ +T+N L+    K S  EKV +++
Sbjct: 341 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 400

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N M       + I+Y  LI+ +C  G + +A ++ + MV KG      T N I +   + 
Sbjct: 401 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 460

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G+   A      M      P+ +TYN L+  F   ++ D    L  +ME + + P+V TY
Sbjct: 461 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 520

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            +++  +   G    A   + +MI E+ + P  S Y  ++        L++   + ++M+
Sbjct: 521 NVILNGFSRQGRMQEAELIMLKMI-ERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 579

Query: 526 DRGFT 530
            RGF 
Sbjct: 580 QRGFV 584



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 190/385 (49%), Gaps = 8/385 (2%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P ++  ++    + R+         ++KS+ + ++++  + L+   V+ G    A   +
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
             +   G   +    +I+I+ LC+ ++    +SF   +++K   PDV+ Y  L+  +CR 
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + EA  +   M   G++P V+TY+ +I+ LC+ G+  RA  V  EML++G  P++ T+
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 326 NNLMRVHVKASRTEKVL---QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           N L+   V+  R + ++   +++++M   G   D ++++ LI    K+G L+ A+K    
Sbjct: 206 NILL---VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   G  P+   + ++     + G ++ A ++  +M +  C  + VTYN ++      K 
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                +L  EM E  V P+  T+  LI  Y   G+ N A   + EM+ ++ LKP    Y 
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT-LFEMMIQRNLKPDVVTYN 381

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDR 527
            ++    +  +++K  EL   M+ R
Sbjct: 382 TLIDGFCKGSEMEKVNELWNDMISR 406



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 188/418 (44%), Gaps = 37/418 (8%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   +    + A+  +D M  + ++  V T++ ++    + G    A   
Sbjct: 130 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 189

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M + G +PD   ++I++   CR     +A+  FD +  +   PD++ ++ L+    +
Sbjct: 190 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 249

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +A + FR+MK AG+ P+   Y+I+I   CR G ++ A  V  EMLE GC  + +T
Sbjct: 250 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 309

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    K     +  +++ +M   G   D  T+  LI+ + KDG +  A+ +   M+
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 369

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           ++   P+  T+N +     K  ++   + ++  M   +  PN ++Y IL+  +       
Sbjct: 370 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 429

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI--------------- 489
              +L  EM E   E  + T   ++  YC  G+   A +++  M+               
Sbjct: 430 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 489

Query: 490 -------------------EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                              E   L P    Y ++L    R G++Q+ E ++ KM++RG
Sbjct: 490 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 177/346 (51%), Gaps = 3/346 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  +I L  K    D A  +   MK+  +      ++IL+  + R G+ +EA+  
Sbjct: 235 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 294

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M E GC  D + ++ +++ LC+++  SEA   F  + ++   PD   +T L+ G+ +
Sbjct: 295 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 354

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GN+++A  +F  M    ++P+V TY+ +ID  C+  ++ + ++++ +M+     PN I+
Sbjct: 355 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 414

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  +       +  +++++M   G EA  IT N ++  +C+ G    A + L++M+
Sbjct: 415 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 474

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P+  T+N +     K  +++ A  +  KM++    P+ +TYN+++  F+      
Sbjct: 475 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 534

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
               +  +M E  V P+ +TY  LI  +    +   A++   EM++
Sbjct: 535 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 580



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 162/319 (50%), Gaps = 3/319 (0%)

Query: 212 YG-CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTN-LVRGWCRAGNIS 269
           YG C  + + F +++    + R+  E    F  LK K     I   N L+ G  + G + 
Sbjct: 20  YGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVD 79

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +++E+  +G+Q NVYT +I+I+ALC+  +I       ++M E G  P+ +T+N L+
Sbjct: 80  LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 139

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + +    E+  ++ + M   G +    TYN +I+  CK GK   A  VL+ M++ G +
Sbjct: 140 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 199

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ +T+N++     +  ++  A R++ +M      P+ V+++ L+ + + +   D  LK 
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            ++M+   + P+   Y ILI  +C  G  + A K   EM+E+ C+      Y  +L  L 
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD-VVTYNTILNGLC 318

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +   L + +EL  +M +RG
Sbjct: 319 KEKMLSEADELFTEMTERG 337


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 171/352 (48%), Gaps = 3/352 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F  +MK R V   + TF+I ++   R G   EA      +   G  PD I+++ +I   C
Sbjct: 239 FSKVMK-RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFC 297

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  +  EA+ +   + +   EP+   Y  ++ G+C+AG +  A+++ R+    G  P+ +
Sbjct: 298 KHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TYS +I+ LC  G + RA  VF E +E G + + I +N L++   K     + LQ+   M
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              GC  D  TYN +++  CK G L DA  +LN  + KGC P+  TFN +     K  ++
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +   M      P+ +TYN L+     ++  D V+   K M E    PN+ TY IL
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           I  +C     + A +  +EM + + L P       ++  L   G+L K  EL
Sbjct: 538 IESFCKDRKVSEAMELFKEM-KTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 199/423 (47%), Gaps = 40/423 (9%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +I    K  +   A  ++  M +  VE    T++ ++  + +AG+   A  
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWC 263
                   G  PD+  +S +I+ LC     + A + F+++++  F+  +I+Y  LV+G  
Sbjct: 343 ILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLS 402

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G + +A ++ ++M   G  P+++TY++V++ LC+ G ++ A+ +  + +  GC P+  
Sbjct: 403 KQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+  + K    +K +++ + M   G   D ITYN L++  CK  KL++ +    +M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT-------------- 429
           + KGC PN  T+N++     K   V+ A  ++ +MK     P+ VT              
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582

Query: 430 ----------------------YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
                                 +NI++  F    +  M  KL  +M  ++  P+  TYR+
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I  YC  G+ + A+ ++ E I  K L P  +    VL  L    +L +   ++  MV  
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENI-SKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 528 GFT 530
           G  
Sbjct: 702 GIV 704



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 187/381 (49%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N+  +   F  A      MK   +   V T +I ++ +   G    A+   N M 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP 173

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
             GC  + +++  VIS   ++    EA   FD  LK    PD++ +  L+   C+ GN+ 
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E+E++F ++   G+ PN++T++I I  LCR G I  A  +   ++  G  P+ I++N L+
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K S+  +     ++M   G E +  TYN +I+  CK G +++A K+L   + KG  
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI 353

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++ +   +   GD+N A  ++ +  +   + + + YN L++  +        L+L
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            K+M E+   P++ TY +++   C MG  ++A   + + I + C+ P    +  ++    
Sbjct: 414 MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI-PDIFTFNTLIDGYC 472

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           +   + K  E+++ M+  G T
Sbjct: 473 KQRNMDKAIEILDTMLSHGIT 493



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 191/409 (46%), Gaps = 3/409 (0%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI-DLMKSRNVE 180
           +R+    L  L  FN V     F H+ + Y  MI   G   +F+     + ++ K+ + +
Sbjct: 14  IRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSK 73

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
           +    +  ++R Y R G   EAV+ F RM+ Y C P   +++ +++IL      S+A   
Sbjct: 74  MLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKV 133

Query: 241 FDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           +  +KD    PDV  +T  ++ +C  G  + A R+   M   G + N  +Y  VI    +
Sbjct: 134 YMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK 193

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
                 A+ +F EML+ G  P+ +TFN L+ V  K    ++  ++++++ + G   +  T
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N  I   C+ G +++A ++L S+V +G  P+  ++N +     K   +  A     KM 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +   EPN  TYN ++  F  +       K+ ++       P+  TY  LI   C  G  N
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            A     E + EK  K    +Y  +++ L + G + +  +L++ M++ G
Sbjct: 374 RAMAVFYEAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 1/276 (0%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           VY  ++R + R G + EA  VF  M     +P+V +Y+ +++ L   G  ++AH V+  M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            ++G  P+  T    M+      R    L++ N M   GCE + ++Y  +I    K+   
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A  + + M+++G  P+  TFN +   + K G+V  + +++ K+      PN  T+NI 
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +Q      + D   +L + +    + P+V +Y  LI  +C       A  Y+ +M+    
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG- 316

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++P    Y  ++    +AG +Q  ++++   + +GF
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF 352



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 4/247 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++  + +I+   K R  D A   +D M S  +   V T++ L+    +A      V  
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M E GC P+ I ++I+I   C+ R+ SEA   F  +K +   PD++    L+ G C 
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 265 AGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            G + +A  +F  + K      +   ++I+I+A C    ++ A  +F +M    C P++ 
Sbjct: 579 NGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNY 638

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  ++  + K    +       +    G      T   +++C C   +L +A+ ++N M
Sbjct: 639 TYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLM 698

Query: 384 VRKGCNP 390
           V+ G  P
Sbjct: 699 VQNGIVP 705


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 178/396 (44%), Gaps = 39/396 (9%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   I  M  ++V   + +++ L+    +A    EAV     ME  GC P+ +  + ++ 
Sbjct: 17  AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 76

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC+  R  EA    +++K K F+ DV++Y  L+ G+C  GN+   + +F EM   GI  
Sbjct: 77  GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISA 136

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TYS ++  LCR GQ   A+ V   M E G  P+ +T+  L+    K  R    + + 
Sbjct: 137 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 196

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG---------------CN- 389
           N M   G E   +TYN L+   CK+G + DA K+L  M+ KG               C+ 
Sbjct: 197 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDK 256

Query: 390 ---------------------PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
                                PN  TFNM+   + K G +  A +++ KM       N V
Sbjct: 257 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV 316

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TYN+L+     +      ++L K++ +    PN  TY ILI  +C M   N A     EM
Sbjct: 317 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 376

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
                L P    Y  ++  L + G L++ + L ++M
Sbjct: 377 -RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 173/352 (49%), Gaps = 12/352 (3%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
            +I+++   R G   EA+     M     +PD ++++ +I+ LC+ ++  EA      ++
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
                P+ +  T L+ G C+ G + EA  +   MK  G   +V  Y  +I   C  G + 
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           R  ++F EML  G   N +T++ L+    +  + ++   V N M   G   D +TY  LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  CKDG+   A+ +LN MV KG  P+  T+N++   + K G V  A ++   M +   +
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENE--VEPNVNTYRILITMYCGMGHWNNAY 482
            + VTYN LM+        D  LKL   M +NE  +EPNV T+ +LI   C  G    A 
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 483 KYIREMIEEKCLKPGSS----VYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           K  R+M+     K GS      Y M+L    +AG++++  EL ++++D GF 
Sbjct: 301 KIHRKMV-----KKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFV 347



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 186/388 (47%), Gaps = 4/388 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           LY  +I+        D      D M  + +   V T+S LV    R G   EA    N M
Sbjct: 105 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 164

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNI 268
            E+G  PD + ++ +I  LC+  RA+ A    + + +K  EP  + Y  L+ G C+ G +
Sbjct: 165 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 224

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML--EVGCEPNSITFN 326
            +A ++ R M   G + +V TY+ ++  LC  G++  A  +F  M   E   EPN  TFN
Sbjct: 225 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 284

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    K  R  K ++++ +M + G   + +TYN L+    K GK+++A+++   ++  
Sbjct: 285 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 344

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN+ T++++     K+  +N A  ++ +M+     P    YN LM       S +  
Sbjct: 345 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 404

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L +EM     EP++ ++  +I      G +    +   +M+E   L+P +  +  ++ 
Sbjct: 405 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG-LRPDALTFSTLIN 463

Query: 507 QLRRAGQLQKHEELVEKMVDRGFTARPL 534
           +L + G+L + +  +E+MV  GFT   L
Sbjct: 464 RLSKLGELDEAKSALERMVASGFTPDAL 491



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 171/401 (42%), Gaps = 42/401 (10%)

Query: 114 HVIEKSCGVRHGIPLLQVLSFFNWV-TARPEFVHSPDL--YHEMINLAGKVRQFDLAWHF 170
           +V+  SC V HG+  L      N V  A  E    PD+  Y  +I+   K  +   A   
Sbjct: 137 NVVTYSCLV-HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 195

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           ++LM  +  E +  T+++L+    + GL  +A      M E G   D + ++ ++  LC 
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255

Query: 231 KRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCR----------------------- 264
           K +  EA   F+S+ D     EP+V  +  L+ G C+                       
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 315

Query: 265 ------------AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
                       AG I EA  +++++   G  PN +TYSI+ID  C+   +  A  +F E
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   G  P    +N LM    K    E+   ++ +M    CE D I++N +ID   K G 
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
            +   ++   MV  G  P+A TF+ +   +SKLG+++ A     +M      P+ + Y+ 
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           L++  ++   T  ++ L  +M       +      ++T  C
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 110/225 (48%), Gaps = 6/225 (2%)

Query: 158 AGKVRQFDLAW-HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           AGK+++    W   +DL    N      T+SIL+  + +  +   A   F  M  +G  P
Sbjct: 328 AGKIKEAMELWKQVLDLGFVPNSF----TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 383

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVF 275
               ++ +++ LC++    +A+S F  + +   EPD+I +  ++ G  +AG+    + + 
Sbjct: 384 ALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQ 443

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M   G++P+  T+S +I+ L + G++  A      M+  G  P+++ +++L++     
Sbjct: 444 MKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSK 503

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
             T +++ + +QM   G   D    + ++ C C   +  D +++L
Sbjct: 504 GDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 2/161 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M + N E  + +F+ ++   ++AG          +M E G  PD + FS +I+ L +   
Sbjct: 411 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 470

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA+S  + +    F PD +VY +L++G    G+ +E   +  +M   G   +    S 
Sbjct: 471 LDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 530

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN-LMRVH 332
           ++  LC   Q     ++     +   E  SI+ N  LM++H
Sbjct: 531 ILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLH 571


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 188/373 (50%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L GKV++   A HF D + +    +   ++  L+    + G    A+    +++      
Sbjct: 150 LNGKVKE---ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKI 206

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + ++ +I  LC+ +   +A   +  +   K  PDV+ ++ L+ G+C  G + EA  +F
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           REM +  I P+ YT++I++DALC+ G +  A ++   M++ G  PN +T+++LM  +   
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
           ++  K   V N + ++G   +  +Y  +I+  CK   +++A+ + N M  KG  P+  T+
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + K G ++ A  +  +M D     N  TYN L+     +   D  + L K++++
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             ++P++ T+ ILI   C +G   NA    ++++  K     +  Y +++  L + G   
Sbjct: 447 QGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLL-SKGYSVNAWTYNIMVNGLCKEGLFD 505

Query: 516 KHEELVEKMVDRG 528
           + E L+ KM D G
Sbjct: 506 EAEALLSKMDDNG 518



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 176/383 (45%), Gaps = 9/383 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+   K +    A+     M ++ +   V TFS L+  +   G   EA   F  M
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
                 PD   F+I++  LC++     A++    + K+   P+V+ Y++L+ G+C    +
Sbjct: 270 VLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQV 329

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           ++A+ V   +   G  PN ++Y  +I+  C+   +  A  +F +M   G  P+ +T+N+L
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K+ R     ++ ++M   G  A+  TYN LID  CK+  ++ AI ++  +  +G 
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  TFN++   + K+G +  A  ++  +       N  TYNI++         D    
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L  +M++N + P+  TY  LI           A K +REMI          VY   L+ L
Sbjct: 510 LLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIAR------DVVY--ALEGL 561

Query: 509 RRAGQLQKHEELVEKMVDRGFTA 531
                L+   +  EK   +G+ A
Sbjct: 562 EMVLHLESEAKDQEKFGKKGYYA 584



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 170/360 (47%), Gaps = 9/360 (2%)

Query: 176 SRNVE---ITVD--TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           SR +E   IT D  TF+IL+  Y        A     ++ + G  PD I F+ +I  LC 
Sbjct: 91  SRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCL 150

Query: 231 KRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             +  EA  F D  L   F  D   Y  L+ G C+ G    A ++ R++    ++ NV  
Sbjct: 151 NGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVM 210

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +ID+LC+   +  A++++++M+     P+ +TF+ L+       + E+   ++ +M 
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
                 D  T+N L+D  CK+G L+ A  +L  M+++G  PN  T++ +      +  VN
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVN 330

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  +   +  +   PN  +Y  ++  F   K  D  L L  +M+   + P+  TY  LI
Sbjct: 331 KAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGS-SVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              C  G  + A++ + EM +    +P +   Y  ++  L +   + +   LV+K+ D+G
Sbjct: 391 DGLCKSGRISYAWELVDEMHDNG--QPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 2/328 (0%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVR 260
           A+    R+E +G  PD   F+I+I+  C     + A S     LK  +EPD I +  L++
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C  G + EA      +   G   + ++Y  +I+ LC+ G+   A  +  ++     + 
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKI 206

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N + +N ++    K        ++Y+QM       D +T++ LI   C  G+LE+A  + 
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             MV K  NP+  TFN++   + K G++ GA  M   M      PN VTY+ LM  +   
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +    +   + +    PN ++Y  +I  +C +   + A     +M + K + P    
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDM-QFKGIAPDKVT 385

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y  ++  L ++G++    ELV++M D G
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNG 413



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 138/292 (47%), Gaps = 3/292 (1%)

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGN--ISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           SF   L+ K    +I +  ++    ++ N     A  + R ++  GI P+++T++I+I+ 
Sbjct: 53  SFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINC 112

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            C   ++  A  + A++L++G EP++ITFN L++      + ++ L  ++ +  LG   D
Sbjct: 113 YCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLD 172

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             +Y  LI+  CK G+   A+++L  +  K    N   +N I   + K   V  A+ +Y 
Sbjct: 173 QFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYS 232

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M   K  P+ VT++ L+  F      +    L +EM    + P+  T+ IL+   C  G
Sbjct: 233 QMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEG 292

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   A   +  M++E  + P    Y  ++       Q+ K + ++  +   G
Sbjct: 293 NLKGAKNMLVVMMKEGVM-PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 186/389 (47%), Gaps = 4/389 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P F H+ D YH +I    + R F+     +  ++   +  + D F  ++R Y  A     
Sbjct: 80  PAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKM 139

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE--PDVIVYTNLV 259
           A+  F R++ +G      + + +++ L +  R S     F   K KF   P+V     L+
Sbjct: 140 ALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILI 199

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           +  C+  ++  A +VF EM   GI PNV TY+ ++      G +  A  VF E+ + G  
Sbjct: 200 KALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWL 259

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P++ T+  LM  +VK  R    ++V ++M+  G E + ITY  +I  +CK+ K  +A+ +
Sbjct: 260 PDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNL 319

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           LN M+ K   PN++    +   +   G V  A +M+ K+    C P+    + L+     
Sbjct: 320 LNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCK 379

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
             +     KL  E E   +  ++ TY  LI   C MG    A +   +M+E+ C+ P   
Sbjct: 380 EGNIWEARKLFNEFERGTIS-SLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCV-PNEF 437

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y M+++   + G+ ++  ++VE+M+D+G
Sbjct: 438 TYNMLIKGFLKVGKAKEVIKVVEEMLDKG 466



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 125/243 (51%), Gaps = 4/243 (1%)

Query: 148 PDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD     I + G V+Q  F  A   +D M+   VE    T+ +++  Y +   + EA++ 
Sbjct: 260 PDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNL 319

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
            N M E    P+      VI +LC + R  EA   ++ L K    PD  + + L+   C+
Sbjct: 320 LNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCK 379

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GNI EA ++F E +   I  ++ TY+ +I  +C  G++  A  ++ +MLE GC PN  T
Sbjct: 380 EGNIWEARKLFNEFERGTIS-SLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFT 438

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++  +K  + ++V++V  +M   GC  +  TY  L++   K GK E+ + +L+ ++
Sbjct: 439 YNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMII 498

Query: 385 RKG 387
             G
Sbjct: 499 SSG 501



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 132/265 (49%), Gaps = 2/265 (0%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M S  +   V T++ ++  YV  G    A   F  + ++G  PD   ++I++    ++
Sbjct: 216 DEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQ 275

Query: 232 RRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
            R ++A    D +++   EP+ I Y  ++ G+C+     EA  +  +M      PN    
Sbjct: 276 GRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALC 335

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
             VID LC  G++  A  ++ ++L+  C P++   + L+    K     +  +++N+ +R
Sbjct: 336 CKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFER 395

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G  +  +TYN LI   C+ G+L +A ++ + M+ KGC PN  T+NM+ +   K+G    
Sbjct: 396 -GTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKE 454

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQ 435
             ++  +M D  C  N  TY IL++
Sbjct: 455 VIKVVEEMLDKGCLLNESTYLILVE 479



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 116/223 (52%), Gaps = 2/223 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DS 243
           T++IL+  YV+ G   +AV   + MEE G  P+ I + ++I   C++R++ EA +   D 
Sbjct: 264 TYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDM 323

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L+ K+ P+  +   ++   C  G + EA +++ ++      P+    S +I  LC+ G I
Sbjct: 324 LEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNI 383

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F E  E G   + +T+N L+    +     +  ++++ M   GC  +  TYN L
Sbjct: 384 WEARKLFNE-FERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNML 442

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           I    K GK ++ IKV+  M+ KGC  N ST+ ++   + KLG
Sbjct: 443 IKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLG 485


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 175/332 (52%), Gaps = 5/332 (1%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTN 257
           +A H F+ +   G  PD  +++I+++ LC + R+ EA      + D      PDV+ Y+ 
Sbjct: 35  DARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++ G+ + G++ +    + EM    I PNV TY+ +I ALC+   + +A +V   M++ G
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P+ +T+N+++     + + ++ +    +M+  G E D +TYN L+D  CK+G+  +A 
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K+ +SM ++G  P  +T+  + +  +  G +   H +   M      PN   ++IL+  +
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
           A  +  +  + +  +M +  + PN  TY  +I + C  G   +A  Y  +MI+E  L PG
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG-LSPG 332

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + VY  ++  L    + ++ EEL+ +M+DRG 
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGI 364



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 4/385 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y+ +I    K +  D A   +  M    V     T++ +V  +  +G   EA+ 
Sbjct: 120 SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV 179

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
              +M   G  PD + ++ ++  LC+  R +EA+  FDS+ K   +P++  Y  L++G+ 
Sbjct: 180 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYA 239

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G + E   +   M   GI PN Y +SI++ A  +  ++  A  VF++M + G  PN++
Sbjct: 240 TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 299

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  ++ +  K+ R E  +  + QM   G     I YN LI   C   K E A +++  M
Sbjct: 300 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 359

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + +G   N   FN I     K G V  + +++  M  +  +P+ +TY+ L+  +  +   
Sbjct: 360 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 419

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   KL   M    ++P+  TY  LI  YC +    +A    REM E   + P    Y +
Sbjct: 420 DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREM-ESSGVSPDIITYNI 478

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           +LQ L +  +    +EL   +   G
Sbjct: 479 ILQGLFQTRRTAAAKELYVGITKSG 503



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 188/379 (49%), Gaps = 10/379 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++   K  +   A    D M  R ++  + T+  L++ Y   G   E    
Sbjct: 191 PDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 250

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P+   FSI++    ++ +  EA   F  ++ +   P+ + Y  ++   C+
Sbjct: 251 LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCK 310

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + +A   F +M   G+ P    Y+ +I  LC C +  RA ++  EML+ G   N+I 
Sbjct: 311 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 370

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN+++  H K  R  +  ++++ M R+G + D ITY+ LID +C  GK+++A K+L SMV
Sbjct: 371 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 430

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T++ +     K+  +  A  ++ +M+     P+ +TYNI++Q    ++ T 
Sbjct: 431 SVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 490

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVY 501
              +L   + ++  +  ++TY I++   C     ++A +    M +  C   LK  +  +
Sbjct: 491 AAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR----MFQNLCLMDLKLEARTF 546

Query: 502 EMVLQQLRRAGQLQKHEEL 520
            +++  L + G+  + ++L
Sbjct: 547 NIMIDALLKVGRNDEAKDL 565



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 178/399 (44%), Gaps = 41/399 (10%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      FSILV  Y +     EA+  F++M + G  P+ + +  VI ILC
Sbjct: 250 LLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILC 309

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG------W-------------------- 262
           +  R  +A  +F+ + D+   P  IVY +L+ G      W                    
Sbjct: 310 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 369

Query: 263 ---------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                    C+ G + E+E++F  M   G++P++ TYS +ID  C  G++  A  + A M
Sbjct: 370 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 429

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + VG +P+ +T++ L+  + K SR +  L ++ +M+  G   D ITYN ++    +  + 
Sbjct: 430 VSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 489

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK--MKDLKCEPNTVTYN 431
             A ++   + + G     ST+N+I   + K    + A RM+    + DLK E    T+N
Sbjct: 490 AAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEAR--TFN 547

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           I++         D    L      N + PN  TYR++     G G      +    M + 
Sbjct: 548 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 607

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            C    S +   ++++L + G++ +    +  + ++ F+
Sbjct: 608 GC-TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 645



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V ++S ++  + + G   +    +N M +   +P+ + ++ +I+ LC+ +   +A     
Sbjct: 88  VVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLT 147

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           ++ K    PD + Y ++V G+C +G   EA    ++M+  G++P+V TY+ ++D LC+ G
Sbjct: 148 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 207

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           + T A  +F  M + G +P   T+  L++ +       ++  + + M R G   +   ++
Sbjct: 208 RCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 267

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+  + K  K+E+A+ V + M ++G NPNA T+  +   + K G V  A   + +M D 
Sbjct: 268 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 327

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P  + YN L+    T    +   +L  EM +  +  N   +  +I  +C  G    +
Sbjct: 328 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 387

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            K    M+    +KP    Y  ++     AG++ +  +L+  MV  G 
Sbjct: 388 EKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 434



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 10/272 (3%)

Query: 148 PDL--YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           PD+  Y  +I+   LAGK+   D A   +  M S  ++    T+S L+  Y +     +A
Sbjct: 401 PDIITYSTLIDGYCLAGKM---DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
           +  F  ME  G +PD I ++I++  L + RR + A+  +  + K   + ++  Y  ++ G
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+     +A R+F+ + +  ++    T++I+IDAL + G+   A D+F      G  PN
Sbjct: 518 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  +    +     E++ Q++  M+  GC  D+   NF++    + G++  A   L+
Sbjct: 578 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 637

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
            +  K  +  AST ++    +S  G     HR
Sbjct: 638 MIDEKHFSLEASTASLFIDLLSG-GKYQEYHR 668


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 184/373 (49%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   + HF D + ++  ++   ++  L+    + G    A+     +E+    P
Sbjct: 214 LKGEVKK---SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRP 270

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D + ++ +I  LC+ +  +EA  F+  +  +   PDVI Y+ L+ G+C AG +  A  + 
Sbjct: 271 DVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLL 330

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I P+VYTY+I+IDALC+ G++  A ++   M + G +PN +T++ LM  +   
Sbjct: 331 NEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLV 390

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
                  Q+++ M +        +YN +I+  CK   +++A+ +L  M+ K   PN  T+
Sbjct: 391 GEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTY 450

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + K G +  A  +  ++       + +TY  L+     +++ D  + L  +M+E
Sbjct: 451 NSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKE 510

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             ++PN  TY  LI   C      NA K  + ++ + C     + Y +++  L + G L 
Sbjct: 511 RGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYT-YNVMIGGLCKEGMLD 569

Query: 516 KHEELVEKMVDRG 528
           +   +  KM D G
Sbjct: 570 EALAMKSKMEDNG 582



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 176/357 (49%), Gaps = 5/357 (1%)

Query: 139 TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           + RP+ V    +Y+ +I+   K +  + A+ F   M SR +   V T+S L+  +  AG 
Sbjct: 267 STRPDVV----MYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQ 322

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTN 257
              A    N M      PD   ++I+I  LC++ +  EA++    + K+  +P+V+ Y+ 
Sbjct: 323 LMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYST 382

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+ G+C  G +  A+++F  M    + P+V +Y+I+I+ LC+   +  A ++  EML   
Sbjct: 383 LMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKN 442

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN++T+N+L+    K+ R    L +  ++   G  AD ITY  L+D  CK+  L+ AI
Sbjct: 443 VVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAI 502

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            +   M  +G  PN  T+  +   + K   +  A +++  +    C  +  TYN+++   
Sbjct: 503 ALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGL 562

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                 D  L +K +ME+N   P+  T+ I+I         + A K + EMI +  L
Sbjct: 563 CKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 180/389 (46%), Gaps = 12/389 (3%)

Query: 142 PEFVHS-PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           P + HS P   H++++ A  V QF+       ++  RN    ++ F  ++   V+     
Sbjct: 99  PFYFHSQPPSIHDVVHDA--VSQFN------GMLLMRNTPSIIE-FGKILGSLVKMKHFP 149

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLV 259
            A+    +ME  G  PD +  SI+I+  C   + + + S     LK  ++P+ I+ T L+
Sbjct: 150 TAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLM 209

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           +G C  G + ++     ++   G Q N  +Y  +++ LC+ G+   A  +   + +    
Sbjct: 210 KGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTR 269

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ + +N ++    K     +    Y +M   G   D ITY+ LI   C  G+L  A  +
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSL 329

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           LN M  K  NP+  T+ ++   + K G +  A  + G M     +PN VTY+ LM  +  
Sbjct: 330 LNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCL 389

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                   ++   M + EV P+V +Y I+I   C     + A   +REM+ +  + P + 
Sbjct: 390 VGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVV-PNTV 448

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y  ++  L ++G++    +L++++  RG
Sbjct: 449 TYNSLIDGLCKSGRITSALDLMKELHHRG 477



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 116/301 (38%), Gaps = 56/301 (18%)

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS----- 336
           GI PN+ T SI+I+ L   GQ+  +  V  ++L++G +PNSIT   LM+   + +     
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65

Query: 337 ----RTEKVL-----QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI---------- 377
               R+ + L      + + +          T+ F    H +   + D +          
Sbjct: 66  MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYF--HSQPPSIHDVVHDAVSQFNGM 123

Query: 378 -------------KVLNSMVRKGCNPNA----------------STFNMIFRCISKLGDV 408
                        K+L S+V+    P A                 T +++  C   LG +
Sbjct: 124 LLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQM 183

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             +  + GK+  L  +PNT+    LM+           L    ++     + N  +Y  L
Sbjct: 184 AFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTL 243

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C +G    A K +R MIE++  +P   +Y  ++  L +   + +  +   +M  RG
Sbjct: 244 LNGLCKIGETRCAIKLLR-MIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG 302

Query: 529 F 529
            
Sbjct: 303 I 303



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  PN  T +++  C+  LG +  +  + GK+  L  +PN++T   LM+       T  
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMK-----GETRC 59

Query: 446 VLKLKKEMEENEVEP 460
            +KL + +E+    P
Sbjct: 60  AIKLPRMIEDRSTRP 74


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 189/376 (50%), Gaps = 2/376 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++N   +  Q  LA  F+  M     E  + TF  L+  + R     +A++ F+RM E G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P+ + ++ +I  LC+ ++   A    + ++ D   PD + Y +L+ G C +G   +A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R+   M    I P+V+T++ +IDA  + G+I+ A +++ EM+    +P+ +T++ L+   
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
              SR ++  Q++  M   GC  D +TY+ LI+ +CK  K+E  +K+   M ++G   N 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+ ++ +   + G +N A  ++  M      PN +TYN+L+     +   +  L +  +
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M+++ ++ ++ TY I+I   C  G   +A+  +   +  K L P    Y  ++  L + G
Sbjct: 422 MQKSGMDADIVTYNIIIRGMCKAGEVADAWD-LYCSLNLKGLTPDIWTYTAMMLGLYKKG 480

Query: 513 QLQKHEELVEKMVDRG 528
              + + L  KM + G
Sbjct: 481 LRGEADALFRKMKEDG 496



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 169/331 (51%), Gaps = 2/331 (0%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
            ++ + +M+  G   +    +I+++  CR  + S A SF   + K   EPD++ + +L+ 
Sbjct: 100 VIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLN 159

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+CR   I +A  +F  M   G +PNV  Y+ +ID LC+  Q+  A D+   M   G  P
Sbjct: 160 GFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRP 219

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +++T+N+L+     + R +   ++ + M +     D  T+N LID   K+G++ +A ++ 
Sbjct: 220 DAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELY 279

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+R+  +P+  T++++   +     ++ A +M+G M    C P+ VTY+IL+  +  S
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKS 339

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
           K  +  +KL  EM +  V  N  TY +LI  YC  G  N A +  + M+    + P    
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG-VPPNIIT 398

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           Y ++L  L   G+++K   ++  M   G  A
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKSGMDA 429



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 152/313 (48%), Gaps = 5/313 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  +     L +L+       RP+ V     Y+ +I+      ++D A   +  M
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEVDGIRPDAVT----YNSLISGLCNSGRWDDATRMVSCM 247

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             R +   V TF+ L+   V+ G  +EA   +  M      PD + +S++I  LC   R 
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA+  F  +  K   PDV+ Y+ L+ G+C++  +    ++F EM   G+  N  TY+++
Sbjct: 308 DEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVL 367

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I   CR G++  A ++F  M+  G  PN IT+N L+       + EK L +   M++ G 
Sbjct: 368 IQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           +AD +TYN +I   CK G++ DA  +  S+  KG  P+  T+  +   + K G    A  
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADA 487

Query: 414 MYGKMKDLKCEPN 426
           ++ KMK+    PN
Sbjct: 488 LFRKMKEDGILPN 500



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 159/322 (49%), Gaps = 3/322 (0%)

Query: 143 EFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           E  + P+  +Y+ +I+   K +Q D A   ++ M+   +     T++ L+     +G   
Sbjct: 179 EMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWD 238

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
           +A    + M +    PD   F+ +I    ++ R SEA+  ++ + +   +PD++ Y+ L+
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI 298

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C    + EAE++F  M   G  P+V TYSI+I+  C+  ++     +F EM + G  
Sbjct: 299 YGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            N++T+  L++ + +A +     +++  M   G   + ITYN L+   C +GK+E A+ +
Sbjct: 359 RNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVI 418

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L  M + G + +  T+N+I R + K G+V  A  +Y  +      P+  TY  +M     
Sbjct: 419 LADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYK 478

Query: 440 SKSTDMVLKLKKEMEENEVEPN 461
                    L ++M+E+ + PN
Sbjct: 479 KGLRGEADALFRKMKEDGILPN 500


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 184/363 (50%), Gaps = 2/363 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   +  +   A+  +  +     E    TF+ L++     G  +EAV   +RM E G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD + ++ +++ +CR    S A      ++++  + DV  Y+ ++   CR G I  A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F+EM+  GI+ +V TY+ ++  LC+ G+      +  +M+     PN ITFN L+ V 
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           VK  + ++  ++Y +M   G   + ITYN L+D +C   +L +A  +L+ MVR  C+P+ 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  + +    +  V+   +++  +       N VTY+IL+Q F  S    +  +L +E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  + V P+V TY IL+   C  G    A +   ++ + K +  G  +Y  +++ + + G
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTIIEGMCKGG 487

Query: 513 QLQ 515
           +++
Sbjct: 488 KVE 490



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 185/367 (50%), Gaps = 2/367 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
            + +QF+L   F   ++   +   + T +I++  + R      A     ++ + G  PD 
Sbjct: 99  ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             F+ +I  L  + + SEA    D + ++  +PDV+ Y ++V G CR+G+ S A  + R+
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   ++ +V+TYS +ID+LCR G I  A  +F EM   G + + +T+N+L+R   KA +
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
                 +   M       + IT+N L+D   K+GKL++A ++   M+ +G +PN  T+N 
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +         ++ A+ M   M   KC P+ VT+  L++ +   K  D  +K+ + + +  
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +  N  TY IL+  +C  G    A +  +EM+    L P    Y ++L  L   G+L+K 
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKA 457

Query: 518 EELVEKM 524
            E+ E +
Sbjct: 458 LEIFEDL 464



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 195/411 (47%), Gaps = 40/411 (9%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L GKV +   A   +D M     +  V T++ +V    R+G  + A+    +MEE     
Sbjct: 170 LEGKVSE---AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D   +S +I  LCR      A S F  ++ K  +  V+ Y +LVRG C+AG  ++   + 
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           ++M    I PNV T+++++D   + G++  A++++ EM+  G  PN IT+N LM  +   
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
           +R  +   + + M R  C  D +T+  LI  +C   +++D +KV  ++ ++G   NA T+
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           +++ +   + G +  A  ++ +M      P+ +TY IL+     +   +  L++ +++++
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466

Query: 456 NE-----------------------------------VEPNVNTYRILITMYCGMGHWNN 480
           ++                                   V+PNV TY ++I+  C  G  + 
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           A   +R+M EE    P    Y  +++   R G L    +L+E+M   GF+A
Sbjct: 527 ANILLRKM-EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 167/322 (51%), Gaps = 1/322 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++    K  +++     +  M SR +   V TF++L+  +V+ G   EA   +  M 
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P+ I ++ ++   C + R SEA +  D + ++K  PD++ +T+L++G+C    + 
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +  +VFR +   G+  N  TYSI++   C+ G+I  A ++F EM+  G  P+ +T+  L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + EK L+++  +++   +   + Y  +I+  CK GK+EDA  +  S+  KG  
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+ ++   + K G ++ A+ +  KM++    PN  TYN L++            KL
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565

Query: 450 KKEMEENEVEPNVNTYRILITM 471
            +EM+      + ++ +++I M
Sbjct: 566 IEEMKSCGFSADASSIKMVIDM 587



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 148/358 (41%), Gaps = 69/358 (19%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + ++ +  P ++ ++       R    +      +++++ GI  N+YT +I+I+  CR
Sbjct: 76  FQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCR 135

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C +   A+ V  +++++G EP++ TFN L++      +  + + + ++M   GC+ D +T
Sbjct: 136 CCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVT 195

Query: 360 YN-----------------------------------FLIDCHCKDGKLEDAIKVLNSMV 384
           YN                                    +ID  C+DG ++ AI +   M 
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG   +  T+N + R + K G  N    +   M   +  PN +T+N+L+ +F       
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC----------- 493
              +L KEM    + PN+ TY  L+  YC     + A   +  M+  KC           
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 494 -----------------------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                                  L   +  Y +++Q   ++G+++  EEL ++MV  G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITFNNL 328
           +A  +F+EM  +   P++  +S    A+ R  Q     D F + LE+ G   N  T N +
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNIM 129

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +  +T     V  ++ +LG E DT T+N LI     +GK+ +A+ +++ MV  GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N I   I + GD + A  +  KM++   + +  TY+ ++         D  + 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L KEME   ++ +V TY  L+   C  G WN+    +++M+  + + P    + ++L   
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVF 308

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            + G+LQ+  EL ++M+ RG +
Sbjct: 309 VKEGKLQEANELYKEMITRGIS 330



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 38/198 (19%)

Query: 370 DGKLEDAIKVLNSMVRK-----------------------------------GCNPNAST 394
           D K +DAI +   M+R                                    G   N  T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDMVLKLKKEM 453
            N++  C  +      A+ + GK+  L  EP+T T+N L++ +F   K ++ V+ L   M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV-LVDRM 184

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            EN  +P+V TY  ++   C  G  + A   +R+M EE+ +K     Y  ++  L R G 
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGC 243

Query: 514 LQKHEELVEKMVDRGFTA 531
           +     L ++M  +G  +
Sbjct: 244 IDAAISLFKEMETKGIKS 261


>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
 gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
          Length = 786

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 178/402 (44%), Gaps = 6/402 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMK-SRNVEITVDTFSIL 189
            L+   W  A  E          ++   G+  Q D     +D M       + V  ++ +
Sbjct: 122 ALALLRWAGA--EGAADASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTV 179

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK- 247
           +    RAG    AV  F  +   G AP  + +++V+ +  R  R+     +  D ++   
Sbjct: 180 LHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAG 239

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            EPD    + ++   CR G + EA   F ++K  G  P V TY+ ++    + G  T A 
Sbjct: 240 VEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEAL 299

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            V  EM + GC+P+++T+N L   + +A   E+  +  + M   G   +  TYN ++  +
Sbjct: 300 RVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAY 359

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
              GK+++A+ + + M + GC PN +T+N I   + K         M G+M    C PN 
Sbjct: 360 GNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNR 419

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VT+N ++ +       D V ++ + M+   VE + +TY  LI  Y   G   NA+K   E
Sbjct: 420 VTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNE 479

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           M       P  + Y  +L  L R G     + +V KM  +GF
Sbjct: 480 MTSAG-FAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGF 520



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 2/367 (0%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A  F + +K+R     V T++ L++ + +AG   EA+     ME+ GC PD + ++ +
Sbjct: 261 DEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNEL 320

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
                R     EA    D++  K   P+   Y  ++  +   G + EA  +F +MK +G 
Sbjct: 321 AGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGC 380

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            PNV TY+ ++  L +  + T   ++  EM   GC PN +T+N ++ V  K    + V +
Sbjct: 381 VPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTR 440

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           V   MK  G E    TYN LI  + + G   +A K+ N M   G  P  +T+N +   +S
Sbjct: 441 VLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLS 500

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           + GD + A  +  KM+    +PN  +Y++L+Q +A   +   +  ++KE+    V P+  
Sbjct: 501 RQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWV 560

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
             R L+             K  +E ++ +   P   ++  +L    + G   K  E+ + 
Sbjct: 561 ILRTLVIANFKCRRLGGIEKAFQE-VKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDS 619

Query: 524 MVDRGFT 530
           +   G +
Sbjct: 620 IKQSGLS 626



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 169/341 (49%), Gaps = 1/341 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ M+ + GK    D     ++ MKS  VE++ DT++ L+  Y R G    A   +N M 
Sbjct: 422 WNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMT 481

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G AP    ++ ++++L R+   S AQS    ++ K F+P+   Y+ L++ + + GNI+
Sbjct: 482 SAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIA 541

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             + + +E+    + P+      ++ A  +C ++      F E+   G  P+ + FN+++
Sbjct: 542 GIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSML 601

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            ++ K     KV ++++ +K+ G   D ITYN L+D + K  +  +A K+LN +      
Sbjct: 602 SMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVK 661

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  ++N +     K G +  A R+  +M      P  VTY+ L+  +A+ +      ++
Sbjct: 662 PDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREV 721

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
              M ++ ++P   TYR ++  YC    +  A  ++ E+ E
Sbjct: 722 INYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSE 762



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/411 (21%), Positives = 178/411 (43%), Gaps = 37/411 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+     +   ++ A   +D M S+ +     T++ ++  Y   G   EA+  F++M+
Sbjct: 317 YNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMK 376

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC P+   ++ ++ +L +K R +        + +    P+ + +  ++    + G   
Sbjct: 377 KSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMED 436

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
              RV   MK  G++ +  TY+ +I A  RCG  T A  ++ EM   G  P   T+N L+
Sbjct: 437 YVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALL 496

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE--DAIK--------- 378
            V  +         + ++M+  G + +  +Y+ L+ C+ K G +   DAI+         
Sbjct: 497 NVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVF 556

Query: 379 ----VLNSMV--------------------RKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
               +L ++V                     +G NP+   FN +    +K G  +    +
Sbjct: 557 PSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEI 616

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  +K     P+ +TYN LM M+A    +    K+  +++ ++V+P+V +Y  +I  +C 
Sbjct: 617 FDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCK 676

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            G    A + + EMI +  + P    Y  ++          +  E++  M+
Sbjct: 677 QGLIKEAQRILSEMIADG-MAPCVVTYHTLVGGYASLEMFSEAREVINYMI 726


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 204/417 (48%), Gaps = 21/417 (5%)

Query: 130 QVLSFFNWV---TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           + L FF+ +   T RP  V    L + +    G++ +   A   +D M    ++ T  T+
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCR-EGRIVE---AVALLDRMMEDGLQPTQITY 222

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
             +V    + G    A++   +MEE     P+ + +S +I  LC+  R S+AQ+ F  ++
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 246 DK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           +K   PD+  Y +++ G+C +G  S+AE++ +EM    I P+V TY+ +I+A  + G+  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A +++ EML  G  PN+IT+N+++    K  R +    ++  M   GC  D  T+  LI
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D +C   +++D +++L+ M R+G   N  T+N +      +GD+N A  +  +M      
Sbjct: 403 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 462

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEE-----------NEVEPNVNTYRILITMYC 473
           P+ VT N L+     +      L++ K M++           N VEP+V TY ILI    
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 522

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             G +  A +   EM   + + P +  Y  ++  L +  +L +  ++   M  + F+
Sbjct: 523 NEGKFLEAEELYEEM-PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS 578



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 196/448 (43%), Gaps = 25/448 (5%)

Query: 102 STAHSISPSTVRHVIEK----SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI-- 155
           S A      ++R  + K    SC    G   L++ S F+ +    + +   DL+ +M+  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI---DLFSDMLRS 73

Query: 156 ----------NLAGKVRQF---DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
                      L G V +    DL       M+ + +   + +F+IL++ +        A
Sbjct: 74  RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA 133

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
           +  F ++ + G  PD + F+ ++  LC + R SEA  FF  + +    P+V+ +T L+ G
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNG 193

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEP 320
            CR G I EA  +   M   G+QP   TY  ++D +C+ G    A ++  +M EV    P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N + ++ ++    K  R      ++ +M+  G   D  TYN +I   C  G+  DA ++L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ +  +P+  T+N +     K G    A  +Y +M      PNT+TYN ++  F   
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D    +   M      P+V T+  LI  YCG    ++  + + EM   + L   +  
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM-PRRGLVANTVT 432

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y  ++      G L    +L ++M+  G
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSG 460



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 164/368 (44%), Gaps = 14/368 (3%)

Query: 136 NWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           N  T   E    PDL  Y+ MI       ++  A   +  M  R +   V T++ L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
           V+ G   EA   ++ M   G  P+ I ++ +I   C++ R   A+  F  +  K   PDV
Sbjct: 336 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 395

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             +T L+ G+C A  I +   +  EM   G+  N  TY+ +I   C  G +  A D+  +
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTITYN 361
           M+  G  P+ +T N L+       + +  L+++  M++            G E D +TYN
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 515

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI     +GK  +A ++   M  +G  P+  T++ +   + K   ++ A +M+  M   
Sbjct: 516 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 575

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN VT+N L+  +  +   D  L+L  EM    +  +   Y  LI  +  +G+ N A
Sbjct: 576 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 635

Query: 482 YKYIREMI 489
               +EMI
Sbjct: 636 LDIFQEMI 643



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 161/347 (46%), Gaps = 19/347 (5%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +IN   K  +F  A    D M  R +     T++ ++  + +      A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
            F  M   GC+PD   F+ +I   C  +R  +       + +     + + Y  L+ G+C
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 441

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV------- 316
             G+++ A  + ++M  +G+ P++ T + ++D LC  G++  A ++F  M +        
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501

Query: 317 ----GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
               G EP+ +T+N L+   +   +  +  ++Y +M   G   DTITY+ +ID  CK  +
Sbjct: 502 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           L++A ++  SM  K  +PN  TFN +     K G V+    ++ +M       + + Y  
Sbjct: 562 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 621

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           L+  F    + +  L + +EM  + V P+  T R ++T     G W+
Sbjct: 622 LIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT-----GFWS 663



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/428 (21%), Positives = 187/428 (43%), Gaps = 29/428 (6%)

Query: 54  PEETLISEKFHSLIKDHHRKNPNP--SSNSNPSLNPD-FTIPSLSLGFS----------- 99
           P   + S    SL KD    +     +      + PD FT  S+ +GF            
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 100 -QISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLA 158
            Q      ISP  V +    +  V+ G    +    ++ +  R   + +   Y+ MI+  
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEG-KFFEAAELYDEMLPRG-IIPNTITYNSMIDGF 370

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
            K  + D A     LM ++     V TF+ L+  Y  A    + +   + M   G   + 
Sbjct: 371 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ +I   C     + A      +      PD++    L+ G C  G + +A  +F+ 
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 490

Query: 278 MKMA-----------GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
           M+ +           G++P+V TY+I+I  L   G+   A +++ EM   G  P++IT++
Sbjct: 491 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +++    K SR ++  Q++  M       + +T+N LI+ +CK G+++D +++   M R+
Sbjct: 551 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   +A  +  +     K+G++NGA  ++ +M      P+T+T   ++  F + +  +  
Sbjct: 611 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 670

Query: 447 LKLKKEME 454
           + + ++++
Sbjct: 671 VAMLEDLQ 678


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 182/366 (49%), Gaps = 9/366 (2%)

Query: 171 IDLMKSRNVEITVD-------TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           ID MKS  +E+  D       T + +V  Y + G   EA    +++ + G + D   ++ 
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTS 244

Query: 224 VISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I   CR +    A + F S+ +K    + + YTNL+ G+C A  + EA ++F +M    
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P V TY+++I ALC+ G+ T A ++F EM E  C+PN  T+  L+    + S  +   
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           ++ N M   G     +TYN LID +CK G    A+++L+ M    C+PNA T+N +    
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            +  +++ A  +  KM + K +PN VTYNIL+             KL   M E+ + P+ 
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY + I   C  G    A + + E ++EK +K    +Y  ++    + G++     L++
Sbjct: 485 WTYSVFIDTLCKRGLVEEA-RSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLD 543

Query: 523 KMVDRG 528
           KM+  G
Sbjct: 544 KMLSAG 549



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 191/429 (44%), Gaps = 37/429 (8%)

Query: 109 PSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           PS V +  +I+  C        L++LS        P    +   Y+E+I    + +    
Sbjct: 377 PSVVTYNALIDGYCKKGLSASALEILSLMESNNCSP----NARTYNELILGFCRGKNIHK 432

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  M  R ++  V T++IL+    + G    A    + M E G  PD+  +S+ I 
Sbjct: 433 AMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFID 492

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++    EA+S F+SLK+K  + + ++Y+ L+ G+C+ G +S+   +  +M  AG  P
Sbjct: 493 TLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVP 552

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  TY+ +ID  C+      A  +   M++   EP + T+  L+   +K    ++   ++
Sbjct: 553 NSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMF 612

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM   G   D   Y   I  +C  G+L+DA  ++  M  KG  P+   + +      + 
Sbjct: 613 DQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRF 672

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM-------------------- 445
           G ++GA  +  +M ++ CEP+  TY+ L++  + +K  ++                    
Sbjct: 673 GSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSN 732

Query: 446 ---------VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                     L L  +M E+   PN NTY   IT  C +G    A++    M +EK   P
Sbjct: 733 CWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM-KEKGQSP 791

Query: 497 GSSVYEMVL 505
              +Y  +L
Sbjct: 792 NEDIYNSLL 800



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 4/350 (1%)

Query: 181 ITVDTFSI--LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           +++DTF+   L+  Y R      A   F  M   GC  ++++++ +I   C  RR  EA 
Sbjct: 235 LSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEAL 294

Query: 239 SFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             F  + +D   P V  YT ++   C+ G  +EA  +F+EM     QPNV+TY+++I +L
Sbjct: 295 KLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSL 354

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C       A  +   MLE G  P+ +T+N L+  + K   +   L++ + M+   C  + 
Sbjct: 355 CEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNA 414

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TYN LI   C+   +  A+ +L+ M+ +   PN  T+N++     K GD+  A+++   
Sbjct: 415 RTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSL 474

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M +    P+  TY++ +         +    L + ++E  ++ N   Y  LI  YC +G 
Sbjct: 475 MNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK 534

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            ++    + +M+   C+ P S  Y  ++    +    ++   LV+ M+ R
Sbjct: 535 VSDGRFLLDKMLSAGCV-PNSITYNSLIDGYCKEKNFKEARLLVDIMIKR 583



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 176/414 (42%), Gaps = 37/414 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   + R+ D A      M   N   TV T+++++    + G   EA++ F  M 
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMT 336

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAG--- 266
           E  C P+   ++++I  LC      +A+   + + +K   P V+ Y  L+ G+C+ G   
Sbjct: 337 EKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396

Query: 267 --------------------------------NISEAERVFREMKMAGIQPNVYTYSIVI 294
                                           NI +A  +  +M    +QPNV TY+I+I
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
              C+ G +  A+ + + M E G  P+  T++  +    K    E+   ++  +K  G +
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
           A+ + Y+ LID +CK GK+ D   +L+ M+  GC PN+ T+N +     K  +   A  +
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
              M     EP   TY IL+         D    +  +M      P+V  Y   I  YC 
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            G   +A   I +M   K + P + +Y + +    R G +     ++++M + G
Sbjct: 637 HGRLKDAEVLICKM-NAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 132/281 (46%), Gaps = 1/281 (0%)

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           KF+  +  Y  L+    R   I E + V+ EM    + PN++T + +++  C+ G +  A
Sbjct: 164 KFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA 223

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
               +++++ G   ++ T+ +L+  + +    +    ++  M   GC  + ++Y  LI  
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG 283

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+  ++++A+K+ + M    C P   T+ +I   + +LG    A  M+ +M +  C+PN
Sbjct: 284 FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TY +L+       + D   K+   M E  + P+V TY  LI  YC  G   +A + + 
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILS 403

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            M    C  P +  Y  ++    R   + K   L+ KM++R
Sbjct: 404 LMESNNC-SPNARTYNELILGFCRGKNIHKAMSLLHKMLER 443



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 150/357 (42%), Gaps = 34/357 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K + F  A   +D+M  R++E   DT++IL+   ++     +A   F++M 
Sbjct: 557 YNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQML 616

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   ++  I   C   R  +A+     +  K   PD ++YT  +  + R G+I 
Sbjct: 617 STGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSID 676

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALC-----------------------------RC 300
            A  + + M   G +P+ YTYS +I  L                              R 
Sbjct: 677 GAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRR 736

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
                  D+F +M E GC PN+ T+   +    K    E   ++++ MK  G   +   Y
Sbjct: 737 VDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIY 796

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N L+ C C+ G   +AI+ L+ M+     P+  +  ++   +   G+   A R++     
Sbjct: 797 NSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSF-- 854

Query: 421 LKCEPN--TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
           L+CE N   + + +L+        +D    L   ME    + +  TY +LI  + G+
Sbjct: 855 LQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGI 911



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/266 (19%), Positives = 94/266 (35%), Gaps = 30/266 (11%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL----- 228
           M ++ +      +++ +  Y R G    A     RM E GC P    +S +I  L     
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKP 709

Query: 229 -----------------------CRKRRASE-AQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
                                  C +R   E     F  + +    P+   Y   + G C
Sbjct: 710 KEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLC 769

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G +  A R+F  MK  G  PN   Y+ ++   C+ G    A      M+E    P+  
Sbjct: 770 KVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLD 829

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +   L+         EK  +V+    +     D + +  LID   K G  +    +   M
Sbjct: 830 SCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIM 889

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVN 409
             +GC  +  T++M+      + +++
Sbjct: 890 ETQGCQIHPKTYSMLIEGFDGIQEID 915


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 175/327 (53%), Gaps = 4/327 (1%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAG 266
           R+ E   AP+   F+I+I  LC++   +EA++    +K     PDV+ Y +L+ G+ + G
Sbjct: 184 RLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCG 243

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            + E E++  EM+  G +P+V TY+ +++  C+ G++ RA+  FAEM   G   N +TF+
Sbjct: 244 ELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFS 303

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
             +    K     + ++++ QM+  G + + +TY  L+D  CK G+L+DA+ + N MV++
Sbjct: 304 TFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ 363

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N  T+ ++   + K G V  A  ++  M+      N + Y  L+      K+++  
Sbjct: 364 GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERA 423

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L L  EM++  +E +V+ Y  LI   C +   + A   + +M +E  LKP + +Y  ++ 
Sbjct: 424 LSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM-DECGLKPNNVIYTNIMD 482

Query: 507 QLRRAGQLQKHEELVEKMVDRGFTARP 533
              +A +  +   L++KM+D GF  RP
Sbjct: 483 ACFKARKESEAIALLQKMMDSGF--RP 507



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 193/416 (46%), Gaps = 44/416 (10%)

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
           H ++ LA + R  +LAW   + + + NV     TF+I++    + G  AEA     RM+ 
Sbjct: 168 HILLCLA-RERSSELAWRLFEQLPAPNVF----TFNIMIDFLCKEGDLAEARALLARMKA 222

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISE 270
            GC+PD + ++ +I    +     E +     ++     PDV+ Y  LV  +C+ G +  
Sbjct: 223 IGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMER 282

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A   F EMK  G+  NV T+S  +DA C+ G +  A  +FA+M   G +PN +T+  L+ 
Sbjct: 283 AYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVD 342

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL----------------- 373
              KA R +  L + N+M + G   + +TY  L+D  CK+GK+                 
Sbjct: 343 GTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRA 402

Query: 374 ------------------EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
                             E A+ +L+ M  KG   + S +  +   +  L  ++ A  + 
Sbjct: 403 NELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL 462

Query: 416 GKMKDLKCEPNTVTY-NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
            KM +   +PN V Y NI+   F   K ++ +  L+K M+     PN+ TY  L+   C 
Sbjct: 463 NKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG-FRPNIVTYCALVDGLCK 521

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            G  + A  +  +M++   L+P    Y  ++  L + G+L K   L+++M+D+G +
Sbjct: 522 AGSIDEAISHFNKMVDLG-LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMS 576



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 176/390 (45%), Gaps = 12/390 (3%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +I+  GK  + +     +  M+       V T++ LV  + + G    A  
Sbjct: 226 SPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYS 285

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F  M+  G   + + FS  +   C+     EA   F  ++ K  +P+ + YT LV G C
Sbjct: 286 YFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTC 345

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG + +A  +  EM   G+  NV TY++++D LC+ G++  A DVF  M   G   N +
Sbjct: 346 KAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANEL 405

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +  L+  H     +E+ L + ++MK  G E D   Y  LI   C   KL++A  +LN M
Sbjct: 406 LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM 465

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              G  PN   +  I     K    + A  +  KM D    PN VTY  L+     + S 
Sbjct: 466 DECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSI 525

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  +    +M +  +EPNV  Y  L+   C  G  + A   + EMI++     G S+  +
Sbjct: 526 DEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDK-----GMSLDNV 580

Query: 504 VLQQLR----RAGQLQKHEELVEKMVDRGF 529
           V   L     + G LQ    L  KM++ G 
Sbjct: 581 VCTSLMDGHLKQGNLQDAFALKAKMINSGL 610



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 187/420 (44%), Gaps = 41/420 (9%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP+ V     Y+ ++N   K  + + A+ +   MK   V   V TFS  V  + + G+  
Sbjct: 261 RPDVVT----YNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLV 259
           EA+  F +M   G  P+++ ++ ++   C+  R  +A    + +  +  P +V+ YT LV
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLV 376

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPN--VYT---------------------------- 289
            G C+ G ++EAE VFR M+ AGI+ N  +YT                            
Sbjct: 377 DGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGME 436

Query: 290 -----YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                Y  +I  LC   ++  A  +  +M E G +PN++ + N+M    KA +  + + +
Sbjct: 437 LDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIAL 496

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +M   G   + +TY  L+D  CK G +++AI   N MV  G  PN   +  +   + K
Sbjct: 497 LQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCK 556

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G ++ A  +  +M D     + V    LM       +      LK +M  + ++ ++  
Sbjct: 557 NGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYG 616

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y   +  +C +     A + + EMIE   + P + VY  ++ + ++ G +++   L  +M
Sbjct: 617 YTCFVWGFCNLNMIQEAREVLSEMIENG-ITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 135/273 (49%), Gaps = 1/273 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           LY  +I+     +  + A   +  MK + +E+ V  +  L+          EA    N+M
Sbjct: 406 LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM 465

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           +E G  P+ + ++ ++    + R+ SEA +    + D  F P+++ Y  LV G C+AG+I
Sbjct: 466 DECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSI 525

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA   F +M   G++PNV  Y+ ++D LC+ G++ +A  +  EM++ G   +++   +L
Sbjct: 526 DEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSL 585

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           M  H+K    +    +  +M   G + D   Y   +   C    +++A +VL+ M+  G 
Sbjct: 586 MDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGI 645

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            P+A  +N +     KLG++  A  +  +M+ L
Sbjct: 646 TPDAVVYNCLINKCQKLGNMEEAAILQNEMESL 678



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 145/340 (42%), Gaps = 36/340 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K  + D A    + M  + V + V T+++LV    + G  AEA   F  ME
Sbjct: 337 YTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLME 396

Query: 211 EYGCAPDKIAFSIVISI-----------------------------------LCRKRRAS 235
             G   +++ ++ +I                                     LC  ++  
Sbjct: 397 RAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLD 456

Query: 236 EAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA+S  + + +   +P+ ++YTN++    +A   SEA  + ++M  +G +PN+ TY  ++
Sbjct: 457 EAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALV 516

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           D LC+ G I  A   F +M+++G EPN   +  L+    K  R +K + + ++M   G  
Sbjct: 517 DGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMS 576

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D +    L+D H K G L+DA  +   M+  G   +   +         L  +  A  +
Sbjct: 577 LDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREV 636

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
             +M +    P+ V YN L+       + +    L+ EME
Sbjct: 637 LSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 81/224 (36%), Gaps = 67/224 (29%)

Query: 371 GKLEDAIKVLNSMVR--------KGCN------------------------PNASTFNMI 398
           G L+DA+  L + VR        + CN                        PN  TFN++
Sbjct: 142 GLLDDAVLAL-ARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIM 200

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + K GD+  A  +  +MK + C P+ VTYN L+  +      + V KL  EM     
Sbjct: 201 IDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGC 260

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEE--------------------------- 491
            P+V TY  L+  +C  G    AY Y  EM  E                           
Sbjct: 261 RPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMK 320

Query: 492 -------KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                  K +KP    Y  ++    +AG+L     L  +MV +G
Sbjct: 321 LFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQG 364


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 186/376 (49%), Gaps = 5/376 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I++ GK  +  +A   ++ +      + V  ++ L+   V  G   EAV  F +MEE G
Sbjct: 4   IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 214 CAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI-SE 270
           C P  I +++++++  +     ++ +  F+ +K+    PD   Y  L+   CR G++  E
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLIT-CCRRGSLHEE 122

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A  VF++MK  G  P+  TY+ ++D   +  +   A +V  EM   GC P+ +T+N+L+ 
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            + +    ++ +++ NQM   G   D  TY  L+    + GK E A++V   M   GC P
Sbjct: 183 AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP 242

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N  TFN + +     G      +++ ++K+  C P+ VT+N L+ +F  +     V  + 
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           KEM+     P  +TY  LI+ Y   G ++ A    + M+E   + P  S Y  VL  L R
Sbjct: 303 KEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAG-ITPDLSTYNAVLAALAR 361

Query: 511 AGQLQKHEELVEKMVD 526
            G  ++ E++  +M D
Sbjct: 362 GGLWEQSEKIFAEMKD 377



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 189/420 (45%), Gaps = 44/420 (10%)

Query: 151 YHEMINLAGKVRQFDLAWHFI----DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           Y+ ++N+ GK+    + W+ I    + MK+  V     T++ L+    R  L  EA   F
Sbjct: 71  YNVILNVYGKM---GMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVF 127

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRA 265
             M+  G  PDK+ ++ ++ +  + RR  EA      ++ +   P ++ Y +L+  + R 
Sbjct: 128 KDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARD 187

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + EA  +  +M   GI  +V+TY+ ++    R G+   A  VFAEM   GC+PN  TF
Sbjct: 188 GLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTF 247

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT-------------------------- 359
           N L+++H    +  ++++V+ ++K   C  D +T                          
Sbjct: 248 NALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307

Query: 360 ---------YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                    YN LI  + + G  + A+ +   M+  G  P+ ST+N +   +++ G    
Sbjct: 308 AGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQ 367

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           + +++ +MKD +C+PN +TY  L+  +A  K    +L L +E+    +EP+    + L+ 
Sbjct: 368 SEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVL 427

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +         A     E+ + K   P  S    +L    R     K  E++  M + GFT
Sbjct: 428 VNSKCDLLVEAEVAFLEL-KRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFT 486



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 172/383 (44%), Gaps = 4/383 (1%)

Query: 149 DLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           D++     L+G VR  + + A      M++   +  + TF+ L++ +   G  AE +  F
Sbjct: 208 DVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVF 267

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
             ++   C PD + ++ ++++  +    SE    F  +K   F P+   Y  L+  + R 
Sbjct: 268 EEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRC 327

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G+  +A  +++ M  AGI P++ TY+ V+ AL R G   ++  +FAEM +  C+PN +T+
Sbjct: 328 GSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTY 387

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
            +L+  +       ++L +  ++     E   +    L+  + K   L +A      + R
Sbjct: 388 CSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKR 447

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG +P+ ST N +     +       + +   M +    P+  TYN LM M + S++ + 
Sbjct: 448 KGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFER 507

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             ++ KE+    ++P+  +Y  +I  YC  G    A +   EM  E  L P    Y   +
Sbjct: 508 SEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEM-RESGLVPDVITYNTFV 566

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
                    +   ++V  M+  G
Sbjct: 567 ASYAADSMFEDAIDVVRYMIKHG 589



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 146/319 (45%), Gaps = 9/319 (2%)

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           DT++ L+  Y R G   +A+  + RM E G  PD   ++ V++ L R     +++  F  
Sbjct: 315 DTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAE 374

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +KD + +P+ + Y +L+  +     I     +  E+    I+P+      ++    +C  
Sbjct: 375 MKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDL 434

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A   F E+   G  P+  T N ++ ++ +     K  ++ N M   G      TYN 
Sbjct: 435 LVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNS 494

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  H +    E + +VL  ++ KG  P+  ++N +     + G +  A R++ +M++  
Sbjct: 495 LMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESG 554

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN  +  +A     +  + + + M ++  +PN NTY  ++  YC   H ++A 
Sbjct: 555 LVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAI 614

Query: 483 KYIREM--------IEEKC 493
            +I  +         EEKC
Sbjct: 615 MFISSLHELDPHISREEKC 633



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 2/224 (0%)

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +++I  L + G+++ A  +  ++ + G   +   + +L+   V   R  + + V+ +M+ 
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVL-NSMVRKGCNPNASTFNMIFRCISKLGDVN 409
            GC+   ITYN +++ + K G   + IK L   M   G  P+  T+N +  C  +     
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++  MK +   P+ VTYN L+ ++  S+ T   +++ +EME N   P++ TY  LI
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           + Y   G    A +   +M+E   +      Y  +L    RAG+
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGG-INLDVFTYTTLLSGFVRAGK 224



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 2/183 (1%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F++L K +     + T + ++  Y R  +  +     N M E G  P    ++ ++ +  
Sbjct: 442 FLEL-KRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHS 500

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R      ++     +  K  +PD I Y  ++  +CR G + EA R+F EM+ +G+ P+V 
Sbjct: 501 RSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVI 560

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+  + +         A DV   M++ GC+PN  T+N+++  + K +  +  +   + +
Sbjct: 561 TYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSL 620

Query: 349 KRL 351
             L
Sbjct: 621 HEL 623


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 183/373 (49%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   A HF D + ++  ++   ++  L+    + G    A+    +++     P
Sbjct: 141 LKGQVKK---ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKP 197

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + +S +I  LC+ +  SEA   F  +  K    DV+ Y+ L+ G+C  G + EA  + 
Sbjct: 198 NVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLL 257

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I PNVYTY+I++DALC+ G++  A  V A ML+   +P+ IT++ LM  +   
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +K   V+N M  +G   D  TY  LI+  CK+  +++A+ +   M +K   P   T+
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           + +   + K G +     +  +M D     N +TY+ L+     +   D  + L  +M++
Sbjct: 378 SSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             + PN  T+ IL+   C  G   +A +  ++++  K        Y +++    + G L+
Sbjct: 438 QGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLL-TKGYHLNVYTYNVMIDGHCKQGLLE 496

Query: 516 KHEELVEKMVDRG 528
           +   ++ KM D G
Sbjct: 497 EALTMLSKMEDNG 509



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 178/366 (48%), Gaps = 8/366 (2%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           + +S  T+ + + K    R  I LLQ +   +    +P  V    +Y  +I+   K +  
Sbjct: 163 NQVSYGTLINGVCKIGDTRAAIKLLQKI---DGRLTKPNVV----MYSTIIDALCKYQLV 215

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
             A+     M  + +   V T+S L+  +   G   EA+   N M      P+   ++I+
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 225 ISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +  LC++ +  EA+S     LK   +PDVI Y+ L+ G+     + +A+ VF  M + G+
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P+V+TY+I+I+  C+   +  A ++F EM +    P  +T+++L+    K+ R   V  
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           + ++M   G  A+ ITY+ LID  CK+G L+ AI + N M  +G  PN  TF ++   + 
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K G +  A  ++  +       N  TYN+++         +  L +  +ME+N   P+  
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAV 515

Query: 464 TYRILI 469
           T+ I+I
Sbjct: 516 TFEIII 521



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 189/392 (48%), Gaps = 8/392 (2%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H+P +  ++++++   K++ +  A      ++ + ++  + T +IL+  +   G      
Sbjct: 55  HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
               ++ + G  PD +  + +I  LC K +  +A  F D  L   F+ + + Y  L+ G 
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV 174

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ G+   A ++ +++     +PNV  YS +IDALC+   ++ A+ +F+EM   G   + 
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T++ L+       + ++ + + N+M       +  TYN L+D  CK+GK+++A  VL  
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++    P+  T++ +      + +V  A  ++  M  +   P+  TY IL+  F  +K 
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-Y 501
            D  L L KEM +  + P + TY  LI   C  G     +  I EM +    +P + + Y
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG--QPANVITY 412

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
             ++  L + G L +   L  KM D+G   RP
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQGI--RP 442



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 5/260 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV++   A   + +M    V+  V T+S L+  Y       +A H FN M   G  PD 
Sbjct: 283 GKVKE---AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             ++I+I+  C+ +   EA + F  +  K   P ++ Y++L+ G C++G I     +  E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   G   NV TYS +ID LC+ G + RA  +F +M + G  PN+ TF  L+    K  R
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +   +V+  +   G   +  TYN +ID HCK G LE+A+ +L+ M   GC P+A TF +
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEI 519

Query: 398 IFRCISKLGDVNGAHRMYGK 417
           I   + K  D NG +  + K
Sbjct: 520 IIIALFK-KDENGGNVGFDK 538



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 3/257 (1%)

Query: 200  AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNL 258
            + AV   +R+E  G  PD    +I+I+  C   + +   S     LK  + PD I +T L
Sbjct: 943  STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTL 1002

Query: 259  VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
            + G C  G +++A     ++   G Q N  +Y  +I+ +C+ G    A  +  ++     
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062

Query: 319  EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            +P+ + +N ++    K     K   ++ +M   G  AD +TYN LI   C  GKL++AI 
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 379  VLNSMVRKGCNPNASTFNMIFRCISKLGD--VNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            +LN MV K  NPN  T+N++   + K G   ++ +  M  KM+D  C+ N VT+ I++  
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182

Query: 437  FATSKSTDMVLKLKKEM 453
                   D V KL  EM
Sbjct: 1183 LFEKDENDKVEKLLHEM 1199



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 3/263 (1%)

Query: 269  SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            S A  +   +++ GIQP+++T +I+I+  C  GQIT    + A++L+ G  P++ITF  L
Sbjct: 943  STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTL 1002

Query: 329  MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
            +       +  K L  ++++   G + + ++Y  LI+  CK G    AIK+L  +  +  
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062

Query: 389  NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             P+   +N I   + K   V+ A+ ++ +M       + VTYN L+  F         + 
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 449  LKKEMEENEVEPNVNTYRILITMYCGMGH--WNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            L  +M    + PNV TY IL+   C  G    + +   + +M +  C K  +  +E+++ 
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGC-KANAVTFEIIIS 1181

Query: 507  QLRRAGQLQKHEELVEKMVDRGF 529
             L    +  K E+L+ +M+ RG 
Sbjct: 1182 ALFEKDENDKVEKLLHEMIARGL 1204



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 121/232 (52%), Gaps = 3/232 (1%)

Query: 174  MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
            ++ + ++  + T +IL+  +   G          ++ + G  PD I F+ +I+ LC K +
Sbjct: 952  LELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQ 1011

Query: 234  ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             ++A  F D L    F+ + + Y  L+ G C+ G+   A ++ R++     +P+V  Y+ 
Sbjct: 1012 VNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNT 1071

Query: 293  VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
            +IDALC+   +++A+ +F EM   G   + +T+N L+       + ++ + + N+M    
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131

Query: 353  CEADTITYNFLIDCHCKDGK--LEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
               +  TYN L+D  CK+GK  L++++ +L+ M   GC  NA TF +I   +
Sbjct: 1132 INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 99/189 (52%), Gaps = 3/189 (1%)

Query: 163  QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
            Q + A HF D + ++  ++   ++  L+    + G    A+    +++     PD + ++
Sbjct: 1011 QVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYN 1070

Query: 223  IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
             +I  LC+ +  S+A   F  +  K    DV+ Y  L+ G+C  G + EA  +  +M + 
Sbjct: 1071 TIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK 1130

Query: 282  GIQPNVYTYSIVIDALCRCGQ--ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             I PNV TY+I++DALC+ G+  +  +  + ++M + GC+ N++TF  ++    +    +
Sbjct: 1131 TINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEND 1190

Query: 340  KVLQVYNQM 348
            KV ++ ++M
Sbjct: 1191 KVEKLLHEM 1199


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 182/363 (50%), Gaps = 2/363 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      F+IL+  Y + G   +A+ AF  M + G  PD +++S VI ILC
Sbjct: 365 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 424

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  R  +A   F+ +  +   P++I +T+L+ G C  G   + E +  EM   GI P+  
Sbjct: 425 KIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 484

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
             + ++D LC+ G++  A D F  ++ +G +PN +++N L+  +    + ++ ++ +++M
Sbjct: 485 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRM 544

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             +G   D+ TYN L++ + K+G++EDA+ +   M RK     A T N+I   + + G +
Sbjct: 545 VSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRI 604

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A  +Y KM D   +    TYN ++     +   D  L++ +++   E E +V T+ I+
Sbjct: 605 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIV 664

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I     +G  + A      M+    + P    Y ++++     G L++ ++L   M   G
Sbjct: 665 INALLKVGRIDEAKSLFSAMVLRGPV-PHVITYSLMIKSRIEEGLLEESDDLFLSMEKNG 723

Query: 529 FTA 531
             A
Sbjct: 724 CAA 726



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 166/327 (50%), Gaps = 5/327 (1%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF----EPDVIVYTNLVRG 261
           F RM E G  PD  +++ +I  LC ++++ EA      +         P+V+ Y+ ++ G
Sbjct: 153 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDG 212

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           + + G + +A  +F EM   G  P+V TYS +ID LC+   + +A  +   M + G  PN
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPN 272

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           + T+N ++R +    + E+ +++  +M   G + D +TY  LI  +CK G+  +A  V +
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
           SMVRKG  PN++ ++++    +  G +     +   M           +NIL+  +A   
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 392

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
           + D  +    EM +N + P+V +Y  +I + C +G   +A  +  +M+ E  L P    +
Sbjct: 393 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG-LSPNIISF 451

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
             ++  L   G+ +K EEL  +M++RG
Sbjct: 452 TSLIHGLCSIGEWKKVEELAFEMINRG 478



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 180/388 (46%), Gaps = 4/388 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+   K +  + A   +  M  + V     T++I++R Y   G   EAV  
Sbjct: 236 PDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRL 295

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
             +M   G  PD + + ++I   C+  R +EA+S FDS+  K + P+  +Y  L+ G+  
Sbjct: 296 LKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYAT 355

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +   +   M   GI      ++I+I A  + G + +A   F EM + G  P+ ++
Sbjct: 356 KGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVS 415

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ ++ +  K  R E  +  +NQM   G   + I++  LI   C  G+ +   ++   M+
Sbjct: 416 YSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMI 475

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G +P+A   N I   + K G V  A   +  +  +  +PN V+YN L+  +      D
Sbjct: 476 NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMD 535

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             +K    M    + P+  TY  L+  Y   G   +A    REM   K +K  +    ++
Sbjct: 536 ESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMF-RKDVKFCAITSNII 594

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           L  L +AG++    EL  KMVDRG   R
Sbjct: 595 LHGLFQAGRIVAARELYMKMVDRGTQLR 622



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 158/318 (49%), Gaps = 2/318 (0%)

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISE 270
           Y C+P+ +++S +I    ++    +A   FD +  + F PDV+ Y++L+ G C+A  +++
Sbjct: 197 YNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNK 256

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           AE + + M   G+ PN  TY+I+I   C  GQ+  A  +  +M   G +P+ +T+  L++
Sbjct: 257 AEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQ 316

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            + K  R  +   V++ M R G + ++  Y+ L+  +   G L D   +L+ M+R G   
Sbjct: 317 YYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPF 376

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
               FN++    +K G V+ A   + +M+     P+ V+Y+ ++ +       +  +   
Sbjct: 377 EHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHF 436

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            +M    + PN+ ++  LI   C +G W    +   EMI  + + P +     ++  L +
Sbjct: 437 NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMI-NRGIHPDAIFMNTIMDNLCK 495

Query: 511 AGQLQKHEELVEKMVDRG 528
            G++ + ++  + ++  G
Sbjct: 496 EGRVVEAQDFFDMVIHIG 513



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 151/321 (47%), Gaps = 20/321 (6%)

Query: 227 ILCRKRRAS----EAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISE-------AERV 274
           IL R R  S    +A + FD L  +  P  V  + +++    RA + S        A  +
Sbjct: 19  ILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSL 78

Query: 275 FREMKMAGIQ---PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           F  M  +G+     N Y   I+I   C  G++  A   FA  L++G    ++T N L++ 
Sbjct: 79  FNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKG 138

Query: 332 HVKASRTEKVLQ-VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--- 387
                RT+  +  V+ +M  LG   D  +YN LI   C + K ++A+++L  M   G   
Sbjct: 139 LCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYN 198

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
           C+PN  +++ I     K G+V+ A+ ++ +M      P+ VTY+ L+     +++ +   
Sbjct: 199 CSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAE 258

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            + + M +  V PN  TY I+I  YC +G    A + +++M     L+P    Y +++Q 
Sbjct: 259 AILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM-SGSGLQPDVVTYILLIQY 317

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
             + G+  +   + + MV +G
Sbjct: 318 YCKIGRCAEARSVFDSMVRKG 338



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 153/331 (46%), Gaps = 40/331 (12%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP+ V    + H +  + G+V   D  +HF + M S  +   + +F+ L+      G   
Sbjct: 410 RPDVVSYSTVIHILCKI-GRVE--DAVYHF-NQMVSEGLSPNIISFTSLIHGLCSIGEWK 465

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLV 259
           +       M   G  PD I  + ++  LC++ R  EAQ FFD  +    +P+V+ Y  L+
Sbjct: 466 KVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLI 525

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYS---------------------------- 291
            G+C  G + E+ + F  M   G++P+ +TY+                            
Sbjct: 526 DGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVK 585

Query: 292 -------IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                  I++  L + G+I  A +++ +M++ G +    T+N ++    + S  ++ L++
Sbjct: 586 FCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 645

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +  ++    E D  T+N +I+   K G++++A  + ++MV +G  P+  T++++ +   +
Sbjct: 646 FEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIE 705

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            G +  +  ++  M+   C  ++   N++++
Sbjct: 706 EGLLEESDDLFLSMEKNGCAADSHMLNVIIR 736



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 9/272 (3%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F D++    V+  V +++ L+  Y   G   E++  F+RM   G  PD   ++ +++
Sbjct: 502 AQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLN 561

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDV----IVYTNLVRGWCRAGNISEAERVFREMKMAG 282
              +  R  +A + +   ++ F  DV    I    ++ G  +AG I  A  ++ +M   G
Sbjct: 562 GYFKNGRVEDALALY---REMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
            Q  + TY+ V+  LC    +  A  +F ++     E +  TFN ++   +K  R ++  
Sbjct: 619 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAK 678

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            +++ M   G     ITY+ +I    ++G LE++  +  SM + GC  ++   N+I R +
Sbjct: 679 SLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRL 738

Query: 403 SKLGDVNGAHRMYGKM--KDLKCEPNTVTYNI 432
            + GDV  A     K+  K+   E +T    I
Sbjct: 739 LEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 37/412 (8%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN------ 207
           M+N   K R+F+    F+  M+ + V   + T++ L+  Y R GL  EA    N      
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 208 -----------------------------RMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
                                         M + G  P+   ++ ++  +CR+    EAQ
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 239 SFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             FD +  +   PD++ +++L+    R G++ +A   FREM+ +GI P+   Y+I+ID  
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           CR G ++ A  +  EML  GC  + +T+N  +    K         ++N+M   G   D 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            T+  LI  +CKDG ++ A+ +  +MVR    P+  T+N +     K G++  A  ++  
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M      P+ ++Y  ++  F +S      L L  +M E  + PN+ T   LI  YC  G 
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              AY+Y+ +MI    + P S  Y  ++    +   L+K   L+ +M  RG 
Sbjct: 623 MPKAYEYLSKMISNGII-PDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 178/380 (46%), Gaps = 6/380 (1%)

Query: 157 LAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L G VR    DLAW     +    +E+ V T +I+V    +       +   + ME  G 
Sbjct: 229 LGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGV 288

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAER 273
             D + ++ +I+  CR+    EA    +S   +  EP ++ Y  ++ G C+ G    A+ 
Sbjct: 289 FADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKD 348

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           V  EM   G+ PN  TY+ ++  +CR   I  A ++F EM   G  P+ ++F++L+ V  
Sbjct: 349 VLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLA 408

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           +     + L  + +M+R G   D + Y  LID  C++G L DA+K+ + M+ +GC  +  
Sbjct: 409 RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV 468

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T+N     + K      A  ++ +M +    P+  T+  L++ +    + D  L L + M
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
               ++P+  TY  LI  +C  G    A +   +MI +  + P    Y  VL     +G 
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII-PDHISYGTVLNGFCSSGL 587

Query: 514 LQKHEELVEKMVDRGFTARP 533
           L +   L ++M+++G   RP
Sbjct: 588 LPEALNLCDQMLEKGI--RP 605



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 174/365 (47%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M  R V   + +FS L+    R G   +A+  F  ME  G  PD + ++I+I 
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID 440

Query: 227 ILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR    S+A    D  L      DV+ Y   + G C+    ++A+ +F EM   G+ P
Sbjct: 441 GFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP 500

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           + YT++ +I   C+ G + +A ++F  M+    +P+ +T+N L+    KA    +  +++
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + M R     D I+Y  +++  C  G L +A+ + + M+ KG  PN  T N + +   + 
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A+    KM      P++ +YN L+  +    + +    L  EME+  ++ N+ TY
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            +++  +C  G    A + +R+MIE   + P  + Y  ++        +++     ++M+
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIG-INPDGATYSSLINGHVSQDNMKEAFRFHDEML 739

Query: 526 DRGFT 530
            RG  
Sbjct: 740 QRGLV 744



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 179/374 (47%), Gaps = 11/374 (2%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           A K+R+   A+    +++ + V ++++  + L+   VR G    A   +  +   G   +
Sbjct: 200 AKKLREGSEAFQ---ILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
               +I+++ LC+ R+      F   ++ K    D++ Y  L+  +CR G + EA ++  
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
                G++P + TY+ ++  LC+ G+  RA DV  EML++G  PN+ T+N L+   V+  
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL---VEIC 373

Query: 337 RTEKVL---QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           R + +L   +++++M R G   D ++++ LI    ++G L  A+     M R G  P+  
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            + ++     + G ++ A +M  +M    C  + VTYN  +      K       L  EM
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            E  + P+  T+  LI  YC  G+ + A      M+    LKP    Y  ++    +AG+
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN-LKPDKVTYNTLIDGFCKAGE 552

Query: 514 LQKHEELVEKMVDR 527
           + + +EL + M+ +
Sbjct: 553 MGRAKELWDDMIRK 566



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 144/291 (49%), Gaps = 1/291 (0%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M +R   + V T++  +    +  + A+A   FN M E G  PD   F+ +I   C+ 
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515

Query: 232 RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
               +A + F+++ +   +PD + Y  L+ G+C+AG +  A+ ++ +M    I P+  +Y
Sbjct: 516 GNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
             V++  C  G +  A ++  +MLE G  PN +T N L++ + ++    K  +  ++M  
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G   D+ +YN LID + K+  LE A  ++N M ++G   N  T+N+I       G +  
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           A ++  KM ++   P+  TY+ L+    +  +     +   EM +  + P+
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 153/327 (46%), Gaps = 19/327 (5%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK------------------FEPDVIVYTNLVRG 261
           + S ++  L R RR SEAQ+    +  K                  F    ++Y  LVR 
Sbjct: 137 SLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRT 196

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           + +A  + E    F+ ++  G+  ++   + ++  L R G +  A +++ E++  G E N
Sbjct: 197 YVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T N ++    K  + E V+   + M+  G  AD +TYN LI+ +C++G +E+A ++LN
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
           S   +G  P   T+N I   + K+G  + A  +  +M  L   PN  TYN L+       
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
           +     ++  EM    V P++ ++  LI +    GH   A  + REM E   + P + +Y
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIY 435

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +++    R G L    ++ ++M+ RG
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARG 462



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%)

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + Y+ L+  + +  KL +  +    + RKG + + +  N +   + + G V+ A  +YG+
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           +     E N  T NI++      +  + V+    +ME   V  ++ TY  LI  YC  G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              A++ +      + ++PG   Y  +L  L + G+  + ++++ +M+  G T
Sbjct: 308 VEEAFQLLNS-FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 244/504 (48%), Gaps = 24/504 (4%)

Query: 45  SSPDTPFLSPE---ETLISEKFHSLIKDHHRKNPNPSSN------SNPSLNPDFT----- 90
           SS  TP ++ E   ++++S ++H + +      P   SN      S P L  DF      
Sbjct: 62  SSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHP 121

Query: 91  --IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVT-ARPEF-VH 146
             + + S   + +  A   SP     ++++  G R    +      F+ +T +R    V 
Sbjct: 122 HCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTR----IATNRELFDELTLSRDRLSVK 177

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S  ++  ++ +  ++R+ D A+    +MK + +   ++T + ++  +++      A   +
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
             M     +     F+I++++LC++ +  +A+ F   ++   F+P+V+ Y  ++ G+   
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           GNI  A R+   M++ GI+P+ YTY  +I  +C+ G++  A  +F +M+E+G  PN++T+
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+  +      E+     ++M + G      TYN L+     +G++ +A  ++  M +
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  P+A T+N++    S+ G+   A  ++ +M     EP  VTY  L+ + +       
Sbjct: 418 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 477

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L +++ +  V P+V  +  ++  +C  G+   A+  ++EM + K + P    +  ++
Sbjct: 478 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLM 536

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
           Q   R G++++   L+++M  RG 
Sbjct: 537 QGRCREGKVEEARMLLDEMKRRGI 560



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 6/380 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + + F   +  +P  V     Y+ +I+        + A   +D M+ + +E    T+  L
Sbjct: 270 EFIGFMEGLGFKPNVVS----YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 325

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           +    + G   EA   F++M E G  P+ + ++ +I   C K     A S+ D + K   
Sbjct: 326 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 385

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P V  Y  LV      G + EA+ + +EM+  GI P+  TY+I+I+   RCG   +A D
Sbjct: 386 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFD 445

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EML  G EP  +T+ +L+ V  + +R ++   ++ ++   G   D I +N ++D HC
Sbjct: 446 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC 505

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            +G +E A  +L  M RK   P+  TFN + +   + G V  A  +  +MK    +P+ +
Sbjct: 506 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHI 565

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           +YN L+  +          +++ EM      P + TY  LI   C     + A + ++EM
Sbjct: 566 SYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625

Query: 489 IEEKCLKPGSSVYEMVLQQL 508
           +  K + P  S Y  +++ +
Sbjct: 626 V-NKGISPDDSTYLSLIEGM 644


>gi|116790303|gb|ABK25569.1| unknown [Picea sitchensis]
          Length = 541

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 197/423 (46%), Gaps = 12/423 (2%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
            +S   V  V++ S G       ++ + FF W   +    HSP  ++ +++L GK + FD
Sbjct: 122 GVSIQFVEDVLKLSYGAG-----MEAVKFFRWAGLKLTRKHSPLAWNLLVDLLGKEKLFD 176

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
             W  I +MK+    + ++ FS +   YV+AG   EA   F  ME+YGC  D +A +  I
Sbjct: 177 AMWDCIKVMKNEGT-VPMEIFSSVFGNYVQAGKLDEAKMTFEVMEQYGCRHDVVALNCYI 235

Query: 226 SILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM--KMAGI 283
           S LCR ++A  A  FFD +K +  PD   Y  ++ GW   GN+S A+  F EM   +  +
Sbjct: 236 SALCRYKQAKAALEFFDRVKARIAPDADTYALMLEGWEIEGNVSMAKTTFGEMIVHLGWV 295

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
             N   Y+  +  L    Q+  A      M  + C P+   F N +++  +   T+    
Sbjct: 296 PNNTSAYNAFLSTLVNGFQVEEALKFLVMMKSLKCLPDLGFFRNTLQLLYQRKDTKNAYG 355

Query: 344 VYNQMKRLGCEADTITYNFLID--CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           ++  M++ G   D  TYN +I   C     +++ A ++L  MV  G  P+  ++N IF  
Sbjct: 356 LWELMRQSGIVPDLPTYNTMIGVCCSVNPIQVDFADRLLVEMVCNGAFPDFRSYNTIFEA 415

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +     V  A  ++ +M   +  P    Y   ++M+   +  DM + + K M +  + P 
Sbjct: 416 LIIARKVEEASSIFREMTKNEFCPLYANYVRAIKMYFEVEDPDMAVIMWKHMIQKAIFPK 475

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
            +    LI  +C +G  + A KY  E I      P  ++ +  L+  R+AG+   + +L 
Sbjct: 476 SDCAATLIDGFCDLGRVSEALKYSLETINRGVEIPVETMTK--LKNARQAGKQDAYGQLE 533

Query: 522 EKM 524
           +KM
Sbjct: 534 KKM 536


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 183/371 (49%), Gaps = 2/371 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +++++    K + +    +    M+ R ++  +   +IL+  + + GL   A   F ++ 
Sbjct: 90  FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 149

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ I F+ +I  LC K +  +A +F D L    F+ + I Y  L+ G C+ G   
Sbjct: 150 KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETR 209

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  + R +    +QPNV  YS +ID +C+   +  A D+++EM+  G  PN +T++ L+
Sbjct: 210 AALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 269

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + +  + ++N+M     + D  T+N L+D  CK GK+  A+K+++ M  +G  
Sbjct: 270 SGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQP 329

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T++ I   + K   V+ A  +  K+KD    PN  TY IL+    TS   +    +
Sbjct: 330 PNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNI 389

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +++     +  V TY ++   +C  G ++ A   + +M E  C+ P +  YE++   L 
Sbjct: 390 FEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCI-PDAKTYELIKLSLF 448

Query: 510 RAGQLQKHEEL 520
           + G+    E+L
Sbjct: 449 KKGENDMAEKL 459



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 149/299 (49%), Gaps = 4/299 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G++ Q   A +F D + +   +    ++  L+    + G    A+    R++     P
Sbjct: 169 LKGQIHQ---ALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQP 225

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + +S +I  +C+ +  ++A   +  +  K   P+V+ Y+ L+ G+   G + +A  +F
Sbjct: 226 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLF 285

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M    I+P+VYT++I++D  C+ G+I+ A  +  EM + G  PN +T+++++    K 
Sbjct: 286 NKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKT 345

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R +K + +  ++K  G   +  TY  LID  C  GKLEDA  +   ++ KG +    T+
Sbjct: 346 HRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTY 405

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
            ++F    K G  + A  +  KM++  C P+  TY ++          DM  KL +E E
Sbjct: 406 IVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECE 464



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 160/332 (48%), Gaps = 6/332 (1%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTN 257
           +AV  FN +      P  I F+ ++  L + +        + S K +F   +P+++    
Sbjct: 70  DAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTV--LYLSKKMEFRGIKPNLVNCNI 127

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+  +C+ G I  A  VF ++   G  PN  T++ +I  LC  GQI +A +   +++ +G
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
            + N I++  L+    K   T   L +  ++     + + + Y+ +ID  CKD  + DA 
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            + + MV KG +PN  T++ +      +G +  A  ++ KM     +P+  T+NIL+ +F
Sbjct: 248 DLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVF 307

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             S      LKL  EM +    PN+ TY  ++   C     + A   + ++ +++ ++P 
Sbjct: 308 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKL-KDQGIRPN 366

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              Y +++  L  +G+L+    + E ++ +G+
Sbjct: 367 MHTYTILIDGLCTSGKLEDARNIFEDLLVKGY 398



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 148/304 (48%), Gaps = 1/304 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L++     G   +A++  +++   G   ++I++  +I  LC+      A      +
Sbjct: 159 TFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV 218

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K  +P+V++Y+ ++ G C+  ++++A  ++ EM   GI PNV TYS +I      G++
Sbjct: 219 DGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKL 278

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A D+F +M+    +P+  TFN L+ V  K+ +    L++ ++M   G   + +TY+ +
Sbjct: 279 KDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSI 338

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D  CK  +++ A+ +L  +  +G  PN  T+ ++   +   G +  A  ++  +     
Sbjct: 339 LDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGY 398

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +   VTY ++   F      D    L  +MEEN   P+  TY ++       G  + A K
Sbjct: 399 DITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEK 458

Query: 484 YIRE 487
             RE
Sbjct: 459 LHRE 462



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 134/281 (47%), Gaps = 14/281 (4%)

Query: 84  SLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPE 143
           +LN    + +L   F+QIS            +I+  C V      L +L   +    +P 
Sbjct: 176 ALNFHDKLVALGFQFNQISYGT---------LIDGLCKVGETRAALDLLRRVDGKLVQPN 226

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            V    +Y  +I+   K +  + A+     M S+ +   V T+S L+  +   G   +AV
Sbjct: 227 VV----MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAV 282

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGW 262
             FN+M      PD   F+I++ + C+  + S A    D + D+ + P+++ Y++++   
Sbjct: 283 DLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 342

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+   + +A  +  ++K  GI+PN++TY+I+ID LC  G++  A ++F ++L  G +   
Sbjct: 343 CKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITV 402

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           +T+  +     K    ++   + ++M+  GC  D  TY  +
Sbjct: 403 VTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 1/224 (0%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A  +F  +L     P +I FN ++   VK+     VL +  +M+  G + + +  N
Sbjct: 67  DVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCN 126

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+C C+ G +  A  V   +++ G NPN  TF  + + +   G ++ A   + K+  L
Sbjct: 127 ILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVAL 186

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             + N ++Y  L+        T   L L + ++   V+PNV  Y  +I   C   H N+A
Sbjct: 187 GFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDA 246

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           +    EM+  K + P    Y  ++      G+L+   +L  KM+
Sbjct: 247 FDLYSEMV-SKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMI 289


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 37/412 (8%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN------ 207
           M+N   K R+F+    F+  M+ + V   + T++ L+  Y R GL  EA    N      
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 208 -----------------------------RMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
                                         M + G  P+   ++ ++  +CR+    EAQ
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 239 SFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             FD +  +   PD++ +++L+    R G++ +A   FREM+ +GI P+   Y+I+ID  
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           CR G ++ A  +  EML  GC  + +T+N  +    K         ++N+M   G   D 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            T+  LI  +CKDG ++ A+ +  +MVR    P+  T+N +     K G++  A  ++  
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M      P+ ++Y  ++  F +S      L L  +M E  + PN+ T   LI  YC  G 
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              AY+Y+ +MI    + P S  Y  ++    +   L+K   L+ +M  RG 
Sbjct: 623 MPKAYEYLSKMISNGII-PDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 178/380 (46%), Gaps = 6/380 (1%)

Query: 157 LAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L G VR    DLAW     +    +E+ V T +I+V    +       +   + ME  G 
Sbjct: 229 LGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGV 288

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAER 273
             D + ++ +I+  CR+    EA    +S   +  EP ++ Y  ++ G C+ G    A+ 
Sbjct: 289 FADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKD 348

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           V  EM   G+ PN  TY+ ++  +CR   I  A ++F EM   G  P+ ++F++L+ V  
Sbjct: 349 VLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLA 408

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           +     + L  + +M+R G   D + Y  LID  C++G L DA+K+ + M+ +GC  +  
Sbjct: 409 RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV 468

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           T+N     + K      A  ++ +M +    P+  T+  L++ +    + D  L L + M
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
               ++P+  TY  LI  +C  G    A +   +MI +  + P    Y  VL     +G 
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII-PDHISYGTVLNGFCSSGL 587

Query: 514 LQKHEELVEKMVDRGFTARP 533
           L +   L ++M+++G   RP
Sbjct: 588 LPEALNLCDQMLEKGI--RP 605



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 174/365 (47%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M  R V   + +FS L+    R G   +A+  F  ME  G  PD + ++I+I 
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID 440

Query: 227 ILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR    S+A    D  L      DV+ Y   + G C+    ++A+ +F EM   G+ P
Sbjct: 441 GFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP 500

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           + YT++ +I   C+ G + +A ++F  M+    +P+ +T+N L+    KA    +  +++
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + M R     D I+Y  +++  C  G L +A+ + + M+ KG  PN  T N + +   + 
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A+    KM      P++ +YN L+  +    + +    L  EME+  ++ N+ TY
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            +++  +C  G    A + +R+MIE   + P  + Y  ++        +++     ++M+
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIG-INPDGATYSSLINGHVSQDNMKEAFRFHDEML 739

Query: 526 DRGFT 530
            RG  
Sbjct: 740 QRGLV 744



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 179/374 (47%), Gaps = 11/374 (2%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           A K+R+   A+    +++ + V ++++  + L+   VR G    A   +  +   G   +
Sbjct: 200 AKKLREGSEAFQ---ILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
               +I+++ LC+ R+      F   ++ K    D++ Y  L+  +CR G + EA ++  
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
                G++P + TY+ ++  LC+ G+  RA DV  EML++G  PN+ T+N L+   V+  
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL---VEIC 373

Query: 337 RTEKVL---QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           R + +L   +++++M R G   D ++++ LI    ++G L  A+     M R G  P+  
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            + ++     + G ++ A +M  +M    C  + VTYN  +      K       L  EM
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            E  + P+  T+  LI  YC  G+ + A      M+    LKP    Y  ++    +AG+
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN-LKPDKVTYNTLIDGFCKAGE 552

Query: 514 LQKHEELVEKMVDR 527
           + + +EL + M+ +
Sbjct: 553 MGRAKELWDDMIRK 566



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 144/291 (49%), Gaps = 1/291 (0%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M +R   + V T++  +    +  + A+A   FN M E G  PD   F+ +I   C+ 
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515

Query: 232 RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
               +A + F+++ +   +PD + Y  L+ G+C+AG +  A+ ++ +M    I P+  +Y
Sbjct: 516 GNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
             V++  C  G +  A ++  +MLE G  PN +T N L++ + ++    K  +  ++M  
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G   D+ +YN LID + K+  LE A  ++N M ++G   N  T+N+I       G +  
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           A ++  KM ++   P+  TY+ L+    +  +     +   EM +  + P+
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 154/328 (46%), Gaps = 19/328 (5%)

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK------------------FEPDVIVYTNLVR 260
           ++ S ++  L R RR SEAQ+    +  K                  F    ++Y  LVR
Sbjct: 136 LSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVR 195

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
            + +A  + E    F+ ++  G+  ++   + ++  L R G +  A +++ E++  G E 
Sbjct: 196 TYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIEL 255

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N  T N ++    K  + E V+   + M+  G  AD +TYN LI+ +C++G +E+A ++L
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           NS   +G  P   T+N I   + K+G  + A  +  +M  L   PN  TYN L+      
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
            +     ++  EM    V P++ ++  LI +    GH   A  + REM E   + P + +
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVI 434

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y +++    R G L    ++ ++M+ RG
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARG 462



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%)

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + Y+ L+  + +  KL +  +    + RKG + + +  N +   + + G V+ A  +YG+
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           +     E N  T NI++      +  + V+    +ME   V  ++ TY  LI  YC  G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              A++ +      + ++PG   Y  +L  L + G+  + ++++ +M+  G T
Sbjct: 308 VEEAFQLLNS-FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 244/504 (48%), Gaps = 24/504 (4%)

Query: 45  SSPDTPFLSPE---ETLISEKFHSLIKDHHRKNPNPSSN------SNPSLNPDFT----- 90
           SS  TP ++ E   ++++S ++H + +      P   SN      S P L  DF      
Sbjct: 40  SSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHP 99

Query: 91  --IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVT-ARPEF-VH 146
             + + S   + +  A   SP     ++++  G R    +      F+ +T +R    V 
Sbjct: 100 HCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTR----IATNRELFDELTLSRDRLSVK 155

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S  ++  ++ +  ++R+ D A+    +MK + +   ++T + ++  +++      A   +
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
             M     +     F+I++++LC++ +  +A+ F   ++   F+P+V+ Y  ++ G+   
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           GNI  A R+   M++ GI+P+ YTY  +I  +C+ G++  A  +F +M+E+G  PN++T+
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+  +      E+     ++M + G      TYN L+     +G++ +A  ++  M +
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  P+A T+N++    S+ G+   A  ++ +M     EP  VTY  L+ + +       
Sbjct: 396 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 455

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L +++ +  V P+V  +  ++  +C  G+   A+  ++EM + K + P    +  ++
Sbjct: 456 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLM 514

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
           Q   R G++++   L+++M  RG 
Sbjct: 515 QGRCREGKVEEARMLLDEMKRRGI 538



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 6/380 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + + F   +  +P  V     Y+ +I+        + A   +D M+ + +E    T+  L
Sbjct: 248 EFIGFMEGLGFKPNVVS----YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 303

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           +    + G   EA   F++M E G  P+ + ++ +I   C K     A S+ D + K   
Sbjct: 304 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 363

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P V  Y  LV      G + EA+ + +EM+  GI P+  TY+I+I+   RCG   +A D
Sbjct: 364 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFD 423

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  EML  G EP  +T+ +L+ V  + +R ++   ++ ++   G   D I +N ++D HC
Sbjct: 424 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC 483

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            +G +E A  +L  M RK   P+  TFN + +   + G V  A  +  +MK    +P+ +
Sbjct: 484 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHI 543

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           +YN L+  +          +++ EM      P + TY  LI   C     + A + ++EM
Sbjct: 544 SYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603

Query: 489 IEEKCLKPGSSVYEMVLQQL 508
           +  K + P  S Y  +++ +
Sbjct: 604 V-NKGISPDDSTYLSLIEGM 622


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 187/377 (49%), Gaps = 5/377 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I LA K    + A +    M +  ++ ++ TF+ L+    + G   EA    +++ +Y 
Sbjct: 170 LIQLA-KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 228

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
            +PD   ++ +I   CR R    A   FD + K+  +P+ + Y+ L+ G C  G + EA 
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +  EM   GI+P VYTY++ I ALC       A ++ A M + GC PN  T+  L+   
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +  + E  + +Y++M + G   +T+TYN LI+  C  G+   A+K+ + M   G   N 
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N I + +   GD+  A  ++ KM  +   P  VTYN L+  + T  + +   +L   
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRA 511
           M+EN  EP+  TY  L++ +   G   +A  Y +EM+E  C L P    Y  ++    + 
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE--CGLNPNPVSYTALIDGHSKD 526

Query: 512 GQLQKHEELVEKMVDRG 528
           G++     L+++M + G
Sbjct: 527 GKVDIALSLLKRMEEMG 543



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 180/381 (47%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      + D A   ++ M  + +E TV T+++ +          EA+    RM+
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 330

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC P+   ++ +IS L R  +   A   +   LK+   P+ + Y  L+   C  G  S
Sbjct: 331 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 390

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++F  M+  G   N  TY+ +I  LC  G I +A  +F +ML++G  P  +T+N L+
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             ++         ++ + MK  GCE D  TYN L+    K GKLE A      MV  G N
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  ++  +    SK G V+ A  +  +M+++ C PN  +YN ++   +         K+
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M E  + PNV TY  LI   C  G    A+K   +M + KCL P    Y  ++  L 
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL-PNLYTYSSLIYGLC 629

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           + G+  + E L+++M  +G  
Sbjct: 630 QEGKADEAEILLKEMERKGLA 650



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 183/382 (47%), Gaps = 4/382 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   ++ + ++A      M    +     T++ L+      G  + A+  F+ ME
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
            +G   +   ++ +I  LC      +A   F+  LK    P V+ Y  L+ G+   GN++
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+   MK  G +P+ +TY+ ++    + G++  A   F EM+E G  PN +++  L+
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H K  + +  L +  +M+ +GC  +  +YN +I+   K+ +  +A K+ + MV +G  
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+  +   + + G    A +++  M+  KC PN  TY+ L+         D    L
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEIL 640

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            KEME   + P+  T+  LI  +  +G  ++A+  +R M++  C KP    Y ++L+ L+
Sbjct: 641 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGC-KPNYRTYSVLLKGLQ 699

Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
           +   L   EE +  +VD  F  
Sbjct: 700 KECLLL--EEKIFPLVDNYFLG 719



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 6/272 (2%)

Query: 263 CRAGNISEAERV---FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           CR  N  E  RV     E+   G   ++Y+ + ++  L +   +  A +++ +ML  G +
Sbjct: 138 CR--NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQ 195

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +TFN L+ +  K  +  +   + +Q+ +     D  TY  LI  HC++  L+ A  V
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + MV++GC+PN+ T++ +   +   G V+ A  M  +M +   EP   TY + +     
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +  +  ++L   M++    PNV TY  LI+    +G    A     +M++E  L P + 
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG-LVPNTV 374

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            Y  ++ +L   G+     ++   M   G  A
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLA 406


>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 876

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 160/342 (46%), Gaps = 38/342 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L+FF W+  +P F H    Y  M+ + G+ +QF      +D M     +  V T++ L+
Sbjct: 363 ALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLI 422

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             Y RA    +AV  FN M+  GC                                  EP
Sbjct: 423 HSYGRANYLNDAVDVFNEMQRVGC----------------------------------EP 448

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D + Y  L+    +AG +  A  +++ M+ AG+ P+ +TYS++I+ L + G +  AH +F
Sbjct: 449 DRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLF 508

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC--HC 368
            EM+E GC PN +T+N ++ +  KA   +  L++Y  M+  G + D +TY+ +++   HC
Sbjct: 509 CEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHC 568

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G L++A  V + M RK   P+   + ++     K G+V  A + Y  M +    PN  
Sbjct: 569 --GYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVP 626

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           T N L+  F           L + M E  + P++ TY +L++
Sbjct: 627 TCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLS 668



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 143/255 (56%), Gaps = 3/255 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  G   + +TY+ ++  L R  Q    + +  +M++ GC+PN +T+N L+  + +A+  
Sbjct: 372 RQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYL 431

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
              + V+N+M+R+GCE D +TY  LID H K G L+ A+++   M   G +P+  T+++I
Sbjct: 432 NDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVI 491

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G +  AH+++ +M +  C PN VTYNI++ + A +++    LKL ++M+    
Sbjct: 492 INCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGF 551

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           +P+  TY I++ +    G+ + A     EM + K   P   VY +++    +AG ++K  
Sbjct: 552 QPDKVTYSIVMEVLGHCGYLDEAEAVFSEM-KRKNWVPDEPVYGLLVDLWGKAGNVEKAW 610

Query: 519 ELVEKMVDRGFTARP 533
           +  + M++ G   RP
Sbjct: 611 QWYQTMLNTGL--RP 623



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 11/350 (3%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS--------ILCRKRRASEAQSFF 241
            RR+   G   E V    R   +G A ++   ++  S        +L + +  + A +FF
Sbjct: 308 TRRFASNGHIVENVAHILRQIRWGPAAEEALANLNYSMDPYQANQVLKQLQDHTVALNFF 367

Query: 242 DSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
             LK +  F  D   YT +V    RA       ++  +M   G QPNV TY+ +I +  R
Sbjct: 368 YWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGR 427

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
              +  A DVF EM  VGCEP+ +T+  L+ +H KA   +  L++Y +M+  G   DT T
Sbjct: 428 ANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFT 487

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y+ +I+C  K G L  A K+   MV +GC PN  T+N++    +K  +   A ++Y  M+
Sbjct: 488 YSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQ 547

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
               +P+ VTY+I+M++       D    +  EM+     P+   Y +L+ ++   G+  
Sbjct: 548 SAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVE 607

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            A+++ + M+    L+P       +L    R  +L     L++ M++ G 
Sbjct: 608 KAWQWYQTMLNTG-LRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGL 656


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 194/441 (43%), Gaps = 70/441 (15%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  + +L W F + M   NV   V T++ L+  + RAG A E       MEE GC+P  +
Sbjct: 213 KANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLV 272

Query: 220 AFSIVISILCR-----------------------------------KRRASEAQSFFDSL 244
            +++VI  LCR                                   ++R +EA+   + +
Sbjct: 273 TYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM 332

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K  +P  + YT L+ G+ R G+  EA RV  EM   G++ N++TY+ ++  +C+ G +
Sbjct: 333 FSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDM 392

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  +  EM+ VG +P++ T+NN++  ++K   T +V  + ++MK+        T   +
Sbjct: 393 EKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMI 452

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C+ G +EDA +V   MV  G  PNA  +  + +   + G    A R+   M     
Sbjct: 453 INGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV 512

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+ + YN ++     S+  +       EM E  ++PNV TY  LI  YC  G    A +
Sbjct: 513 QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADR 572

Query: 484 YIREM---------------IEEKC-------------------LKPGSSVYEMVLQQLR 509
           Y +EM               I+  C                   + P    Y  ++  L 
Sbjct: 573 YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLL 632

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           R G+LQ   EL+ + +++G  
Sbjct: 633 RNGKLQGAMELLSEFLEKGLV 653



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 167/359 (46%), Gaps = 2/359 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK  N+  T  T  +++    R G   +A   F  M   G  P+ + ++ +I    ++ R
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA      +  K  +PDV+ Y +++ G C++  + EA+    EM   G++PNVYTY  
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I   C+ G++  A   F EML  G  PN +    L+  + K   T +   ++  M    
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D  TY+ LI    ++GKL+ A+++L+  + KG  P+  T+N I     K G +  A 
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +++  M      PN +TYN L+     +   +   +L   +    +  N  TY  +I  Y
Sbjct: 677 QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           C  G+ + A++   EM   K + P S VY  ++   R+ G  +K   L  + V +GF +
Sbjct: 737 CKSGNLSKAFRLFDEMT-LKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS 794



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 177/381 (46%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+  GK ++   A   ++ M S+ ++     ++ L+  ++R G + EA      M 
Sbjct: 309 YSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEML 368

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G   +   ++ ++  +C+     +A +  + +     +PD   Y N++ G+ +  N S
Sbjct: 369 ARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTS 428

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             + +  EMK + + P  YT  ++I+ LCR G I  A  VF  M+ +G +PN++ +  L+
Sbjct: 429 RVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLI 488

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           + HV+  R ++ +++   M + G + D + YN +I   CK  K+E+A   L  M+ +G  
Sbjct: 489 KGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK 548

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+  +     K G++  A R + +M      PN V    L+  +    ST     +
Sbjct: 549 PNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSI 608

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M    V P+V TY  LI      G    A + + E + EK L P    Y  ++    
Sbjct: 609 FRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFL-EKGLVPDVFTYNSIISGFC 667

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           + G + K  +L E M  +G +
Sbjct: 668 KQGGIGKAFQLHEYMCQKGIS 688



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 184/418 (44%), Gaps = 38/418 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I    K R+ + A  ++  M  R ++  V T+  L+  Y ++G    A   
Sbjct: 514 PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
           F  M   G AP+ +  + +I   C++   +EA S F   L     PDV  Y+ L+ G  R
Sbjct: 574 FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLR 633

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +  A  +  E    G+ P+V+TY+ +I   C+ G I +A  +   M + G  PN IT
Sbjct: 634 NGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIIT 693

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    KA   E+  ++++ +   G   + +TY  +ID +CK G L  A ++ + M 
Sbjct: 694 YNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMT 753

Query: 385 RKGCNPNA----------------------------------STFNMIFRCISKLGDVNG 410
            KG  P++                                  S+ N +     K G V  
Sbjct: 754 LKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIE 813

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A+++   M D   +P+ VTY IL+     +       +   +M++  + PN  TY  L++
Sbjct: 814 ANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLS 873

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y   G  +  +    EMI  K ++P    + +++    + G   K  +LV+ M+ +G
Sbjct: 874 GYNMAGRRSEMFALFDEMI-AKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKG 930



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 163/358 (45%), Gaps = 37/358 (10%)

Query: 183  VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
            V T++ ++  + + G   +A      M + G +P+ I ++ +I+ LC+      A+  FD
Sbjct: 656  VFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFD 715

Query: 243  SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
             +  K    + + Y  ++ G+C++GN+S+A R+F EM + G+ P+ + YS +ID   + G
Sbjct: 716  GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEG 775

Query: 302  QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
               +A  +F E ++ G    S + N LM    K+ +  +  Q+   M     + D +TY 
Sbjct: 776  NTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYT 834

Query: 362  FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
             LID HCK G L++A +    M ++   PNA T+  +    +  G  +    ++ +M   
Sbjct: 835  ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894

Query: 422  KCEPNTVTYNILMQM-------FATSKSTD----------------------------MV 446
              EP+ VT+++++           T K  D                             V
Sbjct: 895  DIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEV 954

Query: 447  LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
            LK+ +++EE  +  ++ T   L+  +   G  + A + ++ M+  K +   + + +++
Sbjct: 955  LKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 170/349 (48%), Gaps = 6/349 (1%)

Query: 147  SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            SP++  Y+ +IN   K  + + A    D +  + +     T++ ++  Y ++G  ++A  
Sbjct: 688  SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFR 747

Query: 205  AFNRMEEYGCAPDKIAFSIVISILCRKRRASEA--QSFFDSLKDKFEPDVIVYTNLVRGW 262
             F+ M   G  PD   +S +I   CRK   +E     F +S++  F     +   L+ G+
Sbjct: 748  LFDEMTLKGVPPDSFVYSALIDG-CRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGF 805

Query: 263  CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            C++G + EA ++  +M    ++P+  TY+I+ID  C+ G +  A   F +M +    PN+
Sbjct: 806  CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865

Query: 323  ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            +T+  L+  +  A R  ++  ++++M     E D +T++ +ID H K+G     +K+++ 
Sbjct: 866  LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDD 925

Query: 383  MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
            M++KG N + +  +++   + +   V+   ++  K+++     +  T + L++ F  +  
Sbjct: 926  MLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGK 985

Query: 443  TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
             D   ++ K M   +  P+      LI +        NA  ++++M  E
Sbjct: 986  MDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWE 1034



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/462 (21%), Positives = 192/462 (41%), Gaps = 47/462 (10%)

Query: 103 TAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
            ++ +SP  V  VI K           ++L FFNWV  +  F      +  +  +    R
Sbjct: 61  VSNKLSPDVVHSVITKQVNDPK-----RLLDFFNWVQFQMGFSQKLQSFSILALILCNSR 115

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
            F  A   ++ M   +     +    L++      L     +  +   + G     + F 
Sbjct: 116 LFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRG-----VVFE 170

Query: 223 IVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           ++I    +K    EA SFF   K + F   ++    L+    +A  +    R +  M  A
Sbjct: 171 LLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEA 230

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            +  +VYTY+ +I+A  R G       +  EM E GC P+ +T+N ++    +A   ++ 
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEA 290

Query: 342 LQVYNQMKRLGCEADTITYNFLIDC-----HCKDGKL----------------------- 373
            ++   M + G  AD  TY+ LID       C + KL                       
Sbjct: 291 FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDG 350

Query: 374 -------EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
                   +A +V   M+ +G   N  T+N + + + K GD+  A  +  +M  +  +P+
Sbjct: 351 FMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           T TYN +++ +   ++T  V  L  EM+++ + P   T  ++I   C  G   +A + + 
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASR-VF 469

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           E++    +KP + +Y  +++   + G+ Q+   +++ M  +G
Sbjct: 470 EIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 196/393 (49%), Gaps = 7/393 (1%)

Query: 141 RPEFVHS---PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           R + +H    P++    + L+G  R  + D     +D M S ++     T+SIL     R
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIV 254
            G +   +  F    + G        SI+++ LC+  + ++A+  F+ L      P  ++
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           Y  L+ G+C+  ++  A  +F +MK   I+P+  TY+ +I+ LC+   +T+A D+  EM 
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           + G +P+  TFN L+  +  A + EK   V + M++ G ++D I++  ++   CK+GK+ 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +A+ +L+ M+ K   PNA  +N I     + GD   A  +  KMK+     + VTYN+L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           +    S   D   +L   +    + P+V +Y  +I+  C  G  + A + ++EM  +  +
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM-NKYGI 610

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +P       ++  L  AG++   E L ++M+ +
Sbjct: 611 RPTLRTCHTLVSALASAGRVHDMECLYQQMLHK 643



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           ++++++    R+G  ++A+  F+ M + G AP++I ++ +I    +           D  
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQM 255

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L D  +P+V+ Y  L+ G CR G + E   +  EM    + P+ +TYSI+ D L R G+ 
Sbjct: 256 LHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGES 315

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +FAE L+ G    + T + L+    K  +  K  QV+  +   G    T+ YN L
Sbjct: 316 QTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTL 375

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+ +C+   L  A  +   M  +   P+  T+N +   + KL  V  A  +  +M+    
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+  T+N L+  + T+   +    +  +M++  ++ +V ++  ++  +C  G    A  
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + +MI  K + P + VY  ++     +G  ++   LVEKM + G +A
Sbjct: 496 ILDDMIY-KDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSA 542



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 173/351 (49%), Gaps = 14/351 (3%)

Query: 184 DTFSI--LVRRYVRAGLAAEAVHAFNRM--EEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           DTF+   +V+  V AG    A+    RM   E    PD  ++++VI+ L R  + S+A  
Sbjct: 156 DTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALK 215

Query: 240 FFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
            FD + D    P+ I Y  ++ G  + G++    R+  +M   G +PNV TY++++  LC
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           R G++     +  EM      P+  T++ L     +   ++ +L ++ +  + G      
Sbjct: 276 RTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY 335

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           T + L++  CKDGK+  A +V   +V  G  P    +N +     ++ D+ GA  ++ +M
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 419 KDLKCEPNTVTYNILM----QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           K     P+ +TYN L+    ++   +K+ D+V+    EME++ V+P+V T+  LI  Y  
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVM----EMEKSGVDPSVETFNTLIDAYGT 451

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            G     +  + +M ++K +K     +  V++   + G++ +   +++ M+
Sbjct: 452 AGQLEKCFTVLSDM-QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 152/332 (45%), Gaps = 36/332 (10%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           + V +   T SIL+    + G  A+A   F  +   G  P  + ++ +I+  C+ R    
Sbjct: 328 KGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 387

Query: 237 AQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A   F+ +K +   PD I Y  L+ G C+   +++AE +  EM+ +G+ P+V T++ +ID
Sbjct: 388 AFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLID 447

Query: 296 ALCRCGQITRAHDVFAEMLEVGCE-----------------------------------P 320
           A    GQ+ +   V ++M + G +                                   P
Sbjct: 448 AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAP 507

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N+  +N+++  ++++  TE+ L +  +MK  G  A  +TYN L+   C+  ++++A +++
Sbjct: 508 NAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
            ++  +G  P+  ++N I       GD + A  +  +M      P   T + L+   A++
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASA 627

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
                +  L ++M    VEP+ + Y I++  Y
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 146/310 (47%), Gaps = 1/310 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +IN   +VR    A+   + MKSR++     T++ L+    +  +  +A      M
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           E+ G  P    F+ +I       +  +  +    ++ K  + DVI + ++V+ +C+ G I
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  +  +M    + PN   Y+ +IDA    G   +A  +  +M   G   + +T+N L
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLL 550

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   ++S+ ++  ++   ++  G   D ++YN +I   C  G  + A+++L  M + G 
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   T + +   ++  G V+    +Y +M     EP++  Y I++  +   ++   V  
Sbjct: 611 RPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 449 LKKEMEENEV 458
           LKKEM E  +
Sbjct: 671 LKKEMSEKGI 680



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 1/224 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S + ++ +I+  G   Q +  +  +  M+ + ++  V +F  +V+ + + G   EAV   
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           + M     AP+   ++ +I          +A    + +K+      ++ Y  L++G CR+
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRS 557

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
             I EAE +   ++  G++P+V +Y+ +I A C  G   +A ++  EM + G  P   T 
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTC 617

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           + L+     A R   +  +Y QM     E  +  Y  ++D + +
Sbjct: 618 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 92/191 (48%), Gaps = 1/191 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  ++V      ++ ++  Y+ +G   +A+    +M+  G +   + +++++ 
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLK 552

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LCR  +  EA+    +L+++   PDV+ Y  ++   C  G+  +A  + +EM   GI+P
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            + T   ++ AL   G++     ++ +ML    EP+S  +  ++  +V+     KV  + 
Sbjct: 613 TLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLK 672

Query: 346 NQMKRLGCEAD 356
            +M   G   D
Sbjct: 673 KEMSEKGIAFD 683


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 4/389 (1%)

Query: 143 EFVHSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           E    PD+Y  + MI+   K  Q D A    D M+SR     V T++I++      G   
Sbjct: 124 ETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLE 183

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
            A    + + + GC P  I ++I+I     + R +EA   FD L  +   PD+  Y  ++
Sbjct: 184 LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII 243

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           RG C+ G    A    R +   G  P+V +Y+I++ +     +      +  +M+  GCE
Sbjct: 244 RGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCE 303

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN +T + L+    +  R  + + V   MK  G   D+ +Y+ LI   CK+G+L+ AI+ 
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEY 363

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L  MV  GC P+   +N I   + K G  + A  ++ K+ ++ C P    YN +     +
Sbjct: 364 LEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
             +    L++  EM    ++P+  TY  LI+  C  G  + A   + +M E    +P   
Sbjct: 424 CGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM-EATRFQPTVI 482

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            + +VL  + +A ++ +  EL+  MV++G
Sbjct: 483 SFNIVLLGMCKAHRVFEGIELLITMVEKG 511



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 170/340 (50%), Gaps = 1/340 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+ R  RAG   E+++    +   G  PD +  + +I      R   +A    + L+   
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PDV  Y  ++ G+ +A  I  A +VF  M+  G  P+V TY+I+I +LC  G++  A +
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  E+L+ GC+P+ IT+  L+   +   R  + L++++++   G   D  TYN +I   C
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K+G  + A+  +  +  +GCNP+  ++N++ R            R+   M    CEPN V
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T++IL+  F         + + + M+E  + P+  +Y  LI+ +C  G  + A +Y+ +M
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM 367

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + + CL P    Y  +L  L + G      ++ EK+ + G
Sbjct: 368 VSDGCL-PDIVNYNTILATLCKFGCADLALDVFEKLDEVG 406


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 38/416 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM- 209
           YH +IN    +   + A   +  M  + V   V T+++L++ Y +     EA      M 
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
           EE    PD+ A+ ++I   CR  +  +A    D  L+   + ++ +  +L+ G+C+ G I
Sbjct: 324 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 383

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EAE V   M    ++P+ Y+Y+ ++D  CR G  + A ++  +ML+ G EP  +T+N L
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   +    +  LQ+++ M + G   D + Y+ L+D   K    E A  +   ++ +G 
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             +  TFN +   + K+G +  A  ++ KMKDL C P+ +TY  L+  +  + +     K
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 449 LKKEMEENEVE-----------------------------------PNVNTYRILITMYC 473
           +K  ME   +                                    PN+ TY  LI  +C
Sbjct: 564 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 623

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G  + A+    EM E   L     +   ++  L R G++ +   L++KMVD GF
Sbjct: 624 KEGMLDKAFSSYFEMTENG-LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 180/414 (43%), Gaps = 34/414 (8%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F  S   ++ MI+   K+ +   A    D MK         T+  L+  Y +A    +A 
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 562

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                ME    +P    ++ +IS L + RR  E       +  +   P+++ Y  L+ GW
Sbjct: 563 KVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 622

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA---------------H 307
           C+ G + +A   + EM   G+  N+   S ++  L R G+I  A               H
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682

Query: 308 DVF-------------AEMLEVGCE----PNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + F             A+ L+  C+    PN+I +N  +    K  + +   + ++ +  
Sbjct: 683 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 742

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G   D  TY  LI  +   G +++A ++ + M+R+G  PN  T+N +   + K  +V+ 
Sbjct: 743 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 802

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A R++ K+      PN VTYN L+  +    + D   KLK +M E  + P+V TY  LI 
Sbjct: 803 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             C  G    + K + +MI+   +      Y  ++Q   R+G++QK  +L + M
Sbjct: 863 GLCKHGDIERSMKLLNQMIKAG-VDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 180/427 (42%), Gaps = 36/427 (8%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           +T   ++   PD Y     L G  R+     A++  D M    +E TV T++ L++   R
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIV 254
            G   +A+  ++ M + G APD++ +S ++  L +      A + + D L   F    I 
Sbjct: 450 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           +  ++ G C+ G + EAE +F +MK  G  P+  TY  +ID  C+   + +A  V   M 
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
                P+   +N+L+    K+ R  +V  +  +M   G   + +TY  LID  CK+G L+
Sbjct: 570 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD----------LKCE 424
            A      M   G + N    + +   + +LG ++ A+ +  KM D          LK +
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 425 ----------------------PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
                                 PN + YNI +     +   D   +    +      P+ 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  LI  Y   G+ + A++   EM+  + L P    Y  ++  L ++  + + + L  
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEML-RRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808

Query: 523 KMVDRGF 529
           K+  +G 
Sbjct: 809 KLHQKGL 815



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 116/213 (54%), Gaps = 2/213 (0%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+ I ++I I+ LC+  +  +A+ FF  L  K F PD   Y  L+ G+  AGN+ EA R+
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             EM   G+ PN+ TY+ +I+ LC+   + RA  +F ++ + G  PN +T+N L+  + K
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
               +   ++ ++M   G     +TY+ LI+  CK G +E ++K+LN M++ G +     
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           +  + +   + G++   H++Y  M  ++C   T
Sbjct: 892 YCTLVQGYIRSGEMQKIHKLY-DMMHIRCLSTT 923



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 186/454 (40%), Gaps = 90/454 (19%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF----IDLMK------------ 175
           L FF +V+ +  F  +   Y +++++  + R +D    +    +DL K            
Sbjct: 86  LGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDEL 145

Query: 176 ---SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
               R    +   F ++++ YV  GL   A++ F+ M + G  P                
Sbjct: 146 VGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIP---------------- 189

Query: 233 RASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
                     SL+           +L+    + G    A  V+++M   GI P+V+  SI
Sbjct: 190 ----------SLRS--------CNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 231

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++A C+ G++  A     +M  +G EPN +T+++L+  +V     E    V   M   G
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 353 CEADTITYNF------------------------------------LIDCHCKDGKLEDA 376
              + +TY                                      LID +C+ GK++DA
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +++L+ M+R G   N    N +     K G+++ A  +  +M D   +P++ +YN L+  
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           +     T     L  +M +  +EP V TY  L+   C +G +++A + I  ++ ++ + P
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ-IWHLMMKRGVAP 470

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               Y  +L  L +    +    L + ++ RGFT
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 196/393 (49%), Gaps = 7/393 (1%)

Query: 141 RPEFVHS---PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           R + +H    P++    + L+G  R  + D     +D M S ++     T+SIL     R
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIV 254
            G +   +  F    + G        SI+++ LC+  + ++A+   + L      P  ++
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           Y  L+ G+C+  ++  A  +F +MK   I+P+  TY+ +I+ LC+   +T+A D+  EM 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           + G +P+  TFN L+  +  A + EK   V + M++ G ++D I++  ++   CK+GK+ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +A+ +L+ M+ K   PNA  +N I     + GD   A  +  KMK+     + VTYN+L+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           +    S   D   +L   +    + P+V +Y  +I+  C  G  + A + ++EM  +  +
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM-NKYGI 432

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +P    Y  ++  L  AG++   E L ++M+ +
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 465



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 164/348 (47%), Gaps = 2/348 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           ++++++    R+G  ++A+  F+ M + G  P+ I ++ +I    +           D  
Sbjct: 18  SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM 77

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L D  +P+++ Y  L+ G CRAG + E   +  EM    + P+ +TYSI+ D L R G+ 
Sbjct: 78  LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 137

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +FAE L+ G    + T + L+    K  +  K  QV   +   G    T+ YN L
Sbjct: 138 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 197

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+ +C+   L  A  +   M  +   P+  T+N +   + KL  V  A  +  +M+    
Sbjct: 198 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 257

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+  T+N L+  + T+   +    +  +M++  ++ +V ++  ++  +C  G    A  
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            + +MI  K + P + VY  ++     +G  ++   LVEKM + G +A
Sbjct: 318 ILDDMIY-KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 364



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 158/315 (50%), Gaps = 10/315 (3%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           PD  ++++VI+ L R  + S+A   FD + D    P+ I Y  ++ G  + G++    R+
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
             +M   G +PN+ TY++++  LCR G++     +  EM      P+  T++ L     +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
              +  +L ++ +  + G      T + L++  CKDGK+  A +VL  +V  G  P    
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM----QMFATSKSTDMVLKLK 450
           +N +     ++ D+ GA  ++ +MK     P+ +TYN L+    ++   +K+ D+V+   
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM--- 250

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            EME++ V+P+V T+  LI  Y   G     +  + +M ++K +K     +  V++   +
Sbjct: 251 -EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM-QQKGIKSDVISFGSVVKAFCK 308

Query: 511 AGQLQKHEELVEKMV 525
            G++ +   +++ M+
Sbjct: 309 NGKIPEAVAILDDMI 323



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 151/332 (45%), Gaps = 36/332 (10%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           + V +   T SIL+    + G  A+A      +   G  P  + ++ +I+  C+ R    
Sbjct: 150 KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 209

Query: 237 AQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A   F+ +K +   PD I Y  L+ G C+   +++AE +  EM+ +G+ P+V T++ +ID
Sbjct: 210 AFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLID 269

Query: 296 ALCRCGQITRAHDVFAEMLEVGCE-----------------------------------P 320
           A    GQ+ +   V ++M + G +                                   P
Sbjct: 270 AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAP 329

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N+  +N+++  ++++  TE+   +  +MK  G  A  +TYN L+   C+  ++++A +++
Sbjct: 330 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 389

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
            ++  +G  P+  ++N I       GD + A  +  +M      P   TY+ L+   A++
Sbjct: 390 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 449

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
                +  L ++M    VEP+ + Y I++  Y
Sbjct: 450 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 481



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 147/310 (47%), Gaps = 1/310 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +IN   +VR    A+   + MKSR++     T++ L+    +  +  +A      M
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           E+ G  P    F+ +I       +  +  +    ++ K  + DVI + ++V+ +C+ G I
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  +  +M    + PN   Y+ +IDA    G   +A  +  +M   G   + +T+N L
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   ++S+ ++  ++   ++  G   D ++YN +I   C  G  + A+++L  M + G 
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P   T++ +   ++  G V+    +Y +M     EP++  Y I++  +   ++   V  
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 492

Query: 449 LKKEMEENEV 458
           LKKEM E  +
Sbjct: 493 LKKEMSEKGI 502



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 92/191 (48%), Gaps = 1/191 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  ++V      ++ ++  Y+ +G   +A     +M+  G +   + +++++ 
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LCR  +  EA+    +L+++   PDV+ Y  ++   C  G+  +A  + +EM   GI+P
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
            + TY  ++ AL   G++     ++ +ML    EP+S  +  ++  +V+     KV  + 
Sbjct: 435 TLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLK 494

Query: 346 NQMKRLGCEAD 356
            +M   G   D
Sbjct: 495 KEMSEKGIAFD 505


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 197/437 (45%), Gaps = 40/437 (9%)

Query: 133 SFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           S F+ V    +F  +P L  Y+ +IN   K  + D A    + M  + +     T+SIL+
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFE 249
             + + G    A+H   +M E G       +S +IS  C+  +   A+S FD +  +  +
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+V++YT+L+ G+C+ G +  A R++ EM   GI PN YT++ +I  LC   ++  A+ +
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID--C- 366
           F EM+E    PN +T+N L+  H K   T +  ++ ++M   G   DT TY  LI   C 
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 367 --------------------------------HCKDGKLEDAIKVLNSMVRKGCNPNAST 394
                                           +CK+G+L+DA+     M+ +G   +   
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVC 637

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           ++++   I +  D      +  +M D    P+ V Y  ++   A + +  M   L   M 
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
                PNV TY  LI   C +G  + A    REM+    L P  + Y   L  L   G +
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL-PNQNTYACFLDYLTSEGNI 756

Query: 515 QKHEELVEKMVDRGFTA 531
           +K  +L + +++ GF A
Sbjct: 757 EKAIQLHDVLLE-GFLA 772



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 174/359 (48%), Gaps = 4/359 (1%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           +L+  + +   V T+  LV    +           N M E+G  P + A S ++  L +K
Sbjct: 274 NLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKK 333

Query: 232 RRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                A    + +K KF   P + VY  L+   C+ G + EAE +F  M   G+ PN  T
Sbjct: 334 GNIGSAFDLVNKVK-KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVT 392

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           YSI+ID+ C+ G++  A     +M EVG +     +++L+  H K  +      ++++M 
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G + + + Y  LI  +CK+G+L +A ++ + M  KG +PN  TF  +   +     + 
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A++++G+M +    PN VTYN+L++      +T    +L  EM E  + P+  TYR LI
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  C  G  + A +++ ++  E+  K     +  +L    + G+L    +   +M+ RG
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQ-QKLNEMCFSALLHGYCKEGRLDDALDACREMLGRG 630



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 174/401 (43%), Gaps = 37/401 (9%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           ++RQF +A H  D + S  +   V  ++ +VR          A     RME  GC     
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA------------- 265
            +++ I  LC+ +R  EA    + L  K    DV  Y  LV G C+              
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 266 ----------------------GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                                 GNI  A  +  ++K  G+ P+++ Y+ +I+++C+ G++
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  M   G  PN +T++ L+    K  + +  L    +M  +G +A    Y+ L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I  HCK GKL  A  + + M+  G  PN   +  +     K G+++ A R+Y +M     
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PNT T+  L+     +       KL  EM E  V PN  TY +LI  +C  G+   A++
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            + EM+ EK L P +  Y  ++  L   G++ +  E +  +
Sbjct: 552 LLDEMV-EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 177/414 (42%), Gaps = 38/414 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K+ +   A    D M +  ++  V  ++ L+  Y + G    A   ++ M 
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G +P+   F+ +IS LC   R +EA   F  + +    P+ + Y  L+ G C+ GN  
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +  EM   G+ P+ YTY  +I  LC  G+++ A +   ++     + N + F+ L+
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607

Query: 330 RVHVKASRTE-----------------------------------KVLQVYNQMKRLGCE 354
             + K  R +                                    ++ +  QM   G  
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D + Y  +ID + K G L+ A  + + MV +GC PN  T+  +   + K+G ++ A  +
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +M      PN  TY   +    +  + +  ++L   + E  +  N  TY ILI  +C 
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL-ANTVTYNILIRGFCK 786

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +G    A + +  MI+   + P    Y  ++ +  R G L++  +L E M++RG
Sbjct: 787 LGRIQEAAEVLVNMIDSG-ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 839



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 161/357 (45%), Gaps = 2/357 (0%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           + LM    +   + T S ++   +R      A+H F+ +   G  PD   ++ V+  LC 
Sbjct: 168 VRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCE 227

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
            +    A+     ++    +  V  Y   +RG C+   + EA  +   +   G++ +V T
Sbjct: 228 LKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGT 287

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y  ++  LC+  +     ++  EM+E G  P+    +NL+    K         + N++K
Sbjct: 288 YCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK 347

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G       YN LI+  CKDGKL++A  + N+M  KG  PN  T++++     K G ++
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLD 407

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A    GKM ++  +     Y+ L+              L  EM  N ++PNV  Y  LI
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           + YC  G  +NA++   EM   K + P +  +  ++  L  A ++ +  +L  +MV+
Sbjct: 468 SGYCKEGELHNAFRLYHEM-TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 2/310 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F++ ++    ++    FS L+  Y + G   +A+ A   M   G A D + +S++I 
Sbjct: 584 AREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIY 643

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            + R++           + D+   PD ++YT ++    +AGN+  A  ++  M   G  P
Sbjct: 644 GILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLP 703

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+ +I+ LC+ G + +A  +  EML     PN  T+   +         EK +Q++
Sbjct: 704 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 763

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + +   G  A+T+TYN LI   CK G++++A +VL +M+  G +P+  +++ I     + 
Sbjct: 764 DVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 822

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A +++  M +    P+TV YN L+     +       +L+ +M    V+PN  TY
Sbjct: 823 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 882

Query: 466 RILITMYCGM 475
             LI   C M
Sbjct: 883 NSLIHGTCLM 892



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 158/358 (44%), Gaps = 38/358 (10%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L+  + + G    A    + M E G  PD   +  +IS LC   R SEA+ F + L
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 245 KDKFEP-DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + + +  + + ++ L+ G+C+ G + +A    REM   G+  ++  YS++I  + R    
Sbjct: 592 QGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDR 651

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               D+  +M + G  P+++ +  ++  + KA   +    +++ M   GC  + +TY  L
Sbjct: 652 RSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTAL 711

Query: 364 IDCHCK-----------------------------------DGKLEDAIKVLNSMVRKGC 388
           I+  CK                                   +G +E AI+ L+ ++ +G 
Sbjct: 712 INGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGF 770

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             N  T+N++ R   KLG +  A  +   M D    P+ ++Y+ ++  +         +K
Sbjct: 771 LANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIK 830

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L + M    V P+   Y  LI   C  G    A++ +R+ +  + +KP  + Y  ++ 
Sbjct: 831 LWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE-LRDDMMRRGVKPNRATYNSLIH 887



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 2/223 (0%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  LY  MI+   K     +A+   D+M S      V T++ L+    + GL  +A   
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA 265
              M      P++  ++  +  L  +    +A    D L + F  + + Y  L+RG+C+ 
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKL 787

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G I EA  V   M  +GI P+  +YS +I   CR G +  A  ++  ML  G  P+++ +
Sbjct: 788 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAY 847

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           N L+          K  ++ + M R G + +  TYN LI   C
Sbjct: 848 NFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 130/327 (39%), Gaps = 36/327 (11%)

Query: 238 QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           +SF DS +       + +  L++ + +     +   V R M   GI P + T S V++ L
Sbjct: 131 ESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGL 190

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
            R  Q   A  +F E++  G  P+   +  ++R   +     +  +V  +M+  GC+   
Sbjct: 191 IRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSV 250

Query: 358 ITYNFLIDCHCKDGKLEDAIKV-----------------------------------LNS 382
            TYN  I   CK+ ++ +A+++                                   +N 
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M+  G  P+ +  + +   + K G++  A  +  K+K     P+   YN L+        
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D    L   M    + PN  TY ILI  +C  G  + A  ++ +M E   +K     Y 
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG-IKATVYPYS 429

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++    + G+L+  + L ++M+  G 
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGL 456



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 1/125 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++IL+R + + G   EA      M + G +PD I++S +I   CR+    EA   ++S+
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++   PD + Y  L+ G C  G +++A  +  +M   G++PN  TY+ +I   C    +
Sbjct: 836 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 895

Query: 304 TRAHD 308
           +   D
Sbjct: 896 SSTAD 900


>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04760, chloroplastic-like [Glycine max]
          Length = 531

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 184/385 (47%), Gaps = 8/385 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +I           A  F + +   N   TV T++IL+   +  G   EA+ 
Sbjct: 121 SPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATLLQGGIDEAIK 180

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M E    PD   ++ +I  +CR+     A     S+  K +  DVI Y  L+R   
Sbjct: 181 LLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKGYALDVITYNILLRSLX 239

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G       +  +M   G + NV TYS++I +LCR G++     +  +M + G EP+  
Sbjct: 240 NQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGY 299

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            ++ L+ V  K  R +  ++V + M   GC  D + YN ++ C CK  + ++A+ +   +
Sbjct: 300 CYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL 359

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC+PNAS++N +F  +   G    A  M  +M D   +P+ + YN L+         
Sbjct: 360 GEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLD-XVDPDVIAYNSLISCLCRDGMV 418

Query: 444 DMVLKL--KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
           D  ++L    EME +E +P+V +Y I++   C +G  ++A + +  M+++ CL P  + Y
Sbjct: 419 DEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCL-PNETTY 477

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVD 526
             +++ +   G L    +L   +V+
Sbjct: 478 TFLIEGIGFGGWLNDARDLATTLVN 502



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 173/364 (47%), Gaps = 39/364 (10%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
           A    +RM+  G +PD + ++I+I  LC +     A  F + L K+ F P V+ YT L+ 
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
                G I EA ++  EM    +QP+V+ Y+ +I  +CR G + RA +V + +   G   
Sbjct: 168 ATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSII-XMCREGYVDRAFEVISSISSKGYAL 226

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED----- 375
           + IT+N L+R      + E   ++ + M   GCEA+ +TY+ LI   C+DGK+E+     
Sbjct: 227 DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLL 286

Query: 376 ------------------------------AIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
                                         AI+VL+ M+  GC P+   +N I  C+ K 
Sbjct: 287 KDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 346

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
              + A  ++ K+ ++ C PN  +YN +     +S      L +  EM +  V+P+V  Y
Sbjct: 347 KRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLD-XVDPDVIAY 405

Query: 466 RILITMYCGMGHWNNAYKYIREM-IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             LI+  C  G  + A + + +M +E    KP    Y +VL  L R G++    E++  M
Sbjct: 406 NSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAM 465

Query: 525 VDRG 528
           VD+G
Sbjct: 466 VDKG 469



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 45/235 (19%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I +  K  + DLA   +D+M S      +  ++ ++    +   A EA+  F ++ 
Sbjct: 301 YDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLG 360

Query: 211 EYGCAP----------------------------------DKIAFSIVISILCRKRRASE 236
           E GC+P                                  D IA++ +IS LCR     E
Sbjct: 361 EVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXVDPDVIAYNSLISCLCRDGMVDE 420

Query: 237 AQSFFDSLK---DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           A      ++    + +P V+ Y  ++ G CR G +S+A  V   M   G  PN  TY+ +
Sbjct: 421 AIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFL 480

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           I+ +   G +  A D+   ++ +    ++I+ ++  R++    +T   L VY Q+
Sbjct: 481 IEGIGFGGWLNDARDLATTLVNM----DAISEHSFERLY----KTFCKLDVYRQL 527


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 187/394 (47%), Gaps = 2/394 (0%)

Query: 137 WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA 196
           ++     FV + +  ++M++L  K+ +  +AW     M   N+  ++ TF+I++    + 
Sbjct: 170 YLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKE 229

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
           G   +A      ME  G  P+ + ++ +I   C + +   A+  F ++KDK  EPD   Y
Sbjct: 230 GKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTY 289

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            + + G C+ G + EA  +  +M   G+ PN  TY+ +ID  C  G + +A+    EM+ 
Sbjct: 290 NSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMIS 349

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G   + +T+N  +       R      +  +M+  G   D +T+N LI+ +C+ G  + 
Sbjct: 350 KGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKR 409

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A  +L+ MV KG  P   T+  +   + K   +  A  ++ K++     P+ + +N L+ 
Sbjct: 410 AFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALID 469

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
               + + D   +L KEM+  +V P+  TY  L+  YC  G    A + + EM + + +K
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEM-KRRGIK 528

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           P    Y  ++    + G ++    + ++M+  GF
Sbjct: 529 PDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF 562



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 189/405 (46%), Gaps = 37/405 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ MIN+  K  +   A  FI  M++  V+  V T++ ++  +   G    A   F  M+
Sbjct: 219 FNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMK 278

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNI- 268
           + G  PD   ++  IS LC++ R  EA       L+    P+ + Y  L+ G+C  G++ 
Sbjct: 279 DKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLD 338

Query: 269 ----------------------------------SEAERVFREMKMAGIQPNVYTYSIVI 294
                                              +A+ + +EM+  G+ P+  T++I+I
Sbjct: 339 KAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILI 398

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +  CRCG   RA  +  EM+  G +P  +T+ +L+ V  K +R ++   +++++++ G  
Sbjct: 399 NGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLL 458

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D I +N LID HC +G ++ A ++L  M      P+  T+N + +   + G V  A ++
Sbjct: 459 PDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQL 518

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +MK    +P+ ++YN L+  ++         +++ EM     +P + TY  LI   C 
Sbjct: 519 LDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCK 578

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
                +A + ++EM+  K + P  S Y  +++ +     L+ +++
Sbjct: 579 NQEGEHAEELLKEMV-SKGITPDDSTYLSIIEAMETVDDLEGNDD 622



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 142/311 (45%), Gaps = 11/311 (3%)

Query: 223 IVISILCRKRRASEAQSFFDSL---KDKFEPDV-IVYTNLVRGWCRAGNISEAERVFREM 278
           +++S  C  R      + FD L   +D+ +    +++  LVR +C     +EA   F  +
Sbjct: 119 LILSPTCTNR------TIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLI 172

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           K  G  PN+ T + ++    +  +   A  ++AEM  +    +  TFN ++ V  K  + 
Sbjct: 173 KEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKL 232

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +K  +    M+ LG + + +TYN +I  HC  GK + A  +  +M  KG  P+  T+N  
Sbjct: 233 KKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSF 292

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + K G +  A  +  KM +    PN VTYN L+  +      D     + EM    +
Sbjct: 293 ISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGI 352

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
             ++ TY + I      G   +A   I+EM  EK + P +  + +++    R G  ++  
Sbjct: 353 MASLVTYNLFIHALFMEGRMGDADNMIKEM-REKGMMPDAVTHNILINGYCRCGDAKRAF 411

Query: 519 ELVEKMVDRGF 529
            L+++MV +G 
Sbjct: 412 GLLDEMVGKGI 422


>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 407

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 203/415 (48%), Gaps = 42/415 (10%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFS 187
           + L FFNWV     F H+ + ++ MI++ GK  +F+  W  I+ M   N E   +  TF 
Sbjct: 23  KALEFFNWVEKESGFRHTTETFNRMIDILGKYFEFETCWALINRMIG-NPESLPNHVTFR 81

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           I+ +RYV A L  EA+ A+++++++    D  +F  ++  LC  +   EA+         
Sbjct: 82  IVFKRYVTAHLVQEAIDAYDKLDDFNLR-DDTSFYNLVDALCEHKHVVEAEELC------ 134

Query: 248 FEPDVI----------VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           F  +VI          ++  ++RGW + G   + +  + +M   G+  ++++YSI +D +
Sbjct: 135 FGKNVIAHGFSVSNTKIHNLILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSYSIYMDIM 194

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C+ G+  +A  ++ EM     + + + +N ++R    +   E  ++V+ +M+  GCE + 
Sbjct: 195 CKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 254

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            T+N +I   C+DG++ DA ++L+ M +KGC P++ ++  +F  + K  ++     ++G+
Sbjct: 255 ATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISYMCLFSRLEKPSEILS---LFGR 311

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M      P   TY +LM+ F        VL + K M+E+   P+   Y  +I      G 
Sbjct: 312 MIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGM 371

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
            + A +Y  EMI E+ L P                  ++  ELVEK +D     R
Sbjct: 372 LDMAREYEEEMI-ERGLSP------------------RRRPELVEKSLDETLVCR 407


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 198/419 (47%), Gaps = 6/419 (1%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           TV  ++++ C  +       +    +  T RP+ V     Y  +I   G+  + D A+  
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVT----YCSLIEGLGRHGRVDEAYKL 501

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
            + M   N       ++ L+R + + G   +    +N M   GC+PD +  +  +  + +
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 231 KRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                + ++ F  +K+  F PD   YT L+ G  +AG   EA  +F  MK  G   +   
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ VID  C+ G++ +A+ +  EM   G EP  +T+ +++    K  R ++   ++ + K
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G E + + Y+ LID   K G++++A  ++  +++KG  PN  T+N +   + K  +++
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A   +  MKDLKC PN +TY+IL+      +  +      +EM++   +PNV TY  +I
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +     G+   A   + E  +EK     S++Y  +++ L  A +      L E+   +G
Sbjct: 802 SGLAKAGNIVEA-DTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 208/459 (45%), Gaps = 40/459 (8%)

Query: 109 PSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAW 168
           PS V +    SC  R G  + + L  F  +  + + + +   Y+ MI++  K  + + A 
Sbjct: 373 PSVVSYNCILSCLGRKG-QVDEALKKFEEM--KKDAIPNLSTYNIMIDMLCKAGKLETAL 429

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
              D MK   +   V T +I+V R  +A    +A   F  ++   C PD + +  +I  L
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 229 CRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            R  R  EA   ++ + D  + P+ +VYT+L+R + + G   +  +++ EM   G  P++
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
              +  +D + + G+I +   +F E+  +G  P++ ++  L+   VKA    +  +++  
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           MK  GC  DT  YN +ID  CK GK+  A ++L  M  KG  P   T+  +   ++K+  
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT--- 464
           ++ A+ ++ + K    E N V Y+ L+  F      D    + +E+ +  + PNV T   
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729

Query: 465 --------------------------------YRILITMYCGMGHWNNAYKYIREMIEEK 492
                                           Y ILI   C +  +N A+ + +EM +++
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM-QKQ 788

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             KP    Y  ++  L +AG + + + L EK  ++G  A
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVA 827



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 188/418 (44%), Gaps = 38/418 (9%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  LY+  I+  GK  + D+AW F   MK+  + +   T++ ++    +A    EAV  
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327

Query: 206 FNRMEE-----------------------------------YGCAPDKIAFSIVISILCR 230
           F  M++                                    GC P  ++++ ++S L R
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           K +  EA   F+ +K    P++  Y  ++   C+AG +  A  V   MK AG+ PNV T 
Sbjct: 388 KGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITV 447

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I++D LC+  ++  A  +F  +    C P+++T+ +L+    +  R ++  ++Y QM  
Sbjct: 448 NIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD 507

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                + + Y  LI    K G+ ED  K+ N M+R GC+P+    N    C+ K G++  
Sbjct: 508 ANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK 567

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              ++ ++K+L   P+  +Y IL+     +       +L   M+E     +   Y  +I 
Sbjct: 568 GRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID 627

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +C  G  N AY+ + EM + K  +P    Y  V+  L +  +L +   L E+   +G
Sbjct: 628 GFCKSGKVNKAYQLLEEM-KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKG 684



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 194/399 (48%), Gaps = 9/399 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +++F W     +  H  + Y+ ++ +  + R+F+     ++ M       + +T   +V 
Sbjct: 114 VNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVL 173

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEP 250
            ++++    EA      M +    P   A++ +I  L   R +    + F  +++  +  
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V ++T L+R + R G +  A  +  EMK   ++P+V  Y++ ID   + G++  A   F
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFF 293

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM---KRLGCEADTITYNFLIDCH 367
            EM   G   + +T+ +++ V  KA R  + ++++  M   K++ C      YN +I  +
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC---AYAYNTMIMGY 350

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
              GK EDA  +L    RKGC P+  ++N I  C+ + G V+ A + + +MK     PN 
Sbjct: 351 GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNL 409

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TYNI++ M   +   +  L ++  M++  + PNV T  I++   C     ++A   I E
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS-IFE 468

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++ K  +P +  Y  +++ L R G++ +  +L E+M+D
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD 507



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 150/331 (45%), Gaps = 48/331 (14%)

Query: 147 SPDL-----YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVRAGLA 199
           SPDL     Y + +  AG++ +    +  I     +N+    D  +++IL+   V+AG A
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEI-----KNLGFIPDARSYTILIHGLVKAGFA 600

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------ 247
            EA   F  M+E GC  D  A++ VI   C+  + ++A    + +K K            
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSV 660

Query: 248 ------------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
                                    E +V++Y++L+ G+ + G I EA  +  E+   G+
Sbjct: 661 IDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 720

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            PNVYT++ ++DAL +  +I+ A   F  M ++ C PN IT++ L+    K  +  K   
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFV 780

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            + +M++ G + +  TY  +I    K G + +A  +      KG   +++ +N I   +S
Sbjct: 781 FWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLS 840

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
                + A+R++ + +   C   T T  +L+
Sbjct: 841 NANRASDAYRLFEEARLKGCSIYTKTCVVLL 871



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 121/244 (49%), Gaps = 4/244 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P +  Y  +I+   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA 
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
                + + G  P+   ++ ++  L +    SEA   F S+KD K  P+ I Y+ L+ G 
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+    ++A   ++EM+  G +PNV+TY+ +I  L + G I  A  +F +  E G   +S
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADS 829

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             +N ++     A+R     +++ + +  GC   T T   L+D   K   +E A  ++ +
Sbjct: 830 AIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA-AIVGA 888

Query: 383 MVRK 386
           ++R+
Sbjct: 889 VLRE 892


>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g73400, mitochondrial; Flags: Precursor
 gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 568

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 188/401 (46%), Gaps = 13/401 (3%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRNVEIT-VDTFSI 188
           FF W   +  + H P  Y+EMI++      K +QF +    +D MK  N  +  VD    
Sbjct: 145 FFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLE 204

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R+Y    L      A  +       P+  AF++++  LC+     E ++    ++ + 
Sbjct: 205 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRV 264

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PD   +  L  GWCR  +  +A ++  EM  AG +P  +TY   ID  C+ G +  A D
Sbjct: 265 KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAAD 324

Query: 309 VFAEMLEVGCE---PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +F  M+  G     P + TF  ++    K  + E+  ++  +M   GC  D  TY  +I+
Sbjct: 325 LFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIE 384

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C   K+++A K L+ M  KG  P+  T+N   R + +    + A ++YG+M + +C P
Sbjct: 385 GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAP 444

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK-- 483
           +  TYN+L+ MF      D       EM++ +   +V TY  +I    G+   + A +  
Sbjct: 445 SVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN---GLFDCHRAKEAC 501

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           ++ E +  K LK    V++  L +L   G L+   ++ E M
Sbjct: 502 FLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 35/295 (11%)

Query: 134 FFNWVTAR-PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           FF W   R P+   +  L  EMI    K   F                    T+   +  
Sbjct: 275 FFGWCRVRDPK--KAMKLLEEMIEAGHKPENF--------------------TYCAAIDT 312

Query: 193 YVRAGLAAEAVHAFNRMEEYGCA---PDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           + +AG+  EA   F+ M   G A   P    F+++I  L +  +A E       +     
Sbjct: 313 FCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 372

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDV  Y +++ G C A  + EA +   EM   G  P++ TY+  +  LC   +   A  
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK 432

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY----NFLI 364
           ++  M+E  C P+  T+N L+ +  +    +     + +M +  C  D  TY    N L 
Sbjct: 433 LYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF 492

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           DCH    + ++A  +L  +V KG       F+     +S++G++   H++   MK
Sbjct: 493 DCH----RAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 194/399 (48%), Gaps = 7/399 (1%)

Query: 135 FNWVTARPEFVHSPDLYHE--MINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILV 190
            N V + P+ V++   + E  + +L   +R  +L     F++ M ++     V   + L+
Sbjct: 62  LNGVESSPDRVNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALI 121

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           R + + G    A      +EE G   D  +++++IS  C+     EA    D +     P
Sbjct: 122 REFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMG--VSP 179

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   Y  ++   C  G + +A +V      +   P+V T +++IDA C+   + +A  +F
Sbjct: 180 NAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLF 239

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM   GC+P+ +T+N L++   K  R ++ ++   ++   GC+ D I++N ++   C  
Sbjct: 240 NEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSG 299

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+  DA+K+L +M+RKGC P+  TFN++   + + G +  A  +   M      PN+ ++
Sbjct: 300 GRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSF 359

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           N L+Q F   K  D  ++  + M      P++ TY IL+T  C  G  ++A   + ++  
Sbjct: 360 NPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 419

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + C  P    Y  V+  L + G+ +   EL+E+M  +G 
Sbjct: 420 KGC-SPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGL 457



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 171/353 (48%), Gaps = 2/353 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T ++L+    +     +A+  FN M   GC PD + ++++I   C+  R  EA  F  
Sbjct: 216 VVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLK 275

Query: 243 SLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            L     +PDVI +  ++R  C  G   +A ++   M   G  P+V T++I+I+ LC+ G
Sbjct: 276 KLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKG 335

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            + +A +V   M + G  PNS +FN L++        ++ ++    M   GC  D +TYN
Sbjct: 336 LLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYN 395

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+   CKDGK++DA+ +L+ +  KGC+P+  ++N +   + K+G    A  +  +M   
Sbjct: 396 ILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK 455

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +P+ +T   ++   +        +K    ++   + PN   Y  +IT  C     + A
Sbjct: 456 GLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLA 515

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
             ++ +M+ + C KP  + Y  +++ +   G  +   +L  ++  RG   R L
Sbjct: 516 IDFLADMVAKGC-KPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSL 567



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 4/272 (1%)

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +R   R G + E  R    M   G  P+V   + +I   C+ G+   A  +   + E G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
             +  ++N L+  + K+   E+ L+V   + R+G   +  TY+ ++   C  GKL+ A++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRV---LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           VL   ++  C P+  T  ++     K   V  A +++ +M++  C+P+ VTYN+L++ F 
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
                D  ++  K++     +P+V ++ +++   C  G W +A K +  M+ + CL P  
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCL-PSV 321

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             + +++  L + G L K   ++E M   G T
Sbjct: 322 VTFNILINFLCQKGLLGKALNVLEMMPKHGHT 353



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 150/328 (45%), Gaps = 8/328 (2%)

Query: 130 QVLSFFNWV---TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           Q +  FN +     +P+ V     Y+ +I    K  + D A  F+  + S   +  V + 
Sbjct: 234 QAMKLFNEMRNKGCKPDVVT----YNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISH 289

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-K 245
           ++++R     G   +A+     M   GC P  + F+I+I+ LC+K    +A +  + + K
Sbjct: 290 NMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPK 349

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               P+   +  L++G+C    I  A      M   G  P++ TY+I++ ALC+ G++  
Sbjct: 350 HGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDD 409

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  + +++   GC P+ I++N ++   +K  + E  +++  +M   G + D IT   ++ 
Sbjct: 410 AVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVG 469

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              ++GK+ +A+K  + + R    PNA  +N I   + K    + A      M    C+P
Sbjct: 470 GLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKP 529

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEM 453
              TY  L++        +   KL  E+
Sbjct: 530 TEATYTTLIKGITYEGLAEDASKLSNEL 557


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 198/419 (47%), Gaps = 6/419 (1%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           TV  ++++ C  +       +    +  T RP+ V     Y  +I   G+  + D A+  
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVT----YCSLIEGLGRHGRVDEAYKL 501

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
            + M   N       ++ L+R + + G   +    +N M   GC+PD +  +  +  + +
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 231 KRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                + ++ F  +K+  F PD   YT L+ G  +AG   EA  +F  MK  G   +   
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ VID  C+ G++ +A+ +  EM   G EP  +T+ +++    K  R ++   ++ + K
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G E + + Y+ LID   K G++++A  ++  +++KG  PN  T+N +   + K  +++
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A   +  MKDLKC PN +TY+IL+      +  +      +EM++   +PNV TY  +I
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +     G+   A   + E  +EK     S++Y  +++ L  A +      L E+   +G
Sbjct: 802 SGLAKAGNIVEA-DTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 208/459 (45%), Gaps = 40/459 (8%)

Query: 109 PSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAW 168
           PS V +    SC  R G  + + L  F  +  + + + +   Y+ MI++  K  + + A 
Sbjct: 373 PSVVSYNCILSCLGRKG-QVDEALKKFEEM--KKDAIPNLSTYNIMIDMLCKAGKLETAL 429

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
              D MK   +   V T +I+V R  +A    +A   F  ++   C PD + +  +I  L
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 229 CRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            R  R  EA   ++ + D  + P+ +VYT+L+R + + G   +  +++ EM   G  P++
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
              +  +D + + G+I +   +F E+  +G  P++ ++  L+   VKA    +  +++  
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           MK  GC  DT  YN +ID  CK GK+  A ++L  M  KG  P   T+  +   ++K+  
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT--- 464
           ++ A+ ++ + K    E N V Y+ L+  F      D    + +E+ +  + PNV T   
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729

Query: 465 --------------------------------YRILITMYCGMGHWNNAYKYIREMIEEK 492
                                           Y ILI   C +  +N A+ + +EM +++
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM-QKQ 788

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             KP    Y  ++  L +AG + + + L EK  ++G  A
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVA 827



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 187/418 (44%), Gaps = 38/418 (9%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  LY+  I+  GK  + D+AW     MK+  + +   T++ ++    +A    EAV  
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327

Query: 206 FNRMEE-----------------------------------YGCAPDKIAFSIVISILCR 230
           F  M++                                    GC P  ++++ ++S L R
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           K +  EA   F+ +K    P++  Y  ++   C+AG +  A  V   MK AG+ PNV T 
Sbjct: 388 KGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITV 447

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I++D LC+  ++  A  +F  +    C P+++T+ +L+    +  R ++  ++Y QM  
Sbjct: 448 NIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD 507

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                + + Y  LI    K G+ ED  K+ N M+R GC+P+    N    C+ K G++  
Sbjct: 508 ANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK 567

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              ++ ++K+L   P+  +Y IL+     +       +L   M+E     +   Y  +I 
Sbjct: 568 GRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID 627

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +C  G  N AY+ + EM + K  +P    Y  V+  L +  +L +   L E+   +G
Sbjct: 628 GFCKSGKVNKAYQLLEEM-KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKG 684



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 194/399 (48%), Gaps = 9/399 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +++F W     +  H  + Y+ ++ +  + R+F+     ++ M       + +T   +V 
Sbjct: 114 VNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVL 173

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEP 250
            ++++    EA      M +    P   A++ +I  L   R +    + F  +++  +  
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V ++T L+R + R G +  A  +  EMK   ++P+V  Y++ ID   + G++  A   F
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXF 293

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM---KRLGCEADTITYNFLIDCH 367
            EM   G   + +T+ +++ V  KA R  + ++++  M   K++ C      YN +I  +
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC---AYAYNTMIMGY 350

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
              GK EDA  +L    RKGC P+  ++N I  C+ + G V+ A + + +MK     PN 
Sbjct: 351 GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNL 409

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TYNI++ M   +   +  L ++  M++  + PNV T  I++   C     ++A   I E
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS-IFE 468

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++ K  +P +  Y  +++ L R G++ +  +L E+M+D
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD 507



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 150/331 (45%), Gaps = 48/331 (14%)

Query: 147 SPDL-----YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVRAGLA 199
           SPDL     Y + +  AG++ +    +  I     +N+    D  +++IL+   V+AG A
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEI-----KNLGFIPDARSYTILIHGLVKAGFA 600

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK------------ 247
            EA   F  M+E GC  D  A++ VI   C+  + ++A    + +K K            
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSV 660

Query: 248 ------------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
                                    E +V++Y++L+ G+ + G I EA  +  E+   G+
Sbjct: 661 IDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 720

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            PNVYT++ ++DAL +  +I+ A   F  M ++ C PN IT++ L+    K  +  K   
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFV 780

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            + +M++ G + +  TY  +I    K G + +A  +      KG   +++ +N I   +S
Sbjct: 781 FWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLS 840

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
                + A+R++ + +   C   T T  +L+
Sbjct: 841 NANRASDAYRLFEEARLKGCSIYTKTCVVLL 871



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 3/223 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P +  Y  +I+   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA 
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
                + + G  P+   ++ ++  L +    SEA   F S+KD K  P+ I Y+ L+ G 
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+    ++A   ++EM+  G +PNV+TY+ +I  L + G I  A  +F +  E G   +S
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADS 829

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
             +N ++     A+R     +++ + +  GC   T T   L+D
Sbjct: 830 AIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLD 872



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 36/204 (17%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+  GKV + D A+  ++ +  + +   V T++ L+   V+A   +EA+  F  M
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
           ++  C P+ I +SI+I  LC+ R+ ++A  F+  + K  F+P+V  YT ++ G  +AGNI
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810

Query: 269 SEAE-----------------------------------RVFREMKMAGIQPNVYTYSIV 293
            EA+                                   R+F E ++ G      T  ++
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVL 870

Query: 294 IDALCRCGQITRAHDVFAEMLEVG 317
           +D+L +   I +A  V A + E  
Sbjct: 871 LDSLHKAECIEQAAIVGAVLRETA 894


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 179/378 (47%), Gaps = 36/378 (9%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           + L++ Y + G    A+  F++M E G  P+ + ++++I   C+     +A   ++ +K+
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 247 K-FEPDVIVYTNLVRGW----------------------------------CRAGNISEA 271
           K   P V    +L+RG+                                  C+ G +SEA
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEA 452

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             ++ +M   G++P+V +Y+ +I   C+ G +  A+ VF EMLE G +PN IT++ LM  
Sbjct: 453 CSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDG 512

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           + K   TE    +Y++M+         T N +I+  CK G+  ++   L  +V++G  P 
Sbjct: 513 YFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPT 572

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+N I     K G VN A  +Y +M  +   PN  TY  L+  F  S + D+ LK+  
Sbjct: 573 CMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMD 632

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM+   +E +V  Y  LI  +C  G   NA + + E+ +E  L P   VY  ++   R+ 
Sbjct: 633 EMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL-QEVGLSPNKVVYSSMISGFRKL 691

Query: 512 GQLQKHEELVEKMVDRGF 529
             ++    L ++M++ G 
Sbjct: 692 QNMEAALHLHKRMINEGI 709



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 199/450 (44%), Gaps = 73/450 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K    D A+   + MK++++  TV   + L+R Y++A    EA   F+   
Sbjct: 367 YAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV 426

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G A +   ++ ++S LC++ + SEA S ++ +  K   P V+ Y N++ G C+ G++ 
Sbjct: 427 ACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMD 485

Query: 270 EAERVFREMKMAGIQPNVYTYS-----------------------------------IVI 294
            A  VF EM   G++PN+ TYS                                   I+I
Sbjct: 486 SANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIII 545

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           + LC+ G+ + + D   ++++ G  P  +T+N ++   VK       L VY +M ++G  
Sbjct: 546 NGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVS 605

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            +  TY  LI+  CK   ++ A+KV++ M  KG   + + +  +     + GD+  A ++
Sbjct: 606 PNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQL 665

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK----------------------- 451
             +++++   PN V Y+ ++  F   ++ +  L L K                       
Sbjct: 666 LSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLK 725

Query: 452 ------------EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                       EM    + P++ TY +LI   C  G   NA K + +M + KC+ P   
Sbjct: 726 EGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM-DRKCMTPTVF 784

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +Y  ++    + G LQ+   L  +M+D+G 
Sbjct: 785 IYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 170/356 (47%), Gaps = 38/356 (10%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           K++ VE+    +SI++    +   +  A+     M + G  P ++ F+ VI +  ++ + 
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKM 310

Query: 235 SEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA      +    +P +V+V T L++G+C+ G++  A  +F +M   GI PN  TY+++
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I+  C+ G + +A++++ +M      P     N+L+R ++KA   E+  +++++    G 
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI 430

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
            A+  TYN L+   CK+GK+ +A  +   MVRKG  P+  ++N +     + GD++ A+ 
Sbjct: 431 -ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++                                    EM E  ++PN+ TY +L+  Y 
Sbjct: 490 VF-----------------------------------VEMLEKGLKPNLITYSVLMDGYF 514

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G    A+     M  E  + P      +++  L +AG+  + ++ ++K+V  GF
Sbjct: 515 KKGDTEYAFGLYDRMRGEN-IAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 156/326 (47%), Gaps = 5/326 (1%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHF--IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+L    + + G  ++ D  + F   D M+  N+  +  T +I++    +AG  +E+   
Sbjct: 501 PNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDR 560

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
             ++ + G  P  + ++ +I    ++   + A + +  + K    P+V  YTNL+ G+C+
Sbjct: 561 LKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCK 620

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           + N+  A +V  EMK  GI+ +V  Y  +ID  CR G +  A  + +E+ EVG  PN + 
Sbjct: 621 SNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVV 680

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +++++    K    E  L ++ +M   G   D   Y  LI    K+GKL  A ++   M+
Sbjct: 681 YSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEML 740

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC-EPNTVTYNILMQMFATSKST 443
            KG  P+  T++++   +   G +  A ++   M D KC  P    YN L+       + 
Sbjct: 741 AKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM-DRKCMTPTVFIYNTLITGHFKEGNL 799

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILI 469
               +L  EM +  + P+  TY IL+
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILV 825



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 188/420 (44%), Gaps = 24/420 (5%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINL-------AGKVRQFDLAWHFID------------ 172
           LS+F W + +   + S D    ++++        GK R     +   D            
Sbjct: 82  LSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVARL 141

Query: 173 LMKSRNVEITVDT--FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +  SR ++   D+  F+ L+  YV+     +AV  FN + E    P     +I +S L +
Sbjct: 142 IESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVK 201

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                EA+  ++ +  K  + D    + ++R   R G + EAE  FRE K  G++ +   
Sbjct: 202 NNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARA 261

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           YSIVI+A+C+      A  +  EM + G  P+ + F  ++ V +K  +  + ++V  +M 
Sbjct: 262 YSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEML 321

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G   + +    L+  +CK G L+ A+++ + M   G  PN  T+ +I     K G+++
Sbjct: 322 SCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMD 381

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A+ +Y +MK+    P     N L++ +  ++S +   KL  E     +  NV TY  L+
Sbjct: 382 KAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLL 440

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +  C  G  + A     +M+  K ++P    Y  ++    + G +     +  +M+++G 
Sbjct: 441 SWLCKEGKMSEACSIWEKMV-RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 179/378 (47%), Gaps = 12/378 (3%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWH---FIDLMKSRNVEITVDTFSILVRRYVRAG 197
           RP  V     Y+ MI   G  +Q D+      F+++++ + ++  + T+S+L+  Y + G
Sbjct: 465 RPSVVS----YNNMI--LGHCQQGDMDSANGVFVEMLE-KGLKPNLITYSVLMDGYFKKG 517

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYT 256
               A   ++RM     AP     +I+I+ LC+  R SE+Q     L ++ F P  + Y 
Sbjct: 518 DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYN 577

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            ++ G+ + G+++ A  V+ EM   G+ PNV+TY+ +I+  C+   +  A  V  EM   
Sbjct: 578 CIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK 637

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G E +   +  L+    +        Q+ ++++ +G   + + Y+ +I    K   +E A
Sbjct: 638 GIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAA 697

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           + +   M+ +G   +   +  +   + K G +  A  +Y +M      P+ +TY++L+  
Sbjct: 698 LHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHG 757

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                  +   K+ ++M+   + P V  Y  LIT +   G+   A++   EM+ +K L P
Sbjct: 758 LCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEML-DKGLVP 816

Query: 497 GSSVYEMVLQQLRRAGQL 514
             + Y++++    + G L
Sbjct: 817 DDTTYDILVNGKVKDGNL 834


>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15200
 gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 206/414 (49%), Gaps = 20/414 (4%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFV------------HSPDLYHEMI 155
           SP  ++ +++K CG+     L+  +   N    +P ++             S  LY+E++
Sbjct: 92  SPEKIKRILDK-CGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEIL 150

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           ++ GK+R+F+      D M  R+  +   T+ +L+ RY  A    EAV  F R +E+G  
Sbjct: 151 DVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGID 210

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
            D +AF  ++  LCR +    A++ F S + +F  D+     ++ GWC  GN+ EA+R +
Sbjct: 211 DDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFW 270

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           +++  +  +P+V +Y  +I+AL + G++ +A +++  M +    P+    NN++      
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNAS 393
            R  + L+V+ ++   G + + +TYN L+   CK  + E   +++  M  KG  C+PN  
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDV 390

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           TF+ + +   +  DV+    +  +M   KCE  +  YN++ +++      + V ++  EM
Sbjct: 391 TFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEM 447

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           E + + P+  TY I I      G    A  Y +EM+  K + P     EM+L Q
Sbjct: 448 ERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMM-SKGMVPEPRT-EMLLNQ 499



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 4/245 (1%)

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ ++D L +  +    H VF EM +     N  T+  L+  +  A + ++ + V+ + K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-GCNPNASTFNMIFRCISKLGDV 408
             G + D + ++ L+   C+   +E A  +  S  R+ GC+  A   NMI      LG+V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKA--MNMILNGWCVLGNV 263

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A R +  +   KC P+ V+Y  ++            ++L + M +    P+V     +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I   C       A +  RE I EK   P    Y  +L+ L +  + +K  ELVE+M  +G
Sbjct: 324 IDALCFKKRIPEALEVFRE-ISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382

Query: 529 FTARP 533
            +  P
Sbjct: 383 GSCSP 387


>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 193/401 (48%), Gaps = 7/401 (1%)

Query: 131 VLSFFNWVTARPEFVH--SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            L+ F+WV       +  S      +I + GK  +   A   +  +++  V I V  ++ 
Sbjct: 139 ALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTC 198

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK 247
           L+  Y  +G   +AV+ FN+M++ GC P  I +++V+++  +     S   +  ++++ +
Sbjct: 199 LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSR 258

Query: 248 -FEPDVIVYTNLVRGWCRAGNI-SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
              PD+  Y  L+   CR G++  EA  +F++MK+ G  P+  TY+ ++D   +  +   
Sbjct: 259 GVAPDLYTYNTLI-SCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQE 317

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  V  EM   G  P S+T+N+L+  + K    E+ L +  QM   G + D  TY  L+ 
Sbjct: 318 AMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLS 377

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              K GK + AI+V   M   GC PN  TFN + +     G      +++  +K   C P
Sbjct: 378 GFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSP 437

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + VT+N L+ +F  +     V  + KEM+        +T+  LI+ Y   G ++ A    
Sbjct: 438 DIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVY 497

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           + M+E   + P  S Y  VL  L R G  ++ E+++ +M D
Sbjct: 498 KSMLEAGVV-PDLSTYNAVLAALARGGLWEQSEKVLAEMED 537



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/454 (22%), Positives = 206/454 (45%), Gaps = 79/454 (17%)

Query: 151 YHEMINLAGKVRQFDLAWH----FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           Y+ ++N+ GK+    + W      ++ M+SR V   + T++ L+    R  L  EAVH F
Sbjct: 231 YNVVLNVYGKM---GMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLF 287

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF---------------FDSLKDKF--- 248
            +M+  G  PDK+ ++ ++ +  + RR  EA                  ++SL   +   
Sbjct: 288 QQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKG 347

Query: 249 ------------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
                             +PDV  YT L+ G+ +AG    A +VF EM+  G +PN+ T+
Sbjct: 348 GLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTF 407

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + +I      G+      VF ++    C P+ +T+N L+ V  +     +V  ++ +MKR
Sbjct: 408 NALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKR 467

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G  A+  T+N LI  + + G  + A+ V  SM+  G  P+ ST+N +   +++ G    
Sbjct: 468 AGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQ 527

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSK----------------------------- 441
           + ++  +M+D +C+PN ++Y+ L+  +A  K                             
Sbjct: 528 SEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVL 587

Query: 442 ---STDMVLKLKK---EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
               +D++++ ++   E+    + P++ T   ++++Y        A++ +  M E +   
Sbjct: 588 VNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETR-FT 646

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           P  + Y  ++    R+   QK EE++ +++++G 
Sbjct: 647 PSLTTYNSLMYMYSRSENFQKSEEILREVLEKGM 680



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 201/443 (45%), Gaps = 14/443 (3%)

Query: 92  PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHS---P 148
           P  ++   Q   A+  SP++V +    S   + G+ L + L        + + VH    P
Sbjct: 315 PQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGL-LEEALDL------KTQMVHKGIKP 367

Query: 149 DLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           D++     L+G  K  + D A      M++   +  + TF+ L++ +   G  AE +  F
Sbjct: 368 DVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVF 427

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           + ++   C+PD + ++ ++++  +    S+    F  +K   F  +   +  L+  + R 
Sbjct: 428 DDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRC 487

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G+  +A  V++ M  AG+ P++ TY+ V+ AL R G   ++  V AEM +  C+PN +++
Sbjct: 488 GSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSY 547

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           ++L+  +      E++     ++     E   +    L+  + K   L +  +    + R
Sbjct: 548 SSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRR 607

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G +P+ +T N +     +   V  AH +   M + +  P+  TYN LM M++ S++   
Sbjct: 608 RGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQK 667

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             ++ +E+ E  ++P+  +Y  +I  YC  G    A +   EM ++  L P    Y   +
Sbjct: 668 SEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEM-KDSALVPDVVTYNTFI 726

Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
                     +  ++V  M+ +G
Sbjct: 727 ATYAADSMFAEAIDVVRYMIKQG 749



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/317 (20%), Positives = 135/317 (42%), Gaps = 36/317 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV   D ++ +I+   +   FD A      M    V   + T++ ++    R GL  
Sbjct: 467 RAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWE 526

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
           ++      ME+  C P+++++S ++      +      +F + +     E   ++   LV
Sbjct: 527 QSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLV 586

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF--------- 310
               ++  + E ER F E++  GI P++ T + ++    R   + +AH++          
Sbjct: 587 LVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFT 646

Query: 311 --------------------------AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                                      E+LE G +P+ I++N ++  + +  R ++  ++
Sbjct: 647 PSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRI 706

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +++MK      D +TYN  I  +  D    +AI V+  M+++GC P+ +T+N I     K
Sbjct: 707 FSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCK 766

Query: 405 LGDVNGAHRMYGKMKDL 421
           L   + A+     + +L
Sbjct: 767 LDQRHEANSFVKNLSNL 783


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 12/358 (3%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TF+ L+    R G   EAV   +RM E G  P++I +  ++  +C+      A +   
Sbjct: 178 VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLR 237

Query: 243 SLKD--KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            +++    +P+V++Y+ ++ G  + G  S+A  ++ EM+  GI P+++TY+ +ID  C  
Sbjct: 238 KMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSS 297

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+ + A  +  EMLE    PN +T++ L+  +VK  +  +  ++Y++M   G   +TITY
Sbjct: 298 GRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITY 357

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N +ID  CK  +L+ A  +   M  KGC+P+  TFN +         ++    +  +M +
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                +T TYN L+  F      +  L L ++M  + V P++ T   L+   C  G   +
Sbjct: 418 TGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 477

Query: 481 AYKYIREMIEEKC----------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A +  + M + K           ++P    Y +++  L   G+  + EEL ++M  RG
Sbjct: 478 ALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRG 535



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 185/396 (46%), Gaps = 7/396 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F + V +RP  + S   +++++ +  ++ + DL       M+ + +   V +F+IL++ +
Sbjct: 65  FSDMVRSRP--LPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCF 122

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
                   A+  F ++ + G  PD + FS ++  LC + R SEA   F  +     P+V+
Sbjct: 123 CSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---CRPNVV 179

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            +T L+ G CR G + EA  +   M   G+QPN  TY  ++D +C+ G    A ++  +M
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239

Query: 314 LEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
            E+   +PN + ++ ++    K  R      +Y +M+  G   D  TYN +ID  C  G+
Sbjct: 240 EEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGR 299

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             +A ++L  M+ +  NPN  T++ +     K      A  +Y +M      PNT+TYN 
Sbjct: 300 WSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNS 359

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           ++  F      D    +   M      P+V T+  LI  YCG    ++  + + EM E  
Sbjct: 360 MIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG 419

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L   ++ Y  ++      G L    +L ++M+  G
Sbjct: 420 -LVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 174/391 (44%), Gaps = 15/391 (3%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ MI+      ++  A   +  M  R +   V T+S L+  YV+     EA   
Sbjct: 282 PDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEEL 341

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           ++ M   G  P+ I ++ +I   C++ R   A+  F  +  K   PDV  +  L+ G+C 
Sbjct: 342 YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG 401

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           A  I +   +  EM   G+  +  TY+ +I   C  G +  A D+  +M+  G  P+ +T
Sbjct: 402 AKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTITYNFLIDCHCKDGKL 373
            N L+       + +  L+++  M++            G E D  TYN LI     +GK 
Sbjct: 462 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKF 521

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A ++   M  +G  PN  T++ +   + K   ++ A +M+  M      P+ VT+N L
Sbjct: 522 LEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTL 581

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +  +  +   D  L+L  EM    +  +  TY  LI  +  +G+ N A    +EMI    
Sbjct: 582 VSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG- 640

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           + P +     +L  L    +L++   ++E +
Sbjct: 641 VYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 151/316 (47%), Gaps = 12/316 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MI+   K  + D A H   +M ++     V TF+ L+  Y  A    +     + M 
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G   D   ++ +I   C     + A      +      PD++    L+ G C  G + 
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476

Query: 270 EAERVFREMKMA-----------GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +A  +F+ M+ +           G++P+V TY+I+I  L   G+   A +++ EM   G 
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            PN+IT+++++    K SR ++  Q+++ M       D +T+N L+  +CK G+++D ++
Sbjct: 537 VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           +   M R+G   +A T+  +     K+G++NGA  ++ +M      P+T+T   ++ +  
Sbjct: 597 LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLW 656

Query: 439 TSKSTDMVLKLKKEME 454
           + +     + + ++++
Sbjct: 657 SKEELKRAVAMLEDLQ 672



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 14/262 (5%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD++  + +I+     ++ D     +  M    +     T++ L+  +   G    A+ 
Sbjct: 386 SPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALD 445

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK------------DKFEPDV 252
              +M   G  PD +  + ++  LC   +  +A   F +++            +  EPDV
Sbjct: 446 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDV 505

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
             Y  L+ G    G   EAE +++EM   GI PN  TYS +I+ LC+  ++  A  +F  
Sbjct: 506 QTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDS 565

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M      P+ +TFN L+  + KA R +  L+++ +M R G  AD ITY  LI    K G 
Sbjct: 566 MGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGN 625

Query: 373 LEDAIKVLNSMVRKGCNPNAST 394
           +  A+ +   M+  G  P+  T
Sbjct: 626 INGALDIFQEMISSGVYPDTIT 647



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 4/223 (1%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A D+F++M+     P+ I FN LM V V+  R + V+ +Y +M+R     D  ++N LI 
Sbjct: 61  AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           C C   KL  A+     + + G  P+  TF+ +   +     V+ A  ++ +M    C P
Sbjct: 121 CFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRP 176

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N VT+  LM            + L   M E+ ++PN  TY  ++   C +G   +A   +
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLL 236

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           R+M E   +KP   +Y  ++  L + G+      L  +M ++G
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG 279



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 5/157 (3%)

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           LEDAI + + MVR    P+   FN +   + ++   +    +Y KM+  +   +  ++NI
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L++ F +       L    ++ +   +P+V T+  L+   C     + A     +M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC--- 174

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +P    +  ++  L R G++ +   L+++MV+ G 
Sbjct: 175 --RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 209


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 38/416 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM- 209
           YH +IN    +   + A   +  M  + V   V T+++L++ Y +     EA      M 
Sbjct: 230 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 289

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
           EE    PD+ A+ ++I   CR  +  +A    D  L+   + ++ +  +L+ G+C+ G I
Sbjct: 290 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 349

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EAE V   M    ++P+ Y+Y+ ++D  CR G  + A ++  +ML+ G EP  +T+N L
Sbjct: 350 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 409

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   +    +  LQ+++ M + G   D + Y+ L+D   K    E A  +   ++ +G 
Sbjct: 410 LKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 469

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             +  TFN +   + K+G +  A  ++ KMKDL C P+ +TY  L+  +  + +     K
Sbjct: 470 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 529

Query: 449 LKKEMEENEVE-----------------------------------PNVNTYRILITMYC 473
           +K  ME   +                                    PN+ TY  LI  +C
Sbjct: 530 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 589

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G  + A+    EM E   L     +   ++  L R G++ +   L++KMVD GF
Sbjct: 590 KEGMLDKAFSSYFEMTENG-LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 186/459 (40%), Gaps = 105/459 (22%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           +T   ++   PD Y     L G  R+     A++  D M    +E TV T++ L++   R
Sbjct: 356 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 415

Query: 196 AGLAAEAVHAFNRMEEYGCAPD-----------------------------------KIA 220
            G   +A+  ++ M + G APD                                   +I 
Sbjct: 416 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 475

Query: 221 FSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV----- 274
           F+ +IS LC+  +  EA+  FD +KD    PD I Y  L+ G+C+A N+ +A +V     
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 535

Query: 275 ------------------------------FREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
                                           EM + G+ PN+ TY  +ID  C+ G + 
Sbjct: 536 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 595

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG------------ 352
           +A   + EM E G   N I  + ++    +  R ++   +  +M   G            
Sbjct: 596 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 655

Query: 353 ----------------CEA----DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
                           C+     + I YN  I   CK GK++DA +  + +  KG  P+ 
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+  +    S  G+V+ A R+  +M      PN VTYN L+     S++ D   +L  +
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 775

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
           + +  + PNV TY  LI  YC +G+ + A+K   +MIEE
Sbjct: 776 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 186/454 (40%), Gaps = 90/454 (19%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF----IDLMK------------ 175
           L FF +V+ +  F  +   Y +++++  + R +D    +    +DL K            
Sbjct: 52  LGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDEL 111

Query: 176 ---SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
               R    +   F ++++ YV  GL   A++ F+ M + G  P                
Sbjct: 112 VGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIP---------------- 155

Query: 233 RASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
                     SL+           +L+    + G    A  V+++M   GI P+V+  SI
Sbjct: 156 ----------SLRS--------CNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 197

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++A C+ G++  A     +M  +G EPN +T+++L+  +V     E    V   M   G
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257

Query: 353 CEADTITYNF------------------------------------LIDCHCKDGKLEDA 376
              + +TY                                      LID +C+ GK++DA
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 317

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +++L+ M+R G   N    N +     K G+++ A  +  +M D   +P++ +YN L+  
Sbjct: 318 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 377

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           +     T     L  +M +  +EP V TY  L+   C +G +++A + I  ++ ++ + P
Sbjct: 378 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ-IWHLMMKRGVAP 436

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               Y  +L  L +    +    L + ++ RGFT
Sbjct: 437 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 470



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 33/278 (11%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S ++Y+ +I+   K R+       +  M  R +   + T+  L+  + + G+  +A  ++
Sbjct: 542 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 601

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEA---------QSFF---------------- 241
             M E G + + I  S ++S L R  R  EA           FF                
Sbjct: 602 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 661

Query: 242 --------DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
                   +S K    P+ IVY   + G C+ G + +A R F  + + G  P+ +TY  +
Sbjct: 662 QKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTL 721

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I      G +  A  +  EML  G  PN +T+N L+    K+   ++  ++++++ + G 
Sbjct: 722 IHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL 781

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             + +TYN LID +CK G ++ A K+ + M+ +G +P+
Sbjct: 782 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 819


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 165/356 (46%), Gaps = 2/356 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M++  +  TV T++ ++    R+G    A   F  M   G  PD I ++ +I+  C+   
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   F  LK     P V+ Y  L+ G+CR G++ EA R  +EM   G QP+V TY+I
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++   +   +    + F EML  G +P+   +N  +   +    T +  Q+   M   G
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
             +DT+TYN  +D  CK G L+DA  +   MV  G  P+  T+  +     + G +  A 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  M      P+ VTY + +  +    +        ++M E  V PN  TY +LI   
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C MG  N AY++  EM+ E+ L P    Y +++    + G  ++   L  +M   G
Sbjct: 628 CRMGRTNLAYQHFHEML-ERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 170/358 (47%), Gaps = 3/358 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY--GCAPDKIAFSIVISILCRK 231
           M    +E ++ T++ L+  + R G   +A      ME    GC P  + +++VI+ L RK
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281

Query: 232 RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
               +A    D ++   +     +  L+ G+   G++ +A  +  EM+  GI P V TY+
Sbjct: 282 GELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYN 341

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I  + R G +  A   F EM  +G  P+ IT+N+L+  + KA   ++ L ++  +KR 
Sbjct: 342 TIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRA 401

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G     +TYN L+D +C+ G LE+A +    MV +GC P+ ST+ ++     K+ ++   
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMV 461

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              + +M     +P+   YN  +       ST    +L + M    +  +  TY I +  
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            C  G+  +AY    +M+ +  L+P    Y  ++      G+L++  ++ + M+  G 
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDG-LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGL 578



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 166/346 (47%), Gaps = 6/346 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLA-WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           PDL  Y+ +IN   K      A W F DL K   +  +V T++IL+  Y R G   EA  
Sbjct: 370 PDLITYNSLINGYCKAGNLKEALWLFGDL-KRAGLAPSVLTYNILLDGYCRLGDLEEARR 428

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M E GC PD   ++I+++   + R  +  + FFD +  K  +PD   Y   +    
Sbjct: 429 FKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAEL 488

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G+ SEA ++   M   GI  +  TY+I +D LC+ G +  A+ ++ +M+  G +P+ I
Sbjct: 489 ILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCI 548

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+  H +  R  +   +++ M   G     +TY   I  +C+ G L  A      M
Sbjct: 549 TYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKM 608

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + +G  PN  T+N++   + ++G  N A++ + +M +    PN  TY +L+       + 
Sbjct: 609 LEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNW 668

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +  ++L  EM ++ + P+  T+  L   +   G   +A +Y+  ++
Sbjct: 669 EEAIRLYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHAIQYMENVV 713



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 164/362 (45%), Gaps = 38/362 (10%)

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWC 263
           AF  M  +G  P     ++V+  L  + R  + +S + + L+   EP ++ Y  L+  + 
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242

Query: 264 RAGNISEAERVFREMKM--AGIQPNVYTYSIVIDALCRCGQITRAHDV------------ 309
           R G + +A ++ REM+    G  P+  TY++VI+ L R G++ +A  +            
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA 302

Query: 310 ----------FA------------EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
                     FA            EM   G  P  +T+N ++    ++   E     + +
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M+ +G   D ITYN LI+ +CK G L++A+ +   + R G  P+  T+N++     +LGD
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +  A R   +M +  C+P+  TY ILM      ++  MV +   EM    ++P+   Y  
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            I+    +G  + A++    MI  + +   +  Y + L  L ++G L+    L  KMV  
Sbjct: 483 RISAELILGSTSEAFQLTEVMI-SRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSD 541

Query: 528 GF 529
           G 
Sbjct: 542 GL 543



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 53/148 (35%), Gaps = 34/148 (22%)

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +     M   G  P     N++ R +      +    +Y +M  L  EP+ VTYN L+  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           F      D   KL +EM   E  P                                CL P
Sbjct: 241 FFREGRVDQAAKLLREM---EARPG------------------------------GCL-P 266

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               Y +V+  L R G+L+K  +LV++M
Sbjct: 267 SDVTYNVVINGLARKGELEKAAQLVDRM 294


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 193/407 (47%), Gaps = 25/407 (6%)

Query: 149 DLYHEMINLA-------------GKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVR-- 191
           DL+ EMI L              G  R+  F+     ++ M   +++  V TF IL+   
Sbjct: 291 DLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHM 350

Query: 192 -RYVRAGLAAEAVHAFNRMEEYG-----CAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
            ++ R   A E +   +  +E G       PD + ++ +I  LC+  R  E     + ++
Sbjct: 351 CKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMR 410

Query: 246 DK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +    PD I Y  L+ G+C+AG I + + +F EM   G+ PNV T + ++  +CR G++
Sbjct: 411 SQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRV 470

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A + F E    G + +++T+  L+      +  EK ++++N+M + GC  D I Y  L
Sbjct: 471 SSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTL 530

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I    + G++ DA  VL  + + G  P+   +N +     +    +    M  +M++   
Sbjct: 531 ISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGL 590

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +P+T+TYN L+   + +       K+ ++M +  V P V TY  +I  YC  G+ N A +
Sbjct: 591 KPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAME 650

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             ++M     + P + +Y +++  L +  +++    L+E M   G T
Sbjct: 651 IFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVT 697



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 176/404 (43%), Gaps = 17/404 (4%)

Query: 91  IPSLSLGFSQISTAHSISPSTVRH--VIEKSCGV---RHGIPLLQVLSFFNWVTARPEFV 145
           +  +S G      + S+ P  V +  +I+  C V   + G+ L++ +        R +  
Sbjct: 363 LEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERM--------RSQKG 414

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            +PD   Y+ +I+   K  + +      D M    V   V T + LV    R G  + AV
Sbjct: 415 CAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAV 474

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
           + F   +  G   D + ++ +I+  C      +A   F+  LK    PD IVY  L+ G+
Sbjct: 475 NFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGF 534

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            +AG +++A  V  E+K  GI+P+   Y+ +I   CR  +  R  ++  EM E G +P++
Sbjct: 535 SQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDT 594

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+N L+    K    +   +V  +M + G      TY  +I+ +C +G   +A+++   
Sbjct: 595 ITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKD 654

Query: 383 M-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
           M       PN   +N++   + K   V  A  +   MK     PNT TYN + +     K
Sbjct: 655 MKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEK 714

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
             + V +    M E+   P+  T  IL      +G      K++
Sbjct: 715 DLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFV 758



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 165/398 (41%), Gaps = 64/398 (16%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           K  N+ +TV+  S L+R   R+ L  E++  FN ++      +    ++ +SIL R  R 
Sbjct: 149 KELNIPLTVNAASFLLRASGRSELVEESLILFNDLDP--SVKNTYLRNVWLSILLRSGRV 206

Query: 235 SEAQSFFDSLKDKFEPDV------------IVYTNLVRGWCRAGNISEAERVFREMKMA- 281
            +A    D +   FE +             I+++ L++       +SE E V   +K   
Sbjct: 207 KDALKVIDEM---FESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGE 263

Query: 282 -GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC---------------------- 318
            G+  + +    +I  LCR  +  R  D+F EM+++G                       
Sbjct: 264 HGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNR 323

Query: 319 -------------EPNSITFNNLMRVHVKASRTEKVLQVYNQMK--------RLGCEADT 357
                        +PN +TF  L+    K  R +  L+V  +M          +  E D 
Sbjct: 324 MNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDV 383

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           + YN LID  CK G+ ++ + ++  M  +KGC P+  T+N +     K G++     ++ 
Sbjct: 384 VIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFD 443

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M      PN VT N L+     +      +    E +   ++ +  TY  LI  +C + 
Sbjct: 444 EMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVN 503

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           ++  A +   EM++  C  P + VY  ++    +AG++
Sbjct: 504 NFEKAMELFNEMLKSGC-SPDAIVYYTLISGFSQAGRM 540


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 189/384 (49%), Gaps = 6/384 (1%)

Query: 149 DLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           D+ H ++ + G  R+ DL  A   ++ M+    + +  T++ L+   +  G   +A    
Sbjct: 274 DVTHNVV-ITGLARKGDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQ 331

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
             ME  G  P  + ++ +I  L +  +   AQ  F  ++    +PDVI Y +L+ G+C+A
Sbjct: 332 LEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKA 391

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G++ EA  +F +++ AG+ P V TY+I+ID  CR G +  A  +  EM+E GC P+  T+
Sbjct: 392 GSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTY 451

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             LM+    A       + +++M   G + D   YN  I      G +  A ++   M+ 
Sbjct: 452 TILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMML 511

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G + +  T+N++   + K G++N A  +  KM     +P+ +TY  L+           
Sbjct: 512 EGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLRE 571

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             K  K+M  + + P+  TY + I  YC  G+  +AY + R+M+EE  ++P    Y +++
Sbjct: 572 ARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG-VEPNEITYNVLI 630

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L R G+ Q       +M++RG 
Sbjct: 631 HALCRTGRTQLAYRHFHEMLERGL 654



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 156/351 (44%), Gaps = 36/351 (10%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M++  +  TV T++ ++   +++G    A   F  M   G  PD I ++ +++  C+   
Sbjct: 334 MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   F  L+     P V+ Y  L+ G+CR G++ EA R+  EM   G  P+V TY+I
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++        +  A + F EML  G +P+   +N  +R  +      K  ++   M   G
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513

Query: 353 CEADTITYNFLID-----------------------------------CHCKDGKLEDAI 377
             +DT+TYN LID                                    HC+ G L +A 
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K    M+  G  P+A T+ +      + G++  A+  + KM +   EPN +TYN+L+   
Sbjct: 574 KFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             +  T +  +   EM E  + PN  TY +LI   C  G+W +A ++  EM
Sbjct: 634 CRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEM 684



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 178/392 (45%), Gaps = 38/392 (9%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE--YGCAPDKIAFSIVISILCRK 231
           M    +E ++ T++ L+  +++ G   +       ME    GC P+ +  ++VI+ L RK
Sbjct: 228 MLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARK 287

Query: 232 RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
               EA    + ++   +     Y  L+ G    G + +A+ +  EM+  GI P V TY+
Sbjct: 288 GDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYN 347

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I  L + GQ+  A   F EM  +G +P+ IT+N+L+  + KA   ++ L ++  ++  
Sbjct: 348 AMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHA 407

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR----------- 400
           G     +TYN LID +C+ G LE+A ++   MV +GC P+  T+ ++ +           
Sbjct: 408 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMA 467

Query: 401 ---------------CIS---------KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
                          C +          LG +  A R+   M       +TVTYNIL+  
Sbjct: 468 REFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDG 527

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
              + + +    L+ +M  N ++P+  TY  LI  +C  G    A K+ ++MI +  L P
Sbjct: 528 LCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDG-LAP 586

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +  Y + +    R G L        KM++ G
Sbjct: 587 SAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 160/345 (46%), Gaps = 4/345 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ ++N   K      A      ++   +  TV T++IL+  Y R G   EA   
Sbjct: 376 PDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRL 435

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              M E GC PD   ++I++         + A+ FFD +  K  +PD   Y   +R    
Sbjct: 436 KEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELT 495

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G I++A R+   M + GI  +  TY+I+ID LC+ G +  A D+  +M+  G +P+ IT
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT 555

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  H +     +  + +  M   G     +TY   I  +C+ G L  A      M+
Sbjct: 556 YTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKML 615

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  PN  T+N++   + + G    A+R + +M +    PN  TY +L+       + +
Sbjct: 616 EEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWE 675

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
             ++   EM +N + P+  T++ L   +   GH N+A +Y+   +
Sbjct: 676 DAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLENAV 719



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 4/293 (1%)

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           +F +       PDV     ++R    A    +   V  EM   GI+P++ TY+ ++D+  
Sbjct: 189 AFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFL 248

Query: 299 RCGQITRAHDVFAEM--LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           + G+  +   +  EM     GC PN +T N ++    +    E+  ++   M RL  +A 
Sbjct: 249 KEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKAS 307

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           + TYN LI      G ++ A  +   M  +G  P   T+N +   + + G V  A   + 
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M+ +  +P+ +TYN L+  +  + S    L L  ++    + P V TY ILI  YC +G
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               A +   EM+E+ CL P    Y ++++    A  L    E  ++M+ +G 
Sbjct: 428 DLEEARRLKEEMVEQGCL-PDVCTYTILMKGSHNACSLAMAREFFDEMLSKGL 479



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 4/155 (2%)

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +   + M   G  P+    N + R +S     +    ++ +M  L  EP+ VTYN L+  
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 437 FATSKSTDMVLKLKKEMEE--NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           F      D V  L KEME   +   PN  T+ ++IT     G    A + +  M   K  
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-- 304

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           K  S  Y  ++  L   G ++K ++L  +M + G 
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGI 339


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 180/381 (47%), Gaps = 3/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ ++N   +          +D M  +  E+ V T++ L+    + G   EAV   + M 
Sbjct: 305 FNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMV 364

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
              C P+ + ++ +I  LC++     A      L  K   PDV  + +L++G C   N  
Sbjct: 365 SRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNRE 424

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F EMK  G  P+ +TYSI+I++LC   ++  A  +  EM   GC  N + +N L+
Sbjct: 425 IAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLI 484

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K +R      +++QM+ LG    ++TYN LI+  CK  ++E+A ++++ M+ +G  
Sbjct: 485 DGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLK 544

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  + +   + GD+  A  +   M    CEP+ VTY  L+     +   D+  KL
Sbjct: 545 PDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKL 604

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL- 508
            + ++   +      Y  +I   C       A +  REM+ EK   P    Y++V + L 
Sbjct: 605 LRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMM-EKGDPPDVITYKIVFRGLC 663

Query: 509 RRAGQLQKHEELVEKMVDRGF 529
              G +Q+  +   +M+++G 
Sbjct: 664 NGGGPIQEAVDFTVEMLEKGI 684



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 185/395 (46%), Gaps = 6/395 (1%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           P +   PD       + G + + D+  A    +LM     E+T  + ++LV    + G  
Sbjct: 226 PNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRI 285

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
            EA+      EE G  PD++ F+ +++ LCR     +     D + +K FE DV  Y +L
Sbjct: 286 EEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSL 343

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G C+ G I EA  +   M     +PN  TY+ +I  LC+   +  A ++   +   G 
Sbjct: 344 ISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+  TFN+L++     S  E  ++++ +MK  GC+ D  TY+ LI+  C + +L++A+ 
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           +L  M   GC  N   +N +   + K   V  A  ++ +M+ L    ++VTYN L+    
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
            SK  +   +L  +M    ++P+  TY  ++  +C  G    A   ++ M    C +P  
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGC-EPDI 582

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
             Y  ++  L +AG++    +L+  +  +G    P
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTP 617



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 189/397 (47%), Gaps = 8/397 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           LS F W +A+P +   P ++HE++    +   FD     +  M S  + +   TF I + 
Sbjct: 76  LSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLE 135

Query: 192 RYVRA-GLAAEAVHAFNRME-EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
            Y  +  L AE    F  ME ++   PD   +++ +S+L +  +    ++    +  D  
Sbjct: 136 TYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAV 195

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDV  +  L+R  C+A  +  A  +  +M   G++P+  T++ ++        +  A  
Sbjct: 196 PPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALR 255

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMKRLGCEADTITYNFLIDCH 367
           +   M+E GCE  S++ N L+    K  R E+ L+ +Y +    G   D +T+N L++  
Sbjct: 256 IKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEE---GFCPDQVTFNALVNGL 312

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C+ G ++  +++++ M+ KG   +  T+N +   + KLG+++ A  +   M    CEPNT
Sbjct: 313 CRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNT 372

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VTYN L+         +   +L + +    V P+V T+  LI   C   +   A +   E
Sbjct: 373 VTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEE 432

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           M E+ C  P    Y ++++ L    +L++   L+++M
Sbjct: 433 MKEKGC-DPDEFTYSILIESLCSERRLKEALMLLKEM 468


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 171/352 (48%), Gaps = 3/352 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F  +MK R V   + TF+I ++   R G   EA      +   G  PD I+++ +I   C
Sbjct: 239 FSKVMK-RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFC 297

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  +  EA+ +   + +   EP+   Y  ++ G+C+AG +  A+++ R+    G  P+ +
Sbjct: 298 KHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TYS +I+ LC  G + RA  VF E +E G + + I +N L++   K     + LQ+   M
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              GC  D  TYN +++  CK G L DA  +LN  + KGC P+  TFN +     K  ++
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +   M      P+ +TYN L+     ++  D V+   K M E    PN+ TY IL
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           I  +C     + A +  +EM + + L P       ++  L   G+L K  EL
Sbjct: 538 IESFCKDRKVSEAMELFKEM-KTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 199/423 (47%), Gaps = 40/423 (9%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +I    K  +   A  ++  M +  VE    T++ ++  + +AG+   A  
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWC 263
                   G  PD+  +S +I+ LC     + A + F+++++  F+  +I+Y  LV+G  
Sbjct: 343 ILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLS 402

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G + +A ++ ++M   G  P+++TY++V++ LC+ G ++ A+ +  + +  GC P+  
Sbjct: 403 KQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+  + K    +K +++ + M   G   D ITYN L++  CK  KL++ +    +M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT-------------- 429
           + KGC PN  T+N++     K   V+ A  ++ +MK     P+ VT              
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582

Query: 430 ----------------------YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
                                 +NI++  F    +  M  KL  +M  ++  P+  TYR+
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I  YC  G+ + A+ ++ E I  K L P  +    VL  L    +L +   ++  MV  
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENI-SKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 528 GFT 530
           G  
Sbjct: 702 GIV 704



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 187/381 (49%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N+  +   F  A      MK   +   V T +I ++ +   G    A+   N M 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP 173

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
             GC  + +++  VIS   ++    EA   FD  LK    PD++ +  L+   C+ GN+ 
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E+E++F ++   G+ PN++T++I I  LCR G I  A  +   ++  G  P+ I++N L+
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K S+  +     ++M   G E +  TYN +I+  CK G +++A K+L   + KG  
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI 353

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++ +   +   GD+N A  ++ +  +   + + + YN L++  +        L+L
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            K+M E+   P++ TY +++   C MG  ++A   + + I + C+ P    +  ++    
Sbjct: 414 MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI-PDIFTFNTLIDGYC 472

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           +   + K  E+++ M+  G T
Sbjct: 473 KQRNMDKAIEILDTMLSHGIT 493



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 191/409 (46%), Gaps = 3/409 (0%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI-DLMKSRNVE 180
           +R+    L  L  FN V     F H+ + Y  MI   G   +F+     + ++ K+ + +
Sbjct: 14  IRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSK 73

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
           +    +  ++R Y R G   EAV+ F RM+ Y C P   +++ +++IL      S+A   
Sbjct: 74  MLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKV 133

Query: 241 FDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           +  +KD    PDV  +T  ++ +C  G  + A R+   M   G + N  +Y  VI    +
Sbjct: 134 YMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK 193

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
                 A+ +F EML+ G  P+ +TFN L+ V  K    ++  ++++++ + G   +  T
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +N  I   C+ G +++A ++L S+V +G  P+  ++N +     K   +  A     KM 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +   EPN  TYN ++  F  +       K+ ++       P+  TY  LI   C  G  N
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            A     E + EK  K    +Y  +++ L + G + +  +L++ M++ G
Sbjct: 374 RAMAVFYEAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 1/276 (0%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           VY  ++R + R G + EA  VF  M     +P+V +Y+ +++ L   G  ++AH V+  M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            ++G  P+  T    M+      R    L++ N M   GCE + ++Y  +I    K+   
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A  + + M+++G  P+  TFN +   + K G+V  + +++ K+      PN  T+NI 
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +Q      + D   +L + +    + P+V +Y  LI  +C       A  Y+ +M+    
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG- 316

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++P    Y  ++    +AG +Q  ++++   + +GF
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF 352



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 4/247 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++  + +I+   K R  D A   +D M S  +   V T++ L+    +A      V  
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M E GC P+ I ++I+I   C+ R+ SEA   F  +K +   PD++    L+ G C 
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 265 AGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            G + +A  +F  + K      +   ++I+I+A C    ++ A  +F +M    C P++ 
Sbjct: 579 NGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNY 638

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  ++  + K    +       +    G      T   +++C C   +L +A+ ++N M
Sbjct: 639 TYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLM 698

Query: 384 VRKGCNP 390
           V+ G  P
Sbjct: 699 VQNGIVP 705


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 202/430 (46%), Gaps = 11/430 (2%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQ----VLSFFNWVTARPEF--VHSPDLYHEMINLAG 159
           S+S  T   +     G+  G+   +     +S F+WV  R +F  V +  +   +I + G
Sbjct: 134 SLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLG 193

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  +   A   ++ ++    ++ V  ++ L+  Y   G   +AV  F +MEE GC P  I
Sbjct: 194 KEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLI 253

Query: 220 AFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI-SEAERVFR 276
            +++++++  +     S+       +K     PD   Y  L+   CR G++  EA +VF 
Sbjct: 254 TYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLI-SCCRRGSLYEEAAQVFE 312

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EMK++G  P+  T++ ++D   +  +   A +V  EM   G  P+ +T+N+L+  + +  
Sbjct: 313 EMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDG 372

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
              + +++ +QM   G + D  TY  L+    K G  E A+++   M   GC PN  TFN
Sbjct: 373 LLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFN 432

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            + +     G      +++ +++   C P+ VT+N L+ +F  +     V  + KEM+  
Sbjct: 433 ALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 492

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
              P  +T+  LI+ Y   G +  A    + M+E   + P  S Y  VL  L R G  ++
Sbjct: 493 GFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAG-VTPDLSSYNAVLAALARGGLWEQ 551

Query: 517 HEELVEKMVD 526
            E++  +M D
Sbjct: 552 SEKVFAEMKD 561



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 158/328 (48%), Gaps = 8/328 (2%)

Query: 151 YHEMINLAGKVRQFDLAWH----FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           Y+ ++N+ GK+    + W      +  MKS  V     T++ L+    R  L  EA   F
Sbjct: 255 YNVILNVYGKM---GMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVF 311

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRA 265
             M+  G +PDK+ F+ ++ +  + RR  EA      ++   F P ++ Y +L+  + R 
Sbjct: 312 EEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARD 371

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + EA  +  +M   GI+P+V+TY+ ++    + G    A  +F EM   GC+PN  TF
Sbjct: 372 GLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTF 431

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+++H    R  ++++V+ +++   C  D +T+N L+    ++G   +   V   M R
Sbjct: 432 NALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 491

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G  P   TFN +    S+ G    A  +Y +M +    P+  +YN ++   A     + 
Sbjct: 492 AGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQ 551

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYC 473
             K+  EM++   +PN  TY  L+  Y 
Sbjct: 552 SEKVFAEMKDGRCKPNELTYCSLLHAYA 579



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 178/423 (42%), Gaps = 44/423 (10%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD   Y+ +I+   +   ++ A    + MK         TF+ L+  Y ++    EA+ 
Sbjct: 285 APDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAME 344

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               ME  G +P  + ++ +IS   R     EA    D + +K  +PDV  YT L+ G+ 
Sbjct: 345 VLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFE 404

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG    A R+F EM+ AG +PN+ T++ +I      G+      VF E+    C P+ +
Sbjct: 405 KAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIV 464

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+ V  +     +V  V+ +MKR G   +  T+N LI  + + G  + A+ V   M
Sbjct: 465 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM 524

Query: 384 VRKG-----------------------------------CNPNASTFNMIFRCISKLGDV 408
           +  G                                   C PN  T+  +    +   ++
Sbjct: 525 LEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEI 584

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE--NEVEPNVNTYR 466
              H +  ++     EP  V   +L  +   +   D++++ +   EE   +  P+++T  
Sbjct: 585 ERMHTLAEEIYSGLTEPVPV---LLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLN 641

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I +Y G          I   + E    P  + Y  ++    R+   ++ EE++++++ 
Sbjct: 642 AMIAIY-GRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILA 700

Query: 527 RGF 529
           +G 
Sbjct: 701 KGL 703



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/384 (20%), Positives = 169/384 (44%), Gaps = 39/384 (10%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++     L+G  K    + A      M++   +  + TF+ L++ +   G  AE +  
Sbjct: 391 PDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKV 450

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  +E   CAPD + ++ ++++  +    SE    F  +K   F P+   +  L+  + R
Sbjct: 451 FEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSR 510

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G+  +A  V++ M  AG+ P++ +Y+ V+ AL R G   ++  VFAEM +  C+PN +T
Sbjct: 511 CGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELT 570

Query: 325 FNNLMRVHVKASRTEKVLQV-----------------------------------YNQMK 349
           + +L+  +  +   E++  +                                   + ++K
Sbjct: 571 YCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELK 630

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G   D  T N +I  + +   +  A ++LN M   G +P+ +T+N +    S+  +  
Sbjct: 631 KKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFE 689

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            +  +  ++     +P+ ++YN ++  +  +       ++   M+   + P+V TY   +
Sbjct: 690 RSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFV 749

Query: 470 TMYCGMGHWNNAYKYIREMIEEKC 493
             Y     + +A   +R MI+  C
Sbjct: 750 ASYAADSLFEDAIGVVRYMIKHGC 773



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 137/306 (44%), Gaps = 2/306 (0%)

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           DTF+ L+  Y R G   +A+  + RM E G  PD  +++ V++ L R     +++  F  
Sbjct: 499 DTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAE 558

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +KD + +P+ + Y +L+  +  +  I     +  E+     +P       ++    +C  
Sbjct: 559 MKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDL 618

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +      F E+ + G  P+  T N ++ ++ +     K  ++ N M   G      TYN 
Sbjct: 619 LMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNS 677

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  H +    E + +VL  ++ KG  P+  ++N +     + G +  A R++  MK   
Sbjct: 678 LMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYG 737

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN  +  +A     +  + + + M ++  + N NTY  ++  YC      +A 
Sbjct: 738 LVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAI 797

Query: 483 KYIREM 488
            ++  +
Sbjct: 798 MFVSSL 803



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 122/293 (41%), Gaps = 35/293 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV   D ++ +I+   +   F  A      M    V   + +++ ++    R GL  
Sbjct: 491 RAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWE 550

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS------------------------- 235
           ++   F  M++  C P+++ +  ++      +                            
Sbjct: 551 QSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLV 610

Query: 236 ----------EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
                     E +  F+ LK K  PD+     ++  + R   +++A  +   M  +G  P
Sbjct: 611 LVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSP 670

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           ++ TY+ ++    R     R+ +V  E+L  G +P+ I++N ++  + +  R +   +++
Sbjct: 671 SLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIF 730

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           + MK  G   D ITYN  +  +  D   EDAI V+  M++ GC  N +T+N I
Sbjct: 731 SYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSI 783



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           + T + ++  Y R  + A+A    N M E G +P    ++ ++ +  R      ++    
Sbjct: 637 LSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLK 696

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +  K  +PD+I Y  ++  +CR G + +A R+F  MK  G+ P+V TY+  + +     
Sbjct: 697 EILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADS 756

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
               A  V   M++ GC+ N  T+N+++  + K SR    +   + + +L
Sbjct: 757 LFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQL 806


>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 183/377 (48%), Gaps = 8/377 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKS-RN--VEITVDTFSI 188
            +FF W   +P + HS   YH MI++ GK+R+FD AW+ I+ M+  RN    +T  T  I
Sbjct: 176 FTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLI 235

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R+Y      A A++ F   + +        F  ++S LCR +   +A+      KD F
Sbjct: 236 MIRKYCAVHDVARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVF 295

Query: 249 EPDVIVYTNLVRGWCR-AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             D   +  ++ GWC    + S AER++ EM    IQ +V +Y  +I    +  ++ +  
Sbjct: 296 PLDTKSFNIILNGWCNLIVSTSHAERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKVL 355

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +F EM +    P+   +N ++    K    ++ + +   M+      D +TYN LI   
Sbjct: 356 RMFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPL 415

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK  K+++A ++ + M+++  +P   TF+  FR +    +V     +  KMK+L+C P  
Sbjct: 416 CKAHKVDEAKQLFDEMLKRHLSPTIQTFHAFFRILRTKEEV---FELLDKMKELRCYPTI 472

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TY +L++ F      D V K+   M E+E+  + ++Y +LI      G    A +Y  E
Sbjct: 473 ETYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAE 532

Query: 488 MIEEKCLKPGSSVYEMV 504
           M +EK   P     EM+
Sbjct: 533 M-QEKGFLPEPKTEEML 548



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 158/363 (43%), Gaps = 30/363 (8%)

Query: 107 ISPSTVRHVIEKSCGVR---HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ 163
           ++P T+  +I K C V      I        FN+     EF       H +++   + + 
Sbjct: 228 VTPQTLLIMIRKYCAVHDVARAINTFYAYKRFNFRVGLEEF-------HSLLSALCRYKN 280

Query: 164 FDLAWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHA---FNRMEEYGCAPDKI 219
              A +   L  +++V  +   +F+I++  +    L     HA   ++ M +     D +
Sbjct: 281 VQDAEYL--LFCNKDVFPLDTKSFNIILNGW--CNLIVSTSHAERIWHEMIKRRIQHDVV 336

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           ++  +IS   +  +  +    FD +K  K  PD  VY  ++    +   + EA  +   M
Sbjct: 337 SYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTM 396

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +   + P+V TY+ +I  LC+  ++  A  +F EML+    P   TF+   R+       
Sbjct: 397 EGNDVTPDVVTYNSLIKPLCKAHKVDEAKQLFDEMLKRHLSPTIQTFHAFFRI---LRTK 453

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           E+V ++ ++MK L C     TY  LI   C+  +L+D  K+ ++M     + + S++ ++
Sbjct: 454 EEVFELLDKMKELRCYPTIETYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVL 513

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              +   G +  A R Y +M++    P   T  +L    +  ++T        E +E ++
Sbjct: 514 IHGLFLNGKLEEAQRYYAEMQEKGFLPEPKTEEMLQAWVSGKQAT--------EGQEKDL 565

Query: 459 EPN 461
           EP+
Sbjct: 566 EPS 568


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 207/480 (43%), Gaps = 63/480 (13%)

Query: 104 AHSISPSTVRHVIEKSCGVRHGIP------LLQVLSFFNWVTARPEFVH--------SPD 149
           +H+ +P+++  +   S   RH IP      L ++L+ F+       F+         +PD
Sbjct: 73  SHAFTPASLATL--HSLAARHCIPPPSASLLSKLLARFSSPADAASFLRDSLAAGAPAPD 130

Query: 150 L--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           +  ++ +++  G+             M+  +V+  + T+ IL+ R  +AGL  +A+   +
Sbjct: 131 VSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLD 190

Query: 208 RMEEYG---CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLVRG 261
           RM   G   CA D +  + V+  LC+  R  +A  F D    +     P+ + Y  L   
Sbjct: 191 RMSSPGSDVCA-DIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADA 249

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD------------- 308
            CR G+I  A ++   M+  G+ PNV T + ++  LCR G++  A D             
Sbjct: 250 CCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEAR 309

Query: 309 ------------------------VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                                   +F EM + G  P+++ +  ++    +A R      +
Sbjct: 310 GNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNI 369

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
              MK+ G + D   YN LI   C+  +L +A ++   M   G  P+  T+N +  C+ K
Sbjct: 370 AASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCK 429

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            GD +    + G M D  C+P+ VT+  L+  +  +  TD  LK+ + M E  ++PN   
Sbjct: 430 AGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVI 489

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI   C     + A K   EM E   +    + Y  +L+ L+     +K  EL+++M
Sbjct: 490 YNTLIDFLCKSREVDVAIKLFDEMRENN-VPANVTTYNALLKGLQDKNMPEKAFELMDQM 548



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 4/347 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L     R G    A     RME+ G  P+ I  + ++  LCR  R   A  FF   
Sbjct: 242 TYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREK 301

Query: 245 KDKF---EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +  +     + + Y+ LV  +    N++ A  +F EM   G  P+   Y  +I  L + G
Sbjct: 302 RTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAG 361

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A ++ A M + G + +   +N L+    +  R  +  Q++ +MK  G + D  TYN
Sbjct: 362 RLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYN 421

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+ C CK G      ++L +M+  GC P+  TF  +     K G  + A +++  M + 
Sbjct: 422 TLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEA 481

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           + +PNTV YN L+     S+  D+ +KL  EM EN V  NV TY  L+           A
Sbjct: 482 RIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKA 541

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ + +M EE+C  P     +++++ L   G+ ++ +  +E+  ++G
Sbjct: 542 FELMDQMKEERC-TPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKG 587



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 3/161 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y  + +++   K   F      +  M     + +V TF  LV  Y +AG   EA+  
Sbjct: 415 PDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKI 474

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCR 264
           F  M E    P+ + ++ +I  LC+ R    A   FD +++   P +V  Y  L++G   
Sbjct: 475 FRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQD 534

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
                +A  +  +MK     P+  T  ++++ L   G+  R
Sbjct: 535 KNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETER 575


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 3/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T +  VRR   AG    A+    R  + G  A D  A + +++  C+    +EA+  FD 
Sbjct: 4   TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +      P+ + YT L+ G+   G   +   +F EM+  G++PN+YTY+ +I   CR G+
Sbjct: 64  MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGE 123

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
             RA  +F EM   G   N +++N L+    +  +     ++ + M+  G     IT+N 
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNL 183

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+D + K GK+ +A+   N M   G  P+A T+NM+     +  D+  A+R    MK+  
Sbjct: 184 LVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            EP  VTY IL+  FA         ++   ME+  +E + +TY +L+   C  G+  +A 
Sbjct: 244 LEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDAR 303

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           K  + M  EK ++P + +Y+M++    R G   K  +L+ +M  +G 
Sbjct: 304 KLFQSM-GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGL 349



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 166/351 (47%), Gaps = 2/351 (0%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           KS +  + V   + LV    + G  AEA   F+ M   G AP+++ ++ ++       + 
Sbjct: 30  KSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQR 89

Query: 235 SEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            +  + F+ ++    EP++  Y  L+  WCR G    A  +F EM + GI  NV +Y+ +
Sbjct: 90  EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTL 149

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  LCR G++  A  +   M   G  P+ ITFN L+  + KA +    L  +NQMK  G 
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           +   +TYN LI   C+   +  A + L+ M  +G  P   T+ ++    ++   +  A  
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M+    E +  TY +L++      +     KL + M E  VEP+   Y ++I  Y 
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             G    A K I EM  +K L P S+ Y + ++ L +  + Q+ E L++ M
Sbjct: 330 REGSSYKALKLIMEM-RQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 143/293 (48%), Gaps = 1/293 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q +  +   + M+   VE  + T++ L+  + R G    A   F+ M   G   + ++++
Sbjct: 88  QREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYN 147

Query: 223 IVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I+ LCR  +  +A    D ++ +   P +I +  LV G+ +AG +S A   F +MK A
Sbjct: 148 TLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAA 207

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G QP+  TY+++I   CR   +TRA+   ++M E G EP  +T+  L+    + +   K 
Sbjct: 208 GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA 267

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            ++   M++ G E D  TY  L+   C +G ++DA K+  SM  KG  P+   ++M+   
Sbjct: 268 FEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYG 327

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
             + G    A ++  +M+     PN+ +Y + +++            L  +ME
Sbjct: 328 YGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 130/260 (50%), Gaps = 3/260 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+LY  + +I    +  +F+ A    D M  R +   V +++ L+    R G   +A   
Sbjct: 106 PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL 165

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P  I F++++    +  + S A  FF+ +K   F+P  + Y  L+ G+CR
Sbjct: 166 LDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCR 225

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           A +++ A R   +MK  G++P   TY+I+ID+  R   + +A ++ A M + G E ++ T
Sbjct: 226 ARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHT 285

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+R        +   +++  M   G E   + Y+ +I  + ++G    A+K++  M 
Sbjct: 286 YGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMR 345

Query: 385 RKGCNPNASTFNMIFRCISK 404
           +KG  PN++++ +  R + K
Sbjct: 346 QKGLIPNSASYGLTIRVLCK 365



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 2/184 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FFN + A   F  S   Y+ +I    + R    A   +  MK R +E T  T++IL+
Sbjct: 197 ALPFFNQMKA-AGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FE 249
             + R     +A      ME+ G   D   + +++  LC +    +A+  F S+ +K  E
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P  ++Y  ++ G+ R G+  +A ++  EM+  G+ PN  +Y + I  LC+  +   A  +
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEAL 375

Query: 310 FAEM 313
             +M
Sbjct: 376 LDDM 379


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 186/375 (49%), Gaps = 4/375 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++N   K R  D+ W     M    VE  +  +++L+    ++G   +A +  + ME   
Sbjct: 171 LLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKC 230

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             PD   ++ +IS+ C+K    EA S  D + ++  +PD++ Y +L+ G+C+ G + EA 
Sbjct: 231 VFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAM 290

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R+F+E++ A   PN  TY+ +ID  CR   + +A  +  EM   G  P  +T+N+++R  
Sbjct: 291 RLFKEIRDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKL 348

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +  R     ++ N+M     E D +T N LI+ +CK G ++ A+KV N MV  G   + 
Sbjct: 349 CEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQ 408

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+  +     K+ +++GA  +   M D    P+  TY+ L+  +   ++ + VLKL  E
Sbjct: 409 FTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDE 468

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
                +  + + YR LI  +C     + A K I  +++EK     S +Y  +     + G
Sbjct: 469 FVRKGLCVDKSLYRALIRRFCKREQVDYA-KKIFSLMQEKGTLGDSVIYTSLAYAYWKLG 527

Query: 513 QLQKHEELVEKMVDR 527
           +     +L+++M  R
Sbjct: 528 KANAASDLLDEMYKR 542



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 184/399 (46%), Gaps = 21/399 (5%)

Query: 133 SFFNWV-TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           + F W+ ++ P + HS      MI++  K +    A   ++ +  R+   T    S LVR
Sbjct: 62  ALFKWIESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVR 121

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
            +    + +   H F+ +              VI     K +    Q F   + + F P 
Sbjct: 122 LHDDPDINS---HVFSWL--------------VIVYANTKMKQEAIQVFEHMMVNGFRPH 164

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           +   T L+    +        +V+++M   G++ N++ Y+++I A C+ G + +A ++ +
Sbjct: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLS 224

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM      P+  T+N L+ ++ K     + L V ++M+R G + D +TYN LI   CK+G
Sbjct: 225 EMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEG 284

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           ++ +A+++   +  +   PN  T+  +     +L D++ A R+  +M+     P  VTYN
Sbjct: 285 RMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYN 342

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            +++            KL  EM E ++EP+  T   LI  YC +G   +A K    M+E 
Sbjct: 343 SILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEA 402

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             LK     Y+ ++    +  ++   +EL+  M+D GF+
Sbjct: 403 G-LKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFS 440



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 163/360 (45%), Gaps = 36/360 (10%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+   K    + A + +  M+S+ V   + T++ L+  Y + G+  EA+   +RM
Sbjct: 202 VYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRM 261

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E  G  PD + ++ +I   C++ R  EA   F  ++D   P+ + YT L+ G+CR  ++ 
Sbjct: 262 EREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA-TPNHVTYTTLIDGYCRLNDLD 320

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+  EM+  G+ P V TY+ ++  LC  G+I  A+ +  EM E   EP+++T N L+
Sbjct: 321 QALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLI 380

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITY----------------------------- 360
             + K    +  L+V N+M   G + D  TY                             
Sbjct: 381 NAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFS 440

Query: 361 ------NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                 ++L+D +C     E  +K+ +  VRKG   + S +  + R   K   V+ A ++
Sbjct: 441 PSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKI 500

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  M++     ++V Y  L   +      +    L  EM +  +   +  YR L   Y G
Sbjct: 501 FSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYAG 560


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 179/371 (48%), Gaps = 2/371 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  + D A   +D M    V +    ++ L+  YVR             ME  G      
Sbjct: 189 KSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVG 248

Query: 220 AFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++I++  L   R  S+ ++ F+ +K +    DV +YT ++  +CRAGN+  A +V  E 
Sbjct: 249 TYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDEC 308

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              G++PN  TY ++I+  C+ GQ+  A  + A+M   G   N I FN ++  + +    
Sbjct: 309 VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMV 368

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +  L++   M+++G E D  TYN L    C+  +L++A  +L+ M+  G  PN  T+  +
Sbjct: 369 DDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTL 428

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                K GD+  A R++ +M +    P+ VTYN+++  +    S     + +KEME+   
Sbjct: 429 ISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGF 488

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+V TY  L+  +C  G  + A K   EM +++  +P    Y  ++  L + G+ +   
Sbjct: 489 VPDVYTYASLVHGHCVNGKVDVALKLFEEM-KQRGTEPNVVAYTALISGLAKEGRSEAAF 547

Query: 519 ELVEKMVDRGF 529
           +L + M+  G 
Sbjct: 548 QLYDDMLKAGL 558



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 168/351 (47%), Gaps = 4/351 (1%)

Query: 161 VRQFD--LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           VRQ D       +++M++  +E TV T++ILV     A   ++    FN M+      D 
Sbjct: 223 VRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDV 282

Query: 219 IAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             ++ VI+  CR      A    D  + +  EP+   Y  L+ G+C+ G +  AE +  +
Sbjct: 283 YLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLAD 342

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+  G+  N   ++ +ID  CR G +  A  + A M ++G E +  T+N L     + +R
Sbjct: 343 MQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNR 402

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            ++   + + M  +G   + +TY  LI  HCKDG + +A ++   M  KG  P+  T+N+
Sbjct: 403 LDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNV 462

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +    +K G +  A R   +M+     P+  TY  L+     +   D+ LKL +EM++  
Sbjct: 463 MIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG 522

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            EPNV  Y  LI+     G    A++   +M++   L P  S+Y  ++  L
Sbjct: 523 TEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG-LIPDDSLYSALVGSL 572



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 2/317 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           +V + FN + A    V    LY  +IN   +      A   +D      VE    T+ +L
Sbjct: 265 KVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVL 323

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           +  + + G    A      M+  G   ++I F+ +I   CRK    +A     ++ K   
Sbjct: 324 INGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGV 383

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           E D+  Y  L  G CR   + EA+ +   M   G+ PN  TY+ +I   C+ G +  A  
Sbjct: 384 ELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARR 443

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F EM E G  P+ +T+N ++  + K     +  +   +M++ G   D  TY  L+  HC
Sbjct: 444 LFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHC 503

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            +GK++ A+K+   M ++G  PN   +  +   ++K G    A ++Y  M      P+  
Sbjct: 504 VNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDS 563

Query: 429 TYNILMQMFATSKSTDM 445
            Y+ L+    T    D+
Sbjct: 564 LYSALVGSLHTDNRKDV 580



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 36/307 (11%)

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           +V G C++G + +A R+  +M   G+  N   Y+ ++D   R     R  ++   M   G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
            E    T+  L+     A    KV  ++N+MK      D   Y  +I+ +C+ G +  A 
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           KVL+  V  G  PN  T+ ++     K+G +  A  +   M+      N + +N ++  +
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362

Query: 438 ATSKSTDMVLKLKKEMEENEVE-----------------------------------PNV 462
                 D  LK+K  ME+  VE                                   PN 
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 422

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  LI+++C  G    A +  REM  EK   P    Y +++    + G +++ E   +
Sbjct: 423 VTYTTLISIHCKDGDMVEARRLFREM-AEKGATPSVVTYNVMIDGYTKKGSIREAERFRK 481

Query: 523 KMVDRGF 529
           +M  +GF
Sbjct: 482 EMEKKGF 488


>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
          Length = 838

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 193/397 (48%), Gaps = 8/397 (2%)

Query: 136 NWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRR 192
            W+  R  F   PD+  Y+ +I+  G+   +  A   +++L+++R V  T DT+++L++ 
Sbjct: 86  GWILYRSSF--HPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVP-TEDTYALLLKA 142

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPD 251
           Y  +GL  +A   F  M +YG  P  + ++  I  L +     +A   F+ +K D+ +P 
Sbjct: 143 YCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPS 202

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              YT L+  + +A     A +VF EM+    +PN+ T++ +++A  R G   +A ++F 
Sbjct: 203 TATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFE 262

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           ++ E G EP+   +N LM  + +A       ++++ M+ +GCE D  +YN ++D + + G
Sbjct: 263 QLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 322

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
             EDA  V   M R G  P   +  ++    S+ G V     +  +M     +P+T   N
Sbjct: 323 LHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLN 382

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            ++ ++      + + ++   ME+     +++TY ILI +Y   G +    +  R +   
Sbjct: 383 SMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSL-PA 441

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + L P    +   +    R  Q  +  E+ E+M+D G
Sbjct: 442 RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAG 478



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 141/288 (48%), Gaps = 2/288 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +INL GK  +  +A      M+S+  +  + TF+ LV  + R GL  +A   F +++
Sbjct: 206 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 265

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD  A++ ++    R      A   F  ++    EPD   Y  +V  + RAG   
Sbjct: 266 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 325

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A+ VF  MK  GI P + ++ +++ A  R G++ +  ++  +M + G +P++   N+++
Sbjct: 326 DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSML 385

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            ++ +  + EK+ +V   M++    AD  TYN LI+ + + G      ++  S+  +   
Sbjct: 386 NLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLI 445

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY-NILMQM 436
           P+  T+       S+    N    ++ +M D  C P+  T  N+L+++
Sbjct: 446 PDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKNVLLKV 493



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 411 AHRMYGKMKDLKCEPNTVTY----NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           ++R++G +  L   PN  T+    N+ +Q+    +   +VL     +  +   P+V  Y 
Sbjct: 45  SNRIWGSLDSLS--PNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 102

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +LI  Y     +  A     E++E +C+ P    Y ++L+    +G L+K E +  +M  
Sbjct: 103 LLIDAYGQKSLYKKAESTYLELLEARCV-PTEDTYALLLKAYCTSGLLEKAEAVFAEMRK 161

Query: 527 RGF 529
            GF
Sbjct: 162 YGF 164


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 178/365 (48%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M    V++    ++ L+  Y R             ME  G  P    ++I++ 
Sbjct: 162 ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L   R  ++ ++ F+ +K K    DV  Y++++  +CRAGN+  A  VF E    GI+P
Sbjct: 222 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 281

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N +TY  +I+  C+ GQ+  A  +  +M   G   N I FN ++  + + +  +K L++ 
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M+++G E D  TYN L     +  ++++A  +L  M+ KG  PN  ++  +       
Sbjct: 342 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNE 401

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A R++ +M     EP+ VTYN++M  +    S     + K EME+  + P++ +Y
Sbjct: 402 GDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSY 461

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+  +C  G  + A +   EM +++  KP    Y  ++  L + G+ ++  +L + M+
Sbjct: 462 AALVHGHCVNGKVDVALRLFEEM-KQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNML 520

Query: 526 DRGFT 530
             G T
Sbjct: 521 GDGLT 525



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 171/361 (47%), Gaps = 6/361 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   + +  D     + +M++  +E TV T++ILV     A    +    F  M+
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240

Query: 211 EYGCAPDKIAFSIVISILCRK---RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN 267
               + D   +S VI+  CR    RRASE   F + + +  EP+   Y  L+ G+C+ G 
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNVRRASEV--FDECVGNGIEPNEHTYGALINGFCKIGQ 298

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +  AE +  +M++ G+  N   ++ +ID  CR   + +A ++   M ++G E +  T+N 
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L     +A+R ++   +   M   G   + ++Y  LI  HC +G + +A ++   M   G
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T+N++     K G +  A R   +M+     P+  +Y  L+     +   D+ L
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L +EM++   +PN+  Y  LI+     G    A++    M+ +  L P  ++Y  ++  
Sbjct: 479 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG-LTPDDALYSALVGS 537

Query: 508 L 508
           L
Sbjct: 538 L 538



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 11/302 (3%)

Query: 150 LYHEMINL---AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
            Y  +IN    AG VR+   A    D      +E    T+  L+  + + G    A    
Sbjct: 250 FYSSVINAYCRAGNVRR---ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLV 306

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKR---RASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
             M+  G   ++I F+ +I   CRK    +A E +   + +    E DV  Y  L  G  
Sbjct: 307 TDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMG--IELDVYTYNTLACGLR 364

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RA  + EA+ + R M   G++PN  +Y+ +I   C  G +  A  +F EM   G EP+ +
Sbjct: 365 RANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLV 424

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N +M  ++K     +  +  N+M++ G   D  +Y  L+  HC +GK++ A+++   M
Sbjct: 425 TYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEM 484

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            ++G  PN   +  +   ++K G    A ++Y  M      P+   Y+ L+    T K  
Sbjct: 485 KQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQ 544

Query: 444 DM 445
           ++
Sbjct: 545 NV 546


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 187/377 (49%), Gaps = 5/377 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I LA K    + A +    M +  ++ ++ TF+ L+    + G   EA    +++ +Y 
Sbjct: 170 LIQLA-KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 228

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
            +PD   ++ +I   CR R    A   FD + K+  +P+ + Y+ L+ G C  G + EA 
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +  EM   GI+P VYTY++ I ALC       A ++ A M + GC PN  T+  L+   
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +  + E  + +Y++M + G   +T+TYN LI+  C  G+   A+K+ + M   G   N 
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N I + +   GD+  A  ++ KM  +   P  VTYN L+  + T  + +   +L   
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRA 511
           M+EN  EP+  TY  L++ +   G   +A  Y +EM+E  C L P    Y  ++    + 
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE--CGLNPNPVSYTALIDGHSKD 526

Query: 512 GQLQKHEELVEKMVDRG 528
           G++     L+++M + G
Sbjct: 527 GKVDIALSLLKRMEEMG 543



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 185/415 (44%), Gaps = 41/415 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      + D A   ++ M  + +E TV T+++ +          EA+    RM+
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 330

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC P+   ++ +IS L R  +   A   +   LK+   P+ + Y  L+   C  G  S
Sbjct: 331 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 390

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++F  M+  G   N  TY+ +I  LC  G I +A  +F +ML++G  P  +T+N L+
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYN---------------------------- 361
             ++         ++ + MK  GCE D  TYN                            
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510

Query: 362 -------FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
                   LID H KDGK++ A+ +L  M   GCNPN  ++N +   +SK    + A ++
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             KM +    PN +TY  L+     +  T    K+  +ME+ +  PN+ TY  LI   C 
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G  + A     E + E   +P    Y  ++  L R G+  + E+LV+ M +RGF
Sbjct: 631 EGKADEA-----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 680



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 181/424 (42%), Gaps = 66/424 (15%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK R     V T++ L+    R G    A+  +++M + G  P+ + ++ +I+ LC   R
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 234 ASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            S A   F  ++      +   Y  +++G C  G+I +A  +F +M   G  P V TY+ 
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I+     G +  A  +   M E GCEP+  T+N L+    K  + E     + +M   G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + ++Y  LID H KDGK++ A+ +L  M   GCNPN  ++N +   +SK    + A 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-------------- 458
           ++  KM +    PN +TY  L+     +  T    K+  +ME+ +               
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628

Query: 459 -----------------EPNVNTYRILITMYCGMGHWNNAYKYIREM------------- 488
                            EP ++TY  L++  C  G +  A + +++M             
Sbjct: 629 CQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 688

Query: 489 ---------------------IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
                                IE K  +   S+Y  ++  L +AGQ+++ + L + M+++
Sbjct: 689 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 748

Query: 528 GFTA 531
            + A
Sbjct: 749 EWNA 752



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 157/319 (49%), Gaps = 5/319 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+++   K  + + A  +   M    +     +++ L+  + + G    A+    RME
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E GC P+  +++ VI+ L ++ R SEA+   D + ++   P+VI YT L+ G CR G   
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++F +M+     PN+YTYS +I  LC+ G+   A      M E+GCEP   T++ L+
Sbjct: 601 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLV 656

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  R  +  Q+   MK  G   D   Y  L+  HCK+ +++ A+K+ +S+  KG  
Sbjct: 657 SGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQ 716

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            + S +  +   + K G V  A  ++  M + +   + + + +L+         D+ +KL
Sbjct: 717 LHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKL 776

Query: 450 KKEMEENEVEPNVNTYRIL 468
              ME     PN+ TY IL
Sbjct: 777 LHIMESKNFTPNIQTYVIL 795



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 198/443 (44%), Gaps = 18/443 (4%)

Query: 94  LSLGFSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 151
           +++G         + P+TV +  +I + C    G      L  F+W+       ++   Y
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELC---VGGRFSTALKIFHWMEGHGSLANT-QTY 411

Query: 152 HEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           +E+I    L G + +   A    + M       TV T++ L+  Y+  G    A    + 
Sbjct: 412 NEIIKGLCLGGDIEK---AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGN 267
           M+E GC PD+  ++ ++S   +  +   A  +F  + +    P+ + YT L+ G  + G 
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +  A  + + M+  G  PNV +Y+ VI+ L +  + + A  +  +M+E G  PN IT+  
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    +  RT+   ++++ M++  C  +  TY+ LI   C++GK ++A      M   G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIG 644

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
           C P   T++ +   + + G    A ++   MK+    P+   Y  L+     +   D  L
Sbjct: 645 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 704

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           K+   +E    + +++ YR LI   C  G    A      M+E++       V+ +++  
Sbjct: 705 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE-WNADEIVWTVLVDG 763

Query: 508 LRRAGQLQKHEELVEKMVDRGFT 530
           L + G+L    +L+  M  + FT
Sbjct: 764 LLKEGELDLCMKLLHIMESKNFT 786



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 133/272 (48%), Gaps = 3/272 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K  +F  A    D M  + +   V T++ L+    R G    A   F+ ME
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           +  C P+   +S +I  LC++ +A EA+   +      EP +  Y+ LV G CR G   E
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAERMSEI---GCEPTLDTYSTLVSGLCRKGRFYE 667

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           AE++ ++MK  G  P+   Y  ++ A C+  ++  A  +F  +   G + +   +  L+ 
Sbjct: 668 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALIC 727

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              KA + E+   +++ M      AD I +  L+D   K+G+L+  +K+L+ M  K   P
Sbjct: 728 ALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTP 787

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           N  T+ ++ R +S++G    +  +  K+K LK
Sbjct: 788 NIQTYVILGRELSRIGKSIESEPLADKLKVLK 819



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 6/272 (2%)

Query: 263 CRAGNISEAERV---FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           CR  N  E  RV     E+   G   ++Y+ + ++  L +   +  A +++ +ML  G +
Sbjct: 138 CR--NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQ 195

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +TFN L+ +  K  +  +   + +Q+ +     D  TY  LI  HC++  L+ A  V
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + MV++GC+PN+ T++ +   +   G V+ A  M  +M +   EP   TY + +     
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +  +  ++L   M++    PNV TY  LI+    +G    A     +M++E  L P + 
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG-LVPNTV 374

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            Y  ++ +L   G+     ++   M   G  A
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLA 406


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 175/346 (50%), Gaps = 4/346 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L+R +  A     A      M+  G   +    SI++  LCR  R ++A   FD+ 
Sbjct: 27  TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86

Query: 245 KD--KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA-GIQPNVYTYSIVIDALCRCG 301
            +    +PDV+ YT L+ G C+ G +  A  +FR+M  A G +PN +TY+ ++D LC+  
Sbjct: 87  LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A  V  E  +    P+ +T+N LM    +  R ++ L  + QM   G     +++N
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            +I   C+  +L DA++V N M+ +  +PN  T++++   + K   ++ A ++  +M   
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C P+ V Y  L+  F+ +   D  L L + M      P+V TY ++I   C +G  ++A
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 326

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++  RE++  KC  P    Y  ++    RA ++ +  +++ +M  R
Sbjct: 327 HEIFRELVANKC-SPNVVTYSALIGGYCRASRVDEGGKVMREMACR 371



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 176/383 (45%), Gaps = 7/383 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I         D A+  +  M    ++    T SI+++   R G  A+A+  F+   
Sbjct: 28  YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87

Query: 211 EYGCA-PDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGN 267
           E   A PD ++++ +I+ LC+  R   A   F  +       P+   Y  LV G C+   
Sbjct: 88  ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 147

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +  A  V  E +     P+V TY+ ++ AL + G++  A   F +M E G  P  ++FN 
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 207

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++    +A R    L+V+N+M       + +TY+ +ID  CK  +L++A ++L+ MV +G
Sbjct: 208 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 267

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
           C P+   +  +    S  G ++ A  +  +M    C P+ VTY +++         D   
Sbjct: 268 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 327

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           ++ +E+  N+  PNV TY  LI  YC     +   K +REM      +P    Y  ++  
Sbjct: 328 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM----ACRPNVVTYNTMIWG 383

Query: 508 LRRAGQLQKHEELVEKMVDRGFT 530
           L    + ++   +  +M + GF 
Sbjct: 384 LSMVDRNEEAYGMFREMSECGFV 406



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 170/346 (49%), Gaps = 15/346 (4%)

Query: 130 QVLSFFNWVTARPEFVHS-PDL--YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDT 185
           Q L  F+   A  E  H+ PD+  Y  +IN   K+ + D A+  F  ++ +        T
Sbjct: 78  QALEHFD---ASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFT 134

Query: 186 FSILVRRYVRAGL--AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           ++ LV    +     AA AV    R  ++  APD + ++ +++ L +  R  EA + F  
Sbjct: 135 YNALVDGLCKQDRLDAARAVITEARKRDF--APDVVTYNTLMAALFQLGRVDEALATFTQ 192

Query: 244 LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + ++ + P ++ +  ++ G CRA  +++A  VF EM      PN+ TYS+VID LC+  Q
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A  +   M+  GC P+ + +  L+     A R +  L +  +M   GC  D +TY  
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           +ID  CK G+++DA ++   +V   C+PN  T++ +     +   V+   ++   M+++ 
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMA 369

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           C PN VTYN ++   +     +    + +EM E    P+  TYR L
Sbjct: 370 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 140/278 (50%), Gaps = 3/278 (1%)

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + Y  L+RG+C A ++  A  + REM + G+Q N  T SI++  LCRCG++ +A + F  
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 313 MLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-GCEADTITYNFLIDCHCKD 370
            LE+   +P+ +++  L+    K  R +    ++ +M    GC  +  TYN L+D  CK 
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            +L+ A  V+    ++   P+  T+N +   + +LG V+ A   + +M +    P  V++
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           N ++     ++     L++  EM + +  PN+ TY ++I   C     + A + +  M+ 
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           E C +P    Y  ++     AG+L     L+ +MV +G
Sbjct: 266 EGC-RPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 302



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 111/236 (47%), Gaps = 11/236 (4%)

Query: 98  FSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI 155
           F+Q+ T     P+ V    +I   C  R    L   L  FN +  R +F  +   Y  +I
Sbjct: 190 FTQM-TEEGYVPTLVSFNAIITGLCRARR---LADALEVFNEMIDR-DFHPNLVTYSVVI 244

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
           +   K  Q D A   +D M S      +  ++ LV  +  AG    A+    RM   GC 
Sbjct: 245 DGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI 304

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           PD + +++VI  LC+  R  +A   F  L  +K  P+V+ Y+ L+ G+CRA  + E  +V
Sbjct: 305 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 364

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
            REM     +PNV TY+ +I  L    +   A+ +F EM E G  P++ T+  L R
Sbjct: 365 MREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKR 417



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%)

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           ++VTYN+L++ F  +   D    L +EM+   ++ N  T  I++   C  G    A ++ 
Sbjct: 24  SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +E    +P    Y  ++  L + G++    +L  KMV  G
Sbjct: 84  DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAG 126


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 185/413 (44%), Gaps = 37/413 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +IN   K  +   A   I  M    + ++  T++ L+  Y + GL  EA+  +  M 
Sbjct: 275 FNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV 334

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P   + + ++   C++ + S+A Q   D LK    PD+I Y  L+ G+CR GNI 
Sbjct: 335 TRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG 394

Query: 270 EAERVFREMKMA-----------------------------------GIQPNVYTYSIVI 294
           EA  +  E++                                     GI P+V TY++++
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV 454

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +  C+ G +  A + F EML VG  P+   +   +   +K   T K  ++  +M   G  
Sbjct: 455 NGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFP 514

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D ITYN  ++  CK G LE+A ++L  M+R G  P+  T+        + G +     +
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREI 574

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  M      P  VTY +L+   A +   D  +    EM+E  V PNV TY +LI  +C 
Sbjct: 575 FYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCK 634

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +   + A K+  EM +EK + P    Y +++ +    G+ Q+   L  +M+ +
Sbjct: 635 VRKMDQACKFFIEM-QEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGK 686



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 182/399 (45%), Gaps = 9/399 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF  V  +P F  S   +  ++ +         A+  ++ + S  +   VD   +L+ 
Sbjct: 123 LRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGIVD---VLIG 179

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEP 250
            Y    L  + +  F +M      PD    + ++ IL  K    +A   +  + +    P
Sbjct: 180 GY----LNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRP 235

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
            V  Y  ++  +C+ G +  A  +  +M+  G  P+  T++++I+ L + G++ +A  + 
Sbjct: 236 TVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLI 295

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM + G   +  T+N L+  + K     + L ++ +M   G      ++N ++   CK+
Sbjct: 296 QEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKE 355

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           GK+ DA + L+ M++K   P+  ++N +     +LG++  A  +  +++      N VTY
Sbjct: 356 GKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTY 415

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           N L+         +  LKLK++M    + P+V TY +L+   C +G+   A ++  EM+ 
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              L P    Y   +    + G   K  +L E+M+ +GF
Sbjct: 476 VG-LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGF 513


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 177/347 (51%), Gaps = 2/347 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TFS L+  Y + G   +A   F+ M   G  PD I +SI+I  L +  R  + Q    
Sbjct: 307 VVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLL 366

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
              DK  + DV+ +++ +  + + G++    ++++ M   GI PNV + SI+I   C+ G
Sbjct: 367 VALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNG 426

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +I  A  +F ++L++G EP+ +T++ L+    K+        +Y  M +  CE DTI Y+
Sbjct: 427 RILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYS 486

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+  CK G + DA++     V +G +PN  T N +     +L  + GA ++Y  M  L
Sbjct: 487 VLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGML 546

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             + +TVTY IL++  A     D  L L  +M + + +P+V TY  LI   C +   ++A
Sbjct: 547 NIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK-SSA 605

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              I + + +  + P  ++Y +++    R G L+    L   +V+RG
Sbjct: 606 GLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERG 652



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 185/385 (48%), Gaps = 4/385 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PDL  Y  +I+   K  + +     + +   + +++ V  FS  +  YV+ G     + 
Sbjct: 339 TPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQ 398

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWC 263
            + RM   G +P+ ++ SI+I   C+  R  EA   F   LK  FEP ++ Y+ L+ G+C
Sbjct: 399 IYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFC 458

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           ++GN+ +   ++ +M     +P+   YS++I+ LC+ G +  A   F + +  G  PN  
Sbjct: 459 KSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVF 518

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T N L+    +       ++VY  M  L  +ADT+TY  LI    + G++++A+ +   M
Sbjct: 519 TLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQM 578

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           ++K   P+  T+  +   + KL   +    ++  M      P+   YN+L+ M +     
Sbjct: 579 LKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHL 638

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  L L   + E   +P+V T+  +I  YC     ++A +   +M  E+ L+P +  + +
Sbjct: 639 EAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ-LRPNAITFTI 697

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++    R G++     +  KM++ G
Sbjct: 698 LIDAFCREGRMDDAMLMFSKMLEEG 722



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 172/349 (49%), Gaps = 4/349 (1%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F+ ++K    E ++ T+S L+  + ++G   +  + +  M +  C PD I +S++I+ LC
Sbjct: 435 FVQILK-LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLC 493

Query: 230 RKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           ++    +A + FF ++     P+V     L+  +CR   I  A +V+  M M  I+ +  
Sbjct: 494 KQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTV 553

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+I+I    + G++  A  +F +ML+   +P+ IT+  L+    K  ++   L +++ M
Sbjct: 554 TYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFM 613

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            +     D   YN LI+ H ++G LE A+ +   +V +G  P+  TFN +  C      +
Sbjct: 614 CKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRL 673

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A +++ KM   +  PN +T+ IL+  F      D  + +  +M E   EPN+ TY  L
Sbjct: 674 DDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCL 733

Query: 469 ITMYC-GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
           I  Y        +  K   EM+E   + P    Y +++  L + G +++
Sbjct: 734 IHGYFKSQSMMESGLKLYNEMLENN-IAPNIVSYSILIDGLCKRGLMKE 781



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/459 (20%), Positives = 205/459 (44%), Gaps = 44/459 (9%)

Query: 90  TIPSLSLGFSQI-STAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSP 148
           T+ +   GF  + ST HS+       +IE  C  R G+   + +  F  V  +  FV SP
Sbjct: 150 TLDAFRDGFCDLDSTNHSV---VYGFLIESYC--RKGM-FDKSVDIFMHVCVKGIFV-SP 202

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD---------------TFSILVRRY 193
           ++ + ++                 L+ S  VE+ VD                +  ++ R+
Sbjct: 203 NVVYLLLG---------------SLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRF 247

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDV 252
           +  G     +     + + G   D I  + ++  +  +     A  +F+  ++   +P+V
Sbjct: 248 MNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNV 307

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + ++ L+  +C+ GN+ +A  +F  M   G+ P++  YSI+ID L + G++     +   
Sbjct: 308 VTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLV 367

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
            L+ G + + + F++ M  +VK     +V+Q+Y +M   G   + ++ + LI   C++G+
Sbjct: 368 ALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGR 427

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           + +A  +   +++ G  P+  T++ +     K G++     +Y  M   +CEP+T+ Y++
Sbjct: 428 ILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK--YIREMIE 490
           L+            L+   +     + PNV T   L+  +C +     A K  Y+  M+ 
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              +K  +  Y ++++   + G++ +   L  +M+ + F
Sbjct: 548 ---IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDF 583



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 37/283 (13%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           LM   N++    T++IL++   + G   EA+  F +M +    PD I +  +I  LC+ +
Sbjct: 542 LMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601

Query: 233 RASEAQSFFDSL-KDKFEPDVIVYTNLV---------------------RG--------- 261
           ++S     FD + K+   PD+ +Y  L+                     RG         
Sbjct: 602 KSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFN 661

Query: 262 -----WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
                +C    + +A ++F +M    ++PN  T++I+IDA CR G++  A  +F++MLE 
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721

Query: 317 GCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           G EPN +T++ L+  + K+ S  E  L++YN+M       + ++Y+ LID  CK G +++
Sbjct: 722 GPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKE 781

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           A       + K   P+   + ++ R   K+G +  A  +Y  M
Sbjct: 782 ASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNM 824



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 1/277 (0%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           VY  ++  +   G +    R  + +   G   ++ T + ++  +     I  A D F  +
Sbjct: 239 VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMV 298

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           + +G +PN +TF+ L+  + K    +K   +++ M   G   D I Y+ LID   K G+L
Sbjct: 299 VRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRL 358

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           ED  ++L   + KG   +   F+       K+GD+    ++Y +M +    PN V+ +IL
Sbjct: 359 EDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSIL 418

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++ F  +        L  ++ +   EP++ TY  LI  +C  G+  + +    +MI+++C
Sbjct: 419 IKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRC 478

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +P + VY +++  L + G +        + V+RG +
Sbjct: 479 -EPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLS 514



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 4/206 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +IN+  +    + A      +  R  +  V TF+ ++  Y       +AV 
Sbjct: 619 APDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQ 678

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
            F +M      P+ I F+I+I   CR+ R  +A   F   L++  EP+++ Y+ L+ G+ 
Sbjct: 679 LFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYF 738

Query: 264 RAGNISEAE-RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           ++ ++ E+  +++ EM    I PN+ +YSI+ID LC+ G +  A   F   L+    P+ 
Sbjct: 739 KSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDV 798

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQM 348
           I +  L+R + K  R  + + +Y+ M
Sbjct: 799 IAYTILIRGYCKVGRLTEAMMLYDNM 824



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 144 FVH------SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVR 195
           FVH       PD++  + MI      ++ D A      M S  +     TF+IL+  + R
Sbjct: 645 FVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCR 704

Query: 196 AGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA--QSFFDSLKDKFEPDVI 253
            G   +A+  F++M E G  P+ + +S +I    + +   E+  + + + L++   P+++
Sbjct: 705 EGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIV 764

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y+ L+ G C+ G + EA   FR      + P+V  Y+I+I   C+ G++T A  ++  M
Sbjct: 765 SYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNM 824

Query: 314 L 314
           L
Sbjct: 825 L 825



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 2/104 (1%)

Query: 185 TFSILVRRYVRA-GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T+S L+  Y ++  +    +  +N M E   AP+ +++SI+I  LC++    EA   F  
Sbjct: 729 TYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRC 788

Query: 244 LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
             DK   PDVI YT L+RG+C+ G ++EA  ++  M +  + P+
Sbjct: 789 ALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 198/413 (47%), Gaps = 11/413 (2%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
           VR  +P  Q L + N +  R   V   + ++ ++ L  K   F+ AW   +  K  NV++
Sbjct: 93  VRSQLPE-QALFYXNQMIGRG-LVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG-NVKL 149

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
            V +F I+++     G   +      +MEE G +P+ + ++ +I   C+       +  F
Sbjct: 150 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 209

Query: 242 DSLKDKFEPDVI----VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
             +    E DV+     YT L+ G+ + G   +   ++ +MK+ GI PNVYTY+ +I   
Sbjct: 210 YKMG---ELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 266

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C  G++  A ++F EM E G   N +T+N L+    +  R  +  ++  +MKR G   + 
Sbjct: 267 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 326

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           I+YN LID +C  G L+ A  + N M   G +P+ +T+N++    S+  +  G   M  +
Sbjct: 327 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 386

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M+     P+ VTY ILM     S + +   ++   ME+  +  ++  Y +LI   C +G 
Sbjct: 387 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 446

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              A K  + + +E  LKP   +Y  ++    + G   +   L+++M + G  
Sbjct: 447 MKEASKLFKSL-DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMV 498



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 164/321 (51%), Gaps = 2/321 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L+  + + GL  + +  + +M+  G  P+   ++ +I   C   + + A   FD +
Sbjct: 223 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 282

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +++    +V+ Y  L+ G C+   + EAER+   MK  G+ PN+ +Y+ +ID  C  G +
Sbjct: 283 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNL 342

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  +F +M   G  P+  T+N L+    +A  +  V  +  +M+  G     +TY  L
Sbjct: 343 DKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTIL 402

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +D   +   +E A ++ +SM + G   +   + ++   +  +GD+  A +++  + ++  
Sbjct: 403 MDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHL 462

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           +PN V YN ++  +    S+   L+L KEM EN + PNV +Y   I + C    W  A  
Sbjct: 463 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEV 522

Query: 484 YIREMIEEKCLKPGSSVYEMV 504
            +++MIE   LKP  S++ M+
Sbjct: 523 LLKDMIELG-LKPSISIWNMI 542



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 162/343 (47%), Gaps = 1/343 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++  +VR+ L  +A+   N+M   G  P    F+ ++ +L +     +A   F+  K   
Sbjct: 88  IINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNV 147

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           + DV  +  +++G C  G + +   V  +M+  G+ PNV  Y+ +ID  C+ G I R   
Sbjct: 148 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 207

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F +M E+    N  T+  L+    K    +  +++Y +MK  G   +  TYN +I   C
Sbjct: 208 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 267

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
            DGKL +A ++ + M  +G   N  T+N +   + +   V  A R+  +MK     PN +
Sbjct: 268 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 327

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           +YN L+  + +  + D    L  +M+ +   P++ TY ILI  +    +       +REM
Sbjct: 328 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 387

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            E + L P    Y +++  L R+  ++K  ++   M   G  A
Sbjct: 388 -EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVA 429



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 38/255 (14%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP+L  Y+ +I+    +   D A    + MKS     ++ T++IL+  +  A  +A    
Sbjct: 323 SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 382

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               ME  G +P K+ ++I++  L R     +A   + S+ K     D+ +Y  L+ G C
Sbjct: 383 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 442

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G++ EA ++F+ +    ++PN   Y+ +I   C+ G   RA  +  EM E G  PN  
Sbjct: 443 VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN-- 500

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
                                              +YN  I   CKD K  +A  +L  M
Sbjct: 501 ---------------------------------VASYNSTIXILCKDEKWTEAEVLLKDM 527

Query: 384 VRKGCNPNASTFNMI 398
           +  G  P+ S +NMI
Sbjct: 528 IELGLKPSISIWNMI 542



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 2/245 (0%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V  +  +I+A  R     +A     +M+  G  P S TFNNL+ + +K++  EK  +V+
Sbjct: 81  HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 140

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           N+ K    + D  ++  +I   C+ G L+   +VL  M   G +PN   +  +     K 
Sbjct: 141 NETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 199

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+    +++ KM +L    N  TY +L+  F         ++L ++M+   + PNV TY
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             +I   C  G  NNA++   EM  E+ +      Y  ++  L +  ++ + E L+ +M 
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEM-RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 318

Query: 526 DRGFT 530
             G +
Sbjct: 319 RDGLS 323



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 116/229 (50%), Gaps = 12/229 (5%)

Query: 106 SISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAG--KV 161
            +SP+ + +  +I+  C + +   L +  S FN + +  +   SP L    I +AG  + 
Sbjct: 321 GLSPNLISYNTLIDGYCSIGN---LDKASSLFNQMKSSGQ---SPSLATYNILIAGFSEA 374

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           +        +  M++R +  +  T++IL+   VR+    +A   ++ ME+ G   D   +
Sbjct: 375 KNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIY 434

Query: 222 SIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
            ++I  LC      EA   F SL +   +P+ ++Y  ++ G+C+ G+   A R+ +EM  
Sbjct: 435 GVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGE 494

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            G+ PNV +Y+  I  LC+  + T A  +  +M+E+G +P SI+  N++
Sbjct: 495 NGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKP-SISIWNMI 542


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 186/383 (48%), Gaps = 12/383 (3%)

Query: 148 PDL--YHEMINL---AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           PDL  Y+ +IN    AG +R+       +D+MKS  ++  V T++ L+      GL+ EA
Sbjct: 308 PDLCTYNILINGVCNAGSIRE---GLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVR 260
                +ME  G  P+++  +I +  LC++ +  E       L +   F PD++ Y  L++
Sbjct: 365 KKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIK 424

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
            + + G++S A  + REM   GI+ N  T + ++DALC+  ++  AH++     + G   
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIV 484

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           + +T+  L+  + +  + EK  +++++MKR+       T+N LI   C  GK E A++  
Sbjct: 485 DEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKF 544

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + +   G  P+  TFN I     K G V  A   Y +      +P+  T NIL+      
Sbjct: 545 DELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
             T+  L     +   E E +  TY  +I+ +C       AY  + EM EEK L+P    
Sbjct: 605 GMTEKALNFFNTL-ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM-EEKRLEPDRFT 662

Query: 501 YEMVLQQLRRAGQLQKHEELVEK 523
           Y  ++  L   G+L + +EL++K
Sbjct: 663 YNSIITSLMEDGKLSEADELLKK 685



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/533 (22%), Positives = 224/533 (42%), Gaps = 65/533 (12%)

Query: 43  PNSSPDTPFLSPEETLISE-KF---HSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGF 98
           P+ SP  P LS   +L+S  KF    SL+  + R +    S  N  L+P+  +       
Sbjct: 74  PSDSP-LPLLSVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHL------- 125

Query: 99  SQISTAHSISPSTVRHVIEKSCGVRHGIP--LLQVLSFFNWVTARPEFVHSPDLYHEMIN 156
                  S  PS     I  S  +  G P   LQV      +  +P  +    L   +I 
Sbjct: 126 -------SPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTL---LIG 175

Query: 157 LAGKVRQFDLAW--HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYG 213
           L      F +A      D M    V + V TF++LV  Y   G   +A+    RM  E+ 
Sbjct: 176 LVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFN 235

Query: 214 CAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             PD + ++ ++  + +K R S+ +    D  ++   P+ + Y NLV G+C+ G++ EA 
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           ++   MK   I P++ TY+I+I+ +C  G I    ++   M  +  +P+ +T+N L+   
Sbjct: 296 QIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGC 355

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCNPN 391
            +   + +  ++  QM+  G + + +T+N  +   CK+ K E+  + +  +V   G +P+
Sbjct: 356 FELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPD 415

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD------- 444
             T++ + +   K+GD++GA  M  +M     + NT+T N ++      +  D       
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLD 475

Query: 445 ----------------------------MVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
                                          ++  EM+  ++ P V T+  LI   C  G
Sbjct: 476 SAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHG 535

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               A +   E+ E   L P    +  ++    + G+++K  E   + +   F
Sbjct: 536 KTELAMEKFDELAESGLL-PDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSF 587


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 189/386 (48%), Gaps = 4/386 (1%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP LY  + ++N   +  Q   A  F+  M     E  + TF+ L+  +       +A+ 
Sbjct: 114 SPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALA 173

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F+++   G  P+ + ++ +I  LC+ R  + A   F+ + D    P+V+ Y +LV G C
Sbjct: 174 LFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLC 233

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G  S+A  + R+M   GIQPNV T++ +IDA  + G+I  A +++  M+++   P+  
Sbjct: 234 EIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVF 293

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+       R ++  Q++  M+  G   + +TY  LI   CK  ++ED  K+   M
Sbjct: 294 TYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEM 353

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            +KG   N  T+ ++ +    +G  + A  ++ +M   +  P+  TYN+L+     +   
Sbjct: 354 SQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYV 413

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  L + K M + E++ N+ TY I+I   C +G   +A+     +   K +KP    Y  
Sbjct: 414 EKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLF-SKGMKPNVITYTT 472

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++    R G + + + L +KM + GF
Sbjct: 473 MISGFCRRGFIHEADALFKKMKEDGF 498



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 197/418 (47%), Gaps = 15/418 (3%)

Query: 113 RHVIEKSCGVRHGI-PLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWH-F 170
           RH ++ S    HG  P L +  F  W+ A   +     L + + NL     QF+ A   F
Sbjct: 21  RHRLQIS---NHGASPTLSLCGFCFWIRAFSNY--RKILRNGLHNL-----QFNEALDLF 70

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
             ++ SR +   VD F+ L+    +       +  F +M+  G +P     +IV++ +CR
Sbjct: 71  TRMVHSRPLPSIVD-FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCR 129

Query: 231 KRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             +   A  F   + K  FEPD++ +T+L+ G+C    I +A  +F ++   G +PNV T
Sbjct: 130 SSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVT 189

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +I  LC+   +  A ++F +M + G  PN +T+N+L+    +  R      +   M 
Sbjct: 190 YTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMM 249

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G + + IT+  LID   K GK+ +A ++   M++    P+  T+  +   +   G ++
Sbjct: 250 KRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLD 309

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A +M+  M+     PN VTY  L+  F  SK  +   K+  EM +  +  N  TY +LI
Sbjct: 310 EARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLI 369

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
             YC +G  + A +   +M   +   P    Y ++L  L   G ++K   + + M  R
Sbjct: 370 QGYCLVGRPDVAQEVFNQMGSRRA-PPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKR 426



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 8/334 (2%)

Query: 132 LSFFNWVTA---RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L+ F+ +     RP  V     Y  +I+   K R  + A    + M    +   V T++ 
Sbjct: 172 LALFDQIVGMGFRPNVV----TYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDK 247
           LV      G  ++A      M + G  P+ I F+ +I    +  +  EA+  +  + +  
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             PDV  YT L+ G C  G + EA ++F  M+  G  PN  TY+ +I   C+  ++    
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +F EM + G   N+IT+  L++ +    R +   +V+NQM       D  TYN L+D  
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C +G +E A+ +   M ++  + N  T+ +I + + K+G V  A  ++  +     +PN 
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNV 467

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +TY  ++  F           L K+M+E+   PN
Sbjct: 468 ITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 137/335 (40%), Gaps = 43/335 (12%)

Query: 98  FSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI 155
           F QI       P+ V +  +I   C  RH    +++ +       RP  V    L   + 
Sbjct: 175 FDQI-VGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLC 233

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            +    R  D AW   D+MK R ++  V TF+ L+  +V+ G   EA   +  M +    
Sbjct: 234 EIG---RWSDAAWLLRDMMK-RGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 216 PDKIAFSIVISILCRKRRASEAQSFF-----------------------------DSLKD 246
           PD   ++ +I+ LC   R  EA+  F                             D  K 
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 247 KFE-------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
            +E        + I YT L++G+C  G    A+ VF +M      P++ TY++++D LC 
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G + +A  +F  M +   + N +T+  +++   K  + E    ++  +   G + + IT
Sbjct: 410 NGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVIT 469

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           Y  +I   C+ G + +A  +   M   G  PN S 
Sbjct: 470 YTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 196/399 (49%), Gaps = 8/399 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVR 191
           FF+ + A+    H PDL    + L G   +  +    +  + M+   +      ++IL+ 
Sbjct: 354 FFDSMAAKG---HKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILID 410

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEP 250
            Y + G+  EA+  F +M+E G  PD   +  VI+   R  R ++A   F+ +     +P
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRAHDV 309
           D IVY +L++G+C  GN+ +A+ +  EM   GI +PN   ++ +I++LC+ G++  A D+
Sbjct: 471 DTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDI 530

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  ++ +G  P+ ITFN+L+  +    + EK   V + M  +G E D +TY+ L+D +C+
Sbjct: 531 FDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCR 590

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +G+++D + +   M+ KG  P   T+ +I   +   G   GA +M  +M +     +  T
Sbjct: 591 NGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
             I++     +   D  + L K++    V+ N+     +I     +     A +   + I
Sbjct: 651 CGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELF-DSI 709

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               L P +S Y +++  L + G +++ + +   M   G
Sbjct: 710 SATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 182/387 (47%), Gaps = 5/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y   I+   K R  D A   +  M S   E    T++ ++  Y   G   E    
Sbjct: 260 PDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGM 319

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M   G  PD    +  +S LC+  ++ EA  FFDS+  K  +PD++ Y+ L+ G+  
Sbjct: 320 FREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAA 379

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + +   +F  M+  GI  +   Y+I+IDA  + G +  A  +F +M E G  P++ T
Sbjct: 380 EGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWT 439

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    +  R    +  +NQM  +G + DTI YN LI   C  G L  A ++++ M+
Sbjct: 440 YGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMM 499

Query: 385 RKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            +G   PN   FN I   + K G V  A  ++  +  +   P+ +T+N L+  +      
Sbjct: 500 SRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKM 559

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +    +   M    +EP+V TY  L+  YC  G  ++     REM+  K +KP +  Y +
Sbjct: 560 EKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREML-SKGVKPTTITYGI 618

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +L  L   G+    +++  +M++ G T
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTT 645



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 187 SILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           +IL++    A  + +AV+   +RM E G  PD I++S V+  LC   R+  A     ++ 
Sbjct: 158 NILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMV 217

Query: 246 DK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
            K     P+V+ Y  ++ G+ R G +S+A  +F EM   G+ P+V TYS  IDALC+   
Sbjct: 218 KKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARA 277

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + +A  V  +M+  G EP+ +T+N ++  +    + ++   ++ +M R G   D  T N 
Sbjct: 278 MDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNS 337

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
            +   CK GK ++A +  +SM  KG  P+  T++++    +  G V     ++  M+   
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNG 397

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
              +   YNIL+  +      D  + +  +M+E  V P+  TY  +I  +  MG   +A 
Sbjct: 398 IVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAM 457

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
               +MI    LKP + VY  ++Q     G L K +EL+ +M+ RG   RP
Sbjct: 458 DKFNQMIAMG-LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGI-PRP 506



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 175/370 (47%), Gaps = 5/370 (1%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R  DL    +   KS      V +++ ++  + R G  ++A + F+ M + G  PD + +
Sbjct: 208 RALDLLHTMVK--KSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTY 265

Query: 222 SIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           S  I  LC+ R   +A+     +  + FEPD + Y  ++ G+   G   E   +FREM  
Sbjct: 266 SSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR 325

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G+ P+++T +  + +LC+ G+   A + F  M   G +P+ +T++ L+  +        
Sbjct: 326 RGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVD 385

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           +L ++N M+  G  AD   YN LID + K G +++A+ +   M  +G  P+A T+  +  
Sbjct: 386 MLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIA 445

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-E 459
             S++G +  A   + +M  +  +P+T+ YN L+Q F    +     +L  EM    +  
Sbjct: 446 AFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPR 505

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           PN   +  +I   C  G    A + I +++     +P    +  ++      G+++K   
Sbjct: 506 PNTVFFNSIINSLCKEGRVVEA-QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFG 564

Query: 520 LVEKMVDRGF 529
           +++ M+  G 
Sbjct: 565 VLDAMISVGI 574



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 176/435 (40%), Gaps = 73/435 (16%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           ++ +L+ FN +      V    +Y+ +I+  GK    D A      M+ R V     T+ 
Sbjct: 383 VVDMLNLFNSMEGNG-IVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYG 441

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA--------------------------- 220
            ++  + R G  A+A+  FN+M   G  PD I                            
Sbjct: 442 TVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSR 501

Query: 221 ---------FSIVISILCRKRRASEAQSFFD---------------SLKDKF-------- 248
                    F+ +I+ LC++ R  EAQ  FD               SL D +        
Sbjct: 502 GIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEK 561

Query: 249 -------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
                        EPDV+ Y+ L+ G+CR G I +   +FREM   G++P   TY I++ 
Sbjct: 562 AFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILH 621

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            L   G+   A  +  EM+E G   +  T   ++    + +  ++ + ++ ++  +  + 
Sbjct: 622 GLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKF 681

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           +    N +ID   K  K E+A ++ +S+   G  PNAST+ ++   + K G V  A  M+
Sbjct: 682 NIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMF 741

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             M+   C P++   N ++++               +++   +    +T  ++++++   
Sbjct: 742 SLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRK 801

Query: 476 GHWNNAYKYIREMIE 490
           G +    K +  M +
Sbjct: 802 GKYREQIKSLPAMYQ 816



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 124/247 (50%), Gaps = 4/247 (1%)

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P V TY+I++D  CR  + T    +F   L+ G + + I  N L++    A R++  + V
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 345 -YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--GCNPNASTFNMIFRC 401
             ++M  LG E DTI+Y+ ++   C+D + + A+ +L++MV+K  GC+PN  ++N +   
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             + G+V+ A  ++ +M      P+ VTY+  +     +++ D    + ++M  N  EP+
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             TY  +I  Y  +G W       REM   + L P        +  L + G+ ++  E  
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREM-TRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355

Query: 522 EKMVDRG 528
           + M  +G
Sbjct: 356 DSMAAKG 362



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 137/353 (38%), Gaps = 74/353 (20%)

Query: 250 PDVIVYTNLVRGWCRA------------------------GNI-----SEAER------- 273
           P V  Y  L+   CRA                         NI       A+R       
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE--VGCEPNSITFNNLMRV 331
           +   M   G++P+  +YS V+ +LC   +  RA D+   M++   GC PN +++N ++  
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             +     K   ++++M + G   D +TY+  ID  CK   ++ A  VL  M+  G  P+
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 392 ASTFNMIFRCISKLGDVNGAHRMY------GKMKDL-KC--------------------- 423
             T+N +    S LG       M+      G M D+  C                     
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 424 -------EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
                  +P+ VTY++L+  +A       +L L   ME N +  + + Y ILI  Y   G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             + A     +M +E+ + P +  Y  V+    R G+L    +   +M+  G 
Sbjct: 417 MMDEAMLIFTQM-QERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 191/401 (47%), Gaps = 7/401 (1%)

Query: 131 VLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            L  F+W   + ++    D  +   +I++ GK  +   A +  + ++     + V +++ 
Sbjct: 154 ALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTS 213

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQSFFDSLK-D 246
           L+  +  +G   EAV+ F +MEE GC P  I +++++++  +     ++  S  + +K D
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273

Query: 247 KFEPDVIVYTNLVRGWCRAGNI-SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
              PD   Y  L+   C+ G++  EA +VF EMK AG   +  TY+ ++D   +  +   
Sbjct: 274 GIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKE 332

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  V  EM   G  P+ +T+N+L+  + +    ++ +++ NQM   G + D  TY  L+ 
Sbjct: 333 AMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              + GK+E A+ +   M   GC PN  TFN   +     G      +++ ++      P
Sbjct: 393 GFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSP 452

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + VT+N L+ +F  +     V  + KEM+     P   T+  LI+ Y   G +  A    
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           R M++   + P  S Y  VL  L R G  ++ E+++ +M D
Sbjct: 513 RRMLDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 190/417 (45%), Gaps = 38/417 (9%)

Query: 151 YHEMINLAGKVRQ-FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ ++N+ GK+   ++     ++ MKS  +     T++ L+    R  L  EA   F  M
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNI 268
           +  G + DK+ ++ ++ +  +  R  EA    + ++ + F P ++ Y +L+  + R G +
Sbjct: 306 KAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGML 365

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN-- 326
            EA  +  +M   G +P+V+TY+ ++    R G++  A ++F EM   GC+PN  TFN  
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAF 425

Query: 327 ---------------------------------NLMRVHVKASRTEKVLQVYNQMKRLGC 353
                                             L+ V  +     +V  V+ +MKR G 
Sbjct: 426 IKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             +  T+N LI  + + G  E A+ V   M+  G  P+ ST+N +   +++ G    + +
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M+D +C+PN +TY  L+  +A  K   ++  L +E+    +EP     + L+ +  
Sbjct: 546 VLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCS 605

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
                  A +   E+ +E+   P  +    ++    R   + K  E+++ M +RGFT
Sbjct: 606 KCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFT 661



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/439 (20%), Positives = 192/439 (43%), Gaps = 43/439 (9%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAG--KVR 162
           +  SPS V +    S   R G+ L + +   N +  +      PD++     L+G  +  
Sbjct: 343 NGFSPSIVTYNSLISAYARDGM-LDEAMELKNQMAEKGT---KPDVFTYTTLLSGFERAG 398

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + + A +  + M++   +  + TF+  ++ Y   G   + +  F+ +   G +PD + ++
Sbjct: 399 KVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWN 458

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            ++++  +    SE    F  +K   F P+   +  L+  + R G+  +A  V+R M  A
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA------ 335
           G+ P++ TY+ V+ AL R G   ++  V AEM +  C+PN +T+ +L+  +         
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578

Query: 336 -SRTEKVL----------------------------QVYNQMKRLGCEADTITYNFLIDC 366
            S  E+V                             + ++++K  G   D  T N ++  
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           + +   +  A +VL+ M  +G  P+ +T+N +    S+  D   +  +  ++     +P+
Sbjct: 639 YGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            ++YN ++  +  +       ++  EM ++ + P+V TY   I  Y     +  A   +R
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758

Query: 487 EMIEEKCLKPGSSVYEMVL 505
            MI+  C +P  + Y  ++
Sbjct: 759 YMIKHGC-RPNQNTYNSIV 776



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 141/306 (46%), Gaps = 1/306 (0%)

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           +TF+ L+  Y R G   +A+  + RM + G  PD   ++ V++ L R     +++     
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           ++D + +P+ + Y +L+  +     I     +  E+    I+P       ++    +C  
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A   F+E+ E G  P+  T N+++ ++ +     K  +V + MK  G      TYN 
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNS 669

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+  H +      + ++L  ++ KG  P+  ++N +     +   +  A R++ +M+D  
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSG 729

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN  +  +A     +  + + + M ++   PN NTY  ++  YC +   + A 
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789

Query: 483 KYIREM 488
            ++ ++
Sbjct: 790 LFVEDL 795



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 138/317 (43%), Gaps = 36/317 (11%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV   + ++ +I+   +   F+ A      M    V   + T++ ++    R G+  
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541

Query: 201 EAVHAFNRMEEYGCAPDKIA------------------------FSIVIS---------- 226
           ++      ME+  C P+++                         +S VI           
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601

Query: 227 ILCRK-RRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           ++C K     EA+  F  LK++ F PD+    ++V  + R   + +A  V   MK  G  
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFT 661

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P++ TY+ ++    R     ++ ++  E+L  G +P+ I++N ++  + + +R     ++
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +++M+  G   D ITYN  I  +  D   E+AI V+  M++ GC PN +T+N I     K
Sbjct: 722 FSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781

Query: 405 LGDVNGAHRMYGKMKDL 421
           L   + A      +++L
Sbjct: 782 LNRKDEAKLFVEDLRNL 798



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 65/139 (46%), Gaps = 2/139 (1%)

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
           S   ++   + K G V+ A  ++  +++     +  +Y  L+  FA S      + + K+
Sbjct: 174 SVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233

Query: 453 MEENEVEPNVNTYRILITMYCGMGH-WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           MEE   +P + TY +++ ++  MG  WN     + +M +   + P +  Y  ++   +R 
Sbjct: 234 MEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM-KSDGIAPDAYTYNTLITCCKRG 292

Query: 512 GQLQKHEELVEKMVDRGFT 530
              Q+  ++ E+M   GF+
Sbjct: 293 SLHQEAAQVFEEMKAAGFS 311


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 187/367 (50%), Gaps = 2/367 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
            + +QF+L   F   ++   +   + T +I++  + R      A     ++ + G  PD 
Sbjct: 99  ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             F+ +I+ LC + + S+A    D + ++  +PD++ Y ++V G CR+G+ S A  + R+
Sbjct: 159 TTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRK 218

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+   ++ +V+TYS +ID+LCR G I  A  +F EM   G + + +T+N+L+R   KA +
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
                 +   M       + IT+N L+D   K+GKL++A ++   M+ +G +PN  T+N 
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +         ++ A+ M   M   KC P+ VT+  L++ +   K  D  +K+ + + +  
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           +  N  TY IL+  +C  G    A +  +EM+    L P    Y ++L  L   G+L+K 
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKA 457

Query: 518 EELVEKM 524
            E+ E +
Sbjct: 458 LEIFEDL 464



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 183/363 (50%), Gaps = 2/363 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MIN   +  +   A+  +  +     E    TF+ L+      G  ++AV   +RM E G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD + ++ +++ +CR    S A      ++++  + DV  Y+ ++   CR G I  A 
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F+EM+  GI+ +V TY+ ++  LC+ G+      +  +M+     PN ITFN L+ V 
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           VK  + ++  ++Y +M   G   + ITYN L+D +C   +L +A  +L+ MVR  C+P+ 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TF  + +    +  V+   +++  +       N VTY+IL+Q F  S    +  +L +E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  + V P+V TY IL+   C  G    A +   ++ + K +  G  +Y  +++ + + G
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTIIEGMCKGG 487

Query: 513 QLQ 515
           +++
Sbjct: 488 KVE 490



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 189/387 (48%), Gaps = 4/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ ++N   +     LA+  +  M+ RNV+  V T+S ++    R G    A+  
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  ME  G     + ++ ++  LC+  + ++      D +  +  P+VI +  L+  + +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA  +++EM   GI PN+ TY+ ++D  C   +++ A+++   M+   C P+ +T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           F +L++ +    R +  ++V+  + + G  A+ +TY+ L+   C+ GK++ A ++   MV
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  T+ ++   +   G +  A  ++  ++  K +   V Y  +++        +
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
               L   +    V+PNV TY ++I+  C  G  + A   +R+M EE    P    Y  +
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM-EEDGNAPNDCTYNTL 549

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++   R G L    +L+E+M   GF+A
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSA 576



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 167/322 (51%), Gaps = 1/322 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++    K  +++     +  M SR +   V TF++L+  +V+ G   EA   +  M 
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P+ I ++ ++   C + R SEA +  D + ++K  PD++ +T+L++G+C    + 
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +  +VFR +   G+  N  TYSI++   C+ G+I  A ++F EM+  G  P+ +T+  L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + EK L+++  +++   +   + Y  +I+  CK GK+EDA  +  S+  KG  
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+ ++   + K G ++ A+ +  KM++    PN  TYN L++            KL
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565

Query: 450 KKEMEENEVEPNVNTYRILITM 471
            +EM+      + ++ +++I M
Sbjct: 566 IEEMKSCGFSADASSIKMVIDM 587



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 3/262 (1%)

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITFNNL 328
           +A  +F+EM  +   P +  +S    A+ R  Q     D F + LE+ G   N  T N +
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNIM 129

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +  +T     V  ++ +LG E DT T+N LI+  C +GK+  A+ +++ MV  GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N I   I + GD + A  M  KM++   + +  TY+ ++         D  + 
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L KEME   ++ +V TY  L+   C  G WN+    +++M+  + + P    + ++L   
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVF 308

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            + G+LQ+  EL ++M+ RG +
Sbjct: 309 VKEGKLQEANELYKEMITRGIS 330



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 147/358 (41%), Gaps = 69/358 (19%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F + ++ +  P ++ ++       R    +      +++++ GI  N+YT +I+I+  CR
Sbjct: 76  FQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCR 135

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C +   A+ V  +++++G EP++ TFN L+       +  K + + ++M   GC+ D +T
Sbjct: 136 CCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVT 195

Query: 360 YN-----------------------------------FLIDCHCKDGKLEDAIKVLNSMV 384
           YN                                    +ID  C+DG ++ AI +   M 
Sbjct: 196 YNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG   +  T+N + R + K G  N    +   M   +  PN +T+N+L+ +F       
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC----------- 493
              +L KEM    + PN+ TY  L+  YC     + A   +  M+  KC           
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 494 -----------------------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                                  L   +  Y +++Q   ++G+++  EEL ++MV  G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 36/197 (18%)

Query: 370 DGKLEDAIKVLNSMVRK-----------------------------------GCNPNAST 394
           D K +DAI +   M+R                                    G   N  T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
            N++  C  +      A+ + GK+  L  EP+T T+N L+            + L   M 
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           EN  +P++ TY  ++   C  G  + A+  +R+M EE+ +K     Y  ++  L R G +
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM-EERNVKADVFTYSTIIDSLCRDGCI 244

Query: 515 QKHEELVEKMVDRGFTA 531
                L ++M  +G  +
Sbjct: 245 DAAISLFKEMETKGIKS 261


>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
          Length = 466

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 188/401 (46%), Gaps = 13/401 (3%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRNVEIT-VDTFSI 188
           FF W   +  + H P  Y+EMI++      K +QF +    +D MK  N  +  VD    
Sbjct: 43  FFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLE 102

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R+Y    L      A  +       P+  AF++++  LC+     E ++    ++ + 
Sbjct: 103 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRV 162

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PD   +  L  GWCR  +  +A ++  EM  AG +P  +TY   ID  C+ G +  A D
Sbjct: 163 KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAAD 222

Query: 309 VFAEMLEVGCE---PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +F  M+  G     P + TF  ++    K  + E+  ++  +M   GC  D  TY  +I+
Sbjct: 223 LFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIE 282

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C   K+++A K L+ M  KG  P+  T+N   R + +    + A ++YG+M + +C P
Sbjct: 283 GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAP 342

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK-- 483
           +  TYN+L+ MF      D       EM++ +   +V TY  +I    G+   + A +  
Sbjct: 343 SVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN---GLFDCHRAKEAC 399

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           ++ E +  K LK    V++  L +L   G L+   ++ E M
Sbjct: 400 FLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 440



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 35/295 (11%)

Query: 134 FFNWVTAR-PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           FF W   R P+   +  L  EMI    K   F                    T+   +  
Sbjct: 173 FFGWCRVRDPK--KAMKLLEEMIEAGHKPENF--------------------TYCAAIDT 210

Query: 193 YVRAGLAAEAVHAFNRMEEYGCA---PDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
           + +AG+  EA   F+ M   G A   P    F+++I  L +  +A E       +     
Sbjct: 211 FCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 270

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            PDV  Y +++ G C A  + EA +   EM   G  P++ TY+  +  LC   +   A  
Sbjct: 271 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK 330

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY----NFLI 364
           ++  M+E  C P+  T+N L+ +  +    +     + +M +  C  D  TY    N L 
Sbjct: 331 LYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF 390

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           DCH    + ++A  +L  +V KG       F+     +S++G++   H++   MK
Sbjct: 391 DCH----RAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 441


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 191/418 (45%), Gaps = 38/418 (9%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  LY+  I+  GK    D+AW F   +KS+ ++    +++ ++    +AG  +EA   
Sbjct: 250 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEEL 309

Query: 206 FNRME-----------------------------------EYGCAPDKIAFSIVISILCR 230
           F +ME                                   E GC P  ++F+ +++ L +
Sbjct: 310 FGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGK 369

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           KR+  EA + F+++K   EP+   Y  ++   C AG + EA  +  EM+ AG+ PN+ T 
Sbjct: 370 KRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTV 429

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I++D LC+  +   A+++F    + GC PNS+T+ +L+    K    +   +++  M  
Sbjct: 430 NIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLD 489

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G  A+ + Y  LI      G+ ED  K+   M R+GC P+ +  N    C+ K GDV  
Sbjct: 490 TGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEK 549

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              ++  +K     P+  +Y+IL+     +        +   M++     +   Y  ++ 
Sbjct: 550 GRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVD 609

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +C  G  + AY+ + EM + K + P  + Y  ++  L +  +L +   L E+   +G
Sbjct: 610 GFCKSGKLDKAYEVLEEM-KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKG 666



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 184/401 (45%), Gaps = 7/401 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           +V++    +  RP F      Y  +I    + RQ + A   +  M+    E+ V  F+ L
Sbjct: 168 RVIAAMRRLKFRPAF----SAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTL 223

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           VR   R G    A+   + ++     PD + +++ I    +      A  FF  LK +  
Sbjct: 224 VRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGL 283

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +PD + YT+++   C+AG +SEAE +F +M+     P  Y Y+ +I      GQ   A+ 
Sbjct: 284 KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYK 343

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +  ++ E GC P+ ++FN+++    K  + ++ L ++  MK+   E ++ TYN +ID  C
Sbjct: 344 LLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLC 402

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             GK+E+A  + + M   G  PN  T N++   + K      A+ M+       C PN+V
Sbjct: 403 MAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSV 462

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TY  L+       + D   +L + M +     N   Y  LI  +   G   + +K  +EM
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               C +P  ++    +  + +AG ++K   + E +   GF
Sbjct: 523 NRRGC-QPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF 562



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 171/372 (45%), Gaps = 5/372 (1%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           TV  ++++ C  +   P  ++    +     P  V     Y  +I+  GK    D A+  
Sbjct: 428 TVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVT----YCSLIDGLGKKGNVDDAYRL 483

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
            + M           ++ L+R +   G   +    F  M   GC PD    +  +  + +
Sbjct: 484 FENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFK 543

Query: 231 KRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                + ++ F+ +K   F PDV  Y+ L+ G  +AG   E   +F  MK  G   +   
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ V+D  C+ G++ +A++V  EM      P   T+ +++    K  R ++   ++ + K
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G E + I Y+ LID   K G++++A  +L  M++KG  PN  T+N +   + K  ++N
Sbjct: 664 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEIN 723

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A   +  MK++KC PNT TY+IL+      +  +      +EM++  + PNV TY  +I
Sbjct: 724 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMI 783

Query: 470 TMYCGMGHWNNA 481
                +G+  +A
Sbjct: 784 AGLAKVGNITDA 795



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 3/347 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           LV   VR     +A      M      P   A++++I  +   R+   A      +++  
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           +E  V ++T LVR   R G +  A  +  E+K + ++P++  Y++ ID   + G +  A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
             F E+   G +P+ +++ +++ V  KA R  +  +++ QM+          YN +I  +
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
              G+ E+A K+L+ +  +GC P+  +FN I  C+ K   V+ A  ++  MK    EPN+
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNS 391

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TYNI++ M   +   +    ++ EME   + PN+ T  I++   C    +  AY+    
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
             +  C  P S  Y  ++  L + G +     L E M+D G  A P+
Sbjct: 452 ASQRGC-NPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPV 497



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 178/379 (46%), Gaps = 5/379 (1%)

Query: 153 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           +M+ +AGKV +   A+   D M+   +   + T +I+V R  +A     A   F    + 
Sbjct: 399 DMLCMAGKVEE---AYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQR 455

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
           GC P+ + +  +I  L +K    +A   F+++ D     + +VYT+L+R +   G   + 
Sbjct: 456 GCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG 515

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            ++F+EM   G QP++   +  +D + + G + +   +F ++   G  P+  +++ L+  
Sbjct: 516 HKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHG 575

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             KA +  +   +++ MK+ G   D   YN ++D  CK GKL+ A +VL  M  K   P 
Sbjct: 576 LTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPT 635

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
            +T+  I   ++K+  ++ A+ ++ + K    E N + Y+ L+  F      D    + +
Sbjct: 636 VATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILE 695

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM +  + PNV T+  L+         N A    + M E KC  P +  Y +++  L R 
Sbjct: 696 EMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKC-SPNTYTYSILINGLCRV 754

Query: 512 GQLQKHEELVEKMVDRGFT 530
            +  K     ++M  +G  
Sbjct: 755 QKYNKAFVFWQEMQKQGLV 773



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 184/382 (48%), Gaps = 3/382 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L+  ++    +  + + A   +D +K   +E  +  +++ +  + +AG    A   F+ +
Sbjct: 219 LFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 278

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNI 268
           +  G  PD ++++ +I +LC+  R SEA+  F  ++ ++  P    Y  ++ G+  AG  
Sbjct: 279 KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQF 338

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A ++  ++K  G  P+V +++ ++  L +  ++  A  +F E ++   EPNS T+N +
Sbjct: 339 ENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNII 397

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + +   A + E+   + ++M+  G   + +T N ++D  CK  K E A ++  +  ++GC
Sbjct: 398 IDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGC 457

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           NPN+ T+  +   + K G+V+ A+R++  M D     N V Y  L++ F      +   K
Sbjct: 458 NPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHK 517

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + KEM     +P++      +      G      + I E I+     P    Y +++  L
Sbjct: 518 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKG-RAIFEDIKGYGFLPDVRSYSILIHGL 576

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            +AGQ ++   +   M  +GF 
Sbjct: 577 TKAGQARETSSIFHAMKQQGFA 598



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 1/254 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V ++SIL+    +AG A E    F+ M++ G A D  A++ V+   C+  +  +A    +
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            +K K   P V  Y +++ G  +   + EA  +F E K  GI+ NV  YS +ID   + G
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +I  A+ +  EM++ G  PN  T+N+LM   VKA    + L  +  MK + C  +T TY+
Sbjct: 686 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYS 745

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI+  C+  K   A      M ++G  PN  T+  +   ++K+G++  A  ++ + K  
Sbjct: 746 ILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKAN 805

Query: 422 KCEPNTVTYNILMQ 435
              P+  ++N L++
Sbjct: 806 GGTPDAASFNALIE 819



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 139/288 (48%), Gaps = 4/288 (1%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI 253
           +AG   +    F  ++ YG  PD  ++SI+I  L +  +A E  S F ++K + F  D  
Sbjct: 543 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDAR 602

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y  +V G+C++G + +A  V  EMK+  + P V TY  +ID L +  ++  A+ +F E 
Sbjct: 603 AYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA 662

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G E N I +++L+    K  R ++   +  +M + G   +  T+N L+D   K  ++
Sbjct: 663 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 722

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A+    SM    C+PN  T++++   + ++   N A   + +M+     PN VTY  +
Sbjct: 723 NEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTM 782

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +   A   +      L +  + N   P+  ++  LI    GM H N A
Sbjct: 783 IAGLAKVGNITDACSLFERFKANGGTPDAASFNALIE---GMSHANRA 827



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 4/271 (1%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG+ R+    +H    MK +   +    ++ +V  + ++G   +A      M+     P 
Sbjct: 579 AGQARETSSIFH---AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPT 635

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
              +  +I  L +  R  EA   F+  K K  E +VIVY++L+ G+ + G I EA  +  
Sbjct: 636 VATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILE 695

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           EM   G+ PNVYT++ ++DAL +  +I  A   F  M E+ C PN+ T++ L+    +  
Sbjct: 696 EMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 755

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           +  K    + +M++ G   + +TY  +I    K G + DA  +       G  P+A++FN
Sbjct: 756 KYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFN 815

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
            +   +S       A+ ++ + +   C  N 
Sbjct: 816 ALIEGMSHANRAIEAYHVFEETRLKGCRINV 846



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 134/308 (43%), Gaps = 37/308 (12%)

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +LV    R   + +AERV   M+    +P    Y+++I A+    Q  RA ++  +M E
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           VG E     F  L+R   +  R E  L + +++K    E D + YN  IDC  K G ++ 
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 270

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM----------------- 418
           A K  + +  +G  P+  ++  +   + K G ++ A  ++G+M                 
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330

Query: 419 ------------------KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
                             K+  C P+ V++N ++      +  D  L L + M+++  EP
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD-AEP 389

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           N +TY I+I M C  G    AY  IR+ +E   L P      +++ +L +A + +   E+
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAY-MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEM 448

Query: 521 VEKMVDRG 528
            E    RG
Sbjct: 449 FETASQRG 456



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 1/230 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA      M 
Sbjct: 639 YGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMM 698

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ ++  L +    +EA   F S+K+ K  P+   Y+ L+ G CR    +
Sbjct: 699 KKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYN 758

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   ++EM+  G+ PNV TY+ +I  L + G IT A  +F      G  P++ +FN L+
Sbjct: 759 KAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALI 818

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                A+R  +   V+ + +  GC  +      L+D   K   LE A  V
Sbjct: 819 EGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVV 868



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 115/270 (42%), Gaps = 7/270 (2%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F      Y+ +++   K  + D A+  ++ MK + V  TV T+  ++    +     EA 
Sbjct: 597 FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAY 656

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
             F   +  G   + I +S +I    +  R  EA    + + K    P+V  + +L+   
Sbjct: 657 MLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDAL 716

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            +A  I+EA   F+ MK     PN YTYSI+I+ LCR  +  +A   + EM + G  PN 
Sbjct: 717 VKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNV 776

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+  ++    K         ++ + K  G   D  ++N LI+      +  +A  V   
Sbjct: 777 VTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEE 836

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              KGC  N         CIS L  +N A 
Sbjct: 837 TRLKGCRINVKA------CISLLDALNKAE 860



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 1/220 (0%)

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V  EM  +G    +    +L+   V+  R +   +V   M+RL        Y  LI    
Sbjct: 134 VLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMA 193

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           +  + E A+++L  M   G       F  + R +++ G V GA  +  ++K    EP+ V
Sbjct: 194 EARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIV 253

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YN+ +  F  + + DM  K   E++   ++P+  +Y  +I + C  G  + A +   +M
Sbjct: 254 LYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM 313

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             E+ + P +  Y  ++     AGQ +   +L++++ +RG
Sbjct: 314 ETERAV-PCAYAYNTMIMGYGSAGQFENAYKLLDQLKERG 352


>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 3/378 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+ + G+  Q  +A    DL+      + V  ++ ++  Y R+G    A+  F++ME  G
Sbjct: 187 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIG 246

Query: 214 CAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
             P  + +++++ +  +  R+        D ++ K  E D    + ++    R G + EA
Sbjct: 247 LDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEA 306

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            +   E+K+ G +P    Y+ ++    + G  T A  +  EM +  C P+SIT+N L   
Sbjct: 307 RKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAAT 366

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +V+A   ++ + V + M   G   + ITY  +ID + K G+ +DA+++ + M   GC PN
Sbjct: 367 YVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPN 426

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+N +   + K        ++  +MK   C PN  T+N ++ + +     + V K+ +
Sbjct: 427 VYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLR 486

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM+    EP+ +T+  LI+ Y   G   ++ K   EM++     P  + Y  +L  L   
Sbjct: 487 EMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSG-FTPCVTTYNALLNALAHR 545

Query: 512 GQLQKHEELVEKMVDRGF 529
           G  +  E +++ M  +GF
Sbjct: 546 GDWKAAESVIQDMQTKGF 563



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 192/419 (45%), Gaps = 18/419 (4%)

Query: 110 STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV-RQFDLAW 168
           +T+ H   +S   +  I L   +     +   P  V     Y+ M+++ GK+ R +    
Sbjct: 220 TTILHAYARSGKYKRAIDLFDKME---GIGLDPTLV----TYNVMLDVYGKMGRSWGRIL 272

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
             +D M+S+ +E    T S ++    R G+  EA      ++  G  P  + ++ ++ + 
Sbjct: 273 ELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVF 332

Query: 229 CRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            +    +EA S    ++D    PD I Y  L   + RAG + E   V   M   G+ PN 
Sbjct: 333 GKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNA 392

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ VIDA  + G+   A  +F++M ++GC PN  T+N+++ +  K SRTE V++V  +
Sbjct: 393 ITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCE 452

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           MK  GC  +  T+N ++    ++GK     KVL  M   G  P+  TFN +    ++ G 
Sbjct: 453 MKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGS 512

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
              + +MYG+M      P   TYN L+   A          + ++M+    +PN  +Y +
Sbjct: 513 EVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSL 572

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV--------LQQLRRA-GQLQKH 517
           L+  Y   G+     K  +E+ + +       +  +V        L+ + RA  QLQK+
Sbjct: 573 LLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKY 631



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 181/378 (47%), Gaps = 20/378 (5%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I+  G+    D A  F+  +K    +     ++ +++ + +AG+  EA+     ME+  
Sbjct: 293 VISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNN 352

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD I ++ + +   R     E  +  D++  K   P+ I YT ++  + +AG   +A 
Sbjct: 353 CPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDAL 412

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV---GCEPNSITFNNLM 329
           R+F +MK  G  PNVYTY+ V+  L   G+ +R  DV   + E+   GC PN  T+N ++
Sbjct: 413 RLFSKMKDLGCAPNVYTYNSVLAML---GKKSRTEDVIKVLCEMKLNGCAPNRATWNTML 469

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            V  +  +   V +V  +MK  G E D  T+N LI  + + G   D+ K+   MV+ G  
Sbjct: 470 AVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFT 529

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P  +T+N +   ++  GD   A  +   M+    +PN  +Y++L+  ++ + +   + K+
Sbjct: 530 PCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKV 589

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM------IEEKCLKPGSSVYEM 503
           +KE+ + +V P+    R L+         N+  +++R M      +++   KP   V   
Sbjct: 590 EKEIYDGQVFPSWILLRTLVLS-------NHKCRHLRGMERAFDQLQKYGYKPDLVVINS 642

Query: 504 VLQQLRRAGQLQKHEELV 521
           +L    R     K  E++
Sbjct: 643 MLSMFSRNKMFSKAREML 660



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 174/415 (41%), Gaps = 37/415 (8%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ M+ + GK   +  A   +  M+  N      T++ L   YVRAG   E +   + M
Sbjct: 324 MYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTM 383

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNI 268
              G  P+ I ++ VI    +  R  +A   F  +KD    P+V  Y +++    +    
Sbjct: 384 TSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRT 443

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +  +V  EMK+ G  PN  T++ ++      G+    + V  EM   G EP+  TFN L
Sbjct: 444 EDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTL 503

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  + +        ++Y +M + G      TYN L++     G  + A  V+  M  KG 
Sbjct: 504 ISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGF 563

Query: 389 NPNASTFNMIFRCISKLGDV-----------------------------------NGAHR 413
            PN ++++++  C SK G+V                                    G  R
Sbjct: 564 KPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMER 623

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
            + +++    +P+ V  N ++ MF+ +K      ++   + E  ++PN+ TY  L+ +Y 
Sbjct: 624 AFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYV 683

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                  A + ++  I+    +P    Y  V++   R G +Q+   ++ +M  +G
Sbjct: 684 REDECWKAEEVLKG-IQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKG 737



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/443 (20%), Positives = 186/443 (41%), Gaps = 75/443 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+     +    D     ID M S+ V     T++ ++  Y +AG   +A+  F++M+
Sbjct: 360 YNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMK 419

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----------------------- 247
           + GCAP+   ++ V+++L +K R  +       +K                         
Sbjct: 420 DLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHN 479

Query: 248 -------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                        FEPD   +  L+  + R G+  ++ +++ EM  +G  P V TY+ ++
Sbjct: 480 YVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALL 539

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV---------- 344
           +AL   G    A  V  +M   G +PN  +++ L+  + KA     + +V          
Sbjct: 540 NALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVF 599

Query: 345 -------------------------YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                                    ++Q+++ G + D +  N ++    ++     A ++
Sbjct: 600 PSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREM 659

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L+ +   G  PN  T+N +     +  +   A  +   +++   EP+ V+YN +++ F  
Sbjct: 660 LHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCR 719

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                  +++  EM    ++P + TY   ++ Y GM  ++ A + IR MIE  C +P   
Sbjct: 720 KGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNC-RPSEL 778

Query: 500 VYEMVLQQLRRAGQLQKHEELVE 522
            Y++++    +AG   KHEE ++
Sbjct: 779 TYKILVDGYCKAG---KHEEAMD 798



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 149/318 (46%), Gaps = 1/318 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK+   E   DTF+ L+  Y R G   ++   +  M + G  P    ++ +++ L  +  
Sbjct: 488 MKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGD 547

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A+S    ++ K F+P+   Y+ L+  + +AGN+   E+V +E+    + P+      
Sbjct: 548 WKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRT 607

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++ +  +C  +      F ++ + G +P+ +  N+++ +  +     K  ++ + +   G
Sbjct: 608 LVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECG 667

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + +  TYN L+D + ++ +   A +VL  +      P+  ++N + +   + G +  A 
Sbjct: 668 LQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAI 727

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           R+  +M     +P  VTYN  +  +A  +  D   ++ + M E+   P+  TY+IL+  Y
Sbjct: 728 RVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGY 787

Query: 473 CGMGHWNNAYKYIREMIE 490
           C  G    A  ++ ++ E
Sbjct: 788 CKAGKHEEAMDFVTKIKE 805



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 142/315 (45%), Gaps = 3/315 (0%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D     +++ IL R+ + S A   FD +  +K+  DV  YT ++  + R+G    A  +F
Sbjct: 180 DNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLF 239

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQ-ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
            +M+  G+ P + TY++++D   + G+   R  ++  EM   G E +  T + ++    +
Sbjct: 240 DKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGR 299

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
               ++  +   ++K  G +  T+ YN ++    K G   +A+ +L  M    C P++ T
Sbjct: 300 EGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSIT 359

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N +     + G ++    +   M      PN +TY  ++  +  +   D  L+L  +M+
Sbjct: 360 YNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMK 419

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
           +    PNV TY  ++ M        +  K + EM    C  P  + +  +L      G+ 
Sbjct: 420 DLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGC-APNRATWNTMLAVCSEEGKH 478

Query: 515 QKHEELVEKMVDRGF 529
               +++ +M + GF
Sbjct: 479 NYVNKVLREMKNCGF 493



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 12/234 (5%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F +W+  R   + +    H+  +L G  R FD        ++    +  +   + ++  +
Sbjct: 599 FPSWILLRTLVLSN----HKCRHLRGMERAFDQ-------LQKYGYKPDLVVINSMLSMF 647

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDV 252
            R  + ++A    + + E G  P+   ++ ++ +  R+    +A+     +++   EPDV
Sbjct: 648 SRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDV 707

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + Y  +++G+CR G + EA RV  EM   GIQP + TY+  +           A++V   
Sbjct: 708 VSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRF 767

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           M+E  C P+ +T+  L+  + KA + E+ +    ++K +    D  +   L  C
Sbjct: 768 MIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDISFDDKSVKRLGSC 821



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 125/274 (45%), Gaps = 5/274 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N       +  A   I  M+++  +    ++S+L+  Y +AG           + 
Sbjct: 535 YNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIY 594

Query: 211 EYGCAPDKIAFSIVI--SILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           +    P  I    ++  +  CR  R  E    FD L K  ++PD++V  +++  + R   
Sbjct: 595 DGQVFPSWILLRTLVLSNHKCRHLRGMERA--FDQLQKYGYKPDLVVINSMLSMFSRNKM 652

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
            S+A  +   +   G+QPN++TY+ ++D   R  +  +A +V   +     EP+ +++N 
Sbjct: 653 FSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNT 712

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +++   +    ++ ++V ++M   G +   +TYN  +  +      ++A +V+  M+   
Sbjct: 713 VIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHN 772

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           C P+  T+ ++     K G    A     K+K++
Sbjct: 773 CRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEI 806


>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
 gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
          Length = 452

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 188/383 (49%), Gaps = 7/383 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L  F W   RP + H P+ Y  M+++ GK++Q D     ++ M +RN  +T++T    +
Sbjct: 57  ALGVFRWAGLRPGYKHRPEAYDMMVDILGKMKQMDQMRELLEEM-NRNHLVTLNTVGKAM 115

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
           RR+  AG   +AV  F+ +  +G   +  + ++++  LC++ +  +A++ F  LK    P
Sbjct: 116 RRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLELKSHILP 175

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   +   + GWC+A  + EA    +EMK    +P V +YS +I   CR    ++ +++ 
Sbjct: 176 NAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSKVYELL 235

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM   GC PN +T+  ++    K+  TE+ LQ+  +MK  GC+ DT  +N LI    + 
Sbjct: 236 DEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRMKSAGCKPDTPFFNSLIYILGRA 295

Query: 371 GKLEDAIKVL-NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD---LKCEPN 426
           G+ ++A+ V    M   G + + ST+N +   +   G V+ A  +  +M+     K +  
Sbjct: 296 GRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCHHGHVSKALSLLREMETSAPFKLDGQ 355

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           T  Y +L     T     +   L   ++++++  + + Y +LI   C       AY    
Sbjct: 356 TF-YPLLKSCLRTGDMNLLSQLLDDMVKKHQLSLDRSAYALLIHGLCRANKCQWAYHLFE 414

Query: 487 EMIEEKCLKPGSSVYEMVLQQLR 509
           EMI  K + P      M+L++++
Sbjct: 415 EMI-SKDIVPKYQTCHMLLEEVK 436



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 164/352 (46%), Gaps = 5/352 (1%)

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRME-EYGCAPDKIAFSIVISILCRKRRASE 236
           N+E++ D    L+ R+     +A  V  +  +   Y   P+  A+ +++ IL + ++  +
Sbjct: 35  NIEVSNDLVDKLLLRFKDDWKSALGVFRWAGLRPGYKHRPE--AYDMMVDILGKMKQMDQ 92

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            +   + +       +      +R +  AG   +A R+F E+   G++ N  + ++++D 
Sbjct: 93  MRELLEEMNRNHLVTLNTVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDT 152

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LC+ G++ +A  +F E L+    PN+ TFN  +    KA+  ++      +MK       
Sbjct: 153 LCKEGKVEQARAIFLE-LKSHILPNAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPC 211

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            I+Y+ +I  +C+        ++L+ M  +GC PN  T+  I   ++K  +   A ++  
Sbjct: 212 VISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQ 271

Query: 417 KMKDLKCEPNTVTYNILMQMFA-TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
           +MK   C+P+T  +N L+ +     +  + V   +KEM    V  + +TY  +I M C  
Sbjct: 272 RMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCHH 331

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           GH + A   +REM      K     +  +L+   R G +    +L++ MV +
Sbjct: 332 GHVSKALSLLREMETSAPFKLDGQTFYPLLKSCLRTGDMNLLSQLLDDMVKK 383



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 34/318 (10%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           G +PD+I  S+    +C     S      D L  +F+ D          W        A 
Sbjct: 17  GSSPDEILLSLADEQVCDNIEVS--NDLVDKLLLRFKDD----------W------KSAL 58

Query: 273 RVFREMKMAGIQPNVY----TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            VFR    AG++P        Y +++D L +  Q+    D   E+LE     + +T N +
Sbjct: 59  GVFR---WAGLRPGYKHRPEAYDMMVDILGKMKQM----DQMRELLEEMNRNHLVTLNTV 111

Query: 329 ---MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
              MR    A + E  +++++++   G E +  + N L+D  CK+GK+E A  +   + +
Sbjct: 112 GKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLEL-K 170

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
               PNA TFN+      K   V+ AH    +MK     P  ++Y+ ++  +    +   
Sbjct: 171 SHILPNAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSK 230

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
           V +L  EME     PNV TY  +I       +   A +  + M    C KP +  +  ++
Sbjct: 231 VYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRMKSAGC-KPDTPFFNSLI 289

Query: 506 QQLRRAGQLQKHEELVEK 523
             L RAG+ Q+  ++ EK
Sbjct: 290 YILGRAGRFQEAVDVFEK 307


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 201/433 (46%), Gaps = 11/433 (2%)

Query: 104 AHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           A  + P  V H  VI + C   +   L   L++F+ +    +  H    ++ ++    K 
Sbjct: 213 ARGVEPDVVIHNLVIRQLCASGN---LEDALAYFDELDDSLDLTHFT--FNPLVAALCKA 267

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
            + + A  F+  M  R    T+ T++ LV  +++ G   EA+       E G  PD + +
Sbjct: 268 ERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTY 327

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + +I  LC+  R  E    F  ++++ +EPD + Y  L+ G+ +A  I +A RV+R+M  
Sbjct: 328 TSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 387

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           +G   +  TY+I++D LC+ G++  A+  F  M E GC    +T++ LM           
Sbjct: 388 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 447

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            ++++ +M   GCE + ++YN +I   C+ GKL  A      ++++   P+  TFN    
Sbjct: 448 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLH 507

Query: 401 CI-SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
            +  +L  V     ++  M      PN  +Y+ILM     +   ++ L++  EM    V 
Sbjct: 508 GLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVA 567

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+V  +  LI   C  G  + A +  RE+  E+   P +  Y  +L  L R  ++++   
Sbjct: 568 PDVVVFNTLIRWLCIAGRVDEALEVFREL--ERRSAPDAWSYWSLLDALSRCERMEEARL 625

Query: 520 LVEKMVDRGFTAR 532
           L   M  +G   R
Sbjct: 626 LSFHMKLQGCAPR 638



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 179/392 (45%), Gaps = 11/392 (2%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P++V     Y+  I+   K  + D A+  +  M  +    T  T++ LV   ++AG   E
Sbjct: 74  PDYVT----YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVR 260
           A+    +M E G +P    +++VI  L +  R  EA+  F D L +   PD  VYT L+ 
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 261 GWCRAGNISEAERVFREMK----MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           G  + G + EA     +M       G++P+V  +++VI  LC  G +  A   F E L+ 
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LDD 248

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
             +    TFN L+    KA RTE+ +    +M    C     TY  L+D   K G+L++A
Sbjct: 249 SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEA 308

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +  L   V +G  P+A T+  I   + KLG V      + +M++   EP+ VTY  L+  
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 368

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
           F  +K      ++ ++M ++    +  TY I++   C  G    AY     M E  C+  
Sbjct: 369 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 428

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               Y  ++      G +    EL  +M+DRG
Sbjct: 429 -VVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 165/326 (50%), Gaps = 7/326 (2%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGN 267
           ++E  C+PD +AF++VI+ LCR++R  EA S  + +++   EPD + Y   + G C+A  
Sbjct: 32  LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAER 91

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A ++ ++M      P   TY+ ++D L + G++  A  +  +M+E G  P   T+  
Sbjct: 92  VDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTV 151

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++    KA R E+  +++  M   GC  D   Y  LI    K GKL++A+  LN MV  G
Sbjct: 152 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENG 211

Query: 388 C----NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           C     P+    N++ R +   G++  A   + ++ D   +    T+N L+     ++ T
Sbjct: 212 CARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD-SLDLTHFTFNPLVAALCKAERT 270

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  +   K+M E    P + TY  L+  +  +G  + A   ++E + E+   P +  Y  
Sbjct: 271 EEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAV-ERGFIPDAVTYTS 329

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++  L + G++++  E   +M +RG+
Sbjct: 330 IIDGLCKLGRVEEGCERFHEMRNRGY 355



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 166/349 (47%), Gaps = 6/349 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCA----PDKIAFSIVISILCRKRRASEAQSF 240
            ++ L+    + G   EA+   N+M E GCA    PD +  ++VI  LC      +A ++
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 241 FDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           FD L D  +     +  LV   C+A    EA    ++M      P ++TY+ ++D   + 
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G++  A     E +E G  P+++T+ +++    K  R E+  + +++M+  G E D +TY
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             LID   K   +  A +V   M++ G   +  T+N+I   + K G V  A+  +  M++
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 422

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
             C    VTY+ LM  F +  +    ++L + M +   EPN+ +Y I+I   C  G    
Sbjct: 423 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 482

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRG 528
           AY Y  ++++ + L P    +   L  L +R   +    EL E MV +G
Sbjct: 483 AYFYFEKLLQRR-LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 161/380 (42%), Gaps = 10/380 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++N   K  Q D A   +D M      +    F++++    R     EA     R    G
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEMPCSPDMVA---FTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD + +++ I  LC+  R  +A      + + K  P  + YT LV G  +AG + EA 
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +  +M   G  P + TY++VID L + G++  A  +F +ML  GC P++  +  L+   
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191

Query: 333 VKASRTEKVLQVYNQMKRLGC----EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
            K  + ++ L   NQM   GC    E D + +N +I   C  G LEDA+   + +     
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSL 250

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +    TFN +   + K      A     KM + +C P   TY  L+  F      D  L 
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
             KE  E    P+  TY  +I   C +G      +   EM   +  +P +  Y  ++   
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM-RNRGYEPDAVTYAALIDGF 369

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            +A  + K   +  +M+  G
Sbjct: 370 MKAKMIPKAHRVYRQMLQSG 389



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 9/286 (3%)

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           D+   D  V T L+ G C+ G +  A  +  EM  +   P++  +++VI+ LCR  ++  
Sbjct: 3   DRKLVDTRVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDE 59

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  V    +  GCEP+ +T+N  +    KA R +   Q+  +M    C   T+TY  L+D
Sbjct: 60  AFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVD 119

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
              K G+L++A+ +L  MV KG +P   T+ ++   +SK G V  A R++  M    C P
Sbjct: 120 GLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRP 179

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEEN----EVEPNVNTYRILITMYCGMGHWNNA 481
           +   Y  L+   A     D  L    +M EN     VEP+V  + ++I   C  G+  +A
Sbjct: 180 DAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDA 239

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
             Y  E+  +  L      +  ++  L +A + ++    V+KM +R
Sbjct: 240 LAYFDEL--DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSER 283



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 153/312 (49%), Gaps = 8/312 (2%)

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           + +++ LC+  +   A    D +     PD++ +T ++ G CR   + EA  V      A
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP--CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRA 70

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G +P+  TY++ ID LC+  ++  A  +  +M E  C P ++T+  L+   +KA R ++ 
Sbjct: 71  GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           + +  QM   G      TY  +ID   K G++E+A ++   M+  GC P+A  +  +   
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190

Query: 402 ISKLGDVNGAHRMYGKMKDLKC----EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           ++K+G ++ A     +M +  C    EP+ V +N++++    S + +  L    E++++ 
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDS- 249

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           ++    T+  L+   C       A  ++++M E +C  P    Y  ++    + G+L + 
Sbjct: 250 LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCF-PTLFTYTSLVDGFLKLGRLDEA 308

Query: 518 EELVEKMVDRGF 529
              +++ V+RGF
Sbjct: 309 LLQLKEAVERGF 320



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 3/148 (2%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDL---MKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           PD+Y     L G  ++ D     ++L   M S+     + ++SIL+    RAG     + 
Sbjct: 497 PDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLE 556

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
            F+ M   G APD + F+ +I  LC   R  EA   F  L+ +  PD   Y +L+    R
Sbjct: 557 IFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSR 616

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSI 292
              + EA  +   MK+ G  P  Y  ++
Sbjct: 617 CERMEEARLLSFHMKLQGCAPRHYDLTV 644


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 183/376 (48%), Gaps = 16/376 (4%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A HF   +   NV      F+ L+    R G   EAV   +RM E G  P++I +  ++ 
Sbjct: 165 ALHFFHQICKPNV----IAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 220

Query: 227 ILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            +C+      A +    +++  + +P+V++Y+ ++ G  + G  ++A+ +F EM+  GI 
Sbjct: 221 GMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS 280

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PN++TY+ +I+  C  G+ + A  +  EM E    P+ +TF+ L+   VK  +  +  ++
Sbjct: 281 PNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL 340

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           YN+M   G   +TITYN +ID   K  +L+ A ++   M  KGC+P+  TF+++      
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG 400

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
              V+   ++  +M       NT+TY  L+  F    + +  L L +EM  + V PNV T
Sbjct: 401 AKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKC----------LKPGSSVYEMVLQQLRRAGQL 514
              L+   C  G   +A +  + M + K           ++P    Y +++  L   G+ 
Sbjct: 461 CNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKF 520

Query: 515 QKHEELVEKMVDRGFT 530
            + EEL E+M  RG  
Sbjct: 521 SEAEELYEEMPHRGLV 536



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 174/356 (48%), Gaps = 5/356 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+ R +   + +F+IL++ +        A+  F ++ + G  P  + FS ++  LC + R
Sbjct: 102 MEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDR 161

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            SEA  FF  +    +P+VI +T L+ G CR G + EA  +   M   G+QPN  TY  +
Sbjct: 162 VSEALHFFHQI---CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 218

Query: 294 IDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +D +C+ G    A ++  +M EV   +PN + ++ ++    K  R      ++++M+  G
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG 278

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              +  TYN +I+  C  G+  +A ++L  M  +  +P+  TF+++   + K G    A 
Sbjct: 279 ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAE 338

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +Y +M      PNT+TYN ++  F+     D   ++   M      P+V T+ ILI  Y
Sbjct: 339 ELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGY 398

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           CG    ++  K + EM   + L   +  Y  ++    + G L    +L+++M+  G
Sbjct: 399 CGAKRVDDGMKLLHEM-SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 19/386 (4%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP+L  Y+ MIN      ++  A   +  M  R +   V TFS+L+   V+ G   EA  
Sbjct: 280 SPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEE 339

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            +N M   G  P+ I ++ +I    ++ R   A+  F  +  K   PDVI ++ L+ G+C
Sbjct: 340 LYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYC 399

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            A  + +  ++  EM   G+  N  TY+ +I   C+ G +  A D+  EM+  G  PN +
Sbjct: 400 GAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVV 459

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTITYNFLIDCHCKDGK 372
           T N L+       + +  L+++  M++              E D  TYN LI     +GK
Sbjct: 460 TCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGK 519

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             +A ++   M  +G  P+  T+N +   + K   ++ A +M+  M      P+ VT+  
Sbjct: 520 FSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTT 579

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  +         L++  EM    +  N  TYR LI  +C +G+ N A    +EMI   
Sbjct: 580 LINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSG 639

Query: 493 CLKPGSSVYEMVL-----QQLRRAGQ 513
                 ++  M+      ++L+RA Q
Sbjct: 640 VYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 140/255 (54%), Gaps = 8/255 (3%)

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
           R+M+M  I  N+Y+++I+I   C C ++  A   F ++ ++G  P+ +TF+ L+      
Sbjct: 100 RKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVE 159

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R  + L  ++Q+    C+ + I +  L++  C++G++ +A+ +L+ MV  G  PN  T+
Sbjct: 160 DRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 215

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDL-KCEPNTVTYN-ILMQMFATSKSTDMVLKLKKEM 453
             I   + K+GD   A  +  KM+++ + +PN V Y+ I+  ++   + TD    L  EM
Sbjct: 216 GTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTD-AQNLFSEM 274

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           +E  + PN+ TY  +I  +C  G W+ A + +REM E K + P    + +++  L + G+
Sbjct: 275 QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK-MSPDVVTFSVLINALVKEGK 333

Query: 514 LQKHEELVEKMVDRG 528
             + EEL  +M+ RG
Sbjct: 334 FFEAEELYNEMLPRG 348



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI 253
           ++ +  +A H FN +E     PD   ++I+I  L  + + SEA+  ++ +  +   PD I
Sbjct: 486 KSKMDLDASHPFNDVE-----PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTI 540

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y +++ G C+   + EA ++F  M   G  P+V T++ +I+  C+ G++    +VF EM
Sbjct: 541 TYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEM 600

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G   N+IT+  L+    +       L ++ +M   G   DTIT   ++       +L
Sbjct: 601 GRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 660

Query: 374 EDAIKVL 380
           + A++ L
Sbjct: 661 KRAVQCL 667



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 4/225 (1%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A D+F  M+     P  I F  L+ V V+  R + V+ ++ +M+      +  ++  LI 
Sbjct: 60  AIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIK 119

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           C C   KL  A+     + + G +P+  TF+ +   +     V+ A   + ++    C+P
Sbjct: 120 CFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKP 175

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N + +  LM            + L   M E+ ++PN  TY  ++   C MG   +A   +
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           R+M E   +KP   +Y  ++  L + G+    + L  +M ++G +
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS 280


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 191/432 (44%), Gaps = 61/432 (14%)

Query: 157 LAGKVRQFDLAW--HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           L+G +++  L W    I++M +         F+ LV  Y      A A    NRM   GC
Sbjct: 318 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 377

Query: 215 APDKIAFSIVISILCRKRR-----------------------------ASEAQSF----- 240
            P  + ++I I  +C + +                             A+ A+       
Sbjct: 378 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 437

Query: 241 FDS--------LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           FD         ++  F PD   Y+ ++   C A  + +A  +F+EMKM G+ P+VYTY+I
Sbjct: 438 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 497

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID+ C+ G I +A  +F EM  VGC P  +T+  L+  ++KA +  +   ++++M   G
Sbjct: 498 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 557

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMV----------------RKGCNPNASTFN 396
           C  + +TY  L+D  CK G +  A +V   ++                R    PN  T+ 
Sbjct: 558 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 617

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +   + K   V+ AH +   M    CEPN + Y+ L+  F  +   D   ++  +M + 
Sbjct: 618 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 677

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
              P+V+TY  LI      G  + A K + +M+++ C  P    Y  ++  L R G+ +K
Sbjct: 678 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC-TPNVVTYTAMIDGLCRIGESEK 736

Query: 517 HEELVEKMVDRG 528
             +L+  M ++G
Sbjct: 737 ALKLLSLMEEKG 748



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 155/319 (48%), Gaps = 21/319 (6%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R  FV     Y ++I       + + A+     MK   V   V T++IL+  + +AGL  
Sbjct: 450 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 509

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A   F  M   GC+P  + ++ +I    + ++  +A   F  + D    P+ + Y  LV
Sbjct: 510 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 569

Query: 260 RGWCRAGNISEAERVFREMKMAG------------------IQPNVYTYSIVIDALCRCG 301
            G C+AGNIS+A  V+   K+ G                  + PNV TY  ++D LC+  
Sbjct: 570 DGLCKAGNISKAFEVY--AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 627

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  AH++   ML  GCEPN I ++ L+    KA + +   +V+ QM + G      TY 
Sbjct: 628 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 687

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID   KDG+L+ A+KVL+ M++  C PN  T+  +   + ++G+   A ++   M++ 
Sbjct: 688 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 747

Query: 422 KCEPNTVTYNILMQMFATS 440
            C PN VTY  L+     S
Sbjct: 748 GCSPNVVTYTALIDGLGQS 766



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 167/367 (45%), Gaps = 18/367 (4%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            DLA      M + N  +     +   R     G   +A      M   G  PD   +S 
Sbjct: 403 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 462

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           VI+ LC   +  +A   F  +K     PDV  YT L+  +C+AG I +A+ +F EM+  G
Sbjct: 463 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 522

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P V TY+ +I A  +  Q+ +A+D+F  M++ GC PN +T+  L+    KA    K  
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582

Query: 343 QVYNQMKRLGCEADT----------------ITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +VY ++      AD+                +TY  L+D  CK  K++ A ++L++M+  
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 642

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC PN   ++ +     K G ++ A  ++ +M      P+  TY  L+         D+ 
Sbjct: 643 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 702

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +K+  +M ++   PNV TY  +I   C +G    A K +  ++EEK   P    Y  ++ 
Sbjct: 703 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL-SLMEEKGCSPNVVTYTALID 761

Query: 507 QLRRAGQ 513
            L ++ Q
Sbjct: 762 GLGQSWQ 768



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 21/338 (6%)

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           V +FD A+  I  M  +       T+S ++     A    +A   F  M+  G  PD   
Sbjct: 435 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 494

Query: 221 FSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++I+I   C+     +AQ  F+ ++     P V+ YT L+  + +A  + +A  +F  M 
Sbjct: 495 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 554

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG----------CE------PNSI 323
            AG +PN  TY  ++D LC+ G I++A +V+A+++             CE      PN +
Sbjct: 555 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 614

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+    KA + +   ++ + M   GCE + I Y+ LID  CK GK++ A +V   M
Sbjct: 615 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 674

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            + G  P+  T+  +   + K G ++ A ++  +M    C PN VTY  ++        +
Sbjct: 675 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 734

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH-WNN 480
           +  LKL   MEE    PNV TY  LI    G+G  W +
Sbjct: 735 EKALKLLSLMEEKGCSPNVVTYTALID---GLGQSWQD 769



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/441 (21%), Positives = 175/441 (39%), Gaps = 46/441 (10%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FF W   +  + H+   Y  + +  G   +   A   +  +   + E+     ++LVRR 
Sbjct: 125 FFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRC 184

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI-------------------------- 227
            R G+  EA+    R++++G  P K+ ++ ++ +                          
Sbjct: 185 CRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDR 244

Query: 228 ---------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
                    LC++ R ++A    +  ++ F+ D ++ T+++ G   A    EA      M
Sbjct: 245 FTVGCFAHALCKEGRWADALDMIE--REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 302

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +     PNV TY  ++    +  Q+     +   M+  GC PN   FN+L+  +      
Sbjct: 303 RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 362

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRKGCNPNA 392
               ++ N+M   GC    + YN  I   C   K      L+ A K+   M+   C  N 
Sbjct: 363 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 422

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
                  RC+  +G  + A ++  +M      P+T TY+ ++     +   +    L +E
Sbjct: 423 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 482

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M+   V P+V TY ILI  +C  G    A     EM    C  P    Y  ++    +A 
Sbjct: 483 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC-SPTVVTYTALIHAYLKAK 541

Query: 513 QLQKHEELVEKMVDRGFTARP 533
           Q+ +  ++  +MVD G   RP
Sbjct: 542 QVPQANDIFHRMVDAG--CRP 560


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 182/359 (50%), Gaps = 4/359 (1%)

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           +D M SR +     T+SIL   + R G +   +  F    + G        SI+++ LC+
Sbjct: 281 LDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCK 340

Query: 231 KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             + S+A+    +L +       ++Y  L+ G+C+ G++  A  +F++MK   I+P+  T
Sbjct: 341 DGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHIT 400

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +I+ L +  +IT AHD+  EM + G  P+  TFN L+  + +A + EK   + + M+
Sbjct: 401 YNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQ 460

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G + + ++Y  +++  CK+GK+ +A+ +L+ M  K   P A  +N I     + G  +
Sbjct: 461 EKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTD 520

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  +  KMK     P+ VTYN+L++            +L   +    + P+V +Y  LI
Sbjct: 521 QAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLI 580

Query: 470 TMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +  C   + + A +  +EM   KC +KP    Y M+   L  AG++ + E L ++M+D+
Sbjct: 581 SACCYRSNTDRALELEKEMW--KCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDK 637



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 179/368 (48%), Gaps = 10/368 (2%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC----APD 217
           R  D+   F  L+ +R    T  T++  V+  V AG   EAV    RM   GC    AP+
Sbjct: 132 RHADVRGAFELLVAARARPDTF-TWNKAVQACVVAGDLDEAVGMLRRM---GCDGAPAPN 187

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFR 276
             ++++VI+ L +     +A   FD + +K   P+ I Y  ++ G  + G++    R++ 
Sbjct: 188 AFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           +M   G++PNV TY++++  LCR G++     V  EM      P+  T++ L   H +  
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG 307

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
            ++ +L ++ +  + G +    T + L++  CKDGK+  A +VL ++V  G       +N
Sbjct: 308 DSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYN 367

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +     ++GD+ GA  ++ +MK     P+ +TYN L+      +       L  EME+N
Sbjct: 368 TLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKN 427

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            V P+V T+  LI  Y   G     +  + +M +EK LKP    Y  ++    + G++ +
Sbjct: 428 GVNPSVETFNTLIDAYGRAGQLEKCFIILSDM-QEKGLKPNVVSYGSIVNAFCKNGKILE 486

Query: 517 HEELVEKM 524
              +++ M
Sbjct: 487 AVAILDDM 494



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 168/359 (46%), Gaps = 38/359 (10%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           L+ S  ++ TV  ++ L+  Y + G    A   F +M+     PD I ++ +I+ L +  
Sbjct: 354 LVNSGLLQTTV-IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVE 412

Query: 233 RASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           R +EA      + K+   P V  +  L+  + RAG + +   +  +M+  G++PNV +Y 
Sbjct: 413 RITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYG 472

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +++A C+ G+I  A  +  +M      P +  +N ++  +++   T++   +  +MK  
Sbjct: 473 SIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSS 532

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G     +TYN LI   CK  ++ +A ++L+S+                            
Sbjct: 533 GVPPSIVTYNLLIKGLCKQSQISEAEELLDSL---------------------------- 564

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            R YG        P+ ++YN L+       +TD  L+L+KEM +  ++P+  TYR+L + 
Sbjct: 565 -RNYG------LAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSS 617

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             G G  +      ++M+++  + P S +Y +++    + G+  K E L ++M D+G  
Sbjct: 618 LGGAGRVHEMENLYQQMLDKDVV-PCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 1/310 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +IN   ++   + A+     MKSR +     T++ L+    +     EA      M
Sbjct: 365 IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM 424

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           E+ G  P    F+ +I    R  +  +       +++K  +P+V+ Y ++V  +C+ G I
Sbjct: 425 EKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKI 484

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  +  +M +  + P    Y+ +IDA   CG   +A  +  +M   G  P+ +T+N L
Sbjct: 485 LEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLL 544

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           ++   K S+  +  ++ + ++  G   D I+YN LI   C     + A+++   M + G 
Sbjct: 545 IKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGI 604

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+ M+F  +   G V+    +Y +M D    P +  YNI++  +A       V  
Sbjct: 605 KPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEA 664

Query: 449 LKKEMEENEV 458
           L+KEM +  +
Sbjct: 665 LRKEMSDKGI 674



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 3/298 (1%)

Query: 233 RASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI-QPNVYTY 290
           R ++ +  F+ L   +  PD   +   V+    AG++ EA  + R M   G   PN ++Y
Sbjct: 132 RHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSY 191

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           ++VI  L + G    A  +F EM E    PN IT+N ++  H+K    E   ++++QM R
Sbjct: 192 NVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLR 251

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G + + ITYN L+   C+ G++ +   VL+ M  +   P+  T++++F   S+ GD   
Sbjct: 252 HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQT 311

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
              ++ +      +    T +IL+             ++ + +  + +      Y  LI 
Sbjct: 312 MLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLIN 371

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            YC +G    A+   ++M + + ++P    Y  ++  L +  ++ +  +LV +M   G
Sbjct: 372 GYCQIGDLEGAFSIFQQM-KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 183/374 (48%), Gaps = 5/374 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           MI+  G++ + ++A    +  +       V  +S +V  Y R+G   EA+  F  M++ G
Sbjct: 206 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 265

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSF--FDSL-KDKFEPDVIVYTNLVRGWCRAGNISE 270
           C P+ I ++ +I   C K      Q+   FD + K+  EPD I + +L+    R G   +
Sbjct: 266 CKPNLITYNTIIDA-CGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWED 324

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           ++RVF EM+  GI+ +++T++ +IDA+C+ GQ+  A  +   M      PN +T++ ++ 
Sbjct: 325 SQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMID 384

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            + K    E+ + +Y+ MK  G   D ++YN LID + K G+ +DA+     M R G   
Sbjct: 385 GYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKA 444

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +  T+N +     K G    A  ++ KMK     PN +TY+ L+  ++ +     V  + 
Sbjct: 445 DVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVF 504

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            E +   ++P+V  Y  LI   C  G   +A   ++EM +   ++P    Y  ++    R
Sbjct: 505 TEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG-IQPNIVTYNSLIDAYGR 563

Query: 511 AGQLQKHEELVEKM 524
            GQ  K E +   M
Sbjct: 564 YGQADKLEAVKANM 577



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 178/390 (45%), Gaps = 34/390 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I+   K  Q +LA   +  M+ +N+   V T+S ++  Y + G   EA+  ++ M+
Sbjct: 344 FNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMK 403

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           E G  PD+++++ +I I  +  R  +A  +  D  +   + DV+ Y  L+  + + G   
Sbjct: 404 ESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYK 463

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F +MK  G+ PNV TYS +ID+  + G      +VF E    G +P+ + +++L+
Sbjct: 464 DAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLI 523

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE--DAIK--VLNSMVR 385
               K    E  + +  +M + G + + +TYN LID + + G+ +  +A+K  + NS+ +
Sbjct: 524 DSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQK 583

Query: 386 KG------------CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            G               NAS    +   +S          ++ +M+    +PN VT++ +
Sbjct: 584 IGERSMEVVRKPPPSQQNASDHTGVLAAVS----------VFHEMQQFGLKPNVVTFSAI 633

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH--WNNAYKYIREMIEE 491
           +   +   S      L ++M   +       Y I   +  G+    W  A +   E I  
Sbjct: 634 LNACSRCASLQEASVLLEQMRFFDGW----VYGIAHGLLMGLREQVWVEAQRLFDE-ISR 688

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
                G++ Y  +   L   GQ Q  +E+V
Sbjct: 689 MDYATGAAFYNALTDVLWHFGQRQGAQEVV 718



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 119/255 (46%), Gaps = 7/255 (2%)

Query: 266 GNISEAERVFREMKMAGIQPNVYT-----YSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           GN  E ER  +  +    Q ++ +      SI+I  L R G++  A DVF    + G   
Sbjct: 174 GNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGN 233

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG-KLEDAIKV 379
           N   ++ ++  + ++ R  + L+V+  MK+ GC+ + ITYN +ID   K G  L+ A+ +
Sbjct: 234 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDI 293

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + M ++G  P+  TFN +    S+ G    + R++ +M+    E +  T+N L+     
Sbjct: 294 FDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCK 353

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
               ++   +   M    + PNV TY  +I  Y  +G +  A     +M +E  ++P   
Sbjct: 354 GGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDM-KESGVRPDRV 412

Query: 500 VYEMVLQQLRRAGQL 514
            Y  ++    + G+ 
Sbjct: 413 SYNTLIDIYAKLGRF 427


>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
 gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 855

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 158/342 (46%), Gaps = 38/342 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF W+  +P F H    Y  M+   G+ +QF      +D M     +    T++ L+
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             Y RA    EA++ FN+M+E GC                                  EP
Sbjct: 402 HSYGRANYLKEAMNVFNQMQEAGC----------------------------------EP 427

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D + Y  L+    +AG +  A  +++ M+ AG+ P+ +TYS++I+ L + G +  AH +F
Sbjct: 428 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLF 487

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC--HC 368
            EM+  GC PN +TFN ++ +H KA   E  L++Y  M+  G + D +TY+ +++   HC
Sbjct: 488 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G LE+A  V   M RK   P+   + ++     K G+V+ A + Y  M      PN  
Sbjct: 548 --GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           T N L+  F           L + M    + P++ TY +L++
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 139/255 (54%), Gaps = 3/255 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  G + + +TY+ ++  L R  Q    + +  EM+  GC+PN++T+N L+  + +A+  
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           ++ + V+NQM+  GCE D +TY  LID H K G L+ A+ +   M   G +P+  T+++I
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G +  AHR++ +M    C PN VT+NI++ + A +++ +  LKL ++M+    
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           +P+  TY I++ +    G    A     EM + K   P   VY +++    +AG + K  
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589

Query: 519 ELVEKMVDRGFTARP 533
           +  + M+  G   RP
Sbjct: 590 QWYQAMLQAGL--RP 602


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 3/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+ ILV  + RAG   E           GCA   + ++ +I    R  R +EA   F+S 
Sbjct: 233 TYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFEST 292

Query: 245 KDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K   PDV  Y NL+   C++  + EA  +F+E +  G+  +V+TYS ++DA  + G+ 
Sbjct: 293 MTKESVPDVFTY-NLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRA 351

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A +VF  M + GC P+++ +N L+    K  + ++ L++   M R G   D  TYN +
Sbjct: 352 AKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 411

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID     G+ E A      M R+  +P+  T+N +   + KL   + A  ++ +M+  KC
Sbjct: 412 IDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKC 471

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  T+  L+   A +   +  L+    + +    PN   Y  LI+ +C  G  +  Y+
Sbjct: 472 MPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYE 531

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             ++MIE  C  P S  Y +++    R G      EL+++MV  G T
Sbjct: 532 LFQDMIECSCF-PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 577



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 173/387 (44%), Gaps = 38/387 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   +  Q      F++L +     ++   ++ +++ ++R G  AEA   F    
Sbjct: 234 YGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTM 293

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS---------------LKDKFE------ 249
                PD   ++++I+ LC+ ++  EA + F                 L D F       
Sbjct: 294 TKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAA 352

Query: 250 ---------------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                          PD +VY  L+    + G + EA  +  +M   GI P+  TY+IVI
Sbjct: 353 KALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVI 412

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           D L  CG+  +A+  F  M      P+ +T+N L+    K  RT++   ++++M+   C 
Sbjct: 413 DVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCM 472

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D  T+  LID   K G++EDA++    +V+ G  PN+  +N +     + G V+  + +
Sbjct: 473 PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYEL 532

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  M +  C P+++TY IL+  F+    T M ++L +EM      P + TY +LI     
Sbjct: 533 FQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSM 592

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVY 501
            G   +AY   +EMI  K   P    Y
Sbjct: 593 AGQVEDAYTLFKEMI-AKGFNPDMQTY 618



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 174/423 (41%), Gaps = 74/423 (17%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRR 233
           + + V ++  T +  ++ + RAG    A+   + M     C PD +AF+  +  LC  RR
Sbjct: 45  RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRR 104

Query: 234 ASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAG-IQPNVYTY 290
             +A + FD +++  +  PDV+ Y  L+ G+C+AG+   A  +FR +K  G  +PN  ++
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVG--------------------------------- 317
             ++  LC+  + T A  VF EML  G                                 
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTA 224

Query: 318 --CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
             C  ++ T+  L+  H +A +  +V       +  GC    + YNF+I    + G+L +
Sbjct: 225 HACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAE 284

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFR----------------------------------C 401
           A ++  S + K   P+  T+N++                                     
Sbjct: 285 ATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDA 344

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             K G    A  ++  M+   C P+TV YN+L+         D  L+L ++M    + P+
Sbjct: 345 FGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 404

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             TY I+I +    G +  AY +   M++ +   P    Y  +L  L++  +  +  +L 
Sbjct: 405 CRTYNIVIDVLSSCGRYEKAYSFF-GMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 463

Query: 522 EKM 524
           ++M
Sbjct: 464 DEM 466



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 159/333 (47%), Gaps = 39/333 (11%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I L  K +Q + A       +   V + V T+S L+  + +AG AA+A+  
Sbjct: 299 PDVFTYNLLIALC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEV 357

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEA---------------------------- 237
           F  M++ GC PD + ++++IS L ++ +  EA                            
Sbjct: 358 FYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSS 417

Query: 238 -------QSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                   SFF  +K  K  PDV+ Y  L+ G  +     EA  +F EM+     P++ T
Sbjct: 418 CGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTT 477

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           +  +ID L + G++  A +  A ++++G  PNS  +N L+    ++ + +K  +++  M 
Sbjct: 478 FGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMI 537

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
              C  D+ITY  L+    + G    A+++L  MVR+G  P  +T+N++ R +S  G V 
Sbjct: 538 ECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVE 597

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
            A+ ++ +M      P+  TY+ L  +   +KS
Sbjct: 598 DAYTLFKEMIAKGFNPDMQTYSALPNLSTPNKS 630



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 121/253 (47%), Gaps = 6/253 (2%)

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
            ++ +  AG+  + +T + ++  +C+ G+     ++ AE+ + G   + +T    ++   
Sbjct: 5   TYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFG 64

Query: 334 KASRTEKVLQVYNQMKRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-GCNPN 391
           +A   +  + + + M+R   C+ DT+ +   +   C+  ++E A+ + + M     C P+
Sbjct: 65  RAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPD 124

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMK-DLKCEPNTVTYNILMQMFA-TSKSTDMVLKL 449
              +N +     K GD + A  M+ ++K +  C+PN V+++ L+      S++TD  L +
Sbjct: 125 VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD-ALAV 183

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +EM    ++ +VN    LI   C +G    A + +  M    C +   + Y +++    
Sbjct: 184 FQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFT-YGILVNAHC 242

Query: 510 RAGQLQKHEELVE 522
           RAGQ+ +    +E
Sbjct: 243 RAGQMHEVASFME 255



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 2/193 (1%)

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            L  Y  + + G   D  T   ++   CK G+ E   ++L  + +KG   +  T     +
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 401 CISKLGDVNGAHRMYGKMKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN-EV 458
              + GD++ A  M   M+    C+P+TV +   M      +  +  + L  +M E  + 
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+V  Y  LI  YC  G  + A    R + +E   KP +  ++ ++  L +  +     
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 519 ELVEKMVDRGFTA 531
            + ++M+  G  A
Sbjct: 182 AVFQEMLGAGLKA 194


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 5/350 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNR-MEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           V  F+ L+  YV  G   EA    +  M   GC PD   ++ +I  LC+K     A+   
Sbjct: 353 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 412

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           + ++ K  EP+VI YT L+  +C+ G + EA  V  EM   G+  N   Y+ +I ALC+ 
Sbjct: 413 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 472

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            ++  A ++F +M   GC+P+  TFN+L+    K ++ E+ L +Y  M   G  A+TITY
Sbjct: 473 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 532

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N LI    + G +++A+K++N M+ +GC  +  T+N + + + + G++     ++  M  
Sbjct: 533 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
               PN ++ NIL+     + +    L+  ++M    + P++ TY  LI   C  G    
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 652

Query: 481 AYKYIREM-IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A     ++ +E  C  P +  Y  ++    + G       L+ + VD GF
Sbjct: 653 ALNLFDKLQVEGIC--PDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGF 700



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 5/349 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V+TF+  +    +     EA    +RM   G  P+   + +++  LCR  +  EA+   +
Sbjct: 287 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 346

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE-MKMAGIQPNVYTYSIVIDALCRCG 301
            + +   P+V+++  L+ G+   G + EA+ V  E M   G  P+++TY+ +I  LC+ G
Sbjct: 347 KVPN---PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 403

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A ++  EM   GCEPN IT+  L+    K  R E+   V ++M   G   + + YN
Sbjct: 404 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 463

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   CKD K++DA+ +   M  KGC P+  TFN +   + K+     A  +Y  M   
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
               NT+TYN L+  F    +    LKL  +M       +  TY  LI   C  G+    
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
                +M+  K L P +    +++  L R G +Q   E +  M+ RG T
Sbjct: 584 LALFEDMMS-KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 631



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 160/330 (48%), Gaps = 1/330 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+    + G    A    N M+  GC P+ I ++I+I   C++ R  EA++  D +
Sbjct: 391 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 450

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K    + + Y  L+   C+   + +A  +F +M   G +P+++T++ +I  LC+  + 
Sbjct: 451 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 510

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  ++ +ML  G   N+IT+N L+   ++    ++ L++ N M   GC  D ITYN L
Sbjct: 511 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 570

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C+ G +E  + +   M+ KG NPN  + N++   + + G++  A      M     
Sbjct: 571 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 630

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ VTYN L+     +      L L  +++   + P+  TY  LI+ +C  G +++A+ 
Sbjct: 631 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 690

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            +   ++   +    + Y +V   ++   Q
Sbjct: 691 LLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 720



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 189/503 (37%), Gaps = 107/503 (21%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +  F W   +  + H  D+Y+ +I+  G   +F      +  MK   +      F ++++
Sbjct: 95  MELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMK 154

Query: 192 RYVRAGLAAEAV------------------------------------HAFNRMEEYGCA 215
            Y RAGL  +A                                     + F  M   G +
Sbjct: 155 HYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGIS 214

Query: 216 PDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNL---------------- 258
           P    F +V+  LC       A +   D  +    P+ IVY  L                
Sbjct: 215 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKL 274

Query: 259 -------------------VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
                              + G C+   I EA ++   M + G  PN +TY +++  LCR
Sbjct: 275 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 334

Query: 300 CGQITRAHDVFAE--------------------------------MLEVGCEPNSITFNN 327
            G++  A  +  +                                ML VGC P+  T+N 
Sbjct: 335 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 394

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K        ++ N+M+  GCE + ITY  LID  CK+G+LE+A  VL+ M  KG
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              NA  +N +   + K   V  A  M+G M    C+P+  T+N L+         +  L
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQ 506
            L ++M    V  N  TY  LI  +   G    A K + +M+   C  P   + Y  +++
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC--PLDDITYNGLIK 572

Query: 507 QLRRAGQLQKHEELVEKMVDRGF 529
            L RAG ++K   L E M+ +G 
Sbjct: 573 ALCRAGNIEKGLALFEDMMSKGL 595



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 162/329 (49%), Gaps = 3/329 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PD++     + G  ++  L  A   ++ M+ +  E  V T++IL+ R+ + G   EA +
Sbjct: 386 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 445

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M   G A + + ++ +IS LC+  +  +A + F  +  K  +PD+  + +L+ G C
Sbjct: 446 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 505

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +     EA  ++++M + G+  N  TY+ +I A  R G +  A  +  +ML  GC  + I
Sbjct: 506 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 565

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L++   +A   EK L ++  M   G   + I+ N LI+  C+ G ++ A++ L  M
Sbjct: 566 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + +G  P+  T+N +   + K G    A  ++ K++     P+ +TYN L+         
Sbjct: 626 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 685

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMY 472
           D    L     ++   PN  T+ IL++ +
Sbjct: 686 DDAHLLLSRGVDSGFIPNEVTWYILVSNF 714



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 38/263 (14%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++  + +I    KV +F+ A      M    V     T++ L+  ++R G   EA+  
Sbjct: 492 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 551

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N M   GC  D I ++ +I  LCR     +  + F+ +  K   P+ I    L+ G CR
Sbjct: 552 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 611

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GNI  A    R+M   G+ P++ TY+ +I+ LC+ G+   A ++F ++   G  P++IT
Sbjct: 612 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 671

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N                                    LI  HCK+G  +DA  +L+  V
Sbjct: 672 YNT-----------------------------------LISWHCKEGMFDDAHLLLSRGV 696

Query: 385 RKGCNPNASTFNMIFRCISKLGD 407
             G  PN  T+ ++     K GD
Sbjct: 697 DSGFIPNEVTWYILVSNFIKEGD 719


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 6/348 (1%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           S DLY  + ++N   +  Q  LA  F+  M     E  + TF+ L+  +       EA+ 
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
             N+M E G  PD + ++ +I  LC+    + A S FD +++    PDV++YT+LV G C
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +G   +A+ + R M    I+P+V T++ +IDA  + G+   A +++ EM+ +   PN  
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+ +L+         ++  Q++  M+  GC  D + Y  LI+  CK  K++DA+K+   M
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            +KG   N  T+  + +   ++G  N A  ++  M      PN  TYN+L+     +   
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403

Query: 444 DMVLKLKKEMEENE---VEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
              L + ++M++ E   V PN+ TY +L+   C  G    A     +M
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 180/379 (47%), Gaps = 4/379 (1%)

Query: 151 YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y E++       QF+ A   F  +++SR +   +D F+ L+    +       ++  + +
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIID-FTKLLNVIAKMKKFDVVINLCDHL 98

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
           +  G + D    +++++  C+  +   A SF   + K  FEPD++ +T+L+ G+C    +
Sbjct: 99  QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  +  +M   GI+P+V  Y+ +ID+LC+ G +  A  +F +M   G  P+ + + +L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +     + R      +   M +   + D IT+N LID   K+GK  DA ++ N M+R   
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN  T+  +       G V+ A +M+  M+   C P+ V Y  L+  F   K  D  +K
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +  EM +  +  N  TY  LI  +  +G  N A +    M+  + + P    Y ++L  L
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV-SRGVPPNIRTYNVLLHCL 397

Query: 509 RRAGQLQKHEELVEKMVDR 527
              G+++K   + E M  R
Sbjct: 398 CYNGKVKKALMIFEDMQKR 416



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 176/385 (45%), Gaps = 41/385 (10%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  +  +IN      + + A   ++ M    ++  V  ++ ++    + G    A+  
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           F++ME YG  PD + ++ +++ LC   R  +A S    + K K +PDVI +  L+  + +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G   +AE ++ EM    I PN++TY+ +I+  C  G +  A  +F  M   GC P+ + 
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+    K  + +  ++++ +M + G   +TITY  LI    + GK   A +V + MV
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE---PNTVTYNILMQMFATSK 441
            +G  PN  T+N++  C+   G V  A  ++  M+  + +   PN  TYN+L+     + 
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439

Query: 442 STDMVLKLKKEMEENE-----------------------------------VEPNVNTYR 466
             +  L + ++M + E                                   V+PNV TY 
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499

Query: 467 ILITMYCGMGHWNNAYKYIREMIEE 491
            +I+     G  + A+   R+M E+
Sbjct: 500 TMISGLFREGLKHEAHVLFRKMKED 524



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 158/335 (47%), Gaps = 10/335 (2%)

Query: 106 SISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ 163
            I P  V +  +I+  C   H    L +         RP+ V    L + + N +G+ R 
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN-SGRWRD 230

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            D     +  M  R ++  V TF+ L+  +V+ G   +A   +N M     AP+   ++ 
Sbjct: 231 AD---SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287

Query: 224 VISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I+  C +    EA+  F  ++ K   PDV+ YT+L+ G+C+   + +A ++F EM   G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           +  N  TY+ +I    + G+   A +VF+ M+  G  PN  T+N L+       + +K L
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407

Query: 343 QVYNQMKRL---GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
            ++  M++    G   +  TYN L+   C +GKLE A+ V   M ++  +    T+ +I 
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           + + K G V  A  ++  +     +PN VTY  ++
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 141/282 (50%), Gaps = 24/282 (8%)

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           +F+ + +LY+EMI ++                    +   + T++ L+  +   G   EA
Sbjct: 262 KFLDAEELYNEMIRMS--------------------IAPNIFTYTSLINGFCMEGCVDEA 301

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG 261
              F  ME  GC PD +A++ +I+  C+ ++  +A   F  +  K    + I YT L++G
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV---GC 318
           + + G  + A+ VF  M   G+ PN+ TY++++  LC  G++ +A  +F +M +    G 
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            PN  T+N L+       + EK L V+  M++   +   ITY  +I   CK GK+++A+ 
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           +  S+  KG  PN  T+  +   + + G  + AH ++ KMK+
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 6/211 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +IN   K ++ D A      M  + +     T++ L++ + + G    A   
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK----DKFEPDVIVYTNLVRG 261
           F+ M   G  P+   +++++  LC   +  +A   F+ ++    D   P++  Y  L+ G
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C  G + +A  VF +M+   +   + TY+I+I  +C+ G++  A ++F  +   G +PN
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
            +T+  ++    +     +   ++ +MK  G
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score = 45.4 bits (106), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 39/172 (22%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I   G+V + ++A      M SR V   + T+++L+      G   +A+  F  M+
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414

Query: 211 EY---GCAPDKIAFSIVISILC---------------RKR-------------------- 232
           +    G AP+   +++++  LC               RKR                    
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474

Query: 233 RASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +   A + F SL  K  +P+V+ YT ++ G  R G   EA  +FR+MK  G+
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526


>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 183/402 (45%), Gaps = 9/402 (2%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRN-VEITVDT 185
            L FF W   + ++ H P  Y++M+++      KV+QF +    ++ MK  N   +  + 
Sbjct: 40  ALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNRTMVPAEV 99

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
             +++R+Y    L      A  +        +  AF++++  LC+     +A+S +  ++
Sbjct: 100 LLVILRKYTEKYLTHMQKFAKKKRIRVKTQLEINAFNLLLDALCKCCLVEDAESLYKKMR 159

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
              +P+   Y  LV GWCR  N +   ++  EM   G +P+ +TY+  ID  C+ G IT 
Sbjct: 160 KTVKPNAETYNILVFGWCRVRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITE 219

Query: 306 AHDVFAEMLEVGC---EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           A D+F  M   G     P + T+  ++    +  R E   ++   M   GC  D  TY  
Sbjct: 220 AVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSGCLPDVTTYKE 279

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           +I+  C  GK+++A K L  M  K   P+  T+N   + +        A ++YG+M +L 
Sbjct: 280 IIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELN 339

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C P+  TYN+L+ MF      D   +  +E++     P+ +TY ++I          +A 
Sbjct: 340 CIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPDTDTYCVMIEGLFNCNKMEDAC 399

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             + E+I E    P    ++  L QL   G LQ    L E M
Sbjct: 400 FLLEEVINEGVKLPYKK-FDSFLMQLSVIGDLQAIHRLSEHM 440



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 4/239 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGC---APDKIAFSIVISILCRKRRASEAQSFF 241
           T++  +  Y + G+  EAV  F  M   G    +P    ++I+I  L +  R  +     
Sbjct: 203 TYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLI 262

Query: 242 DSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             +      PDV  Y  ++ G C  G I EA +   EM     +P++ TY+  +  LC  
Sbjct: 263 GHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDN 322

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +   A  ++  M+E+ C P+  T+N L+ +  +    +   + + ++   GC  DT TY
Sbjct: 323 KKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPDTDTY 382

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
             +I+      K+EDA  +L  ++ +G       F+     +S +GD+   HR+   MK
Sbjct: 383 CVMIEGLFNCNKMEDACFLLEEVINEGVKLPYKKFDSFLMQLSVIGDLQAIHRLSEHMK 441


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 187/373 (50%), Gaps = 10/373 (2%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           G++ + D     + +M+ +   +   T +++VR + + G   +    F RM E G  P+ 
Sbjct: 199 GRMEEVDA---LLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNV 255

Query: 219 IAFSIVISILCRKRRASEAQSFF---DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + ++  I  LC+  RA   Q+F+   + +    +P+V  +T+L+ G C+ G    A R+F
Sbjct: 256 VNYTAWIDGLCK--RAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLF 313

Query: 276 REM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
            ++ K +  +PNV+TY+++I   C+ G++ RA  +   M+E G  PN+ T+  L+  H K
Sbjct: 314 LKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCK 373

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
                   ++ N+M+R G + +  TYN LID  CK GK+++A KVL     +G   +  T
Sbjct: 374 EGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVT 433

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           + ++     K G +  A  ++ +M +  C P+  TY  L+  +   +  +   KL  +  
Sbjct: 434 YTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCL 493

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
             E+ P   TY  +I  YC +G   +A +    M++  C +  S  Y  ++  L +  +L
Sbjct: 494 AIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGC-QADSITYGALISGLCKESRL 552

Query: 515 QKHEELVEKMVDR 527
           ++   L E M+D+
Sbjct: 553 EEARALYEGMLDK 565



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 168/351 (47%), Gaps = 7/351 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +P       L + +  +    R F L   F+ L+KS + +  V T+++++  Y + G  A
Sbjct: 287 KPNVYTHTSLINGLCKIGWTERAFRL---FLKLIKSSSYKPNVHTYTVMIGGYCKEGKLA 343

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLV 259
            A     RM E G AP+   ++ +IS  C++   + A    + ++ + F+P++  Y  L+
Sbjct: 344 RAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALI 403

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C+ G I EA +V R     G+Q +  TY+++I   C+ G IT A D+F  M E GC 
Sbjct: 404 DGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCH 463

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+  T+  L+  + +  + E+  +++++   +       TY  +I  +CK GK   A++V
Sbjct: 464 PDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRV 523

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              MV+ GC  ++ T+  +   + K   +  A  +Y  M D +  P  VT   L   +  
Sbjct: 524 FERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCR 583

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
            +   + + +   +++      VN   +L+     +GH  +A  ++++ ++
Sbjct: 584 REKAVVAVSILDRLDKRRKNHTVN---VLVRKLSAIGHVEDASLFLKKALD 631



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 4/313 (1%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLV-RGWCRAGNISEAERVFREM 278
           A   +++      R  EA      ++    P  +   N V R     G+ + A +VF  M
Sbjct: 116 AMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGM 175

Query: 279 -KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
               G+ P+  ++  +I   CR G++     +   M   G   ++ T   ++RV  +  R
Sbjct: 176 VTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGR 235

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
              V +++ +M  +G   + + Y   ID  CK   ++ A  VL  MV KG  PN  T   
Sbjct: 236 FRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTS 295

Query: 398 IFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           +   + K+G    A R++ K+ K    +PN  TY +++  +           L   M E 
Sbjct: 296 LINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 355

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + PN NTY  LI+ +C  G +N A++ + +M  E   +P    Y  ++  L + G++Q+
Sbjct: 356 GLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREG-FQPNIYTYNALIDGLCKKGKIQE 414

Query: 517 HEELVEKMVDRGF 529
             +++    ++G 
Sbjct: 415 AYKVLRMANNQGL 427


>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 466

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 186/382 (48%), Gaps = 6/382 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L  F W  +R  + HSP+ Y  M+++ GK++Q D     ++ M+ +   +T+ T    +R
Sbjct: 69  LGVFRWAESRAGYKHSPEAYDTMVDIMGKMKQMDQMEFLLEEME-KGQHVTLKTVGKAMR 127

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
           R+  A      +  F+++  +G   +  + ++++  LC++R+   A+  F  LK    P+
Sbjct: 128 RFAGARQWENVLRVFDKLGTFGLEKNTESMNLLLDTLCKERKVELAREIFLDLKSHISPN 187

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
              +   + GWC+   + EA    +EMK  G  P V +YS ++   C     ++ +++  
Sbjct: 188 ANTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVYELLD 247

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM   G  PN +T+ ++M    K+   E+ LQ+  +MK +GC+ DT+ YN LI    K G
Sbjct: 248 EMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAG 307

Query: 372 KLEDAIKVLN-SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK-DLKCEPNTVT 429
           + E+AI+V    M   G  PN ST+N +   +        A  +  +++  + C+P+  T
Sbjct: 308 RPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEIEASIICKPDVQT 367

Query: 430 YNILMQMFATSKSTDMVLK--LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           Y  L++    + S D +L   L   ++++ +  + + Y +L+   C       AY    E
Sbjct: 368 YYPLLKSCFKAGSIDSLLSQLLDDMVKKHHLSLDFSAYTLLVHGLCRANKCEWAYCLFEE 427

Query: 488 MIEEKCLKPGSSVYEMVLQQLR 509
           MI  K + P      ++L +++
Sbjct: 428 MI-GKDMTPKYQTCRLLLDEVK 448



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 148/316 (46%), Gaps = 7/316 (2%)

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEA 271
           Y  +P+  A+  ++ I+ + ++  + +   + ++      +      +R +  A      
Sbjct: 81  YKHSPE--AYDTMVDIMGKMKQMDQMEFLLEEMEKGQHVTLKTVGKAMRRFAGARQWENV 138

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            RVF ++   G++ N  + ++++D LC+  ++  A ++F + L+    PN+ TFN  +  
Sbjct: 139 LRVFDKLGTFGLEKNTESMNLLLDTLCKERKVELAREIFLD-LKSHISPNANTFNIFIHG 197

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K +R E+      +MK  GC    I+Y+ ++  +C         ++L+ M  +G  PN
Sbjct: 198 WCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVYELLDEMEAQGLIPN 257

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL-K 450
             T+  +   ++K  +   A ++  +MK + C+P+T+ YN L+     +   +  +++ +
Sbjct: 258 VVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPEEAIQVFE 317

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            EM    V PN +TY  +I M C       A   ++E+      KP    Y  +L+   +
Sbjct: 318 VEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEIEASIICKPDVQTYYPLLKSCFK 377

Query: 511 AGQLQKHEELVEKMVD 526
           AG +   + L+ +++D
Sbjct: 378 AGSI---DSLLSQLLD 390


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 195/388 (50%), Gaps = 5/388 (1%)

Query: 146 HSP--DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P  + ++ ++ L  +   FD AW   + +KS+ V +   +F I+++    AG   +  
Sbjct: 120 HVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGF 178

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
                +EE+G +P+ + ++ +I   C+      A++ F  + +    P+   Y+ L+ G+
Sbjct: 179 RLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGF 238

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G   E  +++  MK +GI PN Y Y+ +I   C  G + +A  VFAEM E G     
Sbjct: 239 FKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGV 298

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+N L+    +  +  + +++ +++ ++G   + +TYN LI+  C   K++ A+++ N 
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQ 358

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +   G +P   T+N +    SK+ ++ GA  +  +M++    P+ VTY IL+  FA    
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNH 418

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           T+   ++   ME++ + P+V TY +L+   C  G+   A K  + + E   L+P S +Y 
Sbjct: 419 TEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMH-LQPNSVIYN 477

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            ++    + G   +   L+ +MV  G  
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVQSGMV 505



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 160/345 (46%), Gaps = 1/345 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           +  +V  YV +    +A+   + M   G  P    F+ ++ +L R     +A   F+ LK
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
            K   D   +  +++G C AG   +  R+   ++  G+ PNV  Y+ +ID  C+ G +  
Sbjct: 152 SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVML 211

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A ++F +M  +G  PN  T++ LM    K     +  Q+Y  MKR G   +   YN LI 
Sbjct: 212 AKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            +C DG ++ A KV   M  KG      T+N++   + +      A ++  K+  +   P
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N VTYNIL+  F   +  D  ++L  +++ + + P + TY  LI  Y  + +   A   +
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +EM EE+C+ P    Y +++    R    +K  E+   M   G  
Sbjct: 392 KEM-EERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLV 435



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 174/373 (46%), Gaps = 4/373 (1%)

Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F  +    EF  SP+  +Y  +I+   K     LA +    M    +     T+S+L+  
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNG 237

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
           + + GL  E    +  M+  G  P+  A++ +IS  C      +A   F  +++K     
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACG 297

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           V+ Y  L+ G CR     EA ++  ++   G+ PN+ TY+I+I+  C   ++  A  +F 
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFN 357

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           ++   G  P  +T+N L+  + K       L +  +M+        +TY  LID   +  
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
             E A ++ + M + G  P+  T++++   +   G++  A +++  + ++  +PN+V YN
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            ++  +    S+   L+L  EM ++ + PNV ++   I + C    W  A   + +MI  
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINS 537

Query: 492 KCLKPGSSVYEMV 504
             LKP  S+Y+MV
Sbjct: 538 G-LKPSVSLYKMV 549



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 126/272 (46%), Gaps = 36/272 (13%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A+     M+ + +   V T++IL+    R     EAV   +++ + G +P+ + ++I+
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMK---- 279
           I+  C  R+   A   F+ LK     P ++ Y  L+ G+ +  N++ A  + +EM+    
Sbjct: 340 INGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399

Query: 280 -------------------------------MAGIQPNVYTYSIVIDALCRCGQITRAHD 308
                                           +G+ P+VYTYS+++  LC  G +  A  
Sbjct: 400 APSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASK 459

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F  + E+  +PNS+ +N ++  + K   + + L++ N+M + G   +  ++   I   C
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLC 519

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           +D K ++A  +L  M+  G  P+ S + M+ +
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 11/221 (4%)

Query: 106 SISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKV 161
            +SP+ V +  +I   C VR    +   +  FN + +      SP L  Y+ +I    KV
Sbjct: 328 GLSPNIVTYNILINGFCDVR---KMDSAVRLFNQLKSSGL---SPTLVTYNTLIAGYSKV 381

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
                A   +  M+ R +  +  T++IL+  + R     +A    + ME+ G  PD   +
Sbjct: 382 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTY 441

Query: 222 SIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           S+++  LC      EA   F SL +   +P+ ++Y  ++ G+C+ G+   A R+  EM  
Sbjct: 442 SVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQ 501

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           +G+ PNV ++   I  LCR  +   A  +  +M+  G +P+
Sbjct: 502 SGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 185/416 (44%), Gaps = 35/416 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           + +++    K++ +         M S  +   V T +IL+  +        A     ++ 
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 174

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD   F+ +I  LC + +  EA   FD ++ + F+PDV+ Y  L+ G C+ GN S
Sbjct: 175 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 234

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+ R M     +PNV  Y+ +ID+LC+  Q+T A ++F+EM+  G  P+  T+N+L+
Sbjct: 235 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 294

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                    + V  + N+M       + + ++ ++D  CK+G +  A  V++ M+++G  
Sbjct: 295 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  +        +++ A +++  M    C PN  +YNIL+  +   +  D  + L
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM--------------------- 488
            ++M    +  +  TY  LI   C +G   +A     EM                     
Sbjct: 415 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 474

Query: 489 -------------IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
                        IE   L     VY + +  + RAG+L+   +L   +  +GF A
Sbjct: 475 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 3/261 (1%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           QV   FN  +       SPD+  Y+ +I+    + ++      ++ M +  +   V  FS
Sbjct: 267 QVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFS 326

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            +V    + G+ A A    + M + G  PD + ++ ++   C +    EA   FD++  K
Sbjct: 327 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 386

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P+V  Y  L+ G+C+   + +A  +  +M + G+  +  TY+ +I  LC  G++  A
Sbjct: 387 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 446

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM+  G  P+ +T+  L+    K     + + +   ++    +AD + YN  ID 
Sbjct: 447 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 506

Query: 367 HCKDGKLEDAIKVLNSMVRKG 387
            C+ G+LE A  + +++  +G
Sbjct: 507 MCRAGELEAARDLFSNLSCQG 527


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 183/376 (48%), Gaps = 10/376 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PDL  Y  +++   K  + + +   +  + SR +      ++ ++    ++    EA+ 
Sbjct: 79  TPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALE 138

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
               M   GC P  I F+ +IS  CR++    A S   ++     + DV+ Y  L+ G C
Sbjct: 139 LLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLC 198

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG + EAE++   MK +G  P+V  YS  +  LC+ G++  AH V  +M +   +PN +
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVV 258

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRL-GCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           T+N ++    K+ + +  L++  QM    GC  + + Y+ ++D  CK G+ ++A  V+ +
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M R GC P+  T++ +   + K G +  A     +M    C+PN VTY  L+    +   
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 443 TDMVLKLKKEMEE-----NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                ++ +EM       +   P+V+TY  LI   C  G  ++A K+ + M  + C  P 
Sbjct: 379 LAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGC-DPD 437

Query: 498 SSVYEMVLQQLRRAGQ 513
              Y  +++ L R+G+
Sbjct: 438 GVSYSTIVEGLARSGR 453



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 173/348 (49%), Gaps = 5/348 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ LV  + + G   +       M   G  P+ ++++ ++  LC+  R  EA+     +
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 245 ---KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
                +  PD++ Y+ L+ G+C+AG + E+  + +E+   G++P+   Y+ V+ +LC+  
Sbjct: 72  ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSA 131

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A ++  EM+  GC P  ITFN L+    +    E    +   M   G +AD +TYN
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYN 191

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+D  CK G+L++A ++L  M   GC P+   ++     + K G V  AH++  +M+D 
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE-VEPNVNTYRILITMYCGMGHWNN 480
             +PN VTYN ++     S   D  L++ ++M  ++    NV  Y  ++   C +G    
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A   +  M    C +P    Y  ++  L +AG++++  E V +M   G
Sbjct: 312 ARSVMEAMARAGC-RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 182/387 (47%), Gaps = 10/387 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVRAGLAAEAVHAFNR 208
           Y+ ++    K+ ++  A   +  M SR    T D  T+S L+  Y +AG   E+      
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKE 107

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           +   G  PD + ++ V++ LC+  R  EA    + + +    P +I +  L+ G CR  N
Sbjct: 108 VISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN 167

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +  A+ + + M  +G++ +V TY+ ++D LC+ G++  A  +   M   GC P+ + +++
Sbjct: 168 LEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK- 386
            +    K+ +     QV  QM+    + + +TYN ++D  CK GK++ A++++  M    
Sbjct: 228 FVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC  N   ++ +   + KLG    A  +   M    C P+ VTY+ L+     +   +  
Sbjct: 288 GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM-----IEEKCLKPGSSVY 501
           ++  +EM     +PN  TY  L+   C  G    A + + EM       + C  P  S Y
Sbjct: 348 VEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHC-PPSVSTY 406

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
             ++  L +AG++    +  ++M  +G
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQG 433



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 9/202 (4%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEA 202
           H P++  Y+ +++   K  + D A   ++ M S +   + V  +S +V    + G   EA
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRG 261
                 M   GC PD + +S +++ LC+  +  EA ++  +   +  +P+ + Y +LV G
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372

Query: 262 WCRAGNISEAERVFREMKMAGIQ-----PNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            C  G ++EAER+  EM   G       P+V TY+ +I  LC+ G+I  A   F  M   
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432

Query: 317 GCEPNSITFNNLMRVHVKASRT 338
           GC+P+ ++++ ++    ++ R 
Sbjct: 433 GCDPDGVSYSTIVEGLARSGRA 454



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 115/251 (45%), Gaps = 3/251 (1%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   G  PN  T++ +++   + G+      +   M   G +PN +++N L+    K  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 338 TEKVLQVYNQMKRLGCEA--DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
             +  ++   M   G  +  D +TY+ L+  +CK GK+E++ ++L  ++ +G  P+A  +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             +   + K   +  A  +  +M    C P  +T+N L+      K+ +M   L + M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
           + V+ +V TY  L+   C  G    A + +  M    C  P    Y   +  L ++G++ 
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGC-APDVVAYSSFVYGLCKSGKVL 239

Query: 516 KHEELVEKMVD 526
              +++E+M D
Sbjct: 240 NAHQVLEQMRD 250



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 6/162 (3%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K+ +   A   ++ M        V T+S LV    +AG   EAV A   M 
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK------DKFEPDVIVYTNLVRGWCR 264
             GC P+ + +  ++  LC   R +EA+   + +       D   P V  Y  L+ G C+
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCK 415

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           AG I +A + F+ M+  G  P+  +YS +++ L R G+  +A
Sbjct: 416 AGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M    C PN+VT+N L+  F+         +L + M    ++PNV +Y  L+   C +  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 478 WNNAYKYIREMIEEKCLK-PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           W+ A + +R+MI       P    Y  +L    +AG++++  EL+++++ RG   RP
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGL--RP 115


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE-AQSFFDS 243
            F ++V+   R  L  +A+   N  + YG  P  ++++ ++  + R +++ + A+  F  
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 244 L-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + +    P+V  Y  L+RG+C AGN+      F EM+  G  PNV TY+ +IDA C+  +
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           I  A  +   M   G  PN I++N ++    +  + ++  ++  +M +     D +T+N 
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI+ +C  G    A+ +   MV+ G +PN  T+  +   + K G++N A     +M+D  
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             PN  TY  L+  F+         ++ KEM EN   P + TY  LI  +C +G   +A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             ++EMIE   + P    Y  ++    R  +L+K  +L  +MV +G +
Sbjct: 434 GLLQEMIERGFI-PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 182/382 (47%), Gaps = 4/382 (1%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++Y   I + G       ++   F   M+       V T++ ++  Y +     EA  
Sbjct: 200 SPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFK 259

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               M   G  P+ I++++VI+ LCR+ +  E     + + K ++ PD + +  L+ G+C
Sbjct: 260 LLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC 319

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             GN  +A  +  EM   G+ PNV TY+ +I+++C+ G + RA +   +M + G  PN  
Sbjct: 320 NVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGR 379

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+    +    ++  Q+  +M   G     ITYN LI+ HC  G++EDA  +L  M
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM 439

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + +G  P+  +++ I     +  ++  A ++  +M      P+  TY+ L+Q     +  
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
             V  L +EM    + P+  TY  LI  YC  G  + A +   EMI +K   P    Y +
Sbjct: 500 GEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI-QKGFSPDIVTYNV 558

Query: 504 VLQQLRRAGQLQKHEELVEKMV 525
           ++    +  + ++ + L+ K++
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLL 580



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 190/425 (44%), Gaps = 6/425 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ-FDL 166
           S S V  ++ KSC   + I   + LS  N   +   F+     Y+ +++   + +Q   +
Sbjct: 130 SSSAVFDLVVKSCARVNLIN--KALSIVNLAKSYG-FMPGVLSYNAILDAVIRTKQSVKI 186

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A      M    V   V T++IL+R +  AG     +  F  ME  GC P+ + ++ +I 
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+ R+  EA      +  K   P++I Y  ++ G CR G + E   +  EM      P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  T++ +I+  C  G   +A  + AEM++ G  PN +T+  L+    KA    + ++  
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM+  G   +  TY  LID   + G L+ A +++  MV  G  P   T+N +      L
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  +  +M +    P+ V+Y+ ++  F  ++  +   +LK EM    + P+V TY
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI   C            +EM+    L P    Y  ++      G L K   L ++M+
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLG-LPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 526 DRGFT 530
            +GF+
Sbjct: 546 QKGFS 550



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 167/333 (50%), Gaps = 11/333 (3%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTNL 258
           A+H   R + Y  A   +A  +V++ +         +  F  LK+ +   +    V+  +
Sbjct: 85  ALHILTRYKLYKTA-QSLAEEVVVNTV-----DETGEDLFQCLKNSYYQCKSSSAVFDLV 138

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR-AHDVFAEMLEVG 317
           V+   R   I++A  +    K  G  P V +Y+ ++DA+ R  Q  + A  +F EM+E G
Sbjct: 139 VKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESG 198

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN  T+N L+R    A   E  L  + +M+R GC  + +TYN +ID +CK  K+ +A 
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K+L  M  KG NPN  ++N++   + + G +     +  +M   +  P+ VT+N L+  +
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
               +    L L  EM +N + PNV TY  LI   C  G+ N A +++ +M  ++ L P 
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM-RDRGLHPN 377

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              Y  ++    + G L++  +++++MV+ GFT
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 188/395 (47%), Gaps = 17/395 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K+R+   A+  + LM  + +   + ++++++    R G   E       M 
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +    PD++ F+ +I+  C      +A     + +K+   P+V+ YT L+   C+AGN++
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A     +M+  G+ PN  TY+ +ID   + G + +A+ +  EM+E G  P  IT+N L+
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H    R E    +  +M   G   D ++Y+ +I   C++ +LE A ++   MV KG +
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ +T++ + + + K   +     ++ +M  L   P+ VTY  L+  +      D  L+L
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ--- 506
             EM +    P++ TY +LI  +        A + + +++ E+ + P    Y  ++    
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCN 599

Query: 507 --QLRRA----------GQLQKHEELVEKMVDRGF 529
             + + A          G + + + ++E M+ +G+
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGY 634



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 53/336 (15%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y  +IN   K    + A  F+D M+ R +     T++ L+  + + G   +A  
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M E G  P  I ++ +I+  C   R  +A      + ++ F PDV+ Y+ ++ G+C
Sbjct: 400 IMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC 459

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R   + +A ++  EM   GI P+V TYS +I  LC+  ++    D+F EML +G  P+ +
Sbjct: 460 RNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID------------------ 365
           T+ +L+  +      +K L+++++M + G   D +TYN LI+                  
Sbjct: 520 TYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579

Query: 366 ------------------CH--------------CKDGKLEDAIKVLNSMVRKGCNPNAS 393
                             C+              C  G + +A +VL SM++KG   N  
Sbjct: 580 LYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEE 639

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            +N+I    SK+G++  A+ +Y +M      P++VT
Sbjct: 640 VYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 22/268 (8%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I    K R+          M S  +     T++ L+  Y   G   +A+ 
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLV-- 259
             + M + G +PD + ++++I+   ++ R  EA+     LK  +E   P+ I Y  L+  
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLLYEESVPNEITYNTLIDN 597

Query: 260 -------------RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
                        +G+C  G ++EA+RV   M   G + N   Y+++I    + G I +A
Sbjct: 598 CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKA 657

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           ++++ EML  G  P+S+T   L +      +  ++ Q+ +   +     +      LI  
Sbjct: 658 YNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGI 717

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           + K+G ++    VL  M   G  P +S 
Sbjct: 718 NSKEGNMDAVFNVLKDMALSGLLPYSSA 745



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 21/292 (7%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+   + ++ + A+     M ++ +   V T+S L++   +     E    
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M   G  PD++ ++ +I+  C +    +A    D +  K F PD++ Y  L+ G+ +
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVID---------------ALCRCGQITRAHDV 309
                EA+R+  ++      PN  TY+ +ID                 C  G +  A  V
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              ML+ G + N   +N ++  H K    EK   +Y +M   G    ++T   L      
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYH 685

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           +GK  +  ++L+  ++      A+   ++    SK G+++    ++  +KD+
Sbjct: 686 EGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDA---VFNVLKDM 734


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 173/356 (48%), Gaps = 10/356 (2%)

Query: 180 EITVDTFSI--LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           E++ DTF+   ++  + R      A+  FN+M + GC P+ + +S +I+ LC   R +EA
Sbjct: 415 EMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEA 474

Query: 238 QSFFDSLKD----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
              FD +++       P     T  +   C  G   +A R+F +MK  G +PNVYTY+ +
Sbjct: 475 ---FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 531

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  LC  G +  A  +F  M   G  PN++T+N L+ + V+  R +    V N M R G 
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL 591

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             + +TYN +I  +C  G  + A+ V+N+M+++G + N  T+N I +     G+   A R
Sbjct: 592 FTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M+D  C+P+  +Y  L+  F      +    L  EM ++ + PN  TY  LI  YC
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                + A   +  M    C +P    Y +++  L +       EEL + M++ G 
Sbjct: 712 KDEKLDTATSLLEHMKRSGC-RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 766



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 175/366 (47%), Gaps = 2/366 (0%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           ++ AW     MK++  E  V T++ L+     +GL   A+  F+RM   G  P+ + ++ 
Sbjct: 506 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 565

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I+IL   RR   A    + + ++    +++ Y  +++G+C  G+  +A  V   M   G
Sbjct: 566 LINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 625

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
              N+ TY+ +I   C  G  T A  +   M + GC+P+  ++  L+    K S+ E   
Sbjct: 626 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 685

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            ++N+M   G   + +TY  LID +CKD KL+ A  +L  M R GC PN  T+N++   +
Sbjct: 686 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 745

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           +K  + +GA  +   M +    PN VTY  ++     + ST + L++  +M E    PN+
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  LI      G    A     E+ E   L P    Y  +++    +G+++     + 
Sbjct: 806 LTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864

Query: 523 KMVDRG 528
           +M+  G
Sbjct: 865 RMIKAG 870



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 172/385 (44%), Gaps = 4/385 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD +     + G  R+ DL  A    + M     E    T+S L+     +G   EA  
Sbjct: 417 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 476

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M  +G  P     +  I  LC      +A   F  +K+K  EP+V  YT L+ G C
Sbjct: 477 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 536

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +G +  A  +F  M   G+ PN  TY+ +I+ L    +I  A  V   M   G   N +
Sbjct: 537 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIV 596

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N +++ +      +K + V N M + G  A+ +TYN +I  +C  G    A+++L+ M
Sbjct: 597 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 656

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC P+  ++  +     K+  +  A  ++ +M D    PN VTY  L+  +   +  
Sbjct: 657 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 716

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D    L + M+ +   PNV TY +LI       +++ A +  + MIEE  + P    Y  
Sbjct: 717 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYTA 775

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L + G      E+  KM+++G
Sbjct: 776 MIDGLCKNGSTSLALEMFNKMIEQG 800



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 1/242 (0%)

Query: 231 KRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           K   +   SF D L +      +  Y+ L+    R G  +     +  M   G+QPN+  
Sbjct: 328 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 387

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ VI+ALC+ G +  A  +  ++ E    P++ T+ +++  H +    +  LQV+NQM 
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 447

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + GCE +T+TY+ LI+  C  G++ +A  ++  M+  G  P A T       +  +G   
Sbjct: 448 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 507

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A R++  MK+  CEPN  TY  L+     S    + + L   M  + V PN  TY  LI
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567

Query: 470 TM 471
            +
Sbjct: 568 NI 569



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 185/438 (42%), Gaps = 32/438 (7%)

Query: 101  ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
            +   HS +  T   +I+  C   +    L++L        +P+       Y E+I    K
Sbjct: 622  LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS----YTELICGFCK 677

Query: 161  VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
            + + + A+   + M    +     T++ L+  Y +      A      M+  GC P+   
Sbjct: 678  ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 737

Query: 221  FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
            ++++I  L ++   S A+     + ++   P+V+ YT ++ G C+ G+ S A  +F +M 
Sbjct: 738  YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 797

Query: 280  MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
              G  PN+ TYS +I AL + G++  A ++FAE+   G  P+ IT+  ++  ++ + + E
Sbjct: 798  EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 857

Query: 340  KVLQVYNQMKRLGCEADTITYNFLIDC--------------------HCKDGKL---EDA 376
                   +M + GC+    TY  LI                      +C  G     +DA
Sbjct: 858  HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDA 917

Query: 377  IKVLNSMVRKGCNPNASTF--NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            + V+++ + +  +P  S    N +   +S  G    A+ + G M      P+   YN L+
Sbjct: 918  VSVMSAKLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL 976

Query: 435  QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                  ++ D+ + + K M     E ++N Y+ LI   C + H     +   E +  +  
Sbjct: 977  CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL-HRRKEARITFENMLMRTW 1035

Query: 495  KPGSSVYEMVLQQLRRAG 512
             P   V  +++  L R G
Sbjct: 1036 NPDDVVQAVLIDGLLRDG 1053



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 25/343 (7%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +I+   K   F  A     +M    +   V T++ ++    + G  + A+  FN+M 
Sbjct: 738  YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 797

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            E GC P+ + +S +I  L ++ +  EA++ F  L +    PD I Y  ++  +  +G + 
Sbjct: 798  EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 857

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDAL--------------------CRCGQITRAHDV 309
             A      M  AG QP ++TY ++I  L                    C  G  T   D 
Sbjct: 858  HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDA 917

Query: 310  F----AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
                 A++ E+    +    N L+     A R  +  ++   M   G   D   YN L+ 
Sbjct: 918  VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 977

Query: 366  CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
               +   ++ A+ V   M  +GC  + + +  +   + +L     A   +  M      P
Sbjct: 978  SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 1037

Query: 426  NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
            + V   +L+         D+ ++    ME     P+ + Y IL
Sbjct: 1038 DDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 95/245 (38%), Gaps = 25/245 (10%)

Query: 185  TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS------ILCRKRRAS--- 235
            T+  ++  Y+ +G    A +   RM + GC P    + ++I       +L  +R A+   
Sbjct: 842  TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 901

Query: 236  --------------EAQSFFDSLKDKFEP--DVIVYTNLVRGWCRAGNISEAERVFREMK 279
                          +A S   +   + +P   V V   LV     AG   EA  +   M 
Sbjct: 902  VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 961

Query: 280  MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
              G+ P+   Y+ ++ +L R   +  A  VF  M   GCE +   +  L+    +  R +
Sbjct: 962  SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 1021

Query: 340  KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
            +    +  M       D +    LID   +DG  +  ++ L+ M  +   P+   + ++ 
Sbjct: 1022 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 1081

Query: 400  RCISK 404
            R  SK
Sbjct: 1082 REASK 1086


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 3/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T +  VRR   AG    A+    R  + G  A D  A + +++  C+    +EA+  FD 
Sbjct: 4   TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +      P+ + YT L+ G+   G   +   +F EM+  G++PN+YTY+ +I   CR G+
Sbjct: 64  MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGE 123

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
             RA  +F EM   G   N +++N L+    +  +     ++ + M+  G     IT+N 
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNL 183

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+D + K GK+ +A+   N M   G  P+A T+NM+     +  D+  A+R    MK+  
Sbjct: 184 LVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            EP  VTY IL+  FA         ++   ME+  +E + +TY +L+   C  G+  +A 
Sbjct: 244 LEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDAR 303

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           K  + M  EK ++P + +Y+M++    R G   K  +L+ +M  +G 
Sbjct: 304 KLFQSM-GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGL 349



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 166/351 (47%), Gaps = 2/351 (0%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           KS +  + V   + LV    + G  AEA   F+ M   G AP+++ ++ ++       + 
Sbjct: 30  KSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQR 89

Query: 235 SEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            +  + F+ ++    EP++  Y  L+  WCR G    A  +F EM + GI  NV +Y+ +
Sbjct: 90  EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTL 149

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  LCR G++  A  +   M   G  P+ ITFN L+  + KA +    L  +NQMK  G 
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           +   +TYN LI   C+   +  A + L+ M  +G  P   T+ ++    ++   +  A  
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M+    E +  TY +L++      +     KL + M E  VEP+   Y ++I  Y 
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             G    A K I EM  +K L P S+ Y + ++ L +  + Q+ E L++ M
Sbjct: 330 REGSSYKALKLIMEM-RQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 143/293 (48%), Gaps = 1/293 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q +  +   + M+   VE  + T++ L+  + R G    A   F+ M   G   + ++++
Sbjct: 88  QREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYN 147

Query: 223 IVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I+ LCR  +  +A    D ++ +   P +I +  LV G+ +AG +S A   F +MK A
Sbjct: 148 TLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAA 207

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G QP+  TY+++I   CR   +TRA+   ++M E G EP  +T+  L+    + +   K 
Sbjct: 208 GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA 267

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            ++   M++ G E D  TY  L+   C +G ++DA K+  SM  KG  P+   ++M+   
Sbjct: 268 FEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYG 327

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
             + G    A ++  +M+     PN+ +Y + +++            L  +ME
Sbjct: 328 YGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 130/260 (50%), Gaps = 3/260 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+LY  + +I    +  +F+ A    D M  R +   V +++ L+    R G   +A   
Sbjct: 106 PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKL 165

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            + M   G  P  I F++++    +  + S A  FF+ +K   F+P  + Y  L+ G+CR
Sbjct: 166 LDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCR 225

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           A +++ A R   +MK  G++P   TY+I+ID+  R   + +A ++ A M + G E ++ T
Sbjct: 226 ARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHT 285

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+R        +   +++  M   G E   + Y+ +I  + ++G    A+K++  M 
Sbjct: 286 YGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMR 345

Query: 385 RKGCNPNASTFNMIFRCISK 404
           +KG  PN++++ +  R + K
Sbjct: 346 QKGLIPNSASYGLTIRVLCK 365



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 2/184 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FFN + A   F  S   Y+ +I    + R    A   +  MK R +E T  T++IL+
Sbjct: 197 ALPFFNQMKA-AGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FE 249
             + R     +A      ME+ G   D   + +++  LC +    +A+  F S+ +K  E
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P  ++Y  ++ G+ R G+  +A ++  EM+  G+ PN  +Y + I  LC+  +   A  +
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEAL 375

Query: 310 FAEM 313
             +M
Sbjct: 376 LDDM 379


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 183/422 (43%), Gaps = 52/422 (12%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K R+   AW   D M  R +  +V T++ L+      G  A+A   +++M      P+ +
Sbjct: 163 KARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVV 222

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++ +I  LC +    +A+  FD++K+   +P+   Y  L+ G C+  +++ A  +++E+
Sbjct: 223 TYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQEL 282

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
             +G+ PN   ++ +ID  C+  + + A  +F EM   G  P    +N+LM    ++   
Sbjct: 283 LKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNA 342

Query: 339 EKVLQVYNQMKRLGCEADTIT-----------------------------------YNFL 363
           ++ L +Y +M RLG   D  T                                   YN L
Sbjct: 343 QEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNAL 402

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +C+ G LE+A+     M   G  PN  +++ +    SK G +  A  +Y +M     
Sbjct: 403 IDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGI 462

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           EPN VTY  L+   A +   D   +L KEM EN + PN  T  +L+   C       A +
Sbjct: 463 EPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVR 522

Query: 484 YIRE----------------MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++ E                 IEE+CL P S +Y  ++  L   GQ  +  +L   M   
Sbjct: 523 FVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKS 582

Query: 528 GF 529
           G 
Sbjct: 583 GM 584



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 153/346 (44%), Gaps = 5/346 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
              +LV    + GL  EA++ F R+      P   A + V+  L + RR   A   FD  
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRRLRTLPALP---ACNAVLDGLVKARRPGCAWELFDEM 177

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L+    P V+ Y  L+      G +++A+ V+ +M    I PNV TY+ +I ALC  G I
Sbjct: 178 LRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCI 237

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  M E G +PN  T+N LM  H +       + +Y ++ + G   + + +  L
Sbjct: 238 GDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTL 297

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK  +  +A  +   M R G  P    +N +     + G+   A  +Y +M  L  
Sbjct: 298 IDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGL 357

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  T +I+++         +  +  + ++E+ V  N   Y  LI  YC +G+   A  
Sbjct: 358 CPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALA 417

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               M E   ++P    Y  ++    + G++Q    +  +MV +G 
Sbjct: 418 TCTRMTEVG-IEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGI 462



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 18/189 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  +  +A      M ++ +E  V T++ L+  + + G    A      M 
Sbjct: 434 YSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMI 493

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSF---FDSLK---------------DKFEPDV 252
           E G +P+ I  S+++  LCR+ R  EA  F   +  LK               +   P+ 
Sbjct: 494 ENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNS 553

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           ++Y  L+ G    G   EA ++F  M+ +G+ P+ +TY+++I   C  G +  A  ++A+
Sbjct: 554 VIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYAD 613

Query: 313 MLEVGCEPN 321
           M+++G +P 
Sbjct: 614 MMKIGVKPT 622



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 53/243 (21%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q  +A  F+  ++   V +    ++ L+  Y R G   EA+    RM E G  P+ +++S
Sbjct: 376 QMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYS 435

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I    ++ +   A + +  +  K  EP+V+ YT L+ G  + G I  A R+ +EM   
Sbjct: 436 SLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIEN 495

Query: 282 GIQPNVYTYSIVIDALC------------------RC----------------------- 300
           GI PN  T S+++D LC                  +C                       
Sbjct: 496 GISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVI 555

Query: 301 -----------GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
                      GQ   A  +F+ M + G  P+S T+  L+R           + +Y  M 
Sbjct: 556 YMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMM 615

Query: 350 RLG 352
           ++G
Sbjct: 616 KIG 618


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 200/410 (48%), Gaps = 10/410 (2%)

Query: 131 VLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           V+S FN +        +PDL  Y  +I    ++ + +  +    L+      +     + 
Sbjct: 75  VVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQ 134

Query: 189 LVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF----DS 243
           L++    A    EA+     RM E GC PD ++++ ++   C ++RA EA        DS
Sbjct: 135 LLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADS 194

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                 P+V+ Y  ++ G+   G + +A  +F EM   GIQPNV TY+ VID LC+   +
Sbjct: 195 QGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVV 254

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            RA  VF +M++ G +P++ T+N L+  ++   + ++V+++  +M   G + D  TY  L
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++  C +G+  +A    +SM+RKG  PN + + ++    +  G ++  H +   M +   
Sbjct: 315 LNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+   +NI+   +A     D  + +  +M++  + P+V  +  LI   C +G  ++A  
Sbjct: 375 SPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVL 434

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
              +M+ E  + P   V+  ++  L    + +K +E   +M+++G   RP
Sbjct: 435 KFNQMMNEG-VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI--RP 481



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 170/362 (46%), Gaps = 2/362 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            ++LM    +      F+I+   Y +  +  EA+H FN+M++ G +PD + F  +I  LC
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALC 424

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  R  +A   F+ + ++   P++ V+ +LV G C      +A+  + EM   GI+P+V 
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            ++ ++  LC  GQ+ +A  +   M  VG  P+ I++  L+  H    R ++  +  + M
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVM 544

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             +G + D  TYN L+  +C+ G+++DA  V   M+R G  P   T++ I   +      
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRF 604

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +Y  M     + N   YNI++   + +   D   KL + +   + +  + T+ I+
Sbjct: 605 SEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I      G  N    ++   I    L P    Y ++ + L   G L++ ++L   M   G
Sbjct: 665 IGALFKSGR-NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723

Query: 529 FT 530
            T
Sbjct: 724 TT 725



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 168/381 (44%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN      Q D A++    M  R ++  V T++ ++    +A +   A   F +M 
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   ++ +I       +  E     + +     +PD   Y +L+   C  G   
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA   F  M   GI+PNV  Y I+I      G ++  HD+   M+E G  P+   FN + 
Sbjct: 326 EARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K +  ++ + ++N+MK+ G   D + +  LID  CK G+++DA+   N M+ +G  
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN   FN +   +  +     A   Y +M +    P+ V +N ++    T        +L
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              ME     P+V +Y  LI  +C +G  + A K +  M+    LKP    Y  +L    
Sbjct: 506 IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG-LKPDEWTYNTLLHGYC 564

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           RAG++     +  +M+  G T
Sbjct: 565 RAGRIDDAYGVFREMLRNGIT 585



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 180/391 (46%), Gaps = 12/391 (3%)

Query: 147 SPDLYHEMINLA----GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           SPD  H + N+      K    D A H  + MK + +   V  F  L+    + G   +A
Sbjct: 375 SPD--HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDA 432

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDSLKDKFEPDVIVYTNLVRG 261
           V  FN+M   G AP+   F+ ++  LC   +  +A+ F F+ L     PDV+ +  ++  
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C  G + +A+R+   M+  G +P+V +Y+ +I   C  G+I  A      ML VG +P+
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+N L+  + +A R +    V+ +M R G     +TY+ ++       +  +A ++  
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM--KDLKCEPNTVTYNILMQMFAT 439
           +M+  G   N   +N+I   +SK   V+ A +++  +  KD + E    T+NI++     
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE--ITTFNIMIGALFK 670

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           S   +  + L   +    + P+V TY ++       G+    +  +   +E+    P S 
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE-FDDLFSAMEKSGTTPNSR 729

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +   ++++L   G + +    + K+ ++ F+
Sbjct: 730 MLNALVRRLLHRGDITRAGAYLSKLDEKNFS 760


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 185/377 (49%), Gaps = 6/377 (1%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
            Q+L     +   P  V    +Y  +I+   K    + A  F D M    +     TF++
Sbjct: 182 FQLLGLLQDMGLSPNVV----IYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTV 237

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           L+    + GL  +    F +M+  G  P+   ++ +++  C + +   A   FD ++++ 
Sbjct: 238 LINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERG 297

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            E +V+ Y  L+ G CR   + EAE++  +MK A + PN+ TY+ +I   C  G + +A 
Sbjct: 298 VEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKAS 357

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +  ++   G  P+ +T+N L+  + KA   + V  +  +M+  G     +T   LID +
Sbjct: 358 SLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAY 417

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
            +  ++E A ++ +SM + G  P+   + ++   +   G++  + +++  M ++  EP+ 
Sbjct: 418 VRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSD 477

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           V YN ++  +    ++   L+L +EME   + PNV +Y  +I + C  G W  A   + +
Sbjct: 478 VIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDK 537

Query: 488 MIEEKCLKPGSSVYEMV 504
           MIE + LKP +S+  M+
Sbjct: 538 MIELQ-LKPSASILNMI 553



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 204/444 (45%), Gaps = 38/444 (8%)

Query: 93  SLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIP-----LLQVLSFFNWVTARPEFVHS 147
           S+  GF    T HSIS   ++H+++      H +P     +LQ+LS  N +++   F   
Sbjct: 28  SIQQGFQH--THHSIS-FLLQHLLD-----HHKLPHAQSLILQILS--NKISS--PFFTV 75

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT-FSILVRRYVRAGLAAEAVHAF 206
           P L H                    L +++N  +T    +  ++  ++++ L  +A+  F
Sbjct: 76  PSLLHH-------------------LTQNQNPSMTTALLYESIINAHLKSQLLDKALIFF 116

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
           N M + G       F+ ++  L R     +A  FF+ LK++ + DV  +  +++G C  G
Sbjct: 117 NEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENG 176

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
           N+ ++ ++   ++  G+ PNV  Y+ +ID  C+ G I RA   F +M E+G   N  TF 
Sbjct: 177 NLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFT 236

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    K    +    ++ +MK  G   +  TYN L++ +C +GK+  A  + + M  +
Sbjct: 237 VLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRER 296

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N  T+N +   + +   V  A ++  +MK     PN +TYN L+  F    + D  
Sbjct: 297 GVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKA 356

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             L  +++ N + P++ TY ILI  Y   G+W       REM E + + P      +++ 
Sbjct: 357 SSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREM-EGRGISPSKVTCTVLID 415

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
              R  +++K  ++   M   G  
Sbjct: 416 AYVRLQEMEKAFQIYSSMEKFGLV 439


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 205/416 (49%), Gaps = 16/416 (3%)

Query: 103 TAHSISPS--TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLA 158
              +I PS  T   VI++ C       +   LS    +  R    + PD+  +  +IN  
Sbjct: 366 AGRNIQPSSGTCHSVIQELCKAGR---VDSALSLLETMIKRG---YCPDMATHSMLINEL 419

Query: 159 GKVRQFDLAWHFIDLM--KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYGCA 215
            K  +   A  F+  M  K  +   +  +++ L+    +A    +A   F+ M  E    
Sbjct: 420 CKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV 479

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           PD +++SI+I   C+      A+  +  + D    P+V  Y   + G  R G I++A+ V
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           + EM  AG  P+V TYS +I       +  +AH++F  M+  GC PN++T+N L+    K
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCK 599

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
            S+ ++  +++ +M   GC+ D +TY  L+   C  GK+E A++V + MV KG +P+   
Sbjct: 600 ESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 659

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N + +   + G    A +++  M   +C+P+TV++NI++   + +K  D  +++ + ME
Sbjct: 660 YNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 719

Query: 455 ENE-VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
           ++    P++ TY  LI   CG    + A K  +E+   K L P    + ++L+ ++
Sbjct: 720 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLK-LSPDPHAFNVLLEAIK 774



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 183/390 (46%), Gaps = 5/390 (1%)

Query: 139 TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           T +     S  +Y  +I L  +  + D A      +  RN++ +  T   +++   +AG 
Sbjct: 330 TMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGR 389

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVY 255
              A+     M + G  PD    S++I+ LC+  +  EAQ F   +  K          Y
Sbjct: 390 VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSY 449

Query: 256 TNLVRGWCRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
            +L+   C+A  + +A  +F  M       P+V +YSI+ID  C+  ++ RA  ++ +M+
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           ++ C PN  T+N  +   ++  R      VY +M   GC  D ITY+ LI       K +
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A ++  +M+ +GC PNA T+N +   + K    + AH ++ KM +  C+P+ VTY  L+
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
             F      +  +++  EM     +P+V  Y  L+  +   G    A +  + M+  +C 
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC- 688

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           KP +  + +++  L +A +L    E+ E+M
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 204/505 (40%), Gaps = 87/505 (17%)

Query: 103 TAHSISPS--TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYH---EMINL 157
            A  + P+  T   +++ SC  R+     + + FF  +  +  F  S  LY    E +  
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSD---EAVRFFGEMVDKG-FKPSSTLYQKVTECLKA 211

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
            GK  +F   +   DL K   VE+ +     L+  +V    A EA   F  M + GC PD
Sbjct: 212 TGKEGEFSRVFGR-DLEKRVAVEMMLK--KALLVNFVIQDKAIEASKLFRAMVKSGCKPD 268

Query: 218 KIAFSIVISILCRKRRASEAQSFF--DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
              +S ++   C+     EA   F   +++ K   + + +T  + G C++G I +A    
Sbjct: 269 ATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEAC 328

Query: 276 REMK--------------------------------MAG--IQPNVYTYSIVIDALCRCG 301
           R M+                                +AG  IQP+  T   VI  LC+ G
Sbjct: 329 RTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAG 388

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV----------------- 344
           ++  A  +   M++ G  P+  T + L+    KA + ++  +                  
Sbjct: 389 RVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFS 448

Query: 345 YNQMKRLGCEA---------------------DTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           YN +    C+A                     D ++Y+ LID  CK  +L  A K+   M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +   C PN +T+N     + + G +  A  +Y +M    C P+ +TY+ L+  F+ ++  
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   +L + M      PN  TY  L+   C     + A++  R+M+E  C  P    Y  
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC-DPDRVTYTT 627

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           +L      G++++  E+ ++MV +G
Sbjct: 628 LLYGFCNVGKIEQAVEVFDEMVSKG 652



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 189/439 (43%), Gaps = 43/439 (9%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L+FF W+ AR  F H    Y+ +++   + R    A    + M ++ V     T+++L
Sbjct: 112 EALTFFRWLQAR-NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVL 170

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS--------------------------I 223
           V+       + EAV  F  M + G  P    +                           +
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230

Query: 224 VISILCRKR---------RASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAER 273
            + ++ +K          +A EA   F ++ K   +PD  +Y+ +V   C+  N+ EA +
Sbjct: 231 AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 274 VFREMKMAGIQP-NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +F EM +    P N   ++  +  LC+ G+I +A +    M E     +   ++ L+R+ 
Sbjct: 291 LFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLL 349

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           +++ R +K  +   ++     +  + T + +I   CK G+++ A+ +L +M+++G  P+ 
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKM--KDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           +T +M+   + K   +  A      M  K      +  +YN L+     +K       + 
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469

Query: 451 KEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             M  E    P+V +Y ILI  +C +     A K  ++MI+  C+ P  + Y   L  L 
Sbjct: 470 STMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV-PNVTTYNAFLNGLM 528

Query: 510 RAGQLQKHEELVEKMVDRG 528
           R G++   + + E+MV  G
Sbjct: 529 RKGRIADAQGVYEEMVAAG 547



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 148/305 (48%), Gaps = 14/305 (4%)

Query: 232 RRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           R   EA +FF  L+ + F+ DV  Y  L+    R  ++ +A +VF +M   G+ PN +TY
Sbjct: 108 RDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTY 167

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ--M 348
           ++++ + C       A   F EM++ G +P+S  +  +        +  +  +V+ +   
Sbjct: 168 AVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLE 227

Query: 349 KRLGCE---ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           KR+  E      +  NF+I    +D  +E A K+  +MV+ GC P+A+ ++ +     KL
Sbjct: 228 KRVAVEMMLKKALLVNFVI----QDKAIE-ASKLFRAMVKSGCKPDATIYSYMVLAHCKL 282

Query: 406 GDVNGAHRMYGKMK-DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            +++ A +++ +M  + K   N V +   +     S   +   +  + M+E+ +  +   
Sbjct: 283 ENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPV 341

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y +LI +    G  + A +   E I  + ++P S     V+Q+L +AG++     L+E M
Sbjct: 342 YDMLIRLLIESGRIDKAEEACLE-IAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETM 400

Query: 525 VDRGF 529
           + RG+
Sbjct: 401 IKRGY 405



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/228 (19%), Positives = 97/228 (42%), Gaps = 13/228 (5%)

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           HDVF             T+N L+   ++    ++  QV+ +M   G   +  TY  L+  
Sbjct: 127 HDVF-------------TYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQS 173

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C +   ++A++    MV KG  P+++ +  +  C+   G      R++G+  + +    
Sbjct: 174 SCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVE 233

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            +    L+  F          KL + M ++  +P+   Y  ++  +C + + + A+K   
Sbjct: 234 MMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFL 293

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           EM  E      +  +   L  L ++G++++  E    M +   +++P+
Sbjct: 294 EMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPV 341


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 52/424 (12%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K R+   AW   D M  R +  +V T++ L+      G  A+A   +++M      P+ I
Sbjct: 155 KARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVI 214

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++ +I +LC +    +A+  FD++K+    P+   Y  L+ G C+  +++ A  +++E+
Sbjct: 215 TYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQEL 274

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
             +G+ PN   ++ +ID  C+  + + A D+F +M   G  P    +N+LM    ++   
Sbjct: 275 LNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDA 334

Query: 339 EKVLQVYNQMKRLG---------------CEADTI--------------------TYNFL 363
           ++ L +Y +M RLG               C+   I                     YN L
Sbjct: 335 QEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNAL 394

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +C++G LE+A+     M   G  PN  +++ +    SKLG +  A  +Y +M     
Sbjct: 395 IDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGI 454

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           EPN VTY  L+   A +   D   +  KEM EN + PN  T  +L+   C      +A +
Sbjct: 455 EPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVR 514

Query: 484 YIRE----------------MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           ++ E                  EE+ L P S++Y  ++  L   GQ  +  +L   M   
Sbjct: 515 FVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKS 574

Query: 528 GFTA 531
           G  +
Sbjct: 575 GMIS 578



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 148/346 (42%), Gaps = 5/346 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
              +LV    + GL  EA++ F R+      P   A + V+  L + RR+  A   FD  
Sbjct: 113 ALGVLVIALSQMGLLDEALYVFRRLWTLPALP---ACNAVLDGLVKARRSRCAWELFDEM 169

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L+    P V+ Y  L+      G +++A+ ++ +M    I PNV TY+ +I  LC  G I
Sbjct: 170 LRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCI 229

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F  M E G  PN  T+N LM  H +         +Y ++   G   + + +  L
Sbjct: 230 GDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTL 289

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK  +  +A  +   M R G  P    +N +     + GD   A  +Y +M  L  
Sbjct: 290 IDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGL 349

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  T +I+++         +  +  + + E+ V  N   Y  LI  YC  G+   A  
Sbjct: 350 CPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALA 409

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               M E   ++P    Y  ++    + G++Q    +  +MV +G 
Sbjct: 410 TCTRMTEVG-VEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGI 454



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 18/188 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K+ +  +A      M ++ +E  V T++ L+  + + G    A      M 
Sbjct: 426 YSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMI 485

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA---------------QSFFDSLKDKFEPDV--- 252
           E G +P+ I  S+++  LCR+ R  +A                SFF +   + EP +   
Sbjct: 486 ENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNS 545

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
            +Y  L+ G    G   EA ++F  M+ +G+  + +TY+++I   C  G +  A  ++A+
Sbjct: 546 AIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYAD 605

Query: 313 MLEVGCEP 320
           M+++G +P
Sbjct: 606 MMKIGVKP 613


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 171/349 (48%), Gaps = 4/349 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T++ ++  +   G     +     M E G  APDK  ++ VIS  C+  +  +A   FD 
Sbjct: 149 TYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDE 208

Query: 244 L--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           +  + K EP+ ++Y  L+ G+C  GN+  A R   EM   G+   V TY++ +  L   G
Sbjct: 209 MLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEG 268

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   AH +  EM E G  P++ T+N L+  + K  + +K ++++  M   G  A  +TY 
Sbjct: 269 RAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYT 328

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI      G +++  ++ N  VR+G  P+   +N +       GD++ A  + G+M+  
Sbjct: 329 SLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKK 388

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +  P+ VTYN LM+        D    L +EM +  ++P++ +Y  LI+ Y   G   +A
Sbjct: 389 RITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDA 448

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            K +R+ +  K   P    Y  +++ L   GQ    E+LV++MV  G T
Sbjct: 449 VK-VRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGIT 496



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 145/291 (49%), Gaps = 1/291 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I         ++A  +   M  R V +TV T+++ V      G AAEA      M
Sbjct: 221 MYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEM 280

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            E G APD   ++I+I+  C++ +  +A   F+ +  K     V+ YT+L+      G +
Sbjct: 281 GEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMV 340

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            E +R+F +    GI+P+++ Y+ +I++ C  G + RA ++  EM +    P+ +T+N L
Sbjct: 341 QETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTL 400

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           MR      R ++   +  +M + G + D ++YN LI  +   G ++DA+KV + M+ KG 
Sbjct: 401 MRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGF 460

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           NP   T+N + + +   G    A  +  +M      P+  TY  L++   T
Sbjct: 461 NPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTT 511



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 6/311 (1%)

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK- 279
           F+I++  LC   +   A    + L+    P+ + Y  ++ G+C  G +     + REM+ 
Sbjct: 119 FNIMLRHLCTAGKPVRA---LELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRE 175

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRT 338
             GI P+ YTY+ VI   C+ G++  A  VF EML  G  EPN++ +N L+  +      
Sbjct: 176 RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL 235

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           E  L+   +M   G      TYN  +     +G+  +A  ++  M  KG  P+A T+N++
Sbjct: 236 EVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNIL 295

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                K G    A +M+  M         VTY  L+   +         +L  +     +
Sbjct: 296 INGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGI 355

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P++  Y  LI  +C  G  + A++ + EM E+K + P    Y  +++ L   G+L +  
Sbjct: 356 RPDLFMYNALINSHCTGGDMDRAFEIMGEM-EKKRITPDDVTYNTLMRGLCLLGRLDEAR 414

Query: 519 ELVEKMVDRGF 529
            L+E+M  RG 
Sbjct: 415 GLIEEMTKRGI 425



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 151/327 (46%), Gaps = 4/327 (1%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEAV 203
           +PD Y     ++G  KV + + A    D M +   VE     ++ L+  Y   G    A+
Sbjct: 180 APDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVAL 239

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                M + G +     +++ +  L  + RA+EA +  + + +K   PD   Y  L+ G+
Sbjct: 240 RYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGY 299

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ G   +A ++F  M   GI+  V TY+ +I AL   G +     +F + +  G  P+ 
Sbjct: 300 CKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDL 359

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             +N L+  H      ++  ++  +M++     D +TYN L+   C  G+L++A  ++  
Sbjct: 360 FMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEE 419

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M ++G  P+  ++N +    S  GD+  A ++  +M      P  +TYN +++    +  
Sbjct: 420 MTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQ 479

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILI 469
                 L KEM  N + P+ +TY  LI
Sbjct: 480 GGDAEDLVKEMVGNGITPDDSTYISLI 506



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +FA++  +    ++ TFN ++R    A +  + L++  QM       + +TYN +I   C
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFC 158

Query: 369 KDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPN 426
             G+++  I+++  M  R G  P+  T+  +     K+G V  A +++ +M  + K EPN
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPN 218

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            V YN L+  +    + ++ L+ + EM +  V   V TY + +      G    A+  + 
Sbjct: 219 AVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVE 278

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           EM  EK L P +  Y +++    + G+ +K  ++ E MV +G  A
Sbjct: 279 EM-GEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRA 322


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 129 LQVLSFFNWVTARP--EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           L+ +  FN +  R     VH+   Y  M++   K R+ D +   ++ M  + +  +V T+
Sbjct: 336 LEGMDLFNEMRERSCEPNVHT---YTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTY 392

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LK 245
           + L+R Y   G    A+     ME   C P++  ++ +I    +++   +A +     L+
Sbjct: 393 NALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLE 452

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
            K  P ++ Y +L+   C+AG+   A ++   +K  G+ P+ +TYS+ ID LC+  ++  
Sbjct: 453 SKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEE 512

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A D+F  + E G + N + +  L+  H KA + ++ + +  +M    C  ++ TYN LI 
Sbjct: 513 ACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIY 572

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK+GK+++ + ++ +M + G  P  +T+ ++   + + GD + A+R++ +M     +P
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  TY   +  + TS +      +   M E  V P+  TY +LI+ Y  +G   +A+  +
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692

Query: 486 REMIEEKC 493
           + M++  C
Sbjct: 693 KRMLDAGC 700



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 178/353 (50%), Gaps = 2/353 (0%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           +++V +++ L+    R  +  E    +  M      P+    + +++   +     EA  
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL 235

Query: 240 FFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           +   + +    PD   YT+L+ G+CR  +++ A +VF  M   G + N  +Y+ +I  LC
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
             G+I     +F +M E  C P   T+  ++       R  + + ++N+M+   CE +  
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  ++D  CK+ KL+++ ++LN M+ KG  P+  T+N + R   + G +  A  + G M
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           +   C PN  TYN L+  F+  K     + L  +M E+++ P++ TY  LI + C  GH+
Sbjct: 416 ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHF 475

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++AYK + ++++E  L P    Y + +  L ++ ++++  +L   + ++G  A
Sbjct: 476 DSAYKLL-DLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKA 527



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 219/482 (45%), Gaps = 21/482 (4%)

Query: 63  FHSLIKDHHRKNPNPSSNSNPSLNPDF------TIPSLSLGFSQISTAHS-----ISPST 111
           F  LI +    + +   N++P LNP+       ++P +  GF     +HS     + P+ 
Sbjct: 75  FQKLIPNLSPSHVSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNN 134

Query: 112 VRHVIEK-------SCGVRHGIP-LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ 163
           +  V EK       +C     I  LL  L   N      +F  S   Y+E++ +  +   
Sbjct: 135 LFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLM 194

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            D        M +  +   + T + +V  Y + G   EA    +++ + G +PD   ++ 
Sbjct: 195 IDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTS 254

Query: 224 VISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I   CR    + A   F+ + +K    + + YT ++ G C AG I E   +F++M+   
Sbjct: 255 LILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P V TY+++I AL    +     D+F EM E  CEPN  T+  ++    K  + ++  
Sbjct: 315 CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESR 374

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           ++ N+M   G     +TYN LI  +C++G++E A+++L  M    C PN  T+N +    
Sbjct: 375 RILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGF 434

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           SK   V+ A  +  KM + K  P+ VTYN L+ +   +   D   KL   ++EN + P+ 
Sbjct: 435 SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQ 494

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY + I   C       A      + +EK +K    +Y  ++    +AG++ +   L+E
Sbjct: 495 WTYSVFIDTLCKSKRMEEACDLFNSL-KEKGIKANEVMYTALIDGHCKAGKIDEAISLLE 553

Query: 523 KM 524
           +M
Sbjct: 554 RM 555



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 2/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+  Y R      A   FN M   GC  ++++++ +I  LC   R  E  S F  +
Sbjct: 251 TYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKM 310

Query: 245 K-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + D   P V  YT ++          E   +F EM+    +PNV+TY++++DA+C+  ++
Sbjct: 311 REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKL 370

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             +  +  EM+E G  P+ +T+N L+R + +  R E  L++   M+   C  +  TYN L
Sbjct: 371 DESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNEL 430

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I    K   +  A+ +L+ M+     P+  T+N +     K G  + A+++   +K+   
Sbjct: 431 ICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGL 490

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  TY++ +     SK  +    L   ++E  ++ N   Y  LI  +C  G  + A  
Sbjct: 491 VPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAIS 550

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +  M  E CL P SS Y  ++  + + G++Q+   +VE M   G
Sbjct: 551 LLERMHSEDCL-PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 147/307 (47%), Gaps = 5/307 (1%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L++L        RP    +   Y+E+I    K +    A   +  M    +  ++ T++ 
Sbjct: 409 LEILGLMESNNCRP----NERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNS 464

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           L+    +AG    A    + ++E G  PD+  +S+ I  LC+ +R  EA   F+SLK+K 
Sbjct: 465 LIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKG 524

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
            + + ++YT L+ G C+AG I EA  +   M      PN  TY+ +I  +C+ G++    
Sbjct: 525 IKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGL 584

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +   M ++G +P   T+  L+   ++    +   +V+NQM   G + D  TY   I  +
Sbjct: 585 SMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTY 644

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C  G +++A  ++  M+  G  P++ T+ ++     +LG    A  +  +M D  C+P+ 
Sbjct: 645 CTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSH 704

Query: 428 VTYNILM 434
             +N L+
Sbjct: 705 PIWNNLI 711



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 1/284 (0%)

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           KF+  V  Y  L+    R   I E +RV+ EM    I PN+YT + +++A  + G I  A
Sbjct: 174 KFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA 233

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           +   +++ + G  P+S T+ +L+  + + +      +V+N M   GC  + ++Y  +I  
Sbjct: 234 NLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHG 293

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G++++ I +   M    C P   T+ +I   +           ++ +M++  CEPN
Sbjct: 294 LCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPN 353

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TY +++      +  D   ++  EM E  + P+V TY  LI  YC  G    A + + 
Sbjct: 354 VHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILG 413

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            M    C +P    Y  ++    +   + K   L+ KM++   T
Sbjct: 414 LMESNNC-RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLT 456


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 245/557 (43%), Gaps = 84/557 (15%)

Query: 50  PF--LSP---EETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPD-----FTIPSL----S 95
           PF  LSP   ++ L S+ F  L++   RKNP+ ++   PSL P      F  P+L    +
Sbjct: 28  PFSSLSPNSLQQDLPSQIFTILLQPQWRKNPSFNT-LIPSLTPTHLSSLFNNPNLHPLTA 86

Query: 96  LGFSQ--------ISTAHSISP--------------STVRHVIEKSCGVRHGIPLLQVLS 133
           L F +        I T HS  P                VR+ + KSC   H    +    
Sbjct: 87  LNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFV---- 142

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFD-LAWHFIDLMKSRNVEITVDTFSILVRR 192
             N +T   EF  S   Y+ +  +  +    D L   F D++    VE  + +F+ +V  
Sbjct: 143 -LNLLTHH-EFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLND-GVEPNLISFNTMVNA 199

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPD 251
           + + G    A   F  + ++G   D   ++ +I   C+     +A   F+ + ++    +
Sbjct: 200 HCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRN 259

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
            + YTNL+ G+C  G I EA  +F +MK  G  P+V TY++++ A C  G+ T A   F 
Sbjct: 260 EVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM+E G EPN  T+  L+    K  + ++ +++ + M   G  +  + +N LID +CK G
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRG 379

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            +EDAI VL+SM      PN+ T+N +     +   ++ A  +  KM + K  PN VTYN
Sbjct: 380 MMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYN 439

Query: 432 ILMQMFATSKSTDMVLKLK-----------------------------------KEMEEN 456
            L+     ++  D   +L                                    + ++E 
Sbjct: 440 TLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK 499

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
             E N   Y  LI  YC    +++A+   + M+ E C  P S  + ++L  LR+ G+++ 
Sbjct: 500 HAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCF-PNSITFNVLLDGLRKEGKVED 558

Query: 517 HEELVEKMVDRGFTARP 533
              LV+ M    F A+P
Sbjct: 559 AMSLVDVM--GKFDAKP 573



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 2/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F + M    +E  V T+++L+  + + G   E +   + M E G     + F+ +I 
Sbjct: 314 ALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALID 373

Query: 227 ILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C++    +A    DS+K +K  P+   Y  L+ G+CR  ++  A  +  +M    + P
Sbjct: 374 GYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSP 433

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N+ TY+ +I  LC+   +  A  +   M++ G  P+  TF   +    K  + E+  QV+
Sbjct: 434 NLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVF 493

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             +K    EA+   Y  LID +CK  K  DA  +   M+ +GC PN+ TFN++   + K 
Sbjct: 494 ESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKE 553

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V  A  +   M     +P   TY IL++        D       +M  +  +PNV TY
Sbjct: 554 GKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTY 613

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
              I  YC  G    A + + ++ EE  L   S +Y++++      GQL     ++ +M 
Sbjct: 614 TAFIKAYCRQGRLLEAEEMVVKIKEEGILLD-SFIYDVLVNAYGCIGQLDSAFGVLIRMF 672

Query: 526 DRG 528
           D G
Sbjct: 673 DTG 675



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 193/409 (47%), Gaps = 28/409 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+I    + +  D A   ++ M    +   + T++ L+    +A +   A    + M 
Sbjct: 403 YNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI 462

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
           + G  PD+  F   I  LC+  +  +A   F+SLK+K  E +  +YT L+ G+C+A   S
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFS 522

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F+ M   G  PN  T+++++D L + G++  A  +   M +   +P   T+  L+
Sbjct: 523 DAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILI 582

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              ++ S  ++     +QM   GC+ + +TY   I  +C+ G+L +A +++  +  +G  
Sbjct: 583 EEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGIL 642

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF------------ 437
            ++  ++++      +G ++ A  +  +M D  CEP+  TY+IL++              
Sbjct: 643 LDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL 702

Query: 438 ---ATSKSTD-----------MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
              +T+ S D           ++  L ++M E    PNVNTY  LI   C + H + A++
Sbjct: 703 DLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFR 762

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
               M +E  + P  +++  +L    + G  ++   L++ M++    A 
Sbjct: 763 LFNHM-KESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAH 810



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 171/373 (45%), Gaps = 16/373 (4%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV Q   A    + +K ++ E     ++ L+  Y +A   ++A   F RM   GC P+ 
Sbjct: 484 GKVEQ---AHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNS 540

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFR 276
           I F++++  L ++ +  +A S  D +  KF+  P V  YT L+    R  +   A     
Sbjct: 541 ITFNVLLDGLRKEGKVEDAMSLVDVM-GKFDAKPTVHTYTILIEEILRESDFDRANMFLD 599

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           +M  +G QPNV TY+  I A CR G++  A ++  ++ E G   +S  ++ L+  +    
Sbjct: 600 QMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIG 659

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           + +    V  +M   GCE    TY+ L         L+  I    +    G + N++  +
Sbjct: 660 QLDSAFGVLIRMFDTGCEPSRQTYSIL---------LKHLIFEKYNKEGMGLDLNSTNIS 710

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
           +    I K+ D      ++ KM +  C PN  TY+ L++     +   +  +L   M+E+
Sbjct: 711 VDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKES 770

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P+ N +  L++  C +G    A + +  M+E   L    S Y++++  L   G  +K
Sbjct: 771 GISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLES-YKLLVCGLFEQGNQEK 829

Query: 517 HEELVEKMVDRGF 529
            EE+   ++  G+
Sbjct: 830 AEEIFRSLLSCGY 842



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 142/337 (42%), Gaps = 30/337 (8%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV     A   +D+M   + + TV T++IL+   +R      A    ++M   GC P+ 
Sbjct: 554 GKVED---AMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNV 610

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++  I   CR+ R  EA+     +K++    D  +Y  LV  +   G +  A  V   
Sbjct: 611 VTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIR 670

Query: 278 MKMAGIQPNVYTYSIVIDAL--------------------CRCGQITRAHD------VFA 311
           M   G +P+  TYSI++  L                         I +  D      +F 
Sbjct: 671 MFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFE 730

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           +M+E GC PN  T++ L++   K        +++N MK  G       +N L+   CK G
Sbjct: 731 KMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLG 790

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
             E+A+++L+SM+      +  ++ ++   + + G+   A  ++  +       + V + 
Sbjct: 791 MHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWK 850

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           +L+         D   +L+  ME+     + +T+ +L
Sbjct: 851 VLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/359 (21%), Positives = 145/359 (40%), Gaps = 36/359 (10%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           +SI+ + +   + K   V   + L+ V+  F+   A+P  VH+   Y  +I    +   F
Sbjct: 539 NSITFNVLLDGLRKEGKVEDAMSLVDVMGKFD---AKPT-VHT---YTILIEEILRESDF 591

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A  F+D M S   +  V T++  ++ Y R G   EA     +++E G   D   + ++
Sbjct: 592 DRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVL 651

Query: 225 ISIL-CRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG---------------------- 261
           ++   C  +  S             EP    Y+ L++                       
Sbjct: 652 VNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISV 711

Query: 262 -----WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
                W +  +      +F +M   G  PNV TYS +I  LC+   ++ A  +F  M E 
Sbjct: 712 DNANIW-KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKES 770

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P+    N+L+    K    E+ L++ + M      A   +Y  L+    + G  E A
Sbjct: 771 GISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKA 830

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            ++  S++  G N +   + ++   + + G V+   ++   M+   C  ++ T+ +L Q
Sbjct: 831 EEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQ 889


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 196/409 (47%), Gaps = 40/409 (9%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   + HF D + ++  ++   ++ IL+    + G    A+     +E+    P
Sbjct: 92  LKGEVKK---SLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRP 148

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D + +S +I  LC+ +   EA   +  +  +   PDVI YT L+ G+C AG + EA  + 
Sbjct: 149 DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLL 208

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I PN+YTY+ +ID LC+ G++  + ++ A M + G +P+ + ++ LM  +   
Sbjct: 209 NEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLV 268

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +K  Q++  M + G   D  +YN +I+  CK  ++++A+ +L  M+ K   P+  T+
Sbjct: 269 GEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTY 328

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           + +   + KLG +     +  +M       N VTYN L+     +++ D  + L  +M+E
Sbjct: 329 SSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKE 388

Query: 456 NEVEPN-----------------------------------VNTYRILITMYCGMGHWNN 480
             ++PN                                   V TY ++I+  C  G ++ 
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDE 448

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A     +M +  C+ P +  +E++++ L    +  K E+L+ +M+ +G 
Sbjct: 449 ALAMKSKMEDNGCI-PNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL 496



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 190/399 (47%), Gaps = 12/399 (3%)

Query: 97  GFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMIN 156
           GF     ++ I  + +  + E  C ++       +L      + RP+ V    +Y  +I+
Sbjct: 110 GFQMDQVSYGILLNGLCKIGETRCAIK-------LLRTIEDRSTRPDVV----MYSTIID 158

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
              K +  D A+     M +R +   V T++ L+  +  AG   EA    N M      P
Sbjct: 159 GLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINP 218

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           +   ++ +I  LC++ +  E+++    +  K  +PDV++Y+ L+ G+C  G + +A+++F
Sbjct: 219 NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIF 278

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M   G+ P+VY+Y+I+I+ LC+  ++  A ++  EML     P+++T+++L+    K 
Sbjct: 279 LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R   +L +  +M   G  A+ +TYN L+D  CK+  L+ AI +   M  +G  PN  T+
Sbjct: 339 GRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 398

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             +   + K G +     ++  +       +  TY +++         D  L +K +ME+
Sbjct: 399 TALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMED 458

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           N   PN  T+ I+I         + A K + EMI +  L
Sbjct: 459 NGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLL 497



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 168/358 (46%), Gaps = 4/358 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+++ +   + T SIL+  +   G  A +     ++ + G  P+ I  + ++  LC K  
Sbjct: 36  MEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGE 95

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             ++  F D  +   F+ D + Y  L+ G C+ G    A ++ R ++    +P+V  YS 
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID LC+   +  A+D+++EM   G  P+ IT+  L+     A +  +   + N+M    
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              +  TYN LID  CK+GK++++  +L  M +KG  P+   ++++      +G+V  A 
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAK 275

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +++  M      P+  +YNI++      K  D  + L +EM    + P+  TY  LI   
Sbjct: 276 QIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGL 335

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C +G         +EM      +P + V Y  +L  L +   L K   L  KM +RG 
Sbjct: 336 CKLGRITTILDLTKEMHHRG--QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGI 391



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 2/322 (0%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAG 266
           +ME  G  PD +  SI+I+  C   + + + S     LK  ++P+ I+   L++G C  G
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            + ++     ++   G Q +  +Y I+++ LC+ G+   A  +   + +    P+ + ++
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            ++    K    ++   +Y++M   G   D ITY  LI   C  G+L +A  +LN M+ K
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
             NPN  T+N +   + K G V  +  +   M     +P+ V Y+ILM  +         
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            ++   M +  V P+V +Y I+I   C     + A   +REM+  K + P +  Y  ++ 
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREML-HKNMIPDTVTYSSLID 333

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L + G++    +L ++M  RG
Sbjct: 334 GLCKLGRITTILDLTKEMHHRG 355



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 1/279 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +I +  ++    +  +      + ++M+  GI P++ T SI+I+  C  GQ+  +  V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             ++L++G +PN+I  N LM+        +K L  ++++   G + D ++Y  L++  CK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G+   AIK+L ++  +   P+   ++ I   + K   V+ A+ +Y +M      P+ +T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L+  F  +        L  EM    + PN+ TY  LI   C  G    + K +  ++
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKES-KNLLAVM 246

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +K +KP   +Y +++      G++QK +++   MV  G
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 178/365 (48%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M    V++    ++ L+  Y R             ME  G  P    ++I++ 
Sbjct: 86  ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 145

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L   R  ++ ++ F+ +K K    DV  Y++++  +CRAGN+  A  VF E    GI+P
Sbjct: 146 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 205

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N +TY  +I+  C+ GQ+  A  +  +M   G   N I FN ++  + + +  +K L++ 
Sbjct: 206 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 265

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M+++G E D  TYN L     +  ++++A  +L  M+ KG  PN  ++  +       
Sbjct: 266 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNE 325

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD+  A R++ +M     EP+ VTYN++M  +    S     + K EME+  + P++ +Y
Sbjct: 326 GDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSY 385

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             L+  +C  G  + A +   EM +++  KP    Y  ++  L + G+ ++  +L + M+
Sbjct: 386 AALVHGHCVNGKVDVALRLFEEM-KQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNML 444

Query: 526 DRGFT 530
             G T
Sbjct: 445 GDGLT 449



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 171/361 (47%), Gaps = 6/361 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   + +  D     + +M++  +E TV T++ILV     A    +    F  M+
Sbjct: 105 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 164

Query: 211 EYGCAPDKIAFSIVISILCRK---RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN 267
               + D   +S VI+  CR    RRASE   F + + +  EP+   Y  L+ G+C+ G 
Sbjct: 165 SKNLSGDVYFYSSVINAYCRAGNVRRASEV--FDECVGNGIEPNEHTYGALINGFCKIGQ 222

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +  AE +  +M++ G+  N   ++ +ID  CR   + +A ++   M ++G E +  T+N 
Sbjct: 223 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 282

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L     +A+R ++   +   M   G   + ++Y  LI  HC +G + +A ++   M   G
Sbjct: 283 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T+N++     K G +  A R   +M+     P+  +Y  L+     +   D+ L
Sbjct: 343 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 402

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +L +EM++   +PN+  Y  LI+     G    A++    M+ +  L P  ++Y  ++  
Sbjct: 403 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG-LTPDDALYSALVGS 461

Query: 508 L 508
           L
Sbjct: 462 L 462



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 11/302 (3%)

Query: 150 LYHEMINL---AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
            Y  +IN    AG VR+   A    D      +E    T+  L+  + + G    A    
Sbjct: 174 FYSSVINAYCRAGNVRR---ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLV 230

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKR---RASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
             M+  G   ++I F+ +I   CRK    +A E +   + +    E DV  Y  L  G  
Sbjct: 231 TDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMG--IELDVYTYNTLACGLR 288

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RA  + EA+ + R M   G++PN  +Y+ +I   C  G +  A  +F EM   G EP+ +
Sbjct: 289 RANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLV 348

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N +M  ++K     +  +  N+M++ G   D  +Y  L+  HC +GK++ A+++   M
Sbjct: 349 TYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEM 408

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            ++G  PN   +  +   ++K G    A ++Y  M      P+   Y+ L+    T K  
Sbjct: 409 KQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQ 468

Query: 444 DM 445
           ++
Sbjct: 469 NV 470


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 193/412 (46%), Gaps = 19/412 (4%)

Query: 132 LSFFNWVTA---RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           LS F  +T     P+ V    L H +  +  +V +   A  F   M        V TF+ 
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLC-VEDRVSE---ALDFFHQMFETTCRPNVVTFTT 189

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-- 246
           L+    R G   EAV   +RM E G  P +I +  ++  +C+K     A +    +++  
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P+V++Y+ ++   C+ G  S+A+ +F EM+  GI P+++TY+ +I   C  G+ + A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +  EMLE    P+ +T+N L+   VK  +  +  ++Y++M   G   +TITY+ +ID 
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK  +L+ A  +   M  KGC+PN  TFN +         ++    +  +M +     +
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           T TYN L+  F      +  L L +EM  + + P++ T   L+   C  G   +A +  +
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 487 EMIEEK----------CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            M + K           ++P    Y +++  L   G+  + EEL E+M  RG
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 198/449 (44%), Gaps = 25/449 (5%)

Query: 102 STAHSISPSTVRHVIEK----SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI-- 155
           S A      ++R  + K    SC    G   L++ S F+ +    + +   DL+ +M+  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI---DLFSDMLRS 73

Query: 156 ----------NLAGKVRQF---DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
                      L G V +    DL       M+ + +   + +F+IL++ +        A
Sbjct: 74  RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA 133

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
           +  F ++ + G  PD + F+ ++  LC + R SEA  FF  + +    P+V+ +T L+ G
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNG 193

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEP 320
            CR G I EA  +   M   G+QP   TY  ++D +C+ G    A ++  +M EV    P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N + ++ ++    K  R      ++ +M+  G   D  TYN +I   C  G+  DA ++L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ +  +P+  T+N +     K G    A  +Y +M      PNT+TY+ ++  F   
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D    +   M      PN+ T+  LI  YCG    ++  + + EM E   L   ++ 
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG-LVADTTT 432

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y  ++      G L    +L+++M+  G 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 174/391 (44%), Gaps = 13/391 (3%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  +   A +    M+ + +   + T++ ++  +  +G  ++A      M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
            E   +PD + ++ +I+   ++ +  EA+  +D  L     P+ I Y++++ G+C+   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             AE +F  M   G  PN+ T++ +ID  C   +I    ++  EM E G   ++ T+N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-- 386
           +            L +  +M   G   D +T + L+D  C +GKL+DA+++   M +   
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 387 ---------GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
                    G  P+  T+N++   +   G    A  +Y +M      P+T+TY+ ++   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 D   ++   M      PNV T+  LI  YC  G  ++  +   EM   + +   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM-GRRGIVAN 615

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  Y  ++   R+ G +    ++ ++M+  G
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSG 646



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 177/403 (43%), Gaps = 15/403 (3%)

Query: 136 NWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           N  T   E    PDL  Y+ MI       ++  A   +  M  R +   V T++ L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
           V+ G   EA   ++ M   G  P+ I +S +I   C++ R   A+  F  +  K   P++
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I +  L+ G+C A  I +   +  EM   G+  +  TY+ +I      G +  A D+  E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTITYN 361
           M+  G  P+ +T + L+       + +  L+++  M++            G E D  TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI     +GK  +A ++   M  +G  P+  T++ +   + K   ++ A +M+  M   
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN VT+  L+  +  +   D  L+L  EM    +  N  TY  LI  +  +G+ N A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               +EMI    + P +     +L  L    +L++   ++EK+
Sbjct: 636 LDIFQEMISSG-VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 176/360 (48%), Gaps = 2/360 (0%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           +   F   M+       V T++ ++  Y +     EA      M   G  P+ I F+++I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           + LCR  R  E       +  K + PD + Y  LV G+C+ GN  +A  +  EM   G+ 
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV TY+ +I+++C+ G + RA + F +M   G  PN  T+  ++    +    ++  +V
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            N+M R G     +TYN LI+ HC  G++E+AI +L  MV KG  P+  +++ I    ++
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
             +++ A +M  +M      P+ VTY+ L+Q     +       + +EM   ++ P+  T
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI  YC  G  N A     EMI++  L P +  Y +++  L +  + ++   L+ K+
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFL-PDAVTYNVLINGLNKQARSKEARRLLLKL 359



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 160/320 (50%), Gaps = 1/320 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MI+   K+++ D A+ F+  M  + +E  + TF++++    R G   E       M 
Sbjct: 21  YNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMS 80

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD++ ++ +++  C++    +A     + +++   P+V+ YT+L+   C+AGN++
Sbjct: 81  RKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLN 140

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A   F +M + G+ PN  TY+ +I+   + G +  A+ V  EM   G  P+ +T+N L+
Sbjct: 141 RAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALI 200

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H    R E+ + +   M   G   D ++Y+ +I    ++ +L+ A ++   M+ K   
Sbjct: 201 NGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVL 260

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A T++ + + + +   +  A  M+ +M  +K  P+  TY  L+  +      +  L L
Sbjct: 261 PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHL 320

Query: 450 KKEMEENEVEPNVNTYRILI 469
             EM +    P+  TY +LI
Sbjct: 321 HDEMIQKGFLPDAVTYNVLI 340



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 175/366 (47%), Gaps = 16/366 (4%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           +R  +V     Y+ ++N   K   F  A      M    +   V T++ L+    +AG  
Sbjct: 80  SRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNL 139

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNL 258
             A+  F++M   G  P++  ++ +I+   ++    EA    + + +  F P ++ Y  L
Sbjct: 140 NRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNAL 199

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G C  G + EA  + ++M   G+ P+V +YS +I    R  ++ RA  +  EM+    
Sbjct: 200 INGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSV 259

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            P+++T+++L++   +  R  +   ++ +M  +    D  TY  LI+ +CK+G L  A+ 
Sbjct: 260 LPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALH 319

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ--- 435
           + + M++KG  P+A T+N++   ++K      A R+  K+      P+ VTYN L++   
Sbjct: 320 LHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCC 379

Query: 436 --MFATSKSTDMVLKLKKEMEENEV----------EPNVNTYRILITMYCGMGHWNNAYK 483
              F ++ +      +K  M+E +           +PN   Y ++I  +C +G+   AYK
Sbjct: 380 NIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYK 439

Query: 484 YIREMI 489
             +EM+
Sbjct: 440 LYKEMV 445



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 141/276 (51%), Gaps = 1/276 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+V+ Y  ++ G+C+     EA    R M + G++PN+ T++++I+ LCR G++    +V
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             EM   G  P+ +T+N L+  + K     + L ++ +M R G   + +TY  LI+  CK
Sbjct: 76  LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G L  A++  + M  +G  PN  T+  I    ++ G ++ A+R+  +M      P+ VT
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN L+         +  + L ++M    V P+V +Y  +I+ +      + A++   EMI
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI 255

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            +  L P +  Y  ++Q L    +L +  ++ ++M+
Sbjct: 256 GKSVL-PDAVTYSSLIQGLCEQRRLTEACDMFQEML 290



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           R F+EM+  G  PNV TY+ +ID  C+  +   A      M   G EPN ITFN ++   
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +  R ++  +V  +M R G   D +TYN L++ +CK+G    A+ +   MVR G +PN 
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+  +   + K G++N A   + +M      PN  TY  ++  FA     D   ++  E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  +   P++ TY  LI  +C +G    A   +++M+ +  L P    Y  ++    R  
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVL-PDVVSYSTIISGFARNQ 242

Query: 513 QLQKHEELVEKMVDR 527
           +L +  ++  +M+ +
Sbjct: 243 ELDRAFQMKVEMIGK 257



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 172/353 (48%), Gaps = 22/353 (6%)

Query: 105 HSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           + +SP+ V +  +I   C   +   L + + FF+ +  R     +   Y  +IN   +  
Sbjct: 117 NGLSPNVVTYTSLINSMCKAGN---LNRAMEFFDQMHVRG-LCPNERTYTTIINGFAQQG 172

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
             D A+  ++ M       ++ T++ L+  +   G   EA+     M   G  PD +++S
Sbjct: 173 LLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYS 232

Query: 223 IVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +IS   R +    A Q   + +     PD + Y++L++G C    ++EA  +F+EM   
Sbjct: 233 TIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTI 292

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            + P+ +TY+ +I+A C+ G + +A  +  EM++ G  P+++T+N L+    K +R+++ 
Sbjct: 293 KLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352

Query: 342 LQVYNQMKRLGCEADTITYNFLID--CH-------------CKDGKLEDAIKVLNSMVRK 386
            ++  ++         +TYN LI+  C+             C  G +++A +V  SM+ K
Sbjct: 353 RRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINK 412

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              PN + +N+I     ++G+V  A+++Y +M  +   P+TVT   L++   T
Sbjct: 413 NHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFT 465



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 154/341 (45%), Gaps = 18/341 (5%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y  +IN   K    + A  F D M  R +     T++ ++  + + GL  EA  
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             N M   G  P  + ++ +I+  C   R  EA      +  K   PDV+ Y+ ++ G+ 
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFA 239

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R   +  A ++  EM    + P+  TYS +I  LC   ++T A D+F EML +   P+  
Sbjct: 240 RNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEF 299

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+  + K     K L ++++M + G   D +TYN LI+   K  + ++A ++L  +
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359

Query: 384 VRKGCNPNASTFNMI--------FRCISKL-------GDVNGAHRMYGKMKDLKCEPNTV 428
                 P+A T+N +        F+    L       G ++ A +++  M +   +PN  
Sbjct: 360 FYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEA 419

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            YN+++       +     KL KEM   +  P+  T   L+
Sbjct: 420 IYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALV 460



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 1/188 (0%)

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+ + +M+R GC  + +TYN +ID +CK  + ++A   L SM  KG  PN  TFNMI   
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + + G +     +  +M      P+ VTYN L+  +    +    L L  EM  N + PN
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V TY  LI   C  G+ N A ++  +M   + L P    Y  ++    + G L +   ++
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQM-HVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 522 EKMVDRGF 529
            +M   GF
Sbjct: 182 NEMTRSGF 189



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 16/226 (7%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+  Y + G   +A+H  + M + G  PD + ++++I+ L ++ R+ EA+     L
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359

Query: 245 -KDKFEPDVIVYTNL---------------VRGWCRAGNISEAERVFREMKMAGIQPNVY 288
             D   P  + Y  L               V+G+C  G + EA++VF  M     +PN  
Sbjct: 360 FYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEA 419

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+++I   CR G + +A+ ++ EM+ V   P+++T   L++         ++ +V   +
Sbjct: 420 IYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDI 479

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
            R     D      L++ + K+G ++    +L  M + G  P+  T
Sbjct: 480 LRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/341 (20%), Positives = 129/341 (37%), Gaps = 51/341 (14%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            R  F+ S   Y+ +IN    + + + A   +  M  + V   V ++S ++  + R    
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNL 258
             A      M      PD + +S +I  LC +RR +EA   F + L  K  PD   YT L
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL--------------------- 297
           +  +C+ G++++A  +  EM   G  P+  TY+++I+ L                     
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS 364

Query: 298 -----------------------------CRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
                                        C  G +  A  VF  M+    +PN   +N +
Sbjct: 365 IPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVI 424

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  H +     K  ++Y +M  +     T+T   L+     +G   +  +V+  ++R   
Sbjct: 425 IHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCK 484

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +A    ++     K G+++    +  +M      P+T T
Sbjct: 485 LTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
           M L+  KEME N   PNV TY  +I  YC +   + A+ ++R M   K L+P    + M+
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSM-GLKGLEPNLITFNMI 59

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           +  L R G+L++  E++ +M  +G+
Sbjct: 60  INGLCRDGRLKETSEVLVEMSRKGY 84


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 181/378 (47%), Gaps = 1/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MI +  K  +   A      M++         ++ ++  Y  AG   +A     R+ 
Sbjct: 153 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 212

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           E GC P  ++F+ +++ L +KR+  EA S F+ +K   EP+   Y  ++   C  G + E
Sbjct: 213 ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 272

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A R+  EM+ A + PN+ T +I++D LC+  ++  A+ +F    + GC P+ +T+ +L+ 
Sbjct: 273 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 332

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              K  + ++  +++ +M   G  A+ + Y  LI      G+ ED  KV   ++R+GC P
Sbjct: 333 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKP 392

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           + +  N    C+ K G+V     ++  ++     P+  +Y+IL+     +        + 
Sbjct: 393 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 452

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
             M++     +   Y  ++  +C  G  + AY+ + EM +EKC++P  + Y  ++  L +
Sbjct: 453 HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM-KEKCVQPTVATYGAIVDGLAK 511

Query: 511 AGQLQKHEELVEKMVDRG 528
             +L +   L E+   +G
Sbjct: 512 IDRLDEAYMLFEEAKSKG 529



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 9/375 (2%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAW 168
           TV  ++++ C  R    L +    F   + R     +PD   Y  +I+  GK  Q D A+
Sbjct: 291 TVNIMVDRLCKARK---LEEAYKIFESASQRG---CNPDCVTYCSLIDGLGKKGQVDEAY 344

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
              + M           ++ L+R +   G   +    F  +   GC PD    +  +  +
Sbjct: 345 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCV 404

Query: 229 CRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            +     + +  F+ ++   F PDV  Y+ L+ G  +AG   E   +F  MK  G   + 
Sbjct: 405 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 464

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             Y+ V+D  C+ G++ +A+++  EM E   +P   T+  ++    K  R ++   ++ +
Sbjct: 465 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 524

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
            K  G E + + Y+ LID   K G++++A  +L  M++KG  PN  T+N +   + K  +
Sbjct: 525 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 584

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +N A   +  MK++KC PNT TY+IL+      +  +      ++M++  + PNV TY  
Sbjct: 585 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 644

Query: 468 LITMYCGMGHWNNAY 482
           +I+    +G+  +AY
Sbjct: 645 MISGLAKVGNITDAY 659



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 165/347 (47%), Gaps = 3/347 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           L    VRA    +AV A   M      P   A++++I  L   RR   A      +++  
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           +E  V ++T LVR   R G +++A  +  E+K + ++P++  Y++ ID   + G +  A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
             F E+   G +P+ +++ +++ V  KA R  +  +++ QM+          YN +I  +
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
              G+ EDA K+L  +  +GC P+  +FN I  C+ K   V+ A  ++  MK    EPN+
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNS 254

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
            TYNI++ M       +   ++  EME   + PN+ T  I++   C       AYK    
Sbjct: 255 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 314

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
             +  C  P    Y  ++  L + GQ+ +   L EKM+D G  A P+
Sbjct: 315 ASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 360



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 185/393 (47%), Gaps = 3/393 (0%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           V  R +F  +   Y  +I    + R+ + A   +  M+    E+ V  F+ LVR   R G
Sbjct: 35  VMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREG 94

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYT 256
             A+A+   + ++     PD + +++ I    +      A  FF  LK +  +PD + YT
Sbjct: 95  QVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYT 154

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           +++   C+AG + EAE +F +M+     P  Y Y+ +I      G+   A+ +   + E 
Sbjct: 155 SMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 214

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           GC P+ ++FN+++    K  + ++ L ++  MK+   E ++ TYN +ID  C  G++E+A
Sbjct: 215 GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEA 273

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            ++L+ M      PN  T N++   + K   +  A++++       C P+ VTY  L+  
Sbjct: 274 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 333

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
                  D   +L ++M +     N   Y  LI  +   G   + +K  +E+I   C KP
Sbjct: 334 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC-KP 392

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             ++    +  + +AG+++K   + E +   GF
Sbjct: 393 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 425



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 175/416 (42%), Gaps = 38/416 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ ++   GK R+ D A    ++MK ++ E    T++I++      G   EA    + ME
Sbjct: 223 FNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 281

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
                P+ +  +I++  LC+ R+  EA   F+S   +   PD + Y +L+ G  + G + 
Sbjct: 282 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 341

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA R+F +M  AG   N   Y+ +I      G+    H VF E++  GC+P+    N  M
Sbjct: 342 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYM 401

Query: 330 RVHVKASRTEK-----------------------------------VLQVYNQMKRLGCE 354
               KA   EK                                      +++ MK+ G  
Sbjct: 402 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 461

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D   YN ++D  CK GK+  A ++L  M  K   P  +T+  I   ++K+  ++ A+ +
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 521

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + + K    E N V Y+ L+  F      D    + +EM +  + PNV T+  L+     
Sbjct: 522 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 581

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               N A    + M E KC  P +  Y +++  L R  +  K     + M  +G  
Sbjct: 582 AEEINEALVCFQSMKEMKC-PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 636



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 149/294 (50%), Gaps = 9/294 (3%)

Query: 148 PDL-----YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           PDL     Y + +  AG+V +  + +  I   +S      V ++SIL+    +AG A E 
Sbjct: 392 PDLTLLNTYMDCVFKAGEVEKGRMIFEDI---RSYGFLPDVRSYSILIHGLTKAGQARET 448

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG 261
            + F+ M++ G A D  A++ V+   C+  +  +A    + +K+K  +P V  Y  +V G
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 508

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             +   + EA  +F E K  GI+ NV  YS +ID   + G+I  A+ +  EM++ G  PN
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+N+L+   VKA    + L  +  MK + C  +T TY+ LI+  C+  K   A     
Sbjct: 569 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 628

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            M ++G  PN  T+  +   ++K+G++  A+ ++ + K     P+  ++N L++
Sbjct: 629 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 682



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 182/382 (47%), Gaps = 3/382 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L+  ++    +  Q   A   +D +K   +E  +  +++ +  + +AG    A   F+ +
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNI 268
           +  G  PD ++++ +I +LC+  R  EA+  F  ++ ++  P    Y  ++ G+  AG  
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A ++   ++  G  P+V +++ ++  L +  ++  A  +F E+++   EPNS T+N +
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNII 260

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + +     R E+  ++ ++M+      + +T N ++D  CK  KLE+A K+  S  ++GC
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           NP+  T+  +   + K G V+ A+R++ KM D     N V Y  L++ F      +   K
Sbjct: 321 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 380

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + KE+     +P++      +      G      + I E I      P    Y +++  L
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG-RMIFEDIRSYGFLPDVRSYSILIHGL 439

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            +AGQ ++   +   M  +GF 
Sbjct: 440 TKAGQARETSNIFHAMKQQGFA 461



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 4/288 (1%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI 253
           +AG   +    F  +  YG  PD  ++SI+I  L +  +A E  + F ++K + F  D  
Sbjct: 406 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 465

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y  +V G+C++G + +A  +  EMK   +QP V TY  ++D L +  ++  A+ +F E 
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 525

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G E N + +++L+    K  R ++   +  +M + G   +  T+N L+D   K  ++
Sbjct: 526 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 585

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A+    SM    C PN  T++++   + ++   N A   +  M+     PN VTY  +
Sbjct: 586 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 645

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +   A   +      L +  + N   P+  ++  LI    GM + N A
Sbjct: 646 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE---GMSNANRA 690



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 37/308 (12%)

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +L     RA  + +A      M+    +P    Y+++I AL    +  RA ++  +M E
Sbjct: 14  ADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQE 73

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           VG E     F  L+R   +  +    L + +++K    E D + YN  IDC  K G ++ 
Sbjct: 74  VGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 133

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM----------------- 418
           A K  + +  +G  P+  ++  +   + K G +  A  ++ +M                 
Sbjct: 134 ACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 193

Query: 419 ------------------KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
                             ++  C P+ V++N ++      +  D  L L + M+++  EP
Sbjct: 194 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEP 252

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           N +TY I+I M C  G    AY+ + EM E   L P      +++ +L +A +L++  ++
Sbjct: 253 NSSTYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEAYKI 311

Query: 521 VEKMVDRG 528
            E    RG
Sbjct: 312 FESASQRG 319



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 9/217 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA      M 
Sbjct: 502 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 561

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ ++  L +    +EA   F S+K+ K  P+   Y+ L+ G CR    +
Sbjct: 562 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 621

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   +++M+  G+ PNV TY+ +I  L + G IT A+ +F      G  P++ +FN L+
Sbjct: 622 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 681

Query: 330 RVHVKASRTEKVLQ--VYNQMKRLGCEADTITYNFLI 364
                A+R  +  Q  VY Q+    C     ++NFL+
Sbjct: 682 EGMSNANRAMEAYQTTVY-QLSSSSC-----SWNFLV 712


>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
          Length = 977

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 38/342 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF W+  +P F H    Y  M+   G+ +QF      +D M     +    T++ L+
Sbjct: 464 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 523

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             Y RA    EA++ FN+M+E GC PD+                                
Sbjct: 524 HSYGRANYLNEAMNVFNQMQEAGCKPDR-------------------------------- 551

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
             + Y  L+    +AG +  A  +++ M+  G+ P+ +TYS++I+ L + G +  AH +F
Sbjct: 552 --VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 609

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC--HC 368
            EM++ GC PN +T+N +M +H KA   +  L++Y  M+  G E D +TY+ +++   HC
Sbjct: 610 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 669

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G LE+A  V   M +K   P+   + ++     K G+V  A + Y  M      PN  
Sbjct: 670 --GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 727

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           T N L+  F          +L + M    + P++ TY +L++
Sbjct: 728 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 769



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 141/255 (55%), Gaps = 3/255 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  G + + +TY+ ++  L R  Q    + +  EM+  GC+PN++T+N L+  + +A+  
Sbjct: 473 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 532

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            + + V+NQM+  GC+ D +TY  LID H K G L+ A+ +   M   G +P+  T+++I
Sbjct: 533 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 592

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G +  AH+++ +M D  C PN VTYNI+M + A +++    LKL ++M+    
Sbjct: 593 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 652

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP+  TY I++ +    G+   A     EM ++K   P   VY +++    +AG ++K  
Sbjct: 653 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKAW 711

Query: 519 ELVEKMVDRGFTARP 533
           +  + M+  G   RP
Sbjct: 712 QWYQAMLHAGL--RP 724



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 172/357 (48%), Gaps = 13/357 (3%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI--------LCRKRRASEAQ 238
           ++  R+Y  +G   E V +  R   +G A ++   ++ + I        L +      A 
Sbjct: 406 ALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL 465

Query: 239 SFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            FF  LK +  F+ D   YT +V    RA       ++  EM   G QPN  TY+ +I +
Sbjct: 466 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 525

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
             R   +  A +VF +M E GC+P+ +T+  L+ +H KA   +  + +Y +M+  G   D
Sbjct: 526 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 585

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           T TY+ +I+C  K G L  A K+   MV +GC PN  T+N++    +K  +   A ++Y 
Sbjct: 586 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 645

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M++   EP+ VTY+I+M++       +    +  EM++    P+   Y +L+ ++   G
Sbjct: 646 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 705

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +   A+++ + M+    L+P       +L    R  ++ +  EL++ M+  G   RP
Sbjct: 706 NVEKAWQWYQAMLHAG-LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RP 759


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 5/388 (1%)

Query: 146 HSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           HSP  +  +  ++L  K    D  W F      R  +  V +F I ++ +   G  ++  
Sbjct: 69  HSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR-TQFDVYSFGITIKAFCENGNVSKGF 127

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
               +ME  G +P+   ++I+I   CR     +A+  F  + D     +  +YT ++ G+
Sbjct: 128 ELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGF 187

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G   +   ++++MK+ G+ PN+YTY+ +I   CR G+++ A  VF E+ + G   N+
Sbjct: 188 FKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNA 247

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+N L+    +  +  K   +  +MKR      T T+N L+D  C  G+L+ A+  L  
Sbjct: 248 VTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +   G  P   T+N++    SK+G+ +    +  +M+D    P+ VTY ILM  F  S  
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDD 367

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +   ++   M+   + P+ +TY +LI   C  G+   A K  + M+E   L+P   +Y 
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMH-LQPNDVIYN 426

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            ++    +     K  + +E+MV  G T
Sbjct: 427 TMINGYCKECNSYKALKFLEEMVKNGVT 454



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 168/330 (50%), Gaps = 1/330 (0%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIV 254
           ++ L  +++ +F  M   G +P   +F+  + +L +         FF     + + DV  
Sbjct: 50  QSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYS 109

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           +   ++ +C  GN+S+   +  +M+  G+ PNV+ Y+I+I+A CR G I +A  +F+ M 
Sbjct: 110 FGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD 169

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           ++G   N   +  ++    K    +   ++Y +MK +G   +  TYN LI  +C+DGKL 
Sbjct: 170 DLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLS 229

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A KV + + ++G   NA T+N++   + + G V+ A  +  +MK     P T T+N+LM
Sbjct: 230 LAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                +   D  L   ++++   + P + TY ILI+ +  +G+ +   + +REM E++ +
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREM-EDRGI 348

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            P    Y +++    R+  ++K  E+   M
Sbjct: 349 SPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 159/322 (49%), Gaps = 2/322 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           ++I++  + + G   +    + +M+  G  P+   ++ +I+  CR  + S A   FD + 
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K     + + Y  L+ G CR G +S+AE +   MK A I P   T+++++D LC  GQ+ 
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A     ++  +G  P  +T+N L+    K   +  V ++  +M+  G     +TY  L+
Sbjct: 300 KALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILM 359

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           +   +   +E A ++ + M R G  P+  T+ ++   +   G++  A ++Y  M ++  +
Sbjct: 360 NTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQ 419

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN V YN ++  +    ++   LK  +EM +N V PNV +Y   I + C  G    A + 
Sbjct: 420 PNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRL 479

Query: 485 IREMIEEKCLKPGSSVYEMVLQ 506
           ++EM E   LKP  S+   V Q
Sbjct: 480 LKEMTEAG-LKPPESLCSKVGQ 500



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 4/233 (1%)

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VI+A  +   + ++ D F  M+  G  P+S +FNN + +  K+   ++    + +   LG
Sbjct: 44  VINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY--LG 101

Query: 353 -CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
             + D  ++   I   C++G +    ++L  M   G +PN   + ++     + GD++ A
Sbjct: 102 RTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQA 161

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             M+ +M DL    N   Y I++  F          +L ++M+   V PN+ TY  LIT 
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           YC  G  + A+K   E I ++ +   +  Y +++  L R GQ+ K E L+E+M
Sbjct: 222 YCRDGKLSLAFKVFDE-ISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 201/434 (46%), Gaps = 17/434 (3%)

Query: 97  GFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMIN 156
           GF     ++    + +  + E  C V+       +L      + RP  V    +Y+ +I+
Sbjct: 110 GFQMDHVSYGTLLNGLCKIGETRCAVK-------LLRMIEDRSTRPNVV----MYNTIID 158

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
              K +  + A+     M +R +     T++ L+  +   G    A    + M      P
Sbjct: 159 GLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINP 218

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
               ++I+I+ LC++    EA++    + K+  +P V+ Y+ L+ G+C  G +  A+++F
Sbjct: 219 GVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIF 278

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M   G+ PNVY+Y+I+I+ LC+C ++  A ++  EML     P+++T+N+L+    K+
Sbjct: 279 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 338

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R    L + N+M   G  AD +TY  L+D  CK+  L+ A  +   M  +G  P   T+
Sbjct: 339 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 398

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             +   + K G +  A  ++  +    C  +  TY +++         D  L +K +ME+
Sbjct: 399 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 458

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
           N   PN  T+ I+I         + A K + EMI +  L     V ++ +Q      +  
Sbjct: 459 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVFVQN-----END 513

Query: 516 KHEELVEKMVDRGF 529
           K E+L+ +M+ +G 
Sbjct: 514 KAEKLLHEMIAKGL 527



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 177/388 (45%), Gaps = 6/388 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H+P +  +++++    K++Q+  A      M+ + +     T +IL+  +   G  A + 
Sbjct: 6   HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
               ++ + G  PD I  + ++  LC K    ++  F D  +   F+ D + Y  L+ G 
Sbjct: 66  SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL 125

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ G    A ++ R ++    +PNV  Y+ +ID LC+   +  A+D+++EM   G  P++
Sbjct: 126 CKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+  L+       +      + ++M           YN LI+  CK+G +++A  +L  
Sbjct: 186 ITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAV 245

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M ++G  P   T++ +      +G+V  A +++  M  +   PN  +YNI++      K 
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-Y 501
            D  + L +EM    + P+  TY  LI   C  G   +A   + EM      +P   V Y
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG--QPADVVTY 363

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +L  L +   L K   L  KM +RG 
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGI 391



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 36/252 (14%)

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           ML V   P  I FN ++    K  +    + +  QM+  G  A+ +T N LI+C C  G+
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA---------------HRMYGK 417
           +  +  VL  +++ G  P+  T N + + +   G+V  +               H  YG 
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 418 MKDLKCE--------------------PNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           + +  C+                    PN V YN ++      K  +    L  EM+   
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + P+  TY  LI  +C +G    A+  + EMI  K + PG  +Y +++  L + G +++ 
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI-LKNINPGVYIYNILINALCKEGNVKEA 239

Query: 518 EELVEKMVDRGF 529
           + L+  M   G 
Sbjct: 240 KNLLAVMTKEGI 251


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 172/330 (52%), Gaps = 7/330 (2%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF----DSLKDKFEPDVIVYTNLVRGWC 263
           RM E GC PD ++++ ++   C ++RA EA        DS      P+V+ Y  ++ G+ 
Sbjct: 155 RMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFF 214

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G + +A  +F EM   GIQPNV TY+ VID LC+   + RA  VF +M++ G +P++ 
Sbjct: 215 TEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDND 274

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+  ++   + ++V+++  +M   G + D  TY  L++  C +G+  +A  + +SM
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSM 334

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +RKG  PN + + ++    +  G ++  H +   M +    P+   +NI+   +A     
Sbjct: 335 IRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMI 394

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  + +  +M++  + P+V  Y  LI   C +G  ++A     +M+ E  + P   V+  
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG-VAPNIFVFNS 453

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           ++  L    + +K +E   +M+++G   RP
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGI--RP 481



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 2/369 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q D A++    M  R ++  V T++ ++    +A +   A   F +M + G  PD   ++
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 223 IVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I       +  E     + +     +PD   Y +L+   C  G   EA  +F  M   
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRK 337

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           GI+PNV  Y I+I      G ++  HD+   M+E G  P+   FN +   + K +  ++ 
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           + ++N+MK+ G   D + Y  LID  CK G+++DA+   N M+ +G  PN   FN +   
Sbjct: 398 MHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +  +     A   Y +M +    P+ V +N ++    T        +L   ME     P 
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPG 517

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V +Y  LI  +C +G  + A K +  M+    LKP    Y  +L    RAG++     + 
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVG-LKPDEWTYNTLLHGYCRAGRIDDAYGVF 576

Query: 522 EKMVDRGFT 530
            +M+  G T
Sbjct: 577 REMLRNGIT 585



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 169/362 (46%), Gaps = 2/362 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            ++LM    +      F+I+   Y +  +  EA+H FN+M++ G +PD + +  +I  LC
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALC 424

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  R  +A   F+ + ++   P++ V+ +LV G C      +A+  + EM   GI+P+V 
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            ++ ++  LC  GQ+ +A  +   M  VG  P  I++  L+  H    R ++  +  + M
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVM 544

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             +G + D  TYN L+  +C+ G+++DA  V   M+R G  P   T++ I   +      
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRF 604

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +Y  M     + N   YNI++   + +   D   KL + +   + +  + T+ I+
Sbjct: 605 SEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I      G  N    ++   I    L P    Y ++ + L   G L++ ++L   M   G
Sbjct: 665 IGALFKSGR-NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723

Query: 529 FT 530
            T
Sbjct: 724 TT 725



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 164/379 (43%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K +  D A      M  + V+   DT++ L+  Y+  G   E V     M 
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            +G  PD   +  +++ LC   R  EA+  FDS+ +   +P+V +Y  L+ G+   G +S
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALS 360

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E   +   M   G+ P+ + ++I+  A  +   I  A  +F +M + G  P+ + +  L+
Sbjct: 361 EMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALI 420

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R +  +  +NQM   G   +   +N L+   C   K E A +    M+ +G  
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   FN I   +   G V  A R+   M+ +   P  ++Y  L+         D   K 
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKS 540

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M    ++P+  TY  L+  YC  G  ++AY   REM+    + PG   Y  +L  L 
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG-ITPGVVTYSTILHGLF 599

Query: 510 RAGQLQKHEELVEKMVDRG 528
              +  + +EL   M+  G
Sbjct: 600 TTRRFSEAKELYLNMITSG 618



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 160/332 (48%), Gaps = 4/332 (1%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI 253
           RA  A E +H     +   C P+ ++++IVI+    + +  +A + F  + D+  +P+V+
Sbjct: 180 RAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVV 239

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            YT ++ G C+A  +  AE VF++M   G++P+  TY+ +I      G+      +  EM
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G +P+  T+ +L+       R  +   +++ M R G + +   Y  LI  +   G L
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +   +LN MV  G +P+   FN+IF   +K   ++ A  ++ KMK     P+ V Y  L
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGAL 419

Query: 434 MQMFAT-SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           +       +  D VLK  + M E  V PN+  +  L+   C +  W  A ++  EM+ + 
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEG-VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            ++P    +  +L  L   GQ+ K + L++ M
Sbjct: 479 -IRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 179/391 (45%), Gaps = 12/391 (3%)

Query: 147 SPDLYHEMINLA----GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           SPD  H + N+      K    D A H  + MK + +   V  +  L+    + G   +A
Sbjct: 375 SPD--HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDA 432

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDSLKDKFEPDVIVYTNLVRG 261
           V  FN+M   G AP+   F+ ++  LC   +  +A+ F F+ L     PDV+ +  ++  
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C  G + +A+R+   M+  G +P V +Y+ +I   C  G+I  A      ML VG +P+
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+N L+  + +A R +    V+ +M R G     +TY+ ++       +  +A ++  
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM--KDLKCEPNTVTYNILMQMFAT 439
           +M+  G   N   +N+I   +SK   V+ A +++  +  KD + E    T+NI++     
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE--ITTFNIMIGALFK 670

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           S   +  + L   +    + P+V TY ++       G+    +  +   +E+    P S 
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE-FDDLFSAMEKSGTTPNSR 729

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +   ++++L   G + +    + K+ ++ F+
Sbjct: 730 MLNALVRRLLHRGDITRAGAYLCKLDEKNFS 760



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 161/367 (43%), Gaps = 4/367 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I+   K+ + D A    + M +  V   +  F+ LV          +A  
Sbjct: 410 SPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
            +  M   G  PD + F+ ++  LC K +  +AQ   D + +    P VI YT L+ G C
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHC 529

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G I EA +    M   G++P+ +TY+ ++   CR G+I  A+ VF EML  G  P  +
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T++ ++       R  +  ++Y  M   G + +   YN +++   K+  +++A K+  S+
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             K      +TFN++   + K G    A  ++  +      P+  TY ++ +        
Sbjct: 650 CSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYL 709

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +    L   ME++   PN      L+      G    A  Y+ ++ +EK     +S   M
Sbjct: 710 EEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKL-DEKNFSLEASTTAM 768

Query: 504 VLQQLRR 510
           ++  L R
Sbjct: 769 LISLLSR 775



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 18/309 (5%)

Query: 236 EAQSFFDSLKDKFEP-DVIVYTNLV----RGWCRAGNISEAE-------RVFREMKMAGI 283
           +A   FD L     P  VI + +L+    R   R  + +E+E       R+ RE  +  +
Sbjct: 32  DALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK-V 90

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P+  TYSI+I   CR G++      F  +L+ G   N+I  N L++    A R  + + 
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 344 VY-NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV---RKGCNPNASTFNMIF 399
           +   +M  LGC  D ++YN L+   C + + E+A+++L+ M     + C PN  ++ ++ 
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
                 G V+ A+ ++ +M D   +PN VTY  ++     ++  D    + ++M +  V+
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+ +TY  LI  Y  +G W    + + EM     LKP    Y  +L  L   G+ ++   
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 520 LVEKMVDRG 528
           L + M+ +G
Sbjct: 330 LFDSMIRKG 338


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 200/390 (51%), Gaps = 3/390 (0%)

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           EF  S   ++ +++   K+   D+A  F  +M    +     +++IL+   + AG   EA
Sbjct: 180 EFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEA 239

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVR 260
           +   N ME+ G  PD + + IV          S A+     +   +  +PD++ YT L+ 
Sbjct: 240 LELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLIC 299

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G C+ GNI EA R+ R++  +G Q NV  YS+++ +LC+ GQ+  A  +  EM     +P
Sbjct: 300 GHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQP 359

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           + +T++ L+    K  + ++ +Q+Y +M       ++  ++ ++   C+ G L DA    
Sbjct: 360 DLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYF 419

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           +S++     P+ + +N++     KLGDV  A R+Y +++D    P+ VT+N L+  F  +
Sbjct: 420 DSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKN 479

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
           +      +L + ++ + +EP+  TY  L+  YC  G+ N  ++ + EM   K ++P    
Sbjct: 480 RKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEM-NLKDIEPTVVT 538

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           Y +V++ L +  +L++  +L+E M  +G  
Sbjct: 539 YTVVIKGLCKQRKLEESVQLLEDMRAKGLA 568



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 187/416 (44%), Gaps = 37/416 (8%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           LY  +++   K  Q D A   +  M++ N++  + T+SIL+    + G   +A+  +  M
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-------------------------- 243
                 P+  A S ++  LC K   S+A+ +FDS                          
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447

Query: 244 ---------LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
                    L+DK   P ++ + +L+ G+C+   + EA R+   +K+ G++P+  TY+ +
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTL 507

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ++A C  G I + H++  EM     EP  +T+  +++   K  + E+ +Q+   M+  G 
Sbjct: 508 MNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGL 567

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D ITYN +I C CK   +  A ++L+ M+     P  +T+N++   + + GDV  A R
Sbjct: 568 APDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADR 627

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   ++D       V Y  +++           +K+  +M E   E ++  Y  +I   C
Sbjct: 628 VLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLC 687

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                N A  Y   M+ +  + P   ++EM+L    RAG +    EL+  M+  G 
Sbjct: 688 KRCLINEAKYYFCIMLSDG-VSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 176/344 (51%), Gaps = 2/344 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDS 243
           T+++L+  + + G   EA+     +   G   + I +S+++S LC++ +  EA Q  ++ 
Sbjct: 293 TYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEM 352

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +  +PD++ Y+ L+ G C+ G + +A ++++EM    I PN + +S ++  LC  G +
Sbjct: 353 EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGML 412

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A   F  ++     P+   +N ++  +VK    E+ +++Y +++        +T+N L
Sbjct: 413 SDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSL 472

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   CK+ K+ +A ++L S+   G  P+A T+  +     + G++N  H +  +M     
Sbjct: 473 IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDI 532

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           EP  VTY ++++     +  +  ++L ++M    + P+  TY  +I  +C       A++
Sbjct: 533 EPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFE 592

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            + +M+    L+P  + Y +++  L R G ++  + ++  + DR
Sbjct: 593 LLDDMLIHN-LEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/385 (21%), Positives = 169/385 (43%), Gaps = 15/385 (3%)

Query: 136 NWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           N      +FV   D YH   N  G    +V +F ++       + +++ + +D    +++
Sbjct: 37  NLSVQNADFV--ADFYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQ---MLQ 91

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
             V + +  +A+    +M+E    P    ++   S+L   R        ++ +KD   P 
Sbjct: 92  EEVASRMVHDALFVLVKMKEQNLRPSIQTYN---SLLYNLRHTDIMWDVYNDIKDSGTPQ 148

Query: 252 VIVYTNL-VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
               +++ V G C      +A    R+       P+V +++ ++   C+ G    A   F
Sbjct: 149 SARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFF 208

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
             ML+ G  P++ ++N L+   + A   E+ L++ N M++ G + D +TY  +       
Sbjct: 209 CMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLL 268

Query: 371 GKLEDAIKVLNSMVR-KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           G +  A +++  M+  +G  P+  T+ ++     ++G++  A R+   +     + N + 
Sbjct: 269 GLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVIL 328

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y++L+         D  L+L  EME N ++P++ TY ILI   C  G    A +  +EM 
Sbjct: 329 YSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC 388

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQL 514
             +   P S  +  +L+ L   G L
Sbjct: 389 FNRIF-PNSFAHSGILKGLCEKGML 412



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 6/227 (2%)

Query: 306 AHD---VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
            HD   V  +M E    P+  T+N+L+        T+ +  VYN +K  G      T + 
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLL---YNLRHTDIMWDVYNDIKDSGTPQSARTSSI 155

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           ++D  C   +  DA+  L     K   P+  +FN I     KLG  + A   +  M    
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+T +YNIL+     + S +  L+L  +ME+  ++P++ TY+I+   +  +G  + A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + I++M+ ++ LKP    Y +++    + G +++   L   ++  GF
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 198/436 (45%), Gaps = 40/436 (9%)

Query: 132 LSFFNWVTARPEFVHSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           L+FF W + +    +S D +    ++ L  + R F    + ++ MKS+ +  T +  S +
Sbjct: 78  LNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFV 137

Query: 190 VRRYVRAGLAAEAVHAFNR-MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-- 246
           +  Y  +GL  EA+  +N  ++ + C PD  A + ++++L    +   A+  +D + D  
Sbjct: 138 ISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRN 197

Query: 247 -------------------KFE---------------PDVIVYTNLVRGWCRAGNISEAE 272
                              K E               P+++ Y  L+ G+C+ G+I  A 
Sbjct: 198 GDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERAN 257

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F+E+K+ G  P V TY  +I+A C+ G+      +  EM E G   +   FN ++   
Sbjct: 258 LLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDAR 317

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K     +       M   GCE D  TYN LI+  C  GK+ +A ++L   +R+G  PN 
Sbjct: 318 FKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNK 377

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            ++  +    SK G+   A  +  +M +     + + Y  L+     +   D+ L ++ +
Sbjct: 378 FSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDK 437

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M E  + P+ N Y +L++  C  G +  A + + EM+++  + P + V   ++    R G
Sbjct: 438 MMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQN-VTPDAFVNATLVDGFIRHG 496

Query: 513 QLQKHEELVEKMVDRG 528
            L + ++L +  ++RG
Sbjct: 497 NLDEAKKLFQLTIERG 512



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 170/401 (42%), Gaps = 37/401 (9%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+ +   Y  MIN   K  +F+     +  MK R + +++  F+ ++    + G   EA 
Sbjct: 268 FLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAA 327

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--------KDKFEP----- 250
            A   M E GC PD   ++ +I+  C K +  EA+   +          K  + P     
Sbjct: 328 DAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAF 387

Query: 251 -----------------------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
                                  D+I Y  LV G   AG +  A  V  +M   GI P+ 
Sbjct: 388 SKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDA 447

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             Y++++  LC+ G+   A  +  EML+    P++     L+   ++    ++  +++  
Sbjct: 448 NIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQL 507

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
               G +   +  N +I  +CK G + DA+     M     +P+  T++ I     K  D
Sbjct: 508 TIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQND 567

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           + GA RM+G M    C+PN VT+  L+  F  +   +   K+ +EM     EPNV TY I
Sbjct: 568 LRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTI 627

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           LI  +C  G    A  +  +M+  KC+ P  + +  ++  L
Sbjct: 628 LIGYFCKEGKLTKACFFFEQMLINKCI-PNDATFNYLVNGL 667



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 134/263 (50%), Gaps = 14/263 (5%)

Query: 147 SPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD +     + G +R    D A     L   R ++ +V   + +++ Y + G+  +A+ 
Sbjct: 479 TPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALL 538

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWC 263
            F RM     +PD+  +S +I    ++     A   F   LK   +P+V+ +T+L+ G+C
Sbjct: 539 CFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFC 598

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R G+++ AE+VF EM+  G +PNV TY+I+I   C+ G++T+A   F +ML   C PN  
Sbjct: 599 RNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDA 658

Query: 324 TFNNLMR-------VHVKASRTEK----VLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           TFN L+        + + + R+       L+ +  M   G +     YN ++ C C+   
Sbjct: 659 TFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKM 718

Query: 373 LEDAIKVLNSMVRKGCNPNASTF 395
           ++ A+++ + M+ KG  P+  +F
Sbjct: 719 VKPALQLHDKMMSKGFPPDPVSF 741


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 194/401 (48%), Gaps = 6/401 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF W   +  + H P +Y+ M+ +  K +    +   + LMK R +  T + FS ++ 
Sbjct: 191 LKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV 250

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEP 250
            Y RAG   +A+     M+  G  P+ +  +  I +  R  R  +A  F + ++     P
Sbjct: 251 SYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVP 310

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V+ Y  ++RG+C    + EA  +  +M   G  P+  +Y  ++  LC+  +I    D+ 
Sbjct: 311 NVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370

Query: 311 AEML-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            +M  E G  P+ +T+N L+ +  K    ++ L      +  G   D + Y+ ++   CK
Sbjct: 371 KKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK 430

Query: 370 DGKLEDAIKVLNSMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           +G++ +A  ++N M+ KG C P+  T+  +     +LG+V+ A ++   M     +PNTV
Sbjct: 431 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTV 490

Query: 429 TYNILMQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           +Y  L+  M  T KS +   ++    EE+   PN  TY +++      G  + A   +RE
Sbjct: 491 SYTALLNGMCRTGKSLE-AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVRE 549

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           M+  K   PG     ++LQ L R G+  +  + +E+ +++G
Sbjct: 550 MV-LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 166/344 (48%), Gaps = 7/344 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+    +   A EA+      +E G   DK+ +S ++  LC++ R SEA+   + +
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444

Query: 245 KDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
             K    PDV+ YT +V G+CR G + +A+++ + M   G +PN  +Y+ +++ +CR G+
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
              A ++     E    PNSIT++ +M    +  +  +   V  +M   G     +  N 
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+   C+DG+  +A K +   + KGC  N   F  +     +  +++ A  +   M  + 
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
              +  TY  L+             +L K+M    ++P   TYR +I  YC MG  ++  
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLV 684

Query: 483 KYIREMI-EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             + +MI  +KC     ++Y  V+++L   G+L++ + L+ K++
Sbjct: 685 AILEKMISRQKC----RTIYNQVIEKLCVLGKLEEADTLLGKVL 724



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 143/350 (40%), Gaps = 34/350 (9%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ +V  + R G   +A      M  +G  P+ ++++ +++ +CR  ++ EA+   +
Sbjct: 454 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 513

Query: 243 -SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            S +  + P+ I Y+ ++ G  R G +SEA  V REM + G  P     ++++ +LCR G
Sbjct: 514 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 573

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   A     E L  GC  N + F  ++    +    +  L V + M  +   AD  TY 
Sbjct: 574 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 633

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF-------------------------- 395
            L+D   K G++ +A +++  M+ KG +P   T+                          
Sbjct: 634 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693

Query: 396 -------NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
                  N +   +  LG +  A  + GK+       +  T   LM+ +          K
Sbjct: 694 QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYK 753

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
           +   M    + P+V     L       G  + A K +  ++E   + P S
Sbjct: 754 VACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 803


>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 192/401 (47%), Gaps = 13/401 (3%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRNVE-ITVDTFSI 188
           FF W   +  + H P  Y+EMI++      KV+QF +    +D MK  + + + V+   +
Sbjct: 259 FFMWAGHQDCYSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLM 318

Query: 189 LVRRYVRAGLAAEAVHAFNRMEE--YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           ++R+Y    LA   +H F + ++      P+  A ++++  LC+     +AQ+ F  +K+
Sbjct: 319 ILRKYTEKHLAH--LHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKN 376

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           K +PD   Y  L  GWCR  N S   RV  EM   G  P+ +TY+  ID+ C+ G +T A
Sbjct: 377 KVKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEA 436

Query: 307 HDVFAEMLEVG---CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            ++F  M   G     P + T+  ++   V++ RTE+  ++   M   G   D  TY  +
Sbjct: 437 TELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQV 496

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C  GK+E+A K L  M  KG  P+  T+N     + +      A  +YG+M +  C
Sbjct: 497 IEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGC 556

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  T+N+L+ MF      D   +   EM++     + +TY ++I          +A  
Sbjct: 557 VPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACF 616

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            + E+I  K +K     ++  L QL   G LQ   +L E M
Sbjct: 617 LLDEVI-NKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHM 656



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 4/239 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGC---APDKIAFSIVISILCRKRRASEAQSFF 241
           T++  +  + +AG+  EA   F  M   G    +P    ++I+I  L +  R  E     
Sbjct: 419 TYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLI 478

Query: 242 -DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            D +     PDV  Y  ++ G C AG + EA +   EM   G +P++ TY+  +D LC  
Sbjct: 479 KDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCEN 538

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +   A  ++  M+E GC P+  TFN L+ +  +    +   + +++M + GC  DT TY
Sbjct: 539 KKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTY 598

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
             +I+      K+EDA  +L+ ++ KG       F+     +S +GD+   H++   M+
Sbjct: 599 CVMIEGLFNCNKMEDACFLLDEVINKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMR 657



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 7/169 (4%)

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK   +EDA + +   V+    P+A+T+N++F    ++ + +   R+  +M ++   P++
Sbjct: 359 CKCSLVEDA-QAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDS 417

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEME---ENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            TYN  +  F  +       +L + M         P   TY I+I            +K 
Sbjct: 418 FTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKL 477

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           I++MI    L P  S Y+ V++ +  AG++++  + +E+M ++G+  RP
Sbjct: 478 IKDMINSGVL-PDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGY--RP 523


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 178/359 (49%), Gaps = 2/359 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F D + ++ + +    +  L+    + G + +A      ME     P+ + ++++I 
Sbjct: 173 AMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 232

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+     +A+  +  + D   +PD++ YT+L+RG+CR G   E +++  EM    I P
Sbjct: 233 SFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINP 292

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NVYT++++IDA CR G++  A  +F  M++ G +P+ +TFN L+  H       +  +++
Sbjct: 293 NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLF 352

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + +   G   D  +Y  LI  +CK  ++++A+ + N M  K    +   ++ +   + K 
Sbjct: 353 DTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKS 412

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G ++ A  ++  + +    PN +TYNIL+  F   +  DM ++L K M    + P V TY
Sbjct: 413 GRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTY 472

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            ILI  YC       A   +  M + K L P S  Y  +   L ++G++    EL + M
Sbjct: 473 NILINGYCKSKRIREAMNLLSVM-QSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 530



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 166/366 (45%), Gaps = 17/366 (4%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMIN------LAGKVRQFDLAW 168
           +I   C +   I   Q+L        +P  V    +Y+ +I+      L  K R  DL  
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIV----IYNMIIDSFCKDELTCKAR--DLYL 248

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
             +D+     ++  + T++ L+R + R G   E       M      P+   F+++I   
Sbjct: 249 KIVDM----GIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 229 CRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           CRK +  EAQ  F+ + K   +PD++ +  L+ G C  GN+ EA ++F  +   GI P+V
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
           ++Y+I+I   C+C +I  A  +F EM       + + +++L+    K+ R     ++++ 
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           +   G   + ITYN LID  CK   ++  I++   M  KG  P   T+N++     K   
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +  A  +   M+     P+++TYN L      S       +L K M       +V TY +
Sbjct: 485 IREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNV 544

Query: 468 LITMYC 473
           L+  +C
Sbjct: 545 LLDAFC 550



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 164/339 (48%), Gaps = 1/339 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   K+ +   A+  +  M+ + V+  +  +++++  + +  L  +A   + ++ 
Sbjct: 192 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 251

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD + ++ +I   CR  +  E +     + +K   P+V  +  L+  +CR G + 
Sbjct: 252 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 311

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ +F  M   G QP++ T++ +I   C  G +  A  +F  + E G  P+  ++  L+
Sbjct: 312 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 371

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K  R ++ + ++N+M+      D + Y+ LID  CK G++  A ++ +++   G  
Sbjct: 372 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP 431

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N++     K+ D++    ++  M      P  +TYNIL+  +  SK     + L
Sbjct: 432 PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNL 491

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
              M+   + P+  TY  L    C  G  ++A++  + M
Sbjct: 492 LSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 530



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 127/243 (52%), Gaps = 1/243 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    +LM  R  +  + TF+ L+  +   G   EA   F+ + E G  PD  +++I+I 
Sbjct: 313 AQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 372

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+ +R  EA S F+ ++ K    D+++Y++L+ G C++G IS A  +F  +   G  P
Sbjct: 373 GYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP 432

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+I+IDA C+   I    ++F  M   G  P  +T+N L+  + K+ R  + + + 
Sbjct: 433 NVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLL 492

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           + M+      D+ITYN L D  CK G++ DA ++   M   G   + +T+N++     K 
Sbjct: 493 SVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKA 552

Query: 406 GDV 408
            DV
Sbjct: 553 QDV 555



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 2/348 (0%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           +V  F+ ++   V+      A+    +M   G  P     SI I+  C       A S  
Sbjct: 83  SVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVL 142

Query: 242 D-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
              LK  ++P+ I  T +++G C  G + +A      +   G+  +   Y  +I+ LC+ 
Sbjct: 143 GIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKI 202

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+   A  +  EM     +PN + +N ++    K   T K   +Y ++  +G + D +TY
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             LI   C+ G+  +  +++  MV K  NPN  TFN++     + G +  A  M+  M  
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              +P+ VT+N L+       +     KL   + E  + P+V +Y ILI  YC     + 
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A     EM   K +     +Y  ++  L ++G++    EL   + + G
Sbjct: 383 AVSLFNEM-RCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDG 429



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 1/279 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P VI +  ++    +  +   A  + ++M   G+ P+++T SI I+  C  G++  A  V
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              +L+ G +PN+IT   +M+        +K +  ++ +   G   D + Y  LI+  CK
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G+  DA ++L  M  +   PN   +NMI     K      A  +Y K+ D+  +P+ +T
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L++ F  +     V +L  EM    + PNV T+ +LI  +C  G    A      M+
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +    +P    +  ++      G + +  +L + + +RG
Sbjct: 322 KRG-QQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG 359



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 24/129 (18%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
           + +S    ++ A  ++  + +++  P+ + +N ++      K   + + L K+M    V 
Sbjct: 57  KILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVT 116

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P++ T  I I  YC +G    A+  +  ++ ++  +P +     V++ L   G++QK  +
Sbjct: 117 PSIFTLSIWINCYCHLGEMGFAFS-VLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMD 175

Query: 520 LVEKMVDRG 528
             + +  +G
Sbjct: 176 FHDNVAAQG 184


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 182/379 (48%), Gaps = 7/379 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +IN   K      A   I+ +    ++    T++ ++  Y R      A   FNRM
Sbjct: 230 IYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
           +E GC P+   +S +I+ LC   R +EA  F   + +    P V  +T  +   C  G I
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRI 349

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR-AHDVFAEMLEVGCEPNSITFNN 327
            +A ++F +MK  G +PNVYTY+ +I       +++R A  +F  M   G  PN++T+N 
Sbjct: 350 EDAWKIFIDMKKKGCKPNVYTYTSLISG----QRVSRMAIGLFHRMSRDGVVPNTVTYNA 405

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           LM V ++    +  L V+N M + GC  +T +YN LI  +C  G  E A+ +L +M++  
Sbjct: 406 LMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGR 465

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P   T+N+I +     GD + A R+   MK   C+P+  +Y  L+  F      ++  
Sbjct: 466 PTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELAS 525

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            +  EM +  + PN  TY  LI+ YC     + A + +  M    C +P    Y +++  
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC-RPNVQTYNVLIHG 584

Query: 508 LRRAGQLQKHEELVEKMVD 526
           L +       EEL + M++
Sbjct: 585 LTKQNNFSGAEELCKVMLE 603



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 178/366 (48%), Gaps = 11/366 (3%)

Query: 167 AWH-FIDLMKSRNVEITVDTFSILV--RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           AW  FID MK +  +  V T++ L+  +R  R      A+  F+RM   G  P+ + ++ 
Sbjct: 352 AWKIFID-MKKKGCKPNVYTYTSLISGQRVSRM-----AIGLFHRMSRDGVVPNTVTYNA 405

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           ++++L        A   F+ + K    P+   Y  L+RG+C  G+  +A  +   M    
Sbjct: 406 LMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGR 465

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P + TY+I+I   C  G    A  V   M   GC+P+  ++  L+    K S+ E   
Sbjct: 466 PTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELAS 525

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            ++N+M   G   + +TY  LI  +CKD KL+ A ++L  M R GC PN  T+N++   +
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           +K  + +GA  +   M + K  P+ VTY+ ++     + +  + L++  +M ++   PN+
Sbjct: 586 TKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNL 645

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           +TY  LI      G    A +   E+ +++ L P    Y  +++    +G++ +  + + 
Sbjct: 646 HTYSSLIQALGQEGRVEEAEEMFSEL-KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLG 704

Query: 523 KMVDRG 528
           +M++ G
Sbjct: 705 EMINAG 710



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 155/309 (50%), Gaps = 2/309 (0%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVR 260
           A+  FN M ++GC P+  +++ +I   C      +A S   + LK +  P ++ Y  +++
Sbjct: 419 ALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIK 478

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           G+C +G+   A RV   MK  G QP+ ++Y+ +I   C+  ++  A  +F EM++ G  P
Sbjct: 479 GYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCP 538

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N +T+  L+  + K  + +   ++  +MKR GC  +  TYN LI    K      A ++ 
Sbjct: 539 NEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 598

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ +  +P+  T++ +   +   G +  A  M+ KM    C PN  TY+ L+Q     
Sbjct: 599 KVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQE 658

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +   ++  E+++  + P+  TY  +I +    G  + A+ ++ EMI   C +P    
Sbjct: 659 GRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGC-QPTLQT 717

Query: 501 YEMVLQQLR 509
           Y+++++ L+
Sbjct: 718 YDVLIKGLQ 726



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 158/333 (47%), Gaps = 8/333 (2%)

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS----LKDKFEPDVIVY 255
           AE   A N ++ +     K+      ++L +  + +   +  D     L++  +P++++Y
Sbjct: 172 AEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIY 231

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
            +++   C+ GN+ +AE +  ++  +G++P+ +TY+ +I   CR   +  A ++F  M E
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            GCEPN+ T++ L+     + R  + L   ++M R G      T+   I   C  G++ED
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIED 351

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A K+   M +KGC PN  T+  +   IS       A  ++ +M      PNTVTYN LM 
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSL---ISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMN 408

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           +   +   D  L +   M ++   PN ++Y  LI  YC +G    A   +  M++ +   
Sbjct: 409 VLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP-T 467

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           P    Y ++++    +G       ++E M   G
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG 500



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 161/364 (44%), Gaps = 17/364 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K  + D A   ++ MK       V T+++L+    +    + A      M 
Sbjct: 543 YTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVML 602

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           E   +PD + +S VI+ LC       A   F+ + K    P++  Y++L++   + G + 
Sbjct: 603 EEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVE 662

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE +F E+K  G+ P+  TY  +I+     G++ RA D   EM+  GC+P   T++   
Sbjct: 663 EAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYD--- 719

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS-MVRKGC 388
            V +K  + E    VY+++  L   A T T++  I         +D I VL+S +     
Sbjct: 720 -VLIKGLQNE---MVYHKLVALPNAASTSTFDDQIIN-------KDVISVLSSKLAELDF 768

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             +   ++ +   +S+ G    A+ +Y  M      PN  TY   +     +   D+ + 
Sbjct: 769 ELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMD 828

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           + K M +   E ++  Y+ LI   C + H     +++ E +  + L     V+ +++  L
Sbjct: 829 VFKHMSDQRCELHLTGYKELICTLCQL-HRRKEARFVFEKMLSRALNADEIVWTILINGL 887

Query: 509 RRAG 512
             AG
Sbjct: 888 LGAG 891



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 20/254 (7%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH----AF 206
           Y +MI +     + D A+ F+  M +   + T+ T+ +L++     GL  E V+    A 
Sbjct: 683 YVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIK-----GLQNEMVYHKLVAL 737

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
                     D+I    VIS+L  K    +           FE    +Y  L+    R+G
Sbjct: 738 PNAASTSTFDDQIINKDVISVLSSKLAELD-----------FELSRQLYDALLSRLSRSG 786

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              EA  ++R M      PN  TY   + +L R  ++  A DVF  M +  CE +   + 
Sbjct: 787 RWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYK 846

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    +  R ++   V+ +M      AD I +  LI+     G  +  ++ L+ M   
Sbjct: 847 ELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETN 906

Query: 387 GCNPNASTFNMIFR 400
             NP++    ++ R
Sbjct: 907 RRNPSSHARTILAR 920


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 127/543 (23%), Positives = 256/543 (47%), Gaps = 33/543 (6%)

Query: 14  LSQQIPKAYSFFSSLAPLNEDDDGDCVT-NPNSSPDTPFLSPEETLI----SEKFHSLIK 68
           L   I  +Y+ FSS  P+   D     T +PN+S D+P +   ++L+    S ++H LIK
Sbjct: 17  LKPSILISYAHFSS-TPIPIIDHLHAETLHPNASTDSPLVITHQSLLDSIQSSQWH-LIK 74

Query: 69  DHHRKNPNPSSNSNPSLN----PDFTIPSLS-LGFSQIS----------TAHSISPSTVR 113
            H   N +PS  S   L+     D  +  ++ +GF  +            + S SP +  
Sbjct: 75  -HLAPNLSPSLISATLLSLHKKSDLALQFVTHIGFKGLDIKTKCLAVAVVSRSPSPKSTL 133

Query: 114 HVIEKSCGVR-HGIPLLQVLSFFNWVTARPEF-VHSPDLYHEMINLAGKVRQFDLAWHFI 171
           H+++++   R  G+  +    F      R      S  ++  +I    ++++ D A+   
Sbjct: 134 HLLKQTIESRVAGVKDV----FHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECF 189

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D+MK + V   ++TF+ ++  +++          +  M           F+I+I++LC++
Sbjct: 190 DMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKE 249

Query: 232 RRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
            +  +A+ F  S+++   +P+V+ Y  ++ G+C  G +  A  V   MK  G++P+ YTY
Sbjct: 250 GKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTY 309

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
             +I  +C+ G++  A  +  +M E+G  P ++T+N L+  +       K     ++M R
Sbjct: 310 GSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVR 369

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                   TYN LI     +GK+++A  ++  M   G  P++ T+N++     + G+   
Sbjct: 370 RAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKK 429

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  ++ +M     +P  VTY  L+ + +          L +++      P++  +  LI 
Sbjct: 430 AFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID 489

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +C  G+ + A+  ++EM +++ + P    Y  ++Q   R G++++  EL+++M  RG  
Sbjct: 490 GHCANGNLDRAFALLKEM-DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGI- 547

Query: 531 ARP 533
            RP
Sbjct: 548 -RP 549



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 188/416 (45%), Gaps = 37/416 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ M++L  K+ Q +  W     M    ++ TV TF+I++    + G   +A      ME
Sbjct: 204 FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME 263

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + ++ VI   C + R   A+   D +K++  EPD   Y +L+ G C+ G + 
Sbjct: 264 NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLE 323

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA----------------------- 306
           EA  +  +MK  G+ P   TY+ +ID  C  G + +A                       
Sbjct: 324 EASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLI 383

Query: 307 HDVFAE------------MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           H +F E            M + G  P+SIT+N L+  + +    +K   ++++M   G +
Sbjct: 384 HALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQ 443

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
              +TY  LI    K  +++ A  +   ++R+G +P+   FN +       G+++ A  +
Sbjct: 444 PTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFAL 503

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +M      P+ VTYN LMQ        +   +L KEM+   + P+  +Y  LI+ Y  
Sbjct: 504 LKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSK 563

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            G  N+A+  IR+ +      P    Y  ++Q L +  Q    EEL+++MV +G T
Sbjct: 564 RGDINDAFT-IRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGIT 618



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 168/346 (48%), Gaps = 2/346 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D+MK+R VE    T+  L+    + G   EA     +M+E G  P  + ++ +I 
Sbjct: 290 ARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLID 349

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C K    +A  + D + +    P V  Y  L+      G + EA+ + ++M  +GI P
Sbjct: 350 GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVP 409

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  TY+I+I+  CRCG   +A ++  EM+  G +P  +T+ +L+ V  K +R +    ++
Sbjct: 410 DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLF 469

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            ++ R G   D I +N LID HC +G L+ A  +L  M ++   P+  T+N + +   + 
Sbjct: 470 EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCRE 529

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V  A  +  +MK     P+ ++YN L+  ++     +    ++ EM      P + TY
Sbjct: 530 GKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTY 589

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
             LI   C     + A + ++EM+  K + P  S Y  +++ + + 
Sbjct: 590 NALIQGLCKNQQGDLAEELLKEMV-SKGITPDDSTYFSLIEGIGKV 634



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 1/228 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++IL+  Y R G A +A +  + M   G  P  + ++ +I +L ++ R   A   F+ +
Sbjct: 413 TYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKI 472

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++   PD+I++  L+ G C  GN+  A  + +EM    I P+  TY+ ++   CR G++
Sbjct: 473 IREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKV 532

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A ++  EM   G  P+ I++N L+  + K         + ++M  +G     +TYN L
Sbjct: 533 EEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNAL 592

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           I   CK+ + + A ++L  MV KG  P+ ST+  +   I K+ D + A
Sbjct: 593 IQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 10/191 (5%)

Query: 128 LLQVLSFFNWVTARPEFVH-------SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRN 178
           L+ VLS  N + A  +          SPDL  ++ +I+        D A+  +  M  RN
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           +     T++ L++   R G   EA      M+  G  PD I+++ +IS   ++   ++A 
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAF 571

Query: 239 SFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           +  D  L   F P ++ Y  L++G C+      AE + +EM   GI P+  TY  +I+ +
Sbjct: 572 TIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631

Query: 298 CRCGQITRAHD 308
            +    + A D
Sbjct: 632 GKVDDSSEASD 642


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 172/340 (50%), Gaps = 2/340 (0%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R+ D+A      +K+  +     T++I ++ + R G  AEA+  F  MEE G  P+  ++
Sbjct: 198 RKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSY 257

Query: 222 SIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           +  I  LC   R+    +   D +  K   DV  YT ++RG+C    + EAE + REM+ 
Sbjct: 258 TTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEK 317

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P+VY Y  +I   C  G + +A  +  EM+  G + N +  +++++   +     +
Sbjct: 318 QGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASE 377

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           V   + + K++G   D   YN ++D  CK GK+E+A+++L  M  K   P+   +  +  
Sbjct: 378 VANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVIS 437

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
                G V  A  +Y +MKD+  +P+ VTYN+L   F+ +  T   L L   ME   V+P
Sbjct: 438 GYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKP 497

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
           +  T+ ++I   C  G  ++A  +  + +EEKCL+  S++
Sbjct: 498 DTVTHNMIIEGLCIGGKVDDAQAFF-DNLEEKCLENYSAM 536



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 158/329 (48%), Gaps = 19/329 (5%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++L   + R GL  EA+   N ME  G  PD +  +++I  LC   +  +AQ+FFD+L
Sbjct: 466 TYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL 525

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           ++K   +   Y+ +V G+C A ++++A  +   +   G      ++  ++  LC  G   
Sbjct: 526 EEKCLEN---YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSE 582

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A  +   M+ +   P  I ++ ++    +A   EK   V+N +   G   D ITY  +I
Sbjct: 583 KALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMI 642

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG---------------DVN 409
           + +C+  K+++A  VL  M  +G  P+  T+ ++    SK+                ++ 
Sbjct: 643 NGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMM 702

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
               ++ +MKD+  +P+ + Y +L+     + +    + L  EM +  + P+  TY  L+
Sbjct: 703 DPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALL 762

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
           + YC +G+   A     EM+  K ++P +
Sbjct: 763 SGYCNVGNIKKAVVLFDEML-NKGIRPDA 790



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/432 (21%), Positives = 184/432 (42%), Gaps = 48/432 (11%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+Y     ++G     +L  A    D M S+ V+      S +++   + G+A+E  +
Sbjct: 321 APDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVAN 380

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F   ++ G   D+  +++V+  LC+  +  EA      +K K   PD+I YT ++ G+ 
Sbjct: 381 QFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYF 440

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G + +A  ++REMK  G +P++ TY+++     R G    A  +   M   G +P+++
Sbjct: 441 LKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTV 500

Query: 324 TFNNLMRVHVKASRT-----------EKVLQVYNQMKRLGCEADTITYNF---------- 362
           T N ++       +            EK L+ Y+ M    CEA+ +   F          
Sbjct: 501 THNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQG 560

Query: 363 ----------LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                     L+   C +G  E A+ +L +MV    NP    ++ +   + + G++  A 
Sbjct: 561 RILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQ 620

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  + D    P+ +TY I++  +           +  +M+   +EP+V TY +L+   
Sbjct: 621 YVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNC 680

Query: 473 CGMGHWN-----NAYKYIREMIEEKCL---------KPGSSVYEMVLQQLRRAGQLQKHE 518
             +   +     +A K    M++   L         KP    Y +++ +  +   +Q   
Sbjct: 681 SKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAI 740

Query: 519 ELVEKMVDRGFT 530
            L  +M+DRG  
Sbjct: 741 NLFNEMIDRGLA 752



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 167/343 (48%), Gaps = 26/343 (7%)

Query: 109 PSTVRHVIEKSCGVRHGIP--LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           P  V + +      R+G+    L +L++      +P+ V + ++  E + + GKV   D 
Sbjct: 462 PDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTV-THNMIIEGLCIGGKV---DD 517

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F D ++ + +E     +S +V  Y  A    +A     R+ + G    K +F  ++ 
Sbjct: 518 AQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLG 573

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC +  + +A    +++      P +I+Y+ ++    +AG + +A+ VF  +   G+ P
Sbjct: 574 NLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAP 633

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF----NNLMRVHVK------- 334
           +V TY+I+I+  CR  ++  A  V  +M   G EP+ IT+    NN  ++ ++       
Sbjct: 634 DVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLD 693

Query: 335 ASRTEKVLQ----VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
           A ++++ +     ++++MK +  + D I Y  LID HCK   ++DAI + N M+ +G  P
Sbjct: 694 AMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAP 753

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +  T+  +      +G++  A  ++ +M +    P+  T ++L
Sbjct: 754 DTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 27/323 (8%)

Query: 105 HSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
             + P TV H  +IE  C    G  +    +FF+ +  +       + Y  M+N   +  
Sbjct: 493 QGVKPDTVTHNMIIEGLC---IGGKVDDAQAFFDNLEEK-----CLENYSAMVNGYCEAN 544

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
             + A+  +  +  +   +   +F  L+      G + +A+     M      P  I +S
Sbjct: 545 HVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYS 604

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            VI  L +     +AQ  F+ L D+   PDVI YT ++ G+CR   + EA  V  +MK  
Sbjct: 605 KVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNR 664

Query: 282 GIQPNVYTYSIVI---------------DALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
           GI+P+V TY++++               DA+     +     +++EM ++  +P+ I + 
Sbjct: 665 GIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYT 724

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+  H K +  +  + ++N+M   G   DT+TY  L+  +C  G ++ A+ + + M+ K
Sbjct: 725 VLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNK 784

Query: 387 GCNPNASTFNMIFRCISKLGDVN 409
           G  P+A T + +  CI K+  V+
Sbjct: 785 GIRPDAHTMS-VLHCILKVRKVH 806



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 147/365 (40%), Gaps = 44/365 (12%)

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--------KFEPDVIVYTNL 258
           N  E  G      +FS+++ +     +   A   FD   D         F P ++    L
Sbjct: 131 NLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFL 190

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +     +  +  A  ++R++K  G+ PN YTY+I I   CR G +  A DVF +M E G 
Sbjct: 191 MNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGV 250

Query: 319 EPNSITFNNLMR---VHVKASRTEKVLQ-------------------------------- 343
            PNS ++   +    +H ++    KVLQ                                
Sbjct: 251 TPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAES 310

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           +  +M++ G   D   Y  LI  +C  G L  A+ + + MV KG   N    + I + +S
Sbjct: 311 ILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLS 370

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           ++G  +     + + K +    +   YN++M         +  ++L  EM+  ++ P++ 
Sbjct: 371 QMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDII 430

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
            Y  +I+ Y   G   +A    REM ++   KP    Y ++     R G  Q+   L+  
Sbjct: 431 NYTTVISGYFLKGKVVDALNIYREM-KDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNY 489

Query: 524 MVDRG 528
           M  +G
Sbjct: 490 METQG 494



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/282 (20%), Positives = 122/282 (43%), Gaps = 23/282 (8%)

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE------------- 315
           S A   F ++K +G   + YTY+ ++  LC  G   +   +  E+++             
Sbjct: 74  SLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLF 133

Query: 316 ------VGCEPNSITF---NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
                 +  E  S+     + L++V V +   ++   V  Q K  G     ++ NFL++ 
Sbjct: 134 EALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNR 193

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
             +  K++ AI +   +   G NPN  T+ +  +   + G++  A  ++  M++    PN
Sbjct: 194 LVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPN 253

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           + +Y   ++       +D+  K+ +++   ++  +V  Y ++I  +C       A   +R
Sbjct: 254 SFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILR 313

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           EM E++   P   VY  ++      G L K   L ++MV +G
Sbjct: 314 EM-EKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKG 354


>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 505

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 216/446 (48%), Gaps = 26/446 (5%)

Query: 81  SNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTA 140
           SN   +P FT+ SL    ++  +      S++ +    S  ++ G   L VL +FN +  
Sbjct: 53  SNRISSPFFTVSSLLENLTEPISIPCPKISSLLYESIISVYIQSGSIELAVL-YFNQMVD 111

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +   V  P++++ +++   K + F+  W   + +K + +E+ V T+ I+++    AG+  
Sbjct: 112 KG-LVFEPNIFNTLLDSLVKSKCFEKLWFVFNEVKGK-IELDVYTYGIMIKGCCEAGVFY 169

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
           +       +E+ G +P+ + ++ +I   C+      A+  F+ + +     +   YT L+
Sbjct: 170 KGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLI 229

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+ + G   +   +F +M++ G+ PN+YTY+ +I+  C  G++ +A+++F EM + G  
Sbjct: 230 NGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVV 289

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG---------------------CEADTI 358
            N +T+N L+    + +R  +  ++ +QMKR G                          +
Sbjct: 290 SNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKV 349

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  L + H + G +E A    +SM + G  P+   + ++   +   G++  A +++  M
Sbjct: 350 TYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSM 409

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
            ++K EPN V YN ++  +  + ++   L+  KEME+  + PNV +Y   I + C  G W
Sbjct: 410 AEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKW 469

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMV 504
             A   + +M     L+P  S+Y ++
Sbjct: 470 QEAEILLNKM-RGSGLEPSVSIYNII 494



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 175/397 (44%), Gaps = 57/397 (14%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++  Y+++G    AV  FN+M + G   +   F+ ++  L + +   +    F+ +K K 
Sbjct: 89  IISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFNEVKGKI 148

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           E DV  Y  +++G C AG   +   +  +++  G+ PNV  Y+ +ID  C+ G + RA  
Sbjct: 149 ELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKL 208

Query: 309 VFAEMLEV-----------------------------------GCEPNSITFNNLMRVHV 333
           +F +M EV                                   G  PN  T+N ++    
Sbjct: 209 LFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFC 268

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-------- 385
              +  K  +++++M + G  ++ +TYN LI   C+  ++ +A K+++ M R        
Sbjct: 269 NEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGN 328

Query: 386 -------------KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
                        +G +P+  T+ ++     +LGD+  A   Y  M+ +   P+   Y +
Sbjct: 329 WVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGV 388

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+       +     KL + M E ++EPN   Y  +I  YC  G+   A ++++EM E+K
Sbjct: 389 LLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEM-EDK 447

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            L P  + Y   +  L + G+ Q+ E L+ KM   G 
Sbjct: 448 RLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGL 484



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 36/159 (22%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+ R +  +  T++IL   +VR G   +A H ++ ME+ G  PD   + +++  LC K  
Sbjct: 339 MEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGN 398

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGN------------------------- 267
             EA   F S+ + K EP+ +VY  ++ G+C+AGN                         
Sbjct: 399 MKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSS 458

Query: 268 ----------ISEAERVFREMKMAGIQPNVYTYSIVIDA 296
                       EAE +  +M+ +G++P+V  Y+I+  A
Sbjct: 459 TIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYNIISKA 497


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 172/335 (51%), Gaps = 2/335 (0%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
           +A+   + M + GC PD + +++V++ +C++ R  +A  F  +L     EP+ + Y  ++
Sbjct: 10  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           +G C A    +AE +  EM   G  PNV T++++I  LCR G +  A +V  ++ + GC 
Sbjct: 70  KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 129

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PNS+++N L+    K  + +K +   + M   GC  D ++YN L+   C+ G+++ A+++
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 189

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L+ +  KGC P   ++N +   ++K G    A  +  +M     +P+ +TY+ +      
Sbjct: 190 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 249

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
               +  ++   ++++  + PN   Y  +I   C     ++A      MI   C+ P  S
Sbjct: 250 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM-PNES 308

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            Y ++++ L   G +++  +L++++  RG   + L
Sbjct: 309 TYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 343



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 167/331 (50%), Gaps = 5/331 (1%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           +  A   +D M+ +     + T++++V    + G   +A+     +  YGC P+ ++++I
Sbjct: 8   YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 67

Query: 224 VISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           V+  LC   R  +A+     +  K   P+V+ +  L+   CR G +  A  V  ++   G
Sbjct: 68  VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             PN  +Y+ ++ A C+  ++ +A      M+  GC P+ +++N L+    ++   +  +
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           ++ +Q+K  GC    I+YN +ID   K GK ++A+++LN MV KG  P+  T++ I   +
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            +   +  A R +GK++D+   PNTV YN ++      + T   + L   M  N   PN 
Sbjct: 248 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 307

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +TY ILI    G+  +    K  R++++E C
Sbjct: 308 STYTILIE---GLA-YEGLIKEARDLLDELC 334



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 152/301 (50%), Gaps = 2/301 (0%)

Query: 229 CRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C++    +A    D ++DK   PD++ Y  +V G C+ G + +A    + +   G +PN 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            +Y+IV+  LC   +   A ++  EM + GC PN +TFN L+    +    E  L+V  Q
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           + + GC  ++++YN L+   CK  K++ A+  L+ MV +GC P+  ++N +   + + G+
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V+ A  +  ++KD  C P  ++YN ++     +  T   L+L  EM    ++P++ TY  
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +    C      +A +   + +++  ++P + +Y  ++  L +  +     +L   M+  
Sbjct: 243 IAAGLCREDRIEDAIRAFGK-VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 301

Query: 528 G 528
           G
Sbjct: 302 G 302



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 148/295 (50%), Gaps = 3/295 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ ++N   +  + D A  F+  + S   E    +++I+++    A    +A  
Sbjct: 24  TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEE 83

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               M + GC P+ + F+++IS LCRK     A    + + K    P+ + Y  L+  +C
Sbjct: 84  LMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFC 143

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   + +A      M   G  P++ +Y+ ++ ALCR G++  A ++  ++ + GC P  I
Sbjct: 144 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 203

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++N ++    KA +T++ L++ N+M   G + D ITY+ +    C++ ++EDAI+    +
Sbjct: 204 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 263

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
              G  PN   +N I   + K  + + A  ++  M    C PN  TY IL++  A
Sbjct: 264 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 318



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 117/234 (50%), Gaps = 1/234 (0%)

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           A C+     +A  +  EM + GC P+ +T+N ++    +  R +  ++    +   GCE 
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           +T++YN ++   C   + EDA +++  M +KGC PN  TFNM+   + + G V  A  + 
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            ++    C PN+++YN L+  F   K  D  +     M      P++ +Y  L+T  C  
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G  + A + + ++ ++ C  P    Y  V+  L +AG+ ++  EL+ +MV +G 
Sbjct: 181 GEVDVAVELLHQLKDKGC-APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 233



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 46/249 (18%)

Query: 123 RHGI--PLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRN 178
           R G+  P L+VL         P++  +P+   Y+ +++   K ++ D A  F+DLM SR 
Sbjct: 109 RKGLVEPALEVLEQI------PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 162

Query: 179 VEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
               + +++ L+    R+G    AV   +++++ GCAP  I+++ VI  L +  +  EA 
Sbjct: 163 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 222

Query: 239 SFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY--------- 288
              + +  K  +PD+I Y+ +  G CR   I +A R F +++  GI+PN           
Sbjct: 223 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 282

Query: 289 --------------------------TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
                                     TY+I+I+ L   G I  A D+  E+   G    S
Sbjct: 283 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKS 342

Query: 323 ITFNNLMRV 331
           +     +R+
Sbjct: 343 LINKGAIRL 351


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 177/378 (46%), Gaps = 2/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   +   F  A+  ++ M +R    T+ T++ L+    +          F+ M 
Sbjct: 288 YNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDML 347

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    PD ++F+ ++   CR    SEA   FD LK +   P VI Y  L+ G C  G + 
Sbjct: 348 KSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLD 407

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+ +EM   G+ P+++TY+I+++   + G ++ A   F EML  G +P+   +N  +
Sbjct: 408 AALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRI 467

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              +K + T     +  +M   G   D ITYN  +   C+ G  E+A  +L +MV  G  
Sbjct: 468 VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLI 527

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  I     K G +  A  ++ +M      P+ VTY +L+   A  +  D+    
Sbjct: 528 PDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMY 587

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M E  V  NV TY  +I   C     + AYKY  EM EEK + P    Y +++ +  
Sbjct: 588 FSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEM-EEKGILPNKFSYTILINESC 646

Query: 510 RAGQLQKHEELVEKMVDR 527
             G  ++   L  +M+DR
Sbjct: 647 NMGYWEEALRLYREMLDR 664



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 169/357 (47%), Gaps = 2/357 (0%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           +M+   ++ TV T++ ++  Y + G   +A+   + M+E GC P+ + ++++++ L +K 
Sbjct: 205 MMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKG 264

Query: 233 RASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
              +A+   +  L          Y  L+ G+C+ G   EA  +  EM      P + TY+
Sbjct: 265 ELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYN 324

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            ++  LC+  Q+T     F++ML+    P+ ++FN+L+  + +     +   +++++K  
Sbjct: 325 TLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR 384

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
                 ITYN LI   C  G L+ A+++   M  +G  P+  T+ ++     KLG V+ A
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA 444

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              + +M     +P+   YN  +        T +   +++EM      P+V TY + +  
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHA 504

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C  G++  A   +  M+ +  L P    Y  ++    + G L+K  E+  +M+ +G
Sbjct: 505 LCQQGNFEEACDLLENMVSDG-LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG 560



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 8/276 (2%)

Query: 168 WHFIDLMKSRNVEIT-------VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
           W ++D       E+T       + T++ILV    + G  + A   FN M   G  PD+ A
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 221 FSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++  I    +    S A S  +  L   F PDVI Y   V   C+ GN  EA  +   M 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             G+ P+  TY+ +I+   + G + +A +VF EML  G  P+ +T+  L+  H      +
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
                +++M      A+ ITYN +I+  C   ++++A K  + M  KG  PN  ++ ++ 
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
                +G    A R+Y +M D K +P++ T+++ ++
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLK 678



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 172/398 (43%), Gaps = 44/398 (11%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF WV A+P+F  S  ++  ++++         A+  ++ + S  +   VD   +L+ 
Sbjct: 103 LRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVD---VLIA 159

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
            +V   L       F++M   G  PD                          L+D+    
Sbjct: 160 GHVXCLLV------FDKMIRNGLLPD----------------VKNCNRILRVLRDE---- 193

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
                NL         +S+A+ V+  M+  GI+P V TY+ ++D+ C+ G++ +A ++ +
Sbjct: 194 -----NL---------LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLS 239

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM E GC PN +T+N L+    K    E+   +  +M   G      TYN LI+  C+ G
Sbjct: 240 EMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKG 299

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
              +A  ++  MV +   P  ST+N +   + K   V G    +  M   K  P+ V++N
Sbjct: 300 LFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFN 359

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            L+  +  +        L  E++  ++ P V TY  LI   C  G+ + A +  +EM ++
Sbjct: 360 SLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ 419

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             L P    Y +++    + G +        +M+ +G 
Sbjct: 420 G-LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE-AQSFFDS 243
            F ++V+   R  L  +A+   N  + YG  P  ++++ ++  + R +++ + A+  F  
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 244 L-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + +    P+V  Y  L+RG+C AGN+      F EM+  G  PNV TY+ +IDA C+  +
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           I  A  +   M   G  PN I++N ++    +  + ++  ++  +M +     D +T+N 
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI+ +C  G    A+ +   MV+ G +PN  T+  +   + K G++N A     +M+D  
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             PN  TY  L+  F+         ++ KEM EN   P + TY  LI  +C +G   +A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             ++EMIE   + P    Y  ++    R  +L+K  +L  +MV +G +
Sbjct: 434 GLLQEMIERGFI-PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 182/382 (47%), Gaps = 4/382 (1%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++Y   I + G       ++   F   M+       V T++ ++  Y +     EA  
Sbjct: 200 SPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFK 259

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               M   G  P+ I++++VI+ LCR+ +  E     + + K ++ PD + +  L+ G+C
Sbjct: 260 LLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC 319

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             GN  +A  +  EM   G+ PNV TY+ +I+++C+ G + RA +   +M + G  PN  
Sbjct: 320 NVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGR 379

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+    +    ++  Q+  +M   G     ITYN LI+ HC  G++EDA  +L  M
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM 439

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + +G  P+  +++ I     +  ++  A ++  +M      P+  TY+ L+Q     +  
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
             V  L +EM    + P+  TY  LI  YC  G  + A +   EMI +K   P    Y +
Sbjct: 500 GEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI-QKGFSPDIVTYNV 558

Query: 504 VLQQLRRAGQLQKHEELVEKMV 525
           ++    +  + ++ + L+ K++
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLL 580



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 190/425 (44%), Gaps = 6/425 (1%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ-FDL 166
           S S V  ++ KSC   + I   + LS  N   +   F+     Y+ +++   + +Q   +
Sbjct: 130 SSSAVFDLVVKSCARVNLIN--KALSIVNLAKSYG-FMPGVLSYNAILDAVIRTKQSVKI 186

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A      M    V   V T++IL+R +  AG     +  F  ME  GC P+ + ++ +I 
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C+ R+  EA      +  K   P++I Y  ++ G CR G + E   +  EM      P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  T++ +I+  C  G   +A  + AEM++ G  PN +T+  L+    KA    + ++  
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           +QM+  G   +  TY  LID   + G L+ A +++  MV  G  P   T+N +      L
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A  +  +M +    P+ V+Y+ ++  F  ++  +   +LK EM    + P+V TY
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             LI   C            +EM+    L P    Y  ++      G L K   L ++M+
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLG-LPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 526 DRGFT 530
            +GF+
Sbjct: 546 QKGFS 550



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 167/333 (50%), Gaps = 11/333 (3%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTNL 258
           A+H   R + Y  A   +A  +V++ +         +  F  LK+ +   +    V+  +
Sbjct: 85  ALHILTRYKLYKTA-QSLAEEVVVNTV-----DETGEDLFQCLKNSYYQCKSSSAVFDLV 138

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR-AHDVFAEMLEVG 317
           V+   R   I++A  +    K  G  P V +Y+ ++DA+ R  Q  + A  +F EM+E G
Sbjct: 139 VKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESG 198

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN  T+N L+R    A   E  L  + +M+R GC  + +TYN +ID +CK  K+ +A 
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K+L  M  KG NPN  ++N++   + + G +     +  +M   +  P+ VT+N L+  +
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
               +    L L  EM +N + PNV TY  LI   C  G+ N A +++ +M  ++ L P 
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM-RDRGLHPN 377

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
              Y  ++    + G L++  +++++MV+ GFT
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 188/395 (47%), Gaps = 17/395 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K+R+   A+  + LM  + +   + ++++++    R G   E       M 
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +    PD++ F+ +I+  C      +A     + +K+   P+V+ YT L+   C+AGN++
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A     +M+  G+ PN  TY+ +ID   + G + +A+ +  EM+E G  P  IT+N L+
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             H    R E    +  +M   G   D ++Y+ +I   C++ +LE A ++   MV KG +
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ +T++ + + + K   +     ++ +M  L   P+ VTY  L+  +      D  L+L
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ--- 506
             EM +    P++ TY +LI  +        A + + +++ E+ + P    Y  ++    
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCN 599

Query: 507 --QLRRA----------GQLQKHEELVEKMVDRGF 529
             + + A          G + + + ++E M+ +G+
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGY 634



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 53/336 (15%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y  +IN   K    + A  F+D M+ R +     T++ L+  + + G   +A  
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M E G  P  I ++ +I+  C   R  +A      + ++ F PDV+ Y+ ++ G+C
Sbjct: 400 IMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC 459

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R   + +A ++  EM   GI P+V TYS +I  LC+  ++    D+F EML +G  P+ +
Sbjct: 460 RNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID------------------ 365
           T+ +L+  +      +K L+++++M + G   D +TYN LI+                  
Sbjct: 520 TYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579

Query: 366 ------------------CH--------------CKDGKLEDAIKVLNSMVRKGCNPNAS 393
                             C+              C  G + +A +VL SM++KG   N  
Sbjct: 580 LYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEE 639

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            +N+I    SK+G++  A+ +Y +M      P++VT
Sbjct: 640 VYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 22/268 (8%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I    K R+          M S  +     T++ L+  Y   G   +A+ 
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE---PDVIVYTNLV-- 259
             + M + G +PD + ++++I+   ++ R  EA+     LK  +E   P+ I Y  L+  
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLLYEESVPNEITYNTLIDN 597

Query: 260 -------------RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
                        +G+C  G ++EA+RV   M   G + N   Y+++I    + G I +A
Sbjct: 598 CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKA 657

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           ++++ EML  G  P+S+T   L +      +  ++ Q+ +   +     +      LI  
Sbjct: 658 YNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGI 717

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           + K+G ++    VL  M   G  P +S 
Sbjct: 718 NSKEGNMDAVFNVLKDMALSGLLPYSSA 745



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 21/292 (7%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+   + ++ + A+     M ++ +   V T+S L++   +     E    
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M   G  PD++ ++ +I+  C +    +A    D +  K F PD++ Y  L+ G+ +
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVID---------------ALCRCGQITRAHDV 309
                EA+R+  ++      PN  TY+ +ID                 C  G +  A  V
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              ML+ G + N   +N ++  H K    EK   +Y +M   G    ++T   L      
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYH 685

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           +GK  +  ++L+  ++      A+   ++    SK G+++    ++  +KD+
Sbjct: 686 EGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDA---VFNVLKDM 734


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 175/337 (51%), Gaps = 2/337 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+        A+EAV   +RM + GC P+ + + +V++ LC++     A +  + +
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +  K E DV+++  ++   C+  ++ +A  +F+EM+  GI+PNV TYS +I  LC  G+ 
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  + ++M+E    PN +TFN L+   VK  +  +  ++Y+ M +   + D  TYN L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++  C   +L+ A ++   MV K C P+  T+N + +   K   V     ++ +M     
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             +TVTY  L+Q        D   K+ K+M  + V P++ TY IL+   C  G    A +
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            + + +++  +K    +Y  +++ + +AG++    +L
Sbjct: 492 -VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 189/385 (49%), Gaps = 2/385 (0%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R E VH    Y+ +IN   +  Q  LA   +  M     E ++ T S L+  Y      +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLV 259
           +AV   ++M E G  PD I F+ +I  L    +ASEA +  D +  +  +P+++ Y  +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C+ G+   A  +  +M+ A I+ +V  ++ +ID+LC+   +  A ++F EM   G  
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN +T+++L+       R     Q+ + M       + +T+N LID   K+GK  +A K+
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + M+++  +P+  T+N +         ++ A +M+  M    C P+ VTYN L++ F  
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           SK  +   +L +EM    +  +  TY  LI      G  +NA K  ++M+ +  + P   
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIM 471

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
            Y ++L  L   G+L+K  E+ + M
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYM 496



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 204/456 (44%), Gaps = 13/456 (2%)

Query: 76  NPSSNSNPSLNPDFTIPSLSL-GFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSF 134
           N     NP + P     S+ L G      A S      R ++       H + L   +  
Sbjct: 20  NLQGKGNPRIAP----SSIDLCGMCYWGRAFSSGSGDYREILRNGL---HDMKLDDAIGL 72

Query: 135 FN-WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F   V +RP  + S   ++++++   K+++FD+     + M+   +   + T++IL+  +
Sbjct: 73  FGGMVKSRP--LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
            R    + A+    +M + G  P  +  S +++  C  +R S+A +  D + +  + PD 
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I +T L+ G       SEA  +   M   G QPN+ TY +V++ LC+ G    A ++  +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M     E + + FN ++    K    +  L ++ +M+  G   + +TY+ LI C C  G+
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             DA ++L+ M+ K  NPN  TFN +     K G    A ++Y  M     +P+  TYN 
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F      D   ++ + M   +  P+V TY  LI  +C      +  +  REM   +
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHR 429

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L   +  Y  ++Q L   G     +++ ++MV  G
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 183/375 (48%), Gaps = 2/375 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K    DLA + ++ M++  +E  V  F+ ++    +     +A++ F  ME
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + +S +IS LC   R S+A Q   D ++ K  P+++ +  L+  + + G   
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE+++ +M    I P+++TY+ +++  C   ++ +A  +F  M+   C P+ +T+N L+
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   K+ R E   +++ +M   G   DT+TY  LI     DG  ++A KV   MV  G  
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++++   +   G +  A  ++  M+  + + +   Y  +++    +   D    L
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+PNV TY  +I+  C       AY  +++M E+  L P S  Y  +++   
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHL 586

Query: 510 RAGQLQKHEELVEKM 524
           R G      EL+ +M
Sbjct: 587 RDGDKAASAELIREM 601



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 165/359 (45%), Gaps = 7/359 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  RH    L +         RP  V     Y  +I+      ++  A   +  M
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVT----YSSLISCLCSYGRWSDASQLLSDM 321

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             + +   + TF+ L+  +V+ G   EA   ++ M +    PD   ++ +++  C   R 
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381

Query: 235 SEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            +A+  F+ +  KD F PDV+ Y  L++G+C++  + +   +FREM   G+  +  TY+ 
Sbjct: 382 DKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I  L   G    A  VF +M+  G  P+ +T++ L+       + EK L+V++ M++  
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + D   Y  +I+  CK GK++D   +  S+  KG  PN  T+N +   +     +  A+
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            +  KMK+    PN+ TYN L++            +L +EM       + +T  ++  M
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 619



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 3/153 (1%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    I L G      L  A    D M+   +++ +  ++ ++    +AG   +    
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
           F  +   G  P+ + ++ +IS LC KR   EA +    +K D   P+   Y  L+R   R
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
            G+ + +  + REM+      +  T  +V + L
Sbjct: 588 DGDKAASAELIREMRSCRFVGDASTIGLVANML 620


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 215/474 (45%), Gaps = 18/474 (3%)

Query: 61  EKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGF---------SQISTAHSISPST 111
           +K  SL+++  R  P    + +     DF I +  L           +  S    +SPS 
Sbjct: 2   KKLRSLLREISRAKPPWKQHFHTYSAVDFAISNEVLTIIDSVNPIEPALESKVPFLSPSI 61

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
           V ++I+       G        FF W  ++   + S   ++ +I++  K   F+L W  +
Sbjct: 62  VTYIIKNPPNSLLG------FRFFIW-ASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVL 114

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
             +K     I+ D F++L++ Y +  +  +AV +F  M+++ C PD   ++ V+ ++ RK
Sbjct: 115 KEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRK 174

Query: 232 RRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
                A   ++  LK    P++  ++ L+ G C++G    A ++F EM    I PN  TY
Sbjct: 175 EVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITY 234

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +I+I  LC+  +   A+ +F  M + GC P+S+T+N L+    K  R ++ L +    ++
Sbjct: 235 TIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEK 294

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
                D   Y+ LID   +  + EDA      M      P+   + ++ + +SK G    
Sbjct: 295 DRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKD 354

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A R+  +M +    P+T  YN L++ +      D    L  E+ +N+   +  TY ILI 
Sbjct: 355 ALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILIC 414

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             C  G   +A +   EM +  C  P    +  ++    +AG ++K + L  KM
Sbjct: 415 GMCRSGLVGDAQQIFNEMEKHGCY-PSVVTFNALIDGFCKAGNIEKAQLLFYKM 467



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 200/439 (45%), Gaps = 52/439 (11%)

Query: 143 EFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +F   PD+  Y+ ++++  +     LA    + M   N    + TFSIL+    ++G   
Sbjct: 154 DFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQ 213

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
            A+  F+ M +    P+KI ++I+IS LC+ ++A  A   F ++KD    PD + Y  L+
Sbjct: 214 NALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALL 273

Query: 260 RGWCRAGNISEA-----------------------------------ERVFREMKMAGIQ 284
            G+C+ G + EA                                   +  +R+M    I+
Sbjct: 274 HGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIK 333

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+V  Y+I++  L + G+   A  +  EM E G  P++  +N L++ +      ++   +
Sbjct: 334 PDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSL 393

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           + ++ +  C +   TY  LI   C+ G + DA ++ N M + GC P+  TFN +     K
Sbjct: 394 HLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCK 453

Query: 405 LGDVNGAHRMYGKMK---------DLKCEPNTVTYNILMQ-MFATSKSTDMVLK---LKK 451
            G++  A  ++ KM+          L    N V     +Q M      + ++LK   +  
Sbjct: 454 AGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILM 513

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           ++ ++   PN+ TY ILI  +C  G+ N A+K  +E+ + K L P S  Y  ++  L  A
Sbjct: 514 QLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKEL-QLKGLSPDSVTYGTLINGLLSA 572

Query: 512 GQLQKHEELVEKMVDRGFT 530
            + +    ++++++  G T
Sbjct: 573 NREEDAFTVLDQILKNGCT 591



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 171/391 (43%), Gaps = 53/391 (13%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   + ++ D+A+     MK         T++ L+  + + G   EA+      E
Sbjct: 234 YTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFE 293

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           +     DK  +S +I  L R RR  +AQ ++  + +   +PDVI+YT +++G  +AG   
Sbjct: 294 KDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFK 353

Query: 270 EAERVFREMKMAGIQPNVY-----------------------------------TYSIVI 294
           +A R+  EM   G+ P+ +                                   TY+I+I
Sbjct: 354 DALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILI 413

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK----- 349
             +CR G +  A  +F EM + GC P+ +TFN L+    KA   EK   ++ +M+     
Sbjct: 414 CGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNP 473

Query: 350 ----RLGCEA----DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
               RL   A    DT +   +++  C  G +  A  +L  +   G  PN  T+N++   
Sbjct: 474 SLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHG 533

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             K G++NGA +++ +++     P++VTY  L+    ++   +    +  ++ +N   P 
Sbjct: 534 FCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPI 593

Query: 462 VNTYRILITMYCGMGHWNNAY----KYIREM 488
              Y+  +T  C       A+    KY+R +
Sbjct: 594 TEVYKSFMTWSCRRNKITLAFSLWLKYLRSI 624



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 39/381 (10%)

Query: 103 TAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVR 162
           T H+I P  + + I    G+         L   N +T R   V     Y+ +I       
Sbjct: 328 TEHNIKPDVILYTIMMK-GLSKAGKFKDALRLLNEMTERG-LVPDTHCYNALIK-----G 380

Query: 163 QFDLAWHFIDLMKSRNVEITVD-------TFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
             DL    +D  KS ++EI+ +       T++IL+    R+GL  +A   FN ME++GC 
Sbjct: 381 YCDLG--LLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCY 438

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP--------------DVIVYTNLVRG 261
           P  + F+ +I   C+     +AQ  F  ++    P              D      +V  
Sbjct: 439 PSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQ 498

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C +G I +A  +  ++  +G  PN+ TY+I+I   C+ G I  A  +F E+   G  P+
Sbjct: 499 LCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPD 558

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           S+T+  L+   + A+R E    V +Q+ + GC   T  Y   +   C+  K+  A  +  
Sbjct: 559 SVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWL 618

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHR----MYGKMKDLKCEPNTVTYNILMQMF 437
             +R     ++     +     K G+V  A R    M  K+ D +  P    Y I +   
Sbjct: 619 KYLRSIPGRDSEVLKSVEENFEK-GEVEEAVRGLLEMDFKLNDFQLAP----YTIWLIGL 673

Query: 438 ATSKSTDMVLKLKKEMEENEV 458
             +   +  LK+   +EE+ V
Sbjct: 674 CQAGRLEEALKIFFTLEEHNV 694


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 181/378 (47%), Gaps = 1/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MI +  K  +   A      M++         ++ ++  Y  AG   +A     R+ 
Sbjct: 21  YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 80

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
           E GC P  ++F+ +++ L +KR+  EA S F+ +K   EP+   Y  ++   C  G + E
Sbjct: 81  ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 140

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A R+  EM+ A + PN+ T +I++D LC+  ++  A+ +F    + GC P+ +T+ +L+ 
Sbjct: 141 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 200

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              K  + ++  +++ +M   G  A+ + Y  LI      G+ ED  K+   ++R+GC P
Sbjct: 201 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKP 260

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           + +  N    C+ K G+V     ++  ++     P+  +Y+IL+     +        + 
Sbjct: 261 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 320

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
             M++     +   Y  ++  +C  G  + AY+ + EM +EKC++P  + Y  ++  L +
Sbjct: 321 HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM-KEKCVQPTVATYGAIVDGLAK 379

Query: 511 AGQLQKHEELVEKMVDRG 528
             +L +   L E+   +G
Sbjct: 380 IDRLDEAYMLFEEAKSKG 397



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 9/375 (2%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAW 168
           TV  ++++ C  R    L +    F   + R     +PD   Y  +I+  GK  Q D A+
Sbjct: 159 TVNIMVDRLCKARK---LEEAYKIFESASQRG---CNPDCVTYCSLIDGLGKKGQVDEAY 212

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
              + M           ++ L+R +   G   +    F  +   GC PD    +  +  +
Sbjct: 213 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCV 272

Query: 229 CRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            +     + +  F+ ++   F PDV  Y+ L+ G  +AG   E   +F  MK  G   + 
Sbjct: 273 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 332

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             Y+ V+D  C+ G++ +A+++  EM E   +P   T+  ++    K  R ++   ++ +
Sbjct: 333 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 392

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
            K  G E + + Y+ LID   K G++++A  +L  M++KG  PN  T+N +   + K  +
Sbjct: 393 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 452

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +N A   +  MK++KC PNT TY+IL+      +  +      ++M++  + PNV TY  
Sbjct: 453 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 512

Query: 468 LITMYCGMGHWNNAY 482
           +I+    +G+  +AY
Sbjct: 513 MISGLAKVGNITDAY 527



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 9/376 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ ++   GK R+ D A    ++MK ++ E    T++I++      G   EA    + ME
Sbjct: 91  FNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 149

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
                P+ +  +I++  LC+ R+  EA   F+S   +   PD + Y +L+ G  + G + 
Sbjct: 150 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 209

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA R+F +M  AG   N   Y+ +I      G+    H +F E++  GC+P+    N  M
Sbjct: 210 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYM 269

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA   EK   ++  ++  G   D  +Y+ LI    K G+  +   + ++M ++G  
Sbjct: 270 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 329

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +A  +N +     K G V+ A+ +  +MK+   +P   TY  ++   A     D    L
Sbjct: 330 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 389

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +E +   +E NV  Y  LI  +  +G  + AY  + EM+ +K L P    +  +L  L 
Sbjct: 390 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM-KKGLTPNVYTWNSLLDALV 448

Query: 510 RAGQLQKHEELVEKMV 525
           +A      EE+ E +V
Sbjct: 449 KA------EEINEALV 458



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 179/379 (47%), Gaps = 5/379 (1%)

Query: 153 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           +M+ L G+V +   A+  +D M+  ++   + T +I+V R  +A    EA   F    + 
Sbjct: 130 DMLCLGGRVEE---AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
           GC PD + +  +I  L +K +  EA   F+ + D     + +VYT+L+R +   G   + 
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            ++F+E+   G +P++   +  +D + + G++ +   +F ++   G  P+  +++ L+  
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 306

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             KA +  +   +++ MK+ G   D   YN ++D  CK GK+  A ++L  M  K   P 
Sbjct: 307 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 366

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
            +T+  I   ++K+  ++ A+ ++ + K    E N V Y+ L+  F      D    + +
Sbjct: 367 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 426

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM +  + PNV T+  L+         N A    + M E KC  P +  Y +++  L R 
Sbjct: 427 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC-PPNTYTYSILINGLCRV 485

Query: 512 GQLQKHEELVEKMVDRGFT 530
            +  K     + M  +G  
Sbjct: 486 QKYNKAFVFWQDMQKQGLV 504



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 149/294 (50%), Gaps = 9/294 (3%)

Query: 148 PDL-----YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           PDL     Y + +  AG+V +  + +  I   +S      V ++SIL+    +AG A E 
Sbjct: 260 PDLTLLNTYMDCVFKAGEVEKGRMIFEDI---RSYGFLPDVRSYSILIHGLTKAGQARET 316

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG 261
            + F+ M++ G A D  A++ V+   C+  +  +A    + +K+K  +P V  Y  +V G
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 376

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             +   + EA  +F E K  GI+ NV  YS +ID   + G+I  A+ +  EM++ G  PN
Sbjct: 377 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 436

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+N+L+   VKA    + L  +  MK + C  +T TY+ LI+  C+  K   A     
Sbjct: 437 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 496

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            M ++G  PN  T+  +   ++K+G++  A+ ++ + K     P+  ++N L++
Sbjct: 497 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 550



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 159/326 (48%), Gaps = 3/326 (0%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
           F+ ++  G  PD ++++ +I +LC+  R  EA+  F  ++ ++  P    Y  ++ G+  
Sbjct: 6   FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG   +A ++   ++  G  P+V +++ ++  L +  ++  A  +F E+++   EPNS T
Sbjct: 66  AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSST 124

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++ +     R E+  ++ ++M+      + +T N ++D  CK  KLE+A K+  S  
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           ++GCNP+  T+  +   + K G V+ A+R++ KM D     N V Y  L++ F      +
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 244

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              K+ KE+     +P++      +      G      + I E I      P    Y ++
Sbjct: 245 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG-RMIFEDIRSYGFLPDVRSYSIL 303

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L +AGQ ++   +   M  +GF 
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFA 329



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 144/294 (48%), Gaps = 3/294 (1%)

Query: 237 AQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A  FF  LK +  +PD + YT+++   C+AG + EAE +F +M+     P  Y Y+ +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
                G+   A+ +   + E GC P+ ++FN+++    K  + ++ L ++  MK+   E 
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEP 120

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           ++ TYN +ID  C  G++E+A ++L+ M      PN  T N++   + K   +  A++++
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
                  C P+ VTY  L+         D   +L ++M +     N   Y  LI  +   
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G   + +K  +E+I   C KP  ++    +  + +AG+++K   + E +   GF
Sbjct: 241 GRKEDGHKIFKELIRRGC-KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 293



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 4/288 (1%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI 253
           +AG   +    F  +  YG  PD  ++SI+I  L +  +A E  + F ++K + F  D  
Sbjct: 274 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 333

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y  +V G+C++G + +A  +  EMK   +QP V TY  ++D L +  ++  A+ +F E 
Sbjct: 334 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 393

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
              G E N + +++L+    K  R ++   +  +M + G   +  T+N L+D   K  ++
Sbjct: 394 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 453

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A+    SM    C PN  T++++   + ++   N A   +  M+     PN VTY  +
Sbjct: 454 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 513

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           +   A   +      L +  + N   P+  ++  LI    GM + N A
Sbjct: 514 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE---GMSNANRA 558



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 2/229 (0%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A   F E+   G +P+ +++ +++ V  KA R  +  +++ QM+          YN +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            +   G+ EDA K+L  +  +GC P+  +FN I  C+ K   V+ A  ++  MK    EP
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEP 120

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N+ TYNI++ M       +   ++  EME   + PN+ T  I++   C       AYK  
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
               +  C  P    Y  ++  L + GQ+ +   L EKM+D G  A P+
Sbjct: 181 ESASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 228



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 3/206 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA      M 
Sbjct: 370 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 429

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ ++  L +    +EA   F S+K+ K  P+   Y+ L+ G CR    +
Sbjct: 430 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 489

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   +++M+  G+ PNV TY+ +I  L + G IT A+ +F      G  P++ +FN L+
Sbjct: 490 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 549

Query: 330 RVHVKASRTEKVLQV--YNQMKRLGC 353
                A+R  +  Q    +   RL C
Sbjct: 550 EGMSNANRAMEAYQAGWLDTTMRLDC 575


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 183/383 (47%), Gaps = 38/383 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           T++ L+  Y + G+   A          G  PD+  +  +I+ LC+      A + F++ 
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L    +P VI+Y  L++G C+ G I +A ++  EM   G   +++TY++VI+ LC+ G +
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCV 442

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A+++  + +  G  P+  TFN L+  + K  + E  +Q+ N+M   G   D ITYN +
Sbjct: 443 SDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSV 502

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN-------------- 409
           ++   K  K ED ++   +MV KGC PN  T+N++   + K G VN              
Sbjct: 503 LNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGI 562

Query: 410 ---------------------GAHRMYGKMKD-LKCEPNTVTYNILMQMFATSKSTDMVL 447
                                GA++++ +M +  K    T TYNI++  FA      M  
Sbjct: 563 TPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGE 622

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           KL  EM      P+  TYR++I  +C  G+ ++ YK++ EMI EK   P  + +  V+  
Sbjct: 623 KLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMI-EKGFIPSLTTFGRVINC 681

Query: 508 LRRAGQLQKHEELVEKMVDRGFT 530
           L    ++ +  +++  MV  G  
Sbjct: 682 LCVQHRVHEAVDIIHFMVHNGIV 704



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 175/349 (50%), Gaps = 2/349 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TF+ L+    + G   E+    N++ + G   +   F+I I  LCRK   S A S  D
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLD 275

Query: 243 S-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           S +++   PDV+ Y  L+ G C+  N+ EAE+   ++   G++P+ +TY+ +ID  C+ G
Sbjct: 276 SVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMG 335

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A  +    +  G  P+  T+ +L+    +    ++ L ++N     G +   I YN
Sbjct: 336 MLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYN 395

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C++G +  A++++N M   GC+ +  T+N++   + K+G V+ A+ +       
Sbjct: 396 MLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAK 455

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P+  T+N L+  +      +  +++  +M  + V P+V TY  ++          + 
Sbjct: 456 GYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +    M+E+ C+ P    Y ++ + L +AG++ +  +LV++++++G T
Sbjct: 516 METFETMVEKGCV-PNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 166/380 (43%), Gaps = 36/380 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+I ++   R G+ + A+   + +   G  PD + ++ +I  LC+     EA+ +   L
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +   EPD   Y  L+ G+C+ G +  AE++ +     G  P+ +TY  +I+ LC+  +I
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF- 362
            RA  +F   L  G +P  I +N L++   +     + LQ+ N+M   GC +D  TYN  
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLV 432

Query: 363 ----------------------------------LIDCHCKDGKLEDAIKVLNSMVRKGC 388
                                             LID +CK  K+E  I++LN M   G 
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+N +   +SK          +  M +  C PN +TYNIL +    +   +  L 
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L  E+    + P+  ++  +I+ +   G    AY+  R M E+  +   ++ Y +++   
Sbjct: 553 LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612

Query: 509 RRAGQLQKHEELVEKMVDRG 528
                L   E+L  +M   G
Sbjct: 613 AEKLDLHMGEKLFLEMGAGG 632



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 190/410 (46%), Gaps = 9/410 (2%)

Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI 181
           V+  + + + + F+N     P  +     Y+ ++N+  +   F  A      MK+  +  
Sbjct: 92  VQEAVDVFERMDFYN---CEPSVLS----YNAIMNILVESGYFKQAHKVFLRMKNVGIVP 144

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
            V TF+I ++ + R      A+   N M   GC  + +A+  V++    +    EA   F
Sbjct: 145 DVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELF 204

Query: 242 -DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            D L+    PDV  +  L+   C+ G + E+ER+  ++   G+  N++T++I I  LCR 
Sbjct: 205 NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRK 264

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G ++ A  +   ++  G  P+ +T+N L+    K S   +  +  +++   G E D  TY
Sbjct: 265 GMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTY 324

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N LID +CK G L++A K+L   + KG  P+  T+  +   + +  +++ A  ++     
Sbjct: 325 NTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALG 384

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              +P  + YN+L++           L++  EM EN    ++ TY ++I   C MG  ++
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSD 444

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           A   + + I  K   P    +  ++    +  +++   +++ KM   G T
Sbjct: 445 ANNLMNDAI-AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVT 493



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 179/406 (44%), Gaps = 11/406 (2%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD-----LAWHFIDLMKSRNVEITV 183
           L+ L  FN V     F HS   Y  +I   G    F      LA   +D+  S    + +
Sbjct: 21  LKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYI 80

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
                 ++ Y R G   EAV  F RM+ Y C P  ++++ +++IL       +A   F  
Sbjct: 81  GA----MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLR 136

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +K+    PDV  +T  ++ +CR      A R+   M   G Q N   Y  V+        
Sbjct: 137 MKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENY 196

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
              A+++F +ML +G  P+  TFN L+    K    ++  ++ N++ + G  ++  T+N 
Sbjct: 197 RVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNI 256

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
            I   C+ G L  A+ +L+S++R+G  P+  T+N +   + K  +V  A +   K+ +  
Sbjct: 257 FIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG 316

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            EP+  TYN L+  +          K+ +        P+  TY  LI   C     + A 
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                 +  K LKP   +Y M+++ L + G + +  +++ +M + G
Sbjct: 377 ALFNAAL-GKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 1/277 (0%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
           VY   ++ + R G + EA  VF  M     +P+V +Y+ +++ L   G   +AH VF  M
Sbjct: 78  VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
             VG  P+  TF   ++   +  R    L++ N M   GC+ + + Y  ++    ++   
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            +A ++ N M+R G  P+ STFN +   + K G+V  + R+  K+       N  T+NI 
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +Q           + +   +    + P+V TY  LI   C   +   A KY+ +++    
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG- 316

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           L+P    Y  ++    + G LQ  E++++  + +GF 
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFV 353



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 148/356 (41%), Gaps = 37/356 (10%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y  +IN   +  + D A    +    + ++ TV  +++L++   + GL  +A+
Sbjct: 352 FVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQAL 411

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
              N M E GC+ D   +++VI+ LC+    S+A +   D++   + PDV  +  L+ G+
Sbjct: 412 QMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGY 471

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+   +    ++  +M   G+ P+V TY+ V++ L +  +     + F  M+E GC PN 
Sbjct: 472 CKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNK 531

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI------------------------ 358
           IT+N L     KA +  + L + +++   G   DT+                        
Sbjct: 532 ITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRR 591

Query: 359 ------------TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
                       TYN +I+   +   L    K+   M   GC P+  T+ ++       G
Sbjct: 592 MGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITG 651

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
           + +  ++   +M +    P+  T+  ++            + +   M  N + P V
Sbjct: 652 NTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 217/476 (45%), Gaps = 32/476 (6%)

Query: 54  PEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSI-SPSTV 112
           P      E F +L++  H K                T+ SLS        +H + S + +
Sbjct: 89  PSIVKFGELFSALVRMKHYK----------------TVVSLSKQMEMAGISHDVLSLTIL 132

Query: 113 RHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMIN---LAGKVRQFDLAWH 169
            +   + C V +G     VL     +   P  +     +  +IN   + GK+ +   A  
Sbjct: 133 INCFCRLCHVDYG---FSVLGKIIKLGLEPNVIT----FSTLINGFCIEGKIGR---AIE 182

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
             D+M +R  +  V ++SI+++   R G   E +     M+  GC PD + ++ ++  LC
Sbjct: 183 LFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLC 242

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + R  +EA   F  +K     P V+ YT+L+ G    G   EA  +  EMK   I P++ 
Sbjct: 243 KDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLV 302

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            +S++ID +C+ G+++ A  +   M E+G EP+  T+N LM  +       +  +V+  M
Sbjct: 303 AFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVM 362

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              G   D  +++ L++ +CK  ++++A ++ + M  +G  P+  ++N +   + +    
Sbjct: 363 ISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRP 422

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A  ++  M      PN VTY+IL+   +     D  + L + ME + ++P++ TY I+
Sbjct: 423 LEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIM 482

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           I   C  G + +A +   E+   K L+P + V    +  + + G L +  +   +M
Sbjct: 483 IDGMCKYGKFKDARELFAEL-SVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 161/349 (46%), Gaps = 2/349 (0%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           ++  F  L    VR       V    +ME  G + D ++ +I+I+  CR        S  
Sbjct: 90  SIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVL 149

Query: 242 DS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
              +K   EP+VI ++ L+ G+C  G I  A  +F  M   G +PNV++YSI+I  LCR 
Sbjct: 150 GKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRV 209

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+ T    +   M  VGCEP+ + +N ++    K     + + ++ +MK  G     +TY
Sbjct: 210 GKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTY 269

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             LI      G+ ++A  +LN M      P+   F+++   + K G+V+ A  +   M +
Sbjct: 270 TSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTE 329

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
           +  EP+  TYN LM  +          K+ + M      P+V ++ IL+  YC     + 
Sbjct: 330 MGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDE 389

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A +   EM   + L P +  Y  ++  L +A +  + EEL + M   G+
Sbjct: 390 AKQLFDEM-THRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGY 437



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 158/347 (45%), Gaps = 40/347 (11%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C V     ++++L     V   P+ V    +Y+ +++   K R  + A H    M
Sbjct: 202 IIKGLCRVGKTTEVIKLLEHMKVVGCEPDVV----IYNTIVDRLCKDRLVNEAVHIFCKM 257

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           K   +  TV T++ L+      G   EA    N M+     PD +AFS++I I+C++   
Sbjct: 258 KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEV 317

Query: 235 SEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           SEA+    ++ +   EPDV  Y  L+ G+C    + EA +VF  M   G  P+V+++SI+
Sbjct: 318 SEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSIL 377

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR---------------- 337
           ++  C+  +I  A  +F EM   G  P+++++N L+    +A R                
Sbjct: 378 VNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGY 437

Query: 338 -------------------TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
                               ++ + ++  M+  G + D +TYN +ID  CK GK +DA +
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARE 497

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           +   +  KG  PN          + K G ++ AH+ + +M+   C P
Sbjct: 498 LFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 3/252 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  +I++  K  +   A   +  M    VE  V T++ L+  Y       EA   
Sbjct: 299 PDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKV 358

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M   G  PD  +FSI+++  C+ +R  EA+  FD +  +   PD + Y  L+ G C+
Sbjct: 359 FEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQ 418

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           A    EAE +F++M   G  PN+ TYSI++D L + G + +A  +F  M   G +P+ +T
Sbjct: 419 ARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVT 478

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    K  + +   +++ ++   G + +       ID  CK G L++A K    M 
Sbjct: 479 YNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538

Query: 385 RKGCNPNASTFN 396
           +  C+P     N
Sbjct: 539 KDDCSPAQGCIN 550



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 144/334 (43%), Gaps = 37/334 (11%)

Query: 232 RRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           R  ++A S F+ + +    P ++ +  L     R  +      + ++M+MAGI  +V + 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM--------------------- 329
           +I+I+  CR   +     V  +++++G EPN ITF+ L+                     
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 330 -----RVH---------VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
                 VH          +  +T +V+++   MK +GCE D + YN ++D  CKD  + +
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A+ +   M   G  P   T+  +   +  LG    A  +  +MK     P+ V +++L+ 
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           +            + K M E  VEP+V TY  L+  YC       A K    MI  K   
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI-SKGRM 368

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           P    + +++    +A ++ + ++L ++M  RG 
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL 402


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 175/337 (51%), Gaps = 2/337 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+        A+EAV   +RM + GC P+ + + +V++ LC++     A +  + +
Sbjct: 154 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 213

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +  K E DV+++  ++   C+  ++ +A  +F+EM+  GI+PNV TYS +I  LC  G+ 
Sbjct: 214 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 273

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  + ++M+E    PN +TFN L+   VK  +  +  ++Y+ M +   + D  TYN L
Sbjct: 274 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 333

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++  C   +L+ A ++   MV K C P+  T+N + +   K   V     ++ +M     
Sbjct: 334 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 393

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             +TVTY  L+Q        D   K+ K+M  + V P++ TY IL+   C  G    A +
Sbjct: 394 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 453

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            + + +++  +K    +Y  +++ + +AG++    +L
Sbjct: 454 -VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 489



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 189/385 (49%), Gaps = 2/385 (0%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R E VH    Y+ +IN   +  Q  LA   +  M     E ++ T S L+  Y      +
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLV 259
           +AV   ++M E G  PD I F+ +I  L    +ASEA +  D +  +  +P+++ Y  +V
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C+ G+   A  +  +M+ A I+ +V  ++ +ID+LC+   +  A ++F EM   G  
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN +T+++L+       R     Q+ + M       + +T+N LID   K+GK  +A K+
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + M+++  +P+  T+N +         ++ A +M+  M    C P+ VTYN L++ F  
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           SK  +   +L +EM    +  +  TY  LI      G  +NA K  ++M+ +  + P   
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIM 433

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
            Y ++L  L   G+L+K  E+ + M
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYM 458



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 190/407 (46%), Gaps = 5/407 (1%)

Query: 124 HGIPLLQVLSFFN-WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT 182
           H + L   +  F   V +RP  + S   ++++++   K+++FD+     + M+   +   
Sbjct: 24  HDMKLDDAIGLFGGMVKSRP--LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG 81

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           + T++IL+  + R    + A+    +M + G  P  +  S +++  C  +R S+A +  D
Sbjct: 82  LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 141

Query: 243 SLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            + +  + PD I +T L+ G       SEA  +   M   G QPN+ TY +V++ LC+ G
Sbjct: 142 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 201

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
               A ++  +M     E + + FN ++    K    +  L ++ +M+  G   + +TY+
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI C C  G+  DA ++L+ M+ K  NPN  TFN +     K G    A ++Y  M   
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +P+  TYN L+  F      D   ++ + M   +  P+V TY  LI  +C      + 
Sbjct: 322 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 381

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +  REM   + L   +  Y  ++Q L   G     +++ ++MV  G
Sbjct: 382 TELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 427



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 183/375 (48%), Gaps = 2/375 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K    DLA + ++ M++  +E  V  F+ ++    +     +A++ F  ME
Sbjct: 190 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 249

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + +S +IS LC   R S+A Q   D ++ K  P+++ +  L+  + + G   
Sbjct: 250 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 309

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE+++ +M    I P+++TY+ +++  C   ++ +A  +F  M+   C P+ +T+N L+
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   K+ R E   +++ +M   G   DT+TY  LI     DG  ++A KV   MV  G  
Sbjct: 370 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 429

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++++   +   G +  A  ++  M+  + + +   Y  +++    +   D    L
Sbjct: 430 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 489

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+PNV TY  +I+  C       AY  +++M E+  L P S  Y  +++   
Sbjct: 490 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHL 548

Query: 510 RAGQLQKHEELVEKM 524
           R G      EL+ +M
Sbjct: 549 RDGDKAASAELIREM 563



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 165/359 (45%), Gaps = 7/359 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  RH    L +         RP  V     Y  +I+      ++  A   +  M
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVT----YSSLISCLCSYGRWSDASQLLSDM 283

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             + +   + TF+ L+  +V+ G   EA   ++ M +    PD   ++ +++  C   R 
Sbjct: 284 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 343

Query: 235 SEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            +A+  F+ +  KD F PDV+ Y  L++G+C++  + +   +FREM   G+  +  TY+ 
Sbjct: 344 DKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 402

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I  L   G    A  VF +M+  G  P+ +T++ L+       + EK L+V++ M++  
Sbjct: 403 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + D   Y  +I+  CK GK++D   +  S+  KG  PN  T+N +   +     +  A+
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            +  KMK+    PN+ TYN L++            +L +EM       + +T  ++  M
Sbjct: 523 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 581



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 3/153 (1%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    I L G      L  A    D M+   +++ +  ++ ++    +AG   +    
Sbjct: 430 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 489

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
           F  +   G  P+ + ++ +IS LC KR   EA +    +K D   P+   Y  L+R   R
Sbjct: 490 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 549

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
            G+ + +  + REM+      +  T  +V + L
Sbjct: 550 DGDKAASAELIREMRSCRFVGDASTIGLVANML 582


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 9/389 (2%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           +SPD+  Y+ +++   KV + D A    D    R     V T++ L+  + +A    EA 
Sbjct: 41  YSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQ 100

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
               RM      PD + ++ +++ LC+  R  EA+     +   F P+VI Y+ L+ G C
Sbjct: 101 RILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI--VDKGFSPNVITYSTLISGLC 158

Query: 264 RA-GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           R    +SEA ++F  +   G +P V TY+I+ID L +  ++  A ++F+ +++ G EP++
Sbjct: 159 RELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA 218

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+   +    KA R E  L +   M   GC  D +++N +I+  CK+ ++++A  +L+ 
Sbjct: 219 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 278

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M  KGC+PNA +FN +     + G    A   + +M     +P  VTYNIL+     ++ 
Sbjct: 279 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 338

Query: 443 TDMV---LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
              +   + L   M E    P+V TY  LI      G  ++A + +  M  + C+ P   
Sbjct: 339 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI-PNVY 397

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y  ++  L    ++ +  EL   MV++G
Sbjct: 398 TYNSLISGLCGLEKVDEALELFVAMVEKG 426



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 196/413 (47%), Gaps = 17/413 (4%)

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
           I   +S    T   ++   C V     L + L  F+    R  FV     Y+ +IN   K
Sbjct: 37  IKAGYSPDVVTYNTLLHGFCKVGE---LDEALKIFDGAVKRG-FVPDVVTYNALINGFCK 92

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM--EEYGCAPDK 218
             + D A   +  M S N+   V T++ LV    + G   EA     RM   + G +P+ 
Sbjct: 93  ADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA-----RMLIVDKGFSPNV 147

Query: 219 IAFSIVISILCRKRRA-SEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
           I +S +IS LCR+ R  SEA   F S LK  +EP+V  Y  L+ G  +   ++EA  +F 
Sbjct: 148 ITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 207

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            +   G++P+  TY++ ID LC+ G++  A  +  +M E GC P+ ++ N ++    K  
Sbjct: 208 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 267

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           R ++   + + M+  GC  + I++N LI   C+ GK + A+     M+++G  P   T+N
Sbjct: 268 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 327

Query: 397 MIFRCISKL---GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           ++   + K    G +  A  ++  M +    P+ VTY+ L+     +   D   +L   M
Sbjct: 328 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 387

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           E     PNV TY  LI+  CG+   + A +    M+E+ C+ P +  Y  ++ 
Sbjct: 388 EAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCV-PDTITYGTIIS 439



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 179/349 (51%), Gaps = 9/349 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-S 243
           T++ L+      G  ++A   + RM + G +PD + ++ ++   C+     EA   FD +
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +K  F PDV+ Y  L+ G+C+A  + EA+R+ + M    + P+V TY+ +++ LC+ G++
Sbjct: 72  VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR-TEKVLQVYNQMKRLGCEADTITYNF 362
             A  +   +++ G  PN IT++ L+    +  R   + L+++  + + G E +  TYN 
Sbjct: 132 DEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNI 188

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LID   K+ ++ +A ++ + +V+ G  P+A T+ +    + K G V  A  M   M +  
Sbjct: 189 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C P+ V++N ++      K  D    L   ME     PN  ++  LI   C  G W  A 
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 308

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQL---RRAGQLQKHEELVEKMVDRG 528
              +EM+ ++ +KP    Y +++  L   R+ G++++   L + M+++G
Sbjct: 309 TTFKEML-KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 146/285 (51%), Gaps = 5/285 (1%)

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K  F P+ I Y  L+ G C  G +S+A+ ++  M  AG  P+V TY+ ++   C+ G++ 
Sbjct: 3   KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A  +F   ++ G  P+ +T+N L+    KA + ++  ++  +M       D +TYN L+
Sbjct: 63  EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK-LGDVNGAHRMYGKMKDLKC 423
           +  CK+G++++A  ++   V KG +PN  T++ +   + + L  V+ A +++G +     
Sbjct: 123 NGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           EP   TYNIL+         +   +L   + ++ +EP+  TY + I   C  G   +A  
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +++M E+ C+ P    +  V+  L +  ++ + E L+  M  +G
Sbjct: 240 MLKDMDEKGCV-PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 127/252 (50%), Gaps = 5/252 (1%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+  G  PN  TY+ ++  LC  G+++ A  ++  M++ G  P+ +T+N L+    K   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            ++ L++++   + G   D +TYN LI+  CK  KL++A ++L  MV +   P+  T+N 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS-KSTDMVLKLKKEMEEN 456
           +   + K G V+ A  +   + D    PN +TY+ L+       +     LKL   + + 
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
             EP V TY ILI         N A++    +++   L+P +  Y + +  L +AG+++ 
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG-LEPDAITYTVFIDGLCKAGRVED 236

Query: 517 HEELVEKMVDRG 528
              +++ M ++G
Sbjct: 237 ALLMLKDMDEKG 248



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 174 MKSRNVEITVDTFSILVRRYVRA---GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
           M  R V+ TV T++ILV    +A   G   EA+  F+ M E G  PD + +S +I  L +
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 373

Query: 231 KRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             +  +A+    +++ K   P+V  Y +L+ G C    + EA  +F  M   G  P+  T
Sbjct: 374 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTIT 433

Query: 290 YSIVIDA 296
           Y  +I A
Sbjct: 434 YGTIISA 440


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 211/435 (48%), Gaps = 9/435 (2%)

Query: 100 QISTAHSISPSTVRHVIEKSCGVR-HGIPLLQVLSFFNWVTARPEFVHSP--DLYHEMIN 156
           Q++ AH  S ST   + +       H     Q L+F + +       H+P  + ++ ++ 
Sbjct: 76  QLTQAHFTSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEG---HAPLSNTFNNLLC 132

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L  +   FD AW   +++KS+ V +   +F I++     AG           +EE+G +P
Sbjct: 133 LLIRSNYFDKAWWIFNVLKSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSP 191

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + ++ +I   C+      A++ F  + +    P+   Y+ L+ G+ + G   E  +++
Sbjct: 192 NVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMY 251

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M  +GI PN Y Y+ +I   C  G + +A  VFAEM E G     +T+N L+    + 
Sbjct: 252 ENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            +  + +++ +++ ++G   + +TYN LI+  C  GK++ A+++ N +   G +P   T+
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTY 371

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +    SK+ ++ GA  +  +M++     + VTY IL+  FA    TD   ++   ME+
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEK 431

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
           + + P+V TY +LI   C  G+   A K  + + E   L+P S +Y  ++    + G   
Sbjct: 432 SGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMH-LQPNSVIYNTMIHGYCKEGSSY 490

Query: 516 KHEELVEKMVDRGFT 530
           +   L+ +MV  G  
Sbjct: 491 RALRLLNEMVHSGMV 505



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 171/373 (45%), Gaps = 4/373 (1%)

Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
           F  +    EF  SP+  +Y  +I+   K     LA +    M    +     T+S+L+  
Sbjct: 178 FRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNG 237

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
           + + GL  E    +  M   G  P+  A++ +IS  C      +A   F  +++K     
Sbjct: 238 FFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACG 297

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           V+ Y  L+ G CR     EA ++  ++   G+ PN+ TY+I+I+  C  G++  A  +F 
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           ++   G  P  +T+N L+  + K       L +  +M+        +TY  LID   +  
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLN 417

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
             + A ++ + M + G  P+  T++++       G++  A + +  + ++  +PN+V YN
Sbjct: 418 YTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYN 477

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            ++  +    S+   L+L  EM  + + PNV ++   + + C    W  A   + +MI  
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINS 537

Query: 492 KCLKPGSSVYEMV 504
             LKP  S+Y+MV
Sbjct: 538 G-LKPSVSLYKMV 549



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 122/272 (44%), Gaps = 36/272 (13%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A+     M+ + +   V T++IL+    R     EAV   +++ + G +P+ + ++I+
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMK---- 279
           I+  C   +   A   F+ LK     P ++ Y  L+ G+ +  N++ A  + +EM+    
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399

Query: 280 -------------------------------MAGIQPNVYTYSIVIDALCRCGQITRAHD 308
                                           +G+ P+VYTYS++I   C  G +  A  
Sbjct: 400 ARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASK 459

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
            F  + E+  +PNS+ +N ++  + K   + + L++ N+M   G   +  ++   +   C
Sbjct: 460 PFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLC 519

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           +D K ++A  +L  M+  G  P+ S + M+ +
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 5/350 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNR-MEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           V  F+ L+  YV  G   EA    +  M   GC PD   ++ +I  LC+K     A+   
Sbjct: 371 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 430

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           + ++ K  EP+VI YT L+  +C+ G + EA  V  EM   G+  N   Y+ +I ALC+ 
Sbjct: 431 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 490

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            ++  A ++F +M   GC+P+  TFN+L+    K ++ E+ L +Y  M   G  A+TITY
Sbjct: 491 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 550

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           N LI    + G +++A+K++N M+ +GC  +  T+N + + + + G++     ++  M  
Sbjct: 551 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 610

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
               PN ++ NIL+     + +    L+  ++M    + P++ TY  LI   C  G    
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 670

Query: 481 AYKYIREM-IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A     ++ +E  C  P +  Y  ++    + G       L+ + VD GF
Sbjct: 671 ALNLFDKLQVEGIC--PDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGF 718



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 5/349 (1%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V+TF+  +    +     EA    +RM   G  P+   + +++  LCR  +  EA+   +
Sbjct: 305 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 364

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE-MKMAGIQPNVYTYSIVIDALCRCG 301
            + +   P+V+++  L+ G+   G + EA+ V  E M   G  P+++TY+ +I  LC+ G
Sbjct: 365 KVPN---PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 421

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A ++  EM   GCEPN IT+  L+    K  R E+   V ++M   G   + + YN
Sbjct: 422 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 481

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   CKD K++DA+ +   M  KGC P+  TFN +   + K+     A  +Y  M   
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
               NT+TYN L+  F    +    LKL  +M       +  TY  LI   C  G+    
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 601

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
                +M+  K L P +    +++  L R G +Q   E +  M+ RG T
Sbjct: 602 LALFEDMMS-KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 649



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 160/330 (48%), Gaps = 1/330 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+    + G    A    N M+  GC P+ I ++I+I   C++ R  EA++  D +
Sbjct: 409 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 468

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K    + + Y  L+   C+   + +A  +F +M   G +P+++T++ +I  LC+  + 
Sbjct: 469 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 528

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  ++ +ML  G   N+IT+N L+   ++    ++ L++ N M   GC  D ITYN L
Sbjct: 529 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 588

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C+ G +E  + +   M+ KG NPN  + N++   + + G++  A      M     
Sbjct: 589 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 648

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ VTYN L+     +      L L  +++   + P+  TY  LI+ +C  G +++A+ 
Sbjct: 649 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 708

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            +   ++   +    + Y +V   ++   Q
Sbjct: 709 LLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 738



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 189/503 (37%), Gaps = 107/503 (21%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +  F W   +  + H  D+Y+ +I+  G   +F      +  MK   +      F ++++
Sbjct: 113 MELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMK 172

Query: 192 RYVRAGLAAEAV------------------------------------HAFNRMEEYGCA 215
            Y RAGL  +A                                     + F  M   G +
Sbjct: 173 HYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGIS 232

Query: 216 PDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNL---------------- 258
           P    F +V+  LC       A +   D  +    P+ IVY  L                
Sbjct: 233 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKL 292

Query: 259 -------------------VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
                              + G C+   I EA ++   M + G  PN +TY +++  LCR
Sbjct: 293 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 352

Query: 300 CGQITRAHDVFAE--------------------------------MLEVGCEPNSITFNN 327
            G++  A  +  +                                ML VGC P+  T+N 
Sbjct: 353 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 412

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K        ++ N+M+  GCE + ITY  LID  CK+G+LE+A  VL+ M  KG
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              NA  +N +   + K   V  A  M+G M    C+P+  T+N L+         +  L
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQ 506
            L ++M    V  N  TY  LI  +   G    A K + +M+   C  P   + Y  +++
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC--PLDDITYNGLIK 590

Query: 507 QLRRAGQLQKHEELVEKMVDRGF 529
            L RAG ++K   L E M+ +G 
Sbjct: 591 ALCRAGNIEKGLALFEDMMSKGL 613



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 162/329 (49%), Gaps = 3/329 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PD++     + G  ++  L  A   ++ M+ +  E  V T++IL+ R+ + G   EA +
Sbjct: 404 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 463

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             + M   G A + + ++ +IS LC+  +  +A + F  +  K  +PD+  + +L+ G C
Sbjct: 464 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 523

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +     EA  ++++M + G+  N  TY+ +I A  R G +  A  +  +ML  GC  + I
Sbjct: 524 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 583

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L++   +A   EK L ++  M   G   + I+ N LI+  C+ G ++ A++ L  M
Sbjct: 584 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + +G  P+  T+N +   + K G    A  ++ K++     P+ +TYN L+         
Sbjct: 644 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 703

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMY 472
           D    L     ++   PN  T+ IL++ +
Sbjct: 704 DDAHLLLSRGVDSGFIPNEVTWYILVSNF 732



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 38/263 (14%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++  + +I    KV +F+ A      M    V     T++ L+  ++R G   EA+  
Sbjct: 510 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 569

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            N M   GC  D I ++ +I  LCR     +  + F+ +  K   P+ I    L+ G CR
Sbjct: 570 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 629

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GNI  A    R+M   G+ P++ TY+ +I+ LC+ G+   A ++F ++   G  P++IT
Sbjct: 630 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 689

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N                                    LI  HCK+G  +DA  +L+  V
Sbjct: 690 YNT-----------------------------------LISWHCKEGMFDDAHLLLSRGV 714

Query: 385 RKGCNPNASTFNMIFRCISKLGD 407
             G  PN  T+ ++     K GD
Sbjct: 715 DSGFIPNEVTWYILVSNFIKEGD 737


>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
 gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
 gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
 gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 38/342 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF W+  +P F H    Y  M+   G+ +QF      +D M     +    T++ L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             Y RA    EA++ FN+M+E GC                                  +P
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGC----------------------------------KP 432

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D + Y  L+    +AG +  A  +++ M+  G+ P+ +TYS++I+ L + G +  AH +F
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC--HC 368
            EM++ GC PN +T+N +M +H KA   +  L++Y  M+  G E D +TY+ +++   HC
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G LE+A  V   M +K   P+   + ++     K G+V  A + Y  M      PN  
Sbjct: 553 --GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           T N L+  F          +L + M    + P++ TY +L++
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 141/255 (55%), Gaps = 3/255 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  G + + +TY+ ++  L R  Q    + +  EM+  GC+PN++T+N L+  + +A+  
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            + + V+NQM+  GC+ D +TY  LID H K G L+ A+ +   M   G +P+  T+++I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G +  AH+++ +M D  C PN VTYNI+M + A +++    LKL ++M+    
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP+  TY I++ +    G+   A     EM ++K   P   VY +++    +AG ++K  
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594

Query: 519 ELVEKMVDRGFTARP 533
           +  + M+  G   RP
Sbjct: 595 QWYQAMLHAGL--RP 607



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 172/357 (48%), Gaps = 13/357 (3%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI--------LCRKRRASEAQ 238
           ++  R+Y  +G   E V +  R   +G A ++   ++ + I        L +      A 
Sbjct: 289 ALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL 348

Query: 239 SFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            FF  LK +  F+ D   YT +V    RA       ++  EM   G QPN  TY+ +I +
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
             R   +  A +VF +M E GC+P+ +T+  L+ +H KA   +  + +Y +M+  G   D
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           T TY+ +I+C  K G L  A K+   MV +GC PN  T+N++    +K  +   A ++Y 
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M++   EP+ VTY+I+M++       +    +  EM++    P+   Y +L+ ++   G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +   A+++ + M+    L+P       +L    R  ++ +  EL++ M+  G   RP
Sbjct: 589 NVEKAWQWYQAMLHAG-LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RP 642


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 168/346 (48%), Gaps = 3/346 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHA-FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           ++ L+  YV +G   EA    +N M   G  PD   F+I+I  L +K     A    + +
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             K FEP+VI YT L+ G+C+ G + EA  +   M   G+  N   Y+ +I ALC+ G I
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +F EM   GC+P+  TFN+L+    K  + E+ L +Y+ M   G  A+T+TYN L
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           +        ++ A K+++ M+ +GC  +  T+N + + + K G V     ++ +M     
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P  ++ NIL+     +   +  LK  ++M    + P++ TY  LI   C MGH   A  
Sbjct: 584 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASN 643

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              ++  E  ++P +  Y  ++ +    G       L+ K VD GF
Sbjct: 644 LFNKLQSEG-IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGF 688



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 8/400 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           +  F    A+  + H+ D  + +I+  G V  F +    +  MK   +      F ++++
Sbjct: 83  MELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMK 142

Query: 192 RYVRAGLAAEAVHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFE 249
            Y +AGL  +A      M   Y C P   ++++V+ IL        A + F+D L     
Sbjct: 143 HYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVS 202

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P V  +  +++  C    +  A  + R+M   G  PN   Y  +I ALC   +++ A  +
Sbjct: 203 PTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQL 262

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +M  + CEP+  TFN+++    +A R  +  ++ ++M   G   D +TY +L+   C+
Sbjct: 263 LEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCR 322

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR-MYGKMKDLKCEPNTV 428
            G++++A  +LN +     NPN   +N +       G    A   +Y  M     EP+  
Sbjct: 323 MGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAY 378

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T+NI++            L+L  EM     EPNV TY ILI  +C  G    A + +  M
Sbjct: 379 TFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSM 438

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              K L   +  Y  ++  L + G +++  +L  +M  +G
Sbjct: 439 -SAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 138/313 (44%), Gaps = 37/313 (11%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           L+  L   N + A+  F  +   Y  +IN   K  + + A   ++ M ++ + +    ++
Sbjct: 393 LVSALELLNEMVAK-RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYN 451

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF------ 241
            L+    + G   EA+  F  M   GC PD   F+ +I+ LC+  +  EA S +      
Sbjct: 452 CLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE 511

Query: 242 -------------------DSLKDKFEP-----------DVIVYTNLVRGWCRAGNISEA 271
                              DS++  F+            D I Y  L++  C+ G + + 
Sbjct: 512 GVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKG 571

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             +F EM   GI P + + +I+I  LCR G++  A     +M+  G  P+ +T+N+L+  
Sbjct: 572 LGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLING 631

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K    ++   ++N+++  G   D ITYN LI  HC +G   DA  +L   V  G  PN
Sbjct: 632 LCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPN 691

Query: 392 ASTFNMIFRCISK 404
             T++++   I K
Sbjct: 692 EVTWSILINYIVK 704



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 5/197 (2%)

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCNPNASTFNM 397
           EK+L+   QMK  G       +  ++  + K G    A ++L  M     C+P   ++N+
Sbjct: 119 EKLLK---QMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNV 175

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +        A  ++  M      P   T+ ++M+        D    L ++M ++ 
Sbjct: 176 VLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG 235

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
             PN   Y+ LI   C     + A + + +M    C +P    +  V+  L RAG++ + 
Sbjct: 236 CVPNSVIYQTLIHALCENNRVSEALQLLEDMFL-MCCEPDVQTFNDVIHGLCRAGRIHEA 294

Query: 518 EELVEKMVDRGFTARPL 534
            +L+++M+ RGF+   L
Sbjct: 295 AKLLDRMLLRGFSTDAL 311


>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 886

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 38/342 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF W+  +P F H    Y  M+   G+ +QF      +D M     +    T++ L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             Y RA    EA++ FN+M+E GC                                  +P
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGC----------------------------------KP 432

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D + Y  L+    +AG +  A  +++ M+  G+ P+ +TYS++I+ L + G +  AH +F
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC--HC 368
            EM++ GC PN +T+N +M +H KA   +  L++Y  M+  G E D +TY+ +++   HC
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G LE+A  V   M +K   P+   + ++     K G+V  A + Y  M      PN  
Sbjct: 553 --GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           T N L+  F          +L + M    + P++ TY +L++
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 141/255 (55%), Gaps = 3/255 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  G + + +TY+ ++  L R  Q    + +  EM+  GC+PN++T+N L+  + +A+  
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            + + V+NQM+  GC+ D +TY  LID H K G L+ A+ +   M   G +P+  T+++I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G +  AH+++ +M D  C PN VTYNI+M + A +++    LKL ++M+    
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP+  TY I++ +    G+   A     EM ++K   P   VY +++    +AG ++K  
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594

Query: 519 ELVEKMVDRGFTARP 533
           +  + M+  G   RP
Sbjct: 595 QWYQAMLHAGL--RP 607



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 172/357 (48%), Gaps = 13/357 (3%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI--------LCRKRRASEAQ 238
           ++  R+Y  +G   E V +  R   +G A ++   ++ + I        L +      A 
Sbjct: 289 ALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL 348

Query: 239 SFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            FF  LK +  F+ D   YT +V    RA       ++  EM   G QPN  TY+ +I +
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
             R   +  A +VF +M E GC+P+ +T+  L+ +H KA   +  + +Y +M+  G   D
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           T TY+ +I+C  K G L  A K+   MV +GC PN  T+N++    +K  +   A ++Y 
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M++   EP+ VTY+I+M++       +    +  EM++    P+   Y +L+ ++   G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +   A+++ + M+    L+P       +L    R  ++ +  EL++ M+  G   RP
Sbjct: 589 NVEKAWQWYQAMLHAG-LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RP 642


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 8/365 (2%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A+HF DLM   +    + +F+ L+    +    ++    +N+M   G +PD    +I+ +
Sbjct: 74  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILAN 133

Query: 227 ILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW---CRAGNISEAERVFREMKMAG 282
            LC   R SE  +     L+  + PD++ Y  L++G    C+ G+  EA+ +F EMK  G
Sbjct: 134 CLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQG 193

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT---E 339
           + PNV +YS ++   C  G++  +  +F EM++ G +PN + FN L+ +  K  +     
Sbjct: 194 MIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLS 253

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
              +++  M   GCE + I+Y  LI+ +CK  K+E+A+ + N M + G  PN  T++ + 
Sbjct: 254 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 313

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + + G V  A++++G MK      ++  Y I +     +      ++L  E++    +
Sbjct: 314 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFK 373

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            +  +Y  LI   C  G    A+++ +++ +E  L+P      +++    R  Q+ K   
Sbjct: 374 LDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEG-LQPNVVTCNIMIHGFCRVEQVDKANI 432

Query: 520 LVEKM 524
           L EKM
Sbjct: 433 LFEKM 437



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 163/319 (51%), Gaps = 8/319 (2%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+ V    L   +  L  KV   D A    + MK++ +   V ++S LV  +  AG   E
Sbjct: 158 PDIVTYNTLIKGLYGLC-KVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEE 216

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA---SEAQSFFDSLKDK-FEPDVIVYTN 257
           +   FN M + G  P+ + F+++I ILC++ +    S A+  F S+  K  E + I YT 
Sbjct: 217 SKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTI 276

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+ G+C+   + EA  ++ EM   G +PNV TYS ++  L + G++  A+ +F  M   G
Sbjct: 277 LINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASG 336

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
              +S  +   +    K     + ++++N++K    + D  +Y+ LID  CK GK+E A 
Sbjct: 337 ISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAW 396

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK---CEPNTVTYNILM 434
           +    + ++G  PN  T N++     ++  V+ A+ ++ KM+ ++   C P+ +TYN L+
Sbjct: 397 EFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLL 456

Query: 435 QMFATSKSTDMVLKLKKEM 453
           + F  S   + V+ L  +M
Sbjct: 457 RGFCESNKLEEVVNLLHKM 475



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 209/461 (45%), Gaps = 60/461 (13%)

Query: 71  HRKNPNPSSNSNPSLNPDFTIPS-LSLGFSQISTAHSISPS---------TVRHVIE--- 117
           H K   PS++  P+L+P  T+ S +     Q S+ +  +P          + +H +    
Sbjct: 2   HSKTLLPSASFKPNLSPLCTLSSPIPSSVPQTSSTNHPNPILLAFNDRGISFQHRLSSFL 61

Query: 118 KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
           ++C   + I ++Q   FF+ +  R   +     ++ ++    K+  +   +   + M+  
Sbjct: 62  RNCKTGN-IDVIQAFHFFD-LMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLA 119

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL---CRKRRA 234
            +   + T +IL          +E + A   +   G  PD + ++ +I  L   C+    
Sbjct: 120 GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHE 179

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA+  F+ +K +   P+VI Y++LV G+C AG + E++R+F EM   G+QPN+  ++++
Sbjct: 180 DEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVL 239

Query: 294 IDALCRCGQI---TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           ID LC+ G+I   + A  +F  M   GCE N I++  L+  + K  + E+ + +YN+M +
Sbjct: 240 IDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ 299

Query: 351 LG-----------------------------------CEADTITYNFLIDCHCKDGKLED 375
           +G                                      D+  Y   +D  CK+G L +
Sbjct: 300 VGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFE 359

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A+++ N +       +  +++ +   + K G V  A   + ++     +PN VT NI++ 
Sbjct: 360 AMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIH 419

Query: 436 MFATSKSTD---MVLKLKKEMEENEVEPNVNTYRILITMYC 473
            F   +  D   ++ +  ++MEEN   P++ TY  L+  +C
Sbjct: 420 GFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFC 460



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+     A      M S+  E    +++IL+  Y +     EA++ +N M + G  P+ 
Sbjct: 247 GKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNV 306

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
             +S +++ L +  +  +A   F  +K      D  +Y   + G C+ G + EA  +F E
Sbjct: 307 KTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNE 366

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           +K    + +  +YS +ID LC+ G++  A + F ++ + G +PN +T N ++    +  +
Sbjct: 367 LKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQ 426

Query: 338 TEKVLQVYNQMKRL---GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +K   ++ +M+++   GC  D ITYN L+   C+  KLE+ + +L+ M ++
Sbjct: 427 VDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 124/310 (40%), Gaps = 44/310 (14%)

Query: 263 CRAGNIS--EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           C+ GNI   +A   F  M  +   P + +++ ++  L +    ++   ++ +M   G  P
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSP 123

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID-----CH-------- 367
           +  T N L       +R  + L     + R G   D +TYN LI      C         
Sbjct: 124 DLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAK 183

Query: 368 -------------------------CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
                                    C  GKLE++ ++ N MV +G  PN   FN++   +
Sbjct: 184 EIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDIL 243

Query: 403 ---SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
               K+GD++ A +++  M    CE N ++Y IL+  +      +  + L  EM +    
Sbjct: 244 CKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKR 303

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           PNV TY  L+T     G   +A K    M +   +   S +Y + L  L + G L +  E
Sbjct: 304 PNVKTYSTLLTGLLQTGKVGDANKLFGVM-KASGISVDSCIYVIFLDGLCKNGVLFEAME 362

Query: 520 LVEKMVDRGF 529
           L  ++    F
Sbjct: 363 LFNELKSYNF 372



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 6/167 (3%)

Query: 367 HCKDGKLE--DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           +CK G ++   A    + M+R    P  S+FN +   ++K+   +    +Y KM+     
Sbjct: 63  NCKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLS 122

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT-MY--CGMGHWNNA 481
           P+  T NIL             L     +      P++ TY  LI  +Y  C +GH + A
Sbjct: 123 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEA 182

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +   EM + + + P    Y  ++     AG+L++ + L  +MVD+G
Sbjct: 183 KEIFEEM-KAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG 228


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 187/387 (48%), Gaps = 10/387 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y  +++   K  + + +   +  + SR +      ++ +V    ++    EA+ 
Sbjct: 79  TPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALE 138

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
               M   GC P  I F+ +IS  CR++    A S    +     + DV+ Y  L+ G C
Sbjct: 139 LLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLC 198

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG + EAE++   MK +G  P+V  YS  +  LC+ G++  AH V  +M +   +PN +
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVV 258

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRL-GCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           T+N ++    K+ + +  L++  QM    GC  + + Y+ ++D  CK G+ ++A  V+ +
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M R GC P+  T++ +   + K G +  A     +M    C+PN VTY  L+    +   
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 443 TDMVLKLKKEMEENEVE-----PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                ++ +EM           P+V+TY  LI   C  G  ++A K+ + M  + C  P 
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGC-DPD 437

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKM 524
              Y  +++ L R+G+  + E ++ ++
Sbjct: 438 GVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 173/348 (49%), Gaps = 5/348 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ LV  + + G   +       M      P+ ++++ ++  LC+  R  EA+     +
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 245 ---KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
                +  PD++ Y+ L+ G+C+AG + E+  + +E+   G++P+   Y+ V+ +LC+  
Sbjct: 72  ISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSA 131

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A ++  EM+  GC P  ITFN L+    +    E    +  +M   G +AD +TYN
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYN 191

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+D  CK G+L++A ++L  M   GC P+   ++     + K G V  AH++  +M+D 
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE-VEPNVNTYRILITMYCGMGHWNN 480
             +PN VTYN ++     S   D  L++ ++M  ++    NV  Y  ++   C +G    
Sbjct: 252 HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A   +  M    C +P    Y  ++  L +AG++++  E V +M   G
Sbjct: 312 ARSVMEAMARAGC-RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 181/386 (46%), Gaps = 8/386 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVRAGLAAEAVHAFNR 208
           Y+ ++    K+ ++  A   +  M SR    T D  T+S L+  Y +AG   E+      
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKE 107

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
           +   G  PD + ++ V++ LC+  R  EA    + + +    P +I +  L+ G CR  N
Sbjct: 108 VISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN 167

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           +  A+ + ++M  +G++ +V TY+ ++D LC+ G++  A  +   M   GC P+ + +++
Sbjct: 168 LEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK- 386
            +    K+ +     QV  QM+    + + +TYN ++D  CK GK++ A++++  M    
Sbjct: 228 FVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC  N   ++ +   + KLG    A  +   M    C P+ VTY+ L+     +   +  
Sbjct: 288 GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK----PGSSVYE 502
           ++  +EM     +PN  TY  L+   C  G    A + + EM           P  S Y 
Sbjct: 348 VEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYN 407

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
            ++  L +AG++    +  ++M  +G
Sbjct: 408 ALIGGLCKAGRIDDALKFFQRMRSQG 433



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 134/278 (48%), Gaps = 3/278 (1%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+ + +  LV G+ + G   + ER+   M    IQPNV +Y+ +++ LC+  +   A ++
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 310 FAEMLEVG--CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
             +M+  G    P+ +T++ L+  + KA + E+  ++  ++   G   D + Y  ++   
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK  +L +A+++L  M+R GC P   TFN +     +  ++  A  +  KM     + + 
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VTYN LM     +       +L + M+ +   P+V  Y   +   C  G   +A++ + +
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           M +     P    Y  +L  L ++G++    E++E+M 
Sbjct: 248 MRDSH-HDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 9/213 (4%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRRYVRAGLAAEA 202
           H P++  Y+ +++   K  + D A   ++ M S +   + V  +S +V    + G   EA
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRG 261
                 M   GC PD + +S +++ LC+  +  EA ++  +   +  +P+ + Y +LV G
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372

Query: 262 WCRAGNISEAERVFREMKMAGIQ-----PNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            C  G ++EAER+  EM   G       P+V TY+ +I  LC+ G+I  A   F  M   
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           GC+P+ ++++ ++    ++ R  +   + ++++
Sbjct: 433 GCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 3/251 (1%)

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   G  PN  T++ +++   + G+      +   M     +PN +++N L+    K  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 338 TEKVLQVYNQMKRLGCEA--DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
             +  ++   M   G  +  D +TY+ L+  +CK GK+E++ ++L  ++ +G  P+A  +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             +   + K   +  A  +  +M    C P  +T+N L+      K+ +M   L ++M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
           + V+ +V TY  L+   C  G    A + +  M    C  P    Y   +  L ++G++ 
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGC-APDVVAYSSFVYGLCKSGKVL 239

Query: 516 KHEELVEKMVD 526
              +++E+M D
Sbjct: 240 DAHQVLEQMRD 250



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 3/117 (2%)

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M    C PN+VT+N L+  F+         +L + M   +++PNV +Y  L+   C +  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 478 WNNAYKYIREMIEEKCLK-PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           W+ A + +R+MI       P    Y  +L    +AG++++  EL+++++ RG   RP
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGL--RP 115


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 10/371 (2%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM--------EEYGCAPDK 218
           A  F D + +    +   ++ IL+      G   EAV+    +        + +    + 
Sbjct: 126 ALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNV 185

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + +SIVI  LCR     E   F++ +  +   P+   Y +L+RG C  G   E   +  E
Sbjct: 186 VMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDE 245

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   G+  +VY ++++ID LC+ G +  A ++F EM+  G EPN +T   LM  +     
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +   ++++ +   G + D  TYN  I  +CK G++ DA++V + M R+G  PN  T+N 
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +  C+ K G+V+GA  +   M      P+ VT  IL+     SK  D  + L  ++ E+ 
Sbjct: 366 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + P+V +Y ILI   C       A   +R+M   K L P    Y  ++  L R+G++   
Sbjct: 426 LTPDVWSYTILIHGCCTSRRMGEAMNLLRDM-HLKNLVPHIVTYSCLIDGLCRSGRISNA 484

Query: 518 EELVEKMVDRG 528
             L+ +M  +G
Sbjct: 485 WRLLNEMHVKG 495



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 179/364 (49%), Gaps = 2/364 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I     V +F   +  +D M  R ++++V  F++L+    + G+  EA   F+ M 
Sbjct: 223 YGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMV 282

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ +  + ++   C K     A+  FD++ +  F+ DV  Y   + G+C+ G + 
Sbjct: 283 NRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVR 342

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A RVF EM   G+ PN+ TY+ +ID LC+ G+++ A ++   M   G  P+ +T   L+
Sbjct: 343 DAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILL 402

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K+ R ++ + ++NQ+   G   D  +Y  LI   C   ++ +A+ +L  M  K   
Sbjct: 403 DGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLV 462

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++ +   + + G ++ A R+  +M      P+T+TY+IL+      +  D  + L
Sbjct: 463 PHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFL 522

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M +  +EP+V  Y I+I  YC     + A    REM   K L P    Y ++   + 
Sbjct: 523 FNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM-HMKNLVPDIVTYTILFNAVF 581

Query: 510 RAGQ 513
           ++G 
Sbjct: 582 KSGS 585



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 136/274 (49%), Gaps = 4/274 (1%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
            G+VR    A    D M    V   + T++ L+    +AG  + A      M   G  PD
Sbjct: 338 VGRVRD---AVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPD 394

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            +   I++  LC+ +R  +A   F+ L +    PDV  YT L+ G C +  + EA  + R
Sbjct: 395 IVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLR 454

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
           +M +  + P++ TYS +ID LCR G+I+ A  +  EM   G  P++IT++ L+    K  
Sbjct: 455 DMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQ 514

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
             ++ + ++NQM + G E D + Y  +ID +CK  ++++AI +   M  K   P+  T+ 
Sbjct: 515 HLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYT 574

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           ++F  + K G  +   +    ++D+   P  + Y
Sbjct: 575 ILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY 608



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 142/302 (47%), Gaps = 1/302 (0%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D+A    D +     +  V T+++ +  Y + G   +AV  F+ M   G  P+ + ++ +
Sbjct: 307 DMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366

Query: 225 ISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I  LC+    S A     ++ +    PD++    L+ G C++  + +A  +F ++  +G+
Sbjct: 367 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 426

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P+V++Y+I+I   C   ++  A ++  +M      P+ +T++ L+    ++ R     +
Sbjct: 427 TPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWR 486

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           + N+M   G   DTITY+ L+D   K   L++A+ + N M+++G  P+   + ++     
Sbjct: 487 LLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYC 546

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K   ++ A  ++ +M      P+ VTY IL      S S     K    + +    P V 
Sbjct: 547 KSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVL 606

Query: 464 TY 465
            Y
Sbjct: 607 KY 608



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 133/299 (44%), Gaps = 9/299 (3%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F   LK  +  D +    +++G C  G + +A     E+   G   N  +Y I+I+ LC 
Sbjct: 95  FGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCE 154

Query: 300 CGQITRAHDVFAEMLEVG--------CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            G++  A ++   + +           + N + ++ ++    +    ++  + YN+M   
Sbjct: 155 NGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGN 214

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G   +  TY  LI   C  GK  +   +++ M+R+G + +   F ++   + K G +  A
Sbjct: 215 GVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEA 274

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             M+ +M +   EPN VT   LM  +    + DM  +L   + E   + +V TY + I  
Sbjct: 275 REMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHG 334

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           YC +G   +A +   EM  E  + P    Y  ++  L +AG++    E+V+ M   G T
Sbjct: 335 YCKVGRVRDAVRVFDEMCREGVV-PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT 392


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 191/415 (46%), Gaps = 46/415 (11%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME------EY 212
           GK R+F      +  MK  N++ TV TF IL+    +     +A+  F +M+      + 
Sbjct: 163 GKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKV 222

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEA 271
             APD I ++ +I  LC+  R  EA      ++ D+  P    +  L+ G+CR+G I  A
Sbjct: 223 FVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVA 282

Query: 272 ERVFREMKMAGIQPNV-----------------------------------YTYSIVIDA 296
            ++F EM+ A I+PNV                                    TY++ I+A
Sbjct: 283 HKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINA 342

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            C    + +A +   EM + GC P+++ +  L+    +A R +    V +++K  G   D
Sbjct: 343 FCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLD 402

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            + YN LI   CK  KL+ A + LN M   G  P++ T+N +    SK+G+   AH+   
Sbjct: 403 RVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462

Query: 417 KMKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE--NEVEPNVNTYRILITMYC 473
           KM + +   P   TY  L+  +  + + D  +K+ KEM    ++V PN   Y ILI   C
Sbjct: 463 KMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLC 522

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                N A   + +M + + + P ++ Y  + + LR    L K  +L+++MV++ 
Sbjct: 523 KQTQVNFALSLLDDM-KFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQA 576



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 168/344 (48%), Gaps = 7/344 (2%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           +LAW+ +D +   N        + L+    +A    +      +M++    P  I F I+
Sbjct: 134 NLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGIL 193

Query: 225 ISILCRKRRASEAQSFFDSLKDKFE-------PDVIVYTNLVRGWCRAGNISEAERVFRE 277
           I+ LC+ RR  +A   F+ +K + E       PD I+Y  L+ G C+ G   EA  +  +
Sbjct: 194 INHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGK 253

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M+     P   T++ +I+  CR G+I  AH +F EM     EPN IT N L+    K +R
Sbjct: 254 MRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNR 313

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
               ++ +  M++ G + + +TY   I+  C    +  A++ L+ M + GC P+A  +  
Sbjct: 314 ISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYT 373

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +   +++ G ++ A  +  K+K+     + V YN+L+  F      D   +   EME   
Sbjct: 374 LICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAG 433

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
           V+P+  TY  LI+ +  +G++  A+K++++M EE+ L P    Y
Sbjct: 434 VKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTY 477



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 195/430 (45%), Gaps = 9/430 (2%)

Query: 106 SISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD--LYHEMINLAGKV 161
           +I P+ +    +I   C  R     L+V           +   +PD  +Y+ +I+   KV
Sbjct: 182 NIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKV 241

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
            + + A   +  M+S     T  TF+ L+  Y R+G    A   FN ME     P+ I  
Sbjct: 242 GRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITL 301

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + ++  +C+  R S A  FF  ++ K  + + + YT  +  +C   N+++A     EM  
Sbjct: 302 NTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSK 361

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P+   Y  +I  L + G++  A  V +++ E G   + + +N L+    K ++ ++
Sbjct: 362 DGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDR 421

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV-RKGCNPNASTFNMIF 399
             +  N+M+  G + D++TYN LI    K G  + A K +  M   +G +P   T+  + 
Sbjct: 422 AQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALI 481

Query: 400 RCISKLGDVNGAHRMYGKMKDL--KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
                  +++ A +++ +M ++  K  PNTV YNIL+         +  L L  +M+   
Sbjct: 482 HAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRG 541

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           V PN  TY  +          + A+K +  M+E+ C  P     E++ + L   G++ K 
Sbjct: 542 VMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQAC-NPDYITMEILTEWLSAVGEITKL 600

Query: 518 EELVEKMVDR 527
           ++  +  ++R
Sbjct: 601 KKFTQGCMNR 610



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 174/391 (44%), Gaps = 53/391 (13%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL---- 244
           L+RR  R G+  EA+ AF+ ++ +  A +    + +I++L +  R   A +  D +    
Sbjct: 12  LLRRLGRIGMVDEALAAFSTLDSH--AKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPE 69

Query: 245 ----------------------------------------KDKFEPDVIVYTNLVRGWCR 264
                                                   K    PD I  T L+   CR
Sbjct: 70  SEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCR 129

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +GN + A  +   + M     +    + ++  L +  +  + + +  +M ++  +P  IT
Sbjct: 130 SGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVIT 189

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMK------RLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           F  L+    K  R +  L+V+ +MK      ++    DTI YN LID  CK G+ E+A+ 
Sbjct: 190 FGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALC 249

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           ++  M    C P  +TFN +     + G++  AH+++ +M++ + EPN +T N L+    
Sbjct: 250 LMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMC 309

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
                   ++  + M++  ++ N  TY + I  +C + + N A +++ EM ++ C  P +
Sbjct: 310 KHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCF-PDA 368

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            VY  ++  L +AG+L     +V K+ + GF
Sbjct: 369 VVYYTLICGLAQAGRLDDASSVVSKLKEAGF 399


>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 179/342 (52%), Gaps = 4/342 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           LS F W+ A   F  +   Y+ M+ +  + +Q++L+    + M +  +     T+S L+ 
Sbjct: 27  LSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLIS 86

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEP 250
              R      A+  F+RM +  C PD + +S +I +  +  +  EA + ++S+K   ++P
Sbjct: 87  CANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKP 146

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D + Y  +VR + RAG IS A  +F EMK +GIQP    Y+I+I  L R G++  A  VF
Sbjct: 147 DKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVF 206

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR-LGCEADTITYNFLIDCHCK 369
            EM + G +PN++T + +M ++ ++ +  + L +++ M++ L C  D I YN +I    +
Sbjct: 207 QEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQDLAC--DIIVYNAVIKMCRE 264

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G + +A + L  MV  G  PN  T+  +    +K G    A RM+ ++ +   +P+ ++
Sbjct: 265 AGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMS 324

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
           Y  L+Q +  +K  + V ++  EM      P+   + +++ +
Sbjct: 325 YTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWCVILNL 366



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 161/340 (47%), Gaps = 3/340 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F  L   +N  + + T++++++   R      +      M   G  PD I +S +IS   
Sbjct: 30  FKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCAN 89

Query: 230 RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R      A ++FD + D +  PD + Y+ ++  + + G   EA  ++  +K +G +P+  
Sbjct: 90  RCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKV 149

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY  ++    R G I+ A  +F EM   G +P S+ +N ++    +A R    L+V+ +M
Sbjct: 150 TYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEM 209

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           K+ G + + +T + +++ + + GK+ + + + + M R+    +   +N + +   + G V
Sbjct: 210 KQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHM-RQDLACDIIVYNAVIKMCREAGLV 268

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A +   +M +   +PN  TY  ++ ++A +       ++  ++ E   +P+V +Y  L
Sbjct: 269 PEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSL 328

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +  Y     +    + + EM+   C  P   ++ ++L  L
Sbjct: 329 LQGYGNAKDYEKVQEILHEMVSANC-APDERLWCVILNLL 367



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 150/308 (48%), Gaps = 4/308 (1%)

Query: 224 VISILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           V++IL   +    A S F  L+    F  ++  Y  +++   R      ++++  +M  A
Sbjct: 13  VVAILNTLKSWKVALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINA 72

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           GI+P+  TYS +I    RC     A   F  M +  C P+++T++ ++ V+ K  + ++ 
Sbjct: 73  GIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEA 132

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           + +Y  +K+ G + D +TY  ++    + G +  A+ + + M   G  P +  +N++  C
Sbjct: 133 VALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISC 192

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + + G +  A +++ +MK    +PN VT + +M++++ S      L +   M + ++  +
Sbjct: 193 LGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQ-DLACD 251

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           +  Y  +I M    G    A +Y+REM+E    +P    Y  ++    + G   + + + 
Sbjct: 252 IIVYNAVIKMCREAGLVPEAEQYLREMVEYG-HQPNDWTYRNMISLYAKNGMAVEAQRMF 310

Query: 522 EKMVDRGF 529
            ++V+ G+
Sbjct: 311 SQLVEAGY 318



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 138/281 (49%), Gaps = 13/281 (4%)

Query: 251 DVIVYTNLVRGWCRAGNI---SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           DV+   N ++ W  A ++    +AE+ F          N+YTY++++  L R  Q   + 
Sbjct: 12  DVVAILNTLKSWKVALSLFKWLQAEQNF--------NLNIYTYNVMLKVLRRGQQWELSQ 63

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +  +M+  G  P++IT++ L+    + +  +  +  +++M    C  D +TY+ +ID +
Sbjct: 64  QIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVY 123

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
            K GK ++A+ +  S+ + G  P+  T+  + R   + G ++ A  ++ +MK    +P +
Sbjct: 124 GKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGS 183

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           V YNI++     +      LK+ +EM++  V+PN  T   ++ +Y   G           
Sbjct: 184 VVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHH 243

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           M ++  L     VY  V++  R AG + + E+ + +MV+ G
Sbjct: 244 MRQD--LACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYG 282



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 26/352 (7%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           +++ ST+  V  K       + L + +    W   +P+ V     Y  M+ L G+     
Sbjct: 113 AVTYSTMIDVYGKVGKYDEAVALYESVKKSGW---KPDKV----TYGTMVRLFGRAGYIS 165

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
            A    D MK   ++     ++I++    RAG    A+  F  M++ G  P+ +  S V+
Sbjct: 166 AAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVM 225

Query: 226 SILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            I  R  +  E    F  ++     D+IVY  +++    AG + EAE+  REM   G QP
Sbjct: 226 EIYSRSGKVMEGLGIFHHMRQDLACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQP 285

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N +TY  +I    + G    A  +F++++E G +P+ +++ +L++ +  A   EKV ++ 
Sbjct: 286 NDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEIL 345

Query: 346 NQMKRLGCEADT----ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF-NMIFR 400
           ++M    C  D     +  N L  C   D  +E   ++L S +R  CNP        IF 
Sbjct: 346 HEMVSANCAPDERLWCVILNLLDAC---DTDVE--FEILRSCLRM-CNPTMDNIVGHIFE 399

Query: 401 ---CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
               + KLGD  G   +   + D+  E +    N L+Q+       +   KL
Sbjct: 400 ENLVLKKLGD--GLQSL---LSDMAEEAHKPICNSLLQLIWHKGDRNYAFKL 446


>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 181/378 (47%), Gaps = 3/378 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++ + G+  Q+ +A   +D +  ++  + V  ++ ++  Y R G   +A++ F RM+E G
Sbjct: 188 LVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMG 247

Query: 214 CAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
            +P  + +++++ +  +  R+  +     + ++ K  + D    + ++    R G + EA
Sbjct: 248 PSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREA 307

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
           +  F E+K  G +P   TY+ ++    + G  T A  V  EM E  C  +S+T+N L+  
Sbjct: 308 KDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAA 367

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           + +A  +++   V   M + G   + ITY  +ID + K GK ++A+K+  SM   GC PN
Sbjct: 368 YARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 427

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+N +   + K    N   +M   MK   C PN  T+N ++ +         V ++ +
Sbjct: 428 TCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFR 487

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM+    EP+ +T+  LI+ Y   G   +A K   EM          + Y  +L  L R 
Sbjct: 488 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG-FNACVTTYNALLNALARK 546

Query: 512 GQLQKHEELVEKMVDRGF 529
           G  +  E ++  M  +GF
Sbjct: 547 GDWRSGENVISDMKSKGF 564



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 175/393 (44%), Gaps = 35/393 (8%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F   +KS   E    T++ L++ + +AG+  EA+     MEE  C  D + ++ +++
Sbjct: 307 AKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVA 366

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
              R   + EA    + +  K   P+ I YT ++  + +AG   EA ++F  MK AG  P
Sbjct: 367 AYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 426

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  TY+ V+  L +  +      +  +M   GC PN  T+N ++ +       + V +V+
Sbjct: 427 NTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVF 486

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +MK  G E D  T+N LI  + + G   DA K+   M R G N   +T+N +   +++ 
Sbjct: 487 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 546

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           GD      +   MK    +P   +Y++++Q +A   +   + ++++ + E ++ P+    
Sbjct: 547 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLL 606

Query: 466 RILI----------------TMYCGMGH---------------WNNAY---KYIREMIEE 491
           R L+                T++   G+                NN Y   + I + I E
Sbjct: 607 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHE 666

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             L P    Y  ++    R G+  K EE+++ +
Sbjct: 667 DGLNPDLVTYNSLMDMYVRRGECWKAEEILKTL 699



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/445 (20%), Positives = 185/445 (41%), Gaps = 72/445 (16%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E++    +      A   I++M  + V     T++ ++  Y +AG   EA+  F  M+
Sbjct: 361 YNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 420

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-----------------------DK 247
           E GC P+   ++ V+S+L +K R++E       +K                       DK
Sbjct: 421 EAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDK 480

Query: 248 F-------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           F             EPD   +  L+  + R G+  +A +++ EM  AG    V TY+ ++
Sbjct: 481 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 540

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS------RTEKVL------ 342
           +AL R G      +V ++M   G +P   +++ +++ + K        R E+ +      
Sbjct: 541 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIF 600

Query: 343 -----------------------QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                                  + +   K+ G + D + +N ++    ++   + A  +
Sbjct: 601 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 660

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L S+   G NP+  T+N +     + G+   A  +   ++  + +P+ V+YN +++ F  
Sbjct: 661 LQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 720

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
                  +++  EM E  + P + TY   ++ Y  MG +      I  M +  C +P   
Sbjct: 721 KGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDC-RPNEL 779

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
            ++MV+    RAG+  +  + V K+
Sbjct: 780 TFKMVVDGYCRAGKYSEAMDFVSKI 804



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/276 (19%), Positives = 131/276 (47%), Gaps = 13/276 (4%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   +   +    + I  MKS+  + T  ++S++++ Y + G          R+E
Sbjct: 536 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG----NYLGIERIE 591

Query: 211 EYGCAPDKI--AFSIVISIL-----CRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
           E G    +I  ++ ++ ++L     CR    SE ++F    K  ++PD++++ +++  + 
Sbjct: 592 E-GINEGQIFPSWMLLRTLLLANFKCRALAGSE-RAFTLFKKHGYKPDMVIFNSMLSIFT 649

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R     +AE + + +   G+ P++ TY+ ++D   R G+  +A ++   + +   +P+ +
Sbjct: 650 RNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV 709

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++N +++   +    ++ +++ ++M   G      TYN  +  +   G   +   V+  M
Sbjct: 710 SYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECM 769

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
            +  C PN  TF M+     + G  + A     K+K
Sbjct: 770 AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 805



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 3/171 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + PD+  ++ M+++  +   +D A   +  +    +   + T++ L+  YVR G   +A 
Sbjct: 634 YKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAE 693

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                +E+    PD ++++ VI   CRK    EA      + ++   P +  Y   V G+
Sbjct: 694 EILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 753

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
              G   E E V   M     +PN  T+ +V+D  CR G+ + A D  +++
Sbjct: 754 TAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 804


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 175/358 (48%), Gaps = 12/358 (3%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TF+ L+    R G   EAV   +RM E G  P +I +  ++  +C+K     A +   
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 243 SLKD--KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            +++     P+V++Y+ ++   C+ G  S+A+ +F EM+  GI P+++TY+ +I   C  
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+ + A  +  EMLE    P+ +T+N L+   VK  +  +  ++Y++M   G   +TITY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + +ID  CK  +L+ A  +   M  KGC+PN  TFN +         ++    +  +M +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                +T TYN L+  F      +  L L +EM  + + P++ T   L+   C  G   +
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483

Query: 481 AYKYIREMIEEK----------CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A +  + M + K           ++P    Y +++  L   G+  + EEL E+M  RG
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 198/449 (44%), Gaps = 25/449 (5%)

Query: 102 STAHSISPSTVRHVIEK----SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI-- 155
           S A      ++R  + K    SC    G   L++ S F+ +    + +   DL+ +M+  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI---DLFSDMLRS 73

Query: 156 ----------NLAGKVRQF---DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
                      L G V +    DL       M+ + +   + +F+IL++ +        A
Sbjct: 74  RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
           +  F ++ + G  PD + F+ ++  LC + R SEA + F  + +    P+V+ +T L+ G
Sbjct: 134 LSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEP 320
            CR G I EA  +   M   G+QP   TY  ++D +C+ G    A ++  +M EV    P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N + ++ ++    K  R      ++ +M+  G   D  TYN +I   C  G+  DA ++L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ +  +P+  T+N +     K G    A  +Y +M      PNT+TY+ ++  F   
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D    +   M      PN+ T+  LI  YCG    ++  + + EM E   L   ++ 
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG-LVADTTT 432

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y  ++      G L    +L+++M+  G 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 174/391 (44%), Gaps = 13/391 (3%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  +   A +    M+ + +   + T++ ++  +  +G  ++A      M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
            E   +PD + ++ +I+   ++ +  EA+  +D  L     P+ I Y++++ G+C+   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             AE +F  M   G  PN+ T++ +ID  C   +I    ++  EM E G   ++ T+N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-- 386
           +            L +  +M   G   D +T + L+D  C +GKL+DA+++   M +   
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 387 ---------GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
                    G  P+  T+N++   +   G    A  +Y +M      P+T+TY+ ++   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 D   ++   M      PNV T+  LI  YC  G  ++  +   EM   + +   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM-GRRGIVAN 615

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  Y  ++   R+ G +    ++ ++M+  G
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSG 646



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 177/403 (43%), Gaps = 15/403 (3%)

Query: 136 NWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           N  T   E    PDL  Y+ MI       ++  A   +  M  R +   V T++ L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
           V+ G   EA   ++ M   G  P+ I +S +I   C++ R   A+  F  +  K   P++
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I +  L+ G+C A  I +   +  EM   G+  +  TY+ +I      G +  A D+  E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTITYN 361
           M+  G  P+ +T + L+       + +  L+++  M++            G E D  TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI     +GK  +A ++   M  +G  P+  T++ +   + K   ++ A +M+  M   
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN VT+  L+  +  +   D  L+L  EM    +  N  TY  LI  +  +G+ N A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               +EMI    + P +     +L  L    +L++   ++EK+
Sbjct: 636 LDIFQEMISSG-VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 182/373 (48%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   A  F D + +   ++   ++  L+    + G    A+     +EE    P
Sbjct: 151 LRGEVKK---ALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKP 207

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D + ++I+I  LC+ +   EA + +  +  K   P+V+ YT L+ G+C  G + EA  + 
Sbjct: 208 DVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALL 267

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EMK+  I P+VYT+SI+IDAL + G++  A  V A M++   +P+ +T+N+L+  +   
Sbjct: 268 NEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLV 327

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
           +  +    V+N M + G      +Y  +ID  CK   +++AI +   M  K   PN  TF
Sbjct: 328 NEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITF 387

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + K G +     +  KM+D     + +TY+ L+     +   D  + L K+M  
Sbjct: 388 NSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMIT 447

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
            E++P++ TY ILI   C  G    A +  + ++  K        Y +++    +AG   
Sbjct: 448 QEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLL-IKGYHLDIRTYTVMISGFCKAGLFD 506

Query: 516 KHEELVEKMVDRG 528
           +   L+ KM D G
Sbjct: 507 EALALLSKMEDNG 519



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 179/381 (46%), Gaps = 5/381 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I   C +      +Q++      + +P+ V    +Y+ +I+   K +    A +    M
Sbjct: 180 LINGLCKIGETKAAIQLMRNLEERSIKPDVV----MYNIIIDSLCKNKLVGEACNLYSEM 235

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
            ++ +   V T++ L+  +   G   EAV   N M+     PD   FSI+I  L ++ + 
Sbjct: 236 NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKM 295

Query: 235 SEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             A+     + K   +PDV+ Y +LV G+     +  A+ VF  M  +G+ P V +Y+I+
Sbjct: 296 KAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIM 355

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID LC+   +  A  +F EM      PN+ITFN+L+    K+ R   V  + ++M+    
Sbjct: 356 IDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQ 415

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
            AD ITY+ LID  CK+  L+ AI +   M+ +   P+  T+ ++   + K G +  A  
Sbjct: 416 LADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQE 475

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  +       +  TY +++  F  +   D  L L  +ME+N   PN  T+ I+I    
Sbjct: 476 VFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALF 535

Query: 474 GMGHWNNAYKYIREMIEEKCL 494
                + A K +REMI    L
Sbjct: 536 EKDENDKAEKLLREMIARGLL 556



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 179/406 (44%), Gaps = 37/406 (9%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K+++F  A      +  + +   + T +IL+  +   G    +      + + G  PD I
Sbjct: 81  KMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVI 140

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
             + +I  LC +    +A  F D +   +F+ D I Y  L+ G C+ G    A ++ R +
Sbjct: 141 TLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNL 200

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +   I+P+V  Y+I+ID+LC+   +  A ++++EM      PN +T+  L+         
Sbjct: 201 EERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCL 260

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL------------------ 380
            + + + N+MK      D  T++ LID   K+GK++ A  VL                  
Sbjct: 261 IEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSL 320

Query: 381 -----------------NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
                            NSM + G  P   ++ ++   + K   V+ A  ++ +MK    
Sbjct: 321 VDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNV 380

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PNT+T+N L+     S     V  L  +M +     +V TY  LI   C   H + A  
Sbjct: 381 IPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIA 440

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             ++MI ++ ++P    Y +++  L + G+L+  +E+ + ++ +G+
Sbjct: 441 LFKKMITQE-IQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGY 485



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 1/281 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P    + N++    +      A  + + +   GI  ++ T +I+I+  C  GQIT +  V
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            A +L+ G  P+ IT   L++        +K L+ ++ +  L  + D I+Y  LI+  CK
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G+ + AI+++ ++  +   P+   +N+I   + K   V  A  +Y +M   +  PN VT
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L+  F         + L  EM+   + P+V T+ ILI      G    A K +  ++
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAA-KIVLAVM 305

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +  +KP    Y  ++       +++  + +   M   G T
Sbjct: 306 MKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT 346



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 36/252 (14%)

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F  ML +   P +  FNN++   VK  R    + +   +   G  +D +T N LI+C C
Sbjct: 56  LFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFC 115

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM-------------- 414
             G++  +  VL +++++G +P+  T   + + +   G+V  A +               
Sbjct: 116 HLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRI 175

Query: 415 -YGKMKDLKC--------------------EPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            YG + +  C                    +P+ V YNI++     +K       L  EM
Sbjct: 176 SYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM 235

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
              ++ PNV TY  LI  +C MG    A   + EM + K + P    + +++  L + G+
Sbjct: 236 NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEM-KLKNINPDVYTFSILIDALGKEGK 294

Query: 514 LQKHEELVEKMV 525
           ++  + ++  M+
Sbjct: 295 MKAAKIVLAVMM 306


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 224/486 (46%), Gaps = 57/486 (11%)

Query: 98  FSQISTAHSISPS-TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMIN 156
           F+  S+  ++ PS +VRHV++        +P   + +FF +++++PEF  + + Y  M  
Sbjct: 67  FAACSSIRNVLPSLSVRHVVDLINRNPLSLPHRSIFAFFKFISSQPEFRFTVETYFVMAR 126

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI-----------------LVRRYVRAGLA 199
                  F  A   I+L+ SR  + +  +  I                 L+  Y+  G  
Sbjct: 127 FLAIHEMFVEAQSLIELVVSRKGKNSASSVFISLVEMRGTPMCDFLVDALMITYMDLGFI 186

Query: 200 AEAVHAFNRMEEY-------GCAP--DKI--------------------------AFSIV 224
            + +  F    ++       GC    D++                           F+I+
Sbjct: 187 PDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNIL 246

Query: 225 ISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           ++  C++    +AQ  FD + K    P V+ +  L+ G+C+ GN+    R+   M+ +  
Sbjct: 247 MNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRT 306

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V+TYS +I+ALC+  ++  AH +F EM E G  PN + F  L+  H +  + + + +
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKE 366

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            Y +M   G + D + YN L++  CK+G L  A  +++ M+R+G  P+  T+  +     
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFC 426

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-QMFATSKSTDMVLKLKKEMEENEVEPNV 462
           + GDV+ A  +  +M     E + V ++ L+  M    +  D    L +EM    ++P+ 
Sbjct: 427 RGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERAL-REMLRAGMKPDD 485

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY +++  +C  G     +K ++EM  +  + P    Y ++L  L + GQ++  + L++
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHI-PNVVTYNVLLNGLCKLGQMKNADMLLD 544

Query: 523 KMVDRG 528
            M++ G
Sbjct: 545 AMLNVG 550



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 6/221 (2%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  LY+ ++N   K      A + +D M  R +     T++ L+  + R G    A+  
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEI 437

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCR 264
              M++ G   D++ FS +I  +C++ R  +A+ +  + L+   +PD + YT ++  +C+
Sbjct: 438 RKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCK 497

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G+     ++ +EM+  G  PNV TY+++++ LC+ GQ+  A  +   ML VG  P+ IT
Sbjct: 498 KGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDIT 557

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +N L+  H + +   K    Y Q   +G  AD  +Y  L++
Sbjct: 558 YNTLLEGHHRHANASK---HYKQKPEIGIVADLASYKSLVN 595


>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 192/401 (47%), Gaps = 13/401 (3%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRNVE-ITVDTFSI 188
           FF W   +  + H P  Y+EMI++      KV+QF +    +D MK  + + + V+   +
Sbjct: 286 FFMWAGHQDCYSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLM 345

Query: 189 LVRRYVRAGLAAEAVHAFNRMEE--YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           ++R+Y    LA   +H F + ++      P+  A ++++  LC+     +AQ+ F  +K+
Sbjct: 346 ILRKYTEKHLAH--LHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKN 403

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           K +PD   Y  L  GWCR  N S   RV  EM   G  P+ +TY+  ID+ C+ G +T A
Sbjct: 404 KVKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEA 463

Query: 307 HDVFAEMLEVG---CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            ++F  M   G     P + T+  ++   V++ RTE+  ++   M   G   D  TY  +
Sbjct: 464 TELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQV 523

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C  GK+E+A K L  M  KG  P+  T+N     + +      A  +YG+M +  C
Sbjct: 524 IEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGC 583

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+  T+N+L+ MF      D   +   EM++     + +TY ++I          +A  
Sbjct: 584 VPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACF 643

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            + E++  K +K     ++  L QL   G LQ   +L E M
Sbjct: 644 LLDEVV-NKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHM 683



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 4/239 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGC---APDKIAFSIVISILCRKRRASEAQSFF 241
           T++  +  + +AG+  EA   F  M   G    +P    ++I+I  L +  R  E     
Sbjct: 446 TYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLI 505

Query: 242 -DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            D +     PDV  Y  ++ G C AG + EA +   EM   G +P++ TY+  +D LC  
Sbjct: 506 KDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCEN 565

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +   A  ++  M+E GC P+  TFN L+ +  +    +   + +++M + GC  DT TY
Sbjct: 566 KKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTY 625

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
             +I+      K+EDA  +L+ +V KG       F+     +S +GD+   H++   M+
Sbjct: 626 CVMIEGLFNCNKMEDACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMR 684



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 7/169 (4%)

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK   +EDA + +   V+    P+A+T+N++F    ++ + +   R+  +M ++   P++
Sbjct: 386 CKCSLVEDA-QAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDS 444

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEV---EPNVNTYRILITMYCGMGHWNNAYKY 484
            TYN  +  F  +       +L + M         P   TY I+I            +K 
Sbjct: 445 FTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKL 504

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           I++MI    L P  S Y+ V++ +  AG++++  + +E+M ++G+  RP
Sbjct: 505 IKDMINSGVL-PDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGY--RP 550


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 175/358 (48%), Gaps = 12/358 (3%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TF+ L+    R G   EAV   +RM E G  P +I +  ++  +C+K     A +   
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 243 SLKD--KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            +++     P+V++Y+ ++   C+ G  S+A+ +F EM+  GI P+++TY+ +I   C  
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+ + A  +  EMLE    P+ +T+N L+   VK  +  +  ++Y++M   G   +TITY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + +ID  CK  +L+ A  +   M  KGC+PN  TFN +         ++    +  +M +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                +T TYN L+  F      +  L L +EM  + + P++ T   L+   C  G   +
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483

Query: 481 AYKYIREMIEEK----------CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A +  + M + K           ++P    Y +++  L   G+  + EEL E+M  RG
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 198/449 (44%), Gaps = 25/449 (5%)

Query: 102 STAHSISPSTVRHVIEK----SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI-- 155
           S A      ++R  + K    SC    G   L++ S F+ +    + +   DL+ +M+  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI---DLFSDMLRS 73

Query: 156 ----------NLAGKVRQF---DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
                      L G V +    DL       M+ + +   + +F+IL++ +        A
Sbjct: 74  RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA 133

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
           +  F ++ + G  PD + F+ ++  LC + R SEA + F  + +    P+V+ +T L+ G
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEP 320
            CR G I EA  +   M   G+QP   TY  ++D +C+ G    A ++  +M EV    P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N + ++ ++    K  R      ++ +M+  G   D  TYN +I   C  G+  DA ++L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ +  +P+  T+N +     K G    A  +Y +M      PNT+TY+ ++  F   
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D    +   M      PN+ T+  LI  YCG    ++  + + EM E   L   ++ 
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG-LVADTTT 432

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y  ++      G L    +L+++M+  G 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 174/391 (44%), Gaps = 13/391 (3%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  +   A +    M+ + +   + T++ ++  +  +G  ++A      M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
            E   +PD + ++ +I+   ++ +  EA+  +D  L     P+ I Y++++ G+C+   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             AE +F  M   G  PN+ T++ +ID  C   +I    ++  EM E G   ++ T+N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-- 386
           +            L +  +M   G   D +T + L+D  C +GKL+DA+++   M +   
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 387 ---------GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
                    G  P+  T+N++   +   G    A  +Y +M      P+T+TY+ ++   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 D   ++   M      PNV T+  LI  YC  G  ++  +   EM   + +   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM-GRRGIVAN 615

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  Y  ++   R+ G +    ++ ++M+  G
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSG 646



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 177/403 (43%), Gaps = 15/403 (3%)

Query: 136 NWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           N  T   E    PDL  Y+ MI       ++  A   +  M  R +   V T++ L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
           V+ G   EA   ++ M   G  P+ I +S +I   C++ R   A+  F  +  K   P++
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I +  L+ G+C A  I +   +  EM   G+  +  TY+ +I      G +  A D+  E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTITYN 361
           M+  G  P+ +T + L+       + +  L+++  M++            G E D  TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI     +GK  +A ++   M  +G  P+  T++ +   + K   ++ A +M+  M   
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN VT+  L+  +  +   D  L+L  EM    +  N  TY  LI  +  +G+ N A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               +EMI    + P +     +L  L    +L++   ++EK+
Sbjct: 636 LDIFQEMISSG-VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 3/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG-CAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T +  VRR   AG    A+    R  + G  A D  A + +++  C+    +EA+  FD 
Sbjct: 4   TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +      P+ + YT L+ G+   G   +   +F EM+  G++PN+YTY+ +I   CR G+
Sbjct: 64  MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGE 123

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
             RA  +F EM   G   N +++N L+    +  +     ++ + M+  G     IT+N 
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNL 183

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+D + K GK+ +A+   N M   G  P+A T+NM+     +  D+  A+R    MK+  
Sbjct: 184 LVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            EP  VTY IL+  FA         ++   ME+  +E + +TY +L+   C  G+  +A 
Sbjct: 244 LEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDAR 303

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           K  + M  EK ++P + +Y+M++    R G   K  +L+ +M  +G 
Sbjct: 304 KLFQSM-GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGL 349



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 168/356 (47%), Gaps = 2/356 (0%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
           KS +  + V   + LV    + G  AEA   F+ M   G AP+++ ++ ++       + 
Sbjct: 30  KSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQR 89

Query: 235 SEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            +  + F+ ++    EP++  Y  L+  WCR G    A  +F EM + GI  NV +Y+ +
Sbjct: 90  EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTL 149

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I  LCR G++  A  +   M   G  P+ ITFN L+  + KA +    L  +NQMK  G 
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           +   +TYN LI   C+   +  A + L+ M  +G  P   T+ ++    ++   +  A  
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +   M+    E +  TY +L++      +     KL + M E  VEP+   Y ++I  Y 
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G    A K I EM  +K L P S+ Y + ++ L +  + Q+ E L++ MV  G 
Sbjct: 330 REGSSYKALKLIMEM-RQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGL 384



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 163/365 (44%), Gaps = 57/365 (15%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q +  +   + M+   VE  + T++ L+  + R G    A   F+ M   G   + ++++
Sbjct: 88  QREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYN 147

Query: 223 IVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I+ LCR  +  +A    D ++ +   P +I +  LV G+ +AG +S A   F +MK A
Sbjct: 148 TLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAA 207

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G QP+  TY+++I   CR   +TRA+   ++M E G EP  +T+  L+    + +   K 
Sbjct: 208 GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA 267

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            ++   M++ G E D  TY  L+   C +G ++DA K+  SM  KG              
Sbjct: 268 FEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG-------------- 313

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
                                 EP+ V Y++++  +    S+   LKL  EM +  + PN
Sbjct: 314 ---------------------VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPN 352

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             +Y + I + C                ++KC +      E +L  + RAG LQ  E + 
Sbjct: 353 SASYGLTIRVLC---------------KDDKCQEA-----EALLDDMVRAG-LQTSESIC 391

Query: 522 EKMVD 526
           + ++D
Sbjct: 392 QALLD 396



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 134/252 (53%), Gaps = 3/252 (1%)

Query: 157 LAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           +AG  R   L  A   +D+M++     ++ TF++LV  Y +AG  + A+  FN+M+  G 
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAER 273
            P  + ++++I+  CR R  + A      +K++  EP  + YT L+  + R  ++ +A  
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +   M+ AG++ + +TY +++ ALC  G +  A  +F  M E G EP+++ ++ ++  + 
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           +   + K L++  +M++ G   ++ +Y   I   CKD K ++A  +L+ MVR G   + S
Sbjct: 330 REGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSES 389

Query: 394 TFNMIFRCISKL 405
               +    ++L
Sbjct: 390 ICQALLDAKARL 401



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 7/250 (2%)

Query: 123 RHG--IPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
           RHG      ++L        RP  +     ++ +++  GK  +   A  F + MK+   +
Sbjct: 155 RHGKLWDAAKLLDMMRTEGTRPSIIT----FNLLVDGYGKAGKMSNALPFFNQMKAAGFQ 210

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
            +  T+++L+  + RA     A  A + M+E G  P K+ ++I+I    R+    +A   
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270

Query: 241 FDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
              + K   E D   Y  LVR  C  GN+ +A ++F+ M   G++P+   Y ++I    R
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G   +A  +  EM + G  PNS ++   +RV  K  + ++   + + M R G +     
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESI 390

Query: 360 YNFLIDCHCK 369
              L+D   +
Sbjct: 391 CQALLDAKAR 400


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 227/478 (47%), Gaps = 31/478 (6%)

Query: 70  HHRKNPNPSSNSNPSLNPDFTIPSLS---LGFSQI--STAHSISPSTVRHVIEKSCGVRH 124
           H  KN NP    +PSL   F + + S   + + ++  S  H+I      H+      + +
Sbjct: 22  HFLKNSNPGIVLSPSLRFRFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLF---VLMAY 78

Query: 125 GIPLLQVLSFFNWVTARPEFVH-------------------SPDLY--HEMINLAGKVRQ 163
             PL  ++ F   +TA  +                      SPDLY  + ++N   +  Q
Sbjct: 79  SYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQ 138

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
              A  ++  M    +E  + T S LV  +  +    +AV+   +ME+ G   D +  +I
Sbjct: 139 PSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTI 198

Query: 224 VISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I  LC+ R    A      +KD+   P+V+ Y++L+ G C++G +++AER   EM    
Sbjct: 199 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 258

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           I PNV T+S +IDA  + G++++   V+  M+++  +PN  T+++L+      +R ++ +
Sbjct: 259 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 318

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           ++ + M   GC  + +TY+ L +   K  +++D IK+L+ M ++G   N  + N + +  
Sbjct: 319 KMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 378

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            + G ++ A  ++G M      PN  +YNI++     +   +  L   + M++   + ++
Sbjct: 379 FQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDI 438

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            TY I+I   C       AY    ++ + K ++P    Y +++ +L RAG   + + L
Sbjct: 439 ITYTIMIHGMCKACMVKEAYDLFYKL-KFKRVEPDFKAYTIMIAELNRAGMRTEADAL 495



 Score = 45.4 bits (106), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)

Query: 88  DFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHS 147
           D  I  L L  S+  T + ++ ST+ +   KS  V  GI LL  +         P+   +
Sbjct: 315 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM---------PQRGVA 365

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            +    + +I    +  + DLA      M S  +   + +++I++      G   +A+  
Sbjct: 366 ANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSR 425

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M++     D I ++I+I  +C+     EA   F  LK K  EPD   YT ++    R
Sbjct: 426 FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNR 485

Query: 265 AGNISEAERVFR 276
           AG  +EA+ + R
Sbjct: 486 AGMRTEADALNR 497


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 180/395 (45%), Gaps = 21/395 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +++++    K++           M S  +   + T  IL+  +        A     ++ 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   F+ +I  +C + +  EA   FD +  + F PDV+ Y  L+ G C+ GN S
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+   M     QPNV+ Y+ +ID+LC+  Q+T A ++F+EM+  G  P+  T+N+L+
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                    + V  + N+M       D +++N ++D  CK+GK+ +A  V++ M+++G  
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL-- 447
           PN  T+  +      L +++ A +++  M    C PN ++YN L+  +   +  D  +  
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY 363

Query: 448 -----------------KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
                            K+   M      PNV +Y  LI  YC +   + A     EM  
Sbjct: 364 TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 423

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           ++ L P +  Y  ++  L    +LQ    L  +MV
Sbjct: 424 QE-LIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 184/401 (45%), Gaps = 21/401 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K RQ   A++    M ++ +   + T++ L+                N M 
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    PD ++F+ V+  LC++ + +EA    D +  +  EP+V+ YT L+ G C    + 
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA-------------------HDVF 310
           EA +VF  M   G  PNV +Y+ +I+  C+  +I +A                     VF
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVF 383

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
             M+  GC PN I++N L+  + K  R +K + ++ +M R     DT+TY+ LI   C  
Sbjct: 384 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 443

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            +L+DAI + + MV     PN  T+ ++   + K   +  A  +   ++    +P+    
Sbjct: 444 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 503

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           NI +     +   +    L   +    ++P+V TY I+I   C  G  + A K  REM E
Sbjct: 504 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 563

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             C   G  +Y  + +   R  +  +  +L+++MV RGF+A
Sbjct: 564 NGCTLNG-CIYNTITRGFLRNNETSRAIQLLQEMVARGFSA 603



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 1/290 (0%)

Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
           SF   L+ +  P  + +  L+    +  + S    +  +M   GI PN+YT  I+I++ C
Sbjct: 48  SFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFC 107

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
              ++  A  V A++L++G +P++ TF  L+R      +  + L ++++M   G   D +
Sbjct: 108 HLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVV 167

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  LI+  CK G    AI++L SMV+K C PN   +N I   + K   V  A  ++ +M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
                 P+  TYN L+           V  L  EM ++++ P+V ++  ++   C  G  
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             A+  + +MI ++ ++P    Y  ++       ++ +  ++ + MV +G
Sbjct: 288 TEAHDVVDKMI-QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 5/239 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+++ D A +    M  + +     T+S L+          +A+  F+ M 
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
                P+ + + I++  LC+ R  +EA +   +++    +PD+ V    + G CRAG + 
Sbjct: 458 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 517

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  +   G+QP+V+TYSI+I+ LCR G +  A  +F EM E GC  N   +N + 
Sbjct: 518 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 577

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           R  ++ + T + +Q+  +M   G  AD  T    +     DG L+ ++K    ++R GC
Sbjct: 578 RGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG-LDQSLK---QILRNGC 632



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 17/289 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+++ D A H+  LM      + +D                EAV  F+ M 
Sbjct: 344 YNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMD----------------EAVKVFDTMV 387

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             GC P+ I+++ +I+  C+ +R  +A   F  + + +  PD + Y+ L+ G C    + 
Sbjct: 388 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 447

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +F EM      PN+ TY I++D LC+   +  A  +   +     +P+    N  +
Sbjct: 448 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 507

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +A   E    +++ +   G + D  TY+ +I+  C+ G L++A K+   M   GC 
Sbjct: 508 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 567

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            N   +N I R   +  + + A ++  +M       +  T  + ++M +
Sbjct: 568 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 616



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 4/204 (1%)

Query: 330 RVHVKA---SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           R H K+   +  +  +  +N+M R+     T+ +N L+    K       + + + M   
Sbjct: 31  RFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSF 90

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN  T +++      L  V  A  +  K+  L  +P+T T+  L++           
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L L  +M      P+V TY  LI   C +G+ + A + +  M+++ C +P    Y  ++ 
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC-QPNVFAYNTIID 209

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L +  Q+ +   L  +MV +G +
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGIS 233


>gi|116787233|gb|ABK24422.1| unknown [Picea sitchensis]
          Length = 504

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 191/417 (45%), Gaps = 25/417 (5%)

Query: 83  PSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARP 142
           P +  + T+  L LG         +S   V  V++ S G       ++ + FF W   + 
Sbjct: 61  PQMGIENTLNGLGLG---------VSIKFVEDVLKLSYGAG-----MEAMKFFRWAGLKL 106

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
              HSP  ++ +++L G  + FD  W  I +MK++ + ++ +T S +   YV+AG   EA
Sbjct: 107 SSKHSPLAWNLLVDLLGSDKLFDAMWDCIKIMKNQGI-VSTETLSSVFGNYVQAGKVDEA 165

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGW 262
              F  ME+YGC  D +A +  IS LCR ++   A  FFDS+K++  PD   Y  L+ GW
Sbjct: 166 RMTFEVMEQYGCRQDVVALNCYISALCRYKQVKAALEFFDSVKERIAPDADTYALLLEGW 225

Query: 263 CRAGNISEAERVFREM--KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
              GN+S A   F EM  ++  +  N   Y+  +  L    Q+  A      M    C P
Sbjct: 226 EIEGNVSNARSTFGEMIARLGWMPNNTSAYNAFLSTLVNGFQVDEALKYLGVMKTKKCLP 285

Query: 321 NSITFNNLMRVHVKASRTE------KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           +   F N +++  +    +      +++ ++  M++ G   D  TYN +I   C    ++
Sbjct: 286 DLGFFRNTLQILYQRKAMKEPYGLWQLMSLWEFMRQSGIVPDLPTYNTMIGVCCSANPIQ 345

Query: 375 --DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
              A  +L+ M   G  P++ T+N IF        V  A  ++ +M   +  P    Y +
Sbjct: 346 VNSAYSLLDEMALTGAFPDSKTYNTIFEAFITARKVEEASSIFREMTKNEFCPLYANYVM 405

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
            ++M+  +  ++M + + + M +  + P  +   ILI  +  +G  + A KY  E I
Sbjct: 406 AIKMYFEADDSEMAVMMWRHMIQKAIFPKSDCAAILIDGFLDLGRVSAALKYSLEAI 462


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 198/423 (46%), Gaps = 11/423 (2%)

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
           VR V++   GV         + FF W   +  + H    Y  +I+    V Q+   W  I
Sbjct: 93  VREVMKTDVGVN------VKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMI 146

Query: 172 -DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
            ++++S    +T    S ++R    A +  +A+  F +++   C P   A++ +I +L  
Sbjct: 147 QEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIH 206

Query: 231 KRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + +  +    ++ + ++    PD + Y+ L+  +C+ G    A R+  EMK  G+QP   
Sbjct: 207 EGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAK 266

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+++I    +   +  A  +F EM  + C P+  T+  L+R   KA R ++    Y++M
Sbjct: 267 IYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEM 326

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI-SKLGD 407
           +R  C+ DT+  N +I+   K G+L+D +K+   M    C PN  T+N I + +      
Sbjct: 327 QREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSR 386

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V+     + +MK     P+  TY+IL+  F  +   +  + L +EM+E    P    Y  
Sbjct: 387 VSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCS 446

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI        ++ A +  +E ++E C    + VY ++++ L +AG+L     L ++M   
Sbjct: 447 LIDALGKAKRYDLACELFQE-LKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKL 505

Query: 528 GFT 530
           G T
Sbjct: 506 GCT 508



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 176/382 (46%), Gaps = 38/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S L+  + + G    A+   N M+E G  P    ++++IS+  +      A S F+ +
Sbjct: 232 TYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM 291

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +  +  PDV  YT L+RG  +AG I EA   + EM+    +P+    + +I+ L + G++
Sbjct: 292 RYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRL 351

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTITYNF 362
                +F EM    C PN +T+N +++   ++ SR  +V   + +MK  G      TY+ 
Sbjct: 352 DDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSI 411

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNP-------------------------------- 390
           LID  CK  ++E A+ +L  M  KG  P                                
Sbjct: 412 LIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471

Query: 391 ---NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              +A  + ++ + + K G ++ A  ++ +M  L C PN   YN LM   A +   D  L
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEAL 531

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
              ++M+E+   P++N+Y I++      G  + A + +  M +   +KP +  Y  VL  
Sbjct: 532 TTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNM-KNSTIKPDAVSYNTVLSA 590

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           L  AG  ++  EL+++M   GF
Sbjct: 591 LSHAGMFEEAAELMKEMNALGF 612



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 166/344 (48%), Gaps = 2/344 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +  +Y  +I+L  K+     A    + M+       V T++ L+R   +AG   EA H +
Sbjct: 264 TAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFY 323

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRA 265
           + M+   C PD +  + +I+ L +  R  +    F+ +      P+V+ Y  +++    +
Sbjct: 324 HEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFES 383

Query: 266 -GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +SE    F  MK +GI P+ +TYSI+ID  C+  +I +A  +  EM E G  P    
Sbjct: 384 KSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAA 443

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+    KA R +   +++ ++K     +    Y  +I    K G+L+DAI + + M 
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMS 503

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           + GC PN   +N +   +++   ++ A     KM++  C P+  +YNI++   A +    
Sbjct: 504 KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPH 563

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             +++   M+ + ++P+  +Y  +++     G +  A + ++EM
Sbjct: 564 RAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 6/323 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y E+I   GK  + D A+HF   M+  + +      + ++    +AG   + +  
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKL 357

Query: 206 FNRMEEYGCAPDKIAFSIVISILCR-KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
           F  M    C P+ + ++ +I  L   K R SE  S+F+ +K     P    Y+ L+ G+C
Sbjct: 358 FEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFC 417

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   I +A  +  EM   G  P    Y  +IDAL +  +   A ++F E+ E  C  +S 
Sbjct: 418 KTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE-NCGSSSA 476

Query: 324 TFNNLMRVHV-KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
               +M  H+ KA R +  + ++++M +LGC  +   YN L+    +   L++A+  +  
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRK 536

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC P+ +++N+I   ++K G  + A  M   MK+   +P+ V+YN ++   + +  
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596

Query: 443 TDMVLKLKKEMEENEVEPNVNTY 465
            +   +L KEM     E ++ TY
Sbjct: 597 FEEAAELMKEMNALGFEYDLITY 619



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 4/292 (1%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA-GLAAEAVH 204
           PD  + + MIN  GK  + D      + M   +    V T++ +++    +    +E   
Sbjct: 333 PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFS 392

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F RM+  G +P    +SI+I   C+  R  +A    + + +K F P    Y +L+    
Sbjct: 393 WFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 452

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A     A  +F+E+K      +   Y+++I  L + G++  A ++F EM ++GC PN  
Sbjct: 453 KAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +N LM    +A   ++ L    +M+  GC  D  +YN +++   K G    A+++L +M
Sbjct: 513 AYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNM 572

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
                 P+A ++N +   +S  G    A  +  +M  L  E + +TY+ +++
Sbjct: 573 KNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 3/280 (1%)

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
           + ++R    A  I +A  +F ++K    QP    Y+ +I  L   GQ  + H+++ EM  
Sbjct: 163 SQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN 222

Query: 316 VG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
            G C P+++T++ L+    K  R +  +++ N+MK  G +     Y  +I    K   + 
Sbjct: 223 EGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVH 282

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A+ +   M    C P+  T+  + R + K G ++ A+  Y +M+   C+P+TV  N ++
Sbjct: 283 GALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMI 342

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI-TMYCGMGHWNNAYKYIREMIEEKC 493
                +   D  LKL +EM  +   PNV TY  +I  ++      +  + +   M +   
Sbjct: 343 NFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERM-KGSG 401

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           + P    Y +++    +  +++K   L+E+M ++GF   P
Sbjct: 402 ISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCP 441



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 1/239 (0%)

Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
           + + + MK   +  +  T+SIL+  + +     +A+     M+E G  P   A+  +I  
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450

Query: 228 LCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           L + +R   A   F  LK+        VY  +++   +AG + +A  +F EM   G  PN
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           VY Y+ ++  L R   +  A     +M E GC P+  ++N ++    K     + +++  
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            MK    + D ++YN ++      G  E+A +++  M   G   +  T++ I   I K+
Sbjct: 571 NMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 99/222 (44%), Gaps = 34/222 (15%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F   P  Y  +I+  GK +++DLA      +K      +   ++++++   +AG   +A+
Sbjct: 437 FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAI 496

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
           + F+ M + GC P                                  +V  Y  L+ G  
Sbjct: 497 NLFDEMSKLGCTP----------------------------------NVYAYNALMSGLA 522

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RA  + EA    R+M+  G  P++ +Y+I+++ L + G   RA ++   M     +P+++
Sbjct: 523 RACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAV 582

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           ++N ++     A   E+  ++  +M  LG E D ITY+ +++
Sbjct: 583 SYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 1/157 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S  +Y  MI   GK  + D A +  D M        V  ++ L+    RA +  EA+   
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
            +M+E+GC PD  +++I+++ L +      A     ++K+   +PD + Y  ++     A
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHA 594

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           G   EA  + +EM   G + ++ TYS +++A+ +  Q
Sbjct: 595 GMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 175/358 (48%), Gaps = 12/358 (3%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TF+ L+    R G   EAV   +RM E G  P +I +  ++  +C+K     A +   
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 243 SLKD--KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            +++     P+V++Y+ ++   C+ G  S+A+ +F EM+  GI P+++TY+ +I   C  
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+ + A  +  EMLE    P+ +T+N L+   VK  +  +  ++Y++M   G   +TITY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + +ID  CK  +L+ A  +   M  KGC+PN  TFN +         ++    +  +M +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                +T TYN L+  F      +  L L +EM  + + P++ T   L+   C  G   +
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483

Query: 481 AYKYIREMIEEK----------CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A +  + M + K           ++P    Y +++  L   G+  + EEL E+M  RG
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 198/449 (44%), Gaps = 25/449 (5%)

Query: 102 STAHSISPSTVRHVIEK----SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI-- 155
           S A      ++R  + K    SC    G   L++ S F+ +    + +   DL+ +M+  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI---DLFSDMLRS 73

Query: 156 ----------NLAGKVRQF---DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
                      L G V +    DL       M+ + +   + +F+IL++ +        A
Sbjct: 74  RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
           +  F ++ + G  PD + F+ ++  LC + R SEA + F  + +    P+V+ +T L+ G
Sbjct: 134 LSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEP 320
            CR G I EA  +   M   G+QP   TY  ++D +C+ G    A ++  +M EV    P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N + ++ ++    K  R      ++ +M+  G   D  TYN +I   C  G+  DA ++L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ +  +P+  T+N +     K G    A  +Y +M      PNT+TY+ ++  F   
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D    +   M      PN+ T+  LI  YCG    ++  + + EM E   L   ++ 
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG-LVADTTT 432

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y  ++      G L    +L+++M+  G 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 174/391 (44%), Gaps = 13/391 (3%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  +   A +    M+ + +   + T++ ++  +  +G  ++A      M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
            E   +PD + ++ +I+   ++ +  EA+  +D  L     P+ I Y++++ G+C+   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             AE +F  M   G  PN+ T++ +ID  C   +I    ++  EM E G   ++ T+N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-- 386
           +            L +  +M   G   D +T + L+D  C +GKL+DA+++   M +   
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 387 ---------GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
                    G  P+  T+N++   +   G    A  +Y +M      P+T+TY+ ++   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 D   ++   M      PNV T+  LI  YC  G  ++  +   EM   + +   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM-GRRGIVAN 615

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  Y  ++   R+ G +    ++ ++M+  G
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSG 646



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 177/403 (43%), Gaps = 15/403 (3%)

Query: 136 NWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           N  T   E    PDL  Y+ MI       ++  A   +  M  R +   V T++ L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
           V+ G   EA   ++ M   G  P+ I +S +I   C++ R   A+  F  +  K   P++
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I +  L+ G+C A  I +   +  EM   G+  +  TY+ +I      G +  A D+  E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTITYN 361
           M+  G  P+ +T + L+       + +  L+++  M++            G E D  TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI     +GK  +A ++   M  +G  P+  T++ +   + K   ++ A +M+  M   
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN VT+  L+  +  +   D  L+L  EM    +  N  TY  LI  +  +G+ N A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               +EMI    + P +     +L  L    +L++   ++EK+
Sbjct: 636 LDIFQEMISSG-VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 174/341 (51%), Gaps = 5/341 (1%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L VLS    +   P  V    L + +  + GK+ Q  + +   D M  R ++  V T+++
Sbjct: 117 LSVLSKILKLGLEPSIVTFTTLLNGLC-MEGKMDQVMMLY---DDMLVRGLQPNVYTYNV 172

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           ++    ++G A EA+    +ME+ GC P+ + +S +I   C + +  EA+S FD +  K 
Sbjct: 173 IINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             P+V  YT+L+ G+C+   I EA ++  E    G+ P++ T++ +I  LCR G+   A 
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +F  +   G  PN +T+  L+    K    E+   ++ +M+R   + + + Y  LID  
Sbjct: 293 QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK GK++D  ++ + ++ +G  PN  T+  +   + K G +  AH+++ KM++  C P+ 
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK 412

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             YN+++Q F   K   M  +L +EM       +  T  +L
Sbjct: 413 CAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 170/355 (47%), Gaps = 2/355 (0%)

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
            +E  + + SIL+  +         +   +++ + G  P  + F+ +++ LC + +  + 
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 238 QSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
              +D  L    +P+V  Y  ++    ++G  +EA    ++M+  G  PNV  YS +ID 
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            C  GQ+  A  VF  M+  GC PN  T+ +LM  + K  R E+ +Q+ ++  R G   D
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            +T+  +I   C+ G+   A ++   +   G  PN  T+ ++   + K G++  A  ++ 
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M+    +PN V Y IL+             +L   + +  ++PNV TY  L+   C  G
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEG 391

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
               A+K  R+M E+ C  P    Y +++Q   +        +LVE+MV+RGF+A
Sbjct: 392 LIIEAHKLFRKMEEDGC-TPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSA 445



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 155/337 (45%), Gaps = 1/337 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN    + + D     +  +    +E ++ TF+ L+      G   + +  ++ M   G
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P+   ++++I+ L +  +A+EA  F   + K    P+V+ Y+ L+ G+C  G + EA 
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            VF  M   G  PNVYTY+ +++  C+  +I  A  +  E L  G  P+ +TF  ++   
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +A R     Q++  +   G   + +TY  L+D  CK G LE+A  +   M R    PN 
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNL 342

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
             + ++   + K G +     ++ ++ D   +PN  TY  L+             KL ++
Sbjct: 343 VIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRK 402

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           MEE+   P+   Y ++I  +      + A + + EM+
Sbjct: 403 MEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMV 439



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 146/334 (43%), Gaps = 36/334 (10%)

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
           K +     SF   L  K  P ++ ++ L     R G+      + +E++  GI+ ++++ 
Sbjct: 41  KDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSL 100

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           SI+I+  C   ++     V +++L++G EP+ +TF  L+       + ++V+ +Y+ M  
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G + +  TYN +I+   K GK  +A+  L  M + GC PN   ++ +       G ++ 
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV------------ 458
           A  ++  M    C PN  TY  LM  +   +  +  ++L  E     +            
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280

Query: 459 -----------------------EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                                   PN+ TY +L+   C  G+   A+   +EM +   +K
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEM-QRSTVK 339

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           P   +Y +++  L + G+++  +EL  +++D G 
Sbjct: 340 PNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGL 373



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 1/216 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K+ + + A   +D    + +   + TF+ ++    RAG    A   F  + 
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            +G  P+ + + +++  LC+     EA + F  + +   +P++++YT L+   C+ G I 
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIK 359

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           + + +F  +   G++PNVYTY+ ++ ALC+ G I  AH +F +M E GC P+   +N ++
Sbjct: 360 DGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVII 419

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +  ++        Q+  +M   G  AD  T   L D
Sbjct: 420 QGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 1/261 (0%)

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   FR M +    P +  +S +  ++ R G       +  E+  +G E +  + + L+
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  R +  L V +++ +LG E   +T+  L++  C +GK++  + + + M+ +G  
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+N+I   +SK G  N A     +M+ + C PN V Y+ L+  +      D    +
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M      PNV TY  L+  YC +     A + + E +  K L P    +  ++  L 
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL-RKGLVPDIVTFTTIISGLC 283

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           RAG+    ++L   +   G T
Sbjct: 284 RAGRPLAAQQLFRYICAHGHT 304


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 18/371 (4%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R     + T++ L++        +EA   F RM++ GC PD + +  +I  LC     + 
Sbjct: 133 RGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINI 192

Query: 237 AQSFFDSLKDKF-------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG------- 282
           A      + +         +P+VI Y  +V G C+ G   EA+++F EMK  G       
Sbjct: 193 ALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEML 252

Query: 283 ---IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
              +QP++ T++++ID LC+ G++  A  +   M+E G  P+ +T+N+L+          
Sbjct: 253 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN 312

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
              +++  M   GCE D I+YN LI+ + K  K+E+A+K+ N M+  G  PN  T++ + 
Sbjct: 313 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 372

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
           + I   G V+ A +++  MK      N+ TY I +     +      +KL  E++ +  +
Sbjct: 373 KGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFK 432

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
             +     LI   C  G    A++   ++  E   +P    Y +++    R GQ+ K   
Sbjct: 433 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEG-HEPNVVTYTIMIHGFCREGQVDKANV 491

Query: 520 LVEKMVDRGFT 530
           L++KM   G T
Sbjct: 492 LIQKMEANGCT 502



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 46/340 (13%)

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAF----------NRMEEYGCAPDKIAFSIVISI 227
           N +  V T++I+V    + G   EA   F          N M + G  PD + F+++I  
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDT 269

Query: 228 LCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
           LC++ +  EA+     + +    PD++ Y +L+ G+C  G+++ A  +F  M   G +P+
Sbjct: 270 LCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPD 329

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           V +Y+++I+   +  ++  A  ++ EML VG  PN IT+++L++    A + +   ++++
Sbjct: 330 VISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS 389

Query: 347 QMKRLGCEADTITY-----------------------------------NFLIDCHCKDG 371
            MK  G   ++ TY                                   N LID  CK G
Sbjct: 390 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 449

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           KLE A ++   +  +G  PN  T+ ++     + G V+ A+ +  KM+   C P+ +TYN
Sbjct: 450 KLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYN 509

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            LM+ F  S   + V++L   M + +V P+  T  I++ M
Sbjct: 510 TLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDM 549



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 153/312 (49%), Gaps = 18/312 (5%)

Query: 234 ASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           A+ A  FF   ++    P +  + +L+ G  +  + S+   ++ +M+++G+  +  T +I
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++ LC   ++      FA +L  G  PN +T+N L++      R  +  +++ +M++LG
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKV----LNSMVRK--GCNPNASTFNMIFRCISKLG 406
           C  D +TY  LI   C  G +  A+K+    LN + R    C PN  T+N+I   + K+G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 407 DVNGAHRMYGKMK----------DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
             + A +++ +MK          D   +P+ VT+N+L+             KL   M E+
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
            + P++ TY  LI  +C +G  N+A +    M  + C +P    Y +++    +  ++++
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC-EPDVISYNVLINGYSKTLKVEE 348

Query: 517 HEELVEKMVDRG 528
             +L  +M+  G
Sbjct: 349 AMKLYNEMLLVG 360



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 144/305 (47%), Gaps = 3/305 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ +I+   K  +   A   + +M    +   + T++ L+  +   G    A   
Sbjct: 258 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 317

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
           F  M   GC PD I+++++I+   +  +  EA   ++  L     P+VI Y +L++G   
Sbjct: 318 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 377

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG + +A+++F  MK  GI  N YTY I +D LC+   +  A  +F E+     +     
Sbjct: 378 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 437

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            N L+    KA + E   +++ ++   G E + +TY  +I   C++G+++ A  ++  M 
Sbjct: 438 LNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME 497

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+  T+N + R   +   +    ++  +M      P+ +T +I++ M +  +   
Sbjct: 498 ANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQ 557

Query: 445 MVLKL 449
             L L
Sbjct: 558 ECLHL 562



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 9/251 (3%)

Query: 139 TARPEFVH------SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           +AR  FV        PD+  Y+ +IN   K  + + A    + M        V T+  L+
Sbjct: 313 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 372

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FE 249
           +    AG   +A   F+ M+ +G A +   + I +  LC+     EA   F  LK   F+
Sbjct: 373 KGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFK 432

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
            ++     L+ G C+AG +  A  +F ++   G +PNV TY+I+I   CR GQ+ +A+ +
Sbjct: 433 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVL 492

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +M   GC P+ IT+N LMR   ++++ E+V+Q+ ++M +     D IT + ++D   K
Sbjct: 493 IQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 552

Query: 370 DGKLEDAIKVL 380
           D K ++ + +L
Sbjct: 553 DEKYQECLHLL 563



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 125/249 (50%), Gaps = 17/249 (6%)

Query: 298 CRCGQITRAHDV--FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           C+ G +T  H +  F  M+     P+  +FN+L+    K     +V  +YNQM+  G  +
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D  T N L++C C   +L +       ++R+G +PN  T+N + + +     ++ A R++
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM------EENEVEPNVNTYRILI 469
            +M+ L C P+ VTY  L++    + + ++ LKL +EM       E   +PNV TY I++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 470 TMYCGMGHWNNAYKYIREM---------IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
              C +G  + A +   EM         + ++ L+P    + +++  L + G++ + ++L
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 521 VEKMVDRGF 529
           +  M++ G 
Sbjct: 283 LGVMIESGI 291


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 186/386 (48%), Gaps = 8/386 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I+    +  F      +D M+     +    F ++ + Y +A L  +AV  F+RM 
Sbjct: 63  FYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMA 122

Query: 211 -EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD----KFEPDVIVYTNLVRGWCRA 265
            E+ C     +F+ V++++ ++     A  F++ +         P+V+ +  +++  C+ 
Sbjct: 123 YEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKV 182

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + +A ++FR+M ++  QP+VYTY  ++D LC+  +I  A  +  EM   GC P+ +TF
Sbjct: 183 GLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTF 242

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+    K     +V ++ + M   GC  + +TYN LI   C  GKLE AI +L+ MV 
Sbjct: 243 NVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS 302

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTD 444
             C PN  T+  I   + K G      R+   M++     N   Y+ L+  +F   KS +
Sbjct: 303 SKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQE 362

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             ++L KEM   E E N   Y  +I   C  G  + A + + EM   +C KP +  Y  +
Sbjct: 363 -AMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC-KPNAYTYSSL 420

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           ++    AG   K  E+ + M    FT
Sbjct: 421 MKGFFEAGNGHKAIEMWKDMAKHNFT 446



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 180/404 (44%), Gaps = 38/404 (9%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R  +   H I   K  N+   V TF+++++   + GL  +AV  F  M    C PD   +
Sbjct: 149 RALEFYNHVIG-AKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTY 207

Query: 222 SIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
             ++  LC+  R  EA S  D ++ D   P  + +  L+ G C+ G+++   ++   M +
Sbjct: 208 CTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFL 267

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR--- 337
            G  PN  TY+ +I  LC  G++ +A  +   M+   C PN +T+  ++   VK  R   
Sbjct: 268 KGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALD 327

Query: 338 --------------------------------TEKVLQVYNQMKRLGCEADTITYNFLID 365
                                           +++ +Q++ +M    CE +TI Y+ +ID
Sbjct: 328 GARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVID 387

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C+DGK ++A++VL+ M    C PNA T++ + +   + G+ + A  M+  M       
Sbjct: 388 GLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQ 447

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N V Y++L+            + +  +M     +P+V  Y  +I      G   +A +  
Sbjct: 448 NEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLY 507

Query: 486 REMI-EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            EM+ +E   +P    Y ++L  L +   + +  +L+  M+DRG
Sbjct: 508 NEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRG 551



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 165/328 (50%), Gaps = 7/328 (2%)

Query: 147 SPDLYHEMINLAGKVRQFDLA--WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP  ++ +IN  G  ++ DLA     +D M  +       T++ L+      G   +A+ 
Sbjct: 238 SPVTFNVLIN--GLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAIS 295

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
             +RM    C P+ + +  +I+ L ++ RA +       ++++ +  +  VY+ L+ G  
Sbjct: 296 LLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLF 355

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G   EA ++F+EM +   + N   YS VID LCR G+   A +V +EM    C+PN+ 
Sbjct: 356 KEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAY 415

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+++LM+   +A    K ++++  M +     + + Y+ LI   CKDGK+++A+ V   M
Sbjct: 416 TYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQM 475

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM--KDLKCEPNTVTYNILMQMFATSK 441
           + KGC P+   +  +   +S  G V  A ++Y +M  ++   +P+ VTYNIL+       
Sbjct: 476 LGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQS 535

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILI 469
           S    + L   M +   +P++ T  I +
Sbjct: 536 SISRAIDLLNSMLDRGCDPDLVTCIIFL 563



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 133/256 (51%), Gaps = 5/256 (1%)

Query: 151 YHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +IN L  + R  D A   + LM+ R   +    +S L+    + G + EA+  F  M
Sbjct: 312 YGTIINGLVKQGRALDGA-RVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEM 370

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
               C  + I +S VI  LCR  +  EA      +  ++ +P+   Y++L++G+  AGN 
Sbjct: 371 TVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNG 430

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A  ++++M       N   YS++I  LC+ G++  A  V+A+ML  GC+P+ + + ++
Sbjct: 431 HKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSM 490

Query: 329 MRVHVKASRTEKVLQVYNQM--KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +     A   E  LQ+YN+M  +    + D +TYN L++  CK   +  AI +LNSM+ +
Sbjct: 491 INGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDR 550

Query: 387 GCNPNASTFNMIFRCI 402
           GC+P+  T  +  R +
Sbjct: 551 GCDPDLVTCIIFLRTL 566


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 181/379 (47%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++++++   K+++FDL     + M+   +   + T++IL+  + R    + A+    +M 
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P  +  S +++  C  +R S+A +  D + +  + PD I +T L+ G       S
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +   M   G QPN+ TY +V++ LC+ G I  A ++  +M     E + + FN ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K    +  L ++ +M+  G   + +TY+ LI C C  G+  DA ++L+ M+ K  N
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  TFN +     K G    A +++  M     +P+  TYN L+  F      D   ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M   +  P+++TY  LI  +C      +  +  REM   + L   +  Y  ++Q L 
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQGLF 371

Query: 510 RAGQLQKHEELVEKMVDRG 528
             G     +++ ++MV  G
Sbjct: 372 HDGDCDNAQKVFKQMVSDG 390



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 175/337 (51%), Gaps = 2/337 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+        A+EAV   +RM + GC P+ + + +V++ LC++     A +  + +
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +  K E DV+++  ++   C+  ++ +A  +F+EM+  GI+PNV TYS +I  LC  G+ 
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  + ++M+E    PN +TFN L+   VK  +  +  ++++ M +   + D  TYN L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C   +L+ A ++   MV K C P+  T+N + +   K   V     ++ +M     
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             +TVTY  L+Q        D   K+ K+M  + V P++ TY IL+   C  G    A +
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            + + +++  +K    +Y  +++ + +AG++    +L
Sbjct: 417 -VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 188/385 (48%), Gaps = 2/385 (0%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R    H+   Y+ +IN   +  Q  LA   +  M     E ++ T S L+  Y      +
Sbjct: 38  RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 97

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +AV   ++M E G  PD I F+ +I  L    +ASEA +  D +  +  +P+++ Y  +V
Sbjct: 98  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C+ G+I  A  +  +M+ A I+ +V  ++ +ID+LC+   +  A ++F EM   G  
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN +T+++L+       R     Q+ + M       + +T+N LID   K+GK  +A K+
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + M+++  +P+  T+N +         ++ A +M+  M    C P+  TYN L++ F  
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           SK  +   +L +EM    +  +  TY  LI      G  +NA K  ++M+ +  + P   
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIM 396

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
            Y ++L  L   G+L+K  E+ + M
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYM 421



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 182/375 (48%), Gaps = 2/375 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K    DLA++ ++ M++  +E  V  F+ ++    +     +A++ F  ME
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + +S +IS LC   R S+A Q   D ++ K  P+++ +  L+  + + G   
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE++  +M    I P+++TY+ +I+  C   ++ +A  +F  M+   C P+  T+N L+
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   K+ R E   +++ +M   G   DT+TY  LI     DG  ++A KV   MV  G  
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++++   +   G +  A  ++  M+  + + +   Y  +++    +   D    L
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+PNV TY  +I+  C       AY  +++M E+  L P S  Y  +++   
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHL 511

Query: 510 RAGQLQKHEELVEKM 524
           R G      EL+ +M
Sbjct: 512 RDGDKAASAELIREM 526



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 145/278 (52%), Gaps = 1/278 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +  +  L+    +         +  +M+  GI  N+YTY+I+I+  CR  QI+ A  +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +M+++G EP+ +T ++L+  +    R    + + +QM  +G   DTIT+  LI     
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             K  +A+ +++ MV++GC PN  T+ ++   + K GD++ A  +  KM+  K E + V 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +N ++      +  D  L L KEME   + PNV TY  LI+  C  G W++A + + +MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           E+K + P    +  ++    + G+  + E+L + M+ R
Sbjct: 248 EKK-INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 163/359 (45%), Gaps = 7/359 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  RH    L +         RP  V     Y  +I+      ++  A   +  M
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVT----YSSLISCLCSYGRWSDASQLLSDM 246

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             + +   + TF+ L+  +V+ G   EA    + M +    PD   ++ +I+  C   R 
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 235 SEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            +A+  F+ +  KD F PD+  Y  L++G+C++  + +   +FREM   G+  +  TY+ 
Sbjct: 307 DKAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I  L   G    A  VF +M+  G  P+ +T++ L+       + EK L+V++ M++  
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + D   Y  +I+  CK GK++D   +  S+  KG  PN  T+N +   +     +  A+
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            +  KMK+    P++ TYN L++            +L +EM       + +T  ++  M
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 544



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 3/153 (1%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    I L G     + + A    D M+   +++ +  ++ ++    +AG   +    
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
           F  +   G  P+ + ++ +IS LC KR   EA +    +K D   PD   Y  L+R   R
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
            G+ + +  + REM+      +  T  +V + L
Sbjct: 513 DGDKAASAELIREMRSCRFVGDASTIGLVANML 545



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 1/146 (0%)

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           MV+    P+   FN +   I+K+   +    +  KM+ L    N  TYNIL+  F     
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
             + L L  +M +   EP++ T   L+  YC     ++A   + +M+E    +P +  + 
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFT 119

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
            ++  L    +  +   LV++MV RG
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRG 145


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 180/363 (49%), Gaps = 2/363 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +DLM    +      F+IL+  Y + G   +A+ AF  M + G  PD +++S VI ILC
Sbjct: 362 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 421

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  R  +A   F+ +  +   P++I +T+L+ G C  G   + E +  EM   GI P+  
Sbjct: 422 KTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 481

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
             + ++D LC+ G++  A D F  ++ +G +P+ +++N L+  +    + ++ ++  ++M
Sbjct: 482 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRM 541

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
             +G   D+ TYN L++ + K+G++EDA+ +   M RK     A T N++   + + G +
Sbjct: 542 VSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRI 601

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A  +Y KM D   +    TYN ++     +   D  L++ +++   E E +V T+ I+
Sbjct: 602 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIV 661

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I     +G  + A      M+    + P    Y ++++     G L++ + L   M   G
Sbjct: 662 INALLKVGRIDEAKSLFSAMVLRGPV-PDVITYSLMIKSHIEEGLLEESDNLFLSMEKNG 720

Query: 529 FTA 531
             A
Sbjct: 721 CAA 723



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 166/328 (50%), Gaps = 5/328 (1%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF----EPDVIVYTNLVRG 261
           F RM E G  PD  +++ +I  LC ++++ EA      +         P+V+ Y  ++ G
Sbjct: 150 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDG 209

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           + + G + +A  +F EM   G+ P+V TY+ +ID LC+   + +A  +   M + G  P+
Sbjct: 210 FFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           + T+N ++R +    + E+ +++  +M   G + D +TY+ LI  +CK G+  +A  V +
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
           SMVRKG  PN++ ++++    +  G +     +   M           +NIL+  +A   
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 389

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
           + D  +    EM +N + P+V +Y  +I + C  G   +A  +  +M+ E  L P    +
Sbjct: 390 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG-LSPNIISF 448

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             ++  L   G+ +K EEL  +M++RG 
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGI 476



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 196/467 (41%), Gaps = 77/467 (16%)

Query: 142 PEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSR---NVEITVDTFSILVRRYVRA 196
           PE  ++PD+  Y+ +I      ++   A   +  M +    N    V +++ ++  + + 
Sbjct: 154 PELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKE 213

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
           G   +A   F+ M   G  PD + ++ +I  LC+ +   +A +    + DK   PD   Y
Sbjct: 214 GEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTY 273

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
             ++RG+C  G + EA R+ ++M  +G+QP+V TYS++I   C+ G+   A  VF  M+ 
Sbjct: 274 NIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVR 333

Query: 316 VGCEPNSI-----------------------------------TFNNLMRVHVKASRTEK 340
            G +PNS                                     FN L+  + K    +K
Sbjct: 334 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDK 393

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF----- 395
            +  + +M++ G   D ++Y+ +I   CK G++EDA+   N MV +G +PN  +F     
Sbjct: 394 AMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIH 453

Query: 396 ------------------------------NMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
                                         N I   + K G V  A   +  +  +  +P
Sbjct: 454 GLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 513

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + V+YN L+  +      D  +K    M    + P+  TY  L+  Y   G   +A    
Sbjct: 514 DVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALY 573

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           REM   K +K  +    ++L  L +AG++    EL  KMVDRG   R
Sbjct: 574 REMF-RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLR 619



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 150/318 (47%), Gaps = 17/318 (5%)

Query: 227 ILCRKRRAS----EAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISE-------AERV 274
           IL R R  S    +A + FD L  +  P  V  + +++    RA + S        A  +
Sbjct: 19  ILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSL 78

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           F  M  +G+        I+I   C  G++  A   FA  L+ G    ++T N L++    
Sbjct: 79  FNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCD 138

Query: 335 ASRTEKVLQ-VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG---CNP 390
            +RT+  +  V+ +M  LG   D  +YN LI   C + K ++A+++L  M   G   C+P
Sbjct: 139 GNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSP 198

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
           N  ++N +     K G+V+ A+ ++ +M      P+ VTYN L+     +++ D  + + 
Sbjct: 199 NVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAIL 258

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           + M +  V P+  TY I+I  YC +G    A + +++M     L+P    Y +++Q   +
Sbjct: 259 QHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM-SGSGLQPDVVTYSLLIQYYCK 317

Query: 511 AGQLQKHEELVEKMVDRG 528
            G+  +   + + MV +G
Sbjct: 318 IGRCAEARSVFDSMVRKG 335



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 9/272 (3%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F D++    V+  V +++ L+  Y   G   E++   +RM   G  PD   ++ +++
Sbjct: 499 AQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLN 558

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDV----IVYTNLVRGWCRAGNISEAERVFREMKMAG 282
              +  R  +A + +   ++ F  DV    I    ++ G  +AG I  A  ++ +M   G
Sbjct: 559 GYFKNGRVEDALALY---REMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
            Q  + TY+ V+  LC    +  A  +F ++     E +  TF+ ++   +K  R ++  
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAK 675

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            +++ M   G   D ITY+ +I  H ++G LE++  +  SM + GC  ++   N+I R +
Sbjct: 676 SLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRL 735

Query: 403 SKLGDVNGAHRMYGKM--KDLKCEPNTVTYNI 432
            + GDV  A     K+  K+   E +T    I
Sbjct: 736 LEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 150/331 (45%), Gaps = 40/331 (12%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP+ V    + H +    G+V   D  +HF + M S  +   + +F+ L+      G   
Sbjct: 407 RPDVVSYSTVIHILCK-TGRVE--DAVYHF-NQMVSEGLSPNIISFTSLIHGLCSIGEWK 462

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLV 259
           +       M   G  PD I  + ++  LC++ R  EAQ FFD  +    +PDV+ Y  L+
Sbjct: 463 KVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLI 522

Query: 260 RGWC-----------------------------------RAGNISEAERVFREMKMAGIQ 284
            G+C                                   + G + +A  ++REM    ++
Sbjct: 523 DGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVK 582

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
               T +I++  L + G+I  A +++ +M++ G +    T+N ++    + S  ++ L++
Sbjct: 583 FCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 642

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           +  ++    E D  T++ +I+   K G++++A  + ++MV +G  P+  T++++ +   +
Sbjct: 643 FEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIE 702

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
            G +  +  ++  M+   C  ++   NI+++
Sbjct: 703 EGLLEESDNLFLSMEKNGCAADSHMLNIIVR 733


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 5/388 (1%)

Query: 146 HSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           HSP  +  +  ++L  K    D  W F      R  +  V +F I ++ +   G  ++  
Sbjct: 69  HSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR-TQFDVYSFWITIKAFCENGNVSKGF 127

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
               +ME  G +P+   ++I+I   CR     +A+  F  + D     +  +YT ++ G+
Sbjct: 128 ELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGF 187

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            + G   +   ++++MK+ G+ PN+YTY+ +I   CR G+++ A  VF E+ + G   N+
Sbjct: 188 FKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNA 247

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+N L+    +  +  K   +  +MKR      T T+N L+D  C  G+L+ A+  L  
Sbjct: 248 VTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +   G  P   T+N++    SK+G+ +    +  +M+D    P+ VTY ILM  F  S  
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDD 367

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +   ++   M+   + P+ +TY +LI   C  G+   A K  + M+E   L+P   +Y 
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMH-LQPNDVIYN 426

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            ++    +     K  + +E+MV  G T
Sbjct: 427 TMINGYCKECNSYKALKFLEEMVKNGVT 454



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 168/331 (50%), Gaps = 1/331 (0%)

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
           +++ L  +++  F  M   G +P   +F+  + +L +         FF     + + DV 
Sbjct: 49  LQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVY 108

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            +   ++ +C  GN+S+   +  +M+  G+ PNV+ Y+I+I+A CR G I +A  +F+ M
Sbjct: 109 SFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRM 168

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            ++G   N   +  ++    K    +   ++Y +MK +G   +  TYN LI  +C+DGKL
Sbjct: 169 DDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKL 228

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
             A KV + + ++G   NA T+N++   + + G V+ A  +  +MK     P T T+N+L
Sbjct: 229 SLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNML 288

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           M     +   D  L   ++++   + P + TY ILI+ +  +G+ +   + +REM E++ 
Sbjct: 289 MDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREM-EDRG 347

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           + P    Y +++    R+  ++K  E+   M
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 159/322 (49%), Gaps = 2/322 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           ++I++  + + G   +    + +M+  G  P+   ++ +I+  CR  + S A   FD + 
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K     + + Y  L+ G CR G +S+AE +   MK A I P   T+++++D LC  GQ+ 
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A     ++  +G  P  +T+N L+    K   +  V ++  +M+  G     +TY  L+
Sbjct: 300 KALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILM 359

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           +   +   +E A ++ + M R G  P+  T+ ++   +   G++  A ++Y  M ++  +
Sbjct: 360 NTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQ 419

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN V YN ++  +    ++   LK  +EM +N V PNV +Y   I + C  G    A + 
Sbjct: 420 PNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRL 479

Query: 485 IREMIEEKCLKPGSSVYEMVLQ 506
           ++EM E   LKP  S+   V Q
Sbjct: 480 LKEMTEAG-LKPPESLCSKVGQ 500


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 177/378 (46%), Gaps = 2/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   +   F  A+  ++ M +R    T+ T++ L+    +          F+ M 
Sbjct: 288 YNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDML 347

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           +    PD ++F+ ++   CR    SEA   FD LK +   P VI Y  L+ G C  G + 
Sbjct: 348 KSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLD 407

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+ +EM   G+ P+++TY+I+++   + G ++ A   F EML  G +P+   +N  +
Sbjct: 408 AALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRI 467

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              +K + T     +  +M   G   D ITYN  +   C+ G  E+A  +L +MV  G  
Sbjct: 468 VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLI 527

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  I     K G +  A  ++ +M      P+ VTY +L+   A  +  D+    
Sbjct: 528 PDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMY 587

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             +M E  V  NV TY  +I   C     + AYKY  EM EEK + P    Y +++ +  
Sbjct: 588 FSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEM-EEKGILPNKFSYTILINESC 646

Query: 510 RAGQLQKHEELVEKMVDR 527
             G  ++   L  +M+DR
Sbjct: 647 NMGYWEEALRLYREMLDR 664



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 169/357 (47%), Gaps = 2/357 (0%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           +M+   ++ TV T++ ++  Y + G   +A+   + M+E GC P+ + ++++++ L +K 
Sbjct: 205 MMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKG 264

Query: 233 RASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
              +A+   +  L          Y  L+ G+C+ G   EA  +  EM      P + TY+
Sbjct: 265 ELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYN 324

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            ++  LC+  Q+T     F++ML+    P+ ++FN+L+  + +     +   +++++K  
Sbjct: 325 TLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR 384

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
                 ITYN LI   C  G L+ A+++   M  +G  P+  T+ ++     KLG V+ A
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA 444

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              + +M     +P+   YN  +        T +   +++EM      P+V TY + +  
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHA 504

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C  G++  A   +  M+ +  L P    Y  ++    + G L+K  E+  +M+ +G
Sbjct: 505 LCQQGNFEEACDLLENMVSDG-LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG 560



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 172/398 (43%), Gaps = 44/398 (11%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF WV A+P+F  S  ++  ++++         A+  ++ + S  +   VD   +L+ 
Sbjct: 103 LRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVD---VLIA 159

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD 251
            +V   L       F++M   G  PD                          L+D+    
Sbjct: 160 GHVXCLLV------FDKMIRNGLLPD----------------VKNCNRILRVLRDE---- 193

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
                NL         +S+A+ V+  M+  GI+P V TY+ ++D+ C+ G++ +A ++ +
Sbjct: 194 -----NL---------LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLS 239

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EM E GC PN +T+N L+    K    E+   +  +M   G      TYN LI+  C+ G
Sbjct: 240 EMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKG 299

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
              +A  ++  MV +   P  ST+N +   + K   V G    +  M   K  P+ V++N
Sbjct: 300 LFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFN 359

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            L+  +  +        L  E++  ++ P V TY  LI   C  G+ + A +  +EM ++
Sbjct: 360 SLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ 419

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             L P    Y +++    + G +        +M+ +G 
Sbjct: 420 G-LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 204/426 (47%), Gaps = 17/426 (3%)

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
           VR V++   GV         + FF W   +  + H    Y  +I     V Q+   W  I
Sbjct: 89  VREVMKTDVGVNVK------MQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMI 142

Query: 172 -DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
            +++++    +T    S ++R    A + ++AV  F +++   C P   A++ +I +L  
Sbjct: 143 QEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMH 202

Query: 231 KRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + +  +    ++ + ++    PD + Y+ L+  +C+ G    A R+  EMK  G+QP   
Sbjct: 203 EGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAK 262

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+++I    +   +  A  +F EM    C P+  T+  L+R   KA R ++    +++M
Sbjct: 263 IYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEM 322

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI----SK 404
           +R GC  DT+  N +I+   K G+L+DA+K+   M    C P+  T+N I + +    S+
Sbjct: 323 RREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSR 382

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           + +++     + +MK     P+  TY+IL+  F  +  T+  + L +EM+E    P    
Sbjct: 383 ISEISS---WFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAA 439

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI        ++ A++  +E ++E C    + VY ++++ L +AG+L     L ++M
Sbjct: 440 YCSLIDALGKAKRYDIAHELFQE-LKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEM 498

Query: 525 VDRGFT 530
              G T
Sbjct: 499 NKLGCT 504



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 177/382 (46%), Gaps = 38/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S L+  + + G    A+   N M++ G  P    ++++I++  +      A   F+ +
Sbjct: 228 TYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEM 287

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + ++  PDV  YT L+RG  +AG   EA   F EM+  G +P+    + +I+ L + G++
Sbjct: 288 RHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRL 347

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTITYNF 362
             A  +F EM  + C P+ +T+N +++   ++ SR  ++   + +MK  G      TY+ 
Sbjct: 348 DDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSI 407

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNP-------------------------------- 390
           LID  CK  + E A+ +L  M  KG  P                                
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENC 467

Query: 391 ---NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              +A  + ++ + + K G ++ A  ++ +M  L C PN   YN LM   A +   D  L
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEAL 527

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
              + M+E+   P++N+Y I++      G  + A + +  M ++  +KP +  Y  VL  
Sbjct: 528 TTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM-KQSAIKPDAVSYNTVLGA 586

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           +  AG  ++  +L+++M   GF
Sbjct: 587 MSHAGLFEEAAKLMKEMNVLGF 608



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 167/344 (48%), Gaps = 2/344 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +  +Y  +I L  K+     A    + M+ +     V T++ L+R   +AG   EA + F
Sbjct: 260 TAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFF 319

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
           + M   GC PD +  + +I+ L +  R  +A   F+ +   +  P V+ Y  +++    +
Sbjct: 320 HEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFES 379

Query: 266 -GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              ISE    F  MK +GI P+ +TYSI+ID  C+  +  +A  +  EM E G  P    
Sbjct: 380 KSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAA 439

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+    KA R +   +++ ++K     +    Y  +I    K G+L+DA+ + + M 
Sbjct: 440 YCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMN 499

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           + GC PN   +N +   +++ G ++ A     +M++  C P+  +YNI++   A +    
Sbjct: 500 KLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 559

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             +++   M+++ ++P+  +Y  ++      G +  A K ++EM
Sbjct: 560 RAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEM 603



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 155/323 (47%), Gaps = 6/323 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y E+I   GK  +FD A++F   M+           + ++    +AG   +AV  
Sbjct: 294 PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKL 353

Query: 206 FNRMEEYGCAPDKIAFSIVISILCR-KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
           F  M    C P  + ++ +I  L   K R SE  S+F+ +K     P    Y+ L+ G+C
Sbjct: 354 FEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFC 413

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +     +A  +  EM   G  P    Y  +IDAL +  +   AH++F E+ E  C  +S 
Sbjct: 414 KTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKE-NCGSSSA 472

Query: 324 TFNNLMRVHV-KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
               +M  H+ KA R +  + ++++M +LGC  +   YN L+    + G L++A+  +  
Sbjct: 473 RVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRR 532

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC P+ +++N+I   ++K G  + A  M   MK    +P+ V+YN ++   + +  
Sbjct: 533 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGL 592

Query: 443 TDMVLKLKKEMEENEVEPNVNTY 465
            +   KL KEM     E ++ TY
Sbjct: 593 FEEAAKLMKEMNVLGFEYDLITY 615



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 144/297 (48%), Gaps = 6/297 (2%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA-GLA 199
           RP+ V    + + MIN  GK  + D A    + M +     +V T++ +++    +    
Sbjct: 328 RPDTV----VINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRI 383

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
           +E    F RM+  G +P    +SI+I   C+  R  +A    + + +K F P    Y +L
Sbjct: 384 SEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSL 443

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +    +A     A  +F+E+K      +   Y+++I  L + G++  A ++F EM ++GC
Sbjct: 444 IDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGC 503

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            PN   +N LM    +A   ++ L    +M+  GC  D  +YN +++   K G    A++
Sbjct: 504 TPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAME 563

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           +L++M +    P+A ++N +   +S  G    A ++  +M  L  E + +TY+ +++
Sbjct: 564 MLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILE 620



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 8/295 (2%)

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM---KMAGIQPNVYTYSIVIDALCRCG 301
           K  +E D   Y  L+R         E  ++ +EM    +  + P     S +I  L    
Sbjct: 112 KRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTP--MELSDIIRMLGNAK 169

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADTITY 360
            I++A  +F ++    C+P +  +N+++ + +   + EKV ++YN+M   G C  DT+TY
Sbjct: 170 MISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTY 229

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + LI   CK G+ + AI++LN M   G  P A  + M+     KL +V+GA  ++ +M+ 
Sbjct: 230 SALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRH 289

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
             C P+  TY  L++    +   D       EM      P+      +I      G  ++
Sbjct: 290 QYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDD 349

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRGFTARPL 534
           A K   EM   +C+ P    Y  +++ L     ++ +     E+M   G +  P 
Sbjct: 350 AVKLFEEMGTLQCI-PSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPF 403



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 1/237 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           + + MK   +  +  T+SIL+  + +     +A+     M+E G  P   A+  +I  L 
Sbjct: 389 WFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 448

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + +R   A   F  LK+        VY  +++   +AG + +A  +F EM   G  PNVY
Sbjct: 449 KAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVY 508

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ ++  L R G +  A      M E GC P+  ++N ++    K     + +++ + M
Sbjct: 509 AYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM 568

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           K+   + D ++YN ++      G  E+A K++  M   G   +  T++ I   I K+
Sbjct: 569 KQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKV 625


>gi|302758538|ref|XP_002962692.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
 gi|300169553|gb|EFJ36155.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
          Length = 495

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 205/440 (46%), Gaps = 42/440 (9%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           +    F  + AR  F      Y  ++    K   FD A    + M  R V   + +   +
Sbjct: 36  EAFDLFQEIHARG-FTAKASSYSYIVCGLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGI 94

Query: 190 VRRYVRAGLAAE-AVHAFNRME-EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           +  Y + G   E A+  F +ME EYGC P+  A++++++ L +K R  E +  F  +K+K
Sbjct: 95  LNGYCQDGGKMEQAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEK 154

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             EP+++ Y   + G C+AG + +A  V +EM      P+   YSI+I+A C+ G+I   
Sbjct: 155 GCEPNLVTYCTYILGLCKAGRVDDAMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEG 214

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             + AEMLE   +P+ + F++L+    KA R     +++ +M   GC+ D +  + ++D 
Sbjct: 215 EKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVILDS 274

Query: 367 HCKDGKLEDAIKVLNSMVRKGCN-PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             K G++  A++++N  V +    P+A + N + + I     V    R+   M      P
Sbjct: 275 FTKRGEVAQALELVNEFVDRDLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRP 334

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEM-------------------------------- 453
              +Y  L++     K+    L+L KEM                                
Sbjct: 335 LQCSYATLLRELCRRKNAVEALELVKEMRAAGYTSVDLSCVIEMLCKMKMVDEARGLYEE 394

Query: 454 ----EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
               ++ E+ P+V+TY IL+   CG G   +A    +EMIE   + P  + YE++++ L 
Sbjct: 395 MKSSQQQELLPSVSTYNILLERLCGEGRLGDAKDLFQEMIESGRI-PDVNSYEILVEALC 453

Query: 510 RAGQLQKHEELVEKMVDRGF 529
           +AG++ +  EL ++++  GF
Sbjct: 454 KAGKIFQGHELFKQLISLGF 473



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 172/365 (47%), Gaps = 5/365 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+ RNV   + T+ +L+    R     EA   F  +   G      ++S ++  L +   
Sbjct: 9   MQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVCGLAKYGY 68

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR-AGNISEAERVFREMKMA-GIQPNVYTY 290
             EA   F+ + + K  P +     ++ G+C+  G + +A ++FR+M+   G  PN Y Y
Sbjct: 69  FDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKMEGEYGCPPNTYAY 128

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           ++++  L +  ++    ++F EM E GCEPN +T+   +    KA R +  + V  +M +
Sbjct: 129 NVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDAMVVKKEMIQ 188

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
             C  D + Y+ LI+  CK GK+ +  K+L  M+ K   P+   F+ +  C+ K G    
Sbjct: 189 KSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRYGD 248

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE-PNVNTYRILI 469
           A+R++ +M +  C+P+ V  ++++  F         L+L  E  + ++  P+  +   L+
Sbjct: 249 AYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPLPSAGSINQLV 308

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                     +  + ++ M      +P    Y  +L++L R     +  ELV++M   G+
Sbjct: 309 KRIVVGDKVEDGVRLLKTMASRGS-RPLQCSYATLLRELCRRKNAVEALELVKEMRAAGY 367

Query: 530 TARPL 534
           T+  L
Sbjct: 368 TSVDL 372



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 129/257 (50%), Gaps = 3/257 (1%)

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           V REM+   + P + TY ++I+ L R  ++  A D+F E+   G    + +++ ++    
Sbjct: 5   VLREMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVCGLA 64

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD-GKLEDAIKVLNSMVRK-GCNPN 391
           K    ++ ++++ +M R        +   +++ +C+D GK+E AI++   M  + GC PN
Sbjct: 65  KYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKMEGEYGCPPN 124

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
              +N++   + K   V     M+ +MK+  CEPN VTY   +     +   D  + +KK
Sbjct: 125 TYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDAMVVKK 184

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM +    P+   Y ILI  +C +G      K + EM+E+K L+P    +  ++  L +A
Sbjct: 185 EMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKK-LQPDVVCFSSLVDCLDKA 243

Query: 512 GQLQKHEELVEKMVDRG 528
           G+      L  +M+++G
Sbjct: 244 GRYGDAYRLFRRMMEQG 260



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 9/288 (3%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD  +Y  +IN   KV +       +  M  + ++  V  FS LV    +AG   +A  
Sbjct: 192 SPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRYGDAYR 251

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGW 262
            F RM E GC PD +  S+++    ++   ++A    +   D+    P       LV+  
Sbjct: 252 LFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPLPSAGSINQLVKRI 311

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
                + +  R+ + M   G +P   +Y+ ++  LCR      A ++  EM   G    S
Sbjct: 312 VVGDKVEDGVRLLKTMASRGSRPLQCSYATLLRELCRRKNAVEALELVKEMRAAG--YTS 369

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA---DTITYNFLIDCHCKDGKLEDAIKV 379
           +  + ++ +  K    ++   +Y +MK    +       TYN L++  C +G+L DA  +
Sbjct: 370 VDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSVSTYNILLERLCGEGRLGDAKDL 429

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
              M+  G  P+ +++ ++   + K G +   H ++ ++  L   P++
Sbjct: 430 FQEMIESGRIPDVNSYEILVEALCKAGKIFQGHELFKQLISLGFIPSS 477



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 10/216 (4%)

Query: 159 GKVRQ-FDLAWHFIDLMKSRNVEI-TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           G+V Q  +L   F+D    R++ + +  + + LV+R V      + V     M   G  P
Sbjct: 279 GEVAQALELVNEFVD----RDLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRP 334

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + +++ ++  LCR++ A EA      ++      V + + ++   C+   + EA  ++ 
Sbjct: 335 LQCSYATLLRELCRRKNAVEALELVKEMRAAGYTSVDL-SCVIEMLCKMKMVDEARGLYE 393

Query: 277 EMKMAGIQ---PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           EMK +  Q   P+V TY+I+++ LC  G++  A D+F EM+E G  P+  ++  L+    
Sbjct: 394 EMKSSQQQELLPSVSTYNILLERLCGEGRLGDAKDLFQEMIESGRIPDVNSYEILVEALC 453

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           KA +  +  +++ Q+  LG    +     ++D  CK
Sbjct: 454 KAGKIFQGHELFKQLISLGFIPSSEMCATIVDGLCK 489


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 198/449 (44%), Gaps = 25/449 (5%)

Query: 102 STAHSISPSTVRHVIEK----SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI-- 155
           S A      ++R  + K    SC    G   L++ S F+ +    + +   DL+ +M+  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI---DLFSDMLRS 73

Query: 156 ----------NLAGKVRQF---DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
                      L G V +    DL       M+ + +   + +F+IL++ +        A
Sbjct: 74  RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
           +  F ++ + G  PD + F+ ++  LC + R SEA + F  + +    P+V+ +T L+ G
Sbjct: 134 LSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEP 320
            CR G I EA  +   M   G+QP   TY  ++D +C+ G    A D+  +M E+    P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIP 253

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N + ++ ++    K  R      ++ +M+  G   D  TYN +I   C  G+  DA ++L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M+ +  +P+  T+N +     K G    A  +Y +M      PNT+TY+ ++  F   
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D    +   M      PN+ T+  LI  YCG    ++  + + EM E   L   ++ 
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG-LVADTTT 432

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           Y  ++      G L    +L+++M+  G 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 12/358 (3%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TF+ L+    R G   EAV   +RM E G  P +I +  ++  +C+      A     
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLR 243

Query: 243 SLKD--KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            +++     P+V++Y+ ++   C+ G  S+A+ +F EM+  GI P+++TY+ +I   C  
Sbjct: 244 KMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G+ + A  +  EMLE    P+ +T+N L+   VK  +  +  ++Y++M   G   +TITY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + +ID  CK  +L+ A  +   M  KGC+PN  TFN +         ++    +  +M +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
                +T TYN L+  F      +  L L +EM  + + P++ T   L+   C  G   +
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483

Query: 481 AYKYIREMIEEK----------CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A +  + M + K           ++P    Y +++  L   G+  + EEL E+M  RG
Sbjct: 484 ALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 174/391 (44%), Gaps = 13/391 (3%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  +   A +    M+ + +   + T++ ++  +  +G  ++A      M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 268
            E   +PD + ++ +I+   ++ +  EA+  +D  L     P+ I Y++++ G+C+   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             AE +F  M   G  PN+ T++ +ID  C   +I    ++  EM E G   ++ T+N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-- 386
           +            L +  +M   G   D +T + L+D  C +GKL+DA+++   M +   
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 387 ---------GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
                    G  P+  T+N++   +   G    A  +Y +M      P+T+TY+ ++   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 D   ++   M      PNV T+  LI  YC  G  ++  +   EM   + +   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM-GRRGIVAN 615

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  Y  ++   R+ G +    ++ ++M+  G
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSG 646



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 177/403 (43%), Gaps = 15/403 (3%)

Query: 136 NWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           N  T   E    PDL  Y+ MI       ++  A   +  M  R +   V T++ L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
           V+ G   EA   ++ M   G  P+ I +S +I   C++ R   A+  F  +  K   P++
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I +  L+ G+C A  I +   +  EM   G+  +  TY+ +I      G +  A D+  E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-----------GCEADTITYN 361
           M+  G  P+ +T + L+       + +  L+++  M++            G E D  TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI     +GK  +A ++   M  +G  P+  T++ +   + K   ++ A +M+  M   
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              PN VT+  L+  +  +   D  L+L  EM    +  N  TY  LI  +  +G+ N A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               +EMI    + P +     +L  L    +L++   ++EK+
Sbjct: 636 LDIFQEMISSG-VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677


>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 845

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 188/441 (42%), Gaps = 48/441 (10%)

Query: 37  GDCVTNPNSSPDTPFLSPEETLIS--EKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSL 94
           G C  N +SS D        T+IS  E F    ++  R  P  +       NP + + ++
Sbjct: 238 GGCDYNVHSSDD-------RTIISSVEGFGKPSREMMRVTPGTAPTPRQYCNPGYVVENV 290

Query: 95  SLGFSQISTAHSISPSTVR-----HVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPD 149
           S    +    H+   +           + +  ++        L FF W+  +P F H   
Sbjct: 291 SGILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGH 350

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            Y  M+   G+ +QF      +D M     +    T++ L+  Y RA    EA++ F +M
Sbjct: 351 TYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQM 410

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +E GC                                  EPD + Y  L+    +AG + 
Sbjct: 411 QEAGC----------------------------------EPDRVTYCTLIDIHAKAGFLD 436

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +++ M+ AG+ P+ +TYS++I+ L + G +  AH +F EM+  GC PN +TFN ++
Sbjct: 437 IAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 496

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            +H KA   E  L++Y  M+  G + D +TY+ +++     G LE+A  V   M RK   
Sbjct: 497 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 556

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   + ++     K G+V  A + Y +M      PN  T N L+  F           L
Sbjct: 557 PDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 616

Query: 450 KKEMEENEVEPNVNTYRILIT 470
            + M    + P++ TY +L++
Sbjct: 617 LQSMLALGLHPSLQTYTLLLS 637



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 140/255 (54%), Gaps = 3/255 (1%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  G + + +TY+ ++  L R  Q    + +  EM++ GC+PN++T+N L+  + +A+  
Sbjct: 341 RQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYL 400

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            + + V+ QM+  GCE D +TY  LID H K G L+ A+ +   M   G +P+  T+++I
Sbjct: 401 NEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVI 460

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G +  AHR++ +M    C PN VT+NI++ + A +++ +  LKL ++M+    
Sbjct: 461 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 520

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           +P+  TY I++ +    G    A     EM + K   P   VY +++    +AG ++K  
Sbjct: 521 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVEKAW 579

Query: 519 ELVEKMVDRGFTARP 533
           +  ++M+  G   RP
Sbjct: 580 QWYQEMLHAGL--RP 592


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/559 (23%), Positives = 242/559 (43%), Gaps = 81/559 (14%)

Query: 25  FSSLAPLNEDDDGDCVTNPNSSP--DTPFLSPEET----LISEKFHSLIKDHHRKNPNPS 78
           F S   LN+++D +  + P SSP  D  F SP +     +    F+SLI+++        
Sbjct: 31  FHSSRTLNQNNDLENGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENY-------- 82

Query: 79  SNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRH----GIPLLQVLSF 134
                + + DF   SL    +++   + +       V+ K+ G  H     I L   +SF
Sbjct: 83  -----AYSSDFN--SLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSF 135

Query: 135 FNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLM---KSRNVEITVDTFSIL 189
                   EF   P +  ++ ++N+  +    D A  F + +   K  N+   V +F+++
Sbjct: 136 --------EFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLI 187

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKF 248
           ++   + GL   A+  F  M    C PD   +  ++  LC+  R  EA S  D ++ +  
Sbjct: 188 IKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGC 247

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P    +  L+ G C+ G+ +   ++   M + G  PN  TY+ +I  LC  G++ +A  
Sbjct: 248 FPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 307

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASR------------------------------- 337
           +   M+   C PN +T+  ++   VK  R                               
Sbjct: 308 LLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLF 367

Query: 338 ----TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
               +E+ ++++ +    GC+ +T+ Y+ L+D  C+D K ++A+K+L+ M  KGC PNA 
Sbjct: 368 KEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAF 427

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           TF+ + +   ++G+ + A  ++  M  + C  N V Y++L+            + +  +M
Sbjct: 428 TFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKM 487

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS----VYEMVLQQLR 509
                 P+V  Y  +I   C  G    A K   EM+   CL+P S      Y ++   L 
Sbjct: 488 LATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEML---CLEPDSQPDVITYNILFNALC 544

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +   + +  +L+  M+DRG
Sbjct: 545 KQSSISRAVDLLNSMLDRG 563



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 161/328 (49%), Gaps = 3/328 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP  ++ +IN   K   F      +D M  +       T++ L+      G   +A+   
Sbjct: 250 SPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 309

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           +RM    C P+++ +  +I+ L ++ RA +       ++++ +  +  VY+ LV G  + 
Sbjct: 310 DRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKE 369

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G   EA R+F+E    G + N   YS ++D LCR  +   A  + +EM + GC PN+ TF
Sbjct: 370 GKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTF 429

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           ++LM+   +   + K ++V+  M ++ C  + + Y+ LI   CKDGK+ +A+ V   M+ 
Sbjct: 430 SSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLA 489

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK--CEPNTVTYNILMQMFATSKST 443
            GC P+   ++ + + +   G V  A ++Y +M  L+   +P+ +TYNIL        S 
Sbjct: 490 TGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSI 549

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITM 471
              + L   M +   +P++ T  I + M
Sbjct: 550 SRAVDLLNSMLDRGCDPDLVTCNIFLRM 577



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 130/279 (46%), Gaps = 5/279 (1%)

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM- 313
           + +L+  +  + + +  E+V   M++     +  ++ ++  A  +     +A ++F  M 
Sbjct: 75  FYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMS 134

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM---KRLGCEADTITYNFLIDCHCKD 370
            E  C+P   +FN+++ V ++A   ++ L+ YN +   K +    + +++N +I   CK 
Sbjct: 135 FEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKL 194

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G +++AI++   M  + C P+A T+  +   + K+  ++ A  +  +M+   C P+  T+
Sbjct: 195 GLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATF 254

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           N+L+           V KL   M      PN  TY  LI   C  G  + A   +  M+ 
Sbjct: 255 NVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVS 314

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            KC+ P    Y  ++  L + G+      ++  M +RG+
Sbjct: 315 SKCV-PNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 184/357 (51%), Gaps = 3/357 (0%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A  ++  M  + V  TV+T++ L+  Y + G         + M++ G  P+ I++ 
Sbjct: 410 EVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYG 469

Query: 223 IVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I+ LC+ R+  +A+    D +     P+  +Y  L+   C    + +A R F EM  +
Sbjct: 470 SLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQS 529

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           GI   + TY+ +I+ L R G++ +A D+F +M   GC P+ IT+N+L+  + K+  T+K 
Sbjct: 530 GIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKC 589

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L++Y++MK LG +    T++ LI   C+   +    K+   M++    P+   +N +   
Sbjct: 590 LELYDKMKILGIKPTVGTFHPLI-YACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYS 648

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
            ++ G+V  A  ++ +M D   + + VTYN L+  +   +    +  L  +M+   + P 
Sbjct: 649 YAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPK 708

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           V+TY ILI   C +  +N AY + REM+E   L   S  Y+++   LR  G L++ +
Sbjct: 709 VDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI-SGLREEGMLREAQ 764



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 168/357 (47%), Gaps = 3/357 (0%)

Query: 173 LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR 232
           L   + + I   T+ IL+    R G   +A     ++ E G  P KI+++I+++  C++ 
Sbjct: 315 LFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEG 374

Query: 233 RASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
              +A    + ++++  EP+ I +  ++  +C  G +  AE   R M   G+ P V TY+
Sbjct: 375 DVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYN 434

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I+   + G   R  +   EM + G +PN I++ +L+    K  +      V   M   
Sbjct: 435 SLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR 494

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G   +   YN LI+  C   KL+DA +  + M++ G +    T+N +   + + G V  A
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKA 554

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             ++ +M    C P+ +TYN L+  +A S +T   L+L  +M+   ++P V T+  LI  
Sbjct: 555 EDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA 614

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            C         K  +EM++   L P   VY  ++      G + K   L ++MVD+G
Sbjct: 615 -CRKEGVVTMDKMFQEMLQMD-LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQG 669



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 177/350 (50%), Gaps = 5/350 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           +++ILV  Y + G   +A+    +MEE G  P++I F+ VIS  C       A+++   +
Sbjct: 362 SYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRM 421

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +K   P V  Y +L+ G+ + G+         EM  AGI+PNV +Y  +I+ LC+  ++
Sbjct: 422 VEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKL 481

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  V A+M+  G  PN+  +N L+      S+ +   + +++M + G +A  +TYN L
Sbjct: 482 IDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTL 541

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+   ++G+++ A  +   M  KGCNP+  T+N +    +K  +      +Y KMK L  
Sbjct: 542 INGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGI 601

Query: 424 EPNTVTYNILMQMFATSKSTDMVL-KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           +P   T++ L  ++A  K   + + K+ +EM + ++ P+   Y  +I  Y   G+   A 
Sbjct: 602 KPTVGTFHPL--IYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAM 659

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
              ++M+++       +   ++L  LR   ++ + + LV+ M  +G   +
Sbjct: 660 SLHQQMVDQGVDCDKVTYNSLILAYLRDR-RVSEIKHLVDDMKAKGLVPK 708



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 159/357 (44%), Gaps = 30/357 (8%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLV 259
           EA   ++ M + G  P   + + ++  L   R   +  + F D +     PD + Y   V
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
           +      ++ +   + + M   G+ P+V+ Y++V+  LC+  +I  A  +F EM++    
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN++T+N L+  + K    E+ L    +MK    E + +TYN L++  C  G+++DA +V
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284

Query: 380 LNSMVRKGCNPNA----------------------------STFNMIFRCISKLGDVNGA 411
           L  M   G  P                               T+ ++   + ++G +  A
Sbjct: 285 LLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKA 344

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  K+ +    P+ ++YNIL+  +         +   ++MEE  +EPN  T+  +I+ 
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISK 404

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +C  G  ++A  ++R M+ EK + P    Y  ++    + G   +  E +++M   G
Sbjct: 405 FCETGEVDHAETWVRRMV-EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 2/269 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN   K R+   A   +  M  R V    + +++L+          +A   F+ M 
Sbjct: 468 YGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMI 527

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
           + G     + ++ +I+ L R  R  +A+  F  +  K   PDVI Y +L+ G+ ++ N  
Sbjct: 528 QSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQ 587

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +   ++ +MK+ GI+P V T+  +I A CR   +     +F EML++   P+   +N ++
Sbjct: 588 KCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMI 646

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + +     K + ++ QM   G + D +TYN LI  + +D ++ +   +++ M  KG  
Sbjct: 647 YSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLV 706

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           P   T+N++ + +  L D NGA+  Y +M
Sbjct: 707 PKVDTYNILIKGLCDLKDFNGAYFWYREM 735



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 29/256 (11%)

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A D+++ M + G  P++ + N L+R  V +   EK L V+  +   G   D + Y  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
            +        L+   +++ SMV+ G  P+   +N++   + K+  +  A +++ +M    
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             PNTVTYN L+  +      +  L  K+ M+E  VE N+ TY  L+   CG G  ++A 
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 483 KYIREMIEEKCLKPGS----------------------------SVYEMVLQQLRRAGQL 514
           + + EM E     PG                               Y ++L  L R G++
Sbjct: 283 EVLLEM-EGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRI 341

Query: 515 QKHEELVEKMVDRGFT 530
           +K EE++ K+V+ G T
Sbjct: 342 EKAEEVLAKLVENGVT 357



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 1/126 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK- 247
           ++  Y   G   +A+    +M + G   DK+ ++ +I    R RR SE +   D +K K 
Sbjct: 645 MIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKG 704

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             P V  Y  L++G C   + + A   +REM   G+  NV     +I  L   G +  A 
Sbjct: 705 LVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQ 764

Query: 308 DVFAEM 313
            V +E+
Sbjct: 765 IVSSEL 770


>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
          Length = 486

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 177/399 (44%), Gaps = 38/399 (9%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L  +  F   + +P F HS   YH +I   G+ RQF      I  M+      T   F  
Sbjct: 114 LLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVD 173

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           ++  Y   G+  EA+ AF++M E+G  P    F++++ +L   +    A S F  L +  
Sbjct: 174 IIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFG 233

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
             P+   Y  L+R  C +  +S A  +F +M   G  P+V TYSI++  LCR  Q+  A 
Sbjct: 234 ISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTAL 293

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            V  EML  G  P+++T+N L+    +     +  ++ ++MK +GC  D I YN +I   
Sbjct: 294 GVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGF 353

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C++G+  DA ++L  M   GC PNA                                   
Sbjct: 354 CREGRALDACQILRDMPENGCLPNA----------------------------------- 378

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           ++Y  L+         D      +EM  N   P+++ Y +LIT  C  G    A + +  
Sbjct: 379 LSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACE-VLV 437

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           M+ ++ L P  S + ++L ++    Q +   ELV+K+ +
Sbjct: 438 MMTKQTLAPHESTWSVLLMRICEDSQTEA-RELVDKLSE 475



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 1/287 (0%)

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           S +  F+     Y  L+    RA      E + ++M+  G       +  +I+     G 
Sbjct: 124 SRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGM 183

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
              A   F +MLE G EP +  FN L+ V ++    E  L ++ ++   G   +T TYN 
Sbjct: 184 PNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNI 243

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI  HC   KL  A  + N M ++GC P+  T++++ + + +   V  A  +  +M +  
Sbjct: 244 LIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKG 303

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ +TYN L+       +     +L  +M+     P+V  Y  +IT +C  G   +A 
Sbjct: 304 YVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDAC 363

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + +R+M E  CL P +  Y  ++  L   G+  + ++ VE+M+  GF
Sbjct: 364 QILRDMPENGCL-PNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGF 409


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 172/353 (48%), Gaps = 8/353 (2%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V TF+ L++         EA   F RM++ GC P+ + +  +I  LC     + A  +  
Sbjct: 161 VVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQ 220

Query: 243 SLKD-------KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
            + +          P+VI Y+ ++ G C+ GN  EA  +F EM   G+QPNV T+S++ID
Sbjct: 221 EMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLID 280

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            LC+ GQ+ +A  +   M+++G  PN  T+ +L++            +++  M   G E 
Sbjct: 281 MLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEP 340

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D I+YN LI+ +CK  K+E+A+K+ N M+  G  P+  T  ++ + +   G V+ A  ++
Sbjct: 341 DVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF 400

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             +K      +     I +     +      +KL  E+E   ++ ++ T+  LI   C  
Sbjct: 401 RVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKA 460

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           G    A++   ++ EE  ++P +  Y  ++    + GQ+ K   L +KM + G
Sbjct: 461 GKLETAWELFEKLYEEG-IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 167/332 (50%), Gaps = 36/332 (10%)

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           N    V ++SI++    + G   EA+  FN M + G  P+ + FS++I +LC++ +  +A
Sbjct: 232 NCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKA 291

Query: 238 QSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           +   + + +    P++  YT+L++G+C  G+++ A+ +F  M   G +P+V +Y+++I+ 
Sbjct: 292 KKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE----------------- 339
            C+  ++  A  +F EML VG  P+  T   L++    A + +                 
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKD 411

Query: 340 ------------------KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
                             + ++++N+++    + D  T+  LID  CK GKLE A ++  
Sbjct: 412 LCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFE 471

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            +  +G  P+A  ++ +     K G V+ A+ ++ KM++  C P+ +TY+ILM+ F  S 
Sbjct: 472 KLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESN 531

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
             + V++L   M E +V P+   Y I+  M C
Sbjct: 532 KLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVC 563



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 157/325 (48%), Gaps = 16/325 (4%)

Query: 215 APDKIAFSIVISILCRKRR-----ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           +P++I+F   I +   K +      ++A  FFD +       +  +  L+ G  +  + S
Sbjct: 53  SPERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMR----SIFSFNRLLAGLAKIEHYS 108

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +   ++++M +AG+ P++ T +I+I+ LC   +I       A ++  G  P+ +TF  L+
Sbjct: 109 QVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLI 168

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--- 386
           +      R  +  +++ +M++LGC  + +TY  LI   C  G +  A+K    M+     
Sbjct: 169 KGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSP 228

Query: 387 ---GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
               C PN  ++++I   + K+G+   A  ++ +M D   +PN VT+++L+ M       
Sbjct: 229 YVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQV 288

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
               KL + M +  + PN+ TY  LI  +C +G  N+A +    M   K  +P    Y M
Sbjct: 289 IKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM-PSKGYEPDVISYNM 347

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++    +  ++++  +L  +M+  G
Sbjct: 348 LINGYCKTLKVEEAMKLFNEMLHVG 372



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 119/226 (52%), Gaps = 1/226 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M S+  E  V ++++L+  Y +     EA+  FN M   G  PD     +++  L    +
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 234 ASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A+  F  +K    P D+ +    + G C+ G I EA ++F E++   ++ ++ T+  
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID LC+ G++  A ++F ++ E G +P+++ +++++    K  + +K   ++ +M+  G
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           C  D ITY+ L+    +  KLE  +++L+ M+ K   P+   + ++
Sbjct: 513 CSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIV 558



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           ++S N+++ ++TF  L+    +AG    A   F ++ E G  PD +A+S +I   C+K +
Sbjct: 438 LESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQ 497

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A   F  +++    PD+I Y+ L+RG+  +  + +  ++   M    + P+   Y+I
Sbjct: 498 VDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAI 557

Query: 293 VIDALCR 299
           V D +C+
Sbjct: 558 VEDMVCK 564


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A+     + SR V   V T+S+L+    R G   EA   F+ ++E G  P+   ++ +IS
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C++    +A    + +  K   PD++ Y  L+ G C+AG I  A+ +F +++  G+ P
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  TY+ ++D  C+    T A  +  EML  G  P++  +N ++    K  + EK L ++
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 754

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M   G  A T+++N LI+ +CK GKL++A  +L  M+ K   PN  T+  +     K 
Sbjct: 755 QEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 813

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G +  A R++ +M++    P   TY  L+  +    +   V  L +EM    +EP+  TY
Sbjct: 814 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTY 873

Query: 466 RILITMYCGMGHWNNAYK-----YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            ++I  YC  G+   A K      ++ M  +   + G     ++ +  + AG + +  E+
Sbjct: 874 YVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEV 933

Query: 521 VEKMVDRGFTA 531
           +  MV  G+ +
Sbjct: 934 LRSMVKFGWVS 944



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 188/399 (47%), Gaps = 38/399 (9%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILV----------------RRYVRAGLAAEAV------- 203
           A+  +D MK R +  TV T+S+++                R  V  GL   AV       
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 459

Query: 204 -HA-----------FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEP 250
            HA             RM E G  PD   ++ +I   C+ +R  EA+++  + L+ +  P
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +   Y   + G+ +AG +  A+R F EM   G+ PNV  Y+ +I+  C+ G +T A  VF
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 579

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
             +L      +  T++ L+    +  +  +   ++++++  G   +  TYN LI   CK 
Sbjct: 580 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 639

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G ++ A ++L  M  KG NP+  T+N++   + K G++  A  ++  ++     PN VTY
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             ++  +  SK+     +L +EM    V P+   Y +++   C    +  A    +EM+E
Sbjct: 700 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 759

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +      S  +  +++   ++G+LQ+   L+E+M+++ F
Sbjct: 760 KGFASTVS--FNTLIEGYCKSGKLQEANHLLEEMIEKQF 796



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 175/385 (45%), Gaps = 43/385 (11%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+  ++R G   +A    + M   G   + I ++ +++ +C+  +  +A      +
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +K  EPD   Y+ L+ G CR  N++ A  +  EMK   + P V TYS++I+ LCRCG +
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
              + +  EM+  G +PN++ +  LM  H K  R E+   +  +M+  G   D   YN L
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   CK  ++E+A   L  M+ +   PNA T+       SK G++  A R + +M     
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552

Query: 424 EPN-----------------------------------TVTYNILMQMFATSKSTDMVLK 448
            PN                                     TY++L+   + +        
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 612

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK---PGSSVYEMVL 505
           +  E++E  + PN  TY  LI+  C  G+ + A     +++EE C+K   P    Y +++
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA----SQLLEEMCIKGINPDIVTYNILI 668

Query: 506 QQLRRAGQLQKHEELVEKMVDRGFT 530
             L +AG++++ + L + +  RG T
Sbjct: 669 DGLCKAGEIERAKNLFDDIEGRGLT 693



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 189/418 (45%), Gaps = 37/418 (8%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +++ ++N   K  + + A   +  M  + VE    T+S+L+  + R    A A    + M
Sbjct: 348 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 407

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           ++   AP  + +S++I+ LCR        +   + + +  +P+ +VYT L+    + G +
Sbjct: 408 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 467

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            E+  +   M+  GI P+V+ Y+ +I   C+  ++  A     EMLE    PN+ T+   
Sbjct: 468 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 527

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD------------------ 370
           +  + KA   E   + +N+M   G   +   Y  LI+ HCK+                  
Sbjct: 528 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 587

Query: 371 -----------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
                            GK+ +A  + + +  KG  PNA T+N +     K G+V+ A +
Sbjct: 588 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 647

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +  +M      P+ VTYNIL+     +   +    L  ++E   + PN  TY  ++  YC
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
              +   A++ + EM+  + + P + +Y ++L    +  + +K  +L ++M+++GF +
Sbjct: 708 KSKNPTAAFQLLEEML-LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS 764



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 174/389 (44%), Gaps = 24/389 (6%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  +    L  +++    K  + +L W   D M +  V   V T++ ++  + + G   
Sbjct: 186 RPSLLSCNSLLGDLL----KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVK 241

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A      M E                  + R   EA     S+ DK   PD+  Y  L+
Sbjct: 242 DAKRVLLEMGE------------------KARLLDEAIELKRSMVDKGLVPDLYTYDILI 283

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+C      EA+ +  EM   G++P   TY+ +ID   R G I +A  +  EM+  G E
Sbjct: 284 NGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE 343

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            N I +N L+    KA + EK L++  +M   G E D+ TY+ LI+ HC+   +  A ++
Sbjct: 344 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 403

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
           L+ M ++   P   T+++I   + + G++ G + +  +M     +PN V Y  LM   A 
Sbjct: 404 LDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAK 463

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
               +    + + M E  + P+V  Y  LI  +C       A  Y+ EM+E + L+P + 
Sbjct: 464 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR-LRPNAH 522

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            Y   +    +AG+++  +    +M+  G
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCG 551



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 157/333 (47%), Gaps = 19/333 (5%)

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAER 273
           +P+ + F +++    +     EA + F   K+ +F P ++   +L+    +   +    +
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE-----------------MLEV 316
           VF  M    + P+VYTY+ +I A C+ G +  A  V  E                 M++ 
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P+  T++ L+       R+ +   +  +M  +G + + ITYN LID   + G +E A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
            ++ + MV  G   N   +N +   + K G +  A  +  +M +   EP++ TY++L++ 
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
               ++     +L  EM++ ++ P V TY ++I   C  G+       +REM+    LKP
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-LKP 449

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            + VY  ++    + G++++   ++E+M ++G 
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGI 482



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 147/314 (46%), Gaps = 13/314 (4%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +I+   K  + + A +  D ++ R +     T++ +V  Y ++     A  
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
               M   G  PD   ++++++  C++ +  +A   F  + +K     + +  L+ G+C+
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCK 777

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G + EA  +  EM      PN  TY+ +ID  C+ G +  A  ++ EM E    P + T
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 837

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+  +       +V  ++ +M   G E D +TY  +ID +C++G + +A K+ + ++
Sbjct: 838 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 897

Query: 385 RKGCNPNASTFNM-------IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM--- 434
            KG  P  S F +       I R     G+++ A  +   M       NT +   L+   
Sbjct: 898 VKGM-PMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGN 956

Query: 435 QMFATSKSTDMVLK 448
           Q  A S+ +D +LK
Sbjct: 957 QNGANSEDSDNLLK 970



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 10/245 (4%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  +Y+ ++N   K  +F+ A      M  +    TV +F+ L+  Y ++G   EA H 
Sbjct: 729 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHL 787

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              M E    P+ + ++ +I   C+     EA+  +  ++++   P    YT+L+ G+  
Sbjct: 788 LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHN 847

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI- 323
            GN+SE   +F EM   GI+P+  TY ++IDA CR G +  A  +  E+L  G    S  
Sbjct: 848 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGF 907

Query: 324 -----TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
                T + + R    A   ++  +V   M + G  ++T +   L+D +      ED+  
Sbjct: 908 RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDN 967

Query: 379 VLNSM 383
           +L  M
Sbjct: 968 LLKQM 972



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 90/192 (46%), Gaps = 22/192 (11%)

Query: 363 LIDCHCKDGKLEDAIKVLNSMVR--KGCN--PNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           LI C  ++   +  + VL S+V+  + CN  PN+  F+M+     K+G +  A  ++   
Sbjct: 123 LIKCIIRNS--DSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGP 180

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           K+ +  P+ ++ N L+         ++  K+   M  ++V P+V TY  +I+ +C +G+ 
Sbjct: 181 KNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNV 240

Query: 479 NNAYKYIREMIE----------------EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            +A + + EM E                +K L P    Y++++       + ++ + ++ 
Sbjct: 241 KDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLL 300

Query: 523 KMVDRGFTARPL 534
           +M+D G    P+
Sbjct: 301 EMIDVGLKPEPI 312


>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
          Length = 551

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 184/399 (46%), Gaps = 9/399 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMIN-LAG---KVRQFDLAWHFIDLMKSRNVE-ITVDTFSI 188
           FF W + +  + H P  Y+++I+ L+G   K RQF +  + +D MK      + V+    
Sbjct: 128 FFAWASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLE 187

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R Y    L      A  R       P+  A ++++   C+     EA++ F  +K K 
Sbjct: 188 ILRAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKL 247

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
             +   Y+ L  GWCRA +  +A +V  EM      P  +TY   I++ C  G ++ A +
Sbjct: 248 LGNAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARE 307

Query: 309 VFAEMLEVGC---EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +F  M   G     P + T++ ++    KA R E+  ++ + M+  GC  D  TY  LI+
Sbjct: 308 LFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIE 367

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C  G+L+ A +VL+ M R G  P+  T+N     +  L + + A  +  +M +  CEP
Sbjct: 368 GMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEP 427

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  TYN+LM MF         L +  EM++   +  ++TY I+I      G    A   +
Sbjct: 428 SVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYGLFDCGETEYATALL 487

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            E+I    +K     ++ ++ +L   G L     L E M
Sbjct: 488 DEVINRD-MKLSYKKFDAIMLRLSAVGNLGAIHRLSEHM 525



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 21/276 (7%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGC---APDKIAFSIVISILCRKRRASEAQSFF 241
           T+   +  +  AGL +EA   F  M   G    +P    +SI+I  L +  R  E     
Sbjct: 288 TYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELL 347

Query: 242 DSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             ++     PDV  Y +L+ G C  G +  A RV  EM  AG  P++ TY+  ++ LC  
Sbjct: 348 SDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSL 407

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
                A ++   M+E  CEP+  T+N LM +  +     + L ++ +M + GC+    TY
Sbjct: 408 RNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTY 467

Query: 361 NFLI----DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             +I    DC    G+ E A  +L+ ++ +    +   F+ I   +S +G++   HR+  
Sbjct: 468 EIMIYGLFDC----GETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLSE 523

Query: 417 KMKDLKCEPNTVTYNILM-QMFATSKSTDMVLKLKK 451
            M+          YN+ M + FA ++    +  ++K
Sbjct: 524 HMRKF--------YNVAMSRRFAITQKKKSIGLIRK 551


>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
          Length = 551

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 184/399 (46%), Gaps = 9/399 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMIN-LAG---KVRQFDLAWHFIDLMKSRNVE-ITVDTFSI 188
           FF W + +  + H P  Y+++I+ L+G   K RQF +  + +D MK      + V+    
Sbjct: 128 FFAWASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLE 187

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R Y    L      A  R       P+  A ++++   C+     EA++ F  +K K 
Sbjct: 188 ILRAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKL 247

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
             +   Y+ L  GWCRA +  +A +V  EM      P  +TY   I++ C  G ++ A +
Sbjct: 248 LGNAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARE 307

Query: 309 VFAEMLEVG---CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +F  M   G     P + T++ ++    KA R E+  ++ + M+  GC  D  TY  LI+
Sbjct: 308 LFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIE 367

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C  G+L+ A +VL+ M R G  P+  T+N     +  L + + A  +  +M +  CEP
Sbjct: 368 GMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEP 427

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  TYN+LM MF         L +  EM++   +  ++TY I+I      G    A   +
Sbjct: 428 SVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYGLFDCGETEYATALL 487

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            E+I    +K     ++ ++ +L   G L     L E M
Sbjct: 488 DEVINRD-MKLSYKKFDAIMLRLSAVGNLGAIHRLSEHM 525



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 22/276 (7%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYG---CAPDKIAFSIVISILCRKRRASEAQSFF 241
           T+   +  +  AGL +EA   F  M   G    +P    +SI+I  L +  R  E     
Sbjct: 288 TYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELL 347

Query: 242 DSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             ++     PDV  Y +L+ G C  G +  A RV  EM  AG  P++ TY+  ++ LC  
Sbjct: 348 SDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSL 407

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
                A ++   M+E  CEP+  T+N LM +  +     + L ++ +M + GC+    TY
Sbjct: 408 RNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTY 467

Query: 361 NFLI----DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             +I    DC    G+ E A  +L+ ++ +    +   F+ I   +S +G++   HR+  
Sbjct: 468 EIMIYGLFDC----GETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLSE 523

Query: 417 KMKDLKCEPNTVTYNILM-QMFA-TSKSTDMVLKLK 450
            M+          YN+ M + FA T K   + L+ K
Sbjct: 524 HMRKF--------YNVAMSRRFAITQKKKSIGLRRK 551


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 214/458 (46%), Gaps = 15/458 (3%)

Query: 39  CVTNPNS-SPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIP---SL 94
           C T+ +S S  T   S    L+S   H L    H+KNP PS      +          S+
Sbjct: 32  CFTSYSSFSNSTTLYSQLHNLVSSFNHLL----HQKNPTPSIIQFGKILGSLVKANHYSI 87

Query: 95  SLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEM 154
            +   +    + I+ + V   I  +C  + G   L    F N +    E    PD     
Sbjct: 88  VVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYE----PDAITLT 143

Query: 155 INLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
             + G   + D+  A HF D + +   ++   ++  L+    + G    A+    R++  
Sbjct: 144 TLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGK 203

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
               D + ++ +I  +C+ +  ++A  F+  +  K   P V+ Y  L+ G C  G + +A
Sbjct: 204 LVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDA 263

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             +  +M +  I P VYT+SI++DA C+ G++  A +VF  M++   +PN +T+N+LM  
Sbjct: 264 IGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNG 323

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +   +   K   ++N M ++G   D  +Y+ +I   CK   +++A+K+   M  K   P+
Sbjct: 324 YCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPD 383

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+N +   + K G ++ A ++ G+M D    PN +TYN L+     +   D  ++L  
Sbjct: 384 VVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLT 443

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +++++ ++P+V TY ILI   C  G   +A K   +++
Sbjct: 444 KLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVL 481



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 167/355 (47%), Gaps = 2/355 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+   +   + T SIL+  + + G  + +   F+ + + G  PD I  + +I  LC K  
Sbjct: 95  MEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A  F D  L   F+ + + Y  L+ G C+ G    A  + R +    ++ +V  Y+ 
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID +C+   +  A D ++EM+     P  +T+N L+       + +  + + ++M    
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
                 T++ L+D  CK+GK+++A  V   M++K   PN  T+N +      + +VN A 
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  M  +   P+  +Y+I++  F   K  D  +KL +EM   ++ P+V TY  LI   
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           C  G  + A K I EM  ++   P    Y  +L  L +   + K  EL+ K+ D 
Sbjct: 395 CKSGRISYALKLIGEM-HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDH 448



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 128/236 (54%), Gaps = 1/236 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M   N+  TV TFSILV  + + G   EA + F  M +    P+ + ++ +++  C    
Sbjct: 270 MILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE 329

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            ++A+S F+++      PDV  Y+ ++ G+C+   + EA ++F EM    I P+V TY+ 
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS 389

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID LC+ G+I+ A  +  EM + G  PN IT+N+L+    K    +K +++  ++K   
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            +    TYN LI+  CK G+L+DA KV   ++  G N +  T+N + +   K G V
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 169/345 (48%), Gaps = 12/345 (3%)

Query: 94  LSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHE 153
           L+LGF        ++  + R +I   C V      L++L   +    R + V    +Y+ 
Sbjct: 166 LALGFQ-------LNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVV----MYNT 214

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I+   K +  + A+ F   M ++ +  TV T++ L+      G   +A+   ++M    
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             P    FSI++   C++ +  EA++ F   +K   +P+++ Y +L+ G+C    +++AE
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F  M   G+ P+V++YSI+I   C+   +  A  +F EM      P+ +T+N+L+   
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K+ R    L++  +M   G   + ITYN L+D  CK+  ++ AI++L  +      P+ 
Sbjct: 395 CKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSV 454

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            T+N++   + K G +  A +++  +       +  TYN +++ F
Sbjct: 455 CTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGF 499



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 158/363 (43%), Gaps = 38/363 (10%)

Query: 203 VHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVR 260
           V +FN +  +    P  I F  ++  L +    S   S    ++ +    +++  + L+ 
Sbjct: 53  VSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILIN 112

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
            + + G+ S +  VF  +   G +P+  T + +I  LC  G I +A     ++L +G + 
Sbjct: 113 CFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQL 172

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD---------- 370
           N +++  L+    K  +T+  L++  ++       D + YN +ID  CKD          
Sbjct: 173 NQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFY 232

Query: 371 -------------------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
                                    G+L+DAI +L+ M+ +  NP   TF+++     K 
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKE 292

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G V  A  ++  M     +PN VTYN LM  +      +    +   M +  V P+V++Y
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSY 352

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            I+I+ +C +   + A K   EM   K + P    Y  ++  L ++G++    +L+ +M 
Sbjct: 353 SIMISGFCKIKMVDEAMKLFEEM-HCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMH 411

Query: 526 DRG 528
           DRG
Sbjct: 412 DRG 414


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 193/428 (45%), Gaps = 74/428 (17%)

Query: 135 FNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYV 194
           F W   + +F H+    + ++++  K R+ + A  F         E    +++ L+  + 
Sbjct: 89  FQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFF 148

Query: 195 RAGLAAEAVHAFNRMEEYGCA---------------------------------PDKIAF 221
           +AG   +A+  F  M++ G A                                 P+ I++
Sbjct: 149 KAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISY 208

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           +I+I  LC+ R+  +A + F  + DK   PDV+ Y  L+ G  +   + EA  +F E + 
Sbjct: 209 TIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARA 268

Query: 281 AGIQPNVYTYSIVIDALCRCGQIT------------------------------------ 304
            G  P V TY+ +ID LC+CG+I                                     
Sbjct: 269 KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGE 328

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG--CEADTITYNF 362
           +A++++ EML+ GC P+ +T+N L+    K+   +K ++++ +M  +G  C+ + ITY  
Sbjct: 329 KAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMG-VGNVCDPNVITYTV 387

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LID  CK  +L DA+K+   M  +   P+A TF  + + + K   ++ AH ++  +    
Sbjct: 388 LIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGK-T 446

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C+P++V +N ++  +      D   KL   M ++   P + TY  L+T +C  G +++A 
Sbjct: 447 CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDAL 506

Query: 483 KYIREMIE 490
               EMIE
Sbjct: 507 IMYHEMIE 514



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 145/283 (51%), Gaps = 6/283 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+  GK R+   A+   +  +++    TV T++ ++    + G    A+  
Sbjct: 238 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 297

Query: 206 FNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWC 263
           ++ M  E    PD   +S +I+ L    R  +A   ++ + D    PDV+ Y  L+ G C
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLC 357

Query: 264 RAGNISEAERVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           ++G   +A  +FR+M +  +  PNV TY+++ID  C+  ++  A  +  EM      P++
Sbjct: 358 KSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDA 417

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +TF  +++   K SR ++  +++  + +  C+ D++ +N ++  +CK  +++DA K+ + 
Sbjct: 418 VTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDR 476

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           M+  GC P  +T+  +     + G  + A  MY +M ++   P
Sbjct: 477 MLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 131/253 (51%), Gaps = 4/253 (1%)

Query: 151 YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ MI+   K  + + A   + D+++  +++  + T+S L+     +    +A   +  M
Sbjct: 278 YNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM 337

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGN 267
            + GC+PD + ++ ++  LC+     +A   F  +   +  +P+VI YT L+  +C+   
Sbjct: 338 LDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDR 397

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A ++ +EM+   + P+  T++ VI  LC+  +I  AH++F E +   C+P+S+ FN 
Sbjct: 398 LGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNT 456

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++  + K +R +   +++++M   GC     TY  L+   C+ G+  DA+ + + M+  G
Sbjct: 457 MLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMG 516

Query: 388 CNPNASTFNMIFR 400
             P      ++ R
Sbjct: 517 FPPERHLAELVDR 529



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 3/177 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAV 203
           SPD+  Y+ +++   K    D A      M   NV +  V T+++L+ R+ +     +AV
Sbjct: 343 SPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAV 402

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
                ME     PD + F+ VI  LC++ R  EA   F+S+    +PD +++  ++ G+C
Sbjct: 403 KLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYC 462

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
           +   I +A+++   M  +G  P + TY+ ++   CR G+ + A  ++ EM+E+G  P
Sbjct: 463 KITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 178/376 (47%), Gaps = 8/376 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           + +++    K++ +         M S  +   V T +IL+  +        A     ++ 
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 212

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           + GC PD   F+ +I  LC + +  EA   FD ++ + F+PDV+ Y  L+ G C+ GN S
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A R+ R M     +PNV  Y+ +ID+LC+  Q+T A ++F+EM+  G  P+  T+N+L+
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                    + V  + N+M       + + ++ ++D  CK+G +  A  V++ M+++G  
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+  +        +++ A +++  M    C PN  +YNIL+  +   +  D  + L
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            ++M    +  +  TY  LI   C +G   +A     EM+    + P    Y ++L    
Sbjct: 453 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI-PDLVTYRILLD--- 508

Query: 510 RAGQLQKHEELVEKMV 525
               L K+  L E MV
Sbjct: 509 ---YLCKNHHLAEAMV 521



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 182/409 (44%), Gaps = 40/409 (9%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A H  D       +  V T+  L+    + G  + A+     M +  C P+ 
Sbjct: 234 GKIGE---ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNV 290

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           IA++ +I  LC+ R+ +EA + F  +  K   PD+  Y +L+   C          +  E
Sbjct: 291 IAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 350

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M  + I PNV  +S V+DALC+ G I  AHDV   M++ G EP+ +T+  LM  H   S 
Sbjct: 351 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 410

Query: 338 TEKVLQVYNQMKRLGCE-----------------------------------ADTITYNF 362
            ++ ++V++ M   GC                                    ADT+TYN 
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI   C  G+L+ AI + + MV  G  P+  T+ ++   + K   +  A  +   ++   
Sbjct: 471 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 530

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            + + + YNI +     +   +    L   +    ++P+V TY I+I   C  G  + A 
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           K  R+M E  C + G  +Y  +++   R+ +     +L+++M+  GF+A
Sbjct: 591 KLFRKMDENGCSRDG-CIYNTIIRGFLRSNETFGATQLLQEMLAEGFSA 638



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 166/345 (48%), Gaps = 3/345 (0%)

Query: 130 QVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           QV   FN  +       SPD+  Y+ +I+    + ++      ++ M +  +   V  FS
Sbjct: 305 QVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFS 364

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            +V    + G+ A A    + M + G  PD + ++ ++   C +    EA   FD++  K
Sbjct: 365 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 424

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P+V  Y  L+ G+C+   + +A  +  +M + G+  +  TY+ +I  LC  G++  A
Sbjct: 425 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 484

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM+  G  P+ +T+  L+    K     + + +   ++    +AD + YN  ID 
Sbjct: 485 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 544

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+LE A  + +++  KG  P+  T+N++   + K G ++ A++++ KM +  C  +
Sbjct: 545 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRD 604

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              YN +++ F  S  T    +L +EM       +V+T  +++ M
Sbjct: 605 GCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEM 649



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 1/222 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   ++++ D A   ++ M  + +     T++ L+      G    A+  F+ M 
Sbjct: 433 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD + + I++  LC+    +EA     +++    + D++VY   + G CRAG + 
Sbjct: 493 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 552

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +F  +   G+QP+V TY+I+I  LC+ G +  A+ +F +M E GC  +   +N ++
Sbjct: 553 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTII 612

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           R  ++++ T    Q+  +M   G  AD  T   +++    DG
Sbjct: 613 RGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 121/277 (43%), Gaps = 36/277 (12%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           +A   +D+M  R VE  V T++ L+  +       EAV  F+ M   GC P+  +++I+I
Sbjct: 378 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 437

Query: 226 SILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           +  C+ +R  +A    + +       D + Y  L+ G C  G +  A  +F EM  +G  
Sbjct: 438 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 497

Query: 285 PNVYTY-----------------------------------SIVIDALCRCGQITRAHDV 309
           P++ TY                                   +I ID +CR G++  A D+
Sbjct: 498 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 557

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F+ +   G +P+  T+N ++    K    ++  +++ +M   GC  D   YN +I    +
Sbjct: 558 FSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLR 617

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
             +   A ++L  M+ +G + + ST  +I   +S  G
Sbjct: 618 SNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 182/373 (48%), Gaps = 11/373 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y++++N   +  Q D A  F       +      +F+IL+R   R G   +A   FN M
Sbjct: 204 VYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEM 263

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGN 267
             +GC+PD I ++ +I+  CR             L  K+   PDV+ YT+++ G+C+ G 
Sbjct: 264 RGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGK 323

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A  +F  M  +GI+PN +T++I+I+   + G +  A +++ EML +GC P+ ITF +
Sbjct: 324 MEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTS 383

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+  H +  + E+ L++++++       +  T+  L +  CK+ +L +A   L  +  + 
Sbjct: 384 LIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRH 443

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
                  +N +     K G+V+ A+ +  +M++ +C+P+ +TY IL+            +
Sbjct: 444 IVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAI 503

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            +   M      P+  T   LI+     G  N AY+ ++   E+         + + L+ 
Sbjct: 504 SIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASED---------FNLGLKS 554

Query: 508 LRRAGQLQKHEEL 520
           L+R   L+ + ++
Sbjct: 555 LKRNVPLRTNTDI 567



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 178/374 (47%), Gaps = 16/374 (4%)

Query: 146 HSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           HSPD  +   +++ A    +F++A  ++D      VE ++  ++ L+ + VR     EAV
Sbjct: 168 HSPDASVLGFLVSSATDAGKFNIARTWVD-----GVEFSLVVYNKLLNQLVRGNQVDEAV 222

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
             F          D  +F+I+I  LCR  +  +A   F+ ++     PDVI Y  L+ G+
Sbjct: 223 CFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGF 282

Query: 263 CRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           CR   +     + +E+     + P+V TY+ +I   C+ G++ +A  +F  M+  G +PN
Sbjct: 283 CRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPN 342

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           + TFN L+    K         +Y +M  LGC  D IT+  LID HC+ GK+E ++K+ +
Sbjct: 343 AFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWH 402

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE---PNTVTYNILMQMFA 438
            +  +  +PN  TF ++   + K    N  H   G ++DLK          YN ++  F 
Sbjct: 403 ELNARNLSPNEYTFAILTNALCK---ENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFC 459

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
            + + D    +  EMEE   +P+  TY ILI  +C  G  + A      M+   C  P S
Sbjct: 460 KAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGC-APDS 518

Query: 499 SVYEMVLQQLRRAG 512
                ++  L +AG
Sbjct: 519 ITMTSLISCLLKAG 532



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 165 DLAWHFIDLMK-SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           +LA  F  L + + N+  +  T+S L+R     G    A   ++ M   G +PD      
Sbjct: 118 ELALKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGF 177

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           ++S      + + A+++ D +    E  ++VY  L+    R   + EA   FRE      
Sbjct: 178 LVSSATDAGKFNIARTWVDGV----EFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHG 233

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
             +  +++I+I  LCR G++ +A ++F EM   GC P+ IT+N L+    + +  ++   
Sbjct: 234 PFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHD 293

Query: 344 VYNQ-MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +  + + +     D +TY  +I  +CK GK+E A  + N+M+  G  PNA TFN++    
Sbjct: 294 LLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGF 353

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            K+GD+  A  MY +M  L C P+ +T+  L+     +   +  LKL  E+    + PN 
Sbjct: 354 GKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNE 413

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            T+ IL    C     + A  ++R++ + + +     +Y  V+    +AG + +   ++ 
Sbjct: 414 YTFAILTNALCKENRLHEARGFLRDL-KWRHIVAQPFMYNPVIDGFCKAGNVDEANVILA 472

Query: 523 KMVDR 527
           +M ++
Sbjct: 473 EMEEK 477



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 5/205 (2%)

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T++ L+R   +    E    VY+ M   G   D     FL+      GK   A   ++  
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVD-- 196

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              G   +   +N +   + +   V+ A   + +   L    ++ ++NIL++        
Sbjct: 197 ---GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKV 253

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   +L  EM      P+V TY  LI  +C +   +  +  ++E++ +  L P    Y  
Sbjct: 254 DKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTS 313

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++    + G+++K   L   M+  G
Sbjct: 314 IISGYCKLGKMEKASILFNNMISSG 338



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V  P +Y+ +I+   K    D A   +  M+ +  +    T++IL+  +   G  +EA+ 
Sbjct: 445 VAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAIS 504

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
            FNRM   GCAPD I  + +IS L +    +EA        + F
Sbjct: 505 IFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDF 548


>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 490

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 187/356 (52%), Gaps = 11/356 (3%)

Query: 102 STAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           S+   +S   +  V+ K     HG P+ Q L F+ +  AR  F HS      M+ + G+ 
Sbjct: 63  SSGIHLSKDLIDRVL-KRVRFSHGNPI-QTLEFYRYAGARRGFYHSSFSLDTMLYILGRN 120

Query: 162 RQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD--- 217
           R+FD  W  +   K ++   I+  T  +++ R  +     + V +F + +     PD   
Sbjct: 121 RKFDQIWEILIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFD 178

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
              F+ ++  LC+++  ++A++ + SLK +F+PD+  +  L+ GW    +  EAE  F E
Sbjct: 179 TACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEE 235

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           MK  G++P+V TY+ +ID  C+  +I +A+ +  +M E    P+ IT+  ++       +
Sbjct: 236 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQ 295

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            +K  +V  +MK  GC  D   YN  I  +C   +L DA K+++ MV+KG +PNA+T+N+
Sbjct: 296 PDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNL 355

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            FR +S   D+  +  +Y +M    C PNT +   L++MF   +  DM ++L ++M
Sbjct: 356 FFRVLSLANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 411



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 5/208 (2%)

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           ++  FN L+R   +         VY+ +K    + D  T+N L+         E+A    
Sbjct: 178 DTACFNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFNILLSGW---KSSEEAEAFF 233

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M  KG  P+  T+N +     K  ++  A+++  KM++    P+ +TY  ++      
Sbjct: 234 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLI 293

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D   ++ KEM+E    P+V  Y   I  YC      +A K + EM++ K L P ++ 
Sbjct: 294 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVK-KGLSPNATT 352

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y +  + L  A  L +  EL E+M+  G
Sbjct: 353 YNLFFRVLSLANDLGRSWELYERMLGNG 380



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 38/245 (15%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I++  K R+ + A+  ID M+  +    V T++ ++      G   +A   
Sbjct: 243 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKAREV 302

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
              M+EYGC PD  A++  I   C  RR  +A    D + K    P+   Y    R    
Sbjct: 303 LKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSL 362

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR------------------------- 299
           A ++  +  ++  M   G  PN  +   +I    R                         
Sbjct: 363 ANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLV 422

Query: 300 ----------CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
                       ++  A     EM+E G  P++++F  +  +   A++ ++V  +  +M 
Sbjct: 423 SDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMA 482

Query: 350 RLGCE 354
             G E
Sbjct: 483 IFGTE 487


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 200/417 (47%), Gaps = 9/417 (2%)

Query: 119 SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKS 176
           S  VR G P L V S FN +        +PD+  +  +I+        +L +  +  +  
Sbjct: 115 SSSVRDG-PALAV-SMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIK 172

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVH-AFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
             +     TF+ L+R        ++A++    RM E GC PD  +++ ++  LC +++  
Sbjct: 173 TGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCE 232

Query: 236 EAQSFFDSLK---DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           EA      +    D   P+V+ YT ++ G+ + G++ +A  +F +M   GI PNV T + 
Sbjct: 233 EAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNS 292

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VID LC+   + +A  V  +M++    PN  T+N+L+  ++ + +  + +++  +M R G
Sbjct: 293 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 352

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + +TY+ LIDC CK G   +A ++ NSM++ G  PNAST+  +    +  G++   +
Sbjct: 353 QRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMN 412

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            +   M      P    +NI +  +      D       +M++    P++  Y  +I   
Sbjct: 413 NVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           C +G  ++A     +MI++  L P    +  ++      G+ +K EEL  +M+DRG 
Sbjct: 473 CKIGRLDDAMSRFCQMIDDG-LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGI 528



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 197/416 (47%), Gaps = 14/416 (3%)

Query: 127 PLLQVL-------SFFNWVTAR-PEFVHSPDLYHEMINLAGKV--RQFDLAWHFIDLMK- 175
           PLL+ L          N V  R PE   +PD++     L G    ++ + A   I +M  
Sbjct: 184 PLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAE 243

Query: 176 -SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
              N    V +++ ++  + + G   +A   F +M ++G  P+ +  + VI  LC+ +  
Sbjct: 244 DGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAM 303

Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            +A++    + D+   P+   Y +L+ G+  +G  +EA R+ +EM   G +PNV TYS++
Sbjct: 304 DKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSML 363

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID LC+ G    A ++F  M++ G +PN+ T+ +L+  +        +  V + M + G 
Sbjct: 364 IDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM 423

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
                 +N  I  +CK G+L++A    N M ++G  P+   +  +   + K+G ++ A  
Sbjct: 424 RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMS 483

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
            + +M D    P+ +T+N L+  FA     +   +L  EM +  + PNVNT+  +I    
Sbjct: 484 RFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLF 543

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G    A K   +++     KP    Y  ++     AG++ +  +L++ M+  G 
Sbjct: 544 KEGKVTEARKLF-DLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 598



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 175/375 (46%), Gaps = 6/375 (1%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           KV+  D A   +  M   ++     T++ L+  Y+ +G   EAV     M   G  P+ +
Sbjct: 299 KVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVV 358

Query: 220 AFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            +S++I  LC+    +EA+  F+S+ +   +P+   Y +L+ G+   GN+ +   V   M
Sbjct: 359 TYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM 418

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              G++P  + ++I I A C+CG++  A   F +M + G  P+ + +  ++    K  R 
Sbjct: 419 VQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRL 478

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +  +  + QM   G   D IT+N LI      GK E A ++   M+ +G  PN +TFN +
Sbjct: 479 DDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSM 538

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + K G V  A +++  M     +PN V+YN ++  +  +     V+KL  +M    +
Sbjct: 539 IDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 598

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA-GQLQKH 517
           +P   T+  L+     MG   +      + + + C + G    E +L   R   G+  K 
Sbjct: 599 KPTAVTFNTLLDGMVSMGLKPDVVTC--KTLIDSCCEDGR--IEDILTLFREMLGKADKT 654

Query: 518 EELVEKMVDRGFTAR 532
           + + E +  RG T +
Sbjct: 655 DTITENIKLRGVTVK 669



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 15/307 (4%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAER--------VFREMKMAG---IQ 284
           +A   FD L  +  P  I   N +        +S + R        +F  M  AG   + 
Sbjct: 82  DALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVA 141

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ- 343
           P++ T+ I+I   C  G +        ++++ G    ++TF  L+R      RT   +  
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRC 401
           V  +M  LGC  D  +Y  L+   C + K E+A ++++ M   G  C PN  ++  +   
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             K GDV  A+ ++ KM D    PN VT N ++      ++ D    + ++M +  + PN
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             TY  LI  Y   G W  A + ++EM  +   +P    Y M++  L ++G   +  E+ 
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDG-QRPNVVTYSMLIDCLCKSGLHAEAREIF 380

Query: 522 EKMVDRG 528
             M+  G
Sbjct: 381 NSMIQSG 387


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 176/348 (50%), Gaps = 2/348 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M     +    TF+ L+        A+EAV   +RM + GC PD + +  V++
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A +  + ++  K E +V++Y+ ++   C+  +  +A  +F EM+  G++P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TYS +I  LC  G+ + A  + ++M+E    PN +TF+ L+   VK  +  K  ++Y
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M +   + +  TY+ LI+  C   +L +A ++L  M+RK C PN  T+N +     K 
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             V+    ++ +M       NTVTY  L+  F  ++  D    + K+M    V PN+ TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            IL+   C  G    A   + E ++   ++P    Y ++++ + +AG+
Sbjct: 467 NILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 147/278 (52%), Gaps = 1/278 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +I ++ L+    +            +M++ GI  N+YTY+I+I+  CRC +++ A  +
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             +M+++G EP+ +T N+L+      +R    + + +QM  +G + DT+T+  LI     
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             K  +A+ +++ MV++GC P+  T+  +   + K GD + A  +  KM+  K E N V 
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+ ++      +  D  L L  EME   V PNV TY  LI+  C  G W++A + + +MI
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           E K + P    +  ++    + G+L K E+L E+M+ R
Sbjct: 316 ERK-INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 178/379 (46%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           + ++++   K+ +FDL   F + M+   +   + T++IL+  + R    + A+    +M 
Sbjct: 81  FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD +  + +++  C   R S+A +  D + +  ++PD + +T L+ G       S
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +   M   G QP++ TY  V++ LC+ G    A ++  +M     E N + ++ ++
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K    +  L ++ +M+  G   + ITY+ LI C C  G+  DA ++L+ M+ +  N
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  TF+ +     K G +  A ++Y +M     +PN  TY+ L+  F          ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            + M   +  PNV TY  LI  +C     +   +  REM  ++ L   +  Y  ++    
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM-SQRGLVGNTVTYTTLIHGFF 439

Query: 510 RAGQLQKHEELVEKMVDRG 528
           +A      + + ++MV  G
Sbjct: 440 QARDCDNAQMVFKQMVSVG 458



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 2/352 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M     E  + T + L+  +      ++AV   ++M E G  PD + F+ +I  L    +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
           ASEA +  D +  +  +PD++ Y  +V G C+ G+   A  +  +M+ A I+ NV  YS 
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           VID+LC+      A ++F EM   G  PN IT+++L+       R     ++ + M    
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              + +T++ LID   K GKL  A K+   M+++  +PN  T++ +      L  +  A 
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +M   M    C PN VTYN L+  F  +K  D  ++L +EM +  +  N  TY  LI  +
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
                 +NA    ++M+    + P    Y ++L  L + G+L K   + E +
Sbjct: 439 FQARDCDNAQMVFKQMVSVG-VHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 160/325 (49%), Gaps = 2/325 (0%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
           +ME  G + +   ++I+I+  CR  R S A +    + K  +EPD++   +L+ G+C   
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            IS+A  +  +M   G +P+  T++ +I  L    + + A  +   M++ GC+P+ +T+ 
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            ++    K   T+  L + N+M+    EA+ + Y+ +ID  CK    +DA+ +   M  K
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN  T++ +  C+   G  + A R+   M + K  PN VT++ L+  F         
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            KL +EM +  ++PN+ TY  LI  +C +     A + +  MI + CL P    Y  ++ 
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL-PNVVTYNTLIN 401

Query: 507 QLRRAGQLQKHEELVEKMVDRGFTA 531
              +A ++ K  EL  +M  RG   
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVG 426


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 175/337 (51%), Gaps = 2/337 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+ L+        A+EAV   +RM + GC P+ + + +V++ LC++     A +  + +
Sbjct: 116 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 175

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +  K E DV+++  ++   C+  ++ +A  +F+EM+  GI+PNV TYS +I  LC  G+ 
Sbjct: 176 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 235

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A  + ++M+E    PN +TFN L+   VK  +  +  ++++ M +   + D  TYN L
Sbjct: 236 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 295

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  C   +L+ A ++   MV K C P+  T+N + +   K   V     ++ +M     
Sbjct: 296 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 355

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
             +TVTY  L+Q        D   K+ K+M  + V P++ TY IL+   C  G    A +
Sbjct: 356 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 415

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
            + + +++  +K    +Y  +++ + +AG++    +L
Sbjct: 416 -VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 451



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 197/394 (50%), Gaps = 6/394 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVR 191
           F   V +RP  + S   ++++++   K+++FDL  +   +  M     E ++ T S L+ 
Sbjct: 30  FGGMVKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLN 87

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EP 250
            Y      ++AV   ++M E G  PD I F+ +I  L    +ASEA +  D +  +  +P
Sbjct: 88  GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 147

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +++ Y  +V G C+ G+I  A  +  +M+ A I+ +V  ++ +ID+LC+   +  A ++F
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM   G  PN +T+++L+       R     Q+ + M       + +T+N LID   K+
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           GK  +A K+ + M+++  +P+  T+N +         ++ A +M+  M    C P+  TY
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           N L++ F  SK  +   +L +EM    +  +  TY  LI      G  +NA K  ++M+ 
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +  + P    Y ++L  L   G+L+K  E+ + M
Sbjct: 388 DG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 182/375 (48%), Gaps = 2/375 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K    DLA++ ++ M++  +E  V  F+ ++    +     +A++ F  ME
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 211

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ + +S +IS LC   R S+A Q   D ++ K  P+++ +  L+  + + G   
Sbjct: 212 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 271

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE++  +M    I P+++TY+ +I+  C   ++ +A  +F  M+   C P+  T+N L+
Sbjct: 272 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   K+ R E   +++ +M   G   DT+TY  LI     DG  ++A KV   MV  G  
Sbjct: 332 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 391

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T++++   +   G +  A  ++  M+  + + +   Y  +++    +   D    L
Sbjct: 392 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 451

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +    V+PNV TY  +I+  C       AY  +++M E+  L P S  Y  +++   
Sbjct: 452 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHL 510

Query: 510 RAGQLQKHEELVEKM 524
           R G      EL+ +M
Sbjct: 511 RDGDKAASAELIREM 525



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 156/334 (46%), Gaps = 4/334 (1%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF---DSLKDKFEPDVIVYTN 257
           +A+  F  M +    P    F+ ++S + + ++     S       +K  +EP ++  ++
Sbjct: 25  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSS 84

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+ G+C    IS+A  +  +M   G +P+  T++ +I  L    + + A  +   M++ G
Sbjct: 85  LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 144

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
           C+PN +T+  ++    K    +    + N+M+    EAD + +N +ID  CK   ++DA+
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            +   M  KG  PN  T++ +  C+   G  + A ++   M + K  PN VT+N L+  F
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                     KL  +M +  ++P++ TY  LI  +C     + A +    M+ + C  P 
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PD 323

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
              Y  +++   ++ +++   EL  +M  RG   
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 357



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 163/359 (45%), Gaps = 7/359 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I+  C  RH    L +         RP  V     Y  +I+      ++  A   +  M
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVT----YSSLISCLCSYGRWSDASQLLSDM 245

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
             + +   + TF+ L+  +V+ G   EA    + M +    PD   ++ +I+  C   R 
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305

Query: 235 SEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            +A+  F+ +  KD F PD+  Y  L++G+C++  + +   +FREM   G+  +  TY+ 
Sbjct: 306 DKAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I  L   G    A  VF +M+  G  P+ +T++ L+       + EK L+V++ M++  
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + D   Y  +I+  CK GK++D   +  S+  KG  PN  T+N +   +     +  A+
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 484

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            +  KMK+    P++ TYN L++            +L +EM       + +T  ++  M
Sbjct: 485 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 543



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 3/158 (1%)

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG--DVNGAHRMYGKMKDLKCEPN 426
           KD KL+DAI +   MV+    P+   FN +   I+K+   D+  +  + GKM  L  EP+
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VT + L+  +   K     + L  +M E    P+  T+  LI         + A   + 
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            M++  C +P    Y +V+  L + G +     L+ KM
Sbjct: 139 RMVQRGC-QPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 175



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 3/153 (1%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+    I L G     + + A    D M+   +++ +  ++ ++    +AG   +    
Sbjct: 392 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 451

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
           F  +   G  P+ + ++ +IS LC KR   EA +    +K D   PD   Y  L+R   R
Sbjct: 452 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 511

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
            G+ + +  + REM+      +  T  +V + L
Sbjct: 512 DGDKAASAELIREMRSCRFVGDASTIGLVANML 544


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 191/371 (51%), Gaps = 7/371 (1%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE-YGCA-PDKIAFSI 223
            A+  + LM  R   + V   +++++ + R+G   +A+  F++M+  Y C  PD + ++ 
Sbjct: 95  FAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNT 154

Query: 224 VISILCRKRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           +++  C+ +R +EA+  F+++K   +  P+++ Y+ L+  +C++G + E   +  EM+  
Sbjct: 155 LVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G++ +V+ YS +I A C  G I    ++F EML     PN +T++ LM+   +  R  + 
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            ++   M   G   D + Y  L D  CK+G+  DAIKVL+ MV+KG  P   T+N++   
Sbjct: 275 SEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNG 334

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM--EENEVE 459
           + K   ++ A  +   M     +P+ VTYN L++    +      + L K +  E+  V+
Sbjct: 335 LCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVK 394

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           P+V T   LI   C  G  ++A +    M+E   L+     Y  +++    A +L +  +
Sbjct: 395 PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMG-LQGNIVTYNFLIEGYLAARKLIEALK 453

Query: 520 LVEKMVDRGFT 530
           L +  V+ GF+
Sbjct: 454 LWKYAVESGFS 464



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 183/416 (43%), Gaps = 39/416 (9%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+        +      D M  R V   V T+S L++   R G   EA      M
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNI 268
              G  PD +A++++   LC+  RA +A    D +  K E P  + Y  +V G C+   +
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRM 341

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML--EVGCEPNSITFN 326
            +A  V   M   G +P+  TY+ ++  LC  G+I  A D++  +L  +   +P+  T N
Sbjct: 342 DDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCN 401

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           NL++   K  R     ++++ M  +G + + +TYNFLI+ +    KL +A+K+    V  
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G +PN+ T++++   + K+  ++ A  ++ KMKD    P  + YN LM       S +  
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521

Query: 447 LKLKKEMEE-----------------------------------NEVEPNVNTYRILITM 471
             L +EM                                      ++ P+  T+ ILI  
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINR 581

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +  +G  + A     +M+    + PG  V++ +L+     G+ +K   L+ +M D+
Sbjct: 582 FSKLGMLDEAMGLYEKMVSCGHV-PGVVVFDSLLKGYGLKGETEKIISLLHQMADK 636



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 162/328 (49%), Gaps = 3/328 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM- 209
           Y+ ++N   K  + D A+  +++M  +  +    T++ L++    AG   EA+  +  + 
Sbjct: 328 YNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLL 387

Query: 210 -EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGN 267
            E++   PD    + +I  LC++ R  +A     S+ +   + +++ Y  L+ G+  A  
Sbjct: 388 SEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARK 447

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA ++++    +G  PN  TYS++I+ LC+   ++ A  +F +M + G  P  I +N 
Sbjct: 448 LIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNA 507

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           LM    +    E+   ++ +M+ +    D +++N +ID   K G ++ A ++L+ M    
Sbjct: 508 LMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD 567

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+A TF+++    SKLG ++ A  +Y KM      P  V ++ L++ +     T+ ++
Sbjct: 568 LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKII 627

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGM 475
            L  +M + +V  +      ++   C M
Sbjct: 628 SLLHQMADKDVVLDSKLTSTILACLCHM 655



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 155/335 (46%), Gaps = 7/335 (2%)

Query: 200 AEAVHAFNRM--EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYT 256
           ++AV  F+R    +    P + A S +I  L + R+     S +  +      P     +
Sbjct: 22  SDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLS 81

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE- 315
            L   +    + S A  V   M   G   NVY  ++V+   CR GQ  +A  +F++M   
Sbjct: 82  ALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141

Query: 316 VGC-EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADTITYNFLIDCHCKDGKL 373
             C  P+ +T+N L+    KA R  +   ++  MK+ G C  + +TY+ LIDC+CK G++
Sbjct: 142 YDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEV 201

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            + + +L  M R+G   +   ++ +       GD+     ++ +M   K  PN VTY+ L
Sbjct: 202 GEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCL 261

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           MQ    +       ++ K+M    V P+V  Y +L    C  G   +A K +  M+ +K 
Sbjct: 262 MQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMV-QKG 320

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +PG+  Y +V+  L +  ++     +VE MV +G
Sbjct: 321 EEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKG 355



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 6/296 (2%)

Query: 243 SLKDKFEPDVIVYT-NLV-RGWCRAGNISEAERVFREMK--MAGIQPNVYTYSIVIDALC 298
           SL  K    V VY  NLV +G+CR+G   +A  +F +MK     + P+  TY+ +++  C
Sbjct: 101 SLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFC 160

Query: 299 RCGQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           +  ++  A  +F  M + G C PN +T++ L+  + K+    + L +  +M+R G +AD 
Sbjct: 161 KAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADV 220

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
             Y+ LI   C +G +E   ++ + M+R+  +PN  T++ + + + + G    A  M   
Sbjct: 221 FVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKD 280

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M      P+ V Y +L      +      +K+   M +   EP   TY +++   C    
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            ++A+  + EM+ +K  KP +  Y  +L+ L  AG++ +  +L + ++   F  +P
Sbjct: 341 MDDAFGVV-EMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKP 395



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 103/197 (52%), Gaps = 1/197 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S+++    +  + + A   F +M++ G  P  I ++ +++ LCR+    +A+S F  +
Sbjct: 469 TYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           ++     DV+ +  ++ G  +AG++  A+ +  EM M  + P+  T+SI+I+   + G +
Sbjct: 529 RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGML 588

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  ++ +M+  G  P  + F++L++ +     TEK++ + +QM       D+   + +
Sbjct: 589 DEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTI 648

Query: 364 IDCHCKDGKLEDAIKVL 380
           + C C   +  D  K+L
Sbjct: 649 LACLCHMSRNLDVEKIL 665


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 186/381 (48%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ MIN+  K  +   A  FI LM++  ++  V T++ ++  Y   G    A   F+ M+
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMK 253

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD   +   IS +C++ +  EA    + +K+    P  + Y  L+ G+C  GN+ 
Sbjct: 254 CRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLE 313

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A     +M   G+ P V TY+++I AL    ++  A  +  EM E G  P+S+T+N L+
Sbjct: 314 MAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILI 373

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + +    +K   ++++M   G +   +TY  LI    K G+++ A  +   +VRKG  
Sbjct: 374 NGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIF 433

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   FN +       G+++ A  M  +M  +K  P+ VT+N LMQ        +   +L
Sbjct: 434 PDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAREL 493

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +EM+   ++P+  +Y  LI+ Y   G   +A++   EM+      P    Y  ++Q L 
Sbjct: 494 IEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG-FNPTLLTYNALIQGLC 552

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           +  +    E+L+++M+ +G T
Sbjct: 553 KNEEGDHAEQLLKEMISKGIT 573



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 228/504 (45%), Gaps = 25/504 (4%)

Query: 46  SPDTPF-LSPEETLI---SEKFHSLIKDHHRKNPNPSSNSNPSLNP-------------- 87
           SP  P  L+P   L    S ++H +    H+  P+  S +  SL+               
Sbjct: 4   SPSIPTELTPRTILDLIHSSQWHFIKHLAHKITPSLISTALTSLHKTPDLAFQFVTHIGF 63

Query: 88  -DFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVH 146
            D  I S  L  + IS A +  PS        + GV     +   L     V     +V 
Sbjct: 64  GDLDIKSKCLAMAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYV- 122

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
              LY  +I    ++++ D A+   D+MK + V   V   + ++  ++++    +A   +
Sbjct: 123 ---LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
             M         + F+I+I++LC++ +  +A+ F   ++    +P+V+ Y  ++ G+C  
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G +  A  +F  MK  G++P+ YTY   I  +C+ G++  A  +  +M E+G  P ++T+
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+  +      E      ++M R G      TYN LI     D K+++A  ++  M  
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE 359

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  P++ T+N++     + G+V  A  ++ +M     +P  VTY  L+ + +       
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 419

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L +++    + P++  +  LI  +C  G+ + A+  ++EM + K + P    +  ++
Sbjct: 420 ADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVV-PDEVTFNTLM 478

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
           Q   R G+++   EL+E+M  RG 
Sbjct: 479 QGRCREGKVEAARELIEEMKSRGI 502



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 159/325 (48%), Gaps = 3/325 (0%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD Y     ++G  ++  L  A   ++ MK   +  T  T++ L+  Y   G    A   
Sbjct: 259 PDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDY 318

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            ++M   G  P    ++++I  L    +  EA      + +K   PD + Y  L+ G+CR
Sbjct: 319 RDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCR 378

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            GN+ +A  +  EM   GIQP   TY+ +I  L + G++ +A D+F +++  G  P+ I 
Sbjct: 379 CGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIM 438

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+  H      ++   +  +M ++    D +T+N L+   C++GK+E A +++  M 
Sbjct: 439 FNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMK 498

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  P+  ++N +    SK GD+  A R+  +M  +   P  +TYN L+Q    ++  D
Sbjct: 499 SRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGD 558

Query: 445 MVLKLKKEMEENEVEPNVNTYRILI 469
              +L KEM    + PN NTY  LI
Sbjct: 559 HAEQLLKEMISKGITPNDNTYLSLI 583



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 3/153 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  ++ +I+        D A+  +  M    V     TF+ L++   R G    A   
Sbjct: 434 PDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAREL 493

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
              M+  G  PD I+++ +IS   ++    +A    D  L   F P ++ Y  L++G C+
Sbjct: 494 IEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCK 553

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
                 AE++ +EM   GI PN  TY  +I+ +
Sbjct: 554 NEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 175/389 (44%), Gaps = 4/389 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I    KV+  + A+  +  +K  N+         +V      G    A   
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANEL 464

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M  +G  P+ + ++ ++  L ++ R  EA      +KD+   PDV  Y  ++ G+C+
Sbjct: 465 FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCK 524

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG + E +    EM   G++PNVYTY   I   CR G++  A   F EML+ G  PN + 
Sbjct: 525 AGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVI 584

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
             +L+  + K   T K    +  M   G   D  T++ LI    K+GKL++A+ V + ++
Sbjct: 585 CTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL 644

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  P+  T+  +   + K GD+  A  ++  M      PN VTYN L+          
Sbjct: 645 DKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIA 704

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              +L   + E  +  N  TY  +I  YC   +   A++    M +   + P S VY  +
Sbjct: 705 KARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM-KLVGVPPDSFVYCAL 763

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +    +AG  +K   L   MV+ G  + P
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVEEGIASTP 792



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 192/454 (42%), Gaps = 74/454 (16%)

Query: 148 PDLYH--EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y    +IN   +V + +   H +  M+ +     + T+S+++    RAG   EA+  
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW-- 262
              M   G  PD   ++ +I   CR++R++E +S  D +     +PD + YT L+ G+  
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 263 ---------------------------------CRAGNISEAERVFREMKMAGIQPNVYT 289
                                            C+ G++ +AE +F EM M GI+P++ T
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 290 Y-----------------------------------SIVIDALCRCGQITRAHDVFAEML 314
           Y                                     +++ LC CG +TRA+++F EM+
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G +PN + +  +++  VK  R E+ +++   MK  G   D   YN +I   CK GK+E
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           +    L  M+ KG  PN  T+        + G++  A R + +M D    PN V    L+
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
             +    +T       + M +  V P+V T+ +LI      G    A     E++ +K L
Sbjct: 590 DGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL-DKGL 648

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            P    Y  ++  L + G L+   EL + M  +G
Sbjct: 649 VPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 171/356 (48%), Gaps = 3/356 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  + V   V T S+L+    + G   EA+  F+ + + G  PD   ++ +IS LC++  
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A    D + K    P+++ Y  L+ G C+ G I++A  +F  +   G+  N  TYS 
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +I   C+   +T A  +F  M  VG  P+S  +  L+    KA  TEK L ++  M   G
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
             A T  +N LID   K GKL +A +++  MV     PN  T+ ++      +G++  A 
Sbjct: 788 I-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAE 846

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           +++ +M+     PN +TY  L+  +        +  L  EM    ++P+   + +++  +
Sbjct: 847 QLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAH 906

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              G+W  A K + +M+ E  +    ++Y +++  L +   L +  ++++++  +G
Sbjct: 907 LKEGNWIKALKLVDDMLSEG-VNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQG 961



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 182/424 (42%), Gaps = 32/424 (7%)

Query: 133 SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID-LMKSRNVEITV-------- 183
            FFNWV +R  F  +   +  +  +      F  A + ++ ++ +RN  + +        
Sbjct: 92  GFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCY 151

Query: 184 ------------DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI-----S 226
                         F IL+  Y + G   EAV  F      G   ++    +        
Sbjct: 152 KEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVF-----LGAKTNEFIVGLACCNSLSK 206

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            L +  R       +  +     PDV  YTNL+  +CR G + E + V  +M+  G  PN
Sbjct: 207 DLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPN 266

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + TYS+VI  LCR G +  A ++   M   G  P++  +  L+    +  R+ +   + +
Sbjct: 267 LVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLD 326

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M  +G + D + Y  LI+   K   +  A +V   M  +    N  T+  +   + K+G
Sbjct: 327 EMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIG 386

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           D+  A  ++ +M  +  +P+  TYN L++ +   ++ +   +L  E+++  +  N     
Sbjct: 387 DLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCG 446

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            ++   C  G    A +  +EMI    LKP   +Y  +++ L + G+ ++  +++  M D
Sbjct: 447 AIVNGLCHCGDLTRANELFQEMISWG-LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKD 505

Query: 527 RGFT 530
           +G +
Sbjct: 506 QGLS 509



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 145/303 (47%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K+ +   A    D +  + +     T+S ++  Y ++    EA   F+ M+
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK 749

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
             G  PD   +  +I   C+     +A S F  + ++       +  L+ G+ + G + E
Sbjct: 750 LVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIE 809

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A ++  +M    I PN  TY+I+I+  C  G I  A  +F EM +    PN +T+ +L+ 
Sbjct: 810 AYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLH 869

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
            + +  R  ++  ++++M   G + D + ++ ++D H K+G    A+K+++ M+ +G N 
Sbjct: 870 GYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNV 929

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
             + + ++   + K  +++   ++  +++    + +  T   L+  F  +  TD  L++ 
Sbjct: 930 CKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVL 989

Query: 451 KEM 453
           + M
Sbjct: 990 ESM 992



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 158/345 (45%), Gaps = 4/345 (1%)

Query: 148 PDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++     ++   ++ DL  A+   D M  + +   + T++ L+    + G  A+A   
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCR 264
           F+ + E G A + + +S +I+  C+    +EA   F  +K     PD  VY  L+ G C+
Sbjct: 710 FDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCK 769

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AGN  +A  +F  M   GI  +   ++ +ID   + G++  A+ +  +M++    PN +T
Sbjct: 770 AGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVT 828

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  H      ++  Q++ +M++     + +TY  L+  + + G+  +   + + MV
Sbjct: 829 YTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMV 888

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  P+   ++++     K G+   A ++   M           Y IL+       +  
Sbjct: 889 ARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLS 948

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
            VLK+  E+E+   + ++ T   L+  +   G  + A + +  M+
Sbjct: 949 EVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 207/437 (47%), Gaps = 40/437 (9%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           Q+ +    +  +P  +    L + ++    K   +     F D++K   V++  +TF+IL
Sbjct: 160 QIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK-LGVKVNTNTFNIL 218

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           +         +EA+    +M+++ C PD ++++ ++ +LC+K + +EA+     +K+   
Sbjct: 219 IYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGL 278

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P+   +  LV G+C+ G + EA +V   M    + P+V+TY+++I  LC+ G+I  A  
Sbjct: 279 LPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFR 338

Query: 309 VFAEMLEV-----------------------------------GCEPNSITFNNLMRVHV 333
           +  EM  +                                   G +PN++T+N +++ +V
Sbjct: 339 LKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYV 398

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           K  + +       +M+  G   D +T+N LI+ +CK G+L +A ++++ M RKG   N+ 
Sbjct: 399 KEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSV 458

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL-MQMFATSKSTDMVLKLKKE 452
           T N I   +     ++ A+++           + V+Y  L M  F   KS +  +KL  E
Sbjct: 459 TLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVE-AMKLWDE 517

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M+E E+ P++ TY  +I   C  G  + +   + E++E   L P  + Y  ++    R G
Sbjct: 518 MKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESG-LVPDETTYNTIILGYCREG 576

Query: 513 QLQKHEELVEKMVDRGF 529
           Q++K  +   KMV + F
Sbjct: 577 QVEKAFQFHNKMVKKSF 593



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 187/384 (48%), Gaps = 4/384 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I    K  + D A+   D M++  +   V T++ L+        + +    
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFEL 374

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            ++ME  G  P+ + +++V+    ++ +   A +    +++  F PD + +  L+ G+C+
Sbjct: 375 IDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK 434

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG +SEA R+  EM   G++ N  T + ++  LC   ++  A+ + +   + G   + ++
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  + K  ++ + ++++++MK        ITYN +I   C  GK + +I  LN ++
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL 554

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+ +T+N I     + G V  A + + KM     +P+  T NIL++   T    D
Sbjct: 555 ESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLD 614

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             LKL           +  TY  +I+  C    +  A+  + EM EEK L P    Y  +
Sbjct: 615 KALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEM-EEKKLGPDCYTYNAI 673

Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
           L  L  AG++++ EE + ++V++G
Sbjct: 674 LSALADAGRMKEAEEFMSRIVEQG 697



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 168/363 (46%), Gaps = 16/363 (4%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR---K 231
           K +++ + +DT    +  YV       A   FNRM+     P+ +  + +I+ L R   K
Sbjct: 134 KVQSLRVILDTS---IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSK 190

Query: 232 RRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
                +++ F D +K   + +   +  L+ G C    +SEA  +  +MK     P+  +Y
Sbjct: 191 PSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSY 250

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + ++D LC+ G++  A D+  +M   G  PN  TFN L+  + K    ++  QV + M +
Sbjct: 251 NTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQ 310

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI----FRCISKLG 406
                D  TYN LI   CKDGK+++A ++ + M      P+  T+N +    F C S L 
Sbjct: 311 NNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLK 370

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
                 +M GK      +PN VTYN++++ +      D      ++MEE+   P+  T+ 
Sbjct: 371 GFELIDKMEGK----GVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFN 426

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            LI  YC  G  + A++ + EM   K LK  S     +L  L    +L    +L+     
Sbjct: 427 TLINGYCKAGRLSEAFRMMDEM-SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 485

Query: 527 RGF 529
           RG+
Sbjct: 486 RGY 488



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 133/263 (50%), Gaps = 4/263 (1%)

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQ---ITRAHDVFAEMLEVGCEPNSITFNN 327
           A ++F  MK   ++PN+ T + +I+AL R      +  +  +F++++++G + N+ TFN 
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+      ++  + + +  +MK   C  D ++YN ++D  CK GKL +A  +L  M   G
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN +TFN++     KLG +  A ++   M      P+  TYN+L+         D   
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           +LK EME  ++ P+V TY  LI            ++ I +M E K +KP +  Y +V++ 
Sbjct: 338 RLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM-EGKGVKPNAVTYNVVVKW 396

Query: 508 LRRAGQLQKHEELVEKMVDRGFT 530
             + G++      + KM + GF+
Sbjct: 397 YVKEGKMDNAGNELRKMEESGFS 419



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 138/315 (43%), Gaps = 31/315 (9%)

Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
           +S++ +T+ H +   CG R    L       +  + R  FV     Y  +I    K  + 
Sbjct: 456 NSVTLNTILHTL---CGERK---LDDAYKLLSSASKRGYFVDEVS-YGTLIMGYFKDGKS 508

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
             A    D MK + +  ++ T++ ++     +G   +++   N + E G  PD+  ++ +
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTI 568

Query: 225 ISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I   CR+ +  +A  F + + K  F+PD+     L+RG C  G + +A ++F      G 
Sbjct: 569 ILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGK 628

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
             +  TY+ +I  LC+  +   A D+ AEM E    P+  T+N ++     A R ++  +
Sbjct: 629 AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEE 688

Query: 344 VYNQMKRLG-----------------------CEADTITYNFLIDCHCKDGKLEDAIKVL 380
             +++   G                        + +++T++  I+  C  GK +DA+ ++
Sbjct: 689 FMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMV 748

Query: 381 NSMVRKGCNPNASTF 395
               +KG   + ST+
Sbjct: 749 QESTQKGITLHKSTY 763



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 24/200 (12%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q + A+ F + M  ++ +  + T +IL+R     G+  +A+  FN     G A D + ++
Sbjct: 577 QVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYN 636

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE----RVFRE 277
            +IS LC++ R  EA      +++K   PD   Y  ++     AG + EAE    R+  +
Sbjct: 637 TIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQ 696

Query: 278 MKMAG-------------------IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
            K+                       PN  T+S  I+ LC  G+   A  +  E  + G 
Sbjct: 697 GKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGI 756

Query: 319 EPNSITFNNLMRVHVKASRT 338
             +  T+ +LM   +K  ++
Sbjct: 757 TLHKSTYISLMEGLIKRRKS 776


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 180/359 (50%), Gaps = 3/359 (0%)

Query: 173 LMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           +++ R +  + V  ++ L+  Y ++G    A+ A  RM   G   D + ++ +++ LCR 
Sbjct: 190 MVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRA 249

Query: 232 RRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
             A  A+   +++K D  EP+V+ YT  +   CR   + +A  ++ EM   G+ P+V T 
Sbjct: 250 GEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTL 309

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           S ++D LCR G+ + A+ +F EM ++G  PN +T+  L+    KA R  +   +  ++  
Sbjct: 310 SALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVS 369

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G   D + Y  L+D   K GK+++   + +  +     PN  T+ ++   + + G+V+G
Sbjct: 370 RGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDG 429

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A +M  +M+D    PN VT++ ++                ++M+E  ++PNV TY  ++ 
Sbjct: 430 AEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMD 489

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +       +A     EM+ E  ++    + ++++  LR+ G++++ E L   M  RG 
Sbjct: 490 GFFKCQEQESALDLYHEMLCEG-VEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGM 547



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 39/336 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y   I    +    D A+   + M    V   V T S LV    RAG  +EA   F  ME
Sbjct: 274 YTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREME 333

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEA----------------------------QSFFD 242
           + G AP+ + +  +I  L + RR SE+                            Q   D
Sbjct: 334 KIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKID 393

Query: 243 SLKDKFE--------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
            +KD F         P+ + YT L+   CRAGN+  AE++  EM+   + PNV T+S +I
Sbjct: 394 EVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSII 453

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           + L + G + +A D   +M E G +PN +T+  +M    K    E  L +Y++M   G E
Sbjct: 454 NGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVE 513

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            +    + L++   K+GK+E+A  +   M ++G   +   +  +   + K+G++  A ++
Sbjct: 514 VNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKV 573

Query: 415 YGKMKDLKCEPNTVTYNILMQ---MFATSKSTDMVL 447
             ++ +    P+ V YN+ +    M   SK  + +L
Sbjct: 574 GQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 163/384 (42%), Gaps = 37/384 (9%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M+++ V + V  ++ LV    RAG A  A      M+  G  P+ + ++  I+  CR   
Sbjct: 227 MRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNA 286

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A S ++ + +    PDV+  + LV G CRAG  SEA  +FREM+  G  PN  TY  
Sbjct: 287 VDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCT 346

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGC---------------------------------- 318
           +ID+L +  + + +H +  E++  G                                   
Sbjct: 347 LIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDN 406

Query: 319 -EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN +T+  L+    +A   +   Q+  +M+      + +T++ +I+   K G L  A 
Sbjct: 407 HTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAA 466

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
             +  M  +G +PN  T+  +     K  +   A  +Y +M     E N    ++L+   
Sbjct: 467 DYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGL 526

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             +   +    L ++M +  +  +   Y  LI     MG+   A+K  +E+ E   L P 
Sbjct: 527 RKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERN-LSPD 585

Query: 498 SSVYEMVLQQLRRAGQLQKHEELV 521
           + VY + +  L   G+ ++ E ++
Sbjct: 586 AVVYNVFVNCLCMLGKSKEAESIL 609



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 35/286 (12%)

Query: 244 LKDKFEPDVIVYTNLVRGWCRAG-NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           L+     D + Y  ++ G    G +   A  +  EM   G+  +  T +  + ALCR GQ
Sbjct: 120 LRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQ 179

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A    AEM+  G                             ++ RL    D + +N 
Sbjct: 180 VEGAA-ALAEMMVRG----------------------------REIHRL----DVVGWNA 206

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+D +CK G +E A+     M  +G   +   +N +   + + G+ + A  M   MK   
Sbjct: 207 LLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDG 266

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            EPN VTY   +     + + D    L +EM    V P+V T   L+   C  G ++ AY
Sbjct: 267 VEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAY 326

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              REM E+    P    Y  ++  L +A +  +   L+ ++V RG
Sbjct: 327 ALFREM-EKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRG 371


>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 860

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 38/342 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF W+  +P F H    Y  M+   G+ +QF      +D M     +    T++ L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             Y RA    EA++ FN+M+E GC                                  +P
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGC----------------------------------KP 432

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D + Y  L+    +AG +  A  +++ M+  G+ P+ +TYS++I+ L + G +  AH +F
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC--HC 368
            EM++ GC PN +T+N +M +H KA   +  L++Y  M+  G E D +TY+ +++   HC
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G LE+A  V   M +K   P+   + ++     K G+V  A + Y  M      PN  
Sbjct: 553 --GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVP 610

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           T N L+  F          +L + M    + P++ TY +L++
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 139/251 (55%), Gaps = 1/251 (0%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  G + + +TY+ ++  L R  Q    + +  EM+  GC+PN++T+N L+  + +A+  
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
            + + V+NQM+  GC+ D +TY  LID H K G L+ A+ +   M   G +P+  T+++I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G +  AH+++ +M D  C PN VTYNI+M + A +++    LKL ++M+    
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGF 535

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP+  TY I++ +    G+   A     EM ++K   P   VY +++    +AG ++K  
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594

Query: 519 ELVEKMVDRGF 529
           +  + M+  G 
Sbjct: 595 QWYQAMLHAGL 605



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 171/357 (47%), Gaps = 13/357 (3%)

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI--------LCRKRRASEAQ 238
           ++  R+Y  +G   E V +  R   +G A ++   ++ + I        L +      A 
Sbjct: 289 ALTSRQYCNSGYIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL 348

Query: 239 SFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            FF  LK +  F+ D   YT +V    RA       ++  EM   G QPN  TY+ +I +
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
             R   +  A +VF +M E GC+P+ +T+  L+ +H KA   +  + +Y +M+  G   D
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           T TY+ +I+C  K G L  A K+   MV +GC PN  T+N++    +K  +   A ++Y 
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYR 528

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M++   EP+ VTY+I+M++       +    +  EM++    P+   Y +L+ ++   G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +   A+++ + M+    L P       +L    R  ++ +  EL++ M+  G   RP
Sbjct: 589 NVEKAWQWYQAMLHAGLL-PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RP 642


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK    E  V T+++L++   +      A      M   GC P+ ++++ VIS +C    
Sbjct: 171 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGM 230

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             E +     L ++FEP V VY  L+ G C+  +      +  EM   GI PNV +YS +
Sbjct: 231 VKEGRQ----LAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTL 286

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR-LG 352
           I+ L   GQI  A  + A+ML+ GC PN  T ++L++       T   L ++NQM R  G
Sbjct: 287 INELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFG 346

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + + + YN L+   C  G ++ A+ V   M   GC+PN  T+  +    +K G + GA 
Sbjct: 347 LQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAV 406

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++ KM    C PN V Y  +++             L + M +    P+V T+   I   
Sbjct: 407 YIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 466

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  G  + A K  R+M ++    P    Y  +L  L +A ++++   L  ++  RG
Sbjct: 467 CDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 194/417 (46%), Gaps = 15/417 (3%)

Query: 110 STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWH 169
           + ++ + ++SC     +PL   L FF  +     F H+P  +  MI       Q D   +
Sbjct: 44  AVLKRLRQESC-----VPL--ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQY 96

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD-KIAFSIVISIL 228
            +  MK +    + D F  ++  Y + GLA  AV  F R++E+GC P  KI   ++ ++L
Sbjct: 97  LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 156

Query: 229 CRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
              R       + D  +D FEP+V  Y  L++  C+   +  A+++  EM   G  PN  
Sbjct: 157 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAV 216

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           +Y+ VI ++C  G +     + AE      EP    +N L+    K    +  +++ ++M
Sbjct: 217 SYTTVISSMCEVGMVKEGRQL-AERF----EPVVSVYNALINGLCKERDYKGGVELMSEM 271

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              G   + I+Y+ LI+     G++E A  +L  M+++GC+PN  T + + +     G  
Sbjct: 272 VEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTT 331

Query: 409 NGAHRMYGKM-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
             A  M+ +M +    +PN V YN L+Q F +  + D  + +   MEE    PN+ TY  
Sbjct: 332 FDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGS 391

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           LI  +   G    A     +M+   C  P   VY  +++ L R  + ++ E L+E M
Sbjct: 392 LINGFTKRGSLEGAVYIWNKMLTSGCC-PNVVVYTSMVEALCRHSKFKEAESLIEIM 447



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 165/350 (47%), Gaps = 8/350 (2%)

Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
           E  V  ++ L+    +       V   + M E G +P+ I++S +I+ L    +   A S
Sbjct: 242 EPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFS 301

Query: 240 FFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDAL 297
                LK    P++   ++LV+G    G   +A  ++ +M +  G+QPNV  Y+ ++   
Sbjct: 302 LLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGF 361

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C  G I +A  VF  M E+GC PN  T+ +L+    K    E  + ++N+M   GC  + 
Sbjct: 362 CSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNV 421

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           + Y  +++  C+  K ++A  ++  M ++ C P+  TFN   + +   G ++ A +++ +
Sbjct: 422 VVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 481

Query: 418 M-KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           M +  +C PN VTYN L+   A +   +    L +E+    VE + +TY  L+   C  G
Sbjct: 482 MEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAG 541

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
               A + + +M+       G S  E+ +  +  A   Q   E   +M+D
Sbjct: 542 LPGIALQLVGKMMVN-----GKSPDEITMNMIILAYCKQGKAERAVQMLD 586



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +TF  ++R      + + V  +  QMK  G       +  +I  + + G  E A+++   
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +   GC+P+   +N +   +     +   + +Y  MK    EPN  TYN+L++    +  
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D   KL  EM      PN  +Y  +I+  C +G      K  R++ E    +P  SVY 
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVG----MVKEGRQLAER--FEPVVSVYN 249

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            ++  L +    +   EL+ +MV++G +
Sbjct: 250 ALINGLCKERDYKGGVELMSEMVEKGIS 277



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 37/238 (15%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  M+    +  +F  A   I++M   N   +V TF+  ++    AG    A   F +M
Sbjct: 423 VYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482

Query: 210 E-EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           E +Y C P                                  +++ Y  L+ G  +A  I
Sbjct: 483 EQQYRCPP----------------------------------NIVTYNELLDGLAKANRI 508

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  + RE+ M G++ +  TY+ ++   C  G    A  +  +M+  G  P+ IT N +
Sbjct: 509 EEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMI 568

Query: 329 MRVHVKASRTEKVLQVYNQMK--RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  + K  + E+ +Q+ + +   R     D I+Y  +I   C+    ED + +   M+
Sbjct: 569 ILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMI 626



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 3/138 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+E+++   K  + + A+     +  R VE +  T++ L+     AGL   A+    +M 
Sbjct: 495 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMM 554

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL---KDKFEPDVIVYTNLVRGWCRAGN 267
             G +PD+I  +++I   C++ +A  A    D +   + K+ PDVI YTN++ G CR+  
Sbjct: 555 VNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNC 614

Query: 268 ISEAERVFREMKMAGIQP 285
             +   +F  M    I P
Sbjct: 615 REDGVILFERMISERIIP 632


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 197/397 (49%), Gaps = 5/397 (1%)

Query: 136 NWVTARPEFVHSPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRN-VEITVDTFSILVRR 192
           N V A   F   PDL+   +  AG  +  + D A+   D M+  + V   V T++ LV  
Sbjct: 301 NVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDA 360

Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
             +   +++A++    M + G     +  +IV+  LCR+ +  EA      + ++   PD
Sbjct: 361 CFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPD 420

Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
           VI Y  L+  +C+A N+++A  +  EM  +G++ + +T + ++  LC+  +   A ++  
Sbjct: 421 VITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 480

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
              + G  P+ +++  +M  + K ++ E  L ++++M +        TYN LI   C  G
Sbjct: 481 SPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIG 540

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           KL +AI  LN +++KG  P+ +T+N+I     K GD+  A + + KM +   +P+ VT N
Sbjct: 541 KLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCN 600

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            LM         +  +KL +   E   + +V TY  LI   C  G  + A  +  +M E 
Sbjct: 601 TLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADM-EA 659

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + L+P +  Y +VL  L  AG+ ++ + ++ K+ + G
Sbjct: 660 RGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 176/382 (46%), Gaps = 38/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF++LV  +   G  A+A+   + M+ +G +PD + ++ ++   CRK    EA++    +
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271

Query: 245 K-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           K +   P    Y  LV  + R G I +A  V   M   G +P+++TY+++   LC+ G++
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331

Query: 304 TRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
             A  +  EM  +    P+ +T+N L+    K  R+   L +  +M+  G ++  +T+N 
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM---- 418
           ++   C++G+LE+A+  L  M  +G  P+  T+N +     K  +V  A  +  +M    
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 419 ----------------KDLKCE---------------PNTVTYNILMQMFATSKSTDMVL 447
                           K+ + E               P+ V+Y  +M  +      +  L
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L  EM + ++ P++ TY  LI   C +G    A   + E+++ K L P  + Y +++  
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMK-KGLVPDDTTYNIIIHA 570

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
             + G L+K  +   KM++  F
Sbjct: 571 YCKEGDLEKAFQFHNKMLENYF 592



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 152/336 (45%), Gaps = 7/336 (2%)

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF--FDSL-KDKFEPDVIV 254
           LAA+ +H+F R       P   A + V+S L R    S   S   F SL   +  P+   
Sbjct: 155 LAAQLLHSFRRRGH--VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYT 212

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           +  LV   C  G +++A      M+  G+ P+V TY+ ++ A CR G +  A  + A M 
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
           + G  P   T+N L+  + +    ++   V   M   G E D  TYN L    C+ GK++
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 375 DAIKVLNSMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           +A K+ + M      +P+  T+N +     K    + A  +  +M+D   + + VT+NI+
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           ++        +  L   K M E  + P+V TY  LI  YC   +   A+  + EM+    
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG- 451

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           LK  +     +L  L +  + ++ EEL+     RGF
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGF 487



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 129/275 (46%), Gaps = 37/275 (13%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A +  D M  R +  ++ T++ L++     G   EA+   N + + G  PD   ++I+I 
Sbjct: 510 ALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIH 569

Query: 227 ILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C++    +A  F +  L++ F+PDV+    L+ G C  G + +A ++F      G + 
Sbjct: 570 AYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKV 629

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V TY+ +I ALC+ G +  A   FA+M   G +P++ T+N ++    +A R+E+   + 
Sbjct: 630 DVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNML 689

Query: 346 NQMKRLG-----------------------------CEA-------DTITYNFLIDCHCK 369
           +++   G                             CE+       D  +YN  +   C 
Sbjct: 690 HKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCV 749

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            G+L++A  VL+ M++KG + ++ST+  +   + K
Sbjct: 750 GGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 5/185 (2%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L GK+ +   A    +    +  ++ V T++ L++   + G    A+H F  ME  G  P
Sbjct: 608 LHGKLEK---AIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQP 664

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
           D   +++V+S L    R+ EAQ+    L +  +        L++         +   V  
Sbjct: 665 DAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKS 724

Query: 277 EMKMAGIQP--NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           + +  G     +  +Y+  +  LC  GQ+  A  V  EM++ G   +S T+  LM   +K
Sbjct: 725 DCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784

Query: 335 ASRTE 339
             + +
Sbjct: 785 RQKRQ 789


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 181/370 (48%), Gaps = 5/370 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L   MI+  G+  +  +A    +   +     TV  FS L+  Y R+GL  EA+  FN M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQ--SFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
           +EYG  P+ + ++ VI   C K      Q   FFD + ++  +PD I + +L+    R G
Sbjct: 295 KEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
               A  +F EM    I+ +V++Y+ ++DA+C+ GQ+  A ++ A+M      PN ++++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            ++    KA R ++ L ++ +M+ LG   D ++YN L+  + K G+ E+A+ +L  M   
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   +  T+N +     K G  +   +++ +MK     PN +TY+ L+  ++        
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +++ +E +   +  +V  Y  LI   C  G   +A   I EM +E  + P    Y  ++ 
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIID 592

Query: 507 QLRRAGQLQK 516
              R+  + +
Sbjct: 593 AFGRSATMDR 602



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 139/306 (45%), Gaps = 22/306 (7%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++   K  Q DLA+  +  M  + +   V ++S ++  + +AG   EA++ F  M 
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G A D+++++ ++SI  +  R+ EA      +     + DV+ Y  L+ G+ + G   
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E ++VF EMK   + PN+ TYS +ID   + G    A ++F E    G   + + ++ L+
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC------------HCKDGKLEDAI 377
               K       + + ++M + G   + +TYN +ID             +   G L  + 
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSS 616

Query: 378 KVLNSMVRKGCNPNASTFNMIFR---------CISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             L+++     N     F  +           C   + +++    ++ KM  L+ +PN V
Sbjct: 617 SALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVV 676

Query: 429 TYNILM 434
           T++ ++
Sbjct: 677 TFSAIL 682



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 15/285 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++++  KV + + A   +  M S  ++  V T++ L+  Y + G   E    F  M+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
                P+ + +S +I    +     EA   F   K      DV++Y+ L+   C+ G + 
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +  EM   GI PNV TY+ +IDA  R   + R+ D             S+ F++  
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY--------SNGGSLPFSSSA 618

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              +  +   +V+Q++ Q   L  E++  T     DC     +L   ++V   M +    
Sbjct: 619 LSALTETEGNRVIQLFGQ---LTTESNNRTTK---DCEEGMQELSCILEVFRKMHQLEIK 672

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           PN  TF+ I    S+      A  +  +++    +   V + +LM
Sbjct: 673 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLM 717


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 222/486 (45%), Gaps = 57/486 (11%)

Query: 98  FSQISTAHSISPS-TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMIN 156
           F+   +   + PS +V HV++        +P   + +FF +++++P F  + + Y  +  
Sbjct: 67  FTDCPSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLAR 126

Query: 157 LAGKVRQFDLAWHFIDLMKSRN------------VEITVDTF-----SILVRRYVRAGLA 199
                  F  A   I+L+ SR             VE+ V          L+  Y   G  
Sbjct: 127 FLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFI 186

Query: 200 AEAVHAFNRMEEY-------GCAP--DKI--------------------------AFSIV 224
            +A+  F    ++       GC    D++                           F+I+
Sbjct: 187 PDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNIL 246

Query: 225 ISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           ++  C++   S+AQ  FD + K   +P V+ +  L+ G+C+ GN+ E  R+  +M+ +  
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+V+TYS +I+ALC+  ++  AH +F EM + G  PN + F  L+  H +    + + +
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
            Y +M   G + D + YN L++  CK+G L  A  +++ M+R+G  P+  T+  +     
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-QMFATSKSTDMVLKLKKEMEENEVEPNV 462
           + GDV  A  +  +M     E + V ++ L+  M    +  D    L +EM    ++P+ 
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL-REMLRAGIKPDD 485

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY +++  +C  G     +K ++EM  +  + P    Y ++L  L + GQ++  + L++
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLD 544

Query: 523 KMVDRG 528
            M++ G
Sbjct: 545 AMLNIG 550



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 36/305 (11%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D +  R+++ TV +F+ L+  Y + G   E     ++ME+    PD   +S +I+
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318

Query: 227 ILCRKRRASEAQSFFDS------------------------------------LKDKFEP 250
            LC++ +   A   FD                                     L    +P
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D+++Y  LV G+C+ G++  A  +   M   G++P+  TY+ +ID  CR G +  A ++ 
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIR 438

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM + G E + + F+ L+    K  R     +   +M R G + D +TY  ++D  CK 
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKK 498

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G  +   K+L  M   G  P+  T+N++   + KLG +  A  +   M ++   P+ +TY
Sbjct: 499 GDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITY 558

Query: 431 NILMQ 435
           N L++
Sbjct: 559 NTLLE 563



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 115/221 (52%), Gaps = 6/221 (2%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD  LY+ ++N   K      A + +D M  R +     T++ L+  + R G    A+  
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCR 264
              M++ G   D++ FS ++  +C++ R  +A+ +  + L+   +PD + YT ++  +C+
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G+     ++ +EM+  G  P+V TY+++++ LC+ GQ+  A  +   ML +G  P+ IT
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +N L+  H + + + K    Y Q   +G  AD  +Y  +++
Sbjct: 558 YNTLLEGHHRHANSSK---RYIQKPEIGIVADLASYKSIVN 595



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 8/205 (3%)

Query: 171 IDLMK-------SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
           IDLMK       S+ ++  +  ++ LV  + + G    A +  + M   G  PDKI ++ 
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420

Query: 224 VISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I   CR      A      + ++  E D + ++ LV G C+ G + +AER  REM  AG
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           I+P+  TY++++DA C+ G       +  EM   G  P+ +T+N L+    K  + +   
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540

Query: 343 QVYNQMKRLGCEADTITYNFLIDCH 367
            + + M  +G   D ITYN L++ H
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGH 565


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 188/386 (48%), Gaps = 11/386 (2%)

Query: 147 SPDLYHEMINLAGK--VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD Y     L G    +Q++ A   +  M   +      TF+  +R + + GL   AV 
Sbjct: 213 APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 272

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
              +M +YGC PD I +S +++      R  EA    +++  +  P+ + Y   ++G C 
Sbjct: 273 LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR--PNTVCYNAALKGLCI 330

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG   E   +  EM      PN  T+S +I++LC+   +  A +V  +M + G  P+ ++
Sbjct: 331 AGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVS 390

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++      +R +  L++   +K + C+ DTI++N ++ C CK  +  DA++++  M+
Sbjct: 391 YNTIISCFSDQARADDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKML 447

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           +K C  N  TFN++   + + G V  A  ++  M   +C P+ VTY+ L+  F+     +
Sbjct: 448 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDE 507

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
           M   L + M       ++ +Y   +   C    W++A + I +M+ E CL P    + ++
Sbjct: 508 MAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCL-PNEVTFNIL 563

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L + G + +  ++ E+M   G T
Sbjct: 564 ISSLCQKGLVNRAIDVYEQMPKYGIT 589



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
            V + +IL+++       A+A      ++  G A D ++ + +++  CR     +A+   
Sbjct: 115 AVISCNILIKKLCARRRLADAERVLEALKASG-AADAVSHNTLVAGYCRDGSLGDAERVV 173

Query: 242 DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           ++ +     +V+ YT L+ G+CR+G +++A R+   M +A   P+ YTY+ V+  LC   
Sbjct: 174 EAARASGTANVVTYTALIDGYCRSGRLADALRLIASMPVA---PDTYTYNTVLKGLCCAK 230

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           Q  +A ++  EM+   C PN +TF   +R   +    ++ +++  QM + GC  D I Y+
Sbjct: 231 QWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYS 290

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L++   + G++++A+K+LN+M+   C PN   +N   + +   G       +  +M   
Sbjct: 291 TLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRK 347

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
            C PN  T++ L+     ++  +  +++ ++M++    P+V +Y  +I+ +      ++A
Sbjct: 348 DCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDA 407

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            K ++ M+     KP +  +  VL+ L +A +     ELV KM+ +
Sbjct: 408 LKLLKSML----CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKK 449



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 168/364 (46%), Gaps = 12/364 (3%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L   N +  RP  V     Y+  +       +++     I  M  ++      TFS L
Sbjct: 304 EALKLLNTMLCRPNTV----CYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTL 359

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
           +    +  L   AV    +M++YG  PD ++++ +IS    + RA +A     S+  K  
Sbjct: 360 INSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCK-- 417

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           PD I +  +++  C+A    +A  +  +M     + N  T++I+ID+LC+ GQ+  A +V
Sbjct: 418 PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEV 477

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F  M +  C P+ +T+++L+    +    E    ++  M    C AD  +YN  +   C 
Sbjct: 478 FELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCM 534

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             + +DA +++  MV + C PN  TFN++   + + G VN A  +Y +M      P+  T
Sbjct: 535 AARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFT 594

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN L+  ++     D  LK    M     EP+  +Y  ++   C    W +A K + EM+
Sbjct: 595 YNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEML 651

Query: 490 EEKC 493
            + C
Sbjct: 652 RKNC 655



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 152/298 (51%), Gaps = 12/298 (4%)

Query: 143 EFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           ++ + PD+  Y+ +I+      + D A   + L+KS   +    +F+ +++   +A    
Sbjct: 381 KYGYMPDVVSYNTIISCFSDQARADDA---LKLLKSMLCKPDTISFNAVLKCLCKAKRWY 437

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
           +AV    +M +  C  +++ F+I+I  LC+  +  +A   F+ + K +  PD++ Y++L+
Sbjct: 438 DAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLI 497

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+   G    A  +FR M     + ++++Y+  +  LC   +   A ++ A+M+   C 
Sbjct: 498 NGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCL 554

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN +TFN L+    +     + + VY QM + G   D  TYN LI+ + + G+L+DA+K 
Sbjct: 555 PNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKF 614

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           L++M    C P+  ++N I + + +      A ++  +M    C PN VT+    Q+F
Sbjct: 615 LSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLF 669



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 9/196 (4%)

Query: 142 PEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           P++   PD+  Y  +IN   +    ++A+   DL +S      + +++  ++    A   
Sbjct: 482 PKYRCMPDIVTYSSLINGFSEQGLDEMAF---DLFRSMPCRADIFSYNATLKGLCMAARW 538

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNL 258
            +A      M    C P+++ F+I+IS LC+K   + A   ++ + K    PD+  Y  L
Sbjct: 539 DDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNAL 598

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+   G + +A +    M     +P+  +Y+ ++  LCR  +   A  +  EML   C
Sbjct: 599 INGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNC 655

Query: 319 EPNSITFNNLMRVHVK 334
            PN +TF    ++ +K
Sbjct: 656 TPNEVTFKYANQLFIK 671


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 3/371 (0%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT 185
           +++++     ++  PE   +PDL  Y  +I+   K    ++A   +  M S  ++  V  
Sbjct: 236 MVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVC 295

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-L 244
           ++ +++    A    EA      M +  C  D + F+I++   C+           +  L
Sbjct: 296 YNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 355

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           +    PDVI YT ++ G+C+ G + EA  + + M   G +PN  +Y+IV+  LCR  +  
Sbjct: 356 EHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWV 415

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A ++ + M++ GC PN +TFN L+    K    E+ +++  QM   GC  D I+Y+ +I
Sbjct: 416 DAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVI 475

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D   K GK E+A+++LN M+ KG  PN   ++ +   +S+ G  +   +M+  ++D    
Sbjct: 476 DGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR 535

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            +   YN ++        TD  +     M  N   PN +TY ILI      G    A   
Sbjct: 536 SDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDL 595

Query: 485 IREMIEEKCLK 495
           + E+   + ++
Sbjct: 596 LSELCSRRAVR 606



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 179/391 (45%), Gaps = 12/391 (3%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P + H ++  A +   F  A   + ++ ++   +     +++V      G   E V   
Sbjct: 142 TPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELL 201

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-----------PDVIVY 255
            ++  +GC PD ++++ V+  LC  +R  + +     +    E           PD+ +Y
Sbjct: 202 RKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMY 261

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
             ++ G C+ G+   A  +   M   G++PNV  Y+ V+  LC   +   A D+ AEM +
Sbjct: 262 ATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ 321

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
             C  + +TFN L+    +    ++V+++  QM   GC  D ITY  +I+  CK+G +++
Sbjct: 322 EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDE 381

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A+ +L +M   GC PN  ++ ++ + + +      A  +   M    C PN VT+N L+ 
Sbjct: 382 AVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLIN 441

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
                   +  ++L K+M  N   P++ +Y  +I      G    A + +  MI  K + 
Sbjct: 442 FMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI-NKGIT 500

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           P + +Y  +   L R G+  K  ++ + + D
Sbjct: 501 PNTIIYSSMASALSREGRTDKIIQMFDSIQD 531



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 171/375 (45%), Gaps = 12/375 (3%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M  R    T     +++    R G    AV A   +   GC  D    ++V+S
Sbjct: 127 ALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVS 186

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA---- 281
            +C +    E       L     EPD++ Y  +++G C A    + E +  EM       
Sbjct: 187 AICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEAL 246

Query: 282 ------GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
                 G  P++  Y+ +ID +C+ G    A+D+ + M   G +PN + +N +++    A
Sbjct: 247 SQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSA 306

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            R E+   +  +M +  C  D +T+N L+D  C++G ++  I++L  M+  GC P+  T+
Sbjct: 307 ERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITY 366

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             +     K G V+ A  +   M    C+PNT++Y I+++    ++      +L   M +
Sbjct: 367 TTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQ 426

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
               PN  T+  LI   C  G    A + +++M+   C  P    Y  V+  L +AG+ +
Sbjct: 427 QGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTE 485

Query: 516 KHEELVEKMVDRGFT 530
           +  EL+  M+++G T
Sbjct: 486 EALELLNVMINKGIT 500



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 171/394 (43%), Gaps = 51/394 (12%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
            S L+R    AG  A+A  A   ++  G A   +A++ +I+  CR  + + A+    ++ 
Sbjct: 47  LSALIRSLCAAGRTADAARA---LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG---- 301
               P+   Y  +VR  C  G I++A  V  EM + G         ++++A CR G    
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 302 -----QITRAH----------------------DVFAEML----EVGCEPNSITFNNLMR 330
                Q+  A                       D   E+L      GCEP+ +++N +++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 331 VHVKASRTEKVLQVYNQMKRL----------GCEADTITYNFLIDCHCKDGKLEDAIKVL 380
               A R + V ++  +M R+          GC  D   Y  +ID  CKDG  E A  +L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M   G  PN   +N + + +        A  +  +M    C  + VT+NIL+  F  +
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D V++L ++M E+   P+V TY  +I  +C  G  + A   ++ M    C KP +  
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC-KPNTIS 400

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           Y +VL+ L RA +    +EL+  M+ +G    P+
Sbjct: 401 YTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV 434


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 8/348 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T+ +LVR +  AG    A+     ME+  G AP    ++  +  LC+  +  EA     +
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +KD   +PDV+ +  L+ G C+AG + EA++V  EM+ +G   N+ TY+ +I+ L   G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK-RLGCEADTITYN 361
              A  V   M      P++ T+N ++    K+   ++      +MK R GC  DT TY+
Sbjct: 140 SGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 362 FLIDCHCKDGKLEDAIKVLNSMV-RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
            LI+  CK   L  A ++L  M+ RK C  +   FN +     K  D++ A  +   M +
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
             C P+ VTY+ ++         D    L ++M     +P+V TY +L+T  C  G    
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A + ++ M+E+ C  P +  Y +V   L +  +L    +L+  + D+G
Sbjct: 317 ACRLVKRMLEDGC-TPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 157/331 (47%), Gaps = 4/331 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +P    +P +Y+  ++   K  +   A   +  MK    +  V TF+ L+    +AG   
Sbjct: 47  QPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLD 106

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVR 260
           EA    + ME  G A + + ++ +I+ L    R+ EA      +     PD   Y  ++ 
Sbjct: 107 EAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT--PDTQTYNAIIH 164

Query: 261 GWCRAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-EVGC 318
           G+C++G I  A     EMK  AG  P+ +TYSI+I+ LC+   + +A ++  EM+    C
Sbjct: 165 GFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDC 224

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
             + + FN L+  + KA   ++  ++ + M   GC  D +TY+ +ID  C+ G ++    
Sbjct: 225 CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFA 284

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           +L  MV +GC P+  T+ ++   + K G +  A R+  +M +  C PN VTY+++     
Sbjct: 285 LLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC 344

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                DM   L   + +     +V  +  L+
Sbjct: 345 KIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 13/284 (4%)

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           D   Y  LVR  C AG +  A  + REM +  G+ P    Y+  + ALC+ G++  A +V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M +  C+P+ +TFN L+    KA R ++  QV ++M+R G  A+ +TYN LI+    
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK----CEP 425
            G+  +A+ V+  M      P+  T+N I     K G+++   R YG ++++K    C P
Sbjct: 137 AGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEID---RAYGFLEEMKQRAGCSP 190

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           +T TY+IL+     S +     +L +EM    +   +V  +  L+  YC     + A + 
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  M+E  C  P    Y  ++  L R G + K   L+EKMV RG
Sbjct: 251 LSSMLEHGC-APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG 293



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 149/304 (49%), Gaps = 11/304 (3%)

Query: 234 ASEAQSFFDSLKD-----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           A E Q+  D L++        P   +Y   V   C++G + EA  V + MK    +P+V 
Sbjct: 31  AGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVV 90

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T++ +I  LC+ G++  A  V  EM   G   N +T+N L+     A R+ + + V   M
Sbjct: 91  TFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---M 147

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGD 407
           + +    DT TYN +I   CK G+++ A   L  M  R GC+P+  T++++   + K  +
Sbjct: 148 QGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207

Query: 408 VNGAHRMYGKMKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +  A  +  +M   K C  + V +N L+  +  ++  D   +L   M E+   P+V TY 
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C  G  +  +  + +M+   C KP    Y +++  L +AG++ +   LV++M++
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGC-KPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 527 RGFT 530
            G T
Sbjct: 327 DGCT 330



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 37/294 (12%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV-- 203
           PD+  ++ +I    K  + D A   +D M+       + T++ L+     AG + EAV  
Sbjct: 87  PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV 146

Query: 204 ---------------------------HAFNRMEEY----GCAPDKIAFSIVISILCRKR 232
                                       A+  +EE     GC+PD   +SI+I+ LC+  
Sbjct: 147 MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206

Query: 233 RASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
              +A      +  + +    V+ +  LV G+C+A ++  A  +   M   G  P+V TY
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           S +ID LCRCG + +   +  +M+  GC+P+ +T+  L+    KA +  +  ++  +M  
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            GC  + +TY+ + D  CK  KL+ A  +L S+  KG   +   F  +   + K
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKK 380



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEEN-EVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           TY +L++    +      + L +EME+   + P  + Y   +   C  G    A + ++ 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           M +  C KP    +  ++  L +AG+L + ++++++M   GF A
Sbjct: 80  MKDGAC-KPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAA 122


>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
          Length = 586

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 195/440 (44%), Gaps = 12/440 (2%)

Query: 88  DFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHS 147
           DF  P   L  +    A  ++P     V+ +    RH +PL   L FF +    P F H 
Sbjct: 74  DFRGPRHDLPAALRGFAPWLTPGDAAAVLRR---CRH-LPL-PSLRFFLFAGELPGFSHH 128

Query: 148 PDLYHEMINLAGKVRQFDLAWHFI-DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           PD    + N     R F L    + DL  S    ++   F +L R Y RA L  +A+ AF
Sbjct: 129 PDSLLVLANSLAGARLFPLLRSLLSDLPPS---ALSRGLFPLLFRAYSRARLPEDAIRAF 185

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
           + M  +G  P    F  ++  L R       + FF     +F+     YT L+ GW    
Sbjct: 186 SSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESSAQFDVSAKAYTILISGWAVVK 245

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITF 325
               A  +F EM   G++ +V+ Y+ +IDALCR G IT A +  + M +  G  PN+ T+
Sbjct: 246 KPENARSLFDEMVERGVELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVPNAATY 305

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
              +     +      L+V ++M       +  TYN +I   C  G++ +A  +L+ +  
Sbjct: 306 GPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNILDEITT 365

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +G  P+  ++N +     KL +VN A R+  +M    C P+  +YN+L++M       D 
Sbjct: 366 QGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLIGVGRFDT 425

Query: 446 VLKLKKEMEENEVEPNVNTYRILI-TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
            +++   ME+    P   TY ++I  +    G   +A  Y   M++E  + P  +  E++
Sbjct: 426 AIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEG-IPPYQATCEVL 484

Query: 505 LQQLRRAGQLQKHEELVEKM 524
             +L   G   +   L ++M
Sbjct: 485 RDRLLMLGLRDQLGVLTDRM 504



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 9/280 (3%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE- 312
           ++  L R + RA    +A R F  M   G  P +  +  ++ AL R G +      F E 
Sbjct: 164 LFPLLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRES 223

Query: 313 --MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
               +V  +  +I  +    V     + E    ++++M   G E D   YN LID  C+ 
Sbjct: 224 SAQFDVSAKAYTILISGWAVV----KKPENARSLFDEMVERGVELDVHVYNALIDALCRG 279

Query: 371 GKLEDAIKVLNSMVRK-GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           G +  A + L++M +  G  PNA+T+           DV  A R+  +M      PN  T
Sbjct: 280 GDITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFT 339

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN ++++       +    +  E+     +P+V +Y  L+  +C +   N A + I  M 
Sbjct: 340 YNAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMD 399

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +E C  P    Y M+L+ L   G+     E+ + M  RGF
Sbjct: 400 KELC-PPDRHSYNMLLKMLIGVGRFDTAIEVWDGMEKRGF 438


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 195/402 (48%), Gaps = 3/402 (0%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           ++  L  F+ +T R  F     LY  +IN   K RQ   A      M S        T+ 
Sbjct: 25  VMDALELFDKMT-RSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYG 83

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           +++    + GLA + +  F  M   G  P+ I +S +I+ LCR  +  EA + FD +  +
Sbjct: 84  LVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQ 143

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             + +VI Y +L+   CR G   EA R F +M   GI P+V T++ +ID L + G++  A
Sbjct: 144 GIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEA 203

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + +F  M++ G  PN +T+N+L+       + +  ++++  M   G + D I+YN LI+ 
Sbjct: 204 YKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLING 263

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           +C  GK E+A+ +   M  +   P+ +T+ ++ + + + G +  A  ++  M+     P+
Sbjct: 264 YCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPS 323

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TY +L+     +   +  + + + ++  + +P++  Y ILI        W +A +   
Sbjct: 324 LDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFD 383

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           E I    L P    Y +++  L + G+L + E L  +M + G
Sbjct: 384 E-IPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG 424



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 167/334 (50%), Gaps = 4/334 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T S LV+     G   +A+  F++M   G   D + +  +I+ L + R+A  A      +
Sbjct: 11  TVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRM 70

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +    +   Y  ++   C+ G   +  ++FREM   GI PNV  YS +I+ LCR G++
Sbjct: 71  LSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKL 130

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A ++F EM+  G + N IT+N+L+    +    ++  + ++QM   G   D +T+  L
Sbjct: 131 REAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTL 190

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID   K GK+++A K+   M+++G  PN  T+N +   +     ++ A R++  M +   
Sbjct: 191 IDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI 250

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           + + ++YN L+  + TS  T+  + L ++M+  E+ P++ TY IL+      G    A +
Sbjct: 251 KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKE 310

Query: 484 YIREMIEEKCLK-PGSSVYEMVLQQLRRAGQLQK 516
               M  + C + P    Y ++L  L + G +++
Sbjct: 311 LFNNM--QICGQSPSLDTYTVLLDGLCKNGCIEE 342



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 176/388 (45%), Gaps = 37/388 (9%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +IN   +V +   A +  D M S+ ++  V T++ L+    R GL  EA   F++M
Sbjct: 116 VYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQM 175

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP------------------- 250
              G  PD + F+ +I  L +K +  EA   F+ +  + E                    
Sbjct: 176 VGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQM 235

Query: 251 -----------------DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
                            DVI Y  L+ G+C +G   EA  +FR+M+   + P++ TY+I+
Sbjct: 236 DHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTIL 295

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           + AL + G+I  A ++F  M   G  P+  T+  L+    K    E+ + V+  +K +  
Sbjct: 296 LKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKY 355

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           +     Y+ LI    +  + E A+++ + +   G  PN  T+N++   + K G +  A R
Sbjct: 356 KPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAER 415

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++ +M++  CE + +++N +++ F         ++  K M E    PN +   +L+ +Y 
Sbjct: 416 LFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYA 475

Query: 474 GMGHWNNA-YKYIREMIEEKCLKPGSSV 500
                +     ++ E++++K LK    V
Sbjct: 476 ADAQSSELPNNFLHELVQKKTLKTQQDV 503



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 36/316 (11%)

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +K  ++P+++  + LV+G C  G + +A  +F +M  +G Q ++  Y  +I+AL +  Q 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            RA ++   ML   C  N  T+  ++    K     K L+++ +M  +G   + I Y+ L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC---------------------- 401
           I+  C+ GKL +A+ + + MV +G   N  T+N +                         
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 402 -------------ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
                        +SK G V  A++++  M      PN VTYN L+         D  ++
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L + M E  ++ +V +Y  LI  YC  G    A    R+M  E+ L P  + Y ++L+ L
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE-LTPSITTYTILLKAL 299

Query: 509 RRAGQLQKHEELVEKM 524
            + G+++  +EL   M
Sbjct: 300 YQNGRIRTAKELFNNM 315



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 1/148 (0%)

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           ++ G  PN  T + + + +   G V  A  ++ KM     + + + Y  L+     ++  
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              ++L + M       N  TY ++I   C  G      K  REMI    + P   VY  
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG-ICPNVIVYSS 119

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           ++  L R G+L++   L ++MV +G  A
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKA 147


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 8/348 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           T+ +LVR +  AG    A+     ME+  G AP    ++  +  LC+  +  EA     +
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +KD   +PDV+ +  L+ G C+AG + EA++V  EM+ +G   N+ TY+ +I+ L   G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK-RLGCEADTITYN 361
              A  V   M      P++ T+N ++    K+   ++      +MK R GC  DT TY+
Sbjct: 140 SGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 362 FLIDCHCKDGKLEDAIKVLNSMV-RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
            LI+  CK   L  A ++L  M+ RK C  +   FN +     K  D++ A  +   M +
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
             C P+ VTY+ ++         D    L ++M     +P+V TY +L+T  C  G    
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A + ++ M+E+ C  P +  Y +V   L +  +L    +L+  + D+G
Sbjct: 317 ACRLVKRMLEDGC-TPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 157/331 (47%), Gaps = 4/331 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +P    +P +Y+  ++   K  +   A   +  MK    +  V TF+ L+    +AG   
Sbjct: 47  QPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLD 106

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVR 260
           EA    + ME  G A + + ++ +I+ L    R+ EA      +     PD   Y  ++ 
Sbjct: 107 EAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT--PDTQTYNAIIH 164

Query: 261 GWCRAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-EVGC 318
           G+C++G I  A     EMK  AG  P+ +TYSI+I+ LC+   + +A ++  EM+    C
Sbjct: 165 GFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDC 224

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
             + + FN L+  + KA   ++  ++ + M   GC  D +TY+ +ID  C+ G ++    
Sbjct: 225 CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFA 284

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           +L  MV +GC P+  T+ ++   + K G +  A R+  +M +  C PN VTY+++     
Sbjct: 285 LLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC 344

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                DM   L   + +     +V  +  L+
Sbjct: 345 KIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 13/284 (4%)

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           D   Y  LVR  C AG +  A  + REM +  G+ P    Y+  + ALC+ G++  A +V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M +  C+P+ +TFN L+    KA R ++  QV ++M+R G  A+ +TYN LI+    
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK----CEP 425
            G+  +A+ V+  M      P+  T+N I     K G+++   R YG ++++K    C P
Sbjct: 137 AGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEID---RAYGFLEEMKQRAGCSP 190

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           +T TY+IL+     S +     +L +EM    +   +V  +  L+  YC     + A + 
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  M+E  C  P    Y  ++  L R G + K   L+EKMV RG
Sbjct: 251 LSSMLEHGC-APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG 293



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 149/304 (49%), Gaps = 11/304 (3%)

Query: 234 ASEAQSFFDSLKD-----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           A E Q+  D L++        P   +Y   V   C++G + EA  V + MK    +P+V 
Sbjct: 31  AGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVV 90

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T++ +I  LC+ G++  A  V  EM   G   N +T+N L+     A R+ + + V   M
Sbjct: 91  TFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---M 147

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM-VRKGCNPNASTFNMIFRCISKLGD 407
           + +    DT TYN +I   CK G+++ A   L  M  R GC+P+  T++++   + K  +
Sbjct: 148 QGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207

Query: 408 VNGAHRMYGKMKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           +  A  +  +M   K C  + V +N L+  +  ++  D   +L   M E+   P+V TY 
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I   C  G  +  +  + +M+   C KP    Y +++  L +AG++ +   LV++M++
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGC-KPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 527 RGFT 530
            G T
Sbjct: 327 DGCT 330



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 37/294 (12%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV-- 203
           PD+  ++ +I    K  + D A   +D M+       + T++ L+     AG + EAV  
Sbjct: 87  PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV 146

Query: 204 ---------------------------HAFNRMEEY----GCAPDKIAFSIVISILCRKR 232
                                       A+  +EE     GC+PD   +SI+I+ LC+  
Sbjct: 147 MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206

Query: 233 RASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
              +A      +  + +    V+ +  LV G+C+A ++  A  +   M   G  P+V TY
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           S +ID LCRCG + +   +  +M+  GC+P+ +T+  L+    KA +  +  ++  +M  
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            GC  + +TY+ + D  CK  KL+ A  +L S+  KG   +   F  +   + K
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKK 380



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEEN-EVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           TY +L++    +      + L +EME+   + P  + Y   +   C  G    A + ++ 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           M +  C KP    +  ++  L +AG+L + ++++++M   GF A
Sbjct: 80  MKDGAC-KPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAA 122


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 168/332 (50%), Gaps = 4/332 (1%)

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTN 257
            +EAV    RM   GC P++  +  +++ +C+    + A      ++  K +P V+ YT 
Sbjct: 211 VSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTI 270

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           ++   C+ G + +A   F EM+  GI+ NV+TY+ +I + C  G+      +  +M+   
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN +TF+ L+   VK  +  +   +YN+M   G E +TITYN LI   C D +L++A 
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           ++++ MV KGC+P+  T+N++     K   V+   R++ KM       +TVTY+ L+Q F
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGF 450

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKP 496
             S+   +  K+ +EM    V P + TY IL+   C  G    A   + +M   KC ++ 
Sbjct: 451 CQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM--HKCKMEL 508

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +Y +++  +  A ++     L   +  +G
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKG 540



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 182/379 (48%), Gaps = 2/379 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +  L  + +Q+DL       M+ + +   + T +I++  + R      A  A  ++ 
Sbjct: 93  FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF 152

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+ + F+ +++ LC + R  EA    D +   +  PD+I    +V G C    +S
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVS 212

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +   M   G QPN +TY  +++ +C+ G    A D+  +M     +P+ +T+  ++
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R +  L  +++M+  G +A+  TYN LI   C  G+ +D  ++L  M+ +   
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  TF+ +   + K G +  A  +Y +M     EPNT+TYN L+      K  D   ++
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M     +P++ TY ILI  +C     ++  +  R+M   + +   +  Y  ++Q   
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM-SLRGMIADTVTYSTLIQGFC 451

Query: 510 RAGQLQKHEELVEKMVDRG 528
           ++ +L   +++ ++MV +G
Sbjct: 452 QSRKLIVAKKVFQEMVSQG 470



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 177/383 (46%), Gaps = 37/383 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+  ++ R  ++G  A A+    +ME     P  + ++I+I  LC+  R  +A SFF  +
Sbjct: 232 TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + K  + +V  Y +L+  +C  G   +  ++ R+M    I PNV T+S +ID+L + G++
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE--------- 354
           T A D++ EM+  G EPN+IT+N+L+       R ++  Q+ + M   GC+         
Sbjct: 352 TEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNIL 411

Query: 355 --------------------------ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                                     ADT+TY+ LI   C+  KL  A KV   MV +G 
Sbjct: 412 INGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGV 471

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +P   T+ ++   +   G++  A  +  +M   K E +   YNI++     +   D    
Sbjct: 472 HPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWS 531

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L   +    V+ ++ +Y I+++  C     + A    R+M E+   +P    Y  +++  
Sbjct: 532 LFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG-YEPDGCTYNTLIRAH 590

Query: 509 RRAGQLQKHEELVEKMVDRGFTA 531
            R   +    +L+E+M   GF++
Sbjct: 591 LRGNDITTSVQLIEEMKRCGFSS 613



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 155/322 (48%), Gaps = 1/322 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I       ++D     +  M +R +   V TFS L+   V+ G   EA   +N M 
Sbjct: 303 YNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMI 362

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P+ I ++ +I  LC  +R  EA    D +  K  +PD+  Y  L+ G+C+A  + 
Sbjct: 363 TRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVD 422

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +  R+FR+M + G+  +  TYS +I   C+  ++  A  VF EM+  G  P  +T+  L+
Sbjct: 423 DGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILL 482

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                    E+ L + +QM +   E D   YN +I   C   K++DA  +  S+  KG  
Sbjct: 483 DGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVK 542

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +  ++N++   + K   ++ A  ++ KMK+   EP+  TYN L++           ++L
Sbjct: 543 RDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQL 602

Query: 450 KKEMEENEVEPNVNTYRILITM 471
            +EM+      + +T +I++ M
Sbjct: 603 IEEMKRCGFSSDASTVKIVMDM 624



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)

Query: 233 RASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           +  +A + F S L+ +  P VI +  L     R         + ++M++ GI  ++YT +
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           I+I+  CR  ++  A     ++ ++G EPN++TFN L+       R  + +++ + M   
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
               D IT N +++  C   ++ +A+ ++  M+  GC PN  T+  I   + K G+   A
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  KM+  K +P+ VTY I++         D  L    EME   ++ NV TY  LI  
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +C  G W++  + +R+MI  K + P    +  ++  L + G+L + ++L  +M+ RG
Sbjct: 310 FCSFGRWDDGAQLLRDMITRK-ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 181/382 (47%), Gaps = 38/382 (9%)

Query: 185  TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            T+S L+  + + G    A+   N M+E G  P    ++++I++  +   A  A S F+ +
Sbjct: 1222 TYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEM 1281

Query: 245  KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            + ++  PDV  YT L+RG  +AG I EA   F EM+  G +P+    + +I+ L + G++
Sbjct: 1282 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRL 1341

Query: 304  TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTITYNF 362
              A  +F EM  + C P+ +T+N +++   ++ SR  +V   + +MK  G    + TY+ 
Sbjct: 1342 DDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 1401

Query: 363  LIDCHCKDGKLEDAIKVLNSMVRKGCNP-------------------------------- 390
            LID  CK  ++E A+ +L  M  KG  P                                
Sbjct: 1402 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 1461

Query: 391  ---NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
               +A  + ++ + + K G ++ A  M+ +M  L C P+   YN LM   A +   D  L
Sbjct: 1462 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 1521

Query: 448  KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
               + M+E+   P++N+Y I++      G  + A + +  M ++  ++P    Y  VL  
Sbjct: 1522 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM-KQSTVRPDVVSYNTVLGA 1580

Query: 508  LRRAGQLQKHEELVEKMVDRGF 529
            L  AG  ++  +L+++M   GF
Sbjct: 1581 LSHAGMFEEASKLMKEMNTLGF 1602



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 17/420 (4%)

Query: 112  VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
            VR V++   GV         + FF W   R  + H    Y  +I+    V Q+   W  I
Sbjct: 1083 VREVMKTDVGVN------VKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMI 1136

Query: 172  DLMKSRNVEITVDT-FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
              M    + +   T  S +VR    A +  +A+  F +++   C P   A++ +I +L  
Sbjct: 1137 QEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMH 1196

Query: 231  KRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
            + +  +    ++ +  +    PD + Y+ L+  +C+ G    A ++  EMK  G+QP   
Sbjct: 1197 EGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTK 1256

Query: 289  TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
             Y+++I    +      A  +F EM    C P+  T+  L+R   KA R ++    + +M
Sbjct: 1257 IYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEM 1316

Query: 349  KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI----SK 404
            +R GC  DT+  N +I+   K G+L+DA+K+   M    C P+  T+N I + +    S+
Sbjct: 1317 QREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSR 1376

Query: 405  LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
              +V      + +MK+    P++ TY+IL+  F  +   +  + L +EM+E    P    
Sbjct: 1377 ASEVPS---WFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 1433

Query: 465  YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            Y  LI        ++ A +  +E+ +E C    + VY ++++ L +AG+L     + ++M
Sbjct: 1434 YCSLIDALGKAKRYDLACELFQEL-KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM 1492



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 188/395 (47%), Gaps = 8/395 (2%)

Query: 98   FSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI 155
            ++++ST     P TV +  +I   C +      +Q+L+    +  +P    +  +Y  +I
Sbjct: 1207 YNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQP----TTKIYTMLI 1262

Query: 156  NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
             L  K      A    + M+ +     V T++ L+R   +AG   EA H F  M+  GC 
Sbjct: 1263 ALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCR 1322

Query: 216  PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA-GNISEAER 273
            PD +  + +I+ L +  R  +A   F  ++  +  P V+ Y  +++    +    SE   
Sbjct: 1323 PDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPS 1382

Query: 274  VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
             F  MK +GI P+ +TYSI+ID  C+  ++ +A  +  EM E G  P    + +L+    
Sbjct: 1383 WFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 1442

Query: 334  KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
            KA R +   +++ ++K     +    Y  +I    K G+L+DAI + + M + GC P+  
Sbjct: 1443 KAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVY 1502

Query: 394  TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
             +N +   +++ G ++ A     +M++  C P+  +YNI++   A +      +++   M
Sbjct: 1503 AYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM 1562

Query: 454  EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            +++ V P+V +Y  ++      G +  A K ++EM
Sbjct: 1563 KQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 1597



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 160/335 (47%), Gaps = 6/335 (1%)

Query: 148  PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
            PD+  Y E+I   GK  + D A+HF   M+           + ++    +AG   +A+  
Sbjct: 1288 PDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKL 1347

Query: 206  FNRMEEYGCAPDKIAFSIVISILCR-KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F  ME   C P  + ++ +I  L   K RASE  S+F+ +K+    P    Y+ L+ G+C
Sbjct: 1348 FQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFC 1407

Query: 264  RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +   + +A  +  EM   G  P    Y  +IDAL +  +   A ++F E+ E  C  +S 
Sbjct: 1408 KTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE-NCGSSSA 1466

Query: 324  TFNNLMRVHV-KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
                +M  H+ KA R +  + ++++M +LGC  D   YN L+    + G L++A+  +  
Sbjct: 1467 RVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRR 1526

Query: 383  MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
            M   GC P+ +++N+I   ++K G  + A  M   MK     P+ V+YN ++   + +  
Sbjct: 1527 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 1586

Query: 443  TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
             +   KL KEM     E ++ TY  ++     + H
Sbjct: 1587 FEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 1621


>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 185/382 (48%), Gaps = 5/382 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+ + G+  Q  +A    D++   +  + V  ++ ++  Y R G    A+  F RM E G
Sbjct: 193 MVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESG 252

Query: 214 CAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
            +P  + +++++ +  +  R+  +     D ++ +  + D    + ++    R G I EA
Sbjct: 253 LSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEA 312

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
              F  +K  G +P   TY+ ++    + G  + A  V +EM E  C P+++T+N ++  
Sbjct: 313 REFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAA 372

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +V+A   E+   V + M   G   + +TY  +I+ + + G ++ A+++ + M+  GC PN
Sbjct: 373 YVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPN 432

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
            +T+N +   + K        ++ G MK   C PN +T+N ++ M         V ++ +
Sbjct: 433 VATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFR 492

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM+    EP+ +T+  LI+ Y   G  N+A K   EMI+     P  + Y  +L  L R 
Sbjct: 493 EMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAG-FSPCINTYNALLNALARR 551

Query: 512 GQLQKHEELVEKMVDRGFTARP 533
           G  +  E ++  M ++GF  RP
Sbjct: 552 GDWKAAESVILDMRNKGF--RP 571



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 175/369 (47%), Gaps = 10/369 (2%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTAR----PEFVHSPDLYHEMINLAGKV 161
            +SPS V + +      + G    ++L   + + +R     EF  S      +++  G+ 
Sbjct: 252 GLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCST-----VLSACGRE 306

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
              D A  F   +KS   +    T++ L+  + +AG+ +EA+   + MEE  C PD + +
Sbjct: 307 GLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTY 366

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + V++   R     E     D++  K   P+ + YT ++  + R G+I +A  +F +M  
Sbjct: 367 NEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMME 426

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  PNV TY+ V+  L +         +   M   GC PN IT+N ++ +  K    + 
Sbjct: 427 LGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKY 486

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           V QV+ +MK  G E D  T+N LI  + + G   DA K+   M++ G +P  +T+N +  
Sbjct: 487 VNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLN 546

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            +++ GD   A  +   M++    P+  +Y++++  +A   +   +  ++K + + ++ P
Sbjct: 547 ALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFP 606

Query: 461 NVNTYRILI 469
           +    R L+
Sbjct: 607 SWMLLRTLV 615



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 163/354 (46%), Gaps = 44/354 (12%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D+ A  +++ IL R+ + + A   FD +  D +  DV  YT ++  + R G    A  +F
Sbjct: 186 DRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIF 245

Query: 276 REMKMAGIQPNVYTYSIVID------------------------------------ALCR 299
             M  +G+ P++ TY++++D                                    A  R
Sbjct: 246 ERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGR 305

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G I  A + F+ +   G +P ++T+N L+ V  KA    + L V ++M+   C  D +T
Sbjct: 306 EGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVT 365

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           YN ++  + + G  E+   V+++M  KG  PNA T+  I     ++GD++ A  M+ +M 
Sbjct: 366 YNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMM 425

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +L C PN  TYN ++ M      ++ ++K+   M+ N   PN  T+  ++ M CG     
Sbjct: 426 ELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAM-CGK---K 481

Query: 480 NAYKYIREMIEE--KC-LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +KY+ ++  E   C  +P    +  ++    R G      ++ E+M+  GF+
Sbjct: 482 GMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFS 535



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/412 (20%), Positives = 169/412 (41%), Gaps = 37/412 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +IN  G+V   D A    D M        V T++ ++    +  L+ E +     M+
Sbjct: 401 YTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMK 460

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             GC+P+ I ++ ++++  +K         F  +K+  FEPD   +  L+  + R G+ +
Sbjct: 461 LNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNN 520

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A ++  EM  AG  P + TY+ +++AL R G    A  V  +M   G  P+  +++ ++
Sbjct: 521 DAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMV 580

Query: 330 RVHVKASRTEKVLQV-----------------------------------YNQMKRLGCE 354
             + K    + +  +                                   +  +++ G +
Sbjct: 581 HSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYK 640

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D +  N ++    K+   + A ++L  +   G  P+  T N +    ++ GD   A  +
Sbjct: 641 PDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEV 700

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
              ++    +P+ V+YN +++ F         +++  EM    V P + TY   I+ Y  
Sbjct: 701 LRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAA 760

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            G +      I  MI   C +P    Y++V     +A +  +  + V K+ D
Sbjct: 761 QGMFTEINDVISYMIVHNC-RPNELTYKIVADGYCKARRYDEAIDFVSKIKD 811



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/272 (18%), Positives = 122/272 (44%), Gaps = 1/272 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N   +   +  A   I  M+++    +  ++S++V  Y + G           + 
Sbjct: 541 YNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIY 600

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           +    P  +    ++    + R  +  +  F +L K  ++PD+++  +++  + +     
Sbjct: 601 DGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYD 660

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  + R +  AG+QP++ T++ ++D   R G   +A +V   +   G +P+ +++N ++
Sbjct: 661 RAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVI 720

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
           +   +    ++ +++ ++M  +G      TYN  I  +   G   +   V++ M+   C 
Sbjct: 721 KGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCR 780

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           PN  T+ ++     K    + A     K+KD+
Sbjct: 781 PNELTYKIVADGYCKARRYDEAIDFVSKIKDV 812



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 36/206 (17%)

Query: 146 HSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + PDL   + M+++  K   +D A   + L+    ++  + T + L+  Y R G   +A 
Sbjct: 639 YKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAE 698

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWC 263
                ++  G  PD ++++ VI                                  +G+C
Sbjct: 699 EVLRMLQTSGGKPDLVSYNTVI----------------------------------KGFC 724

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R G + E  R+  EM   G+ P ++TY+  I      G  T  +DV + M+   C PN +
Sbjct: 725 RKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNEL 784

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMK 349
           T+  +   + KA R ++ +   +++K
Sbjct: 785 TYKIVADGYCKARRYDEAIDFVSKIK 810


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 175/383 (45%), Gaps = 36/383 (9%)

Query: 137 WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA 196
           WV  + + + +    + +++   K  +FD  W     M +R     V T+  L+    R 
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
           G   +A   F+ M E    P  + ++I+I  LC + R SEA+S F ++++    P++  Y
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
             ++ G+C+  ++ +A  +++EM   G+ PNV T+ I+ID LC+  ++  A     +M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ---------------------------- 347
            G  PN   +N L+  + KA    + L ++++                            
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386

Query: 348 -------MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
                  MK+ G   + +TYN LID +CK+G +E AI+V + M  KG  PN  TF+ +  
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
              K G +  A  +Y +M      P+ V Y  L+       +T    +L KEM+E  + P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 461 NVNTYRILITMYCGMGHWNNAYK 483
           NV T   LI   C  G  ++A K
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIK 529



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 201/454 (44%), Gaps = 55/454 (12%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF--------DLAWHFIDLMKSR---- 177
           Q L  F+ V+ R +   +P LY  +I++    + +        DL     +  +SR    
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111

Query: 178 --NV-------EITVDTFSILVRRYVRAGLAAEAVHAFNRME------------------ 210
             NV       + T + F +L+  +   GL  EA+  + +M+                  
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK 171

Query: 211 --------------EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVY 255
                           G +P+ + +  +I   CR+    +A   FD + + K  P V++Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
           T L+RG C    ISEAE +FR M+ +G+ PN+YTY+ ++D  C+   + +A +++ EML 
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLG 291

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G  PN +TF  L+    K        +    M   G   +   YN LID +CK G L +
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A+ + + + +    P+  T++++ + +  +  +  A  +  +MK     PN VTYN L+ 
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            +    + +  +++  +M E  +EPN+ T+  LI  YC  G    A     EM+  K L 
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV-IKGLL 470

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           P    Y  ++    + G  ++   L ++M + G 
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 1/266 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ M++   K+     A      M    +   V TF IL+    +      A      M 
Sbjct: 266 YNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA 325

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            +G  P+   ++ +I   C+    SEA S    + K +  PDV  Y+ L++G C    + 
Sbjct: 326 SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRME 385

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ + +EMK  G  PN  TY+ +ID  C+ G + +A +V ++M E G EPN ITF+ L+
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + KA + E  + +Y +M   G   D + Y  LID H KDG  ++A ++   M   G +
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMY 415
           PN  T + +   + K G ++ A +++
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 62/331 (18%), Positives = 133/331 (40%), Gaps = 64/331 (19%)

Query: 182 TVDTFSILVRR---YVRAGLA-AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           ++D+FS++       +++ L   + +HA   +  +G  P     + +IS+       ++A
Sbjct: 628 SIDSFSLMFALKACTLKSSLVEGKQMHAL--VINFGFEPIIFLQTSLISMYSATGNVADA 685

Query: 238 QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
            + FD +  K   ++I +T+++  +      ++A ++FR+M+M  +QP++ T ++ + A 
Sbjct: 686 HNMFDEIPSK---NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSAC 742

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
              G +                                        ++  ++  G + D 
Sbjct: 743 ADLGALDMGE-----------------------------------WIHAYIRHRGLDTDL 767

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
              N LI+ + K G++  A +   S+V     PN  TF  +    S  G V    + +  
Sbjct: 768 CLNNSLINMYSKCGEIGTARRF--SLVL----PNDVTFMGVLMACSHAGLVEEGKQHFRS 821

Query: 418 MK-DLKCEPNTVTYNILMQMFA----TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           MK D    P    +  ++ +       +++ + +LK+        V PN   +R L+   
Sbjct: 822 MKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM-------PVRPNAVVWRTLLGAC 874

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              G W+     +R  I+++   PG S  E+
Sbjct: 875 SLQGMWDKKM-LVRNQIKQR-RDPGCSSIEV 903


>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 206/429 (48%), Gaps = 10/429 (2%)

Query: 106 SISP--STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKV 161
           S+SP  +T   +I  +  +R       ++    W+  R  F   PD+  Y+ +I+  G+ 
Sbjct: 162 SLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSF--HPDVICYNLLIDAYGQK 219

Query: 162 RQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
             +  A   +++L+++R V  T DT+++L++ Y  +GL  +A   F  M +YG  P  + 
Sbjct: 220 SLYKKAESTYLELLEARCVP-TEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVV 278

Query: 221 FSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++  I  L +     +A   F+ +K D+ +P    YT L+  + +A     A +VF EM+
Sbjct: 279 YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMR 338

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
               +PN+ T++ +++A  R G   +A ++F ++ E G EP+   +N LM  + +A    
Sbjct: 339 SQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPY 398

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
              ++++ M+ +GCE D  +YN ++D + + G  EDA  V   M R G  P   +  ++ 
Sbjct: 399 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLL 458

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
              S+ G V     +  +M     +P+T   N ++ ++      + + ++   ME+    
Sbjct: 459 SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYP 518

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            +++TY ILI +Y   G +    +  R +   + L P    +   +    R  Q  +  E
Sbjct: 519 ADISTYNILINIYGRAGFFARMEELFRSL-PARNLIPDVVTWTSRIGAYSRRKQYNRCLE 577

Query: 520 LVEKMVDRG 528
           + E+M+D G
Sbjct: 578 VFEEMIDAG 586



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 146/311 (46%), Gaps = 1/311 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S   Y  +INL GK  +  +A      M+S+  +  + TF+ LV  + R GL  +A   F
Sbjct: 310 STATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIF 369

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
            +++E G  PD  A++ ++    R      A   F  ++    EPD   Y  +V  + RA
Sbjct: 370 EQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 429

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G   +A+ VF  MK  GI P + ++ +++ A  R G++ +  ++  +M + G +P++   
Sbjct: 430 GLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVL 489

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+++ ++ +  + EK+ +V   M++    AD  TYN LI+ + + G      ++  S+  
Sbjct: 490 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 549

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +   P+  T+       S+    N    ++ +M D  C P+  T  +L+   +       
Sbjct: 550 RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQE 609

Query: 446 VLKLKKEMEEN 456
           V  + + M ++
Sbjct: 610 VTTVIRTMHKD 620



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 411 AHRMYGKMKDLKCEPNTVTY----NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           ++R++G +  L   PN  T+    N+ +Q+    +   +VL     +  +   P+V  Y 
Sbjct: 153 SNRIWGSLDSL--SPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 210

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +LI  Y     +  A     E++E +C+ P    Y ++L+    +G L+K E +  +M  
Sbjct: 211 LLIDAYGQKSLYKKAESTYLELLEARCV-PTEDTYALLLKAYCTSGLLEKAEAVFAEMRK 269

Query: 527 RGF 529
            GF
Sbjct: 270 YGF 272


>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 569

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 190/400 (47%), Gaps = 4/400 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA-WHFIDLMKSRNVEITVDTFSIL 189
           +L    W+  R  F     +++ +I+  G+   + +A   + +L+++R +  T DT+++L
Sbjct: 131 ILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIP-TEDTYALL 189

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKF 248
           ++ Y  +GL  +A   F  M +YG  P  I ++  I  L +      A   F  +K D  
Sbjct: 190 LKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCC 249

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +P    YT L+    +A     A ++F EM+    +PN+ TY+ +++A  R G   +A +
Sbjct: 250 QPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEE 309

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F ++ E G EP+   +N LM  + +A       ++++ M+ +GCE D  +YN ++D + 
Sbjct: 310 IFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 369

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           + G  EDA  V   M R G  P   +  ++    SK GDV     +  ++ +   EP+T 
Sbjct: 370 RGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTF 429

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             N ++ ++        + ++   ME      +++TY ILI +Y   G +    + + + 
Sbjct: 430 VLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKM-EGLFQS 488

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  K LKP    +   L    R     K  E+ E+M+D G
Sbjct: 489 LAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAG 528


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 199/447 (44%), Gaps = 66/447 (14%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP+ Y   + +AG     +F+ A    D M  +       +F ILVR Y RAGL+  A+ 
Sbjct: 148 SPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALE 207

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
             + M  +G  P+K+ ++ +IS  CR+ R  EA+   + ++ D   PDV+ + + +   C
Sbjct: 208 LLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALC 267

Query: 264 RAGNISEAERVFREMKM---AGI-QPNVYTYSIVIDALC--------------------- 298
            AG I EA R+FR+M++    G+ +PN+ T++++++  C                     
Sbjct: 268 SAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNL 327

Query: 299 --------------RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                         R G++  A     EM++ G EPN  +FN +M    K         +
Sbjct: 328 MELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMI 387

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
              M   G   DT+TY+ L+   C  GK+  A  +L+ M+R+GC+PN  T N++   + K
Sbjct: 388 MGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWK 447

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM----------- 453
            G +  A ++  KM +   + + VT NI++     S   D  +++ + M           
Sbjct: 448 EGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNL 507

Query: 454 ------------EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                          +  P++ TY I+I   C  G  + A K   EM+  K L P S +Y
Sbjct: 508 GNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMV-GKSLHPDSIIY 566

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  +    + G++     +++ M  RG
Sbjct: 567 DTFIHSFCKHGKISSAFRVLKDMEKRG 593



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/462 (22%), Positives = 186/462 (40%), Gaps = 98/462 (21%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   ++ MK     + +++++I +   VR G   EA  A   M + G  P+  +F+ V+ 
Sbjct: 314 AKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMD 373

Query: 227 ILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC+    S+A+      +     PD + Y+ L+ G C  G + +A  +  EM   G  P
Sbjct: 374 GLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSP 433

Query: 286 NVYTYSI-----------------------------------VIDALCRCGQITRAHDVF 310
           N YT +I                                   VID LC+ G++  A ++ 
Sbjct: 434 NTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIV 493

Query: 311 AEMLEVG-----------------------CEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             M   G                       C P+ IT++ ++    KA R ++  + + +
Sbjct: 494 EGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIE 553

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M       D+I Y+  I   CK GK+  A +VL  M ++GCN +  T+N +   I  LG 
Sbjct: 554 MVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSL---ILGLGS 610

Query: 408 VNGAHRMYGKMKDLK---CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            N    +YG + D+K     PN  TYN ++              L  EM +  + PN+++
Sbjct: 611 KNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISS 670

Query: 465 YRILITMYCGM-----------------GHWNNAYKYI-------------REMIE---E 491
           +R+LI  +C                   GH    Y  +             +E+ +   +
Sbjct: 671 FRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALD 730

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +C   G+  Y  ++++L +   L+   +++ KM+D+G+   P
Sbjct: 731 RCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDP 772



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 172/409 (42%), Gaps = 30/409 (7%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P+ V    L H   +  GKV +   A + +  M  R       T +IL+    + G   E
Sbjct: 398 PDTVTYSTLLHGCCS-TGKVLK---ANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFE 453

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL----------------- 244
           A     +M E     D +  +IVI  LC+  +  EA    + +                 
Sbjct: 454 AEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIG 513

Query: 245 -------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
                    K  PD+I Y+ ++ G C+AG + EA + F EM    + P+   Y   I + 
Sbjct: 514 LVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSF 573

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
           C+ G+I+ A  V  +M + GC  +  T+N+L+      ++  ++  + + MK  G   + 
Sbjct: 574 CKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNI 633

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
            TYN +I C C+ G+++DA  +L+ M++KG +PN S+F ++ +   K  D      ++  
Sbjct: 634 CTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEI 693

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
              + C      Y+++              +L     +   +     Y  LI   C    
Sbjct: 694 ALSI-CGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEM 752

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
             NA   + +MI +K  +   + +  V+  L + G+    +EL E+M+D
Sbjct: 753 LENASDILHKMI-DKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMD 800



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 160/349 (45%), Gaps = 8/349 (2%)

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           I+    +RA + ++  H    + +       ++   +I IL +   +  A S F S + +
Sbjct: 49  IITHILIRAKMISQIDHLQQLLLQQPQEVSHVSLIALIRILAKSGLSDLAFSQFQSFRSQ 108

Query: 248 FE---PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
                P V +Y  ++    R   +     ++++M +AG+ P  YT +++I  LC  G+  
Sbjct: 109 VPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFE 168

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A +VF +M   GC PN  +F  L+R + +A  + + L++ + M   G + + + YN LI
Sbjct: 169 DAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLI 228

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK---DL 421
              C++G+ E+A +++  M   G  P+  TFN     +   G +  A R++  M+   +L
Sbjct: 229 SSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEEL 288

Query: 422 KC-EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
               PN  T+N++++ F      +    L + M+ N     + +Y I +      G    
Sbjct: 289 GLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLE 348

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A   ++EM+ +K ++P    +  V+  L + G +     ++  M+  G 
Sbjct: 349 AQLALKEMV-DKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGI 396



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 73/291 (25%)

Query: 214 CAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           C PD I +SI+I+ LC+  R  EA + F + +     PD I+Y   +  +C+ G IS A 
Sbjct: 524 CLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAF 583

Query: 273 RVFREM-----------------------------------KMAGIQPNVYTYSIVIDAL 297
           RV ++M                                   K  GI PN+ TY+ +I  L
Sbjct: 584 RVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCL 643

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY------------ 345
           C  G+I  A  +  EML+ G  PN  +F  L++   KAS    V +V+            
Sbjct: 644 CEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEA 703

Query: 346 ---------------NQMKRLGCEA-------DTITYNFLIDCHCKDGKLEDAIKVLNSM 383
                          ++ K L   A           YN LI+  CKD  LE+A  +L+ M
Sbjct: 704 LYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKM 763

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE---PNTVTYN 431
           + KG   + ++F  +   + K G  + A  +  +M D+  E    N +T N
Sbjct: 764 IDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRN 814


>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Vitis vinifera]
          Length = 587

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 206/429 (48%), Gaps = 10/429 (2%)

Query: 106 SISP--STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKV 161
           S+SP  +T   +I  +  +R       ++    W+  R  F   PD+  Y+ +I+  G+ 
Sbjct: 124 SLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSF--HPDVICYNLLIDAYGQK 181

Query: 162 RQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
             +  A   +++L+++R V  T DT+++L++ Y  +GL  +A   F  M +YG  P  + 
Sbjct: 182 SLYKKAESTYLELLEARCVP-TEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVV 240

Query: 221 FSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++  I  L +     +A   F+ +K D+ +P    YT L+  + +A     A +VF EM+
Sbjct: 241 YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMR 300

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
               +PN+ T++ +++A  R G   +A ++F ++ E G EP+   +N LM  + +A    
Sbjct: 301 SQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPY 360

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
              ++++ M+ +GCE D  +YN ++D + + G  EDA  V   M R G  P   +  ++ 
Sbjct: 361 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLL 420

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
              S+ G V     +  +M     +P+T   N ++ ++      + + ++   ME+    
Sbjct: 421 SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYP 480

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            +++TY ILI +Y   G +    +  R +   + L P    +   +    R  Q  +  E
Sbjct: 481 ADISTYNILINIYGRAGFFARMEELFRSL-PARNLIPDVVTWTSRIGAYSRRKQYNRCLE 539

Query: 520 LVEKMVDRG 528
           + E+M+D G
Sbjct: 540 VFEEMIDAG 548



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 146/311 (46%), Gaps = 1/311 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S   Y  +INL GK  +  +A      M+S+  +  + TF+ LV  + R GL  +A   F
Sbjct: 272 STATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIF 331

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
            +++E G  PD  A++ ++    R      A   F  ++    EPD   Y  +V  + RA
Sbjct: 332 EQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 391

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G   +A+ VF  MK  GI P + ++ +++ A  R G++ +  ++  +M + G +P++   
Sbjct: 392 GLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVL 451

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+++ ++ +  + EK+ +V   M++    AD  TYN LI+ + + G      ++  S+  
Sbjct: 452 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 511

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           +   P+  T+       S+    N    ++ +M D  C P+  T  +L+   +       
Sbjct: 512 RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQE 571

Query: 446 VLKLKKEMEEN 456
           V  + + M ++
Sbjct: 572 VTTVIRTMHKD 582



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 411 AHRMYGKMKDLKCEPNTVTY----NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
           ++R++G +  L   PN  T+    N+ +Q+    +   +VL     +  +   P+V  Y 
Sbjct: 115 SNRIWGSLDSL--SPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYN 172

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           +LI  Y     +  A     E++E +C+ P    Y ++L+    +G L+K E +  +M  
Sbjct: 173 LLIDAYGQKSLYKKAESTYLELLEARCV-PTEDTYALLLKAYCTSGLLEKAEAVFAEMRK 231

Query: 527 RGF 529
            GF
Sbjct: 232 YGF 234


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 188/386 (48%), Gaps = 11/386 (2%)

Query: 147 SPDLYHEMINLAGK--VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD Y     L G    +Q++ A   +  M   +      TF+  +R + + GL   AV 
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
              +M +YGC PD I +S +++      R  EA    +++  +  P+ + Y   ++G C 
Sbjct: 64  LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR--PNTVCYNAALKGLCI 121

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG   E   +  EM      PN  T+S +I++LC+   +  A +V  +M + G  P+ ++
Sbjct: 122 AGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVS 181

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++      +R +  L++   +K + C+ DTI++N ++ C CK  +  DA++++  M+
Sbjct: 182 YNTIISCFSDQARADDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKML 238

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           +K C  N  TFN++   + + G V  A  ++  M   +C P+ VTY+ L+  F+     +
Sbjct: 239 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDE 298

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
           M   L + M       ++ +Y   +   C    W++A + I +M+ E CL P    + ++
Sbjct: 299 MAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCL-PNEVTFNIL 354

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L + G + +  ++ E+M   G T
Sbjct: 355 ISSLCQKGLVNRAIDVYEQMPKYGIT 380



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 8/309 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TFS L+    +  L   AV    +M++YG  PD ++++ +IS    + RA +A     S+
Sbjct: 146 TFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM 205

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
             K  PD I +  +++  C+A    +A  +  +M     + N  T++I+ID+LC+ GQ+ 
Sbjct: 206 LCK--PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVK 263

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A +VF  M +  C P+ +T+++L+    +    E    ++  M    C AD  +YN  +
Sbjct: 264 DAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATL 320

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
              C   + +DA +++  MV + C PN  TFN++   + + G VN A  +Y +M      
Sbjct: 321 KGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGIT 380

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+  TYN L+  ++     D  LK    M     EP+  +Y  ++   C    W +A K 
Sbjct: 381 PDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKL 437

Query: 485 IREMIEEKC 493
           + EM+ + C
Sbjct: 438 VTEMLRKNC 446



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 152/298 (51%), Gaps = 12/298 (4%)

Query: 143 EFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           ++ + PD+  Y+ +I+      + D A   + L+KS   +    +F+ +++   +A    
Sbjct: 172 KYGYMPDVVSYNTIISCFSDQARADDA---LKLLKSMLCKPDTISFNAVLKCLCKAKRWY 228

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLV 259
           +AV    +M +  C  +++ F+I+I  LC+  +  +A   F+ + K +  PD++ Y++L+
Sbjct: 229 DAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLI 288

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G+   G    A  +FR M     + ++++Y+  +  LC   +   A ++ A+M+   C 
Sbjct: 289 NGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCL 345

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN +TFN L+    +     + + VY QM + G   D  TYN LI+ + + G+L+DA+K 
Sbjct: 346 PNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKF 405

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           L++M    C P+  ++N I + + +      A ++  +M    C PN VT+    Q+F
Sbjct: 406 LSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLF 460



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 125/245 (51%), Gaps = 7/245 (2%)

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           + P+ YTY+ V+  LC   Q  +A ++  EM+   C PN +TF   +R   +    ++ +
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           ++  QM + GC  D I Y+ L++   + G++++A+K+LN+M+   C PN   +N   + +
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGL 119

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
              G       +  +M    C PN  T++ L+     ++  +  +++ ++M++    P+V
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            +Y  +I+ +      ++A K ++ M+     KP +  +  VL+ L +A +     ELV 
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML----CKPDTISFNAVLKCLCKAKRWYDAVELVA 235

Query: 523 KMVDR 527
           KM+ +
Sbjct: 236 KMLKK 240



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 9/196 (4%)

Query: 142 PEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           P++   PD+  Y  +IN   +    ++A+   DL +S      + +++  ++    A   
Sbjct: 273 PKYRCMPDIVTYSSLINGFSEQGLDEMAF---DLFRSMPCRADIFSYNATLKGLCMAARW 329

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNL 258
            +A      M    C P+++ F+I+IS LC+K   + A   ++ + K    PD+  Y  L
Sbjct: 330 DDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNAL 389

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+   G + +A +    M     +P+  +Y+ ++  LCR  +   A  +  EML   C
Sbjct: 390 INGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNC 446

Query: 319 EPNSITFNNLMRVHVK 334
            PN +TF    ++ +K
Sbjct: 447 TPNEVTFKYANQLFIK 462


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 184/373 (49%), Gaps = 5/373 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V +   A +F D + ++  ++   ++  L+    R G    AV    R++     P
Sbjct: 140 LKGEVHK---ALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRP 196

Query: 217 DKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + +S +I  +C+ +  ++A   + + +  +  PDV+ Y++L+ G+C  G +  A  +F
Sbjct: 197 NVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLF 256

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M    I PNVYT+SI+ID  C+ G++  A +V A M++   + + +T+N+LM  +   
Sbjct: 257 NRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLV 316

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            +  K   ++N M + G   D  +Y+ +I+  CK   +++A+K+   M  K   PN  T+
Sbjct: 317 KQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTY 376

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + K G  + A  +  +M D     N +TYN ++     +   D  + L  +++E
Sbjct: 377 NSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKE 436

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
             ++P++ TY +LI   C +G  ++A K   +++  K   P    Y  ++      G   
Sbjct: 437 KGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL-VKGYSPNIYTYTSLINGFCNKGFFD 495

Query: 516 KHEELVEKMVDRG 528
           +   ++ KM D G
Sbjct: 496 EGLAMLSKMKDNG 508



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 186/381 (48%), Gaps = 5/381 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I   C V      +Q+L   +    RP  V    +Y  +I+   K +  + A+     M
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVV----MYSTIIDSMCKDKLVNDAFDLYCEM 224

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
            S+ +   V T+S L+  +   G    AV  FNRM      P+   FSI+I   C++ + 
Sbjct: 225 VSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKV 284

Query: 235 SEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA++    + K   + DV+ Y +L+ G+C    +++A+ +F  M   G+ P+V++YSI+
Sbjct: 285 REAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIM 344

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I+  C+   +  A  +F EM      PN +T+N+L+    K+ RT   L++ ++M   G 
Sbjct: 345 INGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQ 404

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
            ++ ITYN ++D  CK+  ++ AI +L  +  KG  P+  T+ ++   + K+G ++ A +
Sbjct: 405 PSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQK 464

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  +      PN  TY  L+  F      D  L +  +M++N   PN  TY ILI    
Sbjct: 465 VFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLF 524

Query: 474 GMGHWNNAYKYIREMIEEKCL 494
                + A K +REMI    L
Sbjct: 525 EKDENDKAEKLLREMIARGLL 545



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 187/406 (46%), Gaps = 35/406 (8%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K +Q+  A      M+   ++    T ++L+  + + G    +   F ++ + G  PD +
Sbjct: 70  KAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAV 129

Query: 220 AFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            F+I+I  LC K    +A  F D  +   F+ D + Y  L+ G CR G    A ++ R +
Sbjct: 130 TFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRV 189

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
               ++PNV  YS +ID++C+   +  A D++ EM+     P+ +T+++L+       + 
Sbjct: 190 DGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKL 249

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +  + ++N+M       +  T++ LID  CK+GK+ +A  VL  M++K    +  T+N +
Sbjct: 250 KYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSL 309

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                 +  VN A  ++  M      P+  +Y+I++  F   K  D  +KL +EM   ++
Sbjct: 310 MDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQI 369

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREM------------------------------ 488
            PNV TY  L+   C  G  + A + + EM                              
Sbjct: 370 FPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV 429

Query: 489 ----IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
               I+EK ++P    Y +++  L + G+L   +++ E ++ +G++
Sbjct: 430 LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 1/281 (0%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P  I +  ++    +A     A  + ++M+  GI+P+  T +++++   + G I  +  V
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           FA++L+ G  P+++TF  L++         K L  ++++   G + D ++Y  LI+  C+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G+ + A+++L  +  K   PN   ++ I   + K   VN A  +Y +M   +  P+ VT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y+ L+  F         + L   M  + + PNV T+ ILI  +C  G    A K +  ++
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA-KNVLAVM 294

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +K +K     Y  ++       Q+ K + L   M  RG T
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVT 335


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 191/409 (46%), Gaps = 41/409 (10%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G++ Q   A  F D + +   ++    +  L+    + G    A+    R++     P
Sbjct: 139 LKGQIHQ---ALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQP 195

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + +S +I  +C+ +  ++A   +  +  K   P+V+ Y+ L+ G+   G + +A  +F
Sbjct: 196 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLF 255

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M +  I+P+VYT++I++D  C+ G++     VFA M++ G +PN +T+ +LM  +   
Sbjct: 256 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 315

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               K   +   M + G   D  +YN LID  CK  K+++A+ +   M  K   P+  T+
Sbjct: 316 KEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTY 375

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + KLG ++ A ++  +M D    P+ +TY+ ++     +   D  + L  ++++
Sbjct: 376 NSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD 435

Query: 456 NEVEPN-----------------------------------VNTYRILITMYCGMGHWNN 480
             + PN                                   VNTY ++I  +C  G ++ 
Sbjct: 436 QGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 495

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A   + +M +  C+ P +  YE++++ L    +  K E+L E M+ RG 
Sbjct: 496 ALALLSKMKDNSCI-PDAVTYEIIIRSLFDKDENDKAEKLRE-MITRGL 542



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 35/352 (9%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEA 271
           G  P+ I F+ +I  LC K +  +A  F D++    F+ D + Y  L+ G C+ G    A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             + R +    +QPNV  YS +ID +C+   +  A D+++EM+  G  PN +T++ L+  
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
                + +  + ++N+M     + D  T+N L+D  CKDGK+++   V   M+++G  PN
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+  +      + +VN A  +   M      P+  +YNIL+  F   K  D  + L K
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM----------------------- 488
           EM    + P+V TY  LI   C +G  + A K + EM                       
Sbjct: 362 EMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNH 421

Query: 489 -----------IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
                      ++++ ++P    Y +++  L + G+L+    + E ++ +G+
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 473



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 181/381 (47%), Gaps = 6/381 (1%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I   C V      L +L   +    +P  V    +Y  +I+   K +  + A+     M
Sbjct: 168 LIHGLCKVGETRAALDLLRRVDGNLVQPNVV----MYSTIIDGMCKDKHVNDAFDLYSEM 223

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
            S+ +   V T+S L+  +   G   +A+  FN+M      PD   F+I++   C+  + 
Sbjct: 224 VSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 283

Query: 235 SEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            E ++ F   +K   +P+V+ Y +L+ G+C    +++A+ +   M   G+ P++ +Y+I+
Sbjct: 284 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNIL 343

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID  C+  ++  A ++F EM      P+ +T+N+L+    K  +    L++ ++M   G 
Sbjct: 344 IDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 403

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D ITY+ ++D  CK+ +++ AI +L  +  +G  PN  T+ ++   + K G +  AH 
Sbjct: 404 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  +          TY +++  F      D  L L  +M++N   P+  TY I+I    
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLF 523

Query: 474 GMGHWNNAYKYIREMIEEKCL 494
                + A K +REMI    L
Sbjct: 524 DKDENDKAEK-LREMITRGLL 543



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 164/387 (42%), Gaps = 55/387 (14%)

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----------- 247
             +A   F+R+      P  I F+ ++  L + +      S    ++ +           
Sbjct: 57  VVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQH 116

Query: 248 ------FEPDVIVYTNLVRGWCRAGNISE------------------------------- 270
                 + P+ I +T L++G C  G I +                               
Sbjct: 117 PHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVG 176

Query: 271 ----AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
               A  + R +    +QPNV  YS +ID +C+   +  A D+++EM+  G  PN +T++
Sbjct: 177 ETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 236

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+       + +  + ++N+M     + D  T+N L+D  CKDGK+++   V   M+++
Sbjct: 237 ALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 296

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN  T+  +      + +VN A  +   M      P+  +YNIL+  F   K  D  
Sbjct: 297 GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 356

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           + L KEM    + P+V TY  LI   C +G  + A K + EM  ++ + P    Y  +L 
Sbjct: 357 MNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM-HDRGVPPDIITYSSILD 415

Query: 507 QLRRAGQLQKHEELVEKMVDRGFTARP 533
            L +  Q+ K   L+ K+ D+G   RP
Sbjct: 416 ALCKNHQVDKAIALLTKLKDQGI--RP 440



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 109/259 (42%), Gaps = 17/259 (6%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N   YS +         +  A  +F+ +L     P +I FN ++   VK+     VL + 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 346 NQM----------------KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            QM                + +G   +TIT+  LI   C  G++  A+   +++V  G  
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   +  +   + K+G+   A  +  ++     +PN V Y+ ++      K  +    L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM    + PNV TY  LI+ +  +G   +A     +MI E  +KP    + +++    
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN-IKPDVYTFNILVDGFC 278

Query: 510 RAGQLQKHEELVEKMVDRG 528
           + G++++ + +   M+ +G
Sbjct: 279 KDGKMKEGKTVFAMMMKQG 297


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 160/298 (53%), Gaps = 4/298 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   + HF D + ++  ++   ++  L+    + G    AV     +E+    P
Sbjct: 147 LKGEVKR---SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 203

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           D + +S +I  LC+ +  ++A  FF  +  +   P+VI Y+ L+ G+C AG +  A  + 
Sbjct: 204 DVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLL 263

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I PNVYTY+I+IDALC+ G++  A  + AEM   G   + +T+N+++    K+
Sbjct: 264 NEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKS 323

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +K   ++ +MK+ G + +  TY  LID  CK G+L++A K+   ++ KGC  +  T+
Sbjct: 324 QNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTY 383

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           N++   + K G  + A  M  KM+D  C PN VT++I+++        D   KL   M
Sbjct: 384 NVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 166/387 (42%), Gaps = 38/387 (9%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H+P +  + +++    K++ +  A      M+ + +E  + T +IL+  +   G  A + 
Sbjct: 61  HTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSF 120

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-------------------- 243
               ++ + G  PD I  + ++  LC K     +  F D                     
Sbjct: 121 SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGL 180

Query: 244 ---------------LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
                          ++D+   PDV++Y+ ++ G C+   +++A   F EM   GI PNV
Sbjct: 181 CKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNV 240

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TYS +I   C  GQ+  A  +  EM+     PN  T+N L+    K  + ++  ++  +
Sbjct: 241 ITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAE 300

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M   G  AD +TYN ++D  CK   L+ A  +   M + G  PN  T+  +   + K G 
Sbjct: 301 MHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGR 360

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           +  A +++  +    C  +  TYN+++         D  L +K +ME+N   PN  T+ I
Sbjct: 361 LKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDI 420

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCL 494
           +I         + A K +  MI +  L
Sbjct: 421 IIRSLFEKDENDKAEKLLHGMIAKGLL 447


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 200/440 (45%), Gaps = 10/440 (2%)

Query: 93  SLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTA---RPEFVHSPD 149
            L+L F +      +SPS   + +   C  R G  L    S F  + A   RP+ V    
Sbjct: 233 GLALSFFKDMVVAGLSPSVFTYNMVIGCLAREG-DLEAARSLFEEMKAKGLRPDIVT--- 288

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            Y+ +I+  GKV     A    + MK    E  V T++ L+  + +     +A    + M
Sbjct: 289 -YNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGM 347

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           ++ G  P+ + +S +I   C+     EA  FF D ++   +P+   YT+L+   C+ G++
Sbjct: 348 KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDL 407

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           +EA ++  EM+ AG+  N+ TY+ ++D LC  G++  A ++F  +L+ G   N   + +L
Sbjct: 408 NEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL 467

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
              ++KA   EK + +  +M +   + D + Y   I   C+  ++ED++ V+  M+  G 
Sbjct: 468 FHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGL 527

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             N+  +  +     K+G    A  +  +M+DL  +   VTY +L+            ++
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
               M  N ++PN+  Y  LI   C       A     EM+ +K + P   VY  ++   
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEML-DKGISPDKLVYTSLIDGN 646

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            + G   +   L  +MV+ G
Sbjct: 647 MKHGNPGEALSLRNRMVEIG 666



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 189/391 (48%), Gaps = 4/391 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP ++   + +    R+ DL  A    + MK++ +   + T++ L+  Y + G+   AV 
Sbjct: 248 SPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVS 307

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F  M++ GC PD I ++ +I+  C+  R  +A  +   +K +  +P+V+ Y+ L+  +C
Sbjct: 308 VFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFC 367

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG + EA + F +M   G+QPN +TY+ +IDA C+ G +  A  + +EM + G   N +
Sbjct: 368 KAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIV 427

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  L+    +  R  +  +++  + + G   +   Y  L   + K   +E A+ +L  M
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            +K   P+   +      + +  ++  +  +  +M D     N+  Y  L+  +     T
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKT 547

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
              + L +EM++  ++  V TY +LI   C +G    A +Y   M     L+P   +Y  
Sbjct: 548 TEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG-LQPNIMIYTA 606

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           ++  L +   L++ + L  +M+D+G +   L
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 157/353 (44%), Gaps = 35/353 (9%)

Query: 214 CAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P    F  + ++L       EA Q F+   K +  P V     L+    ++     A 
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
             F++M +AG+ P+V+TY++VI  L R G +  A  +F EM   G  P+ +T+N+L+  +
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K       + V+ +MK  GCE D ITYN LI+C CK  ++  A + L+ M ++G  PN 
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T++ +     K G +  A++ +  M  +  +PN  TY  L+         +   KL+ E
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNA-----------------------YKYIREMI 489
           M++  V  N+ TY  L+   C  G    A                       + YI+  +
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 490 EEKC-----------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            EK            LKP   +Y   +  L R  +++    ++ +M+D G TA
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTA 529



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 180/422 (42%), Gaps = 39/422 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K  +   A+ ++  MK R ++  V T+S L+  + +AG+  EA   
Sbjct: 319 PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKF 378

Query: 206 FNRMEEYGCAPDKIAFSIVISI-----------------------------------LCR 230
           F  M   G  P++  ++ +I                                     LC 
Sbjct: 379 FVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCE 438

Query: 231 KRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
             R  EA+  F +L K  +  +  +YT+L  G+ +A  + +A  +  EM    ++P++  
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLL 498

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y   I  LCR  +I  +  V  EM++ G   NS  +  L+  + K  +T + + +  +M+
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
            LG +   +TY  LID  CK G ++ A++  + M R G  PN   +  +   + K   + 
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++ +M D    P+ + Y  L+       +    L L+  M E  +E ++  Y  LI
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +   G    A   + EM+  K + P   +   +L++    G + +   L + M  RG 
Sbjct: 679 WGFSRYGQVQLAKSLLDEML-RKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737

Query: 530 TA 531
            +
Sbjct: 738 IS 739



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 4/294 (1%)

Query: 240 FFDSL---KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           FFD L   ++   P   V+  L       G + EA + F +M    + P V + + ++  
Sbjct: 166 FFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHR 225

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           L +  +   A   F +M+  G  P+  T+N ++    +    E    ++ +MK  G   D
Sbjct: 226 LSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPD 285

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            +TYN LID + K G L  A+ V   M   GC P+  T+N +  C  K   +  A     
Sbjct: 286 IVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLH 345

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            MK    +PN VTY+ L+  F  +       K   +M    ++PN  TY  LI   C +G
Sbjct: 346 GMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG 405

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             N A+K   EM ++  +      Y  +L  L   G++++ EEL   ++  G+T
Sbjct: 406 DLNEAFKLESEM-QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWT 458



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 1/210 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   KV +   A + +  M+   ++ITV T+ +L+    + GL  +AV  F+ M
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM 592

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
              G  P+ + ++ +I  LC+     EA++ F+ + DK   PD +VYT+L+ G  + GN 
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP 652

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  +   M   G++ ++  Y+ +I    R GQ+  A  +  EML  G  P+ +    L
Sbjct: 653 GEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICL 712

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           +R + +     + L +++ M R G  + TI
Sbjct: 713 LRKYYELGDINEALALHDDMARRGLISGTI 742


>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
 gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
          Length = 796

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 172/345 (49%), Gaps = 3/345 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQSFFDS 243
            ++ LV  + RAG   +AV  F RM + G  P  + +++V+ +  +      E     DS
Sbjct: 187 AYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDS 246

Query: 244 LK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +K D  E D   Y  L+    R G   EA ++F EMK AG +P+  T++ ++D   +  +
Sbjct: 247 MKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARR 306

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
              A  V  +M   GC P+ +T+N+L+  +VK    E+ L++  +M+  G + D +TY  
Sbjct: 307 HEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 366

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI    + GK++ A+   + MVR GC+PN  T+N + +     G       ++  ++   
Sbjct: 367 LISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAG 426

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             P+ VT+N L+ +F  +     V  + KEM++    P  +TY  LI+ Y   G ++ A 
Sbjct: 427 YVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 486

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +  + MIE   + P  S Y  VL  L R G+  + E+L  +M DR
Sbjct: 487 EIYKRMIEAG-IYPDISTYNAVLSALARGGRWVQAEKLFAEMEDR 530



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 166/344 (48%), Gaps = 1/344 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   +   +  A    D MK+   E    TF+ L+  Y +A    EA+    +ME
Sbjct: 259 YNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKME 318

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             GC P  + ++ +IS   +     EA      ++ +  +PDV+ YT L+ G  R G I 
Sbjct: 319 NAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKID 378

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A   + EM   G  PN+ TY+ +I      G+ T    VF ++   G  P+ +T+N L+
Sbjct: 379 AALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLL 438

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
            V  +     +V  V+ +MK+ G   +  TY  LI  + + G  + A+++   M+  G  
Sbjct: 439 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIY 498

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ ST+N +   +++ G    A +++ +M+D  C+P+ ++Y+ L+  +A +K  D +  L
Sbjct: 499 PDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKAL 558

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
            +++    +EP+    + L+ +   +   +   K  +E+   +C
Sbjct: 559 SEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRC 602



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/405 (21%), Positives = 179/405 (44%), Gaps = 39/405 (9%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +I+   ++ + D A      M        + T++ L++ +   G   E +  
Sbjct: 359 PDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIV 418

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F+ +   G  PD + ++ ++++  +    SE    F  +K   + P+   Y +L+  + R
Sbjct: 419 FDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 478

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G   +A  +++ M  AGI P++ TY+ V+ AL R G+  +A  +FAEM +  C+P+ ++
Sbjct: 479 CGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELS 538

Query: 325 FNNLMRVHVKASRTEKVL-----------------------------------QVYNQMK 349
           +++L+  +  A + +K+                                    + + +++
Sbjct: 539 YSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELR 598

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           R  C  D    N ++  + K+  ++   +VL  M     N +A+T+N +    S+LGD  
Sbjct: 599 RRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCE 658

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
               +  ++K     P+  +YN ++  +          +L  EM+ + V+P++ TY I I
Sbjct: 659 KCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFI 718

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
             Y     +  A   +R ++ + C KP    Y  +L+   R G++
Sbjct: 719 KSYVANLMFEEAIDLVRYLVAQGC-KPNERTYNSILEGYCRHGRM 762



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/302 (19%), Positives = 136/302 (45%), Gaps = 15/302 (4%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           ++   D Y  +I+   +   FD A      M    +   + T++ ++    R G   +A 
Sbjct: 462 YIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAE 521

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
             F  ME+  C PD++++S ++      ++  + ++  + +   + EP   +   LV   
Sbjct: 522 KLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVN 581

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            +  ++SE E+ F+E++      ++   + ++    +   + +  +V   M E     ++
Sbjct: 582 NKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSA 641

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            T+N+LM ++ +    EK   +  ++K  G   D  +YN +I  + + G++++A ++ + 
Sbjct: 642 ATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSE 701

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL-------KCEPNTVTYNILMQ 435
           M   G  P+  T+N+  +          A+ M+ +  DL        C+PN  TYN +++
Sbjct: 702 MKCSGVKPDIVTYNIFIKSYV-------ANLMFEEAIDLVRYLVAQGCKPNERTYNSILE 754

Query: 436 MF 437
            +
Sbjct: 755 GY 756



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 1/169 (0%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           ++ + M+++ GK +        + LMK  ++  +  T++ L+  Y R G   +       
Sbjct: 607 NVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTE 666

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGN 267
           ++  G  PD+ +++ VI    RK +  EA   F  +K    +PD++ Y   ++ +     
Sbjct: 667 IKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLM 726

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
             EA  + R +   G +PN  TY+ +++  CR G++  A    + + ++
Sbjct: 727 FEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKI 775


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 181/408 (44%), Gaps = 44/408 (10%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF W   +  + H   +Y+ M+++  K R    A   + LM  R +E + + FS ++ 
Sbjct: 181 LDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMV 240

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEP 250
            Y RAG+   A+     M++ G  PD    +  I +L +  +  +A  F + +K    EP
Sbjct: 241 SYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEP 300

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D++ Y  L++G+C    I +A  +  EM   G  P+  +Y  V+  LC+  ++     + 
Sbjct: 301 DIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLM 360

Query: 311 AEMLE-VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
             M++     P+ +T+N L+    K    +  L    + +  G   D + Y+ ++D  CK
Sbjct: 361 ENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCK 420

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +  ++ A  ++  M  KGCNP+  T+  I     ++G ++ A +M  +M    C+PNTVT
Sbjct: 421 NKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVT 480

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y +L+                                       G+ H N      REMI
Sbjct: 481 YTVLLN--------------------------------------GLCH-NGKSLEAREMI 501

Query: 490 ---EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
              EE    P +  Y  V+  LRR G+L +  +L  +M+++GF   P+
Sbjct: 502 NVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPV 549



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 4/342 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDS 243
           T++ L+    + G A +A+      EE G   DK+ +S V+   C+ +   +A+S   D 
Sbjct: 375 TYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                 PDV+ YT ++ G+CR G I EA+++ ++M   G +PN  TY+++++ LC  G+ 
Sbjct: 435 YSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKS 494

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A ++     E    PN+IT++ +M    +  +  +   +  +M   G   + +  N L
Sbjct: 495 LEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLL 554

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C++  +  A K L   + KGC  N   F  +     ++GD++ A  M   M     
Sbjct: 555 IQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNK 614

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ +TY  L          D   +L  +M    ++P   TYR +I  +C  G  ++  K
Sbjct: 615 HPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMK 674

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            + +MI     +P  +VY  V+++L   G  ++ E+L+ K++
Sbjct: 675 LLEKMIAR---QPFKTVYNQVIEKLCYFGNREEAEKLLGKVL 713



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 194/412 (47%), Gaps = 15/412 (3%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L++L+        P+      + +  I +  K  + + A  F++ MK   +E  + +++ 
Sbjct: 252 LRILTLMQKAGVEPDL----SICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNC 307

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KD 246
           L++ Y       +A+     M   GC PDK+++  V++ LC+ R+  E +   +++    
Sbjct: 308 LIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNS 367

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PD + Y  L+    + G+  +A    RE +  G   +   YS V+D+ C+   I +A
Sbjct: 368 NLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKA 427

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +  +M   GC P+ +T+  ++    +  + ++  ++  QM + GC+ +T+TY  L++ 
Sbjct: 428 KSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNG 487

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C +GK  +A +++N        PNA T++ +   + + G ++ A  +  +M +    PN
Sbjct: 488 LCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPN 547

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEE---NEVEPNVNTYRILITMYCGMGHWNNAYK 483
            V  N+L+Q    +++   V+  KK +EE        NV  +  +I  +C +G  + A  
Sbjct: 548 PVDINLLIQSLCRNQN---VVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALS 604

Query: 484 YIREM-IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            + +M +  K   P +  Y  +   L +  +L +  EL+ KM+ +G    P+
Sbjct: 605 MLEDMYLSNK--HPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPV 654



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 175/380 (46%), Gaps = 4/380 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K +  D A   +  M S+     V T++ ++  + R G   EA     +M 
Sbjct: 411 YSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMY 470

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNIS 269
           ++GC P+ + ++++++ LC   ++ EA+   + S +  + P+ I Y+ ++ G  R G +S
Sbjct: 471 KHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLS 530

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  + REM   G  PN    +++I +LCR   +  A     E L  GC  N + F +++
Sbjct: 531 EACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVI 590

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +    +  L +   M       D ITY  L D   K  +L++A +++  M+ KG +
Sbjct: 591 YGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGID 650

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P   T+  +     + G V+   ++  KM  +  +P    YN +++      + +   KL
Sbjct: 651 PTPVTYRAVIHRFCQWGRVDDMMKLLEKM--IARQPFKTVYNQVIEKLCYFGNREEAEKL 708

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             ++     + +  T  ILI  Y   G+  +AYK   +M     L P   + E V ++L 
Sbjct: 709 LGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRN-LIPDLKLCEKVTKKLV 767

Query: 510 RAGQLQKHEELVEKMVDRGF 529
             G   + ++L+ + V+RG 
Sbjct: 768 LDGMPAEADDLMLRFVERGI 787


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 181/370 (48%), Gaps = 5/370 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L   MI+  G+  +  +A    +   S     TV  FS L+  Y R+GL  EA+  FN M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQ--SFFDSL-KDKFEPDVIVYTNLVRGWCRAG 266
           +EYG  P+ + ++ VI   C K      Q   FFD + ++  +PD I + +L+    R G
Sbjct: 295 KEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGG 353

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
               A  +F EM    I+ +V++Y+ ++DA+C+ GQ+  A ++ A+M      PN ++++
Sbjct: 354 LWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYS 413

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            ++    KA R ++ L ++ +M+ L    D ++YN L+  + K G+ E+A+ +L  M   
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   +  T+N +     K G  +   +++ +MK     PN +TY+ L+  ++        
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +++ +E +   +  +V  Y  LI   C  G   +A   I EM +E  + P    Y  ++ 
Sbjct: 534 MEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIID 592

Query: 507 QLRRAGQLQK 516
              R+  +++
Sbjct: 593 AFGRSATMER 602



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 168/391 (42%), Gaps = 66/391 (16%)

Query: 105 HSISPSTVRH-VIEKSCGVRHGIPLLQVLSFFNWVT---ARPEFVHSPDLYHEMINLAGK 160
           + + P+ V +  +  +CG + G+   QV  FF+ +     +P+ +     ++ ++ +  +
Sbjct: 297 YGLRPNLVTYNAVIDACG-KGGMEFKQVAKFFDEMQRNCVQPDRI----TFNSLLAVCSR 351

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
              ++ A +  D M +R +E  V +++ L+    + G    A     +M      P+ ++
Sbjct: 352 GGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVS 411

Query: 221 FSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           +S VI    +  R  EA + F  ++      D + Y  L+  + + G   EA  + REM 
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             GI+ +V TY+ ++    + G+      VFAEM      PN +T++ L+  + K    +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYK 531

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           + ++V+ + K  G  AD + Y+ LID  CK+G +  A+ +++ M ++G +PN  T+N I 
Sbjct: 532 EAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591

Query: 400 -------------------------------------RCISKLGDVN--GAHRM------ 414
                                                R I   G +   G +RM      
Sbjct: 592 DAFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKE 651

Query: 415 -----------YGKMKDLKCEPNTVTYNILM 434
                      + KM  L+ +PN VT++ ++
Sbjct: 652 GMQELSCILEVFRKMHQLEIKPNVVTFSAIL 682



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 19/287 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++++  KV + + A   +  M S  ++  V T++ L+  Y + G   E    F  M+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMK 506

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
                P+ + +S +I    +     EA   F   K      DV++Y+ L+   C+ G + 
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVG 566

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +  EM   GI PNV TY+ +IDA  R   + R+ D             S+ F++  
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADY--------SNGGSLPFSSSA 618

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG--KLEDAIKVLNSMVRKG 387
              +  +   +V+Q++ Q+   G        N  +   CK+G  +L   ++V   M +  
Sbjct: 619 LSELTETEGNRVIQLFGQLTSEG--------NNRMTKDCKEGMQELSCILEVFRKMHQLE 670

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
             PN  TF+ I    S+      A  +  +++    +   V + +LM
Sbjct: 671 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLM 717


>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 166/336 (49%), Gaps = 6/336 (1%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           ++I++    R GL  +    F+ M  +G AP   +F+ +I+   R  +   +    D +K
Sbjct: 149 YTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMK 208

Query: 246 -DKFEPDVIVYTNLVRGWCRAG-NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            ++  P ++ Y  ++    R G +  E   +F +M+  GIQ ++ TY+ ++ A  R G  
Sbjct: 209 KERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLG 268

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  VF  M E G  P+  T++ L+    K +R EKV ++  +M+  G   D  +YN L
Sbjct: 269 DEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVL 328

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++ H + G +++A+ V   M   GC PNA+T++++     + G  +    ++ +MK    
Sbjct: 329 LEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNT 388

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           EPN  TYNIL+ +F        V+ L  +M E  VEPN+ TY  LI   CG G  +   K
Sbjct: 389 EPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLI-FACGKGGLHEDAK 447

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
            I   + EK + P S  Y  V++     GQ   +EE
Sbjct: 448 KILLHMNEKGVVPSSKAYTGVIEAY---GQAALYEE 480



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 176/369 (47%), Gaps = 5/369 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA-FNRM 209
           +  +IN  G+  Q+  +   +D MK   V  ++ T++ ++    R GL  E +   F +M
Sbjct: 184 FTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQM 243

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
              G   D + ++ ++S   R+    EA+  F ++ +    PD+  Y+ LV  + +   +
Sbjct: 244 RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRL 303

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +   + +EM+  G  P++ +Y+++++A  + G I  A  VF +M   GC PN+ T++ L
Sbjct: 304 EKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSIL 363

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + ++ +  R + V  ++ +MK    E +  TYN LI+   + G  ++ + + + MV +  
Sbjct: 364 LNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENV 423

Query: 389 NPNASTF-NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
            PN  T+  +IF C  K G    A ++   M +    P++  Y  +++ +  +   +  L
Sbjct: 424 EPNMETYEGLIFAC-GKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEAL 482

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
                M E   +P V TY  LI M+   G +  +   + +M +    +     +  V++ 
Sbjct: 483 VAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVAR-NRDTFNGVIEA 541

Query: 508 LRRAGQLQK 516
            R+ GQ ++
Sbjct: 542 FRQGGQFEE 550



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/424 (20%), Positives = 184/424 (43%), Gaps = 46/424 (10%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  ++   GK+ + +     +  M+S      + ++++L+  + ++G   EA+  
Sbjct: 285 PDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGV 344

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF------------------------ 241
           F +M+  GC P+   +SI++++  R  R  + +  F                        
Sbjct: 345 FRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGE 404

Query: 242 ------------DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
                       D +++  EP++  Y  L+    + G   +A+++   M   G+ P+   
Sbjct: 405 GGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKA 464

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ VI+A  +      A   F  M EVG +P   T+N+L+++  K    ++   +  +M 
Sbjct: 465 YTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMG 524

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
           + G   +  T+N +I+   + G+ E+AIK    M +  C+P+  T   +       G V 
Sbjct: 525 QSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVE 584

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            +   +G++K L   P+ + Y +++ ++A +   D   +L  EM  N V    N ++++ 
Sbjct: 585 ESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVS---NIHQVIG 641

Query: 470 TM----YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            M    Y    +W    +Y+ E ++ +    G   Y  +L+ L   GQ ++   ++ +  
Sbjct: 642 QMIRGDYDDDSNW-QMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEAT 700

Query: 526 DRGF 529
            RG 
Sbjct: 701 KRGL 704



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 160/346 (46%), Gaps = 39/346 (11%)

Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           F++V     ++     +   F  ++ +   +P+  +YT ++    R G + + + +F EM
Sbjct: 113 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEM 172

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              G+ P+V++++ +I+A  R GQ   + ++   M +    P+ +T+N ++    +    
Sbjct: 173 PSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLD 232

Query: 339 -EKVLQVYNQMKRLGCEADTITYN-----------------------------------F 362
            E++L ++ QM+  G +AD +TYN                                   +
Sbjct: 233 WEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSY 292

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L++   K  +LE   ++L  M   G  P+ +++N++    ++ G +  A  ++ +M+   
Sbjct: 293 LVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAG 352

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C PN  TY+IL+ ++      D V  L  EM+ +  EPN  TY ILI ++   G++    
Sbjct: 353 CVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVV 412

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               +M+EE  ++P    YE ++    + G  +  ++++  M ++G
Sbjct: 413 TLFHDMVEEN-VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKG 457



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/459 (20%), Positives = 193/459 (42%), Gaps = 45/459 (9%)

Query: 107 ISPSTVRH-VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL-YHEMINLAGKVRQF 164
           +SPS + +  +  SC  R G+   ++L  F     R E + +  + Y+ +++   +    
Sbjct: 212 VSPSILTYNTVINSC-ARGGLDWEELLGLF--AQMRHEGIQADIVTYNTLLSACARRGLG 268

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D A      M    +   + T+S LV  + +     +       ME  G  PD  +++++
Sbjct: 269 DEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVL 328

Query: 225 ISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           +    +     EA   F  ++     P+   Y+ L+  + R G   +   +F EMK++  
Sbjct: 329 LEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNT 388

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL--------------- 328
           +PN  TY+I+I+     G       +F +M+E   EPN  T+  L               
Sbjct: 389 EPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKK 448

Query: 329 --------------------MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
                               +  + +A+  E+ L  +N M  +G +    TYN LI    
Sbjct: 449 ILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFA 508

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K G  +++  +L  M + G   N  TFN +     + G    A + Y +M+  +C+P+  
Sbjct: 509 KGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQ 568

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           T   ++ ++  +   +   +   E++   + P+V  Y +++ +Y     W++A++ + EM
Sbjct: 569 TLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM 628

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
              +     S++++++ Q +R       + ++VE + ++
Sbjct: 629 FTNRV----SNIHQVIGQMIRGDYDDDSNWQMVEYVFEK 663



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 12/298 (4%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V S   Y  +I   G+   ++ A    + M     + TV+T++ L++ + + GL  E+  
Sbjct: 459 VPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEA 518

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWC 263
              +M + G A ++  F+ VI    +  +  EA +++ +  K + +PD      ++  +C
Sbjct: 519 ILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYC 578

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AG + E+E  F E+K  GI P+V  Y +++    +  +   AH +  EM          
Sbjct: 579 FAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQ 638

Query: 324 TFNNLMRV-HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
               ++R  +   S  + V  V+ ++K  GC      YN L++     G+ E A +VLN 
Sbjct: 639 VIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNE 698

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             ++G  P       +FR    +  V+  HRM+   +   C   +V  N + +MF + 
Sbjct: 699 ATKRGLFPE------LFRKNKLVWSVD-VHRMW---EGAACTAISVWLNNMHEMFISG 746


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 190/386 (49%), Gaps = 5/386 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I    K  +F  A  ++  + +  +E    T++ L+  Y + G+   A   
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
                  G  PD+  +  +I  LC +   + A + F ++L    +P+VI+Y  L++G   
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G I EA ++  EM   G+ P V T++I+++ LC+ G ++ A  +   M+  G  P+  T
Sbjct: 404 QGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           FN L+  +    + E  L++ + M   G + D  TYN L++  CK  K ED ++   +MV
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KGC PN  TFN++   + +   ++ A  +  +MK+    P+ VT+  L+  F  +   D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 445 MVLKLKKEMEE-NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
               L ++MEE   V  +  TY I+I  +    +   A K  +EM+ ++CL P    Y +
Sbjct: 584 GAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMV-DRCLGPDGYTYRL 642

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++    + G +    + + +M++ GF
Sbjct: 643 MVDGFCKTGNVDLGYKFLLEMMENGF 668



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 181/403 (44%), Gaps = 3/403 (0%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD-LAWHFIDLMKSRNVEITVDTFS 187
           ++ L  FN +     F H+   Y  +I   G   +F+ +    +D+ ++    +    + 
Sbjct: 21  MKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYV 80

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
             ++ Y R G   EAV+ F RM+ Y C P   +++ ++SIL       +A   +  ++D+
Sbjct: 81  GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDR 140

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              PDV  +T  ++ +CR      A R+   M   G + NV  Y  V+            
Sbjct: 141 GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEG 200

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           +++F +ML  G      TFN L+ V  K    ++  ++ +++ + G   +  TYNF I  
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQG 260

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+ G+L+ A++++  ++ +G  P+  T+N +   + K      A    GK+ +   EP+
Sbjct: 261 LCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPD 320

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           + TYN L+  +       +  ++      N   P+  TYR LI   C  G  N A     
Sbjct: 321 SFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFN 380

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           E +  K +KP   +Y  +++ L   G + +  +L  +M ++G 
Sbjct: 381 EAL-GKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 170/364 (46%), Gaps = 2/364 (0%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D  +     M +  V + + TF+ L+    + G   E     +++ + G  P+   ++  
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257

Query: 225 ISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           I  LC+K     A      L D+  +PDV+ Y  L+ G C+     EAE    ++   G+
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
           +P+ +TY+ +I   C+ G +  A  +    +  G  P+  T+ +L+        T + L 
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
           ++N+    G + + I YN LI      G + +A ++ + M  KG  P   TFN++   + 
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLC 437

Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
           K+G V+ A  +   M      P+  T+NIL+  ++T    +  L++   M +N V+P+V 
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVY 497

Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
           TY  L+   C    + +  +  + M+E+ C  P    + ++L+ L R  +L K   L+E+
Sbjct: 498 TYNSLLNGLCKTSKYEDVMETYKTMVEKGC-APNLFTFNILLESLCRYHKLDKALGLLEE 556

Query: 524 MVDR 527
           M ++
Sbjct: 557 MKNK 560



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 6/258 (2%)

Query: 146 HSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + PD++   I + G   Q  +  A   +D+M    V+  V T++ L+    +     + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVM 516

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
             +  M E GCAP+   F+I++  LCR  +  +A    + +K+K   PD + +  L+ G+
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGF 576

Query: 263 CRAGNISEAERVFREMK-MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           C+ G++  A  +FR+M+ +  +  +  TY+I+I A      +T A  +F EM++    P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  ++    K    +   +   +M   G      T   +I+C C + ++ +A  +++
Sbjct: 637 GYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696

Query: 382 SMVRKGCNPNASTFNMIF 399
            MV+KG  P A   N IF
Sbjct: 697 RMVQKGLVPEA--VNTIF 712


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 192/380 (50%), Gaps = 2/380 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++N      + D A+   D M+  NV   V T++ L+    +   ++E       M+
Sbjct: 321 YNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMD 380

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G   + + ++I++  +C+K   +EA +  D +++    PD + Y  L+  +C+AG + 
Sbjct: 381 KKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG 440

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+  EM   G++ + +T + ++  LC   ++  A+++     + G   + +++  L+
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILI 500

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K  + ++ L ++++MK       TITYN +I   C+  K++ AI  LN M+  G  
Sbjct: 501 LGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLV 560

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+ +T+N+I       G+V  A + + +M +   +P+  T NIL++        +  LKL
Sbjct: 561 PDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKL 620

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              +     + +V TY  +I+  C  G + NAY  + EM E K L P    Y++++  L 
Sbjct: 621 FNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEM-EAKKLGPDQYTYKVIIAALT 679

Query: 510 RAGQLQKHEELVEKMVDRGF 529
            AG++++ EE   KMV+ G 
Sbjct: 680 DAGRIKEAEEFTLKMVESGI 699



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 14/384 (3%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           +I+     RQ +L  H + L  +R++ E + +     +  YV+      A   FN+M+  
Sbjct: 112 LISFISSDRQHEL--HKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL 169

Query: 213 GCAPDKIAFSIVISILCRKRRASEA----QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
              P+ +  + +++ L R   +S      Q   DS+K    P+   +  L+ G+C    +
Sbjct: 170 NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKV 229

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +A     +M   G  P+  +Y+ ++DAL +   +  A D+  +M   G  PN  T+N L
Sbjct: 230 KDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNML 289

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +  + +    ++  +V   M R        TYN L++  C DGK+++A ++ + M +   
Sbjct: 290 VCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNV 349

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKM--KDLKCEPNTVTYNILMQ-MFATSKSTDM 445
            P+  T+N +    S+  D +  + +  +M  K +KC  N VTYNI+++ M      T+ 
Sbjct: 350 LPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKC--NAVTYNIILKWMCKKGNMTEA 407

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L K MEEN + P+  TY  LI  YC  G    A++ + EM   K LK  +     +L
Sbjct: 408 TTTLDK-MEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT-SKGLKIDTWTLNTIL 465

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L    +L +   L+     RG+
Sbjct: 466 HCLCVEKKLDEAYNLLCSASKRGY 489



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 25/279 (8%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  + D A +  D MK R +  +  T++ ++    ++    +A+   N M E G  PD+ 
Sbjct: 505 KDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDET 564

Query: 220 AFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++I+I   C +    +A  F + + ++ F+PDV     L+RG CR G + +A ++F  +
Sbjct: 565 TYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTL 624

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              G   +V TY+ +I +LC+ G+   A+D+  EM      P+  T+  ++     A R 
Sbjct: 625 VSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRI 684

Query: 339 EKVLQ----------VYNQMKRLGCEADTIT-------------YNFLIDCHCKDGKLED 375
           ++  +          V++Q  +LG   + +T             Y+  I+  C   K +D
Sbjct: 685 KEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKD 744

Query: 376 AIKVLNSMVRKGCNPNASTF-NMIFRCISKLGDVNGAHR 413
           A+ +   + ++G   N  T+ N++   I +    + A R
Sbjct: 745 AMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR 783



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/183 (20%), Positives = 71/183 (38%), Gaps = 26/183 (14%)

Query: 143 EFVHSPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           E +  PD+Y   I L G  R+   + A    + + S+  +I V T++ ++    + G   
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF------------------- 241
            A      ME     PD+  + ++I+ L    R  EA+ F                    
Sbjct: 651 NAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKG 710

Query: 242 -----DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
                  + + F+   I Y++ +   C      +A  +F E+   G+  N YTY  +++ 
Sbjct: 711 QNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEG 770

Query: 297 LCR 299
           L +
Sbjct: 771 LIK 773


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 199/454 (43%), Gaps = 55/454 (12%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID-----LMKSRNVEI--- 181
           Q L  F+ V+ R +   +P LY  +I++    + +  A   +      L KSR   I   
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCS 111

Query: 182 -------------TVDTFSILVRRYVRAGLAAEAVHAFNRME------------------ 210
                        T + F +L+  +   GL  EA+  + +M+                  
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK 171

Query: 211 --------------EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVY 255
                           G +P+ + +  +I   CR+    +A   FD + + K  P V++Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
           T L+RG C    ISEAE +FR M+ +G+ PN+YTY+ ++D  C+   + +A +++ EML 
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLG 291

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G  PN +TF  L+    K        +    M   G   +   YN LID +CK G L +
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A+ + + + +    P+  T++++ + +  +  +  A  +  +MK     PN VTYN L+ 
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            +    + +  +++  +M E  +EPN+ T+  LI  YC  G    A     EM+  K L 
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV-IKGLL 470

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           P    Y  ++    + G  ++   L ++M + G 
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 173/383 (45%), Gaps = 36/383 (9%)

Query: 137 WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA 196
           WV  + + + +    + +++   K  +FD  W     M +R     V T+  L+    R 
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
           G   +A   F+ M E    P  + ++I+I  LC + R SEA+S F ++++    P++  Y
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
             ++ G+C+  ++ +A  ++ EM   G+ PNV T+ I+ID LC+  ++  A     +M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 316 VGCEPNSITFNNLMRVHVKAS-----------------------------------RTEK 340
            G  PN   +N L+  + KA                                    R E+
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
              +  +MK+ G   + +TYN LID +CK+G +E AI+V + M  KG  PN  TF+ +  
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
              K G +  A  +Y +M      P+ V Y  L+       +T    +L KEM+E  + P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 461 NVNTYRILITMYCGMGHWNNAYK 483
           NV T   LI   C  G  ++A K
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIK 529



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 167/338 (49%), Gaps = 14/338 (4%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F+  M S  V   +  ++ L+  Y +AG  +EA+   + +E++   PD   +SI+I 
Sbjct: 317 ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIK 376

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   R  EA      +K K F P+ + Y  L+ G+C+ GN+ +A  V  +M   GI+P
Sbjct: 377 GLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP 436

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N+ T+S +ID  C+ G++  A  ++ EM+  G  P+ + +  L+  H K   T++  +++
Sbjct: 437 NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLH 496

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL-------------NSMVRKGCNPNA 392
            +M+  G   +  T + LID  CKDG++ DAIK+              N + R  C+PN 
Sbjct: 497 KEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH 556

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
             +  + + +   G +  A + +  M+     P+  T  +++Q    +     V+ L+ +
Sbjct: 557 VMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQAD 616

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           + +  + PN + YR+L   Y   G+  +A  +  E ++
Sbjct: 617 ILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQ 654



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 51/289 (17%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++   I + G   V + + A   +  MK +       T++ L+  Y + G   +A+  
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            ++M E G  P+ I FS +I   C+  +   A   +  +  K   PDV+ YT L+ G  +
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALC-------------------------- 298
            GN  EA R+ +EM+ AG+ PNV+T S +ID LC                          
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 299 ----------------------RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
                                   G+I +A   F++M   G  P+  T   +++ H +A 
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAM 605

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
               V+ +   + ++G   ++  Y  L   + + G L+ A+      V+
Sbjct: 606 HLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQ 654



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 86/431 (19%), Positives = 163/431 (37%), Gaps = 81/431 (18%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF-------------NRMEEYGCAPDKIA 220
           M+   +   V T S L+    + G  ++A+  F             N ++   C+P+ + 
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVM 558

Query: 221 FSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           ++ +I  LC   R  +A  FF  ++     PDV     +++G  RA ++ +   +  ++ 
Sbjct: 559 YTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE----VGCEP-NSITFNNLMRVHVK 334
             GI PN   Y ++       G +  A     E ++    V  EP  S T  +  ++ V 
Sbjct: 619 KMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVV 678

Query: 335 ASRTE------------------------------------------------KVLQVYN 346
             + E                                                K LQ++ 
Sbjct: 679 TEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFR 738

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCNPNASTFNMIFRCISKL 405
           QM+    + D +T    +   C D    D  + +++ +R +G + +    N +    SK 
Sbjct: 739 QMQMDDXQPDIVTVTVALSA-CADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKC 797

Query: 406 GDVNGAHRMYG--KMKDLKCEPNTVTYNIL-------MQMFATSKSTDMVLKLKK---EM 453
           G++  A R++   + KD+    + +  + L       +Q+F   K T+   +  K   E 
Sbjct: 798 GEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEX 857

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           E + V PN  T+  ++      G      ++ R M E+  L+P  S +  ++  L RAG 
Sbjct: 858 ESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGL 917

Query: 514 LQKHEELVEKM 524
           L +  E + KM
Sbjct: 918 LTEAYEFILKM 928



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/238 (18%), Positives = 101/238 (42%), Gaps = 28/238 (11%)

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           ++A ++FR+M+M   QP++ T ++ + A    G +     + A +   G + +    N+L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + ++ K        ++++  ++     D  T+  +I  H   G+ E+A+++   M  K  
Sbjct: 791 INMYSKCGEIGTARRLFDGTQK----KDVTTWTSMIVGHALHGQAEEALQLFTEM--KET 844

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY-NILMQMFATSKSTDMVL 447
           N  A                   ++  G+ +     PN VT+  +LM         +   
Sbjct: 845 NKRARK-----------------NKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQ 887

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
             +   E+  + P ++ +  ++ + C  G    AY++I +M     ++P + V+  +L
Sbjct: 888 HFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP----VRPNAVVWRTLL 941


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 188/423 (44%), Gaps = 40/423 (9%)

Query: 146 HSPDL--YHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           + PD+  Y+ +IN L  + RQ D A+H  D M  + +   V T++ ++    +A    +A
Sbjct: 198 YPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKA 257

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRG 261
                RM + G  P++I  + ++   C   + ++A   F  + +D  EPDV  Y  L+  
Sbjct: 258 AVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGY 317

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+ G   EA ++F  M   G +PN  TY  ++      G + + H +   M+  G +P+
Sbjct: 318 LCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPD 377

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
              FN L+  + K  + +  + ++++M+R G   DT+TY  ++D  C  GK++DA+    
Sbjct: 378 HYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFG 437

Query: 382 SMVRKGCNPNAST-----------------------------------FNMIFRCISKLG 406
            ++ +G  P+A                                     FN +   + K G
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V  A  ++  M  +  + + +TYN L+  +      D   KL + M  + V+PN  TY 
Sbjct: 498 MVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            +I  YC  G   +A+   R+M   K + PG   Y  +LQ L +A +    +EL   M+ 
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQM-ASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIK 616

Query: 527 RGF 529
            G 
Sbjct: 617 SGI 619



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 170/388 (43%), Gaps = 44/388 (11%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF---- 240
           T+S+++    R G    A  A  R+   G   + I FS ++  LC K+R SEA       
Sbjct: 93  TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRR 152

Query: 241 --------------------------------------FDSLKDKFEPDVIVYTNLVRGW 262
                                                  D  +  + PDV+ Y  ++ G 
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212

Query: 263 CRAG-NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            R G  +  A  +F +M   G+ P+V TY+ +I AL +   + +A  V   M++ G  PN
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            IT N+L+  +  + +    + V+ +M R G E D  TYN L+   CK+G+  +A K+ +
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
           SMV++G  PN++T+  +    +  G +   H +   M     +P+   +NIL+  +    
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHG 392

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             D  + L  +M    + P+  TY I++   C +G  ++A      +I E  L P + V+
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG-LTPDAVVF 451

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             ++  L    +  K EEL  +M+ RG 
Sbjct: 452 RNLIHGLCARDKWDKAEELAVEMIGRGI 479



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/463 (22%), Positives = 195/463 (42%), Gaps = 86/463 (18%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y+ +I+   K R  D A   +  M          T + L+  Y  +G   +A+ 
Sbjct: 235 SPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIG 294

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-------------------- 244
            F RM   G  PD   ++ ++  LC+  R+ EA+  FDS+                    
Sbjct: 295 VFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYA 354

Query: 245 ----------------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
                           ++  +PD  ++  L+  + + G + +A  +F +M+  G+ P+  
Sbjct: 355 TEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTV 414

Query: 289 TYSIVIDALCRCGQIT-----------------------------------RAHDVFAEM 313
           TY IV+DALC  G++                                    +A ++  EM
Sbjct: 415 TYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEM 474

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
           +  G  PN+I FN L+    K     +   +++ M R+  + D ITYN LID +C  GK+
Sbjct: 475 IGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKV 534

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
           ++A K+L  MV  G  PN  T+N +     K G +  A  ++ +M      P  VTY+ +
Sbjct: 535 DEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTI 594

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM----- 488
           +Q    ++ T    +L   M ++ ++ ++ TY I++   C     ++A +  + +     
Sbjct: 595 LQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDF 654

Query: 489 -IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +E +        + +++  L + G+  + ++L   ++ RG  
Sbjct: 655 HLENR-------TFNIMIDALLKGGRHDEAKDLFASLLARGLV 690



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 148/306 (48%), Gaps = 3/306 (0%)

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEA 271
           G  P+ I F+ +++ LC++   + A++ FD + +   + DVI Y  L+ G+C  G + EA
Sbjct: 478 GICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEA 537

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            ++   M + G++PN  TY+ +I+  C+ G+I  A  +F +M   G  P  +T++ +++ 
Sbjct: 538 AKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQG 597

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             +A RT    ++Y  M + G + D  TYN ++   C++   +DA+++  ++     +  
Sbjct: 598 LFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLE 657

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             TFN++   + K G  + A  ++  +      PN VTY ++M+        + +  L  
Sbjct: 658 NRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFL 717

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
            +E+N    N      L+      G    A  Y+ ++ E       S+   +VL  L  +
Sbjct: 718 SLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLVL--LVSS 775

Query: 512 GQLQKH 517
           G+  +H
Sbjct: 776 GKYDQH 781



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 15/304 (4%)

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV--FREMKMAG---IQPNVYTYS 291
           A   FD L  +     IV  +L R    A   S A  +  FR M M     + PN+ TYS
Sbjct: 38  AHHAFDELLHRPTTSSIV--DLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYS 95

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV-YNQMKR 350
           +VID   R G +  A      ++  G    +ITF+ L++      RT + + +   +M  
Sbjct: 96  VVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPV 155

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV-----RKGCNPNASTFNMIFRCISKL 405
           LGC  +  +Y  L+   C + + + A+ +L++M+     R G  P+  ++N +   + + 
Sbjct: 156 LGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLRE 215

Query: 406 G-DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           G  ++ A+ ++ +M D    P+ VTYN ++   + +++ D    +   M +N   PN  T
Sbjct: 216 GRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRIT 275

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +  L+  YC  G  N+A    + M  +  ++P    Y  ++  L + G+  +  ++ + M
Sbjct: 276 HNSLLHGYCSSGKPNDAIGVFKRMCRDG-VEPDVFTYNTLMGYLCKNGRSMEARKIFDSM 334

Query: 525 VDRG 528
           V RG
Sbjct: 335 VKRG 338



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 1/180 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MIN   K  + + A+     M S+ V   + T+S +++   +A   A A   +  M 
Sbjct: 556 YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMI 615

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           + G   D   ++I++  LC+     +A   F +L    F  +   +  ++    + G   
Sbjct: 616 KSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHD 675

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ +F  +   G+ PNV TY +++ +L   G +    D+F  + + GC  NS   N L+
Sbjct: 676 EAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV 735


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 178/401 (44%), Gaps = 37/401 (9%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           +AW   + M   N++ ++ TF+I++    R G   +A      ME YG  P+ + ++ VI
Sbjct: 200 MAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVI 259

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           +  C + +   A   F ++KDK  +PD   Y + +   C+   I EA  V  ++  +G+ 
Sbjct: 260 NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PN  TY+ +ID  C  G + +A     EM+  G   +  T+N L+       R E+   +
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +M+  G E D +TYN  I+ +C+ G  + A+ + + MV K   P   T+  +     K
Sbjct: 380 IKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGK 439

Query: 405 L-----------------------------------GDVNGAHRMYGKMKDLKCEPNTVT 429
                                               G+++ A ++  +M + K  P+ VT
Sbjct: 440 RNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVT 499

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +N LMQ +   +  +   KL  EM+E  ++P+  +Y  LI+ Y   G   +A +   EM+
Sbjct: 500 FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML 559

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
                 P    Y  ++Q   + G+    EEL+ +M  +G T
Sbjct: 560 SLG-FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGIT 599



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 188/405 (46%), Gaps = 37/405 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ MIN+  +  ++  A  FI  M+   V+  V T++ ++  Y   G    A   F  M+
Sbjct: 220 FNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMK 279

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGN-- 267
           +    PD   ++  IS LC++RR  EA       L+    P+ + Y  L+ G C  G+  
Sbjct: 280 DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLD 339

Query: 268 ---------------------------------ISEAERVFREMKMAGIQPNVYTYSIVI 294
                                            I EAE + +EM+  G++P+V TY+I I
Sbjct: 340 KAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQI 399

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +  CRCG   +A  +F EM+E    P   T+ +L+ V  K +R  +  + + +  + G  
Sbjct: 400 NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML 459

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D I +N LID HC +G ++ A ++L  M      P+  TFN + +   +   V  A ++
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKL 519

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
             +MK+   +P+ ++YN L+  ++        L++  EM     +P + TY  LI  Y  
Sbjct: 520 LDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           +G  ++A + +REM + K + P  S Y  V++ ++    L ++++
Sbjct: 580 IGEADHAEELLREM-QSKGITPDDSTYLYVIEAMKTNDDLVENDD 623



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 186/372 (50%), Gaps = 4/372 (1%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           + R+ D A   ++LMK   +    +T + L+   ++      A   +  M +       +
Sbjct: 159 QFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIV 218

Query: 220 AFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            F+I+I+ILCR+ +  +A+ F   ++    +P+V+ Y  ++ G+C  G    A ++F+ M
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           K   ++P+ YTY+  I  LC+  +I  A  V  ++LE G  PN++T+N L+         
Sbjct: 279 KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDL 338

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +K     ++M   G  A   TYN LI     + ++E+A  ++  M  KG  P+  T+N+ 
Sbjct: 339 DKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQ 398

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT-SKSTDMVLKLKKEMEENE 457
                + G+   A  ++ +M +    P   TY  L+ +F   ++ ++   K KK ++E  
Sbjct: 399 INGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGM 458

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + P++  +  LI  +C  G+ + A++ ++EM   K + P    +  ++Q   R  ++++ 
Sbjct: 459 L-PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVV-PDEVTFNTLMQGYCRERKVEEA 516

Query: 518 EELVEKMVDRGF 529
           ++L+++M +RG 
Sbjct: 517 KKLLDEMKERGI 528



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 149/311 (47%), Gaps = 2/311 (0%)

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + F +++S  C+ R+  EA    + +K+ +  P      +L+    +   I  A  V+ E
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    I+ ++ T++I+I+ LCR G+  +A D    M   G +PN +T+N ++  +    +
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E   +++  MK    + D  TYN  I   CK+ ++E+A  VL  ++  G  PNA T+N 
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +       GD++ A     +M +     +  TYN+L+      K  +    + KEM E  
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           VEP+V TY I I  YC  G+   A     EM+ EK ++P    Y  ++    +  ++ + 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMV-EKNIRPTVETYTSLIDVFGKRNRMSEA 446

Query: 518 EELVEKMVDRG 528
           EE  +K +  G
Sbjct: 447 EEKFKKSIKEG 457



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
           T+ ++ L+  +C+  K ++A++ LN M      P   T N +   + KL  +  A  +Y 
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M  +  + + VT+NI++ +                ME   V+PNV TY  +I  YC  G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +  A K  + M ++K LKP    Y   + +L +  ++++   ++ K+++ G 
Sbjct: 267 KFEAASKIFKTM-KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL 318



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 1/210 (0%)

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           ++ F+ L+  + +  + ++ L+  N MK       T T N L+    K  K++ A  V  
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            MV+     +  TFN++   + + G    A    G M+    +PN VTYN ++  +    
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             +   K+ K M++  ++P+  TY   I+  C       A   + +++E   L P +  Y
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG-LVPNAVTY 325

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             ++      G L K     ++M++RG  A
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVA 355


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 164/329 (49%), Gaps = 5/329 (1%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCR 264
           RM E GC PD  +++IV+  LC   R+ +A      +  +     PDV+ Y  ++ G+ +
Sbjct: 69  RMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFK 128

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G I +A  ++ EM   G  P+V T++ +I+ALC+   +  A  +  +M++ G  PN +T
Sbjct: 129 EGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVT 188

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +++  +    R E+  +++ +M   G   D +++N  +D  CK G+ ++A ++  SM 
Sbjct: 189 YTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMA 248

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KG  PN  T+ ++    +  G        +  MK      N + + IL+  +A     D
Sbjct: 249 AKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMD 308

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             + +  EM+   + P+V TY  LI+  C MG   +A     +MI    ++P + VY  +
Sbjct: 309 EAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG-VQPNTVVYHSL 367

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           +Q     G L K +ELV +M++ G   RP
Sbjct: 368 IQGFCTHGDLVKAKELVYEMMNNGI-PRP 395



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 178/387 (45%), Gaps = 5/387 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ +IN   K R  D A   +  M    V     T++ ++  Y   G   EA   
Sbjct: 149 PDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKM 208

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M   G  PD ++++  +  LC+  R+ EA   F S+  K   P+++ Y  L+ G+  
Sbjct: 209 FREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYAT 268

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G  ++    F  MK  GI  N   ++I+IDA  + G +  A  + +EM   G  P+  T
Sbjct: 269 EGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFT 328

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+    +  R    +  +NQM   G + +T+ Y+ LI   C  G L  A +++  M+
Sbjct: 329 YSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMM 388

Query: 385 RKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             G   PN + FN I   I K G V  AH ++  +KD+    + + +N L+  +      
Sbjct: 389 NNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEM 448

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
                +   M    + P+  TY  L+  Y   G  ++     REM ++K +KP +  Y +
Sbjct: 449 GKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKK-IKPTTVTYNI 507

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +L  L RAG+    ++++ +M+  G T
Sbjct: 508 ILDGLFRAGRTVAAQKMLHEMIGCGTT 534



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 176/348 (50%), Gaps = 3/348 (0%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T++ ++  + + G   +A + ++ M + G  PD +  + +I+ LC+ R    A+    
Sbjct: 116 VVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLR 175

Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            + D    P+ + YT+++ G+   G   EA ++FREM   G+ P++ +++  +D+LC+ G
Sbjct: 176 QMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHG 235

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           +   A ++F  M   G  PN +T+  L+  +        ++  +N MK  G  A+ + + 
Sbjct: 236 RSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFT 295

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LID + K G +++A+ +L+ M  +G +P+  T++ +   + ++G +  A   + +M   
Sbjct: 296 ILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGT 355

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-EPNVNTYRILITMYCGMGHWNN 480
             +PNTV Y+ L+Q F T        +L  EM  N +  PN+  +  ++   C  G   +
Sbjct: 356 GVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMD 415

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           A+ +I +++++   +    ++  ++      G++ K   +++ M+  G
Sbjct: 416 AH-HIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAG 462



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 188/418 (44%), Gaps = 40/418 (9%)

Query: 146 HSPDLYHEMINLAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H P++    I L G   +  F     F + MK   +      F+IL+  Y + G+  EA+
Sbjct: 252 HRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAM 311

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
              + M+  G +PD   +S +IS LCR  R ++A   F+ +     +P+ +VY +L++G+
Sbjct: 312 LILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGF 371

Query: 263 CRAGNISEAERVFREMKMAGI-QPNVYTYSIVIDALCRCGQITRAHDVFA---------- 311
           C  G++ +A+ +  EM   GI +PN+  ++ ++ ++C+ G++  AH +F           
Sbjct: 372 CTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSD 431

Query: 312 -------------------------EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
                                     M+  G  P++ T+N L+  + K+ R +  L ++ 
Sbjct: 432 IIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFR 491

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +M     +  T+TYN ++D   + G+   A K+L+ M+  G   +  T+N+I + + +  
Sbjct: 492 EMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNN 551

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
             + A  M+ K+  +  + N  T N ++    T +  +    L   + ++ + PN +TY 
Sbjct: 552 CTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYG 611

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           I+I      G    A      M +  C  P S +    ++ L   G++ K    + K+
Sbjct: 612 IMIRNLLKEGSVEEADNMFSSMEKSGC-APCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 4/247 (1%)

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P ++TY +V++  CR  +       F  +L  G + +    N +++      RT+  ++V
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 345 -YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNASTFNMIFRC 401
              +M  LGC  D  +Y  ++   C D + + A+ +L  M ++   C+P+  T+N +   
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             K G +  A  +Y +M      P+ VT+N ++     +++ D    L ++M +N V PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             TY  +I  Y  +G W  A K  REM   + L P    +   +  L + G+ ++  E+ 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREM-TGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 522 EKMVDRG 528
             M  +G
Sbjct: 245 YSMAAKG 251



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 18/286 (6%)

Query: 124 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 183
           +GIP   + +FFN +      VHS       I   G+V     A H  DL+K       +
Sbjct: 390 NGIPRPNI-AFFNSI------VHS-------ICKEGRVMD---AHHIFDLVKDIGERSDI 432

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
             F+ L+  Y   G   +A    + M   G  PD   ++ +++   +  R  +  + F  
Sbjct: 433 IMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFRE 492

Query: 244 LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + DK  +P  + Y  ++ G  RAG    A+++  EM   G   ++ TY+I++  LCR   
Sbjct: 493 MSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNC 552

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
              A  +F ++  +  + N  T N ++       R E+   +++ +   G   +  TY  
Sbjct: 553 TDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGI 612

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           +I    K+G +E+A  + +SM + GC P +   N   R + + G++
Sbjct: 613 MIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEI 658



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 74/352 (21%)

Query: 250 PDVIVYTNLVRGWCRA----------GNI-------------------------SEAERV 274
           P +  Y  ++ G CRA          G +                          +A +V
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 275 -FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML--EVGCEPNSITFNNLMRV 331
             R M   G  P+ ++Y+IV+  LC   +  +A D+   M   E  C P+ +T+N ++  
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K  +  K   +Y++M + G   D +T+N +I+  CK   +++A  +L  MV  G  PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMK---------------DLKCE------------ 424
             T+  +    S LG    A +M+ +M                D  C+            
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 425 --------PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
                   PN VTY IL+  +AT      ++     M+ + +  N   + ILI  Y   G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + A   + EM + + L P    Y  ++  L R G+L    +   +M+  G
Sbjct: 306 MMDEAMLILSEM-QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 176/388 (45%), Gaps = 37/388 (9%)

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           N+   V +F+++++   + GL   A+  F  M    C PD   +  ++  LC++ R  EA
Sbjct: 183 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 242

Query: 238 QSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
               D ++ +   P  + +  L+ G C+ G++    ++   M + G  PN  TY+ +I+ 
Sbjct: 243 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 302

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT------------------ 338
           LC  G++ +A  +   M+   C PN +T+  L+   VK  R+                  
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 362

Query: 339 -----------------EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
                            E+ + ++ +M   GC+ + + Y+ LID  C++GKL++A ++L 
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 422

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            MV KGC PNA T++ + +   K G+   A R++ +M    C PN + Y++L+       
Sbjct: 423 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 482

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI-EEKCLKPGSSV 500
                + +   M    + P+V  Y  +I   C  G      K   EM+ +E   +P    
Sbjct: 483 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 542

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y ++L+ L +   +    +L+  M+DRG
Sbjct: 543 YNILLRALCKQNSISHAIDLLNSMLDRG 570



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 207/453 (45%), Gaps = 24/453 (5%)

Query: 88  DFTIPSLSLGFSQISTA----------HSISPSTVRHVIEKSCGVRHGIPLLQVLSF-FN 136
           DF +  LS G +  S+A           SIS    R V+  S         LQ  ++ F 
Sbjct: 15  DFGLTRLSSGAALFSSAIPFLLLLLLKLSISECPPRRVVSVS------RSFLQSETYIFK 68

Query: 137 WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA 196
             +    +      ++ +I        F   +   D MK          F ++ R Y +A
Sbjct: 69  SASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKA 128

Query: 197 GLAAEAVHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFD---SLKDKFEPDV 252
            L  +A+  F RM +E+ C     +F+ V++++ ++     A  F++     K    P+V
Sbjct: 129 HLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNV 188

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + +  +++  C+ G +  A  VFREM +   +P+V+TY  ++D LC+  +I  A  +  E
Sbjct: 189 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 248

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   GC P+S+TFN L+    K     +V ++ + M   GC  + +TYN +I+  C  GK
Sbjct: 249 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 308

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG-DVNGAHRMYGKMKDLKCEPNTVTYN 431
           L+ A+ +L+ MV   C PN  T+  +   + K G  V+G H +   +++     N   Y+
Sbjct: 309 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVH-LLSSLEERGHHANEYAYS 367

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            L+      + ++  + L K+M E   +PN+  Y  LI   C  G  + A + + EM+ +
Sbjct: 368 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 427

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            C  P +  Y  +++   + G  QK   + ++M
Sbjct: 428 GC-TPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 3/287 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN      + D A   +D M +        T+  L+   V+ G + + VH  + +E
Sbjct: 296 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 355

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E G   ++ A+S +IS L ++ ++ EA   +  + +K  +P+++VY+ L+ G CR G + 
Sbjct: 356 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 415

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ +  EM   G  PN +TYS +I    + G   +A  V+ EM +  C PN I ++ L+
Sbjct: 416 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 475

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV--RKG 387
               +  +  + + ++  M   G   D + Y+ +I   C  G +E  +K+ N M+     
Sbjct: 476 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 535

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
             P+  T+N++ R + K   ++ A  +   M D  C P+ +T NI +
Sbjct: 536 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFL 582



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 128/254 (50%), Gaps = 21/254 (8%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   +  + D A   +  M ++       T+S L++ + + G + +A+  +  M
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            +  C P++I +S++I  LC   +  EA   +  +  +   PDV+ Y++++ G C AG++
Sbjct: 460 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 519

Query: 269 SEAERVFREM--KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
               ++F EM  + +  QP+V TY+I++ ALC+   I+ A D+   ML+ GC P+ IT N
Sbjct: 520 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCN 579

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY--NFLIDCHCKDGKLEDAIKVLNSMV 384
               + + A R           ++L    D   +    ++  H K  ++  A K++  M+
Sbjct: 580 ----IFLNALR-----------EKLNPPQDGREFLDELVVRLH-KRQRIVGAAKIIEVML 623

Query: 385 RKGCNPNASTFNMI 398
           +K   PNAST+  I
Sbjct: 624 QKFLPPNASTWERI 637



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 27/165 (16%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM--EEYGCAP 216
           GK+R+  + W     M  R +   V  +S ++     AG     +  FN M  +E    P
Sbjct: 482 GKLREAMMMWTH---MLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI---VYTNLVRGWC--------- 263
           D + ++I++  LC++   S A    +S+ D+   PD+I   ++ N +R            
Sbjct: 539 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREF 598

Query: 264 ---------RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
                    +   I  A ++   M    + PN  T+  +I  LC+
Sbjct: 599 LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643


>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Cucumis sativus]
          Length = 576

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 202/421 (47%), Gaps = 4/421 (0%)

Query: 110 STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF-DLAW 168
           ST   +I  +  +R       ++    W+  +  F     +Y+ +++  G+   + D+  
Sbjct: 117 STWDDIISVAVQLRLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVES 176

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
            +++L++S  +  T DT+++L++ Y ++GL  +A   F  M +YG +P  I ++  I  L
Sbjct: 177 TYLELLESHCIP-TEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGL 235

Query: 229 CRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            +     +A   F  +K D  +P    YT L+  + +      A+ +F EM+    +PN+
Sbjct: 236 VKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNI 295

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            T++ +++AL R G   +A ++F +M E G EP+   +N LM  + +A       ++++ 
Sbjct: 296 CTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSL 355

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M+ +GCE D  +YN ++D + + G  EDA  V   M R G  P   +  ++    S  G+
Sbjct: 356 MQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGN 415

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V     + G+M     +P+T   N ++ ++        +  L   M++     +++TY I
Sbjct: 416 VAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNI 475

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           LI +Y G   +    + + +++  K L+P    +   +    R    ++  EL EKM+D 
Sbjct: 476 LINVY-GRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDA 534

Query: 528 G 528
           G
Sbjct: 535 G 535



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 151/311 (48%), Gaps = 1/311 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           + D Y  +IN+ GK  +  +A +  D M+++  +  + TF+ LV    R GL  +A   F
Sbjct: 259 TTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIF 318

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
            +M+E G  PD  A++ ++    R      A   F  ++    EPD   Y  +V  + RA
Sbjct: 319 EQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 378

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G   +A+ VF EMK  GI P + ++ +++ A    G + +  D+  +M + G +P++   
Sbjct: 379 GLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVM 438

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N+++ ++ +  +  K+  +++ M++  C AD  TYN LI+ + + G +E   ++   +  
Sbjct: 439 NSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPA 498

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           K   P+  T+       S+         ++ KM D  C P+  T  +L+   ++ +  + 
Sbjct: 499 KNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQ 558

Query: 446 VLKLKKEMEEN 456
           V  + + M ++
Sbjct: 559 VTNVVRTMHKD 569



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 1/174 (0%)

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D I YN L+D + +    +D       ++   C P   T+ ++ +   K G +  A  ++
Sbjct: 154 DVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVF 213

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +M+     P+ + YN  +       +    +++   M+ +  +P  +TY +LI +Y   
Sbjct: 214 AEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKE 273

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              + A     EM  ++C KP    +  ++  L R G  +K EE+ E+M + G+
Sbjct: 274 SKSHMAQNIFDEMRTQRC-KPNICTFTALVNALAREGLCEKAEEIFEQMQEAGY 326


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 184/377 (48%), Gaps = 2/377 (0%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           R    H+   Y+ +IN   +  Q  LA   +  M     E ++ T S L+  Y      +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +AV   ++M E G  PD I F+ +I  L    +ASEA +  D +  +  +P+++ Y  +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
            G C+ G+I  A  +  +M+ A I+ NV  YS VID+LC+      A ++F EM   G  
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           PN IT+++L+       R     ++ + M       + +T+N LID   K+GKL +A K+
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
            + M+++  +P+  T++ +         ++ A  M+  M    C PN VTYN L+  F  
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           +K  D  ++L +EM +  +  N  TY  LI  +      +NA    ++M+ +  + P   
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIM 471

Query: 500 VYEMVLQQLRRAGQLQK 516
            Y  +L  L + G+L+K
Sbjct: 472 TYNTLLDGLCKNGKLEK 488



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 178/355 (50%), Gaps = 2/355 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M          TF+ L+        A+EAV   +RM + GC P+ + + +V++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC++     A +  + ++  K E +V++Y+ ++   C+  +  +A  +F EM+  G++P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TYS +I  LC   + + A  + ++M+E    PN +TFN L+   VK  +  +  ++Y
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M +   + D  TY+ LI+  C   +L++A  +   M+ K C PN  T+N +     K 
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             ++    ++ +M       NTVTY  L+  F  ++  D    + K+M  + V PN+ TY
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
             L+   C  G    A   + E ++   ++P    Y ++++ + +AG+++   +L
Sbjct: 474 NTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 204/456 (44%), Gaps = 13/456 (2%)

Query: 76  NPSSNSNPSLNPDFTIPSLSL-GFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSF 134
           N     NP + P     S+ L G      A S      R ++       H + L   +  
Sbjct: 20  NLQGKGNPRIAP----SSIDLCGMCYWGRAFSSGSGDYREILRNGL---HSMKLDDAIGL 72

Query: 135 FN-WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           F   V +RP  + S   ++++++   K+++FDL     + M+   +   + T++IL+  +
Sbjct: 73  FGGMVKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
            R    + A+    +M + G  P  +  S +++  C  +R S+A +  D + +  + PD 
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           I +T L+ G       SEA  +   M   G QPN+ TY +V++ LC+ G I  A ++  +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M     E N + ++ ++    K    +  L ++ +M+  G   + ITY+ LI C C   +
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
             DA ++L+ M+ +  NPN  TFN +     K G +  A ++Y +M     +P+  TY+ 
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+  F      D    + + M   +  PNV TY  LI  +C     +   +  REM  ++
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM-SQR 429

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            L   +  Y  ++    +A      + + ++MV  G
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 175/347 (50%), Gaps = 3/347 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+L  Y  ++N   K    DLA++ ++ M++  +E  V  +S ++    +     +A++ 
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           F  ME  G  P+ I +S +IS LC   R S+A     D ++ K  P+V+ +  L+  + +
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EAE+++ EM    I P+++TYS +I+  C   ++  A  +F  M+   C PN +T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    KA R ++ ++++ +M + G   +T+TY  LI    +    ++A  V   MV
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G +PN  T+N +   + K G +  A  ++  ++  K EP   TYNI+++    +   +
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
               L   +    V+P+V  Y  +I+ +C  G    A    R+M E+
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 191/420 (45%), Gaps = 7/420 (1%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T+  +I   C + H +    VL     +   P  V    L + +       R    A  F
Sbjct: 108 TLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVAR----AARF 163

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK-IAFSIVISILC 229
            D ++    +    T+  ++    +AG  + A+    +++   C  D  IA+S ++  LC
Sbjct: 164 ADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLC 223

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +     EA + F  +  K  +PD++ Y +L+ G C  G   EA  +   M   GI PNV 
Sbjct: 224 KDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQ 283

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T+++++D  C+ G I+RA  +   M+ VG EP+ +T+N+++  H   S+    ++V+  M
Sbjct: 284 TFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELM 343

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              G   + +TY+ LI   CK   +  A+ +L  MV  G NP+  T++ +     K G  
Sbjct: 344 IHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKP 403

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A  ++  M +    PN  T  I++      +     + L +EME+  +E NV  Y I+
Sbjct: 404 EAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIV 463

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C  G  N+A + +   +  K +K     Y  +++ L + G L   E L+ KM + G
Sbjct: 464 LDGMCSFGKLNDAQE-LFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENG 522



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 184/368 (50%), Gaps = 16/368 (4%)

Query: 130 QVLSFFNWVTAR---PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
           + L+ F+ +T++   P+ V    L H + N  G+ ++   A   +  M  + +   V TF
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNF-GRWKE---ATTLLGNMMRKGIMPNVQTF 285

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
           ++LV  + + G+ + A      M   G  PD + ++ VIS  C   +  +A   F+ +  
Sbjct: 286 NVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIH 345

Query: 247 K-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           K F P+++ Y++L+ GWC+  NI++A  +  EM  +G+ P+V T+S +I   C+ G+   
Sbjct: 346 KGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEA 405

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A ++F  M E    PN  T   ++    K     + + ++ +M+++  E + + YN ++D
Sbjct: 406 AKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLD 465

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C  GKL DA ++ + +  KG   +   +  + + + K G ++ A  +  KM++  C P
Sbjct: 466 GMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLP 525

Query: 426 NTVTYNI----LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
           N  TYN+    L+Q +  S+ST  +L +K +     +  +  T  +LI+ +      +  
Sbjct: 526 NEFTYNVFVRGLLQRYDISRSTKYLLLMKGK----GLSADATTTELLISYFSANKENSAL 581

Query: 482 YKYIREMI 489
           + +++E +
Sbjct: 582 HVFLQEFV 589



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 180/383 (46%), Gaps = 3/383 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEI-TVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  +IN   K      A  +++ +K RN ++  V  +S ++    + G+  EA++ F+ M
Sbjct: 179 YGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGM 238

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
              G  PD +A++ +I  LC   R  EA +   ++  K   P+V  +  LV  +C+ G I
Sbjct: 239 TSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMI 298

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           S A+ +   M   G++P+V TY+ VI   C   Q+  A  VF  M+  G  PN +T+++L
Sbjct: 299 SRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSL 358

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K     K L +  +M   G   D +T++ LI   CK GK E A ++  +M     
Sbjct: 359 IHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQ 418

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +PN  T  +I   + K    + A  ++ +M+ +  E N V YNI++    +    +   +
Sbjct: 419 HPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQE 478

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L   +    ++ +V  Y  +I   C  G  ++A   + +M E  CL P    Y + ++ L
Sbjct: 479 LFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCL-PNEFTYNVFVRGL 537

Query: 509 RRAGQLQKHEELVEKMVDRGFTA 531
            +   + +  + +  M  +G +A
Sbjct: 538 LQRYDISRSTKYLLLMKGKGLSA 560



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 152/341 (44%), Gaps = 3/341 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
           F+ L    V+    A  +     +   G  PD    +I+I+ LC         S    + 
Sbjct: 74  FTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMF 133

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           K   +P V+ +  L+ G C  GN++ A R    ++  G Q N YTY  +I+ LC+ G  +
Sbjct: 134 KIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTS 193

Query: 305 RAHDVFAEMLEVGCEPN-SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            A     ++    C+ +  I ++ +M    K     + L +++ M   G + D + YN L
Sbjct: 194 GAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSL 253

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C  G+ ++A  +L +M+RKG  PN  TFN++     K G ++ A  + G M  +  
Sbjct: 254 IHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGV 313

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           EP+ VTYN ++            +K+ + M      PN+ TY  LI  +C   + N A  
Sbjct: 314 EPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALF 373

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            + EM+    L P    +  ++    +AG+ +  +EL   M
Sbjct: 374 LLGEMVNSG-LNPDVVTWSTLIGGFCKAGKPEAAKELFCTM 413



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 144/331 (43%), Gaps = 5/331 (1%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVR 260
           A+  F++M      P +  F+ +  I+ + +  +   S    +     +PDV   T ++ 
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE-VGCE 319
             C   +      V   M   G+ P V T++ +I+ LC  G + RA   FA+ LE +G +
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAAR-FADSLEDMGHQ 173

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD-TITYNFLIDCHCKDGKLEDAIK 378
            NS T+  ++    KA  T   +    ++K   C+ D  I Y+ ++D  CKDG + +A+ 
Sbjct: 174 SNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALN 233

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           + + M  KG  P+   +N +   +   G    A  + G M      PN  T+N+L+  F 
Sbjct: 234 LFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFC 293

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
                     +   M    VEP+V TY  +I+ +C +    +A K    MI +  L P  
Sbjct: 294 KDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFL-PNL 352

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             Y  ++    +   + K   L+ +MV+ G 
Sbjct: 353 VTYSSLIHGWCKTKNINKALFLLGEMVNSGL 383


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 188/403 (46%), Gaps = 37/403 (9%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q + A HF D + ++ ++    ++  L+    + G    A+    +++     P+   ++
Sbjct: 144 QVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYN 203

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC+ +  SEA   F  +  K    DV+ YT L+ G+C A  + EA  +  EM + 
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            I PNVYTY+I++DALC+ G++  A +V A ML+   +P+ IT++ LM  +      +K 
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKA 323

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
             V+N M  +G   D  +Y  LI+  CK+  +++A+ +   M +K   P   T++ +   
Sbjct: 324 QHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K G ++    +  +M+D     N +TYN L+     +   D  + L  +M++  + P 
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443

Query: 462 VNTYRILITMYCGMGHWNNA----------------YKY-------------------IR 486
             T+ IL+   C  G   +A                YKY                   + 
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLS 503

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +M E  C+ P +  +++++  L +  +  K E+L+ +M+ RG 
Sbjct: 504 KMEENGCV-PNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 189/391 (48%), Gaps = 6/391 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H+P +  ++++++   K++ +  A      ++ + ++  + T +IL+  +   G      
Sbjct: 55  HTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
               ++ + G  P  I F+ +I  LC K + ++A  F D  L    + D + Y  L+ G 
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ G+   A ++ R++     +PNV  Y+ +IDALC+   ++ A+ +F+EM   G   + 
Sbjct: 175 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+  L+     AS+ ++ + + N+M       +  TYN L+D  CK+GK+++A  VL  
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M++    P+  T++ +      + ++  A  ++  M  +   P+  +Y IL+  F  +K 
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKM 354

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            D  L L KEM +  + P + TY  LI   C  G  +  +  I EM  ++ +      Y 
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM-RDRGIPANVITYN 413

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
            ++  L + G L +   L  KM D+G   RP
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGI--RP 442



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 170/342 (49%), Gaps = 1/342 (0%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           ++Y+ +I+   K +    A+     M ++ +   V T++ L+  +  A    EA+   N 
Sbjct: 200 EMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNE 259

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGN 267
           M      P+   ++I++  LC++ +  EA++     LK   +PDVI Y+ L+ G+     
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYE 319

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A+ VF  M + G+ P+V++Y+I+I+  C+   +  A ++F EM +    P  +T+++
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K+ R   V  + ++M+  G  A+ ITYN LID  CK+G L+ AI + N M  +G
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P + TF ++   + K G +  A   +  +       +   YN+++         +  L
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEAL 499

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
            +  +MEEN   PN  T+ I+I         + A K +R+MI
Sbjct: 500 TMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMI 541



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 164/373 (43%), Gaps = 49/373 (13%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +AV  FNRM      P  I F+ ++    + +  S A S    L+ K  +PD+I    L+
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             +C  G I+    V  ++   G QP+  T++ +I  LC  GQ+ +A     ++L  G +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK---------- 369
            + +++  L+    K   T   +++  ++     + +   YN +ID  CK          
Sbjct: 162 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL 221

Query: 370 -------------------------DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
                                      KL++AI +LN MV K  NPN  T+N++   + K
Sbjct: 222 FSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK------EMEENEV 458
            G V  A  +   M     +P+ +TY+ LM  +       +V +LKK       M    V
Sbjct: 282 EGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF------LVYELKKAQHVFNAMSLMGV 335

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+V++Y ILI  +C     + A    +EM  +K + PG   Y  ++  L ++G++    
Sbjct: 336 TPDVHSYTILINGFCKNKMVDEALNLFKEM-HQKNMVPGIVTYSSLIDGLCKSGRISYVW 394

Query: 519 ELVEKMVDRGFTA 531
           +L+++M DRG  A
Sbjct: 395 DLIDEMRDRGIPA 407



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 128/243 (52%), Gaps = 3/243 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y  +++    V +   A H  + M    V   V +++IL+  + +  +  EA++ 
Sbjct: 302 PDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNL 361

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCR 264
           F  M +    P  + +S +I  LC+  R S      D ++D+  P +VI Y +L+ G C+
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCK 421

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++  A  +F +MK  GI+P  +T++I++D LC+ G++  A + F ++L  G   +   
Sbjct: 422 NGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYK 481

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++  H K    E+ L + ++M+  GC  + +T++ +I+   K  + + A K+L  M+
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMI 541

Query: 385 RKG 387
            +G
Sbjct: 542 CRG 544


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 173/348 (49%), Gaps = 3/348 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F D+ +SR +   VD FS L+    +       +  F  +E  G + D  +FS +I   C
Sbjct: 61  FCDMAESRPLPSIVD-FSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFC 119

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           R  R S A S    + K  FEP ++ + +LV G+C    I EA  +  ++   G +PNV 
Sbjct: 120 RCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVV 179

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ +ID+LC   Q+  A DV   M ++G  P+ IT+N+L+     + +     ++ + M
Sbjct: 180 IYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDM 239

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            R+G   D IT++ +ID   K+G+L +A K  + M+++  +PN  T+N +   +   G +
Sbjct: 240 MRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLL 299

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A ++   M      PN VTYN L+  +  SK  D  +K+   M  + V+ +  TY  L
Sbjct: 300 DEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTL 359

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
              YC  G +N A K +  M+    L P    + M+L  L   G+++K
Sbjct: 360 YQGYCQAGQFNAAEKVLARMVSCGVL-PDIYTFNMLLDGLCEHGKIEK 406



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 178/381 (46%), Gaps = 4/381 (1%)

Query: 147 SPDLYH--EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           S DLY    +I+   +  +  LA   +  M     E ++ TF  LV  +       EA+ 
Sbjct: 105 SHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMS 164

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
             +++   G  P+ + ++ +I  LC  R+   A    + + K    PDVI Y +L+    
Sbjct: 165 LVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLF 224

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            +G    + R+  +M   GI P+V T+S +ID   + GQ+  A   + EM++   +PN +
Sbjct: 225 HSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIV 284

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N+L+         ++  +V N M   G   + +TYN L++ +CK  +++DA+K+L  M
Sbjct: 285 TYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVM 344

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              G + +  T+N +++   + G  N A ++  +M      P+  T+N+L+         
Sbjct: 345 SHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKI 404

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  L   ++++++E    + TY I+I   C      +A+ Y+   +  K + P    Y  
Sbjct: 405 EKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAW-YLFCSLALKGVSPDVITYTT 463

Query: 504 VLQQLRRAGQLQKHEELVEKM 524
           ++  LRR     +  EL  KM
Sbjct: 464 MMIGLRRKRLWLEAHELYRKM 484



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 108/225 (48%), Gaps = 5/225 (2%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +F +M E    P+ + F+ L+    K  + E V+ ++  ++ LG   D  +++ LID
Sbjct: 57  ALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID 116

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
           C C+  +L  A+  L  M++ G  P+  TF  +      +  +  A  +  ++  L  EP
Sbjct: 117 CFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEP 176

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N V YN ++     ++  D  L +   ME+  + P+V TY  LIT     G W  + + +
Sbjct: 177 NVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL 236

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQL----QKHEELVEKMVD 526
            +M+    + P    +  ++    + GQL    ++++E++++ VD
Sbjct: 237 SDMMRMG-IHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/290 (21%), Positives = 124/290 (42%), Gaps = 36/290 (12%)

Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           F D  + +  P ++ ++ L+    +         +FR +++ GI  ++Y++S +ID  CR
Sbjct: 61  FCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCR 120

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
           C                                   SR    L    +M +LG E   +T
Sbjct: 121 C-----------------------------------SRLSLALSCLGKMMKLGFEPSIVT 145

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +  L++  C   ++++A+ +++ +V  G  PN   +N I   + +   V+ A  +   M+
Sbjct: 146 FGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHME 205

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
            +   P+ +TYN L+     S    +  ++  +M    + P+V T+  +I ++   G   
Sbjct: 206 KMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLL 265

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            A K   EMI ++ + P    Y  ++  L   G L + ++++  MV +GF
Sbjct: 266 EAKKQYDEMI-QRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGF 314



 Score = 45.8 bits (107), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 2/125 (1%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           QF+ A   +  M S  V   + TF++L+      G   +A+     +++       I ++
Sbjct: 368 QFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYN 427

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM- 280
           I+I  +C+  +  +A   F SL  K   PDVI YT ++ G  R     EA  ++R+MK  
Sbjct: 428 IIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKD 487

Query: 281 AGIQP 285
            G+ P
Sbjct: 488 DGLMP 492


>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
          Length = 579

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 180/399 (45%), Gaps = 7/399 (1%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI-DLMKSRNVEITVDTFS 187
           L  L FF +    P F H PD    + N     R F L    + DL  S    ++   F 
Sbjct: 103 LPSLRFFLFAGELPGFSHHPDSLLVLANSLAGARLFPLLRSLLSDLPPS---ALSRGLFP 159

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           +L R Y RA L  +A+ AF+ M  +G  P    F  ++  L R       + FF     +
Sbjct: 160 LLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESTAQ 219

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           F+     YT L+ GW        A  +F EM   G++ +V+ Y+ +IDALCR G IT A 
Sbjct: 220 FDVSAKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGGDITSAQ 279

Query: 308 DVFAEMLEV-GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           +  + M +  G  PN+ T+   +     +      L+V ++M       +  TYN +I  
Sbjct: 280 EQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRL 339

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C  G++ +A  +L+ +  +G  P+  ++N +     KL +VN A R+  +M    C P+
Sbjct: 340 LCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPD 399

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI-TMYCGMGHWNNAYKYI 485
             +YN+L++M  +    D  +++   ME+    P   TY ++I  +    G   +A  Y 
Sbjct: 400 RHSYNMLLKMLISVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYF 459

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             M++E  + P  +  E++  +L   G   +   L ++M
Sbjct: 460 VRMVDEG-IPPYQATCEVLRDRLLMLGLRDQLGVLTDRM 497



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 9/280 (3%)

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE- 312
           ++  L R + RA    +A R F  M   G  P +  +  ++ AL R G +      F E 
Sbjct: 157 LFPLLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRES 216

Query: 313 --MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
               +V  +  +I  +    V     + E    ++++M + G E D   YN LID  C+ 
Sbjct: 217 TAQFDVSAKAYTILISGWAVV----KKPENARSLFDEMVKRGVELDVHVYNALIDALCRG 272

Query: 371 GKLEDAIKVLNSMVRK-GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           G +  A + L++M +  G  PNA+T+           DV  A R+  +M      PN  T
Sbjct: 273 GDITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFT 332

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           YN ++++       +    +  E+     +P+V +Y  L+  +C +   N A + I  M 
Sbjct: 333 YNAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMD 392

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +E C  P    Y M+L+ L   G+     E+ + M  RGF
Sbjct: 393 KELC-PPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKRGF 431


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 193/446 (43%), Gaps = 52/446 (11%)

Query: 137 WVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA 196
           WV  + + + +    + +++   K  +FD  W     M +R     V T+  L+    R 
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 197 GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVY 255
           G   +A   F+ M E    P  + ++I+I  LC + R SEA+S F ++++    P++  Y
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
             ++ G+C+  ++ +A  +++EM   G+ PNV T+ I+ID LC+  ++  A     +M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 316 VGCEPNSITFNNLMRVHVKAS-----------------------------------RTEK 340
            G  PN   +N L+  + KA                                    R E+
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
              +  +MK+ G   + +TYN LID +CK+G +E AI+V + M  KG  PN  TF+ +  
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
              K G +  A  +Y +M      P+ V Y  L+       +T    +L KEM+E  + P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 461 NVNTYRILITMYCGMGHWNNAYKYI-------------REMIEEKCLKPGSSVYEMVLQQ 507
           NV T   LI   C  G  ++A K                E+    C  P   +Y  ++Q 
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC-SPNHVMYTALIQG 565

Query: 508 LRRAGQLQKHEELVEKMVDRGFTARP 533
           L   G++ K  +    M   G   RP
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGL--RP 589



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 201/454 (44%), Gaps = 55/454 (12%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF--------DLAWHFIDLMKSR---- 177
           Q L  F+ V+ R +   +P LY  +I++    + +        DL     +  +SR    
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111

Query: 178 --NV-------EITVDTFSILVRRYVRAGLAAEAVHAFNRME------------------ 210
             NV       + T + F +L+  +   GL  EA+  + +M+                  
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK 171

Query: 211 --------------EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVY 255
                           G +P+ + +  +I   CR+    +A   FD + + K  P V++Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 256 TNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE 315
           T L+RG C    ISEAE +FR M+ +G+ PN+YTY+ ++D  C+   + +A +++ EML 
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLG 291

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G  PN +TF  L+    K        +    M   G   +   YN LID +CK G L +
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A+ + + + +    P+  T++++ + +  +  +  A  +  +MK     PN VTYN L+ 
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            +    + +  +++  +M E  +EPN+ T+  LI  YC  G    A     EM+  K L 
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV-IKGLL 470

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           P    Y  ++    + G  ++   L ++M + G 
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 164/331 (49%), Gaps = 14/331 (4%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  F+  M S  V   +  ++ L+  Y +AG  +EA+   + +E++   PD   +SI+I 
Sbjct: 317 ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIK 376

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   R  EA      +K K F P+ + Y  L+ G+C+ GN+ +A  V  +M   GI+P
Sbjct: 377 GLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP 436

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N+ T+S +ID  C+ G++  A  ++ EM+  G  P+ + +  L+  H K   T++  +++
Sbjct: 437 NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLH 496

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL-------------NSMVRKGCNPNA 392
            +M+  G   +  T + LID  CKDG++ DAIK+              N + R  C+PN 
Sbjct: 497 KEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH 556

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
             +  + + +   G +  A + +  M+     P+  T  +++Q    +     V+ L+ +
Sbjct: 557 VMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQAD 616

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           + +  + PN + YR+L   Y   G+  +A +
Sbjct: 617 ILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 51/282 (18%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++   I + G   V + + A   +  MK +       T++ L+  Y + G   +A+  
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            ++M E G  P+ I FS +I   C+  +   A   +  +  K   PDV+ YT L+ G  +
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALC-------------------------- 298
            GN  EA R+ +EM+ AG+ PNV+T S +ID LC                          
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 299 ----------------------RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
                                   G+I +A   F++M   G  P+  T   +++ H +A 
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAM 605

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
               V+ +   + ++G   ++  Y  L   + + G L+ A++
Sbjct: 606 HLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 14/216 (6%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +I+   K  + + A      M  + +   V  ++ L+  + + G   EA      M+
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF------DSLKDKF--------EPDVIVYT 256
           E G  P+    S +I  LC+  R S+A   F      D+   K          P+ ++YT
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L++G C  G I +A + F +M+ +G++P+V+T  ++I    R   +     + A++L++
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           G  PNS  +  L + + ++   +  L+    +  +G
Sbjct: 621 GIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIG 656


>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 516

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 181/378 (47%), Gaps = 8/378 (2%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE---ITVDTFS 187
             +FF W   +P + HS   YH MI++ GK+R+FD AW+ I+ M+        +T  T  
Sbjct: 79  AFTFFLWAGKQPGYAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLL 138

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           I++R+Y      A A++ F   +++        F  ++S LCR +   +A+      K+ 
Sbjct: 139 IMIRKYCAVHDVARAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNL 198

Query: 248 FEPDVIVYTNLVRGWCR-AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           F  D   +  ++ GWC    + S AER++ EM    IQ +V +Y  +I    +  ++ + 
Sbjct: 199 FPLDTKSFNIILNGWCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKV 258

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +F EM +    P+   +N ++    K    ++ + +   ++      + +TYN LI  
Sbjct: 259 LRMFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKP 318

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK GK+++A ++   ++++  +P   TF+  FR +    +V     +  KMK+L C P 
Sbjct: 319 LCKAGKVDEAKQLFYEILKRHLSPTIQTFHAFFRILRTKEEV---FELLDKMKELGCYPT 375

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             TY +LM+ F   +  D V K+   M E+ +  + ++Y +LI      G    A+ Y  
Sbjct: 376 IETYIMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYA 435

Query: 487 EMIEEKCLKPGSSVYEMV 504
           EM +EK   P     EM+
Sbjct: 436 EM-QEKGFLPEPKTEEML 452



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 159/363 (43%), Gaps = 30/363 (8%)

Query: 107 ISPSTVRHVIEKSCGVR---HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ 163
           ++P T+  +I K C V      I        FN+     EF       H +++   + + 
Sbjct: 132 VTPQTLLIMIRKYCAVHDVARAINTFYAYKQFNFQVGLEEF-------HSLLSALCRYKN 184

Query: 164 FDLAWHFIDLMKSRNV-EITVDTFSILVRRYVRAGLAAEAVHA---FNRMEEYGCAPDKI 219
              A H   L  ++N+  +   +F+I++  +    L     HA   ++ M +     D +
Sbjct: 185 VQDAEHL--LFCNKNLFPLDTKSFNIILNGW--CNLIVSTSHAERIWHEMSKRRIQHDVV 240

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
           ++  +IS   +  +  +    FD +K  K  PD  VY  ++    +   + EA  +   +
Sbjct: 241 SYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTL 300

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +   + PNV TY+ +I  LC+ G++  A  +F E+L+    P   TF+   R+       
Sbjct: 301 EDNDVTPNVVTYNSLIKPLCKAGKVDEAKQLFYEILKRHLSPTIQTFHAFFRI---LRTK 357

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           E+V ++ ++MK LGC     TY  L+   C+  +L+D  K+ ++M   G   + S++ ++
Sbjct: 358 EEVFELLDKMKELGCYPTIETYIMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSYIVL 417

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              +   G +  AH  Y +M++    P   T  +L    +  ++T        E +E  +
Sbjct: 418 IHGLFLNGKLEEAHTYYAEMQEKGFLPEPKTEEMLQAWVSGKQAT--------EGQETNL 469

Query: 459 EPN 461
           EPN
Sbjct: 470 EPN 472



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/349 (20%), Positives = 149/349 (42%), Gaps = 43/349 (12%)

Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNL---VRGWCRAGNISEAERVFREMK 279
           +ISIL + R+   A +  + ++  +  P ++    L   +R +C   +++ A   F   K
Sbjct: 102 MISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDVARAINTFYAYK 161

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRA-HDVF--AEMLEVGCEPNSITFNNLMRVHVKAS 336
               Q  +  +  ++ ALCR   +  A H +F    +  +  +  +I  N    + V  S
Sbjct: 162 QFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSFNIILNGWCNLIVSTS 221

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
             E++   +++M +   + D ++Y  +I C+ K  KL   +++ + M ++   P+   +N
Sbjct: 222 HAERI---WHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYN 278

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ--------------------- 435
            +   ++K   V  A  + G ++D    PN VTYN L++                     
Sbjct: 279 AVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGKVDEAKQLFYEILKR 338

Query: 436 -----------MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
                       F   ++ + V +L  +M+E    P + TY +L+  +C     ++ +K 
Sbjct: 339 HLSPTIQTFHAFFRILRTKEEVFELLDKMKELGCYPTIETYIMLMRKFCRWRQLDDVFK- 397

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           + + + E  +    S Y +++  L   G+L++      +M ++GF   P
Sbjct: 398 MWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQEKGFLPEP 446


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 148/308 (48%), Gaps = 1/308 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDS 243
           T + L+    + G   EAV    +M E G   DKI ++ +IS  C++ +  E      + 
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +K   EPD   Y  L+ G CR G + EA  ++ E K   + PNVYTY ++ID  C+  +I
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                +F E+L    E NS+ +N L+R + +   T +  ++++ M+  G    T TY+ L
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C  G++EDA  +++ M ++G  PN   +  +     KLG ++    +  +M     
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN +TY +++  ++ S       KL  EM    + P+  TY +L   +C  G     +K
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792

Query: 484 YIREMIEE 491
               M +E
Sbjct: 793 ICDYMSQE 800



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 229/527 (43%), Gaps = 27/527 (5%)

Query: 18  IPKAYSFFSSLA-PLNEDDDGDCVTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPN 76
           +PK    F  +A PL       CVT+    P +P  S  +   S+  H+L+K       N
Sbjct: 8   LPKPTPIFCPIARPLT------CVTSAAPHPPSPLPSQNQPPSSD--HALLKSVTSILSN 59

Query: 77  PSSNSNPSLNPDFTIPSLSL-GFSQI--STAHSISPSTVR---HVIEKSCGVRHGI---- 126
           PS +S         IP LS   F  +  S   +++P T     +    SCG R  +    
Sbjct: 60  PSLDSTQCKQ---LIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYC 116

Query: 127 PLLQVLSFFNWVT-ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT 185
            L++ L    +V+ AR   +   D    ++    K R  ++A    DL +     + V  
Sbjct: 117 VLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAA 176

Query: 186 FSILVRRY---VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
             +L+  Y    R      A+  F  +   G  P     + ++S L +     ++   F+
Sbjct: 177 VDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFE 236

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           +++    PDV +++  +  +C+ G + +A ++F +M+  G+ PNV TY+ +I  LC+ G 
Sbjct: 237 TMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGN 296

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +  A     +M++ G     IT++ L+   +K  +  +   V  +    G   + + YN 
Sbjct: 297 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 356

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LID +CK G L DA+++   MV KG NPN+ T N I +   K+G +  A  +  +M    
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
              N   +  ++     +   +  L+  +EM    + PN      L+   C  G  ++A 
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +    ++ EK           ++  L + G +Q+   L++KM++RGF
Sbjct: 477 ELWFRLL-EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 522



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 2/387 (0%)

Query: 139 TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           T    F  +  +Y+ +I+   K+     A      M S+ +     T + +++ + + G 
Sbjct: 342 TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQ 401

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTN 257
             +A      M   G + +  AF+ +I  LC   R   A  F  + L     P+  + T 
Sbjct: 402 MEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 461

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           LV G C+ G  S+A  ++  +   G   N+ T + +I  LC+ G +  A  +  +MLE G
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
              + IT+N L+    K  + E+  ++  +M + G E DT TYN LI   C+ GKL++A+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            + N    +   PN  T+ ++     K   +    +++ ++     E N+V YN L++ +
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             + +T    KL  +M    + P   TY  LI   C +G   +A   I EM +E  L P 
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLL-PN 700

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKM 524
              Y  ++    + GQ+ K   ++++M
Sbjct: 701 VVCYTALIGGYCKLGQMDKVVNVLQEM 727



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 1/293 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           FV     Y+ +I+   K  + +  +     M  + +E    T+++L+    R G   EAV
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGW 262
           + +N  +     P+   + ++I   C+  +  E +  F + L    E + +VY  L+R +
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           CR GN  EA ++  +M+  GI P   TYS +I  +C  G++  A  +  EM + G  PN 
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 701

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           + +  L+  + K  + +KV+ V  +M       + ITY  +ID + K G ++ A K+L+ 
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           MV KG  P+  T+N++     K G +    ++   M       + +TY  L+ 
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVH 814



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/521 (22%), Positives = 213/521 (40%), Gaps = 59/521 (11%)

Query: 50  PFLSPEETLISEKFHSLIKDHHRKNPNPSSNSN------PSLNPDFTIPSLSLGFSQIST 103
           P LSP +      F S+     R+N NP +  N       S    FT+ S  +    +  
Sbjct: 72  PHLSPHQ--FDSVFFSV-----RRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIV 124

Query: 104 AHSISPSTVR--HVIEKSCGVRHGIP------LLQVLSFFNWVTARPEFVHSPDLYHEMI 155
           +  +SP+ +    +I++   V  G P      +   ++  N V      V + DL   + 
Sbjct: 125 SGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVY 184

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
               +   F  A      + ++ V  TV T + L+   V+A    ++   F  M + G +
Sbjct: 185 CTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVS 243

Query: 216 PDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAER- 273
           PD   FS  I+  C+  +  +A Q FFD  K    P+V+ Y NL+ G C+ GN+ EA R 
Sbjct: 244 PDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRF 303

Query: 274 ----------------------------------VFREMKMAGIQPNVYTYSIVIDALCR 299
                                             V +E    G  PN   Y+ +ID  C+
Sbjct: 304 KEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK 363

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
            G +  A  +  +M+  G  PNS+T N++++   K  + E+   +  +M   G   +   
Sbjct: 364 MGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA 423

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           +  +I   C + + E A++ L  M+ +   PN      +   + K G  + A  ++ ++ 
Sbjct: 424 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 483

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +     N VT N L+     + +    ++L K+M E     +  TY  LI+  C  G   
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 543

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
             +K   EM+++  ++P +  Y +++  + R G+L +   L
Sbjct: 544 EGFKLRGEMVKQG-IEPDTFTYNLLIHGMCRIGKLDEAVNL 583



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 2/228 (0%)

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  VF  +   G  P   T   L+   VKA+  EK   V+  M++ G   D   ++  I+
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAIN 254

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK GK+EDAI++   M + G +PN  T+N +   + K G+++ A R   KM       
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
             +TY++L+      +  +    + KE  E    PN   Y  LI  YC MG+  +A + I
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR-I 373

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           R  +  K + P S     ++Q   + GQ+++ E ++E+M+ RGF+  P
Sbjct: 374 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINP 421



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I    K+ Q D   + +  M S ++     T+++++  Y ++G    A    + M 
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNIS 269
             G  PD + ++++ +  C++ +  E     D +  +  P D I YT LV GW +   ++
Sbjct: 764 GKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALT 823

Query: 270 EAE 272
             E
Sbjct: 824 NQE 826


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 176/388 (45%), Gaps = 37/388 (9%)

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           N+   V +F+++++   + GL   A+  F  M    C PD   +  ++  LC++ R  EA
Sbjct: 167 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 226

Query: 238 QSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
               D ++ +   P  + +  L+ G C+ G++    ++   M + G  PN  TY+ +I+ 
Sbjct: 227 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 286

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT------------------ 338
           LC  G++ +A  +   M+   C PN +T+  L+   VK  R+                  
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 346

Query: 339 -----------------EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
                            E+ + ++ +M   GC+ + + Y+ LID  C++GKL++A ++L 
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            MV KGC PNA T++ + +   K G+   A R++ +M    C PN + Y++L+       
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 466

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI-EEKCLKPGSSV 500
                + +   M    + P+V  Y  +I   C  G      K   EM+ +E   +P    
Sbjct: 467 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 526

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           Y ++L+ L +   +    +L+  M+DRG
Sbjct: 527 YNILLRALCKQNSISHAIDLLNSMLDRG 554



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 183/379 (48%), Gaps = 7/379 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM- 209
           ++ +I        F   +   D MK          F ++ R Y +A L  +A+  F RM 
Sbjct: 67  FYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMV 126

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFD---SLKDKFEPDVIVYTNLVRGWCRAG 266
           +E+ C     +F+ V++++ ++     A  F++     K    P+V+ +  +++  C+ G
Sbjct: 127 DEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLG 186

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            +  A  VFREM +   +P+V+TY  ++D LC+  +I  A  +  EM   GC P+S+TFN
Sbjct: 187 LVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFN 246

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    K     +V ++ + M   GC  + +TYN +I+  C  GKL+ A+ +L+ MV  
Sbjct: 247 VLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVAS 306

Query: 387 GCNPNASTFNMIFRCISKLG-DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            C PN  T+  +   + K G  V+G H +   +++     N   Y+ L+      + ++ 
Sbjct: 307 KCVPNDVTYGTLINGLVKQGRSVDGVH-LLSSLEERGHHANEYAYSTLISGLFKEEKSEE 365

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
            + L K+M E   +PN+  Y  LI   C  G  + A + + EM+ + C  P +  Y  ++
Sbjct: 366 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC-TPNAFTYSSLI 424

Query: 506 QQLRRAGQLQKHEELVEKM 524
           +   + G  QK   + ++M
Sbjct: 425 KGFFKTGNSQKAIRVWKEM 443



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 3/287 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN      + D A   +D M +        T+  L+   V+ G + + VH  + +E
Sbjct: 280 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 339

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           E G   ++ A+S +IS L ++ ++ EA   +  + +K  +P+++VY+ L+ G CR G + 
Sbjct: 340 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 399

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ +  EM   G  PN +TYS +I    + G   +A  V+ EM +  C PN I ++ L+
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 459

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV--RKG 387
               +  +  + + ++  M   G   D + Y+ +I   C  G +E  +K+ N M+     
Sbjct: 460 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 519

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
             P+  T+N++ R + K   ++ A  +   M D  C P+ +T NI +
Sbjct: 520 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFL 566



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 128/254 (50%), Gaps = 21/254 (8%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   +  + D A   +  M ++       T+S L++ + + G + +A+  +  M
Sbjct: 384 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 443

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            +  C P++I +S++I  LC   +  EA   +  +  +   PDV+ Y++++ G C AG++
Sbjct: 444 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 503

Query: 269 SEAERVFREM--KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
               ++F EM  + +  QP+V TY+I++ ALC+   I+ A D+   ML+ GC P+ IT N
Sbjct: 504 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCN 563

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY--NFLIDCHCKDGKLEDAIKVLNSMV 384
               + + A R           ++L    D   +    ++  H K  ++  A K++  M+
Sbjct: 564 ----IFLNALR-----------EKLNPPQDGREFLDELVVRLH-KRQRIVGAAKIIEVML 607

Query: 385 RKGCNPNASTFNMI 398
           +K   PNAST+  I
Sbjct: 608 QKFLPPNASTWERI 621



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 27/165 (16%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM--EEYGCAP 216
           GK+R+  + W     M  R +   V  +S ++     AG     +  FN M  +E    P
Sbjct: 466 GKLREAMMMWTH---MLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVI---VYTNLVRGWC--------- 263
           D + ++I++  LC++   S A    +S+ D+   PD+I   ++ N +R            
Sbjct: 523 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREF 582

Query: 264 ---------RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
                    +   I  A ++   M    + PN  T+  +I  LC+
Sbjct: 583 LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 175/349 (50%), Gaps = 2/349 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  ++D+M + ++   + +++ L+  Y R G  AEA+  F+ +      P  + ++ +I 
Sbjct: 331 ARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLID 390

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             CR      A+   D + K    PDV+ +T LVRG+C+ GN+  A+ +F EM   G++P
Sbjct: 391 GGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKP 450

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +   Y+  I    + G  ++A  +  EM   G  P+ IT+N L+    K    +   ++ 
Sbjct: 451 DCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELV 510

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            +M+  G   D +TY  +I  H   G L  A +V + M++KG +P+  T+ ++    +  
Sbjct: 511 QKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVR 570

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G ++ A + + +M+D    PN +TYN L+         D+   L  EME   V PN  TY
Sbjct: 571 GRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTY 630

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            ILI     + +W +A K  ++M++ + +KP S  +  +++ L +  +L
Sbjct: 631 TILINENSNLQYWQDALKLYKDMLDRE-IKPDSCTHSALMKHLSKDYKL 678



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 194/419 (46%), Gaps = 19/419 (4%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWH-----------------FI 171
           L  L FF WV  +P F  S   +  ++++  K      A+                   +
Sbjct: 66  LTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLV 125

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
            +   RN E++V    +L++ + +  +  + +  F +M   G  PD    + V+ +L  K
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDK 185

Query: 232 RRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
              +E +  +  + K +  P ++ +  ++   C+ G +  A  V   M+M G  PN  +Y
Sbjct: 186 SMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSY 245

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           +++++ L   G+  RA ++  +M  +G + ++ T+N L+R   K    E+   +  +M  
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G     +TYN ++   C+ G++ DA + L+ MV +   P+  ++N +    S+LG+   
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           A  ++ +++     P+ VTYN L+     + + D+   +K +M ++ + P+V T+ IL+ 
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +C MG+   A +   EM+  + LKP    Y   +    + G   K   + E+M   GF
Sbjct: 426 GFCQMGNLPMAKELFDEML-SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGF 483



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 153/301 (50%), Gaps = 1/301 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   +    D+A    D M    +   V TF+ILVR + + G    A   F+ M 
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML 444

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD IA++  I    +    S+A    + +K + F PD+I Y  L+ G C+ GN  
Sbjct: 445 SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  + ++M++ GI P+  TY+ +I A    G + +A +VF++ML+ G  P+ +T+  L+
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLI 564

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             +    R +   + +++M+  G   + ITYN LI   CK+  ++ A  +   M  KG +
Sbjct: 565 HSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVS 624

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  T+ ++    S L     A ++Y  M D + +P++ T++ LM+  +       VL+L
Sbjct: 625 PNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684

Query: 450 K 450
           +
Sbjct: 685 E 685



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/452 (22%), Positives = 169/452 (37%), Gaps = 107/452 (23%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           T+ TF+ ++    + G    AV   + M  +GC P+ ++++++++ L  K     A+   
Sbjct: 206 TIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELI 265

Query: 242 DSL---------------------KDKFE---------------PDVIVYTNLVRGWCRA 265
           + +                     K+ FE               P V+ Y  ++   CR 
Sbjct: 266 EQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRL 325

Query: 266 GNISEAER-----------------------------------VFREMKMAGIQPNVYTY 290
           G +S+A R                                   +F E++   + P+V TY
Sbjct: 326 GRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTY 385

Query: 291 SIVIDALCRCGQIT-----------------------------------RAHDVFAEMLE 315
           + +ID  CR G +                                     A ++F EML 
Sbjct: 386 NTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLS 445

Query: 316 VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            G +P+ I +   +   +K     K   +  +MK  G   D ITYN LI+  CK G  +D
Sbjct: 446 RGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDD 505

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A +++  M  +G  P+  T+  I       G +  A  ++  M      P+ VTY +L+ 
Sbjct: 506 ANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIH 565

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            +A     D   K   EM++  V PNV TY  LI   C     + AY    EM E K + 
Sbjct: 566 SYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM-ESKGVS 624

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           P    Y +++ +       Q   +L + M+DR
Sbjct: 625 PNKYTYTILINENSNLQYWQDALKLYKDMLDR 656



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 5/211 (2%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS---ILCR 230
           MK+      + T+++L+    + G   +A     +M   G  PD + ++ +I    I   
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537

Query: 231 KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
            R+A E   F D LK    P V+ YT L+  +   G +  A++ F EM+  G+ PNV TY
Sbjct: 538 LRKAEEV--FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + +I  LC+   +  A+++FAEM   G  PN  T+  L+  +      +  L++Y  M  
Sbjct: 596 NALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLD 655

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
              + D+ T++ L+    KD KL   +++ N
Sbjct: 656 REIKPDSCTHSALMKHLSKDYKLLAVLRLEN 686


>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 176/378 (46%), Gaps = 3/378 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M+ + G+  Q+ +A    D++      + V   + ++  Y R G    A+  F +M+E G
Sbjct: 208 MVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETG 267

Query: 214 CAPDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
             P  + +++++ +  +  RA S      D ++ K  E D    T ++    R G + EA
Sbjct: 268 LDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEA 327

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            R F ++K+ G +P   TY+ ++    + G  T A ++  EM +  CEP++IT+N L+  
Sbjct: 328 RRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAA 387

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           +V+A   ++   V + M   G   + ITY  +I+ + K G  + A++V   M   GC PN
Sbjct: 388 YVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPN 447

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+N +   + K        ++   MK   C P+ +T+N ++ +         V ++ +
Sbjct: 448 VCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLR 507

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM+    EP+  T+  LI+ Y   G   +  K   EM+      P  + Y  +L  L R 
Sbjct: 508 EMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAG-FTPCITTYNALLNALARR 566

Query: 512 GQLQKHEELVEKMVDRGF 529
           G  +  E +V  M  +GF
Sbjct: 567 GNWKAAESVVLDMRKKGF 584



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 179/381 (46%), Gaps = 3/381 (0%)

Query: 151 YHEMINLAGKV-RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y+ M+++ GK+ R + +    +D M+S+ +E    T + ++    R G+  EA   F+ +
Sbjct: 275 YNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDL 334

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
           +  G  P    ++ ++ +  +    +EA +    ++D   EPD I Y  LV  + RAG  
Sbjct: 335 KLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFH 394

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            E   V   M   G+ PN  TY+ VI+A  + G   +A +VF +M E+GC PN  T+NN+
Sbjct: 395 DEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNV 454

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + +  K SR+E ++++   MK  GC  D IT+N ++    + GK +   +VL  M   G 
Sbjct: 455 LVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGF 514

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  TFN +     + G      +MYG+M      P   TYN L+   A   +      
Sbjct: 515 EPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAES 574

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +  +M +   +PN  +Y +L+  Y   G+     K   E+ +         +  +VL   
Sbjct: 575 VVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNY 634

Query: 509 RRAGQLQKHEELVEKMVDRGF 529
            +  QL+  E    ++ + G+
Sbjct: 635 -KCRQLKGMERAFHQLQNNGY 654



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 156/334 (46%), Gaps = 4/334 (1%)

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCR-KRRASEAQSFFDSLKDKFEPDVIVYTNLVRGW 262
                M+  G  PDK  F+ +IS   R       A+ + + +   F P +  Y  L+   
Sbjct: 504 QVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNAL 563

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            R GN   AE V  +M+  G +PN  +YS+++    + G +     V  E+ +    P+ 
Sbjct: 564 ARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSW 623

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +    L+  + K  + + + + ++Q++  G + D +  N ++    ++ KLE A ++L+ 
Sbjct: 624 MLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDV 683

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +   G  PN  T+N +    +++GD   A  M   +++    P+ V+YN +++ F     
Sbjct: 684 IHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGL 743

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
               +++  EM  N V+P   T+   ++ Y G G +  A + IR MIE  C+ P    Y+
Sbjct: 744 VQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCM-PNELTYK 802

Query: 503 MVLQQLRRAGQLQKHEELVEKM--VDRGFTARPL 534
           +V+    +A + ++  + V K+  +D  F  + L
Sbjct: 803 IVIDGYIKAKKHKEAMDFVSKIKEIDISFDDQSL 836



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 147/341 (43%), Gaps = 40/341 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ M+ + G+  +       +  MK+   E   +TF+ L+  Y R G   +    +  M 
Sbjct: 486 WNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMV 545

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSF-FDSLKDKFEPDVIVYTNLVRGWCRAGNI- 268
             G  P    ++ +++ L R+     A+S   D  K  F+P+   Y+ L+  + +AGN+ 
Sbjct: 546 AAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVR 605

Query: 269 ----------------------------------SEAERVFREMKMAGIQPNVYTYSIVI 294
                                                ER F +++  G + ++   + ++
Sbjct: 606 GLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSML 665

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
               R  ++ +AH++   +   G +PN +T+N+L+ ++ +     K  ++   ++  G  
Sbjct: 666 SMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGIS 725

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D ++YN +I   CK G +++AI++L+ M   G  P   TFN    C +  G    A  +
Sbjct: 726 PDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEV 785

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSK----STDMVLKLKK 451
              M +  C PN +TY I++  +  +K    + D V K+K+
Sbjct: 786 IRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKE 826



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 100/199 (50%), Gaps = 1/199 (0%)

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
           AF++++  G   D +  + ++S+  R ++  +A    D +     +P+++ Y +L+  + 
Sbjct: 645 AFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYA 704

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           R G+  +AE + ++++ +GI P+V +Y+ VI   C+ G +  A  + +EM   G +P  I
Sbjct: 705 RVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPI 764

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN  M  +       +  +V   M   GC  + +TY  +ID + K  K ++A+  ++ +
Sbjct: 765 TFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKI 824

Query: 384 VRKGCNPNASTFNMIFRCI 402
                + +  +   +  CI
Sbjct: 825 KEIDISFDDQSLKKLASCI 843


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 175/362 (48%), Gaps = 1/362 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   I  + S+ + + V  +S L+  Y + G  + A+     M E     D +A++ +  
Sbjct: 500 AQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTK 559

Query: 227 ILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN 286
            L R  +      F   ++    PD + Y +++  +   G    A  +  EMK  G+ PN
Sbjct: 560 GLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPN 619

Query: 287 VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN 346
           + TY+I+I  LC+ G I +   V  EML VG  P  I    L++ + ++ + + +LQ++ 
Sbjct: 620 MVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHK 679

Query: 347 QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           ++  +G   + + YN LI   C+ G  + A  VL  MV KG + +  T+N + R      
Sbjct: 680 KLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGS 739

Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
            V  A   Y +M      PN  TYN L++  +T+       KL  EM E  + PN  TY 
Sbjct: 740 HVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYN 799

Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           IL++ +  +G+  ++ K   EMI  K   P +  Y +++Q   +AG++++  EL+ +M+ 
Sbjct: 800 ILVSGHGRVGNKRDSIKLYCEMI-TKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLT 858

Query: 527 RG 528
           RG
Sbjct: 859 RG 860



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 180/384 (46%), Gaps = 9/384 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +IN   K    + A   +  M   N+   V  ++IL+  Y R G    A   +  M+
Sbjct: 414 FSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMK 473

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
            +G   + I F I+++ L R     EAQS   D L      DV  Y++L+ G+ + GN S
Sbjct: 474 SWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNES 533

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  V +EM    +Q +V  Y+ +   L R G+      VF+ M+E+G  P+ +T+N++M
Sbjct: 534 AALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVM 592

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             +    +TE  L + N+MK  G   + +TYN LI   CK G +E  I VL+ M+  G  
Sbjct: 593 NTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYV 652

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM---FATSKSTDMV 446
           P       + +  S+    +   +++ K+ D+    N + YN L+ +      +K  ++V
Sbjct: 653 PTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVV 712

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L    EM    +  ++ TY  LI  YC   H   A+    +M+    + P  + Y  +L+
Sbjct: 713 L---TEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSG-ISPNITTYNALLE 768

Query: 507 QLRRAGQLQKHEELVEKMVDRGFT 530
            L   G ++  ++LV +M +RG  
Sbjct: 769 GLSTNGLMRDADKLVSEMRERGLV 792



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 181/367 (49%), Gaps = 25/367 (6%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF----- 240
            + LV  Y   GL + A+       + G  PD + ++ +++  C++   ++A+S      
Sbjct: 148 LNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEIL 207

Query: 241 ------------------FDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
                             +D L+D  +P V+ +T L+  +C+   I +   ++ +M M+G
Sbjct: 208 GFRRDDESGVLNDCGVETWDGLRD-LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSG 266

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           + P+V T S ++  LCR G++T A  +  EM  +G +PN +++  ++   +K+ R  +  
Sbjct: 267 VMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAF 326

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
              +QM   G   D +    ++D   K GK ++A ++  ++++    PN  T+  +    
Sbjct: 327 NHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGH 386

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            K+GDV  A  +  KM+     PN VT++ ++  +A     +  +++ ++M +  + PNV
Sbjct: 387 CKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNV 446

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
             Y IL+  Y   G    A  + +EM +   L+  + +++++L  L+R+G +++ + L++
Sbjct: 447 FVYAILLDGYFRTGQHEAAAGFYKEM-KSWGLEENNIIFDILLNNLKRSGGMKEAQSLIK 505

Query: 523 KMVDRGF 529
            ++ +G 
Sbjct: 506 DILSKGI 512



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 162/333 (48%), Gaps = 17/333 (5%)

Query: 176 SRNVEITVD----TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           SR +E+ +     T++ ++  Y   G    A+   N M+ YG  P+ + ++I+I  LC+ 
Sbjct: 574 SRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKT 633

Query: 232 RRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
               +  S   + L   + P  I++  L++ + R+       ++ +++   G+  N   Y
Sbjct: 634 GAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVY 693

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
           + +I  LCR G   +A+ V  EM+  G   + +T+N L+R +   S  EK    Y+QM  
Sbjct: 694 NTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLV 753

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G   +  TYN L++    +G + DA K+++ M  +G  PNA+T+N++     ++G+   
Sbjct: 754 SGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRD 813

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           + ++Y +M      P T TYN+L+Q +A +       +L  EM      PN +TY +LI 
Sbjct: 814 SIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLIC 873

Query: 471 MYC------------GMGHWNNAYKYIREMIEE 491
            +C             + + N A K +REM E+
Sbjct: 874 GWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEK 906



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 165/355 (46%), Gaps = 3/355 (0%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R+++ TV T++ L+  Y +     +    + +M   G  PD +  S ++  LCR  + +E
Sbjct: 230 RDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTE 289

Query: 237 AQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A      + +   +P+ + YT ++    ++G + EA     +M + GI  ++   + ++D
Sbjct: 290 AAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMD 349

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            L + G+   A ++F  +L++   PN +T+  L+  H K    E    V  +M++     
Sbjct: 350 GLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLP 409

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           + +T++ +I+ + K G L  A++VL  MV+    PN   + ++     + G    A   Y
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFY 469

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +MK    E N + ++IL+     S        L K++    +  +V  Y  L+  Y   
Sbjct: 470 KEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKE 529

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           G+ + A   ++EM  EK ++     Y  + + L R G+ +  + +  +M++ G T
Sbjct: 530 GNESAALSVVQEM-TEKDMQFDVVAYNALTKGLLRLGKYEP-KSVFSRMIELGLT 582



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 147/344 (42%), Gaps = 23/344 (6%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDK 247
           L+  +  +G  ++    ++ M   G  P+  + ++++  LC+      A  +  +S+ D 
Sbjct: 16  LLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDH 75

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
                + Y  +V G+C+ G   +   +  EM   G+  +  T +I++   C+ G +  A 
Sbjct: 76  -----VTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAE 130

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            +   ++  G   ++I  N L+  + +     + L +     + G + D +TYN L++  
Sbjct: 131 WIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAF 190

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH-RMYGKMKDLKCEPN 426
           CK G L  A  V+N ++              FR   + G +N      +  ++DL  +P 
Sbjct: 191 CKRGDLAKAESVVNEILG-------------FRRDDESGVLNDCGVETWDGLRDL--QPT 235

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            VT+  L+  +   +  D    L ++M  + V P+V T   ++   C  G    A   +R
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           EM     L P    Y  ++  L ++G++ +      +MV RG +
Sbjct: 296 EMYNMG-LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGIS 338


>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
          Length = 556

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 178/372 (47%), Gaps = 14/372 (3%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM----EEYGCAPDKI 219
           F  AW    L+        +  F+ LVRRY R G A  A+ AF  +    + Y    D  
Sbjct: 86  FAAAWRL--LLAPSPTPPPLAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIP 143

Query: 220 A----FSIVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAE 272
           A     ++ +  LC++     A   F+  + +     PD   Y  L+ GW RAG + +  
Sbjct: 144 AAASLLNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVG 203

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +++ EM++AG++P V TY  +I+ LC   +  +A  +  EM E G E N +T N ++   
Sbjct: 204 KLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYAL 263

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +A R +   +V  +    G   +  T+N L+  +CK G L  A  VL  M  +G +P  
Sbjct: 264 AQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTT 323

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N  F   +K  DV      Y KM      P+ +TY +L++M + +   ++V+++ +E
Sbjct: 324 RTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQE 383

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  +  EP++ T  +LI + C    +  A     +M  ++ + P    Y+ ++++L+R G
Sbjct: 384 MRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMF-KRGIVPQYITYQKLMRELKRLG 442

Query: 513 QLQKHEELVEKM 524
            ++  ++L   M
Sbjct: 443 LVRLIQKLTNLM 454



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 129/300 (43%), Gaps = 1/300 (0%)

Query: 123 RHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT 182
           + G P   V  F  W    P+       Y+ +++   +  + D        M+   V  T
Sbjct: 158 KEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPT 217

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T+  L+          +A+   + M E G   + +  + ++  L +  R  +A    +
Sbjct: 218 VVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLE 277

Query: 243 SLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
                   P++  + +LV G+C+ G+++ A  V + M   GI P   TY+       +  
Sbjct: 278 KFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNS 337

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +    + +++M+  G  P+ +T+  L+++  +A+R E V+Q+  +M+  G E D  T  
Sbjct: 338 DVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATST 397

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C+  + E+A      M ++G  P   T+  + R + +LG V    ++   M+ +
Sbjct: 398 MLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVRLIQKLTNLMRSV 457


>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74750-like [Glycine max]
          Length = 873

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 160/342 (46%), Gaps = 38/342 (11%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF+W+  +P F H    Y  M+ + G+ R+FD     ++ M     +  V T++ L+
Sbjct: 360 ALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLI 419

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             Y  A    EA++ FN M+E GC                                  EP
Sbjct: 420 HCYGCANYLKEALNVFNEMQEVGC----------------------------------EP 445

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D + Y  L+    +AG I  A  +++ M+ AG+ P+ +TYS++I+ L + G +  AH +F
Sbjct: 446 DRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLF 505

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC--HC 368
            EM+E GC PN +T+N ++ +  KA   E  L++Y+ M+  G + D +TY+ +++   HC
Sbjct: 506 CEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHC 565

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
             G LE+A  V   M +K   P+   + ++     K G+V  A   Y  M +    PN  
Sbjct: 566 --GYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVP 623

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           T N L+  F           L + M    + P++ TY +L++
Sbjct: 624 TCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLLS 665



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 140/251 (55%), Gaps = 1/251 (0%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           +  G + + +TY+ ++  L R  +      +  +M++ GC+PN +T+N L+  +  A+  
Sbjct: 369 RQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYL 428

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           ++ L V+N+M+ +GCE D +TY  LID H K G ++ A+ +   M   G +P+  T+++I
Sbjct: 429 KEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVI 488

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G++  AH ++ +M +  C PN VTYNI++ + A +++ +M LKL  +M+    
Sbjct: 489 INCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGF 548

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           +P+  TY I++      G+   A     EM ++K   P   VY +++    +AG ++K  
Sbjct: 549 QPDKVTYSIVMEALGHCGYLEEAESVFVEM-QQKNWVPDEPVYGLLVDLWGKAGNVEKAS 607

Query: 519 ELVEKMVDRGF 529
           E  + M++ G 
Sbjct: 608 EWYQAMLNAGL 618



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 168/364 (46%), Gaps = 22/364 (6%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAE-AVHAFN-RMEEYGCAPDKIAFSIVISILCRK 231
           M  R VE+  D     + R +R G  AE A++  N  M+ Y              IL + 
Sbjct: 310 MNRRIVEVVSD-----ILRQLRWGPTAEKALYNLNFSMDAYQAN----------QILKQL 354

Query: 232 RRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
           +  S A  FFD L+ +  F  D   YT +V    RA       ++  +M   G QPNV T
Sbjct: 355 QDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVT 414

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+ +I        +  A +VF EM EVGCEP+ +T+  L+ +H KA   +  + +Y +M+
Sbjct: 415 YNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQ 474

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G   DT TY+ +I+C  K G L  A  +   MV  GC PN  T+N++    +K  +  
Sbjct: 475 EAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYE 534

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A ++Y  M++   +P+ VTY+I+M+        +    +  EM++    P+   Y +L+
Sbjct: 535 MALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLV 594

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++   G+   A ++ + M+    L P       +L    R  +L     LV+ MV  G 
Sbjct: 595 DLWGKAGNVEKASEWYQAMLNAGLL-PNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGL 653

Query: 530 TARP 533
             RP
Sbjct: 654 --RP 655


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 183/399 (45%), Gaps = 45/399 (11%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M    + ++V   + L+  +       +A+  FNRMEE G APDK+ FS++I   C+ 
Sbjct: 334 DEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKN 393

Query: 232 RRASEAQSFFDSLKD-KFEPDVIVYTNLVRG--------------------W-------- 262
               +A   +  +K     P  ++   +++G                    W        
Sbjct: 394 MEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCN 453

Query: 263 ------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
                 C+ G +  A    R M+  GI+PNV  Y+ ++ A CR   +  A  +F+EMLE 
Sbjct: 454 KIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G +PN+ T++ L+    K    +   +V NQM     EA+ + YN +I+  CK G+   A
Sbjct: 514 GLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKA 573

Query: 377 IKVLNSMVRK-----GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            ++L +++++     GC    +++N I     K GD + A   Y +M +    PN VT+ 
Sbjct: 574 KEMLQNLIKEKRYSMGC----TSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFT 629

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            L+  F  S   D+ L++  EM+  +++ +V  Y  LI  +C       AY    E++ E
Sbjct: 630 SLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELL-E 688

Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             L P  SVY  ++   R  G++    +L +KMV+ G +
Sbjct: 689 LGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGIS 727



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 189/423 (44%), Gaps = 37/423 (8%)

Query: 139 TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
           + R +F  S   ++ ++N   + R+ D A    +LM  RNV   V   + ++   VR+ L
Sbjct: 160 SKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNL 219

Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTN 257
             EA   +N+M   G A D +   +++    R+R+  EA   F  +  +  EPD ++++ 
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSL 279

Query: 258 LVRGWCRAGNISEAERVFREMK-MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            V+  C+  ++  A  + REM+   G+  +  TY+ VI A  + G +  A  V  EM+  
Sbjct: 280 AVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGF 339

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G   + I   +L+      +   K L  +N+M+  G   D + ++ +I+  CK+ ++E A
Sbjct: 340 GIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKA 399

Query: 377 IKVLNSMVRKGCNPNA------------------------STF----------NMIFRCI 402
           +++   M   G  P++                         +F          N IF  +
Sbjct: 400 VEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLL 459

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            K G V+ A      M++   EPN V YN +M      K+ D+   +  EM E  ++PN 
Sbjct: 460 CKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNN 519

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY ILI  +       NA++ I +MI     +    +Y  ++  L + GQ  K +E+++
Sbjct: 520 FTYSILIDGFFKNQDEQNAWEVINQMIASN-FEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 523 KMV 525
            ++
Sbjct: 579 NLI 581



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 172/369 (46%), Gaps = 8/369 (2%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
            Y+ M+    +++  DLA      M  + ++    T+SIL+  + +      A    N+M
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQM 545

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGN 267
                  +++ ++ +I+ LC+  + S+A+    +L  + ++      Y +++ G+ + G+
Sbjct: 546 IASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGD 605

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
              A   +REM   GI PNV T++ +I+  C+  ++  A ++  EM     + +   +  
Sbjct: 606 TDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGA 665

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K +  +    +++++  LG   +   YN LI      GK++ AI +   MV  G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDG 725

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
            + +  T+  +   + K G++  A  +Y ++  L   P+ + Y +L+   +         
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRAS 785

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           K+ +EM++ +  PNV  Y  +I  +   G+ N A++   EM+E+        V++  +  
Sbjct: 786 KMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGL------VHDDTIFN 839

Query: 508 LRRAGQLQK 516
           L  +G+++K
Sbjct: 840 LLVSGRVEK 848



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/287 (19%), Positives = 118/287 (41%), Gaps = 6/287 (2%)

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           FE     +  L+  + R   +  A   F  M    + P V   + V+ +L R   I  A 
Sbjct: 165 FELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAK 224

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           +++ +M+ +G   +++T   LMR  ++  + E+ ++++ ++   G E D + ++  +   
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAA 284

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNAS-TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           CK   L  A+ +L  M  KG  P +  T+  +     K G++  A ++  +M       +
Sbjct: 285 CKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMS 344

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            +    L+  F         L     MEE  + P+   + ++I  +C       A +  +
Sbjct: 345 VIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYK 404

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRA----GQLQKHEELVEKMVDRGF 529
            M +   + P S +   ++Q   +A      L+   +  E  +  GF
Sbjct: 405 RM-KSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGF 450



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/180 (19%), Positives = 80/180 (44%)

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           KR   E  +  +N+L++ + ++ +++ A+   N MV +   P     N +   + +   +
Sbjct: 161 KRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLI 220

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  +Y KM  +    + VT  +LM+     +  +  +K+ + +     EP+   + + 
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLA 280

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C M     A   +REM E+  +      Y  V+    + G +++  ++ ++MV  G
Sbjct: 281 VQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFG 340


>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 168/340 (49%), Gaps = 2/340 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           ++S  +E+     + ++  + ++G    A+     ++  G +P       VI+ L    R
Sbjct: 247 IESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGR 306

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA++ F+ LK+    P    Y  L++G+ + G++ +AE +  EM+ +G  P+ +TYS+
Sbjct: 307 TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 366

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +IDA    G+   A  V  EM   G  PNS  F+ ++  +    + +K  QV  +M+  G
Sbjct: 367 LIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSG 426

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
              D   YN +ID   K   L+ A+   + M  +G  P+A T+N +  C  K G  N A 
Sbjct: 427 VSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAE 486

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++  M++  C P T TYNI++  F   +  + V  L  +M+   +  NV TY  L+ +Y
Sbjct: 487 ELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIY 546

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
              G + +A + + E+++   LKP S++Y  ++    + G
Sbjct: 547 GQSGRFKDAIECL-EVMKSVGLKPSSTMYNALINAYAQRG 585



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 8/329 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S+L+  Y  AG    A      ME  G  P+   FS    IL   R   + Q  F  L
Sbjct: 363 TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFS---RILASYRDRGKWQKSFQVL 419

Query: 245 KD----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           ++       PD   Y  ++  + +   +  A   F  M+M G+QP+  T++ +ID  C+ 
Sbjct: 420 REMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKS 479

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G   +A ++F  M E GC P + T+N ++    +  R E V  +  +M+  G  A+ +TY
Sbjct: 480 GHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTY 539

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             L+D + + G+ +DAI+ L  M   G  P+++ +N +    ++ G    A   +  M+ 
Sbjct: 540 TTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRA 599

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
              +P+ +  N L+  F   +       + + M+EN+++P+V TY  L+     +  ++ 
Sbjct: 600 DGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDK 659

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
                 EM    C  P      M+   LR
Sbjct: 660 VPAVYEEMTLSGC-TPDRKARAMLRSALR 687



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 144/321 (44%), Gaps = 9/321 (2%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y  +I+      +++ A   +  M++  V      FS ++  Y   G   ++  
Sbjct: 358 SPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQ 417

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
               M   G +PD+  ++++I    +      A + FD ++ +  +PD + +  L+   C
Sbjct: 418 VLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHC 477

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV---FAEMLEVGCEP 320
           ++G+ ++AE +F  M+ +G  P   TY+I+I++    G+  R  DV     +M   G   
Sbjct: 478 KSGHHNKAEELFEAMQESGCSPCTTTYNIMINSF---GEQERWEDVKTLLGKMQSQGLLA 534

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           N +T+  L+ ++ ++ R +  ++    MK +G +  +  YN LI+ + + G  E AI   
Sbjct: 535 NVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAF 594

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M   G  P+    N +     +      A  +   MK+   +P+ VTY  LM+     
Sbjct: 595 RVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRV 654

Query: 441 KSTDMVLKLKKEMEENEVEPN 461
           +  D V  + +EM  +   P+
Sbjct: 655 EKFDKVPAVYEEMTLSGCTPD 675



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/422 (19%), Positives = 170/422 (40%), Gaps = 46/422 (10%)

Query: 150 LYHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDT-FSILVRRYVRAGLAAEAVHAFN 207
           L+H ++ +L         A+  +  ++  N+  + +  +SIL+      G + +   AF 
Sbjct: 119 LWHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHAL---GRSEKLYEAFL 175

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRA- 265
             +     P  + ++ +I    R     +A +    ++ D F  D + Y+ +++   R  
Sbjct: 176 LSQRQTLTP--LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTN 233

Query: 266 -GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             + S  ++++ E++   I+ +    + +I    + G + RA    A +   G  P + T
Sbjct: 234 KSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTAT 293

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
              ++     A RTE+   ++ ++K  G    T  YN L+  + K G L+DA  +++ M 
Sbjct: 294 LVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEME 353

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGA-------------------------HRMYGK-- 417
           R G +P+  T++++    +  G    A                         +R  GK  
Sbjct: 354 RSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQ 413

Query: 418 --------MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
                   M++    P+   YN+++  F      D  L     M    V+P+  T+  LI
Sbjct: 414 KSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLI 473

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +C  GH N A +    M E  C  P ++ Y +++       + +  + L+ KM  +G 
Sbjct: 474 DCHCKSGHHNKAEELFEAMQESGC-SPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGL 532

Query: 530 TA 531
            A
Sbjct: 533 LA 534



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++++ G+  +F  A   +++MKS  ++ +   ++ L+  Y + GL+ +A++AF  M 
Sbjct: 539 YTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMR 598

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P  +  + +I+     RR +EA S    +K+   +PDV+ YT L++   R     
Sbjct: 599 ADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFD 658

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL 297
           +   V+ EM ++G  P+    +++  AL
Sbjct: 659 KVPAVYEEMTLSGCTPDRKARAMLRSAL 686



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 82/182 (45%), Gaps = 8/182 (4%)

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           C +  + Y+ LI    +  KL +A  +     R+   P   T+N +    ++  D+  A 
Sbjct: 150 CFSYELLYSILIHALGRSEKLYEAFLLSQ---RQTLTP--LTYNALIGACARNDDLEKAL 204

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTD--MVLKLKKEMEENEVEPNVNTYRILIT 470
            +  +M+      + V Y+ ++Q    +  +D  M+ K+  E+E +++E +      +I 
Sbjct: 205 NLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIV 264

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +   G  N A  ++  M++   L P ++    V+  L  AG+ ++ E + E++ + G  
Sbjct: 265 GFAKSGDVNRAMSFL-AMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLM 323

Query: 531 AR 532
            R
Sbjct: 324 PR 325


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 175/361 (48%), Gaps = 3/361 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +++   ++ + D A +F++ +    ++++   ++ L+   V+  L  EAV  F    E  
Sbjct: 150 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY 209

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
             PD  +F+I+I  LCR     +A  FF ++ +    PD++ Y  L+ G+CR   IS+  
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269

Query: 273 RVFRE-MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            + +E M + G+ P+V TY+ +I   C+ G +  A ++F EM+  G +PN  TFN L+  
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K       + +Y +M  LGC  D +T+  LID +C++G++   +K+   M  +  +PN
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPN 389

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+ ++   + K   +  A      +K  +  P    YN ++  F  +   D    +  
Sbjct: 390 VYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVA 449

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM+E +  P+  T+ ILI   C  G    A     +MIE  C+ P       ++  L +A
Sbjct: 450 EMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCV-PDEITINSLISCLLKA 508

Query: 512 G 512
           G
Sbjct: 509 G 509



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 38/345 (11%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            + +++  LC+      A+  FD ++ D   PD  +   LV  + R G +  A+    E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              GI+ + + Y+ +++ L +   +  A  +F E LE    P+  +FN L+R   +    
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLID--C------------------------------ 366
           +K  + +  M   GC  D ++YN LI+  C                              
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 367 ----HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
               +CK G ++ A ++ + MV  G  PN  TFN++     K+G++  A  MY KM  L 
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C P+ VT+  L+  +      +  LKL +EM+   + PNV TY +LI   C       A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            ++R +   + + P   +Y  V+    +AG++ +   +V +M ++
Sbjct: 411 NFLRHLKSSEVV-PKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK 454



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 3/243 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I+   K+     A    D M S  ++    TF++L+  + + G    A+ 
Sbjct: 282 SPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMV 341

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            + +M   GC PD + F+ +I   CR+   ++    ++ +K +   P+V  Y  L+   C
Sbjct: 342 MYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALC 401

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   I EA    R +K + + P  + Y+ VID  C+ G++  A+ + AEM E  C P+ I
Sbjct: 402 KENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKI 461

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TF  L+  +    R  + +  + +M  + C  D IT N LI C  K G   +A ++  + 
Sbjct: 462 TFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAA 521

Query: 384 VRK 386
           ++K
Sbjct: 522 LQK 524



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 43/244 (17%)

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA------- 376
           T++ LMR   K    +    V++ M+  G   D+     L+  + + GKL+ A       
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 377 ----IKV--------LNSMVRKGC----------------NPNASTFNMIFRCISKLGDV 408
               IKV        LN +V++                   P+  +FN++ R + ++G++
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFA----TSKSTDMVLKLKKEMEENEVEPNVNT 464
           + A   +  M +  C P+ V+YN L+  F      SK  D+   LK++M    V P+V T
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL---LKEDMLIKGVSPDVIT 287

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  +I+ YC +G    A +   EM+    +KP    + +++    + G ++    + EKM
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSG-IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 525 VDRG 528
           +  G
Sbjct: 347 LLLG 350



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%)

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           E V  P +Y+ +I+   K  + D A   +  M+ +       TF+IL+      G   EA
Sbjct: 420 EVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEA 479

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           +  F +M E  C PD+I  + +IS L +    +EA 
Sbjct: 480 ISTFYKMIEINCVPDEITINSLISCLLKAGMPNEAS 515


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 169/347 (48%), Gaps = 1/347 (0%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           ++Y  +I+   K +    A+     M  + +   V T+S L+  +   G   EA+   N 
Sbjct: 448 EMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNE 507

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGN 267
           M      PD   ++I++  L ++ +  EA+S     LK   +PDV  Y  L+ G+     
Sbjct: 508 MVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYE 567

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A+ VF  M + G+ P+V+TY+I+I+  C+   +  A ++F EM +    P+++T+++
Sbjct: 568 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSS 627

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K+ R   V  + ++M+  G  AD ITYN LID  CK+G L+ AI + N M  +G
Sbjct: 628 LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN  TF ++   + K G +  A  ++  +       +   YN+++         +  L
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
            +  +MEEN   PN  T+ I+I         + A K +R+MI    L
Sbjct: 748 TMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 191/409 (46%), Gaps = 40/409 (9%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   A HF D + ++  ++   +++ L+    + G    A+    +++     P
Sbjct: 389 LKGQVKK---ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKP 445

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           +   +S +I  LC+ +  SEA   F  +  K    DV+ Y+ L+ G+C  G + EA  + 
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLL 505

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I P+V TY+I++DAL + G++  A  V A ML+   +P+  T+N LM  ++  
Sbjct: 506 NEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLV 565

Query: 336 SRTEKVLQVYNQMKRLG---------------CEA--------------------DTITY 360
              +K   V+N M  +G               C++                    DT+TY
Sbjct: 566 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTY 625

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + L+D  CK G++     +++ M  +G   +  T+N +   + K G ++ A  ++ KMKD
Sbjct: 626 SSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKD 685

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
               PNT T+ IL+             ++ +++       +V  Y ++I  +C  G    
Sbjct: 686 QGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEE 745

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A   + +M E  C+ P +  +++++  L +  +  K E+L+ +M+ RG 
Sbjct: 746 ALTMLSKMEENGCI-PNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 182/385 (47%), Gaps = 6/385 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++++++   K++ +  A      ++ + ++  + T +IL+  +   G          ++ 
Sbjct: 310 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKIL 369

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P  +  + +I  LC K +  +A  F D L    F+ + + Y  L+ G C+ G+  
Sbjct: 370 KRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 429

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A ++ R++     +PNV  YS +IDALC+   ++ A+ +F+EM   G   + +T++ L+
Sbjct: 430 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 489

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + ++ + + N+M       D  TY  L+D   K+GK+++A  VL  M++    
Sbjct: 490 YGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVK 549

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+  T+N +      + +V  A  ++  M  +   P+  TY IL+  F  SK  D  L L
Sbjct: 550 PDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNL 609

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV-YEMVLQQL 508
            KEM +  + P+  TY  L+   C  G  +  +  I EM +    +P   + Y  ++  L
Sbjct: 610 FKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG--QPADVITYNSLIDGL 667

Query: 509 RRAGQLQKHEELVEKMVDRGFTARP 533
            + G L K   L  KM D+G   RP
Sbjct: 668 CKNGHLDKAIALFNKMKDQGI--RP 690



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 182/410 (44%), Gaps = 39/410 (9%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   A HF D + ++  ++   +++ L+    R G    A+    +++     P
Sbjct: 75  LKGQVKE---ALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKP 131

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           +   ++ +I  LC+ +  SEA   F  +  K    +V+ Y+ L+ G+C  G + EA  + 
Sbjct: 132 NVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLL 191

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M +  I PNV TY+I++DALC+ G++  A  V A ML+   + N IT++ LM  +   
Sbjct: 192 NVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLV 251

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI------------------ 377
              +K   V+N M  +G   D  +YN +I+  CK  +++ A+                  
Sbjct: 252 YEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFN 311

Query: 378 KVLNSMVR----------------KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           K+L+S  +                KG  P+  T N++  C   +G +     +  K+   
Sbjct: 312 KILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKR 371

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
              P+TVT N L++           L    ++     + N  +Y  LI   C +G    A
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 431

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
            K +R+ I+ +  KP   +Y  ++  L +   + +   L  +M  +G +A
Sbjct: 432 IKLLRK-IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 480



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 178/372 (47%), Gaps = 4/372 (1%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV++   A   + +M    V+  V T+S L+  Y       +A H FN M   G  PD 
Sbjct: 217 GKVKE---AKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 273

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            +++I+I+  C+ +R  +A + F  +     P +I +  ++  + +  + S A  +   +
Sbjct: 274 HSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRL 333

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           ++ GIQP+++T +I+I+  C  GQIT    V A++L+ G  P+++T N L++      + 
Sbjct: 334 ELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQV 393

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           +K L  ++++   G + + ++Y  LI+  CK G    AIK+L  +  +   PN   ++ I
Sbjct: 394 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 453

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + K   V+ A+ ++ +M       + VTY+ L+  F         + L  EM    +
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
            P+V TY IL+      G    A K +  ++ + C+KP    Y  ++       +++K +
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEA-KSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQ 572

Query: 519 ELVEKMVDRGFT 530
            +   M   G T
Sbjct: 573 HVFNAMSLMGVT 584



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 178/378 (47%), Gaps = 3/378 (0%)

Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
           ++Y+ +I+   K +    A+     M  + +   V T+S L+  +   G   EA+   N 
Sbjct: 134 EMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNV 193

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGN 267
           M      P+   ++I++  LC++ +  EA+S     LK   + +VI Y+ L+ G+     
Sbjct: 194 MVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYE 253

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A+ VF  M + G+ P+V++Y+I+I+  C+  ++ +A ++F EM+ +   P  I FN 
Sbjct: 254 VKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI-LSRFPPIIQFNK 312

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           ++    K       + + ++++  G + D  T N LI+C C  G++     VL  ++++G
Sbjct: 313 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG 372

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+  T N + + +   G V  A   + K+     + N V+Y  L+        T   +
Sbjct: 373 YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           KL ++++    +PNV  Y  +I   C     + AY    EM   K +      Y  ++  
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYG 491

Query: 508 LRRAGQLQKHEELVEKMV 525
               G+L++   L+ +MV
Sbjct: 492 FCIVGKLKEAIGLLNEMV 509



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 135/243 (55%), Gaps = 3/243 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ ++N    V +   A H  + M    V   V T++IL+  + ++ +  EA++ 
Sbjct: 550 PDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNL 609

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCR 264
           F  M +    PD + +S ++  LC+  R S      D ++D+ +P DVI Y +L+ G C+
Sbjct: 610 FKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCK 669

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++ +A  +F +MK  GI+PN +T++I++D LC+ G++  A +VF ++L  G   +   
Sbjct: 670 NGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYI 729

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++  H K    E+ L + ++M+  GC  + +T++ +I+   K  + + A K+L  M+
Sbjct: 730 YNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMI 789

Query: 385 RKG 387
            +G
Sbjct: 790 ARG 792



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 160/331 (48%), Gaps = 3/331 (0%)

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNL 258
           A ++    ++ + G  PD +  + +I  LC K +  EA  F D L    F+ + + Y  L
Sbjct: 45  AVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATL 104

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G CR G+   A +  R++     +PNV  Y+ +IDALC+   ++ A+ +F+EM   G 
Sbjct: 105 INGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGI 164

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
             N +T++ L+       + ++ L + N M       +  TYN L+D  CK+GK+++A  
Sbjct: 165 SANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKS 224

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
           VL  M++     N  T++ +      + +V  A  ++  M  +   P+  +YNI++  F 
Sbjct: 225 VLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFC 284

Query: 439 TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGS 498
             K  D  L L KEM  +   P +   +IL + +  M H++ A   +   +E K ++P  
Sbjct: 285 KIKRVDKALNLFKEMILSRFPPIIQFNKILDS-FAKMKHYSTAVS-LSHRLELKGIQPDL 342

Query: 499 SVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               +++      GQ+     ++ K++ RG+
Sbjct: 343 FTLNILINCFCHMGQITFGFSVLAKILKRGY 373


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 184/378 (48%), Gaps = 3/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MIN     +   LA   ++ M    ++  V  +SIL+  Y   G   EA    + M 
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G APD   ++ +IS L +  +  EA ++   ++ +  +PD + +   + G+ + G ++
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 560

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA + F EM   G+ PN   Y+++I+   + G +  A  +F  +  +G  P+  T +  +
Sbjct: 561 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFI 620

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              +K  R ++ L+V++++K  G   D  TY+ LI   CK G++E A ++ + M  KG  
Sbjct: 621 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 680

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN   +N +   + K GD+  A +++  M +   EP++VTY+ ++  +  S++      L
Sbjct: 681 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 740

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM    V+P+   Y  L+   C  G    A    REM+++      S  +  ++    
Sbjct: 741 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS--FNTLIDGYC 798

Query: 510 RAGQLQKHEELVEKMVDR 527
           ++ ++Q+  +L ++M+ +
Sbjct: 799 KSCKIQEASQLFQEMIAK 816



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 218/466 (46%), Gaps = 28/466 (6%)

Query: 84  SLNPD-FTIPSLSLGFSQISTA------------HSISPSTVRHVIEKSCGVRHGIPLLQ 130
            L PD  T  +  LG+S+                H + P+   + +  +   + G  L++
Sbjct: 538 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG-NLME 596

Query: 131 VLSFFNWVTAR---PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
            LS F  + A    P+        H ++   G+V++   A      +K + +   V T+S
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLK-NGRVQE---ALKVFSELKEKGLVPDVFTYS 652

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            L+  + + G   +A    + M   G AP+   ++ ++  LC+      A+  FD + +K
Sbjct: 653 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 712

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             EPD + Y+ ++ G+C++ N++EA  +F EM   G+QP+ + Y+ ++   C+ G + +A
Sbjct: 713 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 772

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            ++F EML+ G    +++FN L+  + K+ + ++  Q++ +M       D +TY  +ID 
Sbjct: 773 MNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 831

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           HCK GK+E+A  +   M  +    +  T+  +    +KLG  +    ++ KM     +P+
Sbjct: 832 HCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 891

Query: 427 TVTYNILMQMFATSKSTDMV--LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            VTY ++  ++A  K  ++V   KL+ E+    +      + +LIT  C       A K 
Sbjct: 892 EVTYGLV--IYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 949

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           + EM  E  LKP  +    +++    AG++ +   + E +   G  
Sbjct: 950 LDEM-GELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLV 994



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 186/386 (48%), Gaps = 6/386 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP ++  +I+   ++   D A +   + K+ ++ I++   + L++  ++ G+       +
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           N M +     D   ++ ++  LC+      A+     + +K   P+  +Y+ ++ G C+ 
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G+I EA  + R M   G+ PN YTY+I+   LCR  ++  A   F EM + G +P+    
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNAC 336

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           + L+   ++    ++VL++ + M   G   + ITYN LI   CK GK+E A ++L  MV 
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            GC PN+ TF ++     +  ++  A  +  +M+     P+ V+Y  ++      K   +
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC--LKPGSSVYEM 503
             KL ++M  + ++PNV  Y ILI  Y   G    A + +  M    C  + P    Y  
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM---SCSGVAPDIFCYNA 513

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++  L +AG++++    + ++  RG 
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGL 539



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 173/357 (48%), Gaps = 15/357 (4%)

Query: 172 DLMKSRNVEITVD---------TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           DL  ++ V I +D          +S+++    + G   EAV     M E G  P+   ++
Sbjct: 243 DLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYT 302

Query: 223 IVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           I+ + LCR +R +EA+  F+ + K   +PD    + L+ G+ R G+I E  R+   M   
Sbjct: 303 IITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC 362

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           GI  N+ TY+++I  LC+ G++ +A ++   M+ +GC+PNS TF  L+  + +     + 
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRA 422

Query: 342 LQVYNQMKRLGCEADTITYNFLID--CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           L++ ++M++       ++Y  +I+  CHCKD  L  A K+L  M   G  PN   ++++ 
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKD--LSLANKLLEKMTFSGLKPNVVVYSILI 480

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
              +  G +  A R+   M      P+   YN ++   + +   +       E++   ++
Sbjct: 481 MAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 540

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
           P+  T+   I  Y   G    A KY  EM++   L P + +Y +++    +AG L +
Sbjct: 541 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG-LMPNNPLYTVLINGHFKAGNLME 596



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 166/365 (45%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +D M+ RN+  +  ++  ++         + A     +M   G  P+ + +SI+I 
Sbjct: 422 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIM 481

Query: 227 ILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
               + R  EA+   D +      PD+  Y  ++    +AG + EA     E++  G++P
Sbjct: 482 AYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 541

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +  T+   I    + G++T A   F EML+ G  PN+  +  L+  H KA    + L ++
Sbjct: 542 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
            ++  LG   D  T +  I    K+G++++A+KV + +  KG  P+  T++ +     K 
Sbjct: 602 RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G+V  A  ++ +M      PN   YN L+     S       KL   M E  +EP+  TY
Sbjct: 662 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 721

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             +I  YC   +   A+    EM   K ++P S VY  ++    + G ++K   L  +M+
Sbjct: 722 STMIDGYCKSENVAEAFSLFHEM-PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 780

Query: 526 DRGFT 530
            +GF 
Sbjct: 781 QKGFA 785



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 155/315 (49%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +++   K      A    D M  + +E    T+S ++  Y ++   AEA   F+ M
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              G  P    ++ ++   C++    +A + F  +  K     + +  L+ G+C++  I 
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 804

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++F+EM    I P+  TY+ VID  C+ G++  A+ +F EM E     +++T+ +LM
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K  ++ +V  ++ +M   G + D +TY  +I  HCK+  L +A K+ + +V KG  
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
              +  +++   + K  D+  A ++  +M +L  +P+    N L++ F  +   D   ++
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984

Query: 450 KKEMEENEVEPNVNT 464
            + ++   + P+  T
Sbjct: 985 FEGVKSLGLVPDTTT 999



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 186/423 (43%), Gaps = 45/423 (10%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+ Y   I  AG  + ++ + A    + M+   ++   +  S L+  ++R G   E +  
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 355

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
            + M   G   + I ++++I  LC+  +  +A      +     +P+   +  L+ G+CR
Sbjct: 356 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCR 415

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             N+  A  +  EM+   + P+  +Y  +I+ LC C  ++ A+ +  +M   G +PN + 
Sbjct: 416 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 475

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+  +    R E+  ++ + M   G   D   YN +I C  K GK+E+A   L  + 
Sbjct: 476 YSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 535

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM---------- 434
            +G  P+A TF       SK G +  A + + +M D    PN   Y +L+          
Sbjct: 536 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 595

Query: 435 -------QMFATSKSTDM------------------VLKLKKEMEENEVEPNVNTYRILI 469
                  ++ A     D+                   LK+  E++E  + P+V TY  LI
Sbjct: 596 EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 655

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLK---PGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           + +C  G    A+    E+ +E CLK   P   +Y  ++  L ++G +Q+  +L + M +
Sbjct: 656 SGFCKQGEVEKAF----ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711

Query: 527 RGF 529
           +G 
Sbjct: 712 KGL 714



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 36/239 (15%)

Query: 182  TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
            T  +F+ L+  Y ++    EA   F  M      PD + ++ VI   C+  +  EA   F
Sbjct: 786  TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 845

Query: 242  DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI------ 294
              ++++    D + YT+L+ G+ + G  SE   +F +M   G++P+  TY +VI      
Sbjct: 846  KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 905

Query: 295  -----------------------------DALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
                                          ALC+   +T A  +  EM E+G +P+    
Sbjct: 906  DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 965

Query: 326  NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            N L+R   +A + ++  +V+  +K LG   DT T   L++ +  D   EDA  ++  +V
Sbjct: 966  NTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
 gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
          Length = 834

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 34/340 (10%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
            L FF+W+   P F H    Y  M+ + G+ +QF      +D M     + TV T++ L+
Sbjct: 321 ALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLI 380

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
             Y RA    +AV  FN+M++ GC                                  EP
Sbjct: 381 HSYGRANYLNDAVEVFNQMQKAGC----------------------------------EP 406

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           D + Y  L+    +AG ++ A  +++ M+ AG+ P+ +TYS++I+ L + G +  A  +F
Sbjct: 407 DRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLF 466

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            EM+E GC PN +T+N ++ +  KA   +  L++Y  M+  G E D +TY+ +++     
Sbjct: 467 CEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHS 526

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G L++A  + + M RK   P+   + ++     K G+V  A   Y  M      PN  T 
Sbjct: 527 GYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTC 586

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           N L+  F           L + M    + P++ TY +L++
Sbjct: 587 NSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLS 626



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 138/251 (54%), Gaps = 1/251 (0%)

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           ++ G + + YTY+ ++  L R  Q    + +  +M+  GC+P  +T+N L+  + +A+  
Sbjct: 330 QLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYL 389

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
              ++V+NQM++ GCE D +TY  LID H K G L  A+++   M   G +P+  T++++
Sbjct: 390 NDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVM 449

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
             C+ K G +  A +++ +M +  C PN VTYNI++ + A +++    LKL ++M+    
Sbjct: 450 INCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGF 509

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           EP+  TY I++ +    G+ + A     EM + K   P   VY +++    +AG ++K  
Sbjct: 510 EPDKVTYSIVMEVLGHSGYLDEAEAIFSEM-KRKNWVPDEPVYGLLVDLWGKAGNVEKAW 568

Query: 519 ELVEKMVDRGF 529
           E  + M+  G 
Sbjct: 569 EWYQAMLHAGL 579



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 165/350 (47%), Gaps = 11/350 (3%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI--------VISILCRKRRASEAQSFF 241
            R++V  G   E V    R   +G + ++   ++           +L + +  + A  FF
Sbjct: 266 ARQFVSTGHVVENVSQILRQLRWGPSAEEALVNLNCHMDAYQANQVLKQLQDHTVALGFF 325

Query: 242 DSLKD--KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
             LK    F+ D   YT +V    RA       ++  +M   G QP V TY+ +I +  R
Sbjct: 326 HWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGR 385

Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
              +  A +VF +M + GCEP+ +T+  L+ +H KA      +++Y +M+  G   DT T
Sbjct: 386 ANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFT 445

Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           Y+ +I+C  K G L  A K+   M+ +GC PN  T+N++    +K  +   A ++Y  M+
Sbjct: 446 YSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQ 505

Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
           +   EP+ VTY+I+M++   S   D    +  EM+     P+   Y +L+ ++   G+  
Sbjct: 506 NAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVE 565

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            A+++ + M+    L P       +L    R  +L     L++ M++ G 
Sbjct: 566 KAWEWYQAMLHAG-LCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGL 614


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 183/415 (44%), Gaps = 38/415 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   +  + + A   +D+M+    + +  T++ L+   +      +A      ME
Sbjct: 269 YNVVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLITGLLARDFVEKAGALLLEME 327

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G  P  + ++ +I  L +   A  AQ  FD ++ K   PD+I Y +L+ G+C+AGN+ 
Sbjct: 328 NEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLK 387

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH-------------DV------- 309
           +A  +F ++K AG+ P V TY+I+ID  CR G +  A              DV       
Sbjct: 388 QALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILM 447

Query: 310 ---------------FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
                          F EML  G EP+   +N  +   +         Q+  +M   G  
Sbjct: 448 NGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGIS 507

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
           +DT+TYN LID  CK G L+DA  +   MV  G   +  T+  +     + G +  A  +
Sbjct: 508 SDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNI 567

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           +  M      P+ VTY I +  +    +  +     ++M E  VEPN  TY +L+   C 
Sbjct: 568 FDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCR 627

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           MG   +AY++  EM+ E+ L P    Y +++    + G       L  +M  +G 
Sbjct: 628 MGRTESAYQHFHEML-ERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGI 681



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 166/359 (46%), Gaps = 3/359 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE--YGCAPDKIAFSIVISILCRK 231
           M    VE ++ T++ L+  + +AG   +AV     ME    GC P+ + +++VI+ L RK
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279

Query: 232 RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
               +A    D ++   +     Y  L+ G      + +A  +  EM+  GI P V TY+
Sbjct: 280 GELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYN 339

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +ID L + G    A   F EM   G  P+ IT+N+L+  + KA   ++ L ++  +KR 
Sbjct: 340 TLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA 399

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G     +TYN LID +C+ G LE A ++   M  + C P+  T+ ++      + ++   
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV 459

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              + +M     EP+   YN  +    T  +     +L++EM    +  +  TY +LI  
Sbjct: 460 RIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDG 519

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            C  G   +AY    +M+ +  L+     Y  ++      G+L + + + + MV  G +
Sbjct: 520 LCKTGSLKDAYVLWMKMVTDG-LRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLS 577



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 4/345 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  Y+ +IN   K      A      +K   +  TV T++IL+  Y R G    A   
Sbjct: 368 PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL 427

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              M E  C PD   ++I+++  C  R  +  + FFD +  K  EPD   Y   +     
Sbjct: 428 KEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELT 487

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G I+ A ++  EM + GI  +  TY+++ID LC+ G +  A+ ++ +M+  G   + +T
Sbjct: 488 IGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  H +  R  +   +++ M   G     +TY   I  +C+ G L  A      M+
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKML 607

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +G  PN  T+N++   + ++G    A++ + +M +    PN  TY +L+       +  
Sbjct: 608 EEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWV 667

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
             ++L  EM +  + P+  T+  L   + G GH  +A +Y+  ++
Sbjct: 668 HAIRLYCEMHQKGIHPDHCTHNALFKGF-GEGHMYDAVQYLENVV 711


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 175/361 (48%), Gaps = 3/361 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +++   ++ + D A +F++ +    ++++   ++ L+   V+  L  EAV  F    E  
Sbjct: 150 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY 209

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
             PD  +F+I+I  LCR     +A  FF ++ +    PD++ Y  L+ G+CR   IS+  
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269

Query: 273 RVFRE-MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            + +E M + G+ P+V TY+ +I   C+ G +  A ++F EM+  G +PN  TFN L+  
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             K       + +Y +M  LGC  D +T+  LID +C++G++   +K+   M  +  +PN
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPN 389

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+ ++   + K   +  A      +K  +  P    YN ++  F  +   D    +  
Sbjct: 390 VYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVA 449

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           EM+E +  P+  T+ ILI   C  G    A     +MIE  C+ P       ++  L +A
Sbjct: 450 EMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCV-PDEITINSLISCLLKA 508

Query: 512 G 512
           G
Sbjct: 509 G 509



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 38/345 (11%)

Query: 220 AFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            + +++  LC+      A+  FD ++ D   PD  +   LV  + R G +  A+    E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              GI+ + + Y+ +++ L +   +  A  +F E LE    P+  +FN L+R   +    
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLID--C------------------------------ 366
           +K  + +  M   GC  D ++YN LI+  C                              
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 367 ----HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
               +CK G ++ A ++ + MV  G  PN  TFN++     K+G++  A  MY KM  L 
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C P+ VT+  L+  +      +  LKL +EM+   + PNV TY +LI   C       A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            ++R +   + + P   +Y  V+    +AG++ +   +V +M ++
Sbjct: 411 NFLRHLKSSEVV-PKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK 454



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 3/243 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I+   K+     A    D M S  ++    TF++L+  + + G    A+ 
Sbjct: 282 SPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMV 341

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            + +M   GC PD + F+ +I   CR+   ++    ++ +K +   P+V  Y  L+   C
Sbjct: 342 MYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALC 401

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   I EA    R +K + + P  + Y+ VID  C+ G++  A+ + AEM E  C P+ I
Sbjct: 402 KENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKI 461

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TF  L+  +    R  + +  + +M  + C  D IT N LI C  K G   +A ++  + 
Sbjct: 462 TFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAA 521

Query: 384 VRK 386
           ++K
Sbjct: 522 LQK 524



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 43/244 (17%)

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA------- 376
           T++ LMR   K    +    V++ M+  G   D+     L+  + + GKL+ A       
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 377 ----IKV--------LNSMVRKGC----------------NPNASTFNMIFRCISKLGDV 408
               IKV        LN +V++                   P+  +FN++ R + ++G++
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFA----TSKSTDMVLKLKKEMEENEVEPNVNT 464
           + A   +  M +  C P+ V+YN L+  F      SK  D+   LK++M    V P+V T
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL---LKEDMLIKGVSPDVIT 287

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  +I+ YC +G    A +   EM+    +KP    + +++    + G ++    + EKM
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSG-IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 525 VDRG 528
           +  G
Sbjct: 347 LLLG 350



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%)

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           E V  P +Y+ +I+   K  + D A   +  M+ +       TF+IL+      G   EA
Sbjct: 420 EVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEA 479

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQ 238
           +  F +M E  C PD+I  + +IS L +    +EA 
Sbjct: 480 ISTFYKMIEINCVPDEITINSLISCLLKAGMPNEAS 515


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 193/377 (51%), Gaps = 4/377 (1%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPDLY  + ++N   +  Q   A  ++  M    +E  + T S LV  +  +    +AV+
Sbjct: 45  SPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVY 104

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
              +ME+ G   D +  +I+I  LC+ R    A      +KD+   P+V+ Y++L+ G C
Sbjct: 105 VAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLC 164

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           ++G +++AER   EM    I PNV T+S +IDA  + G++++   V+  M+++  +PN  
Sbjct: 165 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 224

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+++L+      +R ++ +++ + M   GC  + +TY+ L +   K  +++D IK+L+ M
Sbjct: 225 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 284

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            ++G   N  + N + +   + G ++ A  ++G M      PN  +YNI++     +   
Sbjct: 285 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 344

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  L   + M++   + ++ TY I+I   C       AY    ++ + K ++P    Y +
Sbjct: 345 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL-KFKRVEPDFKAYTI 403

Query: 504 VLQQLRRAGQLQKHEEL 520
           ++ +L RAG   + + L
Sbjct: 404 MIAELNRAGMRTEADAL 420



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 164/350 (46%), Gaps = 19/350 (5%)

Query: 124 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 183
           +  PL  ++ F   +TA    +    +Y  +INL          W  I+   +  +EI+ 
Sbjct: 3   YSYPLPSIVEFNKVLTA----IAKMQMYDVVINL----------WKRIE--NAEGIEISP 46

Query: 184 DTFS--ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           D ++  ILV  + R    + A+    +M + G  PD +  S +++  C      +A    
Sbjct: 47  DLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVA 106

Query: 242 DSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             + K   + DV+V T L+   C+   +  A  V + MK  GI PNV TYS +I  LC+ 
Sbjct: 107 GQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKS 166

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G++  A     EM      PN ITF+ L+  + K  +  KV  VY  M ++  + +  TY
Sbjct: 167 GRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY 226

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + LI   C   ++++AIK+L+ M+ KGC PN  T++ +     K   V+   ++   M  
Sbjct: 227 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 286

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
                NTV+ N L++ +  +   D+ L +   M  N + PN+ +Y I++ 
Sbjct: 287 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 336



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 1/249 (0%)

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           I P++YT +I+++  CRC Q + A     +M+++G EP+ +T ++L+     ++  +  +
Sbjct: 44  ISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAV 103

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            V  QM+++G + D +    LID  CK+  +  A++VL  M  +G +PN  T++ +   +
Sbjct: 104 YVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGL 163

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
            K G +  A R   +M   K  PN +T++ L+  +A       V  + K M +  ++PNV
Sbjct: 164 CKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNV 223

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
            TY  LI   C     + A K +  MI + C  P    Y  +     ++ ++    +L++
Sbjct: 224 FTYSSLIYGLCMHNRVDEAIKMLDLMISKGC-TPNVVTYSTLANGFFKSSRVDDGIKLLD 282

Query: 523 KMVDRGFTA 531
            M  RG  A
Sbjct: 283 DMPQRGVAA 291



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 8/190 (4%)

Query: 88  DFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHS 147
           D  I  L L  S+  T + ++ ST+ +   KS  V  GI LL  +               
Sbjct: 240 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 299

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
              Y +    AGK+   DLA      M S  +   + +++I++      G   +A+  F 
Sbjct: 300 IKGYFQ----AGKI---DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 352

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAG 266
            M++     D I ++I+I  +C+     EA   F  LK  + EPD   YT ++    RAG
Sbjct: 353 HMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 412

Query: 267 NISEAERVFR 276
             +EA+ + R
Sbjct: 413 MRTEADALNR 422


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 169/349 (48%), Gaps = 5/349 (1%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           T  T+S L   Y R G   EA    + M      P   A++ ++  LC + +  +A    
Sbjct: 119 TAVTYSALADGYCRVGRLDEARRVVDGMPVL---PSAYAYNPLMHALCVRGQVRDALVLL 175

Query: 242 DS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           D+ L     PDV+ Y  L+   C+     +A  +   M++ G  P   TY++++D +CR 
Sbjct: 176 DNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCRE 235

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G +  A ++   +   GC PN++ +N +++    A R E V ++  +M    C     T 
Sbjct: 236 GDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATL 295

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
           + +I   C++G  + AI++L  M +  C  N  T+N +   + + G V+GA  +   M+ 
Sbjct: 296 SVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQT 355

Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
             C+PN  TYNIL++    ++  +    L  +M + +  P++ T+  +I   C  G    
Sbjct: 356 DGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQ 415

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           A +  ++M E+ C  P S  Y  V++ L + G++++  EL+ +M  +GF
Sbjct: 416 AVEVFKQMPEKGCC-PNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGF 463



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 186/399 (46%), Gaps = 44/399 (11%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ ++  A K R +  A   IDLM+      T  T+++++    R G    A  
Sbjct: 184 APDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARE 243

Query: 205 AFNRMEEYGCAPDKIAF-----------------------------------SIVISILC 229
             N +  YGC P+ + +                                   S+VIS LC
Sbjct: 244 LLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLC 303

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           ++     A    + + K     +++ Y  +V G C  G++  A  +   M+  G +PN++
Sbjct: 304 QEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIF 363

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+I++  LC   +   A D+ A+M +  C P+ +TFN ++    +   T + ++V+ QM
Sbjct: 364 TYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQM 423

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              GC  +++TY+ +I+   K GK+E ++++LN M  KG NP  + ++++  C+++   +
Sbjct: 424 PEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKL 482

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
             A +M  K++D    P  V YN ++     +  TD  + +   M  +   P+ +TY IL
Sbjct: 483 VEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSIL 542

Query: 469 ITMYCGMGHWNNAYKYI-----REMIEEKCLKPGSSVYE 502
           I      G+   A + +     R++I +  +K  +S+ +
Sbjct: 543 IQGLAHEGYMKEARELLSTLSSRDVIVDNLIKNDASLLD 581



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 155/320 (48%), Gaps = 6/320 (1%)

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCR 264
           A   +E   C PD    + ++  LCR+ R ++A    ++         + Y+ L  G+CR
Sbjct: 75  ALRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEACGSA--ATAVTYSALADGYCR 132

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA RV   M    + P+ Y Y+ ++ ALC  GQ+  A  +   ML  GC P+ +T
Sbjct: 133 VGRLDEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVT 189

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K     + +++ + M+  GC    +TYN ++D  C++G ++ A ++LNS+ 
Sbjct: 190 YNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLP 249

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC PN   +N + + +   G       +  +M    C P+  T ++++          
Sbjct: 250 SYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQ 309

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             ++L ++M +++   N+ TY  +++  C  GH + A   +  M  + C KP    Y ++
Sbjct: 310 RAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGC-KPNIFTYNIL 368

Query: 505 LQQLRRAGQLQKHEELVEKM 524
           ++ L  A + +  E+L+ KM
Sbjct: 369 VKGLCNAERWEDAEDLMAKM 388



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           + ++P L H +  + G+VR    A   +D M  R     V T++IL+    +     +A+
Sbjct: 153 YAYNP-LMHALC-VRGQVRD---ALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAM 207

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
              + M   GC P  + +++++  +CR+     A+   +SL      P+ + Y  +++G 
Sbjct: 208 ELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGL 267

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
             AG   + E +  EM      P+  T S+VI +LC+ G   RA  +  +M +  C  N 
Sbjct: 268 RTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANI 327

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           +T+N ++    +    +  L + + M+  GC+ +  TYN L+   C   + EDA  ++  
Sbjct: 328 VTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAK 387

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M +  C P+  TFN I   + + G    A  ++ +M +  C PN+VTY+ +++  A +  
Sbjct: 388 MSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGK 447

Query: 443 TDMVLKLKKEMEENEVEPNVN----------------------------------TYRIL 468
            +  L+L  EM      P +N                                   Y  +
Sbjct: 448 MEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTI 507

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +   C  G  + A   +  M+ + C+ P  S Y +++Q L   G +++  EL+  +  R
Sbjct: 508 LLGLCRNGKTDQAIDILSNMVSDGCM-PDESTYSILIQGLAHEGYMKEARELLSTLSSR 565



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 36/246 (14%)

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE--- 374
           C P+    N L+R   +  R     +V   ++  G  A  +TY+ L D +C+ G+L+   
Sbjct: 84  CPPDVALANRLVRDLCRRGRPADAARV---VEACGSAATAVTYSALADGYCRVGRLDEAR 140

Query: 375 -----------------------------DAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
                                        DA+ +L++M+ +GC P+  T+N++     K 
Sbjct: 141 RVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKG 200

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
                A  +   M+   C P  VTYN++M         D   +L   +      PN   Y
Sbjct: 201 RGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNY 260

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             ++      G W +  + I EM  E C  P  +   +V+  L + G  Q+   L+EKM 
Sbjct: 261 NTVLKGLRTAGRWEDVEELIAEMFSENC-PPSEATLSVVISSLCQEGLFQRAIRLLEKMS 319

Query: 526 DRGFTA 531
               TA
Sbjct: 320 KHDCTA 325


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 193/401 (48%), Gaps = 17/401 (4%)

Query: 146 HSPDLYHEMINLAGKVRQ---------------FDLAWHFIDLMKSRNVEITVDTFSILV 190
           H+  L  EM+   G + Q               FD A  FI  M  RN +      ++LV
Sbjct: 355 HAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLV 414

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FE 249
               + G  +EA+  + R+ E G A + +  + +I  LC      EA      + ++   
Sbjct: 415 SGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLV 474

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
            D I Y  L+   C+ G + E  ++  EM   GIQP++YTY++++  LC  G+I  A  +
Sbjct: 475 LDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGL 534

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           + E  + G  P++ T+  ++  + KA+R E+  +++ +M  +  E + + Y  LI  +C+
Sbjct: 535 WHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCE 594

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           +G + +A ++ + M  +G    ++T++ +   +S +G V+ A+++  +M+     PN V 
Sbjct: 595 NGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVC 654

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           Y  L+  +        V  + +EM  N V PN  TY I+I  +C +G+   A K + EM 
Sbjct: 655 YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEM- 713

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +K + P +  Y  +     + G++++  ++ + M   G +
Sbjct: 714 AQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGIS 754



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 170/358 (47%), Gaps = 2/358 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K  +  +++   D+M    V   V  FS +V  +   G   +A+  F +ME+ G AP+ +
Sbjct: 174 KANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVV 233

Query: 220 AFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++ +I  LC+  R  EA  F + + K++ +P ++ Y  L+ G  +     EA  + +EM
Sbjct: 234 TYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEM 293

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
              G  PN   Y+ +ID  CR G I+ A  +  +M+  G  PNS+T N+L++ + K+++ 
Sbjct: 294 SDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQM 353

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
           E    +  +M   G   +  T+  +I   C   + + A+  +  M+ +   PN     ++
Sbjct: 354 EHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLL 413

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
              + + G  + A  ++ ++ +     NTVT N L+     + S +   KL KEM E  +
Sbjct: 414 VSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGL 473

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
             +  +Y  LI   C  G     +K   EM+  + ++P    Y M+L  L   G++++
Sbjct: 474 VLDSISYNTLILACCKEGKVEEGFKLKEEMV-RRGIQPDMYTYNMLLHGLCNMGKIEE 530



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 1/285 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    K  + +  +   + M  R ++  + T+++L+      G   EA   ++  +
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  PD   + I+I   C+  R  E +  F  +   K E + +VY  L+R +C  GN+ 
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMR 599

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA R+  +M+  GI     TYS +I  L   G +  A+ +  EM + G  PN + +  L+
Sbjct: 600 EAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALI 659

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K  +  KV  +  +M       + ITY  +I+ HCK G ++ A K+LN M +KG  
Sbjct: 660 GGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIV 719

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           P+A T+N +     K G +  A ++   M       + +TY  L+
Sbjct: 720 PDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 1/304 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  M  R + +   +++ L+    + G   E       M   G  PD   +++++ 
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520

Query: 227 ILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   +  EA   +   K     PD   Y  ++ G+C+A  + E E++F+EM    I+ 
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N   Y  +I A C  G +  A  +  +M   G    S T+++L+         +   Q+ 
Sbjct: 581 NAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLL 640

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           ++M++ G   + + Y  LI  +CK G++     +L  M     +PN  T+ ++     KL
Sbjct: 641 DEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKL 700

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G++  A ++  +M      P+ VTYN L   F      +  LK+   M    +  +  TY
Sbjct: 701 GNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITY 760

Query: 466 RILI 469
             LI
Sbjct: 761 TTLI 764



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 137/274 (50%), Gaps = 1/274 (0%)

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+    +A  +  + +VF  M   G+ P+VY +S +++A C  G++  A ++F +M +VG
Sbjct: 168 LLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVG 227

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN +T+NN++    K  R ++  Q   +M++   +   +TY  LI+   K  + ++A 
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEAN 287

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            +L  M  +G  PN   +N +     ++G+++ A ++   M      PN+VT N L+Q +
Sbjct: 288 CILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGY 347

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
             S   +    L +EM       N  T+  +I   C    +++A  +I EM+     KP 
Sbjct: 348 CKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN-FKPN 406

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             +  +++  L + G+  +  EL  +++++GF A
Sbjct: 407 DGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAA 440



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 3/221 (1%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD Y   I + G  K  + +        M +  +E     +  L+R Y   G   EA   
Sbjct: 545 PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
            + M   G       +S +I  L        A    D + K+   P+V+ YT L+ G+C+
Sbjct: 605 RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + + + + +EM +  + PN  TY+I+I+  C+ G +  A  +  EM + G  P+++T
Sbjct: 665 LGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVT 724

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +N L     K  + E+ L+V + M   G   D ITY  LID
Sbjct: 725 YNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLID 765



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 1/221 (0%)

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           ++F+ +   G  P+  T N L+   VKA+  +   QV++ M   G   D   ++ +++  
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C  G+++DAI++   M + G  PN  T+N I   + K G ++ A +   KM+  + +P+ 
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           VTY +L+      +  D    + KEM +    PN   Y  LI  YC +G+ + A +   +
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           MI    + P S     ++Q   ++ Q++  E L+E+M+  G
Sbjct: 328 MISNG-ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 1/190 (0%)

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           V ++++ +   G      T NFL+    K  +++ + +V + M   G  P+   F+ +  
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
                G V+ A  ++ KM+ +   PN VTYN ++     +   D   + K++ME+  V+P
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           ++ TY +LI     +  ++ A   ++EM  ++   P + VY  ++    R G +    ++
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEM-SDRGYAPNNVVYNTLIDGYCRIGNISTALQI 324

Query: 521 VEKMVDRGFT 530
            + M+  G +
Sbjct: 325 RDDMISNGIS 334



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y  +I    K+ Q       +  M   NV     T++I++  + + G    A  
Sbjct: 649 SPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAK 708

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
             N M + G  PD + ++ + +  C++ +  EA    D +       D I YT L+ GW 
Sbjct: 709 LLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWH 768

Query: 264 RAGNISEAE 272
           +   +S  E
Sbjct: 769 KPLTVSSRE 777


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 168/328 (51%), Gaps = 2/328 (0%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
            + M + GCAPD I +++V++ +C++ R  +A  F ++L     EP+ + Y  +++G   
Sbjct: 4   LDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFT 63

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           A    +AE++  EM   G  PNV T++++I  LCR G +  A +V  ++ + GC PNS++
Sbjct: 64  AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLS 123

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L+    K  + +K +     M   GC  D ++YN L+   C++G+++ AI +L+ + 
Sbjct: 124 YNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLK 183

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            KGC+P   ++N +   ++K G    A  +  +M     +P+ +TY  +          +
Sbjct: 184 GKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIE 243

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             ++   ++++  + P V  Y  ++   C     +NA      MI   C+ P  S Y ++
Sbjct: 244 EAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCM-PNESTYTIL 302

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           ++ L   G +++  +L+ ++  RG   +
Sbjct: 303 VEGLAYEGLVKEARDLLGQLCSRGVVNK 330



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 141/280 (50%), Gaps = 3/280 (1%)

Query: 142 PEFVHSPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           P +   P+     I L G     +++ A   ++ M  +     V TF++L+    R GL 
Sbjct: 43  PSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLV 102

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
             A+    ++ +YGC P+ ++++ ++   C++++  +A +F + +  +   PD++ Y  L
Sbjct: 103 EPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTL 162

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +   CR G +  A  +  ++K  G  P + +Y+ VID L + G+   A ++  EM+  G 
Sbjct: 163 LTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGL 222

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
           +P+ IT+  +     +  + E+ ++ + +++ +G     + YN ++   CK  +  +AI 
Sbjct: 223 QPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAID 282

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           + + M+  GC PN ST+ ++   ++  G V  A  + G++
Sbjct: 283 LFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQL 322



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 145/295 (49%), Gaps = 3/295 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ ++N   +  + D A  F++ + S   E    +++I+++    A    +A  
Sbjct: 13  APDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEK 72

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               M   GC P+ + F+++IS LCR+     A    + + K    P+ + Y  L+  +C
Sbjct: 73  LMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFC 132

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   + +A      M   G  P++ +Y+ ++ ALCR G++  A D+  ++   GC P  I
Sbjct: 133 KQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLI 192

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++N ++    KA +T++ L++ ++M   G + D ITY  +    C++ K+E+AI+    +
Sbjct: 193 SYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKV 252

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
              G  P    +N I   + K  + + A  ++  M    C PN  TY IL++  A
Sbjct: 253 QDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLA 307



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 127/261 (48%), Gaps = 3/261 (1%)

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           ++  EM+  G  P++ TY++V++ +C+ G++  A +    +   G EPN++++N +++  
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
             A R E   ++  +M   GC  + +T+N LI   C+ G +E A++VL  + + GC PN+
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            ++N +     K   ++ A      M    C P+ V+YN L+     +   D+ + L  +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           ++     P + +Y  +I      G    A + + EMI  K L+P    Y  +   L R  
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMI-SKGLQPDIITYTTIASGLCRED 240

Query: 513 QLQKHEELVEKMVDRGFTARP 533
           ++++      K+ D G   RP
Sbjct: 241 KIEEAIRTFCKVQDMGI--RP 259



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 95/187 (50%), Gaps = 1/187 (0%)

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           +++ ++M+  GC  D ITYN +++  C++G+++DA++ L ++   G  PN  ++N++ + 
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +        A ++  +M    C PN VT+N+L+         +  +++ +++ +    PN
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
             +Y  L+  +C     + A  ++  M+   C  P    Y  +L  L R G++    +L+
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCY-PDIVSYNTLLTALCRNGEVDVAIDLL 179

Query: 522 EKMVDRG 528
            ++  +G
Sbjct: 180 HQLKGKG 186


>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
 gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
 gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
 gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 541

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 177/372 (47%), Gaps = 14/372 (3%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM----EEYGCAPDKI 219
           F  AW    L+        +  F+ LVRRY R G A  A+ AF  +    + Y    D  
Sbjct: 86  FAAAWRL--LLAPSPTPPPLAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIP 143

Query: 220 A----FSIVISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAE 272
           A     ++ +  LC++     A   F+  + +     PD   Y  L+ GW RAG + +  
Sbjct: 144 AAASLLNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVG 203

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +++ EM++AG++P V TY  +I+ LC   +  +A  +  EM E G E N +T N ++   
Sbjct: 204 KLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYAL 263

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +A R +   +V  +    G   +  T+N L+  +CK G L  A  VL  M  +G +P  
Sbjct: 264 AQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTT 323

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N  F   +K  DV      Y KM      P+ +TY +L++M + +   ++V+++ +E
Sbjct: 324 RTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQE 383

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M  +  EP++ T  +LI + C    +  A     +M  ++ + P    Y+ ++++L+R G
Sbjct: 384 MRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMF-KRGIVPQYITYQKLMRELKRLG 442

Query: 513 QLQKHEELVEKM 524
            +   ++L   M
Sbjct: 443 LVHLIQKLTNLM 454



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 46/325 (14%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMK------MAG--IQPNVYTYSIVIDALC--- 298
           P +  +  LVR + R G    A R F+ ++      MAG  I       ++ +DALC   
Sbjct: 101 PPLAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALCKEG 160

Query: 299 ----------------------------------RCGQITRAHDVFAEMLEVGCEPNSIT 324
                                             R G++ +   ++AEM   G  P  +T
Sbjct: 161 HPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVT 220

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+       R ++ + + ++M+  G EA+ +T N ++    + G+ +DA KVL    
Sbjct: 221 YGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFP 280

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  PN STFN +     K GD+ GA  +   M +    P T TYN     FA +   +
Sbjct: 281 LYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVE 340

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             +    +M  N   P+  TY +L+ M           + I+EM      +P  +   M+
Sbjct: 341 SGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEM-RTHGFEPDLATSTML 399

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGF 529
           +  L R  Q ++     E M  RG 
Sbjct: 400 IHLLCRRHQFEEACAEFEDMFKRGI 424



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 130/300 (43%), Gaps = 1/300 (0%)

Query: 123 RHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT 182
           + G P   V  F  W    P+       Y+ +++   +  + D        M+   V  T
Sbjct: 158 KEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPT 217

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T+  L+          +A+   + M E G   + +  + ++  L +  R  +A    +
Sbjct: 218 VVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLE 277

Query: 243 SLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
                   P++  + +LV G+C+ G+++ A  V + M   GI P   TY+       +  
Sbjct: 278 KFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNS 337

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +    + +++M+  G  P+ +T+  L+++  +A+R E V+Q+  +M+  G E D  T  
Sbjct: 338 DVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATST 397

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            LI   C+  + E+A      M ++G  P   T+  + R + +LG V+   ++   M+ +
Sbjct: 398 MLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVHLIQKLTNLMRSV 457


>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 727

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 196/410 (47%), Gaps = 14/410 (3%)

Query: 130 QVLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
           Q L+ F+ + AR +   SP    Y  +INL  K+ +   A  F   MK++ + +  +T+S
Sbjct: 281 QCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYS 340

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
           +LV  YV+ G  A A   F  M E G  PD + ++I++   C+ R+ + A      +K +
Sbjct: 341 MLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTR 400

Query: 248 F-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P +  Y  ++ G+ + G++  A +   EMK+AG +PN  TY++++  L + GQI RA
Sbjct: 401 GCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRA 460

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             V  EM   G +PN  ++  LM+            +   ++  +  +   I+Y  L+  
Sbjct: 461 ASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKA 520

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK G++++AI V   M   G   N   FN +    ++ GD+  A+ +  KM+     P+
Sbjct: 521 CCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPD 580

Query: 427 TVTYNILMQMFATSKSTDM--VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
             +Y   +   A  K+ DM    +  +EM++ +++PN+ TY ILI  +  + H   A   
Sbjct: 581 IHSYTSFVN--ACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALIC 638

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE------ELVEKMVDRG 528
             EM +   L P   +Y  ++  L     + +        ++  +MVD+G
Sbjct: 639 YDEM-KAAGLIPDKPLYYCIVTSLLSKAAIARETVRNGVLQVTSEMVDQG 687



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 180/394 (45%), Gaps = 40/394 (10%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M++  ++ +V  ++ L+R Y+ A     AV     ME  G  P+   FS +IS       
Sbjct: 149 MRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGN 208

Query: 234 ASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A+ +F  S+ + +  +V +Y++++  +C+AGN+  AE +  +M+  G++  +  Y+I
Sbjct: 209 VEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNI 268

Query: 293 VIDALCRCGQITRAHDVFAEM---LEVGCEPNSITFNNLMRVHVKASRTEKVLQ------ 343
           ++D   RC    +  +VF ++   ++ G  P ++T+  L+ ++ K  +  K L+      
Sbjct: 269 LMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMK 328

Query: 344 -----------------------------VYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
                                        V+  M   G E D +TYN L+   CK  ++ 
Sbjct: 329 AQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMT 388

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            AI++L  M  +GC+P   T+  I     K GDV  A++   +MK   C PN  TYN++M
Sbjct: 389 RAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIM 448

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                    D    +  EME   V+PN  +Y  L+  +  +G    A+K ++  + E   
Sbjct: 449 HNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKR-VNEITQ 507

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           KP    Y  +L+   +AG++Q    + E+M   G
Sbjct: 508 KPPIISYASLLKACCKAGRMQNAIAVTEEMAFAG 541



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 168/359 (46%), Gaps = 5/359 (1%)

Query: 176 SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
           S N    V  +S ++  Y +AG    A      MEE G       ++I++    R    +
Sbjct: 221 SENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEA 280

Query: 236 EAQSFFDSLKDKFE----PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
           +  + F  LK + +    P  + Y  L+  + + G + +A    +EMK  GI  N  TYS
Sbjct: 281 QCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYS 340

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           +++D   + G    A  VF +M E G EP+ +T+N L++   K+ +  + +Q+  +MK  
Sbjct: 341 MLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTR 400

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           GC     TY  +ID   K G +  A K ++ M   GC PNA+T+N+I   + +LG ++ A
Sbjct: 401 GCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRA 460

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
             +  +M+    +PN  +Y  LMQ FA+     +  K  K + E   +P + +Y  L+  
Sbjct: 461 ASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKA 520

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            C  G   NA     EM     +   + ++  +L    + G + +   +++KM   GFT
Sbjct: 521 CCKAGRMQNAIAVTEEMAFAG-VPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFT 578



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 165/363 (45%), Gaps = 44/363 (12%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           + V+AF R+++   A ++  ++++I    ++     A+  F+ ++    +  V  Y NL+
Sbjct: 110 KVVNAFKRIDK---AVER-DYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLI 165

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYT------------------------------ 289
           R +  A N+  A     EM++ GI PN  T                              
Sbjct: 166 RAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWN 225

Query: 290 -----YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                YS +I A C+ G + RA  + A+M E G E     +N LM  + +     + L V
Sbjct: 226 HNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNV 285

Query: 345 YNQMKR---LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           ++++K     G     +TY  LI+ + K GK+  A++    M  +G   N +T++M+   
Sbjct: 286 FHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDG 345

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             +LGD   A  ++  M +   EP+ VTYNIL++ F  S+     ++L   M+     P 
Sbjct: 346 YVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPT 405

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           + TY  +I  +   G    AYK + EM    C +P ++ Y +++  L + GQ+ +   ++
Sbjct: 406 IQTYITIIDGFMKTGDVRMAYKTVSEMKLAGC-RPNATTYNVIMHNLVQLGQIDRAASVI 464

Query: 522 EKM 524
           ++M
Sbjct: 465 DEM 467



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           + ++     K GD  GA   + KM+    + +   YN L++ +  +++    +   +EME
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              + PN  T+  +I+ Y   G+   A K+ +  + E       ++Y  ++    +AG +
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSEN-WNHNVAIYSSIIHAYCKAGNM 244

Query: 515 QKHEELVEKMVDRGFTA 531
           ++ E LV  M ++G  A
Sbjct: 245 ERAEALVADMEEQGLEA 261


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L+V S  N +   P    SP   + ++ L  + R  D A   ++ M  +   +   +F+I
Sbjct: 441 LEVYSVMNKIGLVPS---SPTFNYLIMGLCNQGR-LDDAQLLLEHMICKGYCVGT-SFTI 495

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDK 247
            +  Y R+G    A+  ++ M + G  PD IAFS  IS LCR    +EA Q+F +     
Sbjct: 496 YMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRG 555

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           F P+ I Y +L+  +CR G +SEA ++ ++M+ +G+ P+V+T +I+ID  C+ G++   +
Sbjct: 556 FVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMN 615

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
             F +M   G  P+ +T+N ++  +  A      +   N+M   GCE D  TYN  +   
Sbjct: 616 KRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSL 675

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV-NGAHRMYGKMKDLKCEPN 426
           C +  L  A+K+L+ +V  GC PN+ T+N +   I    DV + A  + GK+  +  +PN
Sbjct: 676 CNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICS--DVLDRAMILTGKLIKMAFQPN 733

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
           TVT N+    F         L   ++++E+ V  +  T  IL   Y
Sbjct: 734 TVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNILDWAY 779



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 143/311 (45%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D AW  +     + V ++V  F+ LV  Y + G   +A+  ++ M + G  P    F+
Sbjct: 401 RLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFN 460

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
            +I  LC + R  +AQ   + +  K       +T  +  + R+GN+  A + + +M   G
Sbjct: 461 YLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVG 520

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           +QP+   +S  I  LCR   +  A+  F EM   G  PN+IT+N+L+    +     + L
Sbjct: 521 VQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEAL 580

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           ++  +M++ G   D  T N LID  CK+G+L+   K    M   G  P+  T+N I    
Sbjct: 581 KLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAY 640

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
               D++ A     KM    CEP+  TYNI M     +   +  +K+  E+      PN 
Sbjct: 641 CGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNS 700

Query: 463 NTYRILITMYC 473
            TY  L+   C
Sbjct: 701 VTYNTLMDGIC 711



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 166/419 (39%), Gaps = 72/419 (17%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           ++   + L+R   RAG    A   F  M   G  P    F+ +I   C +          
Sbjct: 174 SLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLL 233

Query: 242 DSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
             + +    PD   Y  L++G+   G   +A ++  EM+ +G QP V TY+I+++ LC  
Sbjct: 234 GVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHD 293

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
           G +  A  +F EM++VG E N+ITFN L+  + KA R ++      +MK  G   D  T+
Sbjct: 294 GNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTF 353

Query: 361 NFL-----------------------------------IDCH-CKDGKLEDAIKVLNSMV 384
           N L                                   + C  C DG+L+DA K++ S +
Sbjct: 354 NILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAI 413

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN------------- 431
            +G   + + FN +    SK G    A  +Y  M  +   P++ T+N             
Sbjct: 414 EQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLD 473

Query: 432 ---------------------ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
                                I M  +  S + +  LK   +M +  V+P+   +   I+
Sbjct: 474 DAQLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYIS 533

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             C + H N AY+   EM   +   P +  Y  ++    R G + +  +L +KM   G 
Sbjct: 534 GLCRLDHVNEAYQAFVEM-TGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGL 591



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 173/381 (45%), Gaps = 6/381 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +++   K  + D A+     MK+R +     TF+IL     + G A +  H    + 
Sbjct: 318 FNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELH 377

Query: 211 E-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNI 268
           E +G      +  +V+  LC   R  +A     S  ++  P  V  +  LV  + + G  
Sbjct: 378 EMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFD 437

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNN 327
            +A  V+  M   G+ P+  T++ +I  LC  G++  A  +   M+  G C   S T   
Sbjct: 438 EQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSFTI-- 495

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
            M  + ++   E  L+ ++ M ++G + D I ++  I   C+   + +A +    M  +G
Sbjct: 496 YMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRG 555

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN  T+N +     ++G V+ A ++  KM+     P+  T NIL+  F      DM+ 
Sbjct: 556 FVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMN 615

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           K   +M  + + P+V TY  +I  YCG    ++A  ++ +M+ + C +P    Y + +  
Sbjct: 616 KRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGC-EPDIFTYNIWMHS 674

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
           L     L +  ++++++V  G
Sbjct: 675 LCNNHLLNRAVKMLDELVAMG 695



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 138/316 (43%), Gaps = 37/316 (11%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P +     L+R   RAG +  A +VF EM   G +P++  ++ +I   C  G +     +
Sbjct: 173 PSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGL 232

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M      P++ ++N L++ +    +     Q+ ++M+  GC+   +TYN L++  C 
Sbjct: 233 LGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCH 292

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           DG + DA ++ + MV+ G   N  TFN++    +K G ++ A+    +MK     P+  T
Sbjct: 293 DGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCT 352

Query: 430 YNILM--------------------QMFA---TSKSTDMVL-------------KLKKEM 453
           +NIL                     +MF    ++ S DMV+             KL    
Sbjct: 353 FNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSA 412

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
            E  V  +V  +  L+  Y   G    A + +  ++ +  L P S  +  ++  L   G+
Sbjct: 413 IEQGVPVSVAGFNALVAAYSKEGFDEQALE-VYSVMNKIGLVPSSPTFNYLIMGLCNQGR 471

Query: 514 LQKHEELVEKMVDRGF 529
           L   + L+E M+ +G+
Sbjct: 472 LDDAQLLLEHMICKGY 487



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 19/274 (6%)

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
            WC +   S +    R    A +   + + ++V+ A  RCG               G  P
Sbjct: 129 AWCSSDRSSGSYSALRLALHAFLAAGMASEALVVLAHIRCG---------------GNTP 173

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +      L+R+  +A       +V+ +M   G       +N +I   C  G +   + +L
Sbjct: 174 SLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLL 233

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M R    P+A ++N++ +  S  G    A ++  +M++  C+P  VTYNIL+ +    
Sbjct: 234 GVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHD 293

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
            +     +L  EM +  +E N  T+ +L+  Y   G  + AY   REM + + L P    
Sbjct: 294 GNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREM-KARGLVPDCCT 352

Query: 501 YEMV---LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           + ++     +  +A QL   ++ + +M     +A
Sbjct: 353 FNILSAGAYKFGKAVQLAHGQQELHEMFGSRISA 386


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 191/416 (45%), Gaps = 40/416 (9%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV------ 203
           LY+  I+  GKV + D+AW F   +KS+ +     TF+ ++    +A    EAV      
Sbjct: 274 LYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEEL 333

Query: 204 ---------HAFNRM-----------EEY---------GCAPDKIAFSIVISILCRKRRA 234
                    +A+N M           E Y         GC P  IA++ +++ L RK + 
Sbjct: 334 DSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKV 393

Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
            EA    +++K    P++  Y  L+   C+AG +  A +V   MK AG+ PN+ T +I+I
Sbjct: 394 EEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMI 453

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           D LC+  ++  A  +F  +    C P+S+TF +L+    +  +      +Y +M   G  
Sbjct: 454 DRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQT 513

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            + + Y  LI    K G+ ED  K+   M+ +GC+P+    N    C+ K G++     +
Sbjct: 514 PNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRAL 573

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + ++K     P+  +Y+IL+        +    KL  EM+E  +  +   Y I+I  +C 
Sbjct: 574 FEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCK 633

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK----HEELVEKMVD 526
            G  N AY+ + EM + K L+P    Y  V+  L +  +L +     EE   K VD
Sbjct: 634 SGKVNKAYQLLEEM-KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVD 688



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 182/376 (48%), Gaps = 9/376 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++   G+  + + A   ++ MK  +    + +++IL+    +AG    A+   + M+
Sbjct: 380 YNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMK 438

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
           E G  P+ I  +I+I  LC+ +R  EA S F  L  K   PD + + +L+ G  R G ++
Sbjct: 439 EAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVN 498

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  ++ +M  +G  PN   Y+ +I    +CG+    H ++ EM+  GC P+ +  NN M
Sbjct: 499 DAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYM 558

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               KA   EK   ++ ++K  G   D  +Y+ LI    K G  +D  K+   M  +G +
Sbjct: 559 DCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLH 618

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
            +   +N++     K G VN A+++  +MK    +P  VTY  ++   A     D    L
Sbjct: 619 LDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYML 678

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
            +E +   V+ NV  Y  LI  +  +G  + AY  + E++ +K L P +  +  +L  L 
Sbjct: 679 FEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM-QKGLTPNTYTWNCLLDALV 737

Query: 510 RAGQLQKHEELVEKMV 525
           +A      EE+ E +V
Sbjct: 738 KA------EEIDEALV 747



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 191/423 (45%), Gaps = 9/423 (2%)

Query: 109 PSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAW 168
           P  V  VI +   VR        L +F WV  + + +HSP+ Y+ ++ L  + R  +   
Sbjct: 99  PELVVGVIRRLKDVR------VALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLE 152

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
             ++ M       + +T   +V  +V++    EA      M ++   P   A++ +I  L
Sbjct: 153 QILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGAL 212

Query: 229 CRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
                A    +    +++  +E  V ++T L+  + R G +  A  +  EMK      ++
Sbjct: 213 SAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADL 272

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             Y++ ID   + G++  A   F E+   G  P+ +TF +++ V  KA R ++ ++++ +
Sbjct: 273 VLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEE 332

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           +           YN +I  +   GK  +A  +L    RKGC P+   +N I  C+ + G 
Sbjct: 333 LDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGK 392

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V  A R+   MK +   PN  +YNIL+ M   +   +  LK++  M+E  + PN+ T  I
Sbjct: 393 VEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNI 451

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           +I   C     + A   I   ++ K   P S  +  ++  L R G++     L EKM+D 
Sbjct: 452 MIDRLCKAQRLDEACS-IFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDS 510

Query: 528 GFT 530
           G T
Sbjct: 511 GQT 513



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 197/420 (46%), Gaps = 39/420 (9%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +P+L  Y+ +I++  K  + + A    D MK   +   + T +I++ R  +A    EA  
Sbjct: 408 APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACS 467

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWC 263
            F  ++   C PD + F  +I  L R  + ++A   ++ + D  + P+ +VYT+L+R + 
Sbjct: 468 IFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFF 527

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G   +  ++++EM   G  P++   +  +D + + G+I +   +F E+   G  P+  
Sbjct: 528 KCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVR 587

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +++ L+   VK   ++   +++ +MK  G   DT  YN +ID  CK GK+  A ++L  M
Sbjct: 588 SYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEM 647

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK----DLKC---------------- 423
             KG  P   T+  +   ++K+  ++ A+ ++ + K    DL                  
Sbjct: 648 KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRI 707

Query: 424 ---------------EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
                           PNT T+N L+     ++  D  L   + M+  +  PN  TY I+
Sbjct: 708 DEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIM 767

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +   C +  +N A+ + +EM +++ LKP +  Y  ++  L R G + + ++L E+    G
Sbjct: 768 VNGLCKVRKFNKAFVFWQEM-QKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSG 826



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 188/387 (48%), Gaps = 4/387 (1%)

Query: 145 VHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           V +PD   +  +I+  G+  + + A+   + M           ++ L+R + + G   + 
Sbjct: 476 VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDG 535

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG 261
              +  M   GC+PD +  +  +  + +     + ++ F+ +K +   PDV  Y+ L+ G
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             + G   +  ++F EMK  G+  +   Y+IVID  C+ G++ +A+ +  EM   G +P 
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T+ +++    K  R ++   ++ + K    + + + Y+ LID   K G++++A  +L 
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            +++KG  PN  T+N +   + K  +++ A   +  MK+LKC PN VTY+I++      +
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR 775

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             +      +EM++  ++PN  TY  +I+    +G+   A K + E  +     P S+ Y
Sbjct: 776 KFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEA-KDLFERFKSSGGIPDSACY 834

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
             +++ L  A +      L E+   +G
Sbjct: 835 NAMIEGLSNANKAMDAYILFEETRLKG 861



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 127/262 (48%), Gaps = 1/262 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK + + +    ++I++  + ++G   +A      M+  G  P  + +  VI  L +  R
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDR 671

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA   F+  K K  + +V+VY++L+ G+ + G I EA  +  E+   G+ PN YT++ 
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++DAL +  +I  A   F  M  + C PN +T++ ++    K  +  K    + +M++ G
Sbjct: 732 LLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG 791

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            + +TITY  +I    + G + +A  +       G  P+++ +N +   +S       A+
Sbjct: 792 LKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAY 851

Query: 413 RMYGKMKDLKCEPNTVTYNILM 434
            ++ + +   C   + T  +L+
Sbjct: 852 ILFEETRLKGCRIYSKTCVVLL 873



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 173/383 (45%), Gaps = 23/383 (6%)

Query: 148 PDLYHEMINLAGKVRQF-DLAWHFID-LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P++Y ++     KV  F D A H  D  +KS  +  TV     ++  Y       +A++ 
Sbjct: 38  PEMYGKV-----KVNSFVDDASHSQDNALKSEGMRKTVHDVCRVLDTYPWGAALEDALNT 92

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE----PDVIVYTNLVRG 261
           F+ M +    P+     +V+ ++ R +    A  +F  ++ K +    P+   Y  L+  
Sbjct: 93  FDEMPQ----PE-----LVVGVIRRLKDVRVALHYFRWVERKTKQLHSPEA--YNALLML 141

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             R  N+   E++  EM MAG  P+  T   ++ +  +  ++  A  V   M +    P 
Sbjct: 142 MARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPA 201

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
              +  L+     A   + +L +  QM+ +G E     +  LI    ++G+++ A+ +L+
Sbjct: 202 YSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLD 261

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M     N +   +N+   C  K+G V+ A + + ++K     P+ VT+  ++ +   ++
Sbjct: 262 EMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAE 321

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             D  ++L +E++ N+  P V  Y  +I  Y  +G +N AY  +     + C+ P    Y
Sbjct: 322 RVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCI-PSVIAY 380

Query: 502 EMVLQQLRRAGQLQKHEELVEKM 524
             +L  L R G++++   ++E M
Sbjct: 381 NCILTCLGRKGKVEEALRILEAM 403



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 2/245 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K+ + D A+   +  KS+ V++ V  +S L+  + + G   EA      + 
Sbjct: 659 YGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM 718

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ ++  L +     EA   F ++K+ K  P+ + Y+ +V G C+    +
Sbjct: 719 QKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFN 778

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   ++EM+  G++PN  TY+ +I  L R G +  A D+F      G  P+S  +N ++
Sbjct: 779 KAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                A++      ++ + +  GC   + T   L+D   K   LE A  ++ +++R+   
Sbjct: 839 EGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA-AIVGAVLREMAK 897

Query: 390 PNAST 394
              +T
Sbjct: 898 SQHAT 902



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+  GKV + D A+  ++ +  + +     T++ L+   V+A    EA+  F  M
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
           +   C P+++ +SI+++ LC+ R+ ++A  F+  + K   +P+ I YT ++ G  R GN+
Sbjct: 753 KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNV 812

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA+ +F   K +G  P+   Y+ +I+ L    +   A+ +F E    GC   S T   L
Sbjct: 813 LEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVL 872

Query: 329 MRVHVKASRTEK 340
           +    KA   E+
Sbjct: 873 LDALHKADCLEQ 884


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 206/476 (43%), Gaps = 55/476 (11%)

Query: 99  SQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSP---DLYHEMI 155
           S+ + +  I  +    VI++    +HG      L FF+W +  P    SP     Y  ++
Sbjct: 49  SRFAESQIIVSNVAHFVIDRIHNPQHG------LYFFHWASTLP--FSSPLNNVAYSSLL 100

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYGC 214
            L  K R F      ++ MK+RN + T++  + ++  Y   G   +AV  F  + E Y C
Sbjct: 101 KLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNC 160

Query: 215 APDKIA---------------------------------------FSIVISI--LCRKRR 233
            P  +A                                       +SIVI +  LC   +
Sbjct: 161 FPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGK 220

Query: 234 ASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             E +   D    +   P+V+ Y  ++ G+C+ G++  A RVF E+K+ G  P + TY  
Sbjct: 221 VEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGA 280

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID  C+ G+      +  EM  +G   N   FN+++    K    +K  ++   M  +G
Sbjct: 281 LIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMG 340

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
           CE D  TYN LI+  C  G++++A + L     +   PN  ++  +     K GD   A 
Sbjct: 341 CEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMAS 400

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            M  K+ +   +P+ V+Y   +         D+ L ++++M E  V P+   Y +L++  
Sbjct: 401 DMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGL 460

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  G +  A   + EM++   L+P + +Y  ++    R  +L K  EL E ++ +G
Sbjct: 461 CKKGRFPAAKLLLSEMLDLN-LQPDAYMYATLVDGFIRNNELDKATELFEVVMSKG 515



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 174/401 (43%), Gaps = 37/401 (9%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+ + + Y  +I+   K  +F +    ++ M    + + V  F+ ++    + GL  +A 
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAA 330

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD------KF--------- 248
                M E GC PD   ++I+I+  C   R  EA+ F +  K+      KF         
Sbjct: 331 EMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAY 390

Query: 249 ---------------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
                                +PD++ Y   + G    G I  A  V  +M   G+ P+ 
Sbjct: 391 CKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDA 450

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             Y++++  LC+ G+   A  + +EML++  +P++  +  L+   ++ +  +K  +++  
Sbjct: 451 QIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEV 510

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           +   G +   + YN +I   CK GK+ DA+  +N M      P+  T + +     K  D
Sbjct: 511 VMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHD 570

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           ++ A +M+G+M   K +PN V Y  L+  F          K+ + M+   +EPNV TY I
Sbjct: 571 LDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTI 630

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           LI  +   G    A  +   M+   CL P  + +  ++  L
Sbjct: 631 LIGGFSKTGKPEKAASFFELMLMNNCL-PNDTTFHYLINGL 670



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 157/379 (41%), Gaps = 42/379 (11%)

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRN----VEITVDTFSIL--VRRYVRAGLAAEAVHA 205
           + ++N   K  + D+A    D M  R     +++ VD +SI+  V+     G   E    
Sbjct: 168 NSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKL 227

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
            +     GC P+ + ++++I   C+K     A   F+ LK K F P +  Y  L+ G+C+
Sbjct: 228 IDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCK 287

Query: 265 AGNISEAERVFREMKMAGI-----------------------------------QPNVYT 289
           AG     +++  EM + G+                                   +P++ T
Sbjct: 288 AGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITT 347

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           Y+I+I+  C  G+I  A +      E    PN  ++  LM  + K         +  ++ 
Sbjct: 348 YNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIA 407

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G + D ++Y   I      G+++ A+ V   M+ KG  P+A  +N++   + K G   
Sbjct: 408 ETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFP 467

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  +  +M DL  +P+   Y  L+  F  +   D   +L + +    ++P V  Y ++I
Sbjct: 468 AAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMI 527

Query: 470 TMYCGMGHWNNAYKYIREM 488
              C  G   +A  Y+ +M
Sbjct: 528 KGLCKCGKMTDAVSYVNKM 546



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 156/354 (44%), Gaps = 22/354 (6%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           ++   +   V  G    A+    +M E G  PD   +++++S LC+K R   A+     +
Sbjct: 417 SYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEM 476

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            D   +PD  +Y  LV G+ R   + +A  +F  +   GI P V  Y+++I  LC+CG++
Sbjct: 477 LDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKM 536

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           T A     +M      P+  T + ++  +VK    +  L+++ QM +   + + + Y  L
Sbjct: 537 TDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSL 596

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK   +  A KV  +M      PN  T+ ++    SK G    A   +  M    C
Sbjct: 597 INGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNC 656

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV------------EPNVNTYRILITM 471
            PN  T++ L+       +T ++++  +E + + +               + TY  +I  
Sbjct: 657 LPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVC 716

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPG----SSVYEMVLQQLRRAGQLQKHEELV 521
            C  G  + A     ++++ K L+ G    S  +  +L  L + G+ ++   ++
Sbjct: 717 LCKHGMVDTA-----QLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNII 765



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 50/275 (18%)

Query: 148 PDLYHEMINLAGKVR--QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD Y     + G +R  + D A    +++ S+ ++  V  ++++++   + G   +AV  
Sbjct: 483 PDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSY 542

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
            N+M+    APD+   S VI    ++     A   F  + K K++P+V+ YT+L+ G+C+
Sbjct: 543 VNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCK 602

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH----------------- 307
             ++S AE+VFR M+   ++PNV TY+I+I    + G+  +A                  
Sbjct: 603 IADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTT 662

Query: 308 ------------------------------DVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
                                         D FA M+  G      T+N+++    K   
Sbjct: 663 FHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGM 722

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
            +    +  +M R G   D++ ++ L+   C+ GK
Sbjct: 723 VDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGK 757


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 217/452 (48%), Gaps = 35/452 (7%)

Query: 106 SISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--YHEMINLAGKV 161
            ISP+ V +  ++   C + H   L +  S  N +  +     +PD+  ++ +I+  GK 
Sbjct: 233 GISPNVVTYNALVYGFCIMGH---LKEAFSLLNEMKLKNI---NPDVCTFNTLIDALGKE 286

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
            +   A   + +M    ++  V T++ L+  Y        A + F  M + G  P+   +
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + +I  LC+++   EA S F+ +K K   PD++ YT+L+ G C+  ++  A  + ++MK 
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            GIQP+VY+Y+I++DALC+ G++  A + F  +L  G   N  T+N ++    KA    +
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGE 466

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN----------- 389
            + + ++M+  GC  D IT+  +I    +  + + A K+L  M+ +G             
Sbjct: 467 AMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAK 526

Query: 390 ------------PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
                       P+  T+  +      + ++  A  ++  M  +   PN   Y I++   
Sbjct: 527 IVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGL 586

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
              K+ D  + L +EM+   + PN+ TY  LI   C   H   A   ++EM +E  ++P 
Sbjct: 587 CKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEM-KEHGIQPD 645

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              Y ++L  L ++G+L+  +E+ ++++ +G+
Sbjct: 646 VYSYTILLDGLCKSGRLEGAKEIFQRLLVKGY 677



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 150/332 (45%), Gaps = 26/332 (7%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+Y   I L    K  + + A  F   +  +   + V T+++++    +A L  EA+  
Sbjct: 411 PDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDL 470

Query: 206 FNRMEEYGCAPDKIAFSIVISIL-----------------------CRKRRASEAQSFFD 242
            ++ME  GC PD I F  +I  L                        RK R  EA+    
Sbjct: 471 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLA 530

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            + K   +PDV+ Y  L+ G+     +  A+ VF  M   G+ PNV  Y+I+ID LC+  
Sbjct: 531 VMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +  A  +F EM      PN +T+ +L+    K    E+ + +  +MK  G + D  +Y 
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYT 650

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            L+D  CK G+LE A ++   ++ KG + N   +  +   + K G  + A  +  KM+D 
Sbjct: 651 ILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDK 710

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
            C P+ VT++I++         D   K+  EM
Sbjct: 711 GCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 163/346 (47%), Gaps = 2/346 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T +IL+  +        A      + + G  P+ I  + +I  LC +    +A  F D +
Sbjct: 100 TLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQV 159

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
               F+ + + Y  L+ G C+ G      R+ R+++   ++P+V  Y+ +I +LC+   +
Sbjct: 160 VAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLL 219

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A D+++EM+  G  PN +T+N L+         ++   + N+MK      D  T+N L
Sbjct: 220 GDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTL 279

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID   K+GK++ A  VL  M++    P+  T+N +      L  V  A  ++  M     
Sbjct: 280 IDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGV 339

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN  TY  ++      K  D  + L +EM+   + P++ TY  LI   C   H   A  
Sbjct: 340 TPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIA 399

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             ++M +E+ ++P    Y ++L  L + G+L+  +E  ++++ +G+
Sbjct: 400 LCKKM-KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGY 444



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 172/364 (47%), Gaps = 2/364 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A +F D + ++  ++   ++  L+    + G          ++E +   PD + ++ +I 
Sbjct: 152 ALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIH 211

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC+ +   +A   +  +  K   P+V+ Y  LV G+C  G++ EA  +  EMK+  I P
Sbjct: 212 SLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINP 271

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V T++ +IDAL + G++  A  V A M++   +P+ +T+N+L+  +   ++ +    V+
Sbjct: 272 DVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVF 331

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M + G   +  TY  +ID  CK+  +++A+ +   M  K   P+  T+  +   + K 
Sbjct: 332 YSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKN 391

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
             +  A  +  KMK+   +P+  +Y IL+         +   +  + +       NV TY
Sbjct: 392 HHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTY 451

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            ++I   C    +  A     +M  + C+ P +  ++ ++  L    +  K E+++ +M+
Sbjct: 452 NVMINGLCKADLFGEAMDLKSKMEGKGCM-PDAITFKTIICALFEKDENDKAEKILREMI 510

Query: 526 DRGF 529
            RG 
Sbjct: 511 ARGL 514



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 196/448 (43%), Gaps = 29/448 (6%)

Query: 101 ISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGK 160
           ++    ++  + R +I   C       + ++L      + +P+ V    +Y+ +I+   K
Sbjct: 160 VAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVV----MYNTIIHSLCK 215

Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
            +    A      M  + +   V T++ LV  +   G   EA    N M+     PD   
Sbjct: 216 NKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCT 275

Query: 221 FSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
           F+ +I  L ++ +   A+     + K   +PDV+ Y +L+ G+     +  A+ VF  M 
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA 335

Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
            +G+ PNV TY+ +ID LC+   +  A  +F EM      P+ +T+ +L+    K    E
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLE 395

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           + + +  +MK  G + D  +Y  L+D  CK G+LE+A +    ++ KG + N  T+N++ 
Sbjct: 396 RAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMI 455

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTY-----------------NILMQMFATSKS 442
             + K      A  +  KM+   C P+ +T+                  IL +M A    
Sbjct: 456 NGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515

Query: 443 TDMVLKLKKE------MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
               ++LK+       M +  ++P+V TY  L+  Y  +    +A KY+   + +  + P
Sbjct: 516 EARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHA-KYVFYSMAQMGVTP 574

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKM 524
               Y +++  L +   + +   L E+M
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEM 602



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 175/385 (45%), Gaps = 4/385 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PDL   + ++N    +     A+  +  +  R       T + L++     G   +A++
Sbjct: 95  TPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALY 154

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWC 263
             +++   G   +++++  +I+ LC+             L+    +PDV++Y  ++   C
Sbjct: 155 FHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLC 214

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   + +A  ++ EM + GI PNV TY+ ++   C  G +  A  +  EM      P+  
Sbjct: 215 KNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVC 274

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN L+    K  + +    V   M +   + D +TYN LID +    K+++A  V  SM
Sbjct: 275 TFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            + G  PN  T+  +   + K   V+ A  ++ +MK     P+ VTY  L+     +   
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHL 394

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           +  + L K+M+E  ++P+V +Y IL+   C  G   NA ++ + ++  K        Y +
Sbjct: 395 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLL-VKGYHLNVQTYNV 453

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++  L +A    +  +L  KM  +G
Sbjct: 454 MINGLCKADLFGEAMDLKSKMEGKG 478



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 36/242 (14%)

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           +F++ +  G  P++ T +I+++  C    IT A  V A +L+ G  PN+IT N       
Sbjct: 85  LFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNT------ 138

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
                                        LI   C  G+++ A+   + +V +G   N  
Sbjct: 139 -----------------------------LIKGLCFRGEIKKALYFHDQVVAQGFQLNQV 169

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           ++  +   + K G+     R+  K++    +P+ V YN ++     +K       L  EM
Sbjct: 170 SYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229

Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
               + PNV TY  L+  +C MGH   A+  + EM + K + P    +  ++  L + G+
Sbjct: 230 IVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM-KLKNINPDVCTFNTLIDALGKEGK 288

Query: 514 LQ 515
           ++
Sbjct: 289 MK 290


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 209/493 (42%), Gaps = 62/493 (12%)

Query: 97  GFSQISTAHSISPS-TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMI 155
           G+S+      I PS T RHV +        +P   +LSFFN + +RP F H+   Y  M+
Sbjct: 67  GYSENPRLKRILPSLTPRHVSKLITLNPLCLPPSSLLSFFNHLASRPPFRHTLHSYCTML 126

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDT----------------------FSILVRRY 193
           +     R    A   +  + SR    +  T                      F  L+  Y
Sbjct: 127 HFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAY 186

Query: 194 VRAGLAAEAVHAFNRMEE-------YGCA-----------------------------PD 217
           V +G   +AV  F  + +        GC                              P 
Sbjct: 187 VDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPP 246

Query: 218 KIAF-SIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
           KI F ++++   C+      A+  FD + K    P V+ +  L+ G C++G++ E  R+ 
Sbjct: 247 KIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLK 306

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
             M+  G+ P+V+T+S +I+ LC+ G++     +F EM   G  PN +TF  L+    K 
Sbjct: 307 GVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKG 366

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
            + +  L+ +  M   G   D +TYN LI+  CK G L++A +++N M   G  P+  TF
Sbjct: 367 GKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITF 426

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
             +     K GD+  A  +  +M +   E + V +  L+             ++  +M  
Sbjct: 427 TTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLS 486

Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
              +P+  TY ++I  +C  G     +K ++EM  +  + PG   Y  ++  L + GQ++
Sbjct: 487 AGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHV-PGVVTYNALMNGLCKQGQMK 545

Query: 516 KHEELVEKMVDRG 528
             + L++ M++ G
Sbjct: 546 NAKMLLDAMLNVG 558



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 2/329 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           F++L+  + +AG    A   F+ + + G  P  ++F+ +IS  C+     E       ++
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310

Query: 246 -DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
            +   PDV  ++ L+ G C+ G + E   +F EM   G+ PN  T++ +ID  C+ G++ 
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A   F  ML  G  P+ +T+N L+    K    ++  ++ N+M   G + D IT+  LI
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  CKDG +E A+++   MV +G   +   F  +   + + G V+ A RM   M     +
Sbjct: 431 DGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFK 490

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           P+  TY +++  F       M  KL KEM+ +   P V TY  L+   C  G   NA   
Sbjct: 491 PDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKML 550

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           +  M+    + P    Y ++L    + G 
Sbjct: 551 LDAMLNVG-VAPNDITYNILLDGHSKHGS 578



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 3/262 (1%)

Query: 148 PDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD++    +IN   K  + D      D M  R +     TF+ L+    + G    A+  
Sbjct: 316 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKN 375

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
           F  M   G  PD + ++ +I+ LC+     EA+   + +     +PD I +T L+ G C+
Sbjct: 376 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCK 435

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G++  A  + R M   GI+ +   ++ +I  LCR G++  A  +  +ML  G +P+  T
Sbjct: 436 DGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPT 495

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  ++    K    +   ++  +M+  G     +TYN L++  CK G++++A  +L++M+
Sbjct: 496 YTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAML 555

Query: 385 RKGCNPNASTFNMIFRCISKLG 406
             G  PN  T+N++    SK G
Sbjct: 556 NVGVAPNDITYNILLDGHSKHG 577



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 2/233 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +I+   K  + DLA     +M ++ V   + T++ L+    + G   EA    N M 
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT 415

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  PDKI F+ +I   C+      A      + ++  E D + +T L+ G CR G + 
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A R+  +M  AG +P+  TY++VID  C+ G +     +  EM   G  P  +T+N LM
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALM 535

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
               K  + +    + + M  +G   + ITYN L+D H K G   D + + NS
Sbjct: 536 NGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNS 587


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 171/323 (52%), Gaps = 2/323 (0%)

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAG 266
           R+ E   AP+   F+IVI  LC++   +EA+S F  +K+    PDV+ + +L+ G+ + G
Sbjct: 178 RLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            + E E++  EM+ +G + +V TY+ +I+  C+ G++  A+  FA M   G   N +TF+
Sbjct: 238 ELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFS 297

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
             +    K     + ++++ QM+  G   +  TY  LID  CK G+L+DAI +L+ MVR+
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N  T+ ++   + K   V  A  +   M+      N + Y  L+     +K+++  
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKA 417

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L L  EM+   +E +++ Y  LI   C +   + A   + +M +E  L+P   +Y  ++ 
Sbjct: 418 LGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMD 476

Query: 507 QLRRAGQLQKHEELVEKMVDRGF 529
              ++G++ +   +++K++D GF
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGF 499



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 26/386 (6%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  ++ +I+  GK  + D     ++ M+    +  V T++ L+  + + G    A   
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M+  G   + + FS  +   C++    EA   F  ++ +    +   YT L+ G C+
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           AG + +A  +  EM   G+  NV TY++++D LC+  ++  A DV   M + G   N + 
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+  H     +EK L + ++MK  G E D   Y  LI   C   KL++A  +L  M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  PN   +  +     K G V  A  M  K+ D   +PN    N  +Q+F       
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKG 520

Query: 445 MVL----------------------KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           M L                       LK +M ++ ++ ++  Y   I+ +C +     A 
Sbjct: 521 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 580

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQL 508
           +   EMI    + P  +VY  ++ Q+
Sbjct: 581 EVFSEMIGHG-IAPDRAVYNCLITQI 605



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
           AS  + +   ++  G ++ A R   ++++L+  PNT T N ++   A  +S  +V +L +
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           ++      PNV T+ I+I   C  G    A      M E  CL P    +  ++    + 
Sbjct: 182 QLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCL-PDVVTFNSLIDGYGKC 236

Query: 512 GQLQKHEELVEKMVDRGFTA 531
           G+L + E+LVE+M   G  A
Sbjct: 237 GELDEVEQLVEEMRRSGCKA 256


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 168/356 (47%), Gaps = 2/356 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M  R + +    ++ L+    + G    A+     + E   +PD + +++ I+ LCR  +
Sbjct: 530 MGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGK 589

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
            SEA+SF   +++   EPD   Y  ++   CR GN S+A ++  EMK + I+PN+ TY+ 
Sbjct: 590 FSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTT 649

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++  L   G + +A  +  EM   G  P  +T+  +++    +     +L+V+  M   G
Sbjct: 650 LVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAG 709

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
             AD   YN L+   C  G    A  VL+ M+ +G  P+  TFN +     K   ++ A 
Sbjct: 710 LHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAF 769

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
             Y +M      PN  T+N L+    ++        +  EM++  +EPN  TY IL+T Y
Sbjct: 770 ATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGY 829

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               +   A +   EM+  K   P +S Y  ++    +AG + + +EL  +M  RG
Sbjct: 830 AKKSNKVEALRLYCEMV-SKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRG 884



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 37/411 (9%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K+++ + A+   + M    V   V T S LV    R G  +EA   F  M++ G AP+ +
Sbjct: 271 KMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHV 330

Query: 220 AFSIVISILCRKRRASEAQSFFD------------------------------------S 243
            +   I  L + +R +E+                                         +
Sbjct: 331 TYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHA 390

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L D   P+ + YT LV   CRAGNI  AE++  +M+   + PNV T+S +++ L + G I
Sbjct: 391 LSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCI 450

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A     +M + G  PN +T+  L+    K    E  L VY  M   G EA+    + L
Sbjct: 451 AKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSL 510

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ++   K+G +E+A  +   M  +G   +   +  +   + K G++  A ++  ++ +   
Sbjct: 511 VNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNL 570

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            P+ V YN+ +                KEM    +EP+  TY  +I+  C  G+ + A K
Sbjct: 571 SPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALK 630

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
            + EM +   +KP    Y  ++  L  AG ++K + L+ +M   GFT  PL
Sbjct: 631 LLNEM-KWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPL 680



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 185/415 (44%), Gaps = 37/415 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ +I+   KV+    A   ++ M ++ + + V  ++ LV  +  +G A  A     RM+
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P  +  + +I   C+ +R  EA + ++ + +    PDV+  + LV G CR G  S
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA  +FREM   G+ PN  TY   ID+L +  ++  +  +  EM+  G   + + +  +M
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  + E+   V           + +TY  L+D HC+ G ++ A ++L  M  K  +
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN  TF+ I   + K G +  A     KMKD    PN VTY  L+  F   +  +  L +
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491

Query: 450 KKEMEENEVEPN-------VNTYR-------------------ILI------TMYCGM-- 475
            ++M    VE N       VN  R                   +L+      T+  G+  
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551

Query: 476 -GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G+   A K  +E++E   L P + VY + +  L R G+  + +  +++M + G 
Sbjct: 552 TGNMPAALKVGQELMERN-LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 2/357 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y   I+   KV++ + +   +  M SR V + +  ++ ++ R  + G   EA        
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
                P+ + +++++   CR      A+     +++K   P+V+ +++++ G  + G I+
Sbjct: 392 SDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIA 451

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A    R+MK +GI PNV TY  +ID   +C     A DV+ +ML  G E N+   ++L+
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLV 511

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K    E+   ++  M   G   D + Y  L+D   K G +  A+KV   ++ +  +
Sbjct: 512 NGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLS 571

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+A  +N+   C+ +LG  + A     +M++   EP+  TYN ++       +T   LKL
Sbjct: 572 PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKL 631

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
             EM+ + ++PN+ TY  L+      G    A KY+   +      P    Y  VLQ
Sbjct: 632 LNEMKWSSIKPNLITYTTLVVGLLEAGVVEKA-KYLLNEMASAGFTPTPLTYRRVLQ 687



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 183/416 (43%), Gaps = 39/416 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   +    D A   +  M+ ++V   V TFS ++   V+ G  A+A     +M+
Sbjct: 402 YTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMK 461

Query: 211 EYGCAPDKIAFSIVISIL--CRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           + G AP+ + +  +I     C+ + A+    + D L +  E +  +  +LV G  + GNI
Sbjct: 462 DSGIAPNVVTYGTLIDGFFKCQGQEAA-LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNI 520

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EAE +F++M   G+  +   Y+ ++D L + G +  A  V  E++E    P+++ +N  
Sbjct: 521 EEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVF 580

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    +  +  +      +M+  G E D  TYN +I   C++G    A+K+LN M     
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            PN  T+  +   + + G V  A  +  +M      P  +TY  ++Q  + S+S  ++L+
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700

Query: 449 LKK-----------------------------------EMEENEVEPNVNTYRILITMYC 473
           + +                                   EM    + P+  T+  LI  +C
Sbjct: 701 VHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHC 760

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              H +NA+    +M+ +  L P  + +  +L  L  AG++ + + ++ +M   G 
Sbjct: 761 KSSHLDNAFATYAQMLHQG-LSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGL 815



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 148/318 (46%), Gaps = 7/318 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MI+   +      A   ++ MK  +++  + T++ LV   + AG+  +A +  N M 
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671

Query: 211 EYGCAPDKIAFSIVISILCRKRRAS----EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
             G  P  + +  V+   C   R+     E       +      D+ VY  LV   C  G
Sbjct: 672 SAGFTPTPLTYRRVLQA-CSGSRSPYVILEVHELM--MGAGLHADITVYNTLVHVLCCHG 728

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              +A  V  EM   GI P+  T++ +I   C+   +  A   +A+ML  G  PN  TFN
Sbjct: 729 MTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFN 788

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+     A R  +   V  +MK++G E + +TY+ L+  + K     +A+++   MV K
Sbjct: 789 TLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK 848

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  P AST+N +    +K G +N A  ++ +MK       + TY+IL+  ++  ++   V
Sbjct: 849 GFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEV 908

Query: 447 LKLKKEMEENEVEPNVNT 464
             L K+M+E   +P+  T
Sbjct: 909 RILLKDMKELGFKPSKGT 926



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 150/356 (42%), Gaps = 6/356 (1%)

Query: 180 EITVDT--FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           ++  DT  ++I +      G    A    + M + G   D +  S  +  L R     EA
Sbjct: 112 QVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEA 171

Query: 238 QSFFDSLKDKFEPD---VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
            +  + L      D   V+ +  L+ G+C+  +++ A  V   M   G+  +V  Y+ ++
Sbjct: 172 AALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLV 231

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
                 G    A +V   M   G EP+ +T   L+  + K  R E+   +Y  M R G  
Sbjct: 232 AGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVL 291

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D +T + L+D  C+DG+  +A  +   M + G  PN  T+      ++K+  VN +  +
Sbjct: 292 PDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGL 351

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
            G+M       + V Y  +M         +    + +    + + PN  TY +L+  +C 
Sbjct: 352 LGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCR 411

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            G+ + A + + +M EEK + P    +  +L  L + G + K    + KM D G  
Sbjct: 412 AGNIDGAEQMLLQM-EEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIA 466



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 160/349 (45%), Gaps = 13/349 (3%)

Query: 110 STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWH 169
           +T   +I   C   +    L++L+   W + +P  +    L   ++  AG V +   A +
Sbjct: 610 ATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLE-AGVVEK---AKY 665

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY----GCAPDKIAFSIVI 225
            ++ M S     T  T+    RR ++A   + + +    + E     G   D   ++ ++
Sbjct: 666 LLNEMASAGFTPTPLTY----RRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLV 721

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            +LC      +A    D +  +   PD I +  L+ G C++ ++  A   + +M   G+ 
Sbjct: 722 HVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLS 781

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PN+ T++ ++  L   G+I  A  V  EM ++G EPN++T++ L+  + K S   + L++
Sbjct: 782 PNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRL 841

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           Y +M   G      TYN LI    K G +  A ++ + M R+G    +ST++++    SK
Sbjct: 842 YCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK 901

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           L +      +   MK+L  +P+  T + + + F+    T    +L K +
Sbjct: 902 LRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 5/285 (1%)

Query: 102 STAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
           S   + +P T R V++   G R    +L+V           +      L H ++   G  
Sbjct: 672 SAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVH-VLCCHGMT 730

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R+   A   +D M  R +     TF+ L+  + ++     A   + +M   G +P+   F
Sbjct: 731 RK---ATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATF 787

Query: 222 SIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + ++  L    R  EA +    +K    EP+ + Y  LV G+ +  N  EA R++ EM  
Sbjct: 788 NTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVS 847

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G  P   TY+ +I    + G + +A ++F+EM   G    S T++ L+    K     +
Sbjct: 848 KGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTE 907

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           V  +   MK LG +    T + +     K G   +A ++L ++ +
Sbjct: 908 VRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AG++ + D     I  MK   +E    T+ ILV  Y +     EA+  +  M   G  P 
Sbjct: 797 AGRIGEAD---TVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 853

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI----VYTNLVRGWCRAGNISEAER 273
              ++ +IS   +    ++A+  F  +K +    V+     Y  L+ GW +  N +E   
Sbjct: 854 ASTYNSLISDFAKAGMMNQAKELFSEMKRR---GVLHTSSTYDILLNGWSKLRNGTEVRI 910

Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
           + ++MK  G +P+  T S +  A  + G    A  +   + +V
Sbjct: 911 LLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 8/368 (2%)

Query: 164 FDLAWHFIDLMKSRNVEI-TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           FD+ W       +RNV +     F  L    +  G+  EA+  F++M+ +   P   + +
Sbjct: 11  FDVLW------STRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCN 64

Query: 223 IVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            ++    +  +    + FF D +    +P V  Y  ++   C+ G++  A  +F EMK  
Sbjct: 65  GLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 124

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G+ P+  TY+ +ID   + G++      F EM ++ CEP+ IT+N L+    K  +  K 
Sbjct: 125 GLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKG 184

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           L+ + +MKR G + + ++Y+ L+D  CK+G ++ AIK    M R G  PN  T+  +   
Sbjct: 185 LEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 244

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             K+G+++ A R+  +M  +  E N VTY  L+      ++    L L  EM E +++  
Sbjct: 245 YCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVT 304

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V T+ +LI   C     + A  Y   +  +  L+  +++Y  ++  L +  Q++    L 
Sbjct: 305 VVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLF 364

Query: 522 EKMVDRGF 529
           E+M  +G 
Sbjct: 365 EQMAQKGL 372



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 169/371 (45%), Gaps = 3/371 (0%)

Query: 160 KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI 219
           K+ + D    F   M     + TV T++I++    + G    A   F  M+  G  PD +
Sbjct: 72  KLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTV 131

Query: 220 AFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
            ++ +I    +  R  +   FF+ +KD   EPDVI Y  L+  +C+ G + +    FREM
Sbjct: 132 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREM 191

Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           K  G++PNV +YS ++DA C+ G + +A   + +M  VG  PN  T+ +L+  + K    
Sbjct: 192 KRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNL 251

Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
               ++ N+M ++G E + +TY  LID  C      + + +L+ MV         TF ++
Sbjct: 252 SDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVL 311

Query: 399 FRCISKLGDVNGAHRMYGKMK-DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
              + K   V+ A   +G++  D   + N   Y  ++         +    L ++M +  
Sbjct: 312 IDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKG 371

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + P+   Y  L+      G+   A   +R+ + E  +K     Y  ++  L    QLQK 
Sbjct: 372 LVPDRTAYTSLMDGNFKQGNVLEALA-LRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKA 430

Query: 518 EELVEKMVDRG 528
              +E+M+  G
Sbjct: 431 RSFLEEMIGEG 441



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MI+   K    + A    + MK R +     T++ ++  + + G   + V  F  M+
Sbjct: 98  YNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 157

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           +  C PD I ++ +I+  C+  +  +   FF  +K +  +P+V+ Y+ LV  +C+ G + 
Sbjct: 158 DMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQ 217

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A + + +M+  G+ PN YTY+ +IDA C+ G ++ A  +  EML+VG E N +T+  L+
Sbjct: 218 QAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALI 277

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-GC 388
                     + L + ++M  L  +   +T+  LID  CK+  +  AI     +    G 
Sbjct: 278 DGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGL 337

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             NA+ +  +   + K   V  A  ++ +M      P+   Y  LM       +    L 
Sbjct: 338 QANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALA 397

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNN---AYKYIREMIEE 491
           L+ +M E  ++ ++  Y  L+    G+ H N    A  ++ EMI E
Sbjct: 398 LRDKMVETGMKLDLLAYTSLVW---GLSHCNQLQKARSFLEEMIGE 440



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 43/305 (14%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +IN   K  +      F   MK   ++  V ++S LV  + + G+  +A+  
Sbjct: 163 PDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 222

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCR 264
           +  M   G  P++  ++ +I   C+    S+A    +  L+   E +V+ YT L+ G C 
Sbjct: 223 YVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCG 282

Query: 265 AGNISEAERVFREM----------------------KMA--------------GIQPNVY 288
             N +E   +  EM                      K+               G+Q N  
Sbjct: 283 WENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAA 342

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ +ID LC+  Q+  A  +F +M + G  P+   + +LM  + K     + L + ++M
Sbjct: 343 IYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 402

Query: 349 KRLGCEADTITYNFLI--DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
              G + D + Y  L+    HC   +L+ A   L  M+ +G +P+      + +   +LG
Sbjct: 403 VETGMKLDLLAYTSLVWGLSHCN--QLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 460

Query: 407 DVNGA 411
            +N A
Sbjct: 461 CINEA 465



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/237 (19%), Positives = 107/237 (45%), Gaps = 2/237 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K+     A+   + M    VE  V T++ L+          E +H  + M 
Sbjct: 238 YTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMV 297

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNI 268
           E       + F ++I  LC+ +  S+A  +F  + + F  + +  +YT ++ G C+   +
Sbjct: 298 ELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQV 357

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
             A  +F +M   G+ P+   Y+ ++D   + G +  A  +  +M+E G + + + + +L
Sbjct: 358 EAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSL 417

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           +      ++ +K      +M   G   D +    ++  H + G + +A+++ + +++
Sbjct: 418 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMK 474


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 158/320 (49%), Gaps = 4/320 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           TF+IL+R   R G    A   F  ME +GC PD + ++ +I+ LC+          F  +
Sbjct: 180 TFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEI 239

Query: 245 KDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           + + +  PD++ YT+++ G+C++G + EA  +F EM  +GIQPNV T++++ID   + G 
Sbjct: 240 QSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGN 299

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           I  A  ++ +M    C  + +TF +L+  + +A +    L+ +N MK         TY  
Sbjct: 300 IAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAV 359

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI+  CK+ +L +A   L  +      P    +N +     K G+V+  + +  +M++ +
Sbjct: 360 LINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKR 419

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
           C+P+ VT+ IL+            + +   M      P+  T   LI+     G  N AY
Sbjct: 420 CDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAY 479

Query: 483 KYIREMIEEKCLKPGSSVYE 502
           +  +  +E++ L  G S +E
Sbjct: 480 RIRKMALEDRNL--GLSSFE 497



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 171/371 (46%), Gaps = 5/371 (1%)

Query: 146 HSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H PD  L   ++    +   FD+    +  ++ + V I    ++ L+   V+     EA+
Sbjct: 104 HLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAI 163

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
           + F         PD   F+I+I  LCR      A   F  ++     PDV+ Y  L+ G 
Sbjct: 164 YLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGL 223

Query: 263 CRAGNISEAERVFREMK-MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
           C+A  +     +F+E++  +   P++ TY+ +I   C+ G++  A ++F EM+  G +PN
Sbjct: 224 CKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPN 283

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            ITFN L+    K     +   +Y +M    C AD +T+  LID +C+ G++   +K  N
Sbjct: 284 VITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWN 343

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M  +  +P   T+ ++   + K   +N A    G++K+    P    YN ++  F  + 
Sbjct: 344 VMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAG 403

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
           + D    + KEMEE   +P+  T+ ILI  +C  G    A      M+  +C  P +   
Sbjct: 404 NVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRC-APDNITV 462

Query: 502 EMVLQQLRRAG 512
             ++  L +AG
Sbjct: 463 NSLISCLLKAG 473



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 169/352 (48%), Gaps = 3/352 (0%)

Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
           NV     T+++L+R   + G        F+ M   G  PD      +++ + +       
Sbjct: 68  NVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMV 127

Query: 238 QSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
           +     ++ K    +  VY NL+    +   + EA  +F+E  +    P+ +T++I+I  
Sbjct: 128 KKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRG 187

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK-RLGCEA 355
           LCR G + RA +VF +M   GC P+ +T+N L+    KA+  ++  +++ +++ R  C  
Sbjct: 188 LCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSP 247

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D +TY  +I   CK GK+++A  +   M+R G  PN  TFN++     K+G++  A  MY
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMY 307

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            KM    C  + VT+  L+  +  +   +  LK    M+   V P V TY +LI   C  
Sbjct: 308 RKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKE 367

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
              N A  ++ + I+   + P   +Y  V+    +AG + +   ++++M ++
Sbjct: 368 NRLNEARDFLGQ-IKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEK 418



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 115/236 (48%), Gaps = 3/236 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I+   K  +   A +  + M    ++  V TF++L+  + + G  AEA  
Sbjct: 246 SPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEA 305

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            + +M  + C+ D + F+ +I   CR  + +    F++ +K +   P V  Y  L+   C
Sbjct: 306 MYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALC 365

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +   ++EA     ++K + I P  + Y+ VID  C+ G +   + +  EM E  C+P+ +
Sbjct: 366 KENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKV 425

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           TF  L+  H    R  + + ++N+M    C  D IT N LI C  K G   +A ++
Sbjct: 426 TFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 87/205 (42%)

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N LMR   +    + V  V++ M   G   D+    FL+    +    +   K+L  +
Sbjct: 75  TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             K    N+  +N +   + K   V+ A  ++ +   ++  P+T T+NIL++        
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D   ++ K+ME     P+V TY  LI   C         +  +E+       P    Y  
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRG 528
           ++    ++G++++   L E+M+  G
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSG 279



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +  P +Y+ +I+   K    D     +  M+ +  +    TF+IL+  +   G   EA++
Sbjct: 386 IPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAIN 445

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
            FNRM    CAPD I  + +IS L +    +EA
Sbjct: 446 IFNRMLATRCAPDNITVNSLISCLLKAGMPNEA 478


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 186/391 (47%), Gaps = 22/391 (5%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           Q   A+ F D + +    +   ++  L+    + G    A+    R++      + + ++
Sbjct: 140 QIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYN 199

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            VI  +C+ +  ++A   +  +  K   P+V+ Y+ L+ G+   G + +A  +F ++ + 
Sbjct: 200 TVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILE 259

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
            I+P+ YT++I++D  C+  ++     VFA M++ G  P+ +T+N+LM  +         
Sbjct: 260 NIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTA 319

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
             ++N M + G   D  +YN LI+  CK  K++ A+ + N M  K   PN  T+N +   
Sbjct: 320 KSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDG 379

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           +SK G ++ A ++  +M D    PN +TYN ++     +   D  + L  + ++  ++P+
Sbjct: 380 LSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPS 439

Query: 462 --------------------VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                               VNTY ++I  +C  G ++ A   + +M +  C+ P +  Y
Sbjct: 440 MYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCI-PNAVTY 498

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
           E+ ++ L    +  K E+L  +M+ RG   R
Sbjct: 499 EITIRSLLDNNENDKAEKLFREMITRGLLNR 529



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 166/351 (47%), Gaps = 16/351 (4%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I    K +  + A+     M S+ +   V T+S L+  +   G   +A+  FN++
Sbjct: 197 MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI 256

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNI 268
                 PD   F+I++   C+ R+  E ++ F   +K    PDV+ Y +L+ G+C    +
Sbjct: 257 ILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEV 316

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           + A+ +F  M   G+ P++ +Y+I+I+  C+  ++ +A ++F EM      PN +T+N+L
Sbjct: 317 NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSL 376

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K+ R    LQ+ +QM   G   + +TYN +ID   K  +++ AI ++     +G 
Sbjct: 377 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 436

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  T+ ++   I  L  V G             +    TYN+++  F      D  L 
Sbjct: 437 QPSMYTYTIL---IDGLCKVEGY------------DITVNTYNVMIHGFCKKGLFDEALS 481

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
           L  +M+++   PN  TY I I         + A K  REMI    L   +S
Sbjct: 482 LLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSAS 532



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 148/350 (42%), Gaps = 41/350 (11%)

Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           I++S   +         +A S F+ L +    P    +  ++    ++ +      + ++
Sbjct: 52  ISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQK 111

Query: 278 MKMAGIQPNVYTYSIVIDALCRCG----QITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
           M+  GI+PN++  +I+I   C+ G    QI +A     +++ +G   + +++  L+    
Sbjct: 112 MEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLC 171

Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
           K   T   L +  ++     + + + YN +I   CKD  + DA  + + MV KG +PN  
Sbjct: 172 KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231

Query: 394 TFNMIFRCISKLGDVNGAHRMYGKM--------------------KDLKCE--------- 424
           T++ +      +G +  A  ++ K+                    KD K +         
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291

Query: 425 ------PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
                 P+ VTYN LM  +   K  +    +   M +  V P++ +Y ILI  +C +   
Sbjct: 292 MKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV 351

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + A     EM   K + P    Y  ++  L ++G++    +LV++M DRG
Sbjct: 352 DKAMNLFNEM-HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 400



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 24/210 (11%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+  Y+ +IN   K+++ D A +  + M  +N+   V T++ L+    ++G  + A+ 
Sbjct: 332 NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQ 391

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV---- 259
             ++M + G  P+ + ++ +I  L +  +  +A +     KD+  +P +  YT L+    
Sbjct: 392 LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC 451

Query: 260 ----------------RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
                            G+C+ G   EA  +  +MK +   PN  TY I I +L    + 
Sbjct: 452 KVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNEN 511

Query: 304 TRAHDVFAEMLEVGCEPNSITFN-NLMRVH 332
            +A  +F EM+  G    S ++  + M++H
Sbjct: 512 DKAEKLFREMITRGLLNRSASYPCSSMKIH 541



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 5/247 (2%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           N  +YS           +  A  +F  +L     P +  FN ++   VK+     VL + 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDG----KLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            +M+  G + +    N LI C C+ G    ++  A    + +V  G + +  ++  +   
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + K+G+   A  +  ++     + N V YN ++      K  +    L  EM    + PN
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V TY  LI+ +  +G   +A     ++I E  +KP    + +++    +  ++++ + + 
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILEN-IKPDGYTFNILVDGFCKDRKMKEGKTVF 288

Query: 522 EKMVDRG 528
             M+ +G
Sbjct: 289 AMMMKQG 295


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 169/344 (49%), Gaps = 2/344 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
            SIL+  + + G    +     ++ + G  P+ I  + +I  LC K +  +A  F D + 
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 246 D-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
              F  + + Y  L+ G C+ G  S A ++ R +    +QPNV  Y+ +ID++C+   + 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
            A D+++EM+  G  P+ +T+N L+       + +    ++N+M       +  T+N L+
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D  CK+ +L++A  VL  M+++G  P+  T+N +      + +VN A  ++  +      
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
           PN  +Y+I++  F   K  D  + L KEM  N + P+V TY  LI   C +G  + A K 
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKL 409

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + EM  ++ +      Y  +L  L +  Q+ K   L+ KM D G
Sbjct: 410 VDEM-HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 186/379 (49%), Gaps = 11/379 (2%)

Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
           +I   C V      LQ+L   +    +P  V    +Y+ +I+   KV+  + A+     M
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVV----MYNTIIDSMCKVKLVNEAFDLYSEM 238

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
            S+ +   V T++ L+  +   G   +A   FN+M      P+   F+I++   C++RR 
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298

Query: 235 SEAQSFFD-SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            EA++     +K   +PDV  Y +L+  +C    +++A+ +F  +   G+ PN+++YSI+
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           I   C+  ++  A ++F EM      P+ +T+N+L+    K  +    L++ ++M   G 
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D ITYN ++D  CK+ +++ AI +L  M  +G  P+  T+  +   + K G +  A  
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478

Query: 414 MYGKMKDLKCEPNTVTYNI---LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
           ++   +DL  +   +  NI   ++Q F +    D  L L  +MEEN   PN  TY I+I 
Sbjct: 479 VF---EDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIIC 535

Query: 471 MYCGMGHWNNAYKYIREMI 489
                   + A K +REMI
Sbjct: 536 SLFDKDENDKAEKLLREMI 554



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/409 (22%), Positives = 188/409 (45%), Gaps = 40/409 (9%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G++ Q   A  F D + +    +   ++  L+    + G  + A+    R++     P
Sbjct: 154 LKGQIHQ---ALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 210

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + ++ +I  +C+ +  +EA   +  +  K   PDV+ Y  L+ G+C  G + +A  +F
Sbjct: 211 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            +M    I PNVYT++I++D  C+  ++  A +V A M++ G +P+  T+N+LM  +   
Sbjct: 271 NKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLV 330

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               K   ++N + + G   +  +Y+ +I   CK  K+++A+ +   M      P+  T+
Sbjct: 331 KEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTY 390

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           N +   + KLG ++ A ++  +M D     + +TYN ++     +   D  + L  +M++
Sbjct: 391 NSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 450

Query: 456 NEVEP-----------------------------------NVNTYRILITMYCGMGHWNN 480
             ++P                                   +VN Y  +I  +C  G ++ 
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE 510

Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           +   + +M E  C+ P +  YE+++  L    +  K E+L+ +M+ RG 
Sbjct: 511 SLDLLSKMEENGCI-PNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 132/280 (47%), Gaps = 1/280 (0%)

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           +P +  +  ++    ++ + S    + R+M+  GI  ++   SI+I+   + GQ   +  
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           V A++L++G EPN IT   L++      +  + LQ ++++  LG   + ++Y  LI+  C
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K G+   A+++L  +  K   PN   +N I   + K+  VN A  +Y +M      P+ V
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           TYN L+  F           L  +M    + PNV T+ IL+  +C       A K +  M
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEA-KNVLAM 307

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + ++ +KP    Y  ++ +     ++ K + +   +  RG
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +++    V++ + A H  + +  R V   + ++SI++  + +     EA++ 
Sbjct: 315 PDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNL 374

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCR 264
           F  M      PD + ++ +I  LC+  + S A    D + D+  P D I Y +++   C+
Sbjct: 375 FKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCK 434

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              + +A  +  +MK  GIQP++ TY+ ++D LC+ G++  A  VF ++L  G   +   
Sbjct: 435 NHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNI 494

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED-AIKVLNSM 383
           +  +++        ++ L + ++M+  GC  + +TY  +I C   D    D A K+L  M
Sbjct: 495 YTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII-CSLFDKDENDKAEKLLREM 553

Query: 384 VRKG 387
           + +G
Sbjct: 554 ITRG 557


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 172/346 (49%), Gaps = 1/346 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           + +L+R   + G+  +A     +M   G  P     S+V+  L   RR  +A   F+ + 
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           D   PDV  Y NL+   C+A  + EA  +F  MK AG++P++ TY+ ++   C+ G +  
Sbjct: 395 DSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDE 454

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  +++EM   G +PN +T+  LMR ++     +    + ++MK+ G   +  TYN LI+
Sbjct: 455 AVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLIN 514

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C   ++ +   +L S + +G  P   T+N I     K G +  A  +Y +M++    P
Sbjct: 515 GICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPP 574

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N +TY   +  +  +  +DM LK+  ++    ++P++  Y  LI  +C  G+ ++A + +
Sbjct: 575 NIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL 634

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             ++++  L P + VY  ++   +    +++  +  E M+  G  A
Sbjct: 635 VILLKDG-LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVA 679



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 156/310 (50%), Gaps = 1/310 (0%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           + FD A+  +D MK   V     T+++L+          E           G  P  + +
Sbjct: 485 KDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTY 544

Query: 222 SIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + +I+   +      A + +  +++K   P++I YT+ + G+CR G    A ++  +++ 
Sbjct: 545 NSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRR 604

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G+QP++  Y+ +I+  C+ G ++ A  +   +L+ G  PN++ +N+L+  +   +  ++
Sbjct: 605 RGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKE 664

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           V + Y  M + G  ADT TY  LID   KDG +  A+++ + M+ KG  P+A TF  +  
Sbjct: 665 VSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTH 724

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + GD++GA ++  +M+ L   PN   YN+L+  +          +L  EM    ++P
Sbjct: 725 GLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQP 784

Query: 461 NVNTYRILIT 470
           +  TY IL++
Sbjct: 785 DDTTYDILVS 794



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 169/392 (43%), Gaps = 38/392 (9%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC---- 229
           M+ R   +    F  L+   ++ G+  +AV  F+ M      PD+  +++ I+ LC    
Sbjct: 183 MRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGD 242

Query: 230 -------------------------------RKRRASEAQSFFDSLKDKFEP-DVIVYTN 257
                                          +  R  EA    D ++D  +  DVIV T 
Sbjct: 243 GGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATT 302

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           L+RG+C    +  A  +F+E    GI P    Y ++I    + G   +A+++  +M   G
Sbjct: 303 LMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQG 362

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P++   + +++  +   R +  + ++ +M   G   D  TYN LI  HC+  KL +A+
Sbjct: 363 LLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREAL 421

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            + + M + G  P+ +T+N +     K G ++ A ++Y +M     +PN VTY  LM+ +
Sbjct: 422 NLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGY 481

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
              K  D    L  EM++N V  N  TY +LI   C +         ++  + E  + P 
Sbjct: 482 IAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFI-PT 540

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
              Y  ++    +AG +     + ++M ++G 
Sbjct: 541 MMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F+ +   Y+ +IN   K      A+     M+ + +   + T++  +  Y R G +  A+
Sbjct: 537 FIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMAL 596

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGW 262
              N +   G  PD +A++ +I+  C++   S A Q     LKD   P+ +VY +L+ G+
Sbjct: 597 KMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
                + E  + +  M   GI  +  TY+ +ID   + G +  A ++++EM+  G  P++
Sbjct: 657 KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
            TF  L     ++   +   ++  +M+RL    +   YN LI+ + +D KL++A ++ + 
Sbjct: 717 FTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDE 776

Query: 383 MVRKGCNPNASTFNMI 398
           M+  G  P+ +T++++
Sbjct: 777 MLNMGIQPDDTTYDIL 792



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 153/368 (41%), Gaps = 36/368 (9%)

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYT 256
           L + A   +  M   G  PD  + + ++    R   A +A + F  ++ + +  D  ++ 
Sbjct: 137 LPSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFD 196

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L+    + G   +A R+F EM  A I P+   Y++ I ALC+ G   RA  +  EM EV
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G +    T+  ++ V VK  R E+ L+V ++M+  G + D I    L+  +C   ++ +A
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM------------------ 418
           + +    ++ G  P    + ++ R   ++G    A+ +  +M                  
Sbjct: 317 LNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKG 376

Query: 419 -------KDLKC---------EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
                  KD  C          P+  TYN L+     +      L L   M++  V+P++
Sbjct: 377 LLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSI 436

Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
           NTY  L+  YC  G  + A K   EM  E   KP    Y  +++             L++
Sbjct: 437 NTYNSLLMGYCKKGCMDEAVKLYSEMPMEG-FKPNVVTYITLMRGYIAKKDFDNAYALLD 495

Query: 523 KMVDRGFT 530
           +M   G +
Sbjct: 496 EMKQNGVS 503


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++N   K R  ++ W     M    V   +  F++L+    ++G   +A    N ME   
Sbjct: 168 LLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRF 227

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             PD   ++ +IS+ C+K    EA    D + +    PD++ Y +L+ G+CR G + EA 
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREAL 287

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITFNNLMRV 331
           R+FRE+   G  PN  TY+ +ID  CR   +  A  +  E++EV G  P  +T+N+++R 
Sbjct: 288 RLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRL-REVMEVEGLHPGVVTYNSILRK 344

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             +  + +   ++ N+M     E D +T N LI+ +CK G +  A+KV   M+  G  P+
Sbjct: 345 LCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPD 404

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             TF  +     KL +V+ A     +M D    P+  TY+ L+  +    + + V++L  
Sbjct: 405 QFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPD 464

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           E+    +  +++ YR LI   C +    +A + I  +++ K +K  S VY  +     +A
Sbjct: 465 ELSRKGLFVDISVYRALIRRLCKIDKIESAER-IFTLMQGKGMKGDSVVYTSLAYAYFKA 523

Query: 512 GQLQKHEELVEKMVDR 527
           G+     +++++M  R
Sbjct: 524 GKAIAASDMLDEMDKR 539



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 186/415 (44%), Gaps = 54/415 (13%)

Query: 133 SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN-----------VEI 181
           +FF WV +     HS      MI+   K +QF  A + ++ +  R+           V I
Sbjct: 60  AFFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRI 119

Query: 182 TVD------TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
             D        S LV  Y  + +  +A+  F  M  +G  P   A +++++ L + R   
Sbjct: 120 HDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR--- 176

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
                               TN+V  W          +V+++M   G+ PN++ ++++I 
Sbjct: 177 -------------------LTNMV--W----------KVYKKMVRVGVVPNIHIFNVLIH 205

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           A C+ G + +A  +  EM      P+  T+N L+ ++ K     + L + ++M+R G   
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D +TYN LI   C++G++ +A+++   +   G  PN  T+  +     ++ D+  A R+ 
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLR 323

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             M+     P  VTYN +++            +L  EM E +VEP+  T   LI  YC +
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           G   +A K  ++M+E   LKP    ++ ++    +  ++   +E + +M+D GF+
Sbjct: 384 GDMGSAMKVKKKMLEAG-LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 170/396 (42%), Gaps = 43/396 (10%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            R   V +  +++ +I+   K    + A   ++ M+SR +   + T++ L+  Y + G+ 
Sbjct: 189 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMH 248

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLV 259
            EA+   +RME  G +PD + ++ +I   CR+ R  EA   F  +     P+ + YT L+
Sbjct: 249 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA-TPNHVTYTTLI 307

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYS---------------------------- 291
            G+CR  ++ EA R+   M++ G+ P V TY+                            
Sbjct: 308 DGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVE 367

Query: 292 -------IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                   +I+A C+ G +  A  V  +MLE G +P+  TF  L+    K    +   + 
Sbjct: 368 PDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEF 427

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +M   G      TY++L+D +      E  I++ + + RKG   + S +  + R + K
Sbjct: 428 LFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCK 487

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           +  +  A R++  M+    + ++V Y  L   +  +        +  EM++  +   +  
Sbjct: 488 IDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKI 547

Query: 465 YRILITMYCGMGH-----WNNAYKYIREMIEEKCLK 495
           YR     Y G G      W++  +  R +I +  LK
Sbjct: 548 YRCFSASYAGDGSILGLFWDHVIE--RRLISKNILK 581


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 179/354 (50%), Gaps = 10/354 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           ++  L+    + G A  A+    R++     P+ + ++ +I  +C+ +  +EA   +  +
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +   PDV+ Y+ L+ G+   G + +A  +F +M +  I+P+VYT++I++D  C+ G++
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
                VFA M++ G +PN +T+ +LM  +    +  K   ++N M + G   DT +YN +
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK  K+++A+ +   M  K   PN  T+  +   + K G ++ A ++  +M D   
Sbjct: 325 INGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP--------NVNTYRILITMYCGM 475
            P+ +TY+ ++     +   D  + L  ++++   E         +V  Y ++I  +C  
Sbjct: 385 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVK 444

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G +N A   + +M E+    P +  YE+++  L +  +    E+L+ +M+ RG 
Sbjct: 445 GLFNEALALLSKM-EDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 193/416 (46%), Gaps = 18/416 (4%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
            L +   FN+ T    F     L +  I    K  + +L   F  L+  +N    +  F 
Sbjct: 8   FLSLFLIFNFQTLNSSFQQIYTLNYITII---KNDEHNLVSSFNRLLHQKNPTPPIFEFG 64

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKD 246
            ++   V+      A+    +ME  G A + +  +I+I+   +  +   + S F + LK 
Sbjct: 65  KILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKK 124

Query: 247 KFEPDVIVYTNLVRGWC-------------RAGNISEAERVFREMKMAGIQPNVYTYSIV 293
            ++P+VI  T L++G C             + G    A ++ R +    +QPNV  Y+ +
Sbjct: 125 GYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTI 184

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID++C+   +  A D+++EM+  G  P+ +T++ L+       + +  + ++N+M     
Sbjct: 185 IDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENI 244

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
           + D  T+N L+D  CKDGK+++   V   M+++G  PN  T+  +      +  VN A+ 
Sbjct: 245 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANS 304

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  M      P+T +YNI++  F   K  D  + L K+M    + PNV TY  LI   C
Sbjct: 305 IFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLC 364

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G  + A K + EM  ++ + P    Y  +L  L +  Q+ K   L+ K+ D+ F
Sbjct: 365 KSGKISYALKLVDEM-HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVF 419



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 9/176 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ MIN   K+++ D A +    M  +N+   V T++ L+    ++G  + A+   + M 
Sbjct: 321 YNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMH 380

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---------FEPDVIVYTNLVRG 261
           + G  PD I +S ++  LC+  +  +A +    LKD+         +  DV  YT +++G
Sbjct: 381 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQG 440

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           +C  G  +EA  +  +M+  G  P+  TY I+I +L +  +   A  +  EM+  G
Sbjct: 441 FCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 209/418 (50%), Gaps = 17/418 (4%)

Query: 127 PLLQVLSFFNWVTARPEF--VHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEIT 182
           P L V + FN   +R +   V SP    Y  +++   +  + +LA  F   +    + + 
Sbjct: 53  PALAV-ALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVD 111

Query: 183 VDTFSILVRRYVRAGLAAEAVHAF-NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
               S L++ +  A    EA+    +R  E GC PD  +++I++  LC + ++ +A +  
Sbjct: 112 AIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLL 171

Query: 242 DSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
             + +      PDV+ Y  ++ G+ + G++++A  +F+EM   GI P++ TY+ V+ ALC
Sbjct: 172 RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 231

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           +   + +A     +M+     PN+ T+NNL+  +    + ++ ++V+ +M+R     D +
Sbjct: 232 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 291

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           T + L+   CK GK+++A  V ++M  KG NP+  ++N++    +  G +     ++  M
Sbjct: 292 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 351

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
                 P+  T+N+ ++ +A     D  + +  EM ++ V+P+V TYR +I   C +G  
Sbjct: 352 LGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 411

Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE-------ELVEKMVDRGF 529
           ++A +   +MI++  + P    Y  ++Q     G L K +       E++   +D GF
Sbjct: 412 DDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGILLKTQGIDFGNNEIMALHLDIGF 468


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 193/401 (48%), Gaps = 9/401 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + + +F W   R E  H P+ Y+ ++ +  + R FD     +  M       +V+T   +
Sbjct: 80  RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEM 139

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KF 248
           V   V+A    E       M ++   P   A++ +I        +    + F  +++  +
Sbjct: 140 VLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           EP V ++T L+RG+ + G +  A  +  EMK + +  ++  Y++ ID+  + G++  A  
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM---KRLGCEADTITYNFLID 365
            F E+   G +P+ +T+ +++ V  KA+R ++ ++++  +   +R+ C   T  YN +I 
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC---TYAYNTMIM 316

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            +   GK ++A  +L     KG  P+   +N I  C+ K+G V+ A R++ +MK     P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK-DAAP 375

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N  TYNIL+ M   +   D   +L+  M++  + PNV T  I++   C     + A   I
Sbjct: 376 NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA-I 434

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            E ++ K   P    +  ++  L + G++    ++ EKM+D
Sbjct: 435 FEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLD 475



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 174/374 (46%), Gaps = 3/374 (0%)

Query: 151 YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  MI +  K  + D A   F  L K+R V  T   ++ ++  Y  AG   EA     R 
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              G  P  IA++ +++ L +  +  EA   F+ +K    P++  Y  L+   CRAG + 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLD 394

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +   M+ AG+ PNV T +I++D LC+  ++  A  +F +M    C P+ ITF +L+
Sbjct: 395 CAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLI 454

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R +   ++Y +M    C  ++I Y  LI      G+ ED  K+   MV + C+
Sbjct: 455 DGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCS 514

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+    N    C+ K G+      M+ ++K  +  P+  +Y+IL+     +   +   +L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYEL 574

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M+E     +   Y I+I  +C  G  N AY+ + EM + K  +P    Y  V+  L 
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLA 633

Query: 510 RAGQLQKHEELVEK 523
           +  +L +   L E+
Sbjct: 634 KIDRLDEAYMLFEE 647



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 183/388 (47%), Gaps = 4/388 (1%)

Query: 145 VHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           V +PD   +  +I+  GKV + D A+   + M   +       ++ L++ +   G   + 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG 261
              +  M    C+PD    +  +  + +     + ++ F+ +K + F PD   Y+ L+ G
Sbjct: 502 HKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHG 561

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             +AG  +E   +F  MK  G   +   Y+IVID  C+CG++ +A+ +  EM   G EP 
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T+ +++    K  R ++   ++ + K    E + + Y+ LID   K G++++A  +L 
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            +++KG  PN  T+N +   + K  ++N A   +  MK+LKC PN VTY IL+      +
Sbjct: 682 ELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             +      +EM++  ++P+  +Y  +I+     G+   A   + +  +     P S+ Y
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA-GALFDRFKANGGVPDSACY 800

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +++ L    +      L E+   RG 
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 185/416 (44%), Gaps = 38/416 (9%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L+  +I    K  + D A   +D MKS +++  +  +++ +  + + G    A   F+ +
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK---------------------DKF 248
           E  G  PD++ ++ +I +LC+  R  EA   F+ L+                      KF
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324

Query: 249 E---------------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
           +               P VI Y  ++    + G + EA RVF EMK     PN+ TY+I+
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNIL 383

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           ID LCR G++  A ++   M + G  PN  T N ++    K+ + ++   ++ QM    C
Sbjct: 384 IDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVC 443

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
             D IT+  LID   K G+++DA K+   M+   C  N+  +  + +     G     H+
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           +Y  M +  C P+    N  M     +   +    + +E++     P+  +Y ILI    
Sbjct: 504 IYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLI 563

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G  N  Y+    M E+ C+   +  Y +V+    + G++ K  +L+E+M  +GF
Sbjct: 564 KAGFANETYELFYSMKEQGCVLD-TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 3/341 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++RR      A E    + R  E    P+     +++   CR   A + Q   +     F
Sbjct: 71  VLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD-QILGEMSVAGF 129

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P V     +V    +A  + E   V + M+    +P    Y+ +I A            
Sbjct: 130 GPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F +M E+G EP    F  L+R   K  R +  L + ++MK    +AD + YN  ID   
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K GK++ A K  + +   G  P+  T+  +   + K   ++ A  M+  ++  +  P T 
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YN ++  + ++   D    L +        P+V  Y  ++T    MG  + A +   EM
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +K   P  S Y +++  L RAG+L    EL + M   G 
Sbjct: 370 --KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGL 408



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 129/323 (39%), Gaps = 77/323 (23%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           +KSR       ++SIL+   ++AG A E    F  M+E GC  D  A++IVI   C+  +
Sbjct: 543 IKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602

Query: 234 ASEAQSFFDSLKDK-FEP-----------------------------------DVIVYTN 257
            ++A    + +K K FEP                                   +V++Y++
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYT---------------------------- 289
           L+ G+ + G I EA  +  E+   G+ PNVYT                            
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 290 -------YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
                  Y I+I+ LC+  +  +A   + EM + G +P++I++  ++    KA    +  
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF--- 399
            ++++ K  G   D+  YN +I+      +  DA  +     R+G + +  T  ++    
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842

Query: 400 ---RCISKLGDVNGAHRMYGKMK 419
               C+ +   V    R  GK +
Sbjct: 843 HKNDCLEQAAIVGAVLRETGKAR 865



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 113/237 (47%), Gaps = 2/237 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA      + 
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ ++  L +    +EA   F S+K+ K  P+ + Y  L+ G C+    +
Sbjct: 685 QKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   ++EM+  G++P+  +Y+ +I  L + G I  A  +F      G  P+S  +N ++
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
                 +R      ++ + +R G      T   L+D   K+  LE A  ++ +++R+
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA-AIVGAVLRE 860



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 36/204 (17%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+  GKV + D A+  ++ +  + +   V T++ L+   V+A    EA+  F  M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 718

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK------------------------ 245
           +E  C P+++ + I+I+ LC+ R+ ++A  F+  ++                        
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778

Query: 246 -------DKFE-----PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
                  D+F+     PD   Y  ++ G        +A  +F E +  G+  +  T  ++
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVL 838

Query: 294 IDALCRCGQITRAHDVFAEMLEVG 317
           +D L +   + +A  V A + E G
Sbjct: 839 LDTLHKNDCLEQAAIVGAVLRETG 862


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++N   K R  ++ W     M    V   +  F++L+    ++G   +A    N ME   
Sbjct: 168 LLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRF 227

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             PD   ++ +IS+ C+K    EA    D + +    PD++ Y +L+ G+CR G + EA 
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREAL 287

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITFNNLMRV 331
           R+FRE+   G  PN  TY+ +ID  CR   +  A  +  E++EV G  P  +T+N+++R 
Sbjct: 288 RLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRL-REVMEVEGLHPGVVTYNSILRK 344

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             +  + +   ++ N+M     E D +T N LI+ +CK G +  A+KV   M+  G  P+
Sbjct: 345 LCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPD 404

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             TF  +     KL +V+ A     +M D    P+  TY+ L+  +    + + V++L  
Sbjct: 405 QFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPD 464

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           E+    +  +++ YR LI   C +    +A + I  +++ K +K  S VY  +     +A
Sbjct: 465 ELSRKGLFVDISVYRALIRRLCKIDKIESAER-IFTLMQGKGMKGDSVVYTSLAYAYFKA 523

Query: 512 GQLQKHEELVEKMVDR 527
           G+     +++++M  R
Sbjct: 524 GKAIAASDMLDEMDKR 539



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 186/415 (44%), Gaps = 54/415 (13%)

Query: 133 SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN-----------VEI 181
           +FF WV +     HS      MI+   K +QF  A + ++ +  R+           V I
Sbjct: 60  AFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRI 119

Query: 182 TVD------TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
             D        S LV  Y  + +  +A+  F  M  +G  P   A +++++ L + R   
Sbjct: 120 HDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR--- 176

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
                               TN+V  W          +V+++M   G+ PN++ ++++I 
Sbjct: 177 -------------------LTNMV--W----------KVYKKMVRVGVVPNIHIFNVLIH 205

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           A C+ G + +A  +  EM      P+  T+N L+ ++ K     + L + ++M+R G   
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D +TYN LI   C++G++ +A+++   +   G  PN  T+  +     ++ D+  A R+ 
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLR 323

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
             M+     P  VTYN +++            +L  EM E +VEP+  T   LI  YC +
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           G   +A K  ++M+E   LKP    ++ ++    +  ++   +E + +M+D GF+
Sbjct: 384 GDMGSAMKVKKKMLEAG-LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 170/396 (42%), Gaps = 43/396 (10%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            R   V +  +++ +I+   K    + A   ++ M+SR +   + T++ L+  Y + G+ 
Sbjct: 189 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMH 248

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLV 259
            EA+   +RME  G +PD + ++ +I   CR+ R  EA   F  +     P+ + YT L+
Sbjct: 249 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA-TPNHVTYTTLI 307

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYS---------------------------- 291
            G+CR  ++ EA R+   M++ G+ P V TY+                            
Sbjct: 308 DGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVE 367

Query: 292 -------IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                   +I+A C+ G +  A  V  +MLE G +P+  TF  L+    K    +   + 
Sbjct: 368 PDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEF 427

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             +M   G      TY++L+D +      E  I++ + + RKG   + S +  + R + K
Sbjct: 428 LFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCK 487

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           +  +  A R++  M+    + ++V Y  L   +  +        +  EM++  +   +  
Sbjct: 488 IDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKI 547

Query: 465 YRILITMYCGMGH-----WNNAYKYIREMIEEKCLK 495
           YR     Y G G      W++  +  R +I +  LK
Sbjct: 548 YRCFSASYAGDGSILGLFWDHVIE--RRLISKNILK 581


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 183/378 (48%), Gaps = 3/378 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  MIN     +   LA   ++ M    ++  V  +S L+  Y   G   EA    + M 
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G APD   ++ +IS L +  +  EA ++   ++ +  +PD + +   + G+ + G ++
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA + F EM   G+ PN   Y+++I+   + G +  A  +F  +  +G  P+  T +  +
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
              +K  R ++ L+V++++K  G   D  TY+ LI   CK G++E A ++ + M  KG  
Sbjct: 532 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 591

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PN   +N +   + K GD+  A +++  M +   EP++VTY+ ++  +  S++      L
Sbjct: 592 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 651

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
             EM    V+P+   Y  L+   C  G    A    REM+++      S  +  ++    
Sbjct: 652 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS--FNTLIDGYC 709

Query: 510 RAGQLQKHEELVEKMVDR 527
           ++ ++Q+  +L ++M+ +
Sbjct: 710 KSCKIQEASQLFQEMIAK 727



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 218/465 (46%), Gaps = 28/465 (6%)

Query: 84  SLNPD-FTIPSLSLGFSQISTA------------HSISPSTVRHVIEKSCGVRHGIPLLQ 130
            L PD  T  +  LG+S+                H + P+   + +  +   + G  L++
Sbjct: 449 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG-NLME 507

Query: 131 VLSFFNWVTAR---PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
            LS F  + A    P+        H ++   G+V++   A      +K + +   V T+S
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLK-NGRVQE---ALKVFSELKEKGLVPDVFTYS 563

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            L+  + + G   +A    + M   G AP+   ++ ++  LC+      A+  FD + +K
Sbjct: 564 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 623

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             EPD + Y+ ++ G+C++ N++EA  +F EM   G+QP+ + Y+ ++   C+ G + +A
Sbjct: 624 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 683

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            ++F EML+ G    +++FN L+  + K+ + ++  Q++ +M       D +TY  +ID 
Sbjct: 684 MNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 742

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           HCK GK+E+A  +   M  +    +  T+  +    +KLG  +    ++ KM     +P+
Sbjct: 743 HCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 802

Query: 427 TVTYNILMQMFATSKSTDMV--LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
            VTY ++  ++A  K  ++V   KL+ E+    +      + +LIT  C       A K 
Sbjct: 803 EVTYGLV--IYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 860

Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           + EM  E  LKP  +    +++    AG++ +   + E +   G 
Sbjct: 861 LDEM-GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGL 904



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 180/416 (43%), Gaps = 37/416 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  + + A   +  M +   +    TF +L+  Y R      A+   + ME
Sbjct: 282 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 341

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
           +    P  +++  +I+ LC  +  S A    + +     +P+V+VY+ L+ G+   G I 
Sbjct: 342 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 401

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI-------------------------- 303
           EA R+   M  +G+ P+++ Y+ +I  L + G++                          
Sbjct: 402 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 461

Query: 304 ---------TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
                    T A   F EML+ G  PN+  +  L+  H KA    + L ++  +  LG  
Sbjct: 462 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 521

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D  T +  I    K+G++++A+KV + +  KG  P+  T++ +     K G+V  A  +
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 581

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +M      PN   YN L+     S       KL   M E  +EP+  TY  +I  YC 
Sbjct: 582 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 641

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             +   A+    EM   K ++P S VY  ++    + G ++K   L  +M+ +GF 
Sbjct: 642 SENVAEAFSLFHEM-PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 161/344 (46%), Gaps = 17/344 (4%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           F IL+  Y R G+  EA + F     +    D I  S+   I C   R+   +       
Sbjct: 159 FDILIDSYKRMGMLDEAANVF-----FVAKNDSILISL---IRCNSLRSMGEKGLV---- 206

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
               P+   YT +  G CRA  ++EA+  F EM+  G++P+    S +ID   R G I  
Sbjct: 207 ----PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 262

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
              +   M+  G   N IT+N L+    K  + EK  ++   M  LGC+ ++ T+  LI+
Sbjct: 263 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 322

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            +C++  +  A+++L+ M ++   P+A ++  +   +    D++ A+++  KM     +P
Sbjct: 323 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 382

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N V Y+ L+  +A+    +   +L   M  + V P++  Y  +I+     G    A  Y+
Sbjct: 383 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 442

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            E I+ + LKP +  +   +    + G++ +  +  ++M+D G 
Sbjct: 443 LE-IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 485



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 157/320 (49%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +++   K      A    D M  + +E    T+S ++  Y ++   AEA   F+ M
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              G  P    ++ ++   C++    +A + F  +  K     + +  L+ G+C++  I 
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 715

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++F+EM    I P+  TY+ VID  C+ G++  A+ +F EM E     +++T+ +LM
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + K  ++ +V  ++ +M   G + D +TY  +I  HCK+  L +A K+ + +V KG  
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
              +  +++   + K  D+  A ++  +M +L  +P+    + L++ F  +   D   ++
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895

Query: 450 KKEMEENEVEPNVNTYRILI 469
            + ++   + P+  T   L+
Sbjct: 896 FEGVKSLGLVPDTTTLIDLV 915



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 185/423 (43%), Gaps = 45/423 (10%)

Query: 148 PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           P+ Y   I  AG  + ++ + A    + M+   ++   +  S L+  ++R G   E +  
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCR 264
            + M   G   + I ++++I  LC+  +  +A      +     +P+   +  L+ G+CR
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             N+  A  +  EM+   + P+  +Y  +I+ LC C  ++ A+ +  +M   G +PN + 
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           ++ L+  +    R E+  ++ + M   G   D   YN +I C  K GK+E+A   L  + 
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM---------- 434
            +G  P+A TF       SK G +  A + + +M D    PN   Y +L+          
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 506

Query: 435 -------QMFATSKSTDM------------------VLKLKKEMEENEVEPNVNTYRILI 469
                   + A     D+                   LK+  E++E  + P+V TY  LI
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLK---PGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           + +C  G    A+    E+ +E CLK   P   +Y  ++  L ++G +Q+  +L + M +
Sbjct: 567 SGFCKQGEVEKAF----ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 527 RGF 529
           +G 
Sbjct: 623 KGL 625



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 36/239 (15%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           T  +F+ L+  Y ++    EA   F  M      PD + ++ VI   C+  +  EA   F
Sbjct: 697 TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 756

Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI------ 294
             ++++    D + YT+L+ G+ + G  SE   +F +M   G++P+  TY +VI      
Sbjct: 757 KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 816

Query: 295 -----------------------------DALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
                                         ALC+   +T A  +  EM E+G +P+    
Sbjct: 817 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 876

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + L+R   +A + ++  +V+  +K LG   DT T   L++ +  D   EDA  ++  +V
Sbjct: 877 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 170/328 (51%), Gaps = 3/328 (0%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD+  Y  +I+      +++ A    + M    V   V TF++L+    +AG   EA H
Sbjct: 270 SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               M + G +PD   ++ +I   C + R  +A+  F S++ K  E D + Y  L+ G+C
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYC 389

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           ++G + EA++++REM    I P V TY+ ++  L R G++  A ++F EM      P S 
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+    K +   + +++++ ++    +     +N LID  CK  K+E A ++ N +
Sbjct: 450 TYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRL 509

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             +G  PN  T+ ++   + K G +  A  ++  M++  C PN VT+N LM+ F  +   
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEM 569

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITM 471
             V++L +EM E +  P+ +T  I++ +
Sbjct: 570 QKVVELLQEMAEKDFSPDASTISIVVDL 597



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 161/314 (51%), Gaps = 2/314 (0%)

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
           P+ + +  +I  LC+     + +  F  +K +   PDV+ Y++++ G C  G    A+ +
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           F EM   G+ PNV T++++IDALC+ G++  A+ +   M++ G  P++ T+N L+     
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
             R +    ++  M+  G E D ++YN LI+ +CK G++ +A K+   M+ K   P   T
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N +   + + G V  A  ++G+MK     P + TYNIL+     +      ++L   +E
Sbjct: 416 YNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
            ++ +P++  +  LI   C       A +    +  E  L+P    Y +++  L ++GQL
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG-LEPNVITYTVMIHGLCKSGQL 534

Query: 515 QKHEELVEKMVDRG 528
           +  ++L   M ++G
Sbjct: 535 ENAKDLFLGMEEKG 548



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 177/386 (45%), Gaps = 21/386 (5%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y ++I+L  ++    LA  FI             T +IL+  Y         +     M 
Sbjct: 108 YFDVISLYKRMSLIGLAPDFI-------------TLNILINCYCNLNKVDFGLAVLGEML 154

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G +P+ + F+ ++  LC   R SEA      + +  + P+V+ Y  L+ G C  GN  
Sbjct: 155 RRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTM 214

Query: 270 EAERVFREMKMAG------IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            A ++  EM          I+PN+  Y  +ID+LC+ G I +  ++F EM   G  P+ +
Sbjct: 215 LAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVV 274

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +++++       R E    ++N+M   G   + +T+N LID  CK GK+E+A  +L  M
Sbjct: 275 AYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM 334

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           +++G +P+  T+N +       G ++ A  ++  M+    E + V+YN+L+  +  S   
Sbjct: 335 IQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
               KL +EM   E+ P V TY  L+T     G   +A+    EM     L P S  Y +
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD-LTPESCTYNI 453

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           +L  L +   L +  EL   + +  F
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDF 479



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 177/384 (46%), Gaps = 10/384 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +IN    + + D     +  M  R       TF+ LV+        +EA     +M   G
Sbjct: 133 LINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-------KFEPDVIVYTNLVRGWCRAG 266
             P+ + +  +++ LC       A    + + +         +P+++ Y  ++   C+ G
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            I + + +F EMK  GI P+V  YS +I  +C  G+   A  +F EM++ G  PN +TFN
Sbjct: 253 LIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFN 312

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    KA + E+   +   M + G   DT TYN LID  C +G+++DA  +  SM  K
Sbjct: 313 VLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK 372

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDM 445
           G   +A ++N++     K G +  A ++Y +M   +  P  +TYN L+  +F   K  D 
Sbjct: 373 GIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD- 431

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L  EM+ +++ P   TY IL+   C   H + A +     +E    +P   ++  ++
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFH-YLENHDFQPSIQIFNCLI 490

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
             L +A +++   EL  ++   G 
Sbjct: 491 DGLCKARKIEIARELFNRLSHEGL 514



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 177/396 (44%), Gaps = 6/396 (1%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
           VT +P  V     Y  +I+   K    D        MK R +   V  +S ++      G
Sbjct: 232 VTIKPNLV----CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTG 287

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYT 256
               A   FN M + G  P+ + F+++I  LC+  +  EA      +  + E PD   Y 
Sbjct: 288 RWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYN 347

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L+ G+C  G I +A  +F  M+  GI+ +  +Y+++I+  C+ G++  A  ++ EM+  
Sbjct: 348 TLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
              P  IT+N L+    +  +      ++ +MK      ++ TYN L+D  CK+  L +A
Sbjct: 408 EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEA 467

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
           +++ + +      P+   FN +   + K   +  A  ++ ++     EPN +TY +++  
Sbjct: 468 MELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHG 527

Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
              S   +    L   MEE    PN+ T+  L+  +C         + ++EM  EK   P
Sbjct: 528 LCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM-AEKDFSP 586

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
            +S   +V+  L +  + +++  L+     +G T R
Sbjct: 587 DASTISIVVDLLSKDEKYREYLHLLPTFPAQGQTGR 622



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 44/274 (16%)

Query: 298 CRCGQITR--AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
           C+ G I R  A  VF  ++++   P   +FN L+    K  R   V+ +Y +M  +G   
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D IT N LI+C+C   K++  + VL  M+R+G +PN  TF  + + +     ++ A  + 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK------------------------ 451
            KM  +   PN VTY  L+     + +T + +KL +                        
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 452 -----------------EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                            EM+   + P+V  Y  +I   C  G W  A     EM++E  +
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG-V 304

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            P    + +++  L +AG++++   L++ M+ RG
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRG 338



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 10/324 (3%)

Query: 215 APDKIAFSIVISILCRKR--RASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEA 271
           APD+      +   C+    + SEA S F+ L D +  P +  +  L+    +     + 
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             +++ M + G+ P+  T +I+I+  C   ++     V  EML  G  PN++TF +L++ 
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG---- 387
               SR  +   +  +M R+G   + +TY  L++  C  G    A+K+   M+       
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231

Query: 388 --CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
               PN   +  I   + K G ++    ++ +MK     P+ V Y+ ++     +   + 
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              L  EM +  V PNV T+ +LI   C  G    A   ++ MI ++   P +  Y  ++
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMI-QRGESPDTFTYNTLI 350

Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
                 G++    +L   M  +G 
Sbjct: 351 DGFCLEGRIDDARDLFVSMESKGI 374



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 7/218 (3%)

Query: 320 PNSITFNNLMRVHVKASRTEK--VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
           P+     N ++ + K+   ++     V+N +  +       ++N L+    K  +  D I
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            +   M   G  P+  T N++  C   L  V+    + G+M      PNTVT+  L++  
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK----- 492
                      L ++M      PNV TY  L+   C  G+   A K   EM+        
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +KP    Y  ++  L + G + K +EL  +M  RG +
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGIS 270



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/198 (19%), Positives = 83/198 (41%), Gaps = 40/198 (20%)

Query: 104 AHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
            H ++P +  +  +++  C   H   L + +  F+++    +F  S  +++ +I+   K 
Sbjct: 441 VHDLTPESCTYNILLDGLCKNNH---LSEAMELFHYLENH-DFQPSIQIFNCLIDGLCKA 496

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R+ ++A    + +    +E  V T+++++    ++G    A   F  MEE GCAP+ + F
Sbjct: 497 RKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTF 556

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           +                                   L+RG+C+   + +   + +EM   
Sbjct: 557 N----------------------------------TLMRGFCQNDEMQKVVELLQEMAEK 582

Query: 282 GIQPNVYTYSIVIDALCR 299
              P+  T SIV+D L +
Sbjct: 583 DFSPDASTISIVVDLLSK 600


>gi|357455405|ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355487031|gb|AES68234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 188/383 (49%), Gaps = 21/383 (5%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEI-TVDTFSI 188
           + L FFNWV  + +F HS + Y+ ++++ GK  +F   W+ I  M+     +    TF +
Sbjct: 92  RALEFFNWVETKFKFQHSTETYNLVLDILGKFFEFQQCWNLIHRMRQNPHSLPNHTTFRV 151

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF-FDSLKDK 247
           + +RYV A    +AV+ F R+ E+    D+ +FS +I  LC  +   EAQ   F   K++
Sbjct: 152 MFKRYVSAHCVQDAVNTFQRLNEFNL-KDETSFSNLIDALCEYKHVLEAQDLVFGDKKNQ 210

Query: 248 FEPDVI--------------VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
               ++              ++  ++RGW + G  S+    + EM   G++ ++++YSI 
Sbjct: 211 TLTWIVDGVDGFVASSKNTKIFNIVLRGWYKLGWWSKCWEFWDEMDRRGVEKDLHSYSIY 270

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           +D L + G+  +A  +F EM   G + + + +N ++R    +   +  ++++ +MK LG 
Sbjct: 271 MDILSKGGKPWKAVKLFKEMKRKGIQLDVVVYNIVIRAIGVSQGVDFSIRMFCEMKDLGL 330

Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
               +TYN +I   C   + ++A+ ++ +M R GC+PNA ++   F C+ K   +     
Sbjct: 331 NPTVVTYNTIIRLLCDSYRYKEALTLIRTMRRDGCSPNAVSYQCFFACLEKPKFII---E 387

Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
           ++  M +    P   TY +L++ FA      +V  +   MEE    P+ + Y  LI    
Sbjct: 388 LFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFLVWNRMEELGCSPDASAYNALIDALV 447

Query: 474 GMGHWNNAYKYIREMIEEKCLKP 496
             G  + A KY  EM+  K L P
Sbjct: 448 EKGLIDMARKYDEEML-AKGLSP 469


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 188/381 (49%), Gaps = 2/381 (0%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V S   Y  ++   GK R  +     +  M++  V+  V +++I +R   +A    EA  
Sbjct: 227 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 286

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWC 263
              +ME  GC PD I  +++I +LC   R S+A+  F  +K   + PD + Y  L+  + 
Sbjct: 287 ILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFG 346

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G+      ++  MK  G   NV  Y+ VIDALC+ G++  A ++F EM + G  P   
Sbjct: 347 DNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQY 406

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++N+L+   +KA R    L+++  M   G + +  T+   I+ + K G+   AI+    M
Sbjct: 407 SYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELM 466

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  P+    N +   ++K G +  A R++ ++K +   P+T+TY ++++  + +   
Sbjct: 467 KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF 526

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  +K+  +M EN   P+V     LI      G  + A++   ++ +E  L+P    Y  
Sbjct: 527 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL-KEMNLEPTDGTYNT 585

Query: 504 VLQQLRRAGQLQKHEELVEKM 524
           +L  L R G++++   L+E+M
Sbjct: 586 LLAGLGREGKVKEVMHLLEEM 606



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 37/394 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y   I + G+ ++FD A+  +  M++   +  V T ++L++    AG  ++A   F +M+
Sbjct: 268 YTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMK 327

Query: 211 EYGCAPDKI-----------------------------------AFSIVISILCRKRRAS 235
           +    PD++                                   A++ VI  LC+  R  
Sbjct: 328 KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVF 387

Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA   FD +K K   P+   Y +L+ G+ +A    +A  +F+ M + G +PN YT+ + I
Sbjct: 388 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 447

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +   + G+  +A   +  M   G  P+ +  N ++    K+ R     +V++++K +G  
Sbjct: 448 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 507

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            DTITY  +I C  K  K ++A+K+   M+   C P+    N +   + K G  + A R+
Sbjct: 508 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 567

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + ++K++  EP   TYN L+           V+ L +EM  +   PN+ TY  ++   C 
Sbjct: 568 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 627

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            G  N+A   +  M  + C+ P  S Y  V+  L
Sbjct: 628 NGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGL 660



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 10/390 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLA-GKVRQFDLAWHFIDLMKSRNVEITVDTFS- 187
           + L  F     +P   H+    + M+ L  G  R  D+A  F D+M+ + V+  V TF+ 
Sbjct: 107 EALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVF-DVMQRQIVKANVGTFAA 165

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
           I     V  GL +  V A   M+E G   +   ++ ++  L +     EA   +  +  D
Sbjct: 166 IFGGLGVEGGLRSAPV-ALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVD 224

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P V  Y+ L+  + +  ++     + REM+  G++PNVY+Y+I I  L +  +   A
Sbjct: 225 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 284

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + + A+M   GC+P+ IT   L++V   A R      V+ +MK+   + D +TY  L+D 
Sbjct: 285 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 344

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
              +G  +  +++ N+M   G N N   +  +   + ++G V  A  M+ +MK     P 
Sbjct: 345 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 404

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             +YN L+  F  +      L+L K M+ +  +PN  T+ + I  Y   G    + K I+
Sbjct: 405 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY---GKSGESIKAIQ 461

Query: 487 --EMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
             E+++ K + P       VL  L ++G+L
Sbjct: 462 RYELMKSKGIVPDVVAGNAVLFGLAKSGRL 491



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 1/272 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  +F  A      M     +    T  + +  Y ++G + +A+  +  M+
Sbjct: 408 YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 467

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD +A + V+  L +  R   A+  F  LK     PD I YT +++   +A    
Sbjct: 468 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 527

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++F +M      P+V   + +ID L + G+   A  +F ++ E+  EP   T+N L+
Sbjct: 528 EAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 587

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  + ++V+ +  +M       + ITYN ++DC CK+G + DA+ +L SM  KGC 
Sbjct: 588 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 647

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           P+ S++N +   + K    N A  ++ +MK +
Sbjct: 648 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 679



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 166/390 (42%), Gaps = 71/390 (18%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ ++   G+  +     H ++ M   N    + T++ ++    + G   +A+     M 
Sbjct: 583 YNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT 642

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
             GC PD  +++ VI  L ++ R +EA S F  +K    PD      ++  + + G + E
Sbjct: 643 TKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKE 702

Query: 271 AERVFRE---------------------MKMAGIQPNVYTYSIV---------------I 294
           A  + ++                     +K AGI+ ++    I+               I
Sbjct: 703 ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLI 762

Query: 295 DALCR------------------------------CGQITR-----AHDVFAEMLEVGCE 319
             LC+                              CG +       A  +FAEM E+GC 
Sbjct: 763 KHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 822

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+  T+N L+    K+ R E++L+V  +M R G E+  +TYN +I    K  +LE AI +
Sbjct: 823 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 882

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
             +++ +G +P   T+  +   + K G +  A  ++ +M +  C+ N   YNIL+     
Sbjct: 883 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 942

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
           + +T+ V  L ++M +  + P++ +Y I+I
Sbjct: 943 AGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/432 (22%), Positives = 184/432 (42%), Gaps = 10/432 (2%)

Query: 104 AHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY--HEMINLAGKV 161
           A  +SP T+ + +   C  +       V  F++ +    E    PD+   + +I+   K 
Sbjct: 503 AMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI----ENNCVPDVLAVNSLIDTLYKA 558

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
            + D AW     +K  N+E T  T++ L+    R G   E +H    M      P+ I +
Sbjct: 559 GRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 618

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + ++  LC+    ++A     S+  K   PD+  Y  ++ G  +    +EA  +F +MK 
Sbjct: 619 NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 678

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRA-HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             I P+  T   ++ +  + G +  A H +    L+ G + +  + ++LM   +K +  E
Sbjct: 679 VLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 737

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           K ++    +   G   D      LI   CK  K  +A +++      G +     +N + 
Sbjct: 738 KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLI 797

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             +     ++ A  ++ +MK+L C P+  TYN+L+     S   + +LK+++EM     E
Sbjct: 798 CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 857

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
               TY  +I+          A      ++ +    P    Y  +L  L +AG+++  E 
Sbjct: 858 STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAEN 916

Query: 520 LVEKMVDRGFTA 531
           L  +M++ G  A
Sbjct: 917 LFNEMLEYGCKA 928



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 1/200 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +   KS  V +    ++ L+   V   L   A   F  M+E GC PD+  +++++ 
Sbjct: 774 AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 833

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            + +  R  E     + +  K +E   + Y  ++ G  ++  + +A  ++  +   G  P
Sbjct: 834 AMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 893

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
              TY  ++D L + G+I  A ++F EMLE GC+ N   +N L+  H  A  TEKV  ++
Sbjct: 894 TPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLF 953

Query: 346 NQMKRLGCEADTITYNFLID 365
             M   G   D  +Y  +ID
Sbjct: 954 QDMVDQGINPDIKSYTIIID 973


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 188/381 (49%), Gaps = 2/381 (0%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V S   Y  ++   GK R  +     +  M++  V+  V +++I +R   +A    EA  
Sbjct: 192 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 251

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWC 263
              +ME  GC PD I  +++I +LC   R S+A+  F  +K   + PD + Y  L+  + 
Sbjct: 252 ILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFG 311

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G+      ++  MK  G   NV  Y+ VIDALC+ G++  A ++F EM + G  P   
Sbjct: 312 DNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQY 371

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++N+L+   +KA R    L+++  M   G + +  T+   I+ + K G+   AI+    M
Sbjct: 372 SYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELM 431

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  P+    N +   ++K G +  A R++ ++K +   P+T+TY ++++  + +   
Sbjct: 432 KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF 491

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  +K+  +M EN   P+V     LI      G  + A++   ++ +E  L+P    Y  
Sbjct: 492 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL-KEMNLEPTDGTYNT 550

Query: 504 VLQQLRRAGQLQKHEELVEKM 524
           +L  L R G++++   L+E+M
Sbjct: 551 LLAGLGREGKVKEVMHLLEEM 571



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 2/343 (0%)

Query: 167  AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            A   +   KS  V +    ++ L+   V   L   A   F  M+E GC PD+  +++++ 
Sbjct: 739  AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 798

Query: 227  ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             + +  R  E     + +  K +E   + Y  ++ G  ++  + +A  ++  +   G  P
Sbjct: 799  AMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 858

Query: 286  NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
               TY  ++D L + G+I  A ++F EMLE GC+ N   +N L+  H  A  TEKV  ++
Sbjct: 859  TPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLF 918

Query: 346  NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
              M   G   D  +Y  +ID  CK G+L D +     ++  G  P+  T+N++   + K 
Sbjct: 919  QDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKS 978

Query: 406  GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
              +  A  ++ +M+     PN  TYN L+     +       K+ +E+     +PNV TY
Sbjct: 979  KRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1038

Query: 466  RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
              LI  Y   G  ++AY     MI   CL P SS Y  +  QL
Sbjct: 1039 NALIRGYSVSGSTDSAYAAYGRMIVGGCL-PNSSTYMQLPNQL 1080



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 37/394 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y   I + G+ ++FD A+  +  M++   +  V T ++L++    AG  ++A   F +M+
Sbjct: 233 YTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMK 292

Query: 211 EYGCAPDKI-----------------------------------AFSIVISILCRKRRAS 235
           +    PD++                                   A++ VI  LC+  R  
Sbjct: 293 KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVF 352

Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA   FD +K K   P+   Y +L+ G+ +A    +A  +F+ M + G +PN YT+ + I
Sbjct: 353 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 412

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +   + G+  +A   +  M   G  P+ +  N ++    K+ R     +V++++K +G  
Sbjct: 413 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 472

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            DTITY  +I C  K  K ++A+K+   M+   C P+    N +   + K G  + A R+
Sbjct: 473 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 532

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + ++K++  EP   TYN L+           V+ L +EM  +   PN+ TY  ++   C 
Sbjct: 533 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 592

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            G  N+A   +  M  + C+ P  S Y  V+  L
Sbjct: 593 NGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGL 625



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 193/443 (43%), Gaps = 75/443 (16%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GKV++     H ++ M   N    + T++ ++    + G   +A+     M   GC PD 
Sbjct: 559 GKVKE---VMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDL 615

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE- 277
            +++ VI  L ++ R +EA S F  +K    PD      ++  + + G + EA  + ++ 
Sbjct: 616 SSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDY 675

Query: 278 --------------------MKMAGIQPNVYTYSIV---------------IDALCR--- 299
                               +K AGI+ ++    I+               I  LC+   
Sbjct: 676 FLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 735

Query: 300 ---------------------------CGQITR-----AHDVFAEMLEVGCEPNSITFNN 327
                                      CG +       A  +FAEM E+GC P+  T+N 
Sbjct: 736 ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 795

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+    K+ R E++L+V  +M R G E+  +TYN +I    K  +LE AI +  +++ +G
Sbjct: 796 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 855

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
            +P   T+  +   + K G +  A  ++ +M +  C+ N   YNIL+     + +T+ V 
Sbjct: 856 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 915

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L ++M +  + P++ +Y I+I   C  G  N+   Y R+++E   L+P    Y +++  
Sbjct: 916 HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG-LEPDLITYNLLIDG 974

Query: 508 LRRAGQLQKHEELVEKMVDRGFT 530
           L ++ +L++   L  +M  +G  
Sbjct: 975 LGKSKRLEEAVSLFNEMQKKGIV 997



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 188/406 (46%), Gaps = 10/406 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLA-GKVRQFDLAWHFIDLMKSRNVEITVDTFS- 187
           + L  F     +P   H+    + M+ L  G  R  D+A  F D+M+ + V+  V TF+ 
Sbjct: 72  EALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVF-DVMQRQIVKANVGTFAA 130

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
           I     V  GL +  V A   M+E G   +   ++ ++  L +     EA   +  +  D
Sbjct: 131 IFGGLGVEGGLRSAPV-ALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVD 189

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P V  Y+ L+  + +  ++     + REM+  G++PNVY+Y+I I  L +  +   A
Sbjct: 190 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 249

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + + A+M   GC+P+ IT   L++V   A R      V+ +MK+   + D +TY  L+D 
Sbjct: 250 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 309

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
              +G  +  +++ N+M   G N N   +  +   + ++G V  A  M+ +MK     P 
Sbjct: 310 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 369

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             +YN L+  F  +      L+L K M+ +  +PN  T+ + I  Y   G    + K I+
Sbjct: 370 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY---GKSGESIKAIQ 426

Query: 487 --EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             E+++ K + P       VL  L ++G+L   + +  ++   G +
Sbjct: 427 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 472



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 132/270 (48%), Gaps = 1/270 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  +F  A      M     +    T  + +  Y ++G + +A+  +  M+
Sbjct: 373 YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 432

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD +A + V+  L +  R   A+  F  LK     PD I YT +++   +A    
Sbjct: 433 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 492

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++F +M      P+V   + +ID L + G+   A  +F ++ E+  EP   T+N L+
Sbjct: 493 EAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 552

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  + ++V+ +  +M       + ITYN ++DC CK+G + DA+ +L SM  KGC 
Sbjct: 553 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 612

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
           P+ S++N +   + K    N A  ++ +MK
Sbjct: 613 PDLSSYNTVIYGLVKEERYNEAFSIFCQMK 642



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 126/249 (50%), Gaps = 7/249 (2%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +I+   K R+ + A      + S+    T  T+  L+   ++AG   +A + FN M 
Sbjct: 828  YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 887

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQS----FFDSLKDKFEPDVIVYTNLVRGWCRAG 266
            EYGC  +   ++I+++     R A   +     F D +     PD+  YT ++   C+AG
Sbjct: 888  EYGCKANCTIYNILLN---GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 944

Query: 267  NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
             +++    FR++   G++P++ TY+++ID L +  ++  A  +F EM + G  PN  T+N
Sbjct: 945  QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1004

Query: 327  NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +L+    KA +  +  ++Y ++   G + +  TYN LI  +   G  + A      M+  
Sbjct: 1005 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1064

Query: 387  GCNPNASTF 395
            GC PN+ST+
Sbjct: 1065 GCLPNSSTY 1073



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 1/218 (0%)

Query: 144  FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            F  +P  Y  +++   K  + + A +  + M     +     ++IL+  +  AG   +  
Sbjct: 856  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 915

Query: 204  HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
            H F  M + G  PD  +++I+I  LC+  + ++  ++F  L +   EPD+I Y  L+ G 
Sbjct: 916  HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 975

Query: 263  CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
             ++  + EA  +F EM+  GI PN+YTY+ +I  L + G+   A  ++ E+L  G +PN 
Sbjct: 976  GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNV 1035

Query: 323  ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
             T+N L+R +  +  T+     Y +M   GC  ++ TY
Sbjct: 1036 FTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/432 (22%), Positives = 184/432 (42%), Gaps = 10/432 (2%)

Query: 104 AHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY--HEMINLAGKV 161
           A  +SP T+ + +   C  +       V  F++ +    E    PD+   + +I+   K 
Sbjct: 468 AMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI----ENNCVPDVLAVNSLIDTLYKA 523

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
            + D AW     +K  N+E T  T++ L+    R G   E +H    M      P+ I +
Sbjct: 524 GRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 583

Query: 222 SIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           + ++  LC+    ++A     S+  K   PD+  Y  ++ G  +    +EA  +F +MK 
Sbjct: 584 NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 643

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRA-HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
             I P+  T   ++ +  + G +  A H +    L+ G + +  + ++LM   +K +  E
Sbjct: 644 VLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 702

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           K ++    +   G   D      LI   CK  K  +A +++      G +     +N + 
Sbjct: 703 KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLI 762

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             +     ++ A  ++ +MK+L C P+  TYN+L+     S   + +LK+++EM     E
Sbjct: 763 CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 822

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
               TY  +I+          A      ++ +    P    Y  +L  L +AG+++  E 
Sbjct: 823 STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAEN 881

Query: 520 LVEKMVDRGFTA 531
           L  +M++ G  A
Sbjct: 882 LFNEMLEYGCKA 893


>gi|357454671|ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
 gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355486664|gb|AES67867.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
          Length = 527

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 182/391 (46%), Gaps = 5/391 (1%)

Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
           FFNW   +P        YH ++   G+ + F      +D M+   ++  +   SI++  +
Sbjct: 122 FFNWALKQPMVPRDVGSYHVIVKALGRRKFFVFMMQVLDEMRLNGIKADLLMLSIVIDSF 181

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
           V AG  ++A+  F  +++ G   D    ++++S LCR+     A S F+S+K K   +V 
Sbjct: 182 VNAGHVSKAIQLFGNLDDLGLCRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSFNVD 241

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            Y  +V GW + G ++E E+V +EM++ G  P+  T +  ++ L R G++  A +VF  M
Sbjct: 242 TYNVVVGGWSKLGRVNEIEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSM 301

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
                E ++  +N ++   +     +  ++ YN M    CE +  TY+ +I    +  K+
Sbjct: 302 ----KEKDTAIYNAMIFNFISIGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKV 357

Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
            DA+ + + M+R+G  P   T     + +   G    A  +Y K + L+C+ +   Y IL
Sbjct: 358 ADALLMFDEMLRQGVVPPTGTITSFIKQLCSYGPPYAAMMIYKKTRKLECKISMEAYKIL 417

Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
           +   +       +L + +EM+E     +V  Y  +I+    +G   NA   + E +  K 
Sbjct: 418 LMRLSKFGKCGSLLSVWQEMQECGYSSDVEVYEYIISGLYNIGQLENAVLVMEEAL-RKG 476

Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             P   VY  +  +L  +   ++   L  K+
Sbjct: 477 FCPSRLVYSKLSNKLLASNLTERAYRLFLKI 507



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 39/292 (13%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           MK + V   VDT++++V  + + G   E       ME  G +PD    +  +  L R  R
Sbjct: 232 MKGK-VSFNVDTYNVVVGGWSKLGRVNEIEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGR 290

Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
             EA   F S+K+K   D  +Y  ++  +   G+     + +  M     +PN++TYS +
Sbjct: 291 MDEAVEVFGSMKEK---DTAIYNAMIFNFISIGDFDGFMKYYNGMLSDNCEPNIHTYSRM 347

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL-------------MRVHVKASRTE- 339
           I A  R  ++  A  +F EML  G  P + T  +              M ++ K  + E 
Sbjct: 348 ITAFLRTRKVADALLMFDEMLRQGVVPPTGTITSFIKQLCSYGPPYAAMMIYKKTRKLEC 407

Query: 340 ---------------------KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
                                 +L V+ +M+  G  +D   Y ++I      G+LE+A+ 
Sbjct: 408 KISMEAYKILLMRLSKFGKCGSLLSVWQEMQECGYSSDVEVYEYIISGLYNIGQLENAVL 467

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           V+   +RKG  P+   ++ +   +        A+R++ K+K  +   N  +Y
Sbjct: 468 VMEEALRKGFCPSRLVYSKLSNKLLASNLTERAYRLFLKIKHARSLKNARSY 519


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 184/383 (48%), Gaps = 12/383 (3%)

Query: 148 PDL--YHEMINL---AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           PDL  Y+ +IN    AG +R+       +D MKS  ++  V T++ L+      GL+ EA
Sbjct: 308 PDLCTYNILINGLCNAGSMRE---GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVR 260
                +ME  G   +++  +I +  LC++ +          L D   F PD++ Y  L++
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424

Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
            + + G++S A  + REM   GI+ N  T + ++DALC+  ++  AH++     + G   
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           + +T+  L+    +  + EK L+++++MK++       T+N LI   C  GK E A++  
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + +   G  P+ STFN I     K G V  A   Y +      +P+  T NIL+      
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
             T+  L     + E E E +  TY  +I+ +C       AY  + EM EEK L+P    
Sbjct: 605 GMTEKALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEM-EEKGLEPDRFT 662

Query: 501 YEMVLQQLRRAGQLQKHEELVEK 523
           Y   +  L   G+L + +EL++K
Sbjct: 663 YNSFISLLMEDGKLSETDELLKK 685



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 188/379 (49%), Gaps = 7/379 (1%)

Query: 143 EFVHSPD--LYHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           EF  +PD   Y+ ++  ++ K R  DL    +D+ K+  V   V T++ LV  Y + G  
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV-TYNNLVYGYCKLGSL 291

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNL 258
            EA      M++    PD   ++I+I+ LC      E     D++K  K +PDV+ Y  L
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-G 317
           + G    G   EA ++  +M+  G++ N  T++I +  LC+  +         E++++ G
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P+ +T++ L++ ++K       L++  +M + G + +TIT N ++D  CK+ KL++A 
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            +LNS  ++G   +  T+  +     +   V  A  M+ +MK +K  P   T+N L+   
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                T++ ++   E+ E+ + P+ +T+  +I  YC  G    A+++  E I+    KP 
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH-SFKPD 590

Query: 498 SSVYEMVLQQLRRAGQLQK 516
           +    ++L  L + G  +K
Sbjct: 591 NYTCNILLNGLCKEGMTEK 609



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/533 (23%), Positives = 229/533 (42%), Gaps = 65/533 (12%)

Query: 43  PNSSPDTPFLSPEETLISE-KF---HSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGF 98
           P+ SP  P +S   +L+S  KF    SL+  + R +    S  N  L+P+  +       
Sbjct: 74  PSDSP-LPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHL------- 125

Query: 99  SQISTAHSISPSTVRHVIEKSCGVRHGIP--LLQVLSFFNWVTARPEFVHSPDLYHEMIN 156
                  S  PS     I  S  +  G P   LQ+      +  +P  +    L   +I 
Sbjct: 126 -------SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTL---LIG 175

Query: 157 LAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYG 213
           L      F +  A    D M    V + V TF++LV  Y   G   +A+    RM  E+ 
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235

Query: 214 CAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
             PD + ++ ++  + +K R S+ +    D  K+   P+ + Y NLV G+C+ G++ EA 
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           ++   MK   + P++ TY+I+I+ LC  G +    ++   M  +  +P+ +T+N L+   
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV-RKGCNPN 391
            +   + +  ++  QM+  G +A+ +T+N  +   CK+ K E   + +  +V   G +P+
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT------------------------ 427
             T++ + +   K+GD++GA  M  +M     + NT                        
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475

Query: 428 -----------VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
                      VTY  L+  F   +  +  L++  EM++ ++ P V+T+  LI   C  G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               A +   E+ E   L P  S +  ++    + G+++K  E   + +   F
Sbjct: 536 KTELAMEKFDELAESGLL-PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF 587


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 191/398 (47%), Gaps = 9/398 (2%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKV-RQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           + FF+W   +  + H    Y+ ++++  K    F     + DL+ S      + TF IL+
Sbjct: 11  IQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHS-GCSPNLVTFKILI 69

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFE 249
           R   +AG A  A+     ++E+  APD   F+++I  L +     +A   F++++  + +
Sbjct: 70  RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ--PNVYTYSIVIDALCRCGQITRAH 307
           P+++ Y  ++ G C++GN+ +A  +  EM   G +  P++ TY+ +I+A  R  +I  A 
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
               +M   G  P+ +T N L+    K    E+ L++ + MK  G   D ITYN +I   
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C  GK+ +A ++L +M    C+P+  TFN +     K G +  A  +  +M      P+ 
Sbjct: 250 CVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 306

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           +TY IL+          +   L +E+      P+V  Y  L+   C  G    A+K ++E
Sbjct: 307 ITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKE 366

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
           M    C + G  +Y  ++    RAG + K  E++ +MV
Sbjct: 367 MSVRGC-RTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 171/372 (45%), Gaps = 8/372 (2%)

Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           L++L         P+ +    + H +  +AGKV +        +++K+ +    + TF+ 
Sbjct: 224 LEILDGMKLAGPVPDVITYNSIIHALC-VAGKVVEA------AEILKTMSCSPDLVTFNT 276

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDK 247
           L+  + +AG+   A+     M      PD I ++I+++ LCR  +   A    + + +  
Sbjct: 277 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 336

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           + PDVI YT+LV G C++G I EA ++ +EM + G +  V  YS ++   CR G + +A 
Sbjct: 337 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAR 396

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
           ++ AEM+ +   P   T+N ++   +K     K + + + +   G   D +TYN LID  
Sbjct: 397 EILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 456

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           CK  ++ +A  + + M  +GC PN  T   +   + ++G V+ A  +  +M   +  PN 
Sbjct: 457 CKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNV 516

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           V Y  L+     S   D    +   M    V  +   YR LI      G    A     E
Sbjct: 517 VVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDE 576

Query: 488 MIEEKCLKPGSS 499
           M+    L  GS+
Sbjct: 577 MVARGFLPDGST 588



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 156/339 (46%), Gaps = 5/339 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPDL  ++ +++   K      A   ++ M   N+   V T++ILV    R G    A +
Sbjct: 268 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 327

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               +   G  PD IA++ ++  LC+     EA      +  +     V++Y++LV G+C
Sbjct: 328 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYC 387

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           RAGN+ +A  +  EM    + P ++TY+IV+  L + G I++A  + ++++  G  P+ +
Sbjct: 388 RAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVV 447

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N L+    KA+R  +   + ++M   GC  + +T   ++   C+ G+++DA  ++  M
Sbjct: 448 TYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEM 507

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
            RK   PN   +  +   + K   ++ A  +   M+      +   Y  L+   +     
Sbjct: 508 SRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRV 567

Query: 444 DMVLKLKKEMEENEVEPNVNTYRIL--ITMYCGMGHWNN 480
              + +  EM      P+ +T + L    M   +  W N
Sbjct: 568 AEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFEWTN 606



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 6/295 (2%)

Query: 237 AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
            + + D L     P+++ +  L+RG C+AG    A    R +    + P+VY ++++I  
Sbjct: 47  GKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHG 106

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA- 355
           L + G   +A  +F  M     +P  +T+N ++    K+   EK  ++  +M R G ++ 
Sbjct: 107 LFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSA 166

Query: 356 -DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D +TYN LI+   +  ++ +A      M   G NP+  T N++   I K GDV  A  +
Sbjct: 167 PDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEI 226

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
              MK     P+ +TYN ++     +       ++ K M      P++ T+  L+  +C 
Sbjct: 227 LDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCK 283

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            G    A + + EM  E  L P    Y +++  L R GQ+Q    L+E++V +G+
Sbjct: 284 AGMLPRALEVLEEMCRENIL-PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 337



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)

Query: 409 NGAHRMYGKM-KDL---KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           +G H   GK+ KDL    C PN VT+ IL++    +      L+  + ++E  V P+V  
Sbjct: 40  SGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYI 99

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           + +LI      G+ + A K    M E   +KP    Y  V+  L ++G L+K  EL+E+M
Sbjct: 100 FNVLIHGLFKDGNPDQAVKLFENM-ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEM 158

Query: 525 VDRGFTARP 533
           + +G  + P
Sbjct: 159 IRKGGKSAP 167


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 206/470 (43%), Gaps = 55/470 (11%)

Query: 64  HSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVR 123
           +SL+  H + +  P   +   LNP    P         S+A  +  S V H + +   V 
Sbjct: 7   YSLLLKHRKPSSLPLVLATRPLNP----PP--------SSASLLHESHVAHALRREPNV- 53

Query: 124 HGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITV 183
                L  L  F ++T    F H+P  YH MI   G+  + D   + +  MK   +  + 
Sbjct: 54  -----LYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQ 108

Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
           D+F  ++  Y  +GL   A+  F R++E+GC P    ++ ++  L               
Sbjct: 109 DSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDAL------------LGE 156

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
             +KF     VY N                    M+  G++PNV+TY++++ ALC+ G++
Sbjct: 157 SGNKFHMIGAVYEN--------------------MRGEGMEPNVFTYNVLLKALCKNGKL 196

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  +  EM + GC P+ +++  ++    +  R E+  +V    +R G E      N L
Sbjct: 197 DGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREV---ARRFGAEGVVSVCNAL 253

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C++G++ +   +++ MV  G +PN  +++ +   +S +G+V  A  + GKM    C
Sbjct: 254 ICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGC 313

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN  T++ LM+ +         + L + M    V PNV  Y  L+   C  G+   A  
Sbjct: 314 RPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVD 373

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
               M ++   +P  + Y  ++    +AG LQ   E+  KMV+ G   RP
Sbjct: 374 VCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCG--VRP 421



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 176/365 (48%), Gaps = 2/365 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            +  +D M    V+  V ++S ++      G    A+    +M   GC P+   FS ++ 
Sbjct: 266 VFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMK 325

Query: 227 ILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREM-KMAGIQ 284
                 R  E    +  +  +   P+V+VY  L+ G C +GN++EA  V   M K    +
Sbjct: 326 GYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCR 385

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PNV TYS ++    + G +  A +V+ +M+  G  PN + + +++ V  K S  ++  ++
Sbjct: 386 PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRL 445

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            + M   GC    +T+N  I   C  G++  A++V++ M R GC P+  T+N +   +  
Sbjct: 446 IDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFS 505

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           + ++  A  +  ++++ K E N VTYN +M  F++    + VL++   M  N V+P+  T
Sbjct: 506 VNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAIT 565

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
             ++I  Y  +G    A +++  +   K L P    +  +L  +  +  +++    + KM
Sbjct: 566 VNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKM 625

Query: 525 VDRGF 529
           +++G 
Sbjct: 626 LNKGI 630



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 37/255 (14%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V T+S LV  +V+AG    A   +N+M   G  P+ + ++ ++ +LC+     +A    D
Sbjct: 388 VTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLID 447

Query: 243 SLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
           ++  D   P V+ +   ++G C  G +  A RV  +M+  G  P+  TY+ ++D L    
Sbjct: 448 NMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVN 507

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           ++  A ++  E+ E   E N +T+N +M       + E VLQV  +M   G + D IT N
Sbjct: 508 ELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVN 567

Query: 362 FLIDCHCKDGK------------------------------------LEDAIKVLNSMVR 385
            +I  + K GK                                    +E+AI  LN M+ 
Sbjct: 568 VVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLN 627

Query: 386 KGCNPNASTFNMIFR 400
           KG  PN +T++++ R
Sbjct: 628 KGIFPNIATWDVLVR 642



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 8/251 (3%)

Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
            RP  V    +Y  M+++  K   FD A+  ID M +     TV TF+  ++     G  
Sbjct: 419 VRPNVV----VYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRV 474

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNL 258
             A+   ++M+ YGC PD   ++ ++  L       EA      L++ K E +++ Y  +
Sbjct: 475 LWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTV 534

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+   G      +V   M + G++P+  T ++VI A  + G++ R    F + +  G 
Sbjct: 535 MYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKV-RTAIQFLDRITAGK 593

Query: 319 E--PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           E  P+ I   +L+     +   E+ +   N+M   G   +  T++ L+    K       
Sbjct: 594 ELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGP 653

Query: 377 IKVLNSMVRKG 387
           I++L+ ++ KG
Sbjct: 654 IRILDDILGKG 664


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 188/400 (47%), Gaps = 4/400 (1%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           L FF W   +  + H P +Y+ M+ +  K +    A   + LMK R +  T + F  ++ 
Sbjct: 194 LKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMV 253

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEP 250
            Y RAG   +A+     M+  G  P+ +  +  I +  R  R  +A  F + ++     P
Sbjct: 254 SYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVP 313

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V+ Y  ++RG+C    + EA  +  +M   G  P+  +Y  ++  LC+  +I    D+ 
Sbjct: 314 NVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 373

Query: 311 AEML-EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
            +M  E G   + +T+N L+ +  K    ++ L      +  G   D + Y+ ++   CK
Sbjct: 374 KKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCK 433

Query: 370 DGKLEDAIKVLNSMVRKG-CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           +G++ +A  ++N M+ KG C P+  T+  +     +LG+V+ A ++   M     +PNTV
Sbjct: 434 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTV 493

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
           +Y  L+     +  +    ++    EE    PN  TY +L+      G  + A   +REM
Sbjct: 494 SYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREM 553

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  K   PG     ++LQ L R G+  +  + +E+ +++G
Sbjct: 554 V-LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 592



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 166/344 (48%), Gaps = 7/344 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+    +   A EA+      EE G   DK+ +S ++  LC++ R SEA+   + +
Sbjct: 388 TYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEM 447

Query: 245 KDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
             K    PDV+ YT +V G+CR G + +A+++ + M   G +PN  +Y+ +++ LCR G+
Sbjct: 448 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGK 507

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
              A ++     E    PNSIT++ LM    K  +  +   V  +M   G     +  N 
Sbjct: 508 SLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINL 567

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+   C+DG+  +A K +   + KGC  N   F  +     +  +++ A  +   M  + 
Sbjct: 568 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 627

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
              +  TY  L+             +L K+M    ++P   TYR +I  YC M   ++  
Sbjct: 628 KHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLV 687

Query: 483 KYIREMI-EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
             + +MI  +KC     ++Y  V+++L   G+L++ ++L+ K++
Sbjct: 688 AILEKMILRQKC----KTIYNQVIEKLCGLGKLEEADKLLGKVL 727



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 1/284 (0%)

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           ++  D +VY +++    +      A RV   MK  GI      +  V+ +  R GQ+  A
Sbjct: 205 RYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDA 264

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             V   M   G EPN +  N  + V V+A+R EK L+   +M+ +G   + +TYN +I  
Sbjct: 265 LKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRG 324

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEP 425
           +C   ++E+AI++L+ M  KGC P+  ++  I   + K   +     +  KM K+     
Sbjct: 325 YCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVR 384

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + VTYN L+ M       D  L   K+ EE     +   Y  ++   C  G  + A   I
Sbjct: 385 DQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLI 444

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            EM+ +    P    Y  V+    R G++ K ++L++ M   G+
Sbjct: 445 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGY 488



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 112/224 (50%), Gaps = 5/224 (2%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           T+S+L+    + G  +EA      M   G  P  +  ++++  LCR  R  EA+ F +  
Sbjct: 529 TYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 588

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L      +V+ +T ++ G+C+   +  A  V  +M +     +V+TY+ ++DAL + G+I
Sbjct: 589 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRI 648

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM-KRLGCEADTITYNF 362
             A ++  +ML  G +P  +T+  ++  + +  + + ++ +  +M  R  C+     YN 
Sbjct: 649 AEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKT---IYNQ 705

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
           +I+  C  GKLE+A K+L  ++R     +A T   +     K+G
Sbjct: 706 VIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIG 749


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 195/447 (43%), Gaps = 66/447 (14%)

Query: 147 SPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP+ Y  + +I L       D A    D M  +  E    +F ILVR Y RAG  ++ + 
Sbjct: 53  SPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLE 112

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               M   G +P+K+ ++ +IS  C++ +  +A+   D + KD   PDV+ +   +   C
Sbjct: 113 LLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALC 172

Query: 264 RAGNISEAERVFREMKMAGI----QPNVYTYSIVIDALC--------------------- 298
            +G + EA R+FR+M++  +    QPN+ TY++++   C                     
Sbjct: 173 SSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENL 232

Query: 299 --------------RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
                         R G++  A  V  EM+++G EPN  ++N +M    K         +
Sbjct: 233 MNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARML 292

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
              M   G   DT+TY  L+  +C  GK+ +A  VL  M+R GC+PN  T N++   + K
Sbjct: 293 MRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWK 352

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM----------- 453
            G ++ A  +  KM +     +TVT NI++     +   D  +++   M           
Sbjct: 353 EGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNL 412

Query: 454 ------------EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
                          +  P++ +Y  +I+  C  G    A K   EM+  K L+P S++Y
Sbjct: 413 GNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMM-GKNLQPDSAIY 471

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRG 528
           ++ +    + G++     +++ M  +G
Sbjct: 472 DVFIHSFCKEGKISSAFRVLKDMEKKG 498



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 178/373 (47%), Gaps = 31/373 (8%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+++++  + + G+  EA   F +M+      ++ +++I +  L R  +  EAQ     +
Sbjct: 202 TYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEM 261

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            D   EP+V  Y  ++ G C+ G + +A  + R M  +G+ P+  TY+ ++   C  G++
Sbjct: 262 VDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKV 321

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A++V  EM+  GC PN+ T N L+    K  R  +  ++  +M   G   DT+T N +
Sbjct: 322 SEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIV 381

Query: 364 IDCHCKDGKLEDAIKVLNSM-----------------------VRKGCNPNASTFNMIFR 400
           ID  C +GKL+ AI+++N M                        RK C P+  +++ I  
Sbjct: 382 IDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIIS 441

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + K G V  A + + +M     +P++  Y++ +  F          ++ K+ME+     
Sbjct: 442 GLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNK 501

Query: 461 NVNTYRILITMYCGMGHWNN---AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
            + TY  LI    G+G  N     Y  I EM  E+ + P  S+Y  VL  L   G+++  
Sbjct: 502 TLQTYNSLIM---GLGSKNQIFEIYGLIDEM-RERGVSPDVSIYNNVLSSLCEGGRVKDA 557

Query: 518 EELVEKMVDRGFT 530
             ++++M+ +G +
Sbjct: 558 PSVLDEMLQKGIS 570



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 171/373 (45%), Gaps = 78/373 (20%)

Query: 235 SEAQSFFDSLKDKFE---PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
            +A S F SL+ +F    P + +Y  L+R   + G +     + ++M  +G+ P  YT++
Sbjct: 1   GKAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFN 60

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           ++I  LC  G +  A ++F +M E GCEPN  +F  L+R + +A  T K L++  +M+RL
Sbjct: 61  VLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRL 120

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G   + + YN LI   CK+GK +DA K+++ M + G +P+  TFN     +   G V  A
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEA 180

Query: 412 HRMYGKMKDLKC----EPNTVTYNILMQMFAT----SKSTDMVLKLK------------- 450
            R++  M+  +     +PN +TYN+++  F       ++  +  K+K             
Sbjct: 181 SRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNI 240

Query: 451 ------------------KEMEENEVEPNVNTYRI------------------------- 467
                             KEM +  +EPNV +Y I                         
Sbjct: 241 WLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSG 300

Query: 468 ----------LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
                     L+  YC  G  + A   +REM+ + C  P +    ++L  L + G++ + 
Sbjct: 301 VLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGC-SPNNYTCNILLYSLWKEGRISEA 359

Query: 518 EELVEKMVDRGFT 530
           EEL++KM ++G+ 
Sbjct: 360 EELLQKMNEKGYV 372



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 185/396 (46%), Gaps = 8/396 (2%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFD-LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           PE   S  LY+ ++    K  + D ++W   D++ S  V     TF++L+     +G   
Sbjct: 15  PENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVAS-GVSPETYTFNVLIGLLCDSGCLD 73

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLV 259
           +A   F++M E GC P++ +F I++   CR    S+       ++   F P+ +VY  L+
Sbjct: 74  DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLI 133

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML---EV 316
             +C+ G   +AE++  EM+  G+ P+V T++  I ALC  G++  A  +F +M     +
Sbjct: 134 SSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVL 193

Query: 317 GC-EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
           G  +PN IT+N ++    K    E+   ++ +MK      +  +YN  +    + GKL +
Sbjct: 194 GLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLE 253

Query: 376 AIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           A  VL  MV  G  PN  ++N++   + K G +  A  +   M      P+TVTY  L+ 
Sbjct: 254 AQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLH 313

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            +  +        + +EM  +   PN  T  IL+      G  + A + +++M  EK   
Sbjct: 314 GYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM-NEKGYV 372

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
             +    +V+  L   G+L K  E+V  M   G  A
Sbjct: 373 IDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAA 408



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/478 (22%), Positives = 186/478 (38%), Gaps = 98/478 (20%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ M+    K    + A    + MK     +  ++++I +   VR G   EA      M 
Sbjct: 203 YNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMV 262

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+  +++IV+  LC+     +A+     +      PD + YT L+ G+C  G +S
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVS 322

Query: 270 EAERVFREMKMAGIQPNVYT-----YS------------------------------IVI 294
           EA  V REM   G  PN YT     YS                              IVI
Sbjct: 323 EANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVI 382

Query: 295 DALCRCGQITRAHDVFAEMLEVG-----------------------CEPNSITFNNLMRV 331
           D LC  G++ +A ++   M   G                       C P+ I+++ ++  
Sbjct: 383 DGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISG 442

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             KA R  +  + + +M     + D+  Y+  I   CK+GK+  A +VL  M +KGCN  
Sbjct: 443 LCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKT 502

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYG---KMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             T+N +   I  LG  N    +YG   +M++    P+   YN ++              
Sbjct: 503 LQTYNSL---IMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPS 559

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGM-----------------GHWNNAY--------- 482
           +  EM +  + PN++++ ILI  +C                   GH    Y         
Sbjct: 560 VLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLV 619

Query: 483 -------KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
                  K + E   ++    G+ +Y+ ++  L +  +L     ++ K++D+G+   P
Sbjct: 620 GGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDP 677



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 171/371 (46%), Gaps = 36/371 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T +IL+    + G  +EA     +M E G   D +  +IVI  LC   +  +A    + +
Sbjct: 342 TCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGM 401

Query: 245 ------------------------KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
                                   + K  PD+I Y+ ++ G C+AG + EA++ F EM  
Sbjct: 402 WTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMG 461

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
             +QP+   Y + I + C+ G+I+ A  V  +M + GC     T+N+L+      ++  +
Sbjct: 462 KNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFE 521

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
           +  + ++M+  G   D   YN ++   C+ G+++DA  VL+ M++KG +PN S+F+++ +
Sbjct: 522 IYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIK 581

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
              K  D +    ++    ++ C      Y++             V+K  KE+ E  ++ 
Sbjct: 582 AFCKACDFSAVDEIFEIALNV-CGHKEALYSLTFNELLVGGE---VVK-AKELFETALDR 636

Query: 461 NVNT----YRILITMYCGMGHWNNAYKYIREMIEEK-CLKPGSSVYEMVLQQLRRAGQLQ 515
           + +     Y+ LI   C     ++A   + ++I++     P S  +  V+  L + G   
Sbjct: 637 SFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPAS--FMPVIDGLGKRGNKH 694

Query: 516 KHEELVEKMVD 526
           + +EL EKM++
Sbjct: 695 EADELAEKMME 705



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 12/284 (4%)

Query: 148 PDL--YHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           PDL  Y  +I+ L    R  +    FI++M  +N++     + + +  + + G  + A  
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMM-GKNLQPDSAIYDVFIHSFCKEGKISSAFR 489

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               ME+ GC      ++ +I  L  K +  E     D ++++   PDV +Y N++   C
Sbjct: 490 VLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLC 549

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN-- 321
             G + +A  V  EM   GI PN+ ++SI+I A C+    +   ++F   L V       
Sbjct: 550 EGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEAL 609

Query: 322 -SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
            S+TFN L+          K  +++        +     Y  LID  CKD KL+DA  +L
Sbjct: 610 YSLTFNELLV----GGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGIL 665

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           + ++ KG   + ++F  +   + K G+ + A  +  KM ++  E
Sbjct: 666 HKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASE 709


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 188/381 (49%), Gaps = 2/381 (0%)

Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           V S   Y  ++   GK R  +     +  M++  V+  V +++I +R   +A    EA  
Sbjct: 317 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 376

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWC 263
              +ME  GC PD I  +++I +LC   R S+A+  F  +K   + PD + Y  L+  + 
Sbjct: 377 ILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFG 436

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G+      ++  MK  G   NV  Y+ VIDALC+ G++  A ++F EM + G  P   
Sbjct: 437 DNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQY 496

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           ++N+L+   +KA R    L+++  M   G + +  T+   I+ + K G+   AI+    M
Sbjct: 497 SYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELM 556

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG  P+    N +   ++K G +  A R++ ++K +   P+T+TY ++++  + +   
Sbjct: 557 KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF 616

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
           D  +K+  +M EN   P+V     LI      G  + A++   ++ +E  L+P    Y  
Sbjct: 617 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL-KEMNLEPTDGTYNT 675

Query: 504 VLQQLRRAGQLQKHEELVEKM 524
           +L  L R G++++   L+E+M
Sbjct: 676 LLAGLGREGKVKEVMHLLEEM 696



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 37/394 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y   I + G+ ++FD A+  +  M++   +  V T ++L++    AG  ++A   F +M+
Sbjct: 358 YTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMK 417

Query: 211 EYGCAPDKI-----------------------------------AFSIVISILCRKRRAS 235
           +    PD++                                   A++ VI  LC+  R  
Sbjct: 418 KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVF 477

Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
           EA   FD +K K   P+   Y +L+ G+ +A    +A  +F+ M + G +PN YT+ + I
Sbjct: 478 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 537

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +   + G+  +A   +  M   G  P+ +  N ++    K+ R     +V++++K +G  
Sbjct: 538 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 597

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            DTITY  +I C  K  K ++A+K+   M+   C P+    N +   + K G  + A R+
Sbjct: 598 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 657

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + ++K++  EP   TYN L+           V+ L +EM  +   PN+ TY  ++   C 
Sbjct: 658 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 717

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
            G  N+A   +  M  + C+ P  S Y  V+  L
Sbjct: 718 NGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGL 750



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 150/329 (45%), Gaps = 1/329 (0%)

Query: 167  AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
            A   +   KS  V +    ++ L+   V   L   A   F  M+E GC PD+  +++++ 
Sbjct: 864  AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 923

Query: 227  ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             + +  R  E     + +  K +E   + Y  ++ G  ++  + +A  ++  +   G  P
Sbjct: 924  AMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 983

Query: 286  NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
               TY  ++D L + G+I  A ++F EMLE GC+ N   +N L+  H  A  TEKV  ++
Sbjct: 984  TPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLF 1043

Query: 346  NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
              M   G   D  +Y  +ID  CK G+L D +     ++  G  P+  T+N++   + K 
Sbjct: 1044 QDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKS 1103

Query: 406  GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
              +  A  ++ +M+     PN  TYN L+     +       K+ +E+     +PNV TY
Sbjct: 1104 KRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1163

Query: 466  RILITMYCGMGHWNNAYKYIREMIEEKCL 494
              LI  Y   G  ++AY     MI   CL
Sbjct: 1164 NALIRGYSVSGSTDSAYAAYGRMIVGGCL 1192



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 195/451 (43%), Gaps = 72/451 (15%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ ++   G+  +     H ++ M   N    + T++ ++    + G   +A+     M 
Sbjct: 673  YNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT 732

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 270
              GC PD  +++ VI  L ++ R +EA S F  +K    PD      ++  + + G + E
Sbjct: 733  TKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKE 792

Query: 271  AERVFRE---------------------MKMAGIQPNVYTYSIV---------------I 294
            A  + ++                     +K AGI+ ++    I+               I
Sbjct: 793  ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLI 852

Query: 295  DALCR------------------------------CGQITR-----AHDVFAEMLEVGCE 319
              LC+                              CG +       A  +FAEM E+GC 
Sbjct: 853  KHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 912

Query: 320  PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
            P+  T+N L+    K+ R E++L+V  +M R G E+  +TYN +I    K  +LE AI +
Sbjct: 913  PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 972

Query: 380  LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
              +++ +G +P   T+  +   + K G +  A  ++ +M +  C+ N   YNIL+     
Sbjct: 973  YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 1032

Query: 440  SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            + +T+ V  L ++M +  + P++ +Y I+I   C  G  N+   Y R+++E   L+P   
Sbjct: 1033 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG-LEPDLI 1091

Query: 500  VYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
             Y +++  L ++ +L++   L  +M  +G  
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1122



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 181/390 (46%), Gaps = 10/390 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLA-GKVRQFDLAWHFIDLMKSRNVEITVDTFS- 187
           + L  F     +P    +    + M+ L  G  R  D+A  F D+M+ + V+  V TF+ 
Sbjct: 197 EALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVF-DVMQRQIVKANVGTFAA 255

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
           I     V  GL +  V A   M+E G   +   ++ ++  L +     EA   +  +  D
Sbjct: 256 IFGGLGVEGGLRSAPV-ALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVD 314

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P V  Y+ L+  + +  ++     + REM+  G++PNVY+Y+I I  L +  +   A
Sbjct: 315 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 374

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + + A+M   GC+P+ IT   L++V   A R      V+ +MK+   + D +TY  L+D 
Sbjct: 375 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 434

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
              +G  +  +++ N+M   G N N   +  +   + ++G V  A  M+ +MK     P 
Sbjct: 435 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 494

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             +YN L+  F  +      L+L K M+ +  +PN  T+ + I  Y   G    + K I+
Sbjct: 495 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY---GKSGESIKAIQ 551

Query: 487 --EMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
             E+++ K + P       VL  L ++G+L
Sbjct: 552 RYELMKSKGIVPDVVAGNAVLFGLAKSGRL 581



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 1/272 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   K  +F  A      M     +    T  + +  Y ++G + +A+  +  M+
Sbjct: 498 YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 557

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
             G  PD +A + V+  L +  R   A+  F  LK     PD I YT +++   +A    
Sbjct: 558 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 617

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA ++F +M      P+V   + +ID L + G+   A  +F ++ E+  EP   T+N L+
Sbjct: 618 EAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 677

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +  + ++V+ +  +M       + ITYN ++DC CK+G + DA+ +L SM  KGC 
Sbjct: 678 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 737

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
           P+ S++N +   + K    N A  ++ +MK +
Sbjct: 738 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 769



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 14/290 (4%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ +I+   K R+ + A      + S+    T  T+  L+   ++AG   +A + FN M 
Sbjct: 953  YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 1012

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQS----FFDSLKDKFEPDVIVYTNLVRGWCRAG 266
            EYGC  +   ++I+++     R A   +     F D +     PD+  YT ++   C+AG
Sbjct: 1013 EYGCKANCTIYNILLN---GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1069

Query: 267  NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
             +++    FR++   G++P++ TY+++ID L +  ++  A  +F EM + G  PN  T+N
Sbjct: 1070 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1129

Query: 327  NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +L+    KA +  +  ++Y ++   G + +  TYN LI  +   G  + A      M+  
Sbjct: 1130 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1189

Query: 387  GCNPNASTFNMIFRCISKLGDVN---GAHRMYGKMKDLKCEPNTVTYNIL 433
            GC PN+ST +        +G V     +HR Y   K    EP T  +  L
Sbjct: 1190 GCLPNSSTDSSNCSSPEAVGTVRKQITSHRSYHNAK----EPTTKAWRWL 1235



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 1/211 (0%)

Query: 144  FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
            F  +P  Y  +++   K  + + A +  + M     +     ++IL+  +  AG   +  
Sbjct: 981  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 1040

Query: 204  HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGW 262
            H F  M + G  PD  +++I+I  LC+  + ++  ++F  L +   EPD+I Y  L+ G 
Sbjct: 1041 HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1100

Query: 263  CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
             ++  + EA  +F EM+  GI PN+YTY+ +I  L + G+   A  ++ E+L  G +PN 
Sbjct: 1101 GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNV 1160

Query: 323  ITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
             T+N L+R +  +  T+     Y +M   GC
Sbjct: 1161 FTYNALIRGYSVSGSTDSAYAAYGRMIVGGC 1191



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/432 (22%), Positives = 184/432 (42%), Gaps = 10/432 (2%)

Query: 104  AHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY--HEMINLAGKV 161
            A  +SP T+ + +   C  +       V  F++ +    E    PD+   + +I+   K 
Sbjct: 593  AMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI----ENNCVPDVLAVNSLIDTLYKA 648

Query: 162  RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
             + D AW     +K  N+E T  T++ L+    R G   E +H    M      P+ I +
Sbjct: 649  GRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 708

Query: 222  SIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
            + ++  LC+    ++A     S+  K   PD+  Y  ++ G  +    +EA  +F +MK 
Sbjct: 709  NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 768

Query: 281  AGIQPNVYTYSIVIDALCRCGQITRA-HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
              I P+  T   ++ +  + G +  A H +    L+ G + +  + ++LM   +K +  E
Sbjct: 769  VLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 827

Query: 340  KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
            K ++    +   G   D      LI   CK  K  +A +++      G +     +N + 
Sbjct: 828  KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLI 887

Query: 400  RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
              +     ++ A  ++ +MK+L C P+  TYN+L+     S   + +LK+++EM     E
Sbjct: 888  CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 947

Query: 460  PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
                TY  +I+          A      ++ +    P    Y  +L  L +AG+++  E 
Sbjct: 948  STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAEN 1006

Query: 520  LVEKMVDRGFTA 531
            L  +M++ G  A
Sbjct: 1007 LFNEMLEYGCKA 1018


>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Glycine max]
          Length = 576

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 195/402 (48%), Gaps = 8/402 (1%)

Query: 131 VLSFFNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFS 187
           ++S   W+  R  F   PD+  Y+ +I   G+   +  A   ++ L+++R +  T DT++
Sbjct: 138 IISICRWILLRSSF--KPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIP-TEDTYA 194

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
           +L++ Y  +GL  +A   F  M  YG     + ++  I+ L +   + +A+  F  +K D
Sbjct: 195 LLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKD 254

Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
             +P    YT L+  + +AG    A ++F EM     +PN+ TY+ +++A  R G   +A
Sbjct: 255 ACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKA 314

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
            +VF +M E G EP+   +N LM  + +A       ++++ M+ +GCE D  +YN L+D 
Sbjct: 315 EEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDA 374

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           + K G  +DA  V   M R G  P   +  ++    SK+G VN    +  +M     + +
Sbjct: 375 YGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLD 434

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
           T   N ++ ++        + ++ + ME+     +++TY ILI  Y G   +    + + 
Sbjct: 435 TYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRY-GQAGFIERMEDLF 493

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +++  K LKP    +   +    +     K  E+ E+M+D G
Sbjct: 494 QLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDG 535



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 159/317 (50%), Gaps = 2/317 (0%)

Query: 216 PDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERV 274
           PD I ++++I    +K    EA+S +   L+ +  P    Y  L++ +C +G + +AE V
Sbjct: 153 PDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAV 212

Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
           F EM+  G+  +   Y+  I+ L + G   +A ++F  M +  C+P + T+  L+ ++ K
Sbjct: 213 FAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGK 272

Query: 335 ASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
           A ++   L+++++M    C+ +  TY  L++   ++G  E A +V   M   G  P+   
Sbjct: 273 AGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYA 332

Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
           +N +    S+ G   GA  ++  M+ + CEP+  +YNIL+  +  +   D    + K+M+
Sbjct: 333 YNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMK 392

Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
              + P + ++ +L++ Y  MG  N   + + +M +   LK  + V   +L    R GQ 
Sbjct: 393 RVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSG-LKLDTYVLNSMLNLYGRLGQF 451

Query: 515 QKHEELVEKMVDRGFTA 531
            K EE++  M    + A
Sbjct: 452 GKMEEVLRVMEKGSYVA 468



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 154/325 (47%), Gaps = 1/325 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S  +Y+  IN   K    D A      MK    + T +T+++L+  Y +AG +  A+  F
Sbjct: 224 SAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLF 283

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
           + M  + C P+   ++ +++   R+    +A+  F+ +++   EPDV  Y  L+  + RA
Sbjct: 284 HEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRA 343

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G    A  +F  M+  G +P+  +Y+I++DA  + G    A  VF +M  VG  P   + 
Sbjct: 344 GYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSH 403

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
             L+  + K     K  ++ NQM + G + DT   N +++ + + G+     +VL  M +
Sbjct: 404 MVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEK 463

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
                + ST+N++     + G +     ++  +     +P+ VT+   +  ++  K    
Sbjct: 464 GSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLK 523

Query: 446 VLKLKKEMEENEVEPNVNTYRILIT 470
            L++ +EM ++   P+  T ++L+ 
Sbjct: 524 CLEIFEEMIDDGCYPDGGTAKVLLA 548



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 36/293 (12%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           + + Y  +INL GK  +  +A      M S + +  + T++ LV  + R GL  +A   F
Sbjct: 259 TTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVF 318

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
            +M+E G  PD  A++ ++    R      A   F  ++    EPD   Y  LV  + +A
Sbjct: 319 EQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKA 378

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G   +AE VF++MK  GI P + ++ +++ A  + G + +  ++  +M + G + ++   
Sbjct: 379 GFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVL 438

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG---KLEDAIKVLNS 382
           N+++ ++ +  +  K+ +V   M++    AD  TYN LI+ + + G   ++ED  ++L S
Sbjct: 439 NSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPS 498

Query: 383 --------------------------------MVRKGCNPNASTFNMIFRCIS 403
                                           M+  GC P+  T  ++    S
Sbjct: 499 KGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACS 551



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 36/269 (13%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   +    + A    + M+   +E  V  ++ L+  Y RAG    A   F+ M+
Sbjct: 298 YTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQ 357

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK------------------------- 245
             GC PD+ +++I++    +     +A++ F  +K                         
Sbjct: 358 HMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVN 417

Query: 246 -----------DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
                         + D  V  +++  + R G   + E V R M+      ++ TY+I+I
Sbjct: 418 KCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILI 477

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +   + G I R  D+F  +   G +P+ +T+ + +  + K     K L+++ +M   GC 
Sbjct: 478 NRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCY 537

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            D  T   L+     + + E    V+ +M
Sbjct: 538 PDGGTAKVLLAACSNEDQTEQVTTVIRTM 566



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 1/201 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +++  GK    D A      MK   +  T+ +  +L+  Y + G   +     N+M 
Sbjct: 368 YNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMC 427

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
           + G   D    + ++++  R  +  + +     + K  +  D+  Y  L+  + +AG I 
Sbjct: 428 KSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIE 487

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
             E +F+ +   G++P+V T++  I A  +     +  ++F EM++ GC P+  T   L+
Sbjct: 488 RMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLL 547

Query: 330 RVHVKASRTEKVLQVYNQMKR 350
                  +TE+V  V   M +
Sbjct: 548 AACSNEDQTEQVTTVIRTMHK 568


>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Brachypodium distachyon]
          Length = 548

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 182/399 (45%), Gaps = 9/399 (2%)

Query: 134 FFNWVTARPEFVHSPDLYHEMIN-LAG---KVRQFDLAWHFIDLMKS-RNVEITVDTFSI 188
           FF W + +  + H    Y+E+I+ L+G   K RQF +    +D MK  R   + V+    
Sbjct: 125 FFAWASQQDNYEHDQAAYNEVIDTLSGTRYKARQFGVLCDVLDHMKRHRTRSVPVEDLLA 184

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++R Y    L      A  R       P+  A +I++   C+     EA++ F  +K K 
Sbjct: 185 ILRAYTEKHLTNLRKLAKKRRVRMRTPPETDALNILLDAFCKCGMVREAETVFGRVKRKL 244

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           + +   Y  L  GWCRA +  +A +V  EM +    P  +TY   ID+ C  G ++ A +
Sbjct: 245 QGNAETYNILFFGWCRARDPKKAMKVLEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKE 304

Query: 309 VFAEMLEVGCE---PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           +F  M   G     P +  ++ ++   VKA R +   ++ + M +LGC  D  T+  LI+
Sbjct: 305 LFEFMRTEGSSISSPTAKAYSVMIVALVKADRMDDCFELISDMIKLGCMPDVSTFKDLIE 364

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C   K++ A  VL  M + G  P+  T+N     +  L   + A ++  +M +  CEP
Sbjct: 365 GMCLVDKIDTAYFVLEEMGKAGFPPDIVTYNCFLEVLCNLQKADDALKLCERMIEAHCEP 424

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           +  TYN+LM MF   +     L +  EM++      V+TY I+I      G   +A   +
Sbjct: 425 SVHTYNMLMVMFFQMREPHRALDIWLEMDKRGCRRAVDTYEIMIDGLFDCGRTEDATNLL 484

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            E+I    +K     ++ ++ QL   G L     L E M
Sbjct: 485 DEVINHD-MKLSYKKFDAIMLQLSAVGNLGAIHRLSEHM 522



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 12/254 (4%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCA---PDKIAFSIVISILCRKRRASEAQSFF 241
           T+   +  +  AGL +EA   F  M   G +   P   A+S++I  L +  R  +     
Sbjct: 285 TYIAAIDSFCSAGLVSEAKELFEFMRTEGSSISSPTAKAYSVMIVALVKADRMDDCFELI 344

Query: 242 -DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
            D +K    PDV  + +L+ G C    I  A  V  EM  AG  P++ TY+  ++ LC  
Sbjct: 345 SDMIKLGCMPDVSTFKDLIEGMCLVDKIDTAYFVLEEMGKAGFPPDIVTYNCFLEVLCNL 404

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
            +   A  +   M+E  CEP+  T+N LM +  +     + L ++ +M + GC     TY
Sbjct: 405 QKADDALKLCERMIEAHCEPSVHTYNMLMVMFFQMREPHRALDIWLEMDKRGCRRAVDTY 464

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
             +ID     G+ EDA  +L+ ++      +   F+ I   +S +G++   HR+   M+ 
Sbjct: 465 EIMIDGLFDCGRTEDATNLLDEVINHDMKLSYKKFDAIMLQLSAVGNLGAIHRLSEHMRK 524

Query: 421 LKCEPNTVTYNILM 434
                    YN+ M
Sbjct: 525 F--------YNVAM 530


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 210/479 (43%), Gaps = 51/479 (10%)

Query: 89  FTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSP 148
           F + + S G    + A+SI    V     K+  V     LL+ +    WV +   F    
Sbjct: 266 FFLEAKSRGVKLDAAAYSI----VIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSV- 320

Query: 149 DLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
                   +   V+Q ++  A    D M S  V++ V   + LV+ Y +      A+  F
Sbjct: 321 --------IGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFF 372

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW--- 262
           ++M E G +P+++ ++++I   C+    ++A   +  +K+K   P V +  +L+RG+   
Sbjct: 373 DKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKV 432

Query: 263 -------------------------------CRAGNISEAERVFREMKMAGIQPNVYTYS 291
                                          C+ G +SEA  ++++M   G+ P   +Y+
Sbjct: 433 ESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYN 492

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I   CR G +  A  VF++ML+ G +PN IT++ LM  + K   TE    V+++M   
Sbjct: 493 SMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDE 552

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
                  TYN  I+  CK G+  +A  +L   V KG  P   T+N I     K G V+ A
Sbjct: 553 NIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSA 612

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              Y +M +    PN +TY  L+  F  + +TD+ LK++ EM    +E ++  Y  LI  
Sbjct: 613 LTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDG 672

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           +C       A     E+++   L P S +Y  ++   R    ++    L ++M+  G +
Sbjct: 673 FCKKQDIETASWLFSELLDGG-LSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGIS 730



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 175/382 (45%), Gaps = 37/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T++ L+    + G  +EA   + +M + G AP K++++ +I   CR+     A S F  +
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            D   +P+VI Y+ L+ G+ + G+   A  VF  M    I P+ +TY+I I+ LC+ G+ 
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
           + A D+  + +E G  P  +T+N++M   +K       L  Y +M   G   + ITY  L
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+  CK+   + A+K+ N M  KG   + + +  +     K  D+  A  ++ ++ D   
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694

Query: 424 EPNTVTYNILM-----------------QMFATSKSTDM------------------VLK 448
            PN+V YN L+                 +M     S D+                   L 
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L  EM    + P++  Y +LI   CG G   NA K + EM E   + P   +Y  ++   
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEM-ERDSITPNVPIYNALIAGH 813

Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
            +AG LQ+   L  +M+D+G T
Sbjct: 814 FKAGNLQEAFRLHNEMLDKGLT 835



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 195/440 (44%), Gaps = 23/440 (5%)

Query: 89  FTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSP 148
           F + SL  GF ++ +    S      V   +C + +   +    S  +W+    +   + 
Sbjct: 420 FIVNSLIRGFLKVESREEASKLFDEAV---ACDIAN---IFTYNSLLSWLCKEGKMSEAT 473

Query: 149 DLYHEMIN-------------LAGKVRQ--FDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
            L+ +M++             + G  RQ   D+A      M    ++  V T+SIL+  Y
Sbjct: 474 TLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533

Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDV 252
            + G    A + F+RM +    P    ++I I+ LC+  R SEAQ       +K F P  
Sbjct: 534 FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVC 593

Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           + Y +++ G+ + G++S A   +REM  +G+ PNV TY+ +I+  C+      A  +  E
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
           M   G E +   +  L+    K    E    +++++   G   +++ YN LI  +     
Sbjct: 654 MRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNN 713

Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           +E A+ +   M+ +G + +  T+  +   + K G +  A  +Y +M      P+ + Y +
Sbjct: 714 MEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTV 773

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           L+         +   K+  EME + + PNV  Y  LI  +   G+   A++   EM+ +K
Sbjct: 774 LINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEML-DK 832

Query: 493 CLKPGSSVYEMVLQQLRRAG 512
            L P  + Y++++    + G
Sbjct: 833 GLTPNDTTYDILINGKIKGG 852



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 166/365 (45%), Gaps = 3/365 (0%)

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
           L  HFI   K  + +  +  ++ L+  Y++A    +A+  FNR+ E    P     + ++
Sbjct: 157 LVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLL 216

Query: 226 SILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           + L +     EA+  ++ +  K    D      ++R   +  N  EA++ F E K  G++
Sbjct: 217 TALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVK 276

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
            +   YSIVI A C+   +  A  +  +M + G  P+  TF +++   VK     + L++
Sbjct: 277 LDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRL 336

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            ++M   G + + +    L+  +CK  KL  A++  + M   G +PN  T+ ++     K
Sbjct: 337 KDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCK 396

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G++  A+ +Y +MK+    P     N L++ F   +S +   KL  E    ++  N+ T
Sbjct: 397 NGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFT 455

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  L++  C  G  + A    ++M+ +K L P    Y  ++    R G L     +   M
Sbjct: 456 YNSLLSWLCKEGKMSEATTLWQKML-DKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 525 VDRGF 529
           +D G 
Sbjct: 515 LDCGL 519



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 2/173 (1%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           +W F +L+       +V  ++ L+  Y        A++   RM   G + D   ++ +I 
Sbjct: 683 SWLFSELLDGGLSPNSV-IYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLID 741

Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            L ++ R   A   +  +  K   PD+I+YT L+ G C  G +  A+++  EM+   I P
Sbjct: 742 GLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITP 801

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
           NV  Y+ +I    + G +  A  +  EML+ G  PN  T++ L+   +K   +
Sbjct: 802 NVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNS 854


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 179/379 (47%), Gaps = 2/379 (0%)

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
           + +++L  K+ + + AW     M    ++ +V TF+I++    + G   +A      ME 
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISE 270
            G  P+ + ++ ++   C   R   A +   ++K  K EPD   Y +L+ G C+ G + E
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A ++F EM   G++P+   Y+ +ID  C  G +  A     EML+ G  P   T+N+L+ 
Sbjct: 310 ASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIH 369

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
                 RT++   +  +++  G   D ITYN LI+ +C+    + A  + + M+  G  P
Sbjct: 370 ALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP 429

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
              T+  +   +SK   +  A  ++ K+      P+ + +N L+    ++ +     +L 
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELL 489

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           K+M+  +V P+  T+  ++  +C  G    A +   EM + + +KP    +  ++    R
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM-KRRGIKPDHISFNTLISGYSR 548

Query: 511 AGQLQKHEELVEKMVDRGF 529
            G ++    +  +M+D GF
Sbjct: 549 RGDIKDAFRVRNEMLDTGF 567



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 180/396 (45%), Gaps = 37/396 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ MIN+  K  +   A  F+  M++  V+  + T++ +V  Y  +G    A      M+
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI- 268
                PD   +  +IS +C++ R  EA   F+ +  K   P  ++Y  L+ G+C  GN+ 
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343

Query: 269 ----------------------------------SEAERVFREMKMAGIQPNVYTYSIVI 294
                                              EAE + +E++  GI P+  TY+I+I
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +  CRC    +A  +  EML  G +P   T+ +L+ V  K +R ++   ++ ++   G  
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D I +N LID HC +  ++ A ++L  M R    P+  TFN I +   + G V  A  +
Sbjct: 464 PDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +MK    +P+ +++N L+  ++         +++ EM +    P V TY  L+   C 
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
               + A + ++EM+  K + P  + Y  +++ + +
Sbjct: 584 NQEGDLAEELLKEMV-SKGMTPDDTTYFTLIEGIAK 618



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 2/311 (0%)

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           I F  +I   C   RA EA   F ++K+K   P +    +L+  + +      A  ++ E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    I+ +VYT++I+I+ LC+ G++ +A D    M   G +PN +T+N ++  +  + R
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E    +   MKR   E D+ TY  LI   CK G+LE+A K+   MV+KG  P+A  +N 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +       G+++ A     +M      P   TYN L+      + TD    + KE++E  
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + P+  TY ILI  YC   +   A+    EM+    +KP    Y  +L  L +  ++++ 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASG-IKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 518 EELVEKMVDRG 528
           ++L +K+   G
Sbjct: 451 DDLFKKITSEG 461



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 5/299 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  V    +Y+ +I+        D+A  + D M  + +  T+ T++ L+          
Sbjct: 323 RPSAV----IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLV 259
           EA      ++E G +PD I ++I+I+  CR   A +A    D  L    +P    YT+L+
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
               +   + EA+ +F+++   G+ P+   ++ +ID  C    +  A ++  +M  +   
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +TFN +M+ H +  + E+  +++++MKR G + D I++N LI  + + G ++DA +V
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            N M+  G NP   T+N + + + K  + + A  +  +M      P+  TY  L++  A
Sbjct: 559 RNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+     ++ D A   I  ++ + +     T++IL+  Y R   A +A    + M 
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P K  ++ ++ +L +K R  EA   F  +  +   PD I++  L+ G C   N+ 
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVK 483

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  + ++M    + P+  T++ ++   CR G++  A ++F EM   G +P+ I+FN L+
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + +    +   +V N+M   G     +TYN L+   CK+ + + A ++L  MV KG  
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMT 603

Query: 390 PNASTFNMIFRCISKL 405
           P+ +T+  +   I+K+
Sbjct: 604 PDDTTYFTLIEGIAKV 619



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 1/210 (0%)

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +SI F+ L++     +R ++  + +  MK  G      T N L+    K  + E A  + 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M R     +  TFN++   + K G +  A    G M+    +PN VTYN ++  + +S
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +    +   M+  ++EP+  TY  LI+  C  G    A K   EM+ +K L+P + +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMV-QKGLRPSAVI 328

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           Y  ++      G L       ++M+ +G +
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGIS 358


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 179/379 (47%), Gaps = 2/379 (0%)

Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
           + +++L  K+ + + AW     M    ++ +V TF+I++    + G   +A      ME 
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISE 270
            G  P+ + ++ ++   C   R   A +   ++K  K EPD   Y +L+ G C+ G + E
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A ++F EM   G++P+   Y+ +ID  C  G +  A     EML+ G  P   T+N+L+ 
Sbjct: 310 ASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIH 369

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
                 RT++   +  +++  G   D ITYN LI+ +C+    + A  + + M+  G  P
Sbjct: 370 ALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP 429

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
              T+  +   +SK   +  A  ++ K+      P+ + +N L+    ++ +     +L 
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELL 489

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           K+M+  +V P+  T+  ++  +C  G    A +   EM + + +KP    +  ++    R
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM-KRRGIKPDHISFNTLISGYSR 548

Query: 511 AGQLQKHEELVEKMVDRGF 529
            G ++    +  +M+D GF
Sbjct: 549 RGDIKDAFRVRNEMLDTGF 567



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 180/396 (45%), Gaps = 37/396 (9%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           ++ MIN+  K  +   A  F+  M++  V+  + T++ +V  Y  +G    A      M+
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI- 268
                PD   +  +IS +C++ R  EA   F+ +  K   P  ++Y  L+ G+C  GN+ 
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343

Query: 269 ----------------------------------SEAERVFREMKMAGIQPNVYTYSIVI 294
                                              EAE + +E++  GI P+  TY+I+I
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
           +  CRC    +A  +  EML  G +P   T+ +L+ V  K +R ++   ++ ++   G  
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463

Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            D I +N LID HC +  ++ A ++L  M R    P+  TFN I +   + G V  A  +
Sbjct: 464 PDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523

Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
           + +MK    +P+ +++N L+  ++         +++ EM +    P V TY  L+   C 
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583

Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
               + A + ++EM+  K + P  + Y  +++ + +
Sbjct: 584 NQEGDLAEELLKEMV-SKGMTPDDTTYFTLIEGIAK 618



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 2/311 (0%)

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           I F  +I   C   RA EA   F ++K+K   P +    +L+  + +      A  ++ E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M    I+ +VYT++I+I+ LC+ G++ +A D    M   G +PN +T+N ++  +  + R
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E    +   MKR   E D+ TY  LI   CK G+LE+A K+   MV+KG  P+A  +N 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +       G+++ A     +M      P   TYN L+      + TD    + KE++E  
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
           + P+  TY ILI  YC   +   A+    EM+    +KP    Y  +L  L +  ++++ 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASG-IKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 518 EELVEKMVDRG 528
           ++L +K+   G
Sbjct: 451 DDLFKKITSEG 461



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 149/299 (49%), Gaps = 5/299 (1%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           RP  V    +Y+ +I+        D+A  + D M  + +  T+ T++ L+          
Sbjct: 323 RPSAV----IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLV 259
           EA      ++E G +PD I ++I+I+  CR   A +A    D  L    +P    YT+L+
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
               +   + EA+ +F+++   G+ P+V  ++ +ID  C    +  A ++  +M  +   
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
           P+ +TFN +M+ H +  + E+  +++++MKR G + D I++N LI  + + G ++DA +V
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
            N M+  G NP   T+N + + + K  + + A  +  +M      P+  TY  L++  A
Sbjct: 559 RNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+     ++ D A   I  ++ + +     T++IL+  Y R   A +A    + M 
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
             G  P K  ++ ++ +L +K R  EA   F  +  +   PDVI++  L+ G C   N+ 
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVK 483

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  + ++M    + P+  T++ ++   CR G++  A ++F EM   G +P+ I+FN L+
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + +    +   +V N+M   G     +TYN L+   CK+ + + A ++L  MV KG  
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMT 603

Query: 390 PNASTFNMIFRCISKL 405
           P+ +T+  +   I+K+
Sbjct: 604 PDDTTYFTLIEGIAKV 619



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 1/210 (0%)

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
           +SI F+ L++     +R ++  + +  MK  G      T N L+    K  + E A  + 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
             M R     +  TFN++   + K G +  A    G M+    +PN VTYN ++  + +S
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              +    +   M+  ++EP+  TY  LI+  C  G    A K   EM+ +K L+P + +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMV-QKGLRPSAVI 328

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           Y  ++      G L       ++M+ +G +
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGIS 358


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 169/352 (48%), Gaps = 3/352 (0%)

Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD  +Y  +I+   K    ++A   +  M S  ++  V  ++ +++    A    +A  
Sbjct: 263 TPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEE 322

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWC 263
               M +  C  D + F+I++   C+           +  L+    PDVI YT ++ G+C
Sbjct: 323 LLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC 382

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G I EA  + + M   G +PN  +Y+IV+  LC   +   A ++ + M++ GC PN +
Sbjct: 383 KEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPV 442

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           TFN ++    K    E+ +++  QM   GC  D I+Y+ +ID   K GK E+A+++LN M
Sbjct: 443 TFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVM 502

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           + KG  PN  T++ +   +++ G ++   +M+  ++D     + V YN ++      + T
Sbjct: 503 INKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRET 562

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
           D+ +     M  N   PN +TY  LI      G    A   + E+   + ++
Sbjct: 563 DLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVR 614



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/440 (21%), Positives = 199/440 (45%), Gaps = 18/440 (4%)

Query: 100 QISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINL 157
           +++ A  + P+   +  V+   CG      +   L+  + +T+R   V  P +YH +I  
Sbjct: 105 RLAAAVPVPPNAYTYFPVVRGLCGRGR---IADALAVLDEMTSR-SCVPIPPMYHVIIES 160

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           A +   +  A   ++ + ++   +     ++++      G   E +    ++  +GC  D
Sbjct: 161 ACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEAD 220

Query: 218 KIAFSIVISILCRKRRASEAQSFFDSLKDKFE-----------PDVIVYTNLVRGWCRAG 266
            ++++ V+  LC  +R  + +   D +    E           PD+ +Y  ++ G C+ G
Sbjct: 221 IVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEG 280

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
           +   A  +   M   G++PNV  Y+ V+  +C   +  +A ++  EM +  C  + +TFN
Sbjct: 281 HHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFN 340

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    +    ++V+++  QM   GC  D ITY  +I+  CK+G +++A+ +L +M   
Sbjct: 341 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSC 400

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           GC PN  ++ ++ + +        A  +  +M    C PN VT+N ++         +  
Sbjct: 401 GCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQA 460

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           ++L K+M  N   P++ +Y  +I      G    A + +  MI  K + P    Y  +  
Sbjct: 461 IELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI-NKGITPNVITYSSMAF 519

Query: 507 QLRRAGQLQKHEELVEKMVD 526
            L R G++ K  ++ + + D
Sbjct: 520 ALAREGRIDKVIQMFDNIQD 539



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 182/386 (47%), Gaps = 13/386 (3%)

Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
            L G+ R  D A   +D M SR+       + +++    R+G  + A+     +   G  
Sbjct: 125 GLCGRGRIAD-ALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGST 183

Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERV 274
            D    ++VI+ +C +    E       L     E D++ Y  +++G C A    + E +
Sbjct: 184 LDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEEL 243

Query: 275 FREM--------KMA--GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
             EM        +MA  G  P++  Y+ +ID +C+ G    A+++ + M   G +PN + 
Sbjct: 244 MDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVC 303

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N +++    A R EK  ++  +M +  C  D +T+N L+D  C++G ++  I++L  M+
Sbjct: 304 YNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 363

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GC P+  T+  +     K G ++ A  +   M    C+PNT++Y I+++   +++   
Sbjct: 364 EHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWV 423

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              +L   M +    PN  T+  +I   C  G    A + +++M+   C  P    Y  V
Sbjct: 424 DAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGC-NPDLISYSTV 482

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFT 530
           +  L +AG+ ++  EL+  M+++G T
Sbjct: 483 IDGLGKAGKTEEALELLNVMINKGIT 508



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 156/323 (48%), Gaps = 2/323 (0%)

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCR 264
            +RM  YG  P+ + ++ V+  +C   R  +A+     +  K  P D + +  LV  +C+
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G +     +  +M   G  P+V TY+ VI+  C+ G I  A  +   M   GC+PN+I+
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTIS 408

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  +++      R     ++ ++M + GC  + +T+N +I+  CK G +E AI++L  M+
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQML 468

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             GCNP+  +++ +   + K G    A  +   M +    PN +TY+ +    A     D
Sbjct: 469 VNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRID 528

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
            V+++   +++  +  +   Y  +I+  C     + A  ++  M+   C+ P  S Y  +
Sbjct: 529 KVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCM-PNESTYTAL 587

Query: 505 LQQLRRAGQLQKHEELVEKMVDR 527
           ++ L   G L + ++L+ ++  R
Sbjct: 588 IKGLASEGLLCEAQDLLSELCSR 610



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 178/394 (45%), Gaps = 22/394 (5%)

Query: 157 LAGKVRQFDLAWHFIDLMKS----RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE- 211
           L+  +R   +A    D +++     N    VD ++ +V  Y R G     V A  R+   
Sbjct: 55  LSALIRSLCVAGRTADAVRALDAAGNAAGVVD-YNAMVAGYCRVG----QVEAARRLAAA 109

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISE 270
               P+   +  V+  LC + R ++A +  D +  +   P   +Y  ++   CR+G  S 
Sbjct: 110 VPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
           A RV   +   G   +    ++VI+A+C  G +    ++  ++   GCE + +++N +++
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229

Query: 331 VHVKASR----------TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
               A R            KV +  +QM + GC  D   Y  +ID  CK+G  E A ++L
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + M   G  PN   +N + + I        A  +  +M    C  + VT+NIL+  F  +
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQN 349

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
              D V++L ++M E+   P+V TY  +I  +C  G  + A   ++ M    C KP +  
Sbjct: 350 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGC-KPNTIS 408

Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
           Y +VL+ L    +    EEL+ +M+ +G    P+
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPV 442


>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
 gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
          Length = 668

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 168/360 (46%), Gaps = 4/360 (1%)

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           DL +SR +E     FS L+  + RA L   A+      +  G  P   A + +IS L   
Sbjct: 218 DLRESR-LEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTA 276

Query: 232 RRASEAQSFFDS--LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
            R +EA++ F    L  + +P    Y  L++G+ R G++  AE+V  EM   G+ P+  T
Sbjct: 277 GRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEAT 336

Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
           YS+++DA  R G+   A  +  EM   G +P+S  F+ ++         +K   V  +M+
Sbjct: 337 YSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQ 396

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             G   D   YN +ID   K   L  A+   N M  +G  P+  T+N +     K G  +
Sbjct: 397 ASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHD 456

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A  ++ +M++  C P T TYNI++ +    +  + V  +  EM+E  + PN+ TY  L+
Sbjct: 457 RAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLV 516

Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            +Y   G +  A   I E ++   LKP  ++Y  ++    + G       +V+ M   G 
Sbjct: 517 DVYGRSGRYKEAIDCI-EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 166/375 (44%), Gaps = 38/375 (10%)

Query: 155 INLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
           +  AG+V + +    F++   +  ++     ++ L++ YVR G    A    + M + G 
Sbjct: 273 LGTAGRVAEAEAL--FLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGV 330

Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAER 273
           APD+  +S+++    R  R   A+     ++ D  +P   V++ ++ G+   G+  +A  
Sbjct: 331 APDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFA 390

Query: 274 VFREMKMAG-----------------------------------IQPNVYTYSIVIDALC 298
           V REM+ +G                                   I+P+V T++ +IDA C
Sbjct: 391 VLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHC 450

Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
           + G+  RA ++F EM E  C P + T+N ++ +  +    E V  + ++MK  G   + I
Sbjct: 451 KGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNII 510

Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
           TY  L+D + + G+ ++AI  + +M   G  P+ + ++ +    ++ G  + A  +   M
Sbjct: 511 TYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAM 570

Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
           K    E + +  N L+  F   +       + + M EN + P+V TY  L+     +  +
Sbjct: 571 KADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQF 630

Query: 479 NNAYKYIREMIEEKC 493
           +       EMI   C
Sbjct: 631 DKVPVIYEEMITSGC 645



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 1/254 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M++  V      +++++  + +      A+ AFN+M E G  PD + ++ +I   C+  R
Sbjct: 395 MQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGR 454

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
              A   F+ +++    P    Y  ++       +    E +  EMK  G+ PN+ TY+ 
Sbjct: 455 HDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTT 514

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           ++D   R G+   A D    M   G +P+   ++ L+  + +    +  L V   MK  G
Sbjct: 515 LVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADG 574

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            E   +  N LI+   +D ++ +A  VL  M   G  P+  T+  + + + ++   +   
Sbjct: 575 LEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVP 634

Query: 413 RMYGKMKDLKCEPN 426
            +Y +M    C P+
Sbjct: 635 VIYEEMITSGCAPD 648



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 3/254 (1%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD   Y+ MI+  GK      A    + M+   +E  V T++ L+  + + G    A   
Sbjct: 402 PDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAEL 461

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
           F  M E  C P    ++I+I++L  +      ++    +K++   P++I YT LV  + R
Sbjct: 462 FEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGR 521

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
           +G   EA      MK  G++P+   Y  +++A  + G    A +V   M   G E + + 
Sbjct: 522 SGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILV 581

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
            N+L+    +  R  +   V   M+  G   D ITY  L+    +  + +    +   M+
Sbjct: 582 LNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 641

Query: 385 RKGCNPNASTFNMI 398
             GC P+     M+
Sbjct: 642 TSGCAPDRKARAML 655



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 39/84 (46%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP +YH ++N   +    D A + +  MK+  +E+++   + L+  +       EA    
Sbjct: 543 SPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVL 602

Query: 207 NRMEEYGCAPDKIAFSIVISILCR 230
             M E G  PD I ++ ++  L R
Sbjct: 603 QFMRENGLRPDVITYTTLMKALIR 626


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 202/461 (43%), Gaps = 75/461 (16%)

Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
           P  V  P    E++ + GK +  + A      +KSR  + T  T++ ++   ++ G   +
Sbjct: 125 PTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEK 184

Query: 202 AVHAFNRM-EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLV 259
               ++ M  E  C PD + +S+++S   +  R   A   FD +K +   P   +YT L+
Sbjct: 185 IHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLL 244

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             + ++G+  +A  + +EMK  G  P V+TY+ +I  L + G++  A+ VF  ML+ GC+
Sbjct: 245 AIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCK 303

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN------------------ 361
           P+ +  NNL+ +  KA R E  L++++QM+ L C  + +TYN                  
Sbjct: 304 PDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAAS 363

Query: 362 ------------------FLIDCHCKDGKLEDAIKVLNSMVRKGCNP------------- 390
                              LID  CK  ++E A+ +L  M  KG  P             
Sbjct: 364 WFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 423

Query: 391 ----------------------NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
                                 +A  + ++ + + K G  + A  ++ +MK + C P+  
Sbjct: 424 KAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVY 483

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YN LM     +   +      + MEEN   P++N++ I++      G    A +   +M
Sbjct: 484 AYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKM 543

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  +KP +  Y  +L  L R+G  ++  +L+ +M  RGF
Sbjct: 544 -KDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGF 583



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 157/340 (46%), Gaps = 37/340 (10%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A   +  MK +    TV T++ L++   ++G   +A   F  M + GC PD +  + +I+
Sbjct: 255 ALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLIN 314

Query: 227 ILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA-GNISEAERVFREMKMAGIQ 284
           I  +  R  +A   FD ++  K  P+V+ Y  +++    +    SEA   F +MK  G+ 
Sbjct: 315 IFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVT 374

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE----- 339
           P+ +TYSI+ID  C+  ++ +A  +  EM E G  P    + +L+    KA R E     
Sbjct: 375 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 434

Query: 340 ------------------------------KVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
                                         + + ++N+MK++GC  D   YN L+    +
Sbjct: 435 FLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVR 494

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            G +E+A   L +M   GC P+ ++ N+I   +++ G    A  M+ KMKD   +P+ V+
Sbjct: 495 AGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVS 554

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
           YN ++   + S   +   KL +EM     E +  TY  ++
Sbjct: 555 YNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSIL 594



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 158/363 (43%), Gaps = 41/363 (11%)

Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEYGCAPDKIAFSIVISILCRKRR 233
           K RN E  + T+  L+R     GL  E       M     C       S V+ IL + + 
Sbjct: 87  KRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKM 146

Query: 234 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG-IQPNVYTYS 291
            ++A S F  +K  K +P    Y +++    + G+  +   ++ EM   G   P+  TYS
Sbjct: 147 VNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYS 206

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
           +++ A  + G+   A  +F EM   G  P +  +  L+ ++ K S  EK L +  +MK  
Sbjct: 207 VLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFK-SGDEKALGLVQEMKDK 265

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           GC     TY  LI    K G++EDA  V  +M++ GC P+    N +     K G +  A
Sbjct: 266 GCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDA 325

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
            +++ +M+ LKC PN VTYN +++ +F +           ++M+ N V P+  TY ILI 
Sbjct: 326 LKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILID 385

Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +C                                    +  +++K   L+E+M ++GF 
Sbjct: 386 GFC------------------------------------KTNRVEKALLLLEEMDEKGFP 409

Query: 531 ARP 533
             P
Sbjct: 410 PCP 412



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 142/301 (47%), Gaps = 4/301 (1%)

Query: 148 PD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA-GLAAEAVH 204
           PD  L + +IN+ GK  + + A    D M+S      V T++ +++    +   A+EA  
Sbjct: 304 PDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAAS 363

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
            F +M+  G  P    +SI+I   C+  R  +A    + + +K F P    Y +L+    
Sbjct: 364 WFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 423

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +A     A  +F E+K    + +   Y+++I  L +CG+ + A D+F EM ++GC P+  
Sbjct: 424 KAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVY 483

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +N LM   V+A   E+       M+  GC  D  ++N +++   + G+ E A ++   M
Sbjct: 484 AYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKM 543

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
                 P+A ++N I   +S+ G    A ++  +M     E + +TY+ +++        
Sbjct: 544 KDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDED 603

Query: 444 D 444
           D
Sbjct: 604 D 604



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 1/187 (0%)

Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           F   P  Y  +IN  GK ++++ A      +K      +   ++++++   + G  +EAV
Sbjct: 408 FPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAV 467

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGW 262
             FN M++ GC PD  A++ ++S L R     EA S   ++++    PD+  +  ++ G 
Sbjct: 468 DLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGL 527

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
            R G   +A  +F +MK + I+P+  +Y+ ++ +L R G    A  +  EM   G E + 
Sbjct: 528 ARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDH 587

Query: 323 ITFNNLM 329
           IT+++++
Sbjct: 588 ITYSSIL 594



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 1/157 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S  +Y  MI   GK  +   A    + MK       V  ++ L+   VRAG+  EA  A 
Sbjct: 446 SARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSAL 505

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRA 265
             MEE GC PD  + +I+++ L R  R  +A   F  +KD   +PD + Y  ++    R+
Sbjct: 506 RTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRS 565

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           G   EA ++ REM   G + +  TYS +++A+ +  +
Sbjct: 566 GMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDE 602


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 10/368 (2%)

Query: 167 AWHFIDLMKSRNVEITVDTFSIL----VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           A   ++ M +R V  TV T++ L    V R  R G+          ME  G     + ++
Sbjct: 201 AKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVD----EILGLMEREGVVASLVTYT 256

Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
           I+I       R  EA+  ++ + ++  E DV VYT+++   CRAGN+  A  +F EM   
Sbjct: 257 ILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICR 316

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           GI PN  T+  +I  +C+ GQ+  A  +  EM   G + N + FN +M  + K    ++ 
Sbjct: 317 GIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEA 376

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
            ++ + M+R G EAD  TYN L    CK  + E+A +VLN MV KG  PN  T       
Sbjct: 377 FRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEI 436

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
             + G++    R    ++     PN VTYN L+  ++ ++       LK EM E  + P+
Sbjct: 437 YCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPD 496

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
           V TY  LI   C +   + A K   EM+  K ++     Y  ++  L + G+  +  +L 
Sbjct: 497 VFTYTSLIHGECIVDKVDEALKLFNEML-VKGIRGNVKTYTAIISGLSKEGRADEALKLY 555

Query: 522 EKMVDRGF 529
           ++M+  G 
Sbjct: 556 DEMMRMGL 563



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 153/343 (44%), Gaps = 2/343 (0%)

Query: 169 HFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISIL 228
             + LM+   V  ++ T++IL+  Y  +    EA   +  M E     D   ++ +IS  
Sbjct: 238 EILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWN 297

Query: 229 CRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           CR      A + FD +  +   P+   +  L+ G C+AG +  AE +  EM+  G+  NV
Sbjct: 298 CRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNV 357

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
             ++ ++D  C+ G +  A  +   M   G E +  T+N L     K  R E+  +V N 
Sbjct: 358 VIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNV 417

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M   G   + +T    I+ +C++G L +  + L ++ ++G  PN  T+N +    SK   
Sbjct: 418 MVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEK 477

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
           V  AH +  +M +    P+  TY  L+         D  LKL  EM    +  NV TY  
Sbjct: 478 VKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTA 537

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
           +I+     G  + A K   EM+    L P   V+E ++  L +
Sbjct: 538 IISGLSKEGRADEALKLYDEMMRMG-LIPDDRVFEALVGSLHK 579



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 135/255 (52%), Gaps = 1/255 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           +  +I+   K  Q + A   ++ M+ + V++ V  F+ ++  Y + G+  EA    + ME
Sbjct: 325 FGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIME 384

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G   D   ++I+ S LC+  R  EA+   + + +K   P+V+     +  +C+ GN++
Sbjct: 385 RKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLA 444

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           E ER  R ++  G+ PN+ TY+ +IDA  +  ++ +AH + AEM+E G  P+  T+ +L+
Sbjct: 445 EPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLI 504

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + ++ L+++N+M   G   +  TY  +I    K+G+ ++A+K+ + M+R G  
Sbjct: 505 HGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLI 564

Query: 390 PNASTFNMIFRCISK 404
           P+   F  +   + K
Sbjct: 565 PDDRVFEALVGSLHK 579



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 7/289 (2%)

Query: 150 LYHEMINL---AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +Y  MI+    AG VR+   A    D M  R +     TF  L+    +AG    A    
Sbjct: 289 VYTSMISWNCRAGNVRR---ASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILL 345

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
             M+  G   + + F+ ++   C++    EA    D ++ K FE DV  Y  L  G C+ 
Sbjct: 346 EEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKL 405

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
               EA+RV   M   G+ PNV T +  I+  C+ G +         + + G  PN +T+
Sbjct: 406 HRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTY 465

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+  + K  + ++   +  +M   G   D  TY  LI   C   K+++A+K+ N M+ 
Sbjct: 466 NTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLV 525

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           KG   N  T+  I   +SK G  + A ++Y +M  +   P+   +  L+
Sbjct: 526 KGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALV 574



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 126/291 (43%), Gaps = 3/291 (1%)

Query: 240 FFDSLKDKFEPDVIV--YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           FF  + +    D+ V   T +V   CR G +  A+ +  EM   G+ P V+TY+ +++A 
Sbjct: 168 FFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNAC 227

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
                     ++   M   G   + +T+  L+  +  + R  +  +VY +M     E D 
Sbjct: 228 VVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDV 287

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
             Y  +I  +C+ G +  A  + + M+ +G  PN  TF  +   + K G +  A  +  +
Sbjct: 288 YVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEE 347

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M+    + N V +N +M  +      D   +L+  ME    E +V TY IL +  C +  
Sbjct: 348 MQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHR 407

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           +  A + +  M+ EK + P        ++   + G L + E  +  +  RG
Sbjct: 408 YEEAKRVLNVMV-EKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 174/353 (49%), Gaps = 5/353 (1%)

Query: 177 RNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE 236
           R + + +  +S L+ R        EA   +  + + G  P+   F++++  + R  + + 
Sbjct: 204 RGIRVPMPAWSDLMNRLPSV---PEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLAS 260

Query: 237 AQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
           A++ FD  L+   +P V+ +  L+ G C+A +++ A  +   M  AGI P+VYTY   I 
Sbjct: 261 ARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQ 320

Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
            LC+ G+I  A ++F EM E G  PN++    L+  H K       L++  +M   G +A
Sbjct: 321 GLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKA 380

Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
           D + YN L++  C+   ++ A  ++  M + G  P+  T+  +     K G+++ A  M 
Sbjct: 381 DLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMK 440

Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
            +M D     + VTY  L+   + +  +    ++  EM E  ++P+  TY ++I  +C  
Sbjct: 441 QEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKN 500

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           G     +K+++EM + K   PG   Y +V+      GQ++  + L+  M++ G
Sbjct: 501 GDVKTGFKHLKEM-QNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 552



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 158/331 (47%), Gaps = 11/331 (3%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L  +MI  +GK+     A +  D M  R V+ TV TF+ L+    +A     A      M
Sbjct: 248 LMRDMIR-SGKLAS---ARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLM 303

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
            + G APD   +   I  LC+  R  +A   F+ + ++   P+ +V T L+   C+ G++
Sbjct: 304 AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDV 363

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
           +    +  EM   G++ ++  Y+ +++  CR   +  A+D+  EM + G +P+ +T+  L
Sbjct: 364 TAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL 423

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           +    K    +  +++  +M   G   D +TY  LI    K G+  DA ++L  M+  G 
Sbjct: 424 IDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGL 483

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT---SKSTDM 445
            P+ +T+ M+     K GDV    +   +M++    P  VTYN++M  F +    K+ DM
Sbjct: 484 QPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADM 543

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +L     M    V PN  TY IL+  +C  G
Sbjct: 544 LL---NAMLNIGVCPNDITYNILLDGHCKHG 571



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 5/213 (2%)

Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
            +L W     M +R V+  +  ++ LV  + R      A      M + G  PDK+ ++ 
Sbjct: 367 LELRWE----MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 422

Query: 224 VISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
           +I   C++     A      + D+    D + YT L+ G  +AG   +AER+  EM  AG
Sbjct: 423 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 482

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           +QP+  TY++VIDA C+ G +        EM   G  P  +T+N +M       + +   
Sbjct: 483 LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNAD 542

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLED 375
            + N M  +G   + ITYN L+D HCK GK+ D
Sbjct: 543 MLLNAMLNIGVCPNDITYNILLDGHCKHGKVRD 575



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 20/307 (6%)

Query: 147 SPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           +PD+Y     + G  K  +   A    + M  R +       + L+  + + G     + 
Sbjct: 309 APDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLE 368

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
               M   G   D +A++ +++  CR R    A    + + KD  +PD + YT L+ G C
Sbjct: 369 LRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCC 428

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + G +  A  + +EM   G+  +  TY+ +I  L + G+   A  +  EM+E G +P++ 
Sbjct: 429 KEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNT 488

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  ++    K    +   +   +M+  G     +TYN +++  C  G++++A  +LN+M
Sbjct: 489 TYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAM 548

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD---LKCEPNTVT----YNILMQM 436
           +  G  PN  T+N++             H  +GK++D   LK     V+    Y  L+  
Sbjct: 549 LNIGVCPNDITYNILLD----------GHCKHGKVRDTEELKSAKGMVSDFGVYTSLINE 598

Query: 437 FATSKST 443
           F   KS 
Sbjct: 599 FVKKKSA 605


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 177/360 (49%), Gaps = 17/360 (4%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T ++L+  +   G   +A      M +  CAPD++++  V+  LC+  R  EA   F   
Sbjct: 214 TLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDR 273

Query: 245 KDKFEPDVIVYTNLVRGW-------CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
           +             +RG+       C+   I EA ++F +M    + P+ ++Y I+ID L
Sbjct: 274 ELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGL 333

Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
            + G++  A ++F ++L  G  P+++ + +L+     A+  +   +++  M R GC    
Sbjct: 334 AKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 393

Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
           +TYN +ID  CK G LE+A  ++  M+  G  P+  T+N +   + K   V  A  ++ +
Sbjct: 394 VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 453

Query: 418 MKDLKCEPNTVTYN-ILMQMFATSK--------STDMVLKLKKEMEENEVEPNVNTYRIL 468
           M+ L C PN  ++N I++ +   SK          D   +L K M ++   P+V TY  L
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I+  C +   ++A   + +M++ +C KP       ++  L +AG++++  E+++ MV  G
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQC-KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 572



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 176/394 (44%), Gaps = 11/394 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+       FD A      M  R    +  T+++++    + G+  EA     +M 
Sbjct: 361 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 420

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA---- 265
           E G  PD + ++ V+  LC+  R  EA   F+ ++     P+   +  ++ G C+     
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480

Query: 266 -----GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
                G + EA R+ + M   G  P+V TYS +I  LC   ++  A  +  +M++  C+P
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540

Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
             +T N L+    KA R ++  +V + M   G   D +TYN L+  HC+ G+ E A ++L
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600

Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
           + MV +G  PN  T+  +   + K   +  A  ++ +MK   C PN  TY  L+  F ++
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 660

Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE-KCLKPGSS 499
              D  LKL  EM    + P+   Y  L    C  G    A + +RE  E  +    G  
Sbjct: 661 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE 720

Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
           VY   +  L  AG+++     V  MV  G    P
Sbjct: 721 VYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAP 754



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 178/398 (44%), Gaps = 13/398 (3%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP  Y+ MI+ + K    + A   I  M        V T++ ++    ++    EA+  F
Sbjct: 392 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 451

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEA------QSFFDSLK----DKFEPDVIVYT 256
           N ME  GC P++ + + +I  LC++ +  +A         F  LK    D   PDV+ Y+
Sbjct: 452 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYS 511

Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
            L+ G C    + +A  +  +M     +P V T + +I  LC+ G+I  A +V   M+  
Sbjct: 512 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 571

Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
           G  P+ +T+N L+  H +A +TE+  ++ + M   G   + +TY  L+   CK  +L +A
Sbjct: 572 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 631

Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
             V   M   GC PN  T+  +       G V+G  +++G+M      P+ V Y  L   
Sbjct: 632 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 691

Query: 437 FATSKSTDMVLKLKKEMEENEVEP--NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
              S  +   L++ +E  E+          YR  +      G    A  ++R+M+    L
Sbjct: 692 LCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQL 751

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
            P       ++  L ++GQ  +   ++E+++D  +  +
Sbjct: 752 -PAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGK 788



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 169/378 (44%), Gaps = 11/378 (2%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A    + M  RNV     ++ IL+    +AG   +A + F ++   G  P  +A++
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 223 IVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            +I  LC      +A+  F D  +    P  + Y  ++   C+ G + EA  + ++M   
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G  P+V TY+ V+D LC+  ++  A  +F EM  +GC PN  + N ++    + S+ ++ 
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482

Query: 342 LQ------VYNQMKRL---GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            Q       +  +KR+   G   D +TY+ LI   C   +++DA  +L  MV++ C P  
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T N +   + K G +  A  +   M      P+ VTYN L+     +  T+   +L  +
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M    + PNV TY  L++  C       A     +M    C  P    Y  ++     AG
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC-APNLFTYTALILGFCSAG 661

Query: 513 QLQKHEELVEKMVDRGFT 530
           Q+    +L  +MV  G +
Sbjct: 662 QVDGGLKLFGEMVCAGIS 679



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/463 (20%), Positives = 200/463 (43%), Gaps = 51/463 (11%)

Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSP--DLYHEMINLAGKVRQFD 165
           +P     VI+  C V      +++ S         E  HSP  D+Y+ +I+   K ++ +
Sbjct: 9   APLLFTSVIQGWCNVGRTFEAVKIFSLM-------EECHSPYPDVYNVLIDSLSKRQETE 61

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP--------- 216
                + +M  R       TF+ ++    +AG   EA    + M      P         
Sbjct: 62  AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121

Query: 217 ----------------------DKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVI 253
                                 +  A++IV+  LC+  R  +A     ++ +K  P    
Sbjct: 122 HELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAG 181

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
              +++ G   +G I EA +V+RE +    +P + T +++++  C  GQ+ +A ++   M
Sbjct: 182 SLDSVLVGLMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAM 238

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT------YNFLIDCH 367
            +  C P+ +++  ++    KA R E+ ++++   +     + + +      YN +I   
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
           C++ ++++A+++   M  +  +P++ ++ ++   ++K G +N A  ++ K+      P+T
Sbjct: 299 CQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPST 358

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           V Y  L+     + S D   +L  +M      P+  TY ++I   C  G    A   I++
Sbjct: 359 VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKK 418

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
           MIE+  + P    Y  V+  L ++ ++++   L  +M   G T
Sbjct: 419 MIEDGHV-PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCT 460



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/362 (20%), Positives = 145/362 (40%), Gaps = 47/362 (12%)

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 268
           M + G  P  + F+ VI   C   R  EA   F  +++   P   VY  L+    +    
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
              +++ + M   G  P+ +T++ ++  LC+ G++  A  V  EM      P   T + L
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
                     E+  Q+   M      A++  YN ++   CK  +++DA+++  +M  K  
Sbjct: 121 AHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEKRI 176

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
              A + + +   +   G ++ A ++Y   ++ + EP  VT N+L++ F +    D   +
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVY---RENRREPCLVTLNVLLEGFCSRGQVDKARE 233

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI--REM------------------ 488
           L + M + E  P+  +Y  ++   C  G    A +    RE+                  
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNI 293

Query: 489 --------------------IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
                               + E+ + P S  Y +++  L +AG+L     L +K++  G
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG 353

Query: 529 FT 530
            T
Sbjct: 354 VT 355


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 193/412 (46%), Gaps = 12/412 (2%)

Query: 128 LLQVLSFFNWVTARPEFVHS-------PDLYHEMINLAG--KVRQFDLAWHFIDLMKSRN 178
           L+   +   W+    + V +       PDL+   +  AG  +  + D A+   D M+   
Sbjct: 280 LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLG 339

Query: 179 VEI-TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
             +  V T++ L     +   +++A+     M E G     +  +IVI  LC+      A
Sbjct: 340 TLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGA 399

Query: 238 QSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
               + + D    PDVI Y  L+   C+AGNI++A  +  EM   G++ + +T + V+  
Sbjct: 400 LGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYN 459

Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
           LC+  +   A  +     + G  P+ +++  +M  + K   +E  L+++++M        
Sbjct: 460 LCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPS 519

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
             TYN LI    + G+L++AI  LN ++ KG  P+ +T+N+I     K GD+  A + + 
Sbjct: 520 ISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHN 579

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           KM +   +P+ VT N LM     +   D  LKL +   E   + +V TY  LI   C  G
Sbjct: 580 KMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDG 639

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
             + A  +  +M E + L+P +  Y +VL  L  AG+ ++ + ++ K+ + G
Sbjct: 640 DVDTALHFFADM-EARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG 690



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 159/350 (45%), Gaps = 3/350 (0%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ + +   K R    A   ++ M+ + V+ T+ T +I+++   + G    A+  
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
            N+M + G APD I ++ +I   C+    ++A +  D + +   + D      ++   C+
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
                EA+ + +     G  P+  +Y  V+ A  +      A  ++ EM+E    P+  T
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N L++   +  R ++ +   N++   G   D  TYN +I  +CK+G LE+A +  N MV
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
                P+  T N +   +   G ++ A +++    +   + + +TYN L+Q        D
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
             L    +ME   ++P+  TY ++++     G    A   + ++ E   L
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTL 692



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 157/337 (46%), Gaps = 9/337 (2%)

Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD----KFEPDVI 253
           LAA+ +H+  R       P   A + V+S L R    S  Q+  D+ +     +  P+  
Sbjct: 149 LAAQLLHSLRR--RVRVRPSLQAANAVLSALARSPSTSP-QASLDAFRSIVALRLHPNHY 205

Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
            +  LV   C  G +++A      M+  G+ P+  TY+ +++A CR G +  A  + A M
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265

Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
            + G  P   T+N L+  + +    ++  +V   M   G E D  TYN L    C+ GK+
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKV 325

Query: 374 EDAIKVLNSMVRKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
           ++A ++ + M R G   P+  T+N +     K    + A R+  +M++   +   VT+NI
Sbjct: 326 DEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNI 385

Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
           +++        +  L    +M ++ + P+V TY  LI  +C  G+   AY  + EM+  +
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV-RR 444

Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            LK  +     VL  L +  + ++ + L++    RGF
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGF 481



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 126/274 (45%), Gaps = 36/274 (13%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D M  + +  ++ T++ L++   R G   EA+   N + E G  PD   ++I+I 
Sbjct: 504 ALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIH 563

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
             C++     A  F + + ++ F+PDV+    L+ G C  G + +A ++F      G + 
Sbjct: 564 AYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV 623

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           +V TY+ +I  +C+ G +  A   FA+M   G +P++ T+N ++    +A RTE+   + 
Sbjct: 624 DVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNML 683

Query: 346 NQMKRLGC--------------------------EADTI---------TYNFLIDCHCKD 370
           +++   G                           E +T+          Y  L++  C  
Sbjct: 684 HKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTS 743

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
           G+ ++A  +L+ M++KG + ++ST+  +   + K
Sbjct: 744 GQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 11/178 (6%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A    +    +  ++ V T++ L++   + G    A+H F  ME  G  PD   ++
Sbjct: 605 KLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664

Query: 223 IVISILCRKRRASEAQSFF------DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
           +V+S L    R  EAQ+         +L   F   ++  +++          +E E V  
Sbjct: 665 VVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVEN 724

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVK 334
               A        Y+ +++ LC  GQ   A  +  EM++ G   +S T+  LM   VK
Sbjct: 725 PQDSAS-----EAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 177/361 (49%), Gaps = 2/361 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F+  M     E  + TF+ L+  Y       +A+  F+++   G  P+ + ++ +I  LC
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + R  + A   F+ +  +   P+V+ Y  LV G C  G   +A  + R+M    I+PNV 
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           T++ +IDA  + G++  A +++  M+++   P+  T+ +L+         ++  Q++  M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
           +R GC  + + Y  LI   CK  ++ED +K+   M +KG   N  T+ ++ +    +G  
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A  ++ +M   +  P+  TYN+L+     +   +  L + + M + E++ N+ TY I+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I   C +G   +A+     +   K +KP    Y  ++    R G + + + L +KM + G
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFS-KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498

Query: 529 F 529
           F
Sbjct: 499 F 499



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 175/358 (48%), Gaps = 4/358 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PDL  +  ++N      + + A    D +     +  V T++ L+R   +      AV  
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
           FN+M   G  P+ + ++ +++ LC   R  +A     D +K + EP+VI +T L+  + +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA+ ++  M    + P+V+TY  +I+ LC  G +  A  +F  M   GC PN + 
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +  L+    K+ R E  ++++ +M + G  A+TITY  LI  +C  G+ + A +V N M 
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
            +   P+  T+N++   +   G V  A  ++  M+  + + N VTY I++Q        +
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
               L   +    ++PNV TY  +I+ +C  G  + A    ++M E+  L P  SVY+
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL-PNESVYK 507



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 170/359 (47%), Gaps = 3/359 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           F  ++ SR +   +D F+ L+    +       +  F +M+  G  P     +IV+  +C
Sbjct: 71  FTRMVHSRPLPSIID-FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC 129

Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
              +   A  F   + K  FEPD++ +T+L+ G+C    I +A  +F ++   G +PNV 
Sbjct: 130 LSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVV 189

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+ +I  LC+   +  A ++F +M   G  PN +T+N L+    +  R      +   M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
            +   E + IT+  LID   K GKL +A ++ N M++    P+  T+  +   +   G +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A +M+  M+   C PN V Y  L+  F  SK  +  +K+  EM +  V  N  TY +L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           I  YC +G  + A +   +M   +   P    Y ++L  L   G+++K   + E M  R
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 1/224 (0%)

Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
           Q   A D+F  M+     P+ I F  L+ V  K +R + V+ ++ QM+ LG      T N
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
            ++ C C   +   A   L  M++ G  P+  TF  +         +  A  ++ ++  +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
             +PN VTY  L++    ++  +  ++L  +M  N   PNV TY  L+T  C +G W +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
              +R+M++ + ++P    +  ++    + G+L + +EL   M+
Sbjct: 243 AWLLRDMMKRR-IEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 1/274 (0%)

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           Y  ++R        ++A  +F  M  +   P++  ++ ++  + +  +      +F +M 
Sbjct: 51  YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
            +G  P   T N +M     +S+  +      +M +LG E D +T+  L++ +C   ++E
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
           DAI + + ++  G  PN  T+  + RC+ K   +N A  ++ +M      PN VTYN L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
                         L ++M +  +EPNV T+  LI  +  +G    A +    MI+   +
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS-V 289

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            P    Y  ++  L   G L +  ++   M   G
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323


>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
          Length = 414

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 175/352 (49%), Gaps = 7/352 (1%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-L 244
           FS +      AGL   A +   +   +GC  +  A++ +++ L    RA +A + F+S +
Sbjct: 14  FSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVALFESWI 73

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +D  + PDV  +  +++G CR GN+ +A  +   M   G  P+  T +I++D LCR  Q+
Sbjct: 74  QDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQV 133

Query: 304 TRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
            + H+V   +   G C PN +T+ +++  + KA R +    VYN M + G   +T+TYN 
Sbjct: 134 NKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNV 193

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI+ + K   +E A+++   ++   C P+  TFN +     + G ++ A R++ +M    
Sbjct: 194 LINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHH 253

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEME-ENEVEPNVNTYRILITMYCGMGHWNNA 481
            +PN  T++I++    T   +   L L +E+    ++ P    Y  +I + C  G  + A
Sbjct: 254 IQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEA 313

Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
              + +M EEK   P    Y +++      G++ +   L  KMV+ G   RP
Sbjct: 314 NLIVTDM-EEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETG--CRP 362



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 140/277 (50%), Gaps = 5/277 (1%)

Query: 143 EFVHSPDLYHEMINLAG--KVRQFDLAWHFIDLMKSRNVEI-TVDTFSILVRRYVRAGLA 199
           EF  SPD   + I + G  +V+Q +     +  ++   V +  V T++ ++  Y +AG  
Sbjct: 110 EFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRM 169

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNL 258
            +A   +N M + G  P+ + ++++I+   +      A + ++  +     PDV+ + +L
Sbjct: 170 KDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSL 229

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM-LEVG 317
           + G+CR G + +A R++ EM    IQPNVYT+SI+I +LC   +   A  +  E+ +   
Sbjct: 230 IDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRAD 289

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             P +  +N ++ +  K  + ++   +   M+  GC  D  TY  LI  HC  G++ +A+
Sbjct: 290 IVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAV 349

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
            + + MV  GC P+  T N    C+ K G  N  H++
Sbjct: 350 TLFHKMVETGCRPDNITINSFISCVLKAGMPNEVHQI 386



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 41/339 (12%)

Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           +L+  +W   R E+    +L + +I      R  D    F   ++       V +F++++
Sbjct: 33  LLTKGSWFGCRIEWYAYNNLLNTLI---AHGRAQDAVALFESWIQDGLYSPDVWSFNVVI 89

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--F 248
           +   R G   +A+    RM E+GC+PD I  +I++  LCR ++ ++       L+     
Sbjct: 90  KGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVC 149

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI---------------- 292
            P+V+ YT+++ G+C+AG + +A  V+ +M  +G +PN  TY++                
Sbjct: 150 MPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVR 209

Query: 293 -------------------VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
                              +ID  CRCGQ+  A  ++ EM +   +PN  TF+ ++    
Sbjct: 210 MYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLC 269

Query: 334 KASRTEKVLQVYNQMK-RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
             +R+ + L +  ++  R      T  YN +ID  CK GK+++A  ++  M  KGC+P+ 
Sbjct: 270 TQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDK 329

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
            T+ ++       G +  A  ++ KM +  C P+ +T N
Sbjct: 330 YTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITIN 368



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 143/321 (44%), Gaps = 37/321 (11%)

Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL------- 297
           +  + PD   ++ +      AG +  A  +  +    G +   Y Y+ +++ L       
Sbjct: 4   QSGYVPDAGFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQ 63

Query: 298 -----------------------------CRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
                                        CR G + +A ++   M E GC P++IT N L
Sbjct: 64  DAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNIL 123

Query: 329 MRVHVKASRTEKVLQVYNQMKRLG-CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           +    +  +  K  +V  +++R G C  + +TY  +I  +CK G+++DA  V N M++ G
Sbjct: 124 VDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSG 183

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             PN  T+N++     K  D+  A RMY ++    C P+ VT+N L+  +      D  +
Sbjct: 184 TRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAM 243

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
           ++  EM ++ ++PNV T+ I+I   C       A   +RE+     + P + +Y  ++  
Sbjct: 244 RIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDI 303

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
           L + G++ +   +V  M ++G
Sbjct: 304 LCKGGKVDEANLIVTDMEEKG 324



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 50/112 (44%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + LS    +  R + V    +Y+ +I++  K  + D A   +  M+ +       T++IL
Sbjct: 276 EALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTIL 335

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           +  +   G   EAV  F++M E GC PD I  +  IS + +    +E     
Sbjct: 336 IIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAGMPNEVHQIM 387


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 175/372 (47%), Gaps = 11/372 (2%)

Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
           + D A   +  +     +  V   +IL+++    G  A+A      +E  G +   I ++
Sbjct: 76  ELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERV---VEALGPSATIITYN 132

Query: 223 IVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
            +++  CR      A+   DS+   F PD   Y  L+R  C  G + +A  VF +M   G
Sbjct: 133 TMVNGYCRAGNIDAARRMIDSVP--FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRG 190

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             P+V TYSI++DA C+     +A  +  EM   GCEP+ +T+N L+          + L
Sbjct: 191 CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEAL 250

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
           +V N +   GC+ D +TY  ++   C   + E+A K+L  M    C P+  TFN +   +
Sbjct: 251 KVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSL 310

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE--- 459
            + G V  A ++  +M +  C P+ +TY+ +M      +  D  +KL KE+    V    
Sbjct: 311 CQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNC 370

Query: 460 -PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ-LRRAGQLQKH 517
            P+  T+  +IT  C  G ++ A K + EM E  C+ P  + Y  ++   L ++ + ++ 
Sbjct: 371 IPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCI-PDITTYNCIVDGFLCKSCKTEEA 429

Query: 518 EELVEKMVDRGF 529
            +L+  MV  G 
Sbjct: 430 LDLLNLMVSNGL 441



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 160/325 (49%), Gaps = 6/325 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +++   K   +  A   +D M+S+  E  + T+++L+      G   EA+   N + 
Sbjct: 198 YSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLP 257

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
            YGC PD + ++ V+  LC   R  EA      +  +   PD + +  ++   C+ G + 
Sbjct: 258 SYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVG 317

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA----HDVFAEMLEVGCEPNSITF 325
            A +V  +M   G  P++ TYS ++D LC+  ++  A     ++ AEM+   C P+ +TF
Sbjct: 318 RATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTF 377

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH-CKDGKLEDAIKVLNSMV 384
           N ++    +    ++ ++V ++M   GC  D  TYN ++D   CK  K E+A+ +LN MV
Sbjct: 378 NTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMV 437

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+ +T+  +   +S+  ++  A  M+ +++ +   P+ + YN ++        TD
Sbjct: 438 SNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTD 497

Query: 445 MVLKLKKEMEENEVEPNVNTYRILI 469
           + +     M  N   P+ +TY IL+
Sbjct: 498 LAIDFFAYMVSNGCMPDESTYIILV 522



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 181/417 (43%), Gaps = 49/417 (11%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI--LVRRYVRAGLAAEAVHAFNR 208
           Y+ M+N   +    D A   ID     +V    DTF+   L+R     G   +A+  F+ 
Sbjct: 131 YNTMVNGYCRAGNIDAARRMID-----SVPFAPDTFTYNPLIRALCVRGCVLDALAVFDD 185

Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
           M   GC+P  + +SI++   C++    +A    D ++ K  EPD++ Y  L+   C  G+
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGD 245

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + EA +V   +   G +P+  TY+ V+ +LC   +   A  +  +M    C P+ +TFN 
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNA 305

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS----M 383
           ++    +     +  +V  QM   GC  D ITY+ ++D  CK+ ++++AIK+L      M
Sbjct: 306 VITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEM 365

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN----------------- 426
           V K C P+  TFN I   + + G  + A ++  +M +  C P+                 
Sbjct: 366 VSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCK 425

Query: 427 -------------------TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
                              T TY  L    +     +  + + + ++   + P+   Y  
Sbjct: 426 TEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNA 485

Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           ++   C     + A  +   M+   C+ P  S Y ++++ +   G L++ +EL+  +
Sbjct: 486 ILLGLCKKWRTDLAIDFFAYMVSNGCM-PDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 32/301 (10%)

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV--------- 309
           +RG  + G +  A R+   +  +G  P V   +I+I  LC  G++  A  V         
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSAT 127

Query: 310 ---FAEMLEVGCE-----------------PNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
              +  M+   C                  P++ T+N L+R           L V++ M 
Sbjct: 128 IITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDML 187

Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
             GC    +TY+ L+D  CK+   + A+ +L+ M  KGC P+  T+N++   +   GDV 
Sbjct: 188 HRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVG 247

Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
            A ++   +    C+P+ VTY  +++   +S+  +   KL  +M  N+  P+  T+  +I
Sbjct: 248 EALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVI 307

Query: 470 TMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
           T  C  G    A K + +M E  C   +   SS+ + + ++ R    ++  +EL+ +MV 
Sbjct: 308 TSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVS 367

Query: 527 R 527
           +
Sbjct: 368 K 368


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 173/358 (48%), Gaps = 3/358 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC--APDKIAFSIVISILCRK 231
           M    VE T+ T++ L+  +++ G   EA      ME  G   + + + F++VIS L R+
Sbjct: 228 MLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLARE 287

Query: 232 RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
                A    DS++   +     Y  L+      G + +AE +  EM+  GI P V TY+
Sbjct: 288 GHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYN 347

Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
            +I  L +C Q   A   FAEM  +G  P+ IT+N+L+  + KA   ++ L +   ++R 
Sbjct: 348 AIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRA 407

Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
           G     +TYN LID +C+ G L +A ++   MV +GC P+  T+ ++     K+ ++  A
Sbjct: 408 GLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMA 467

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
              + +M     +P+   YN  +    T  ST M  +L++ M    + P+  TY ++I  
Sbjct: 468 REFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDG 527

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            C  G+  +A +   +M+ +  L+P    Y  ++      G L++  +L+  MV  G 
Sbjct: 528 LCKTGNLKDAKRLKTKMVSDG-LQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGL 584



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 159/351 (45%), Gaps = 36/351 (10%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M++  +  TV T++ ++   ++   A  A   F  M   G  PD I ++ +++  C+   
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393

Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             EA      L+     P V+ Y  L+ G+CR G+++EA R+  EM   G  P+V TY+I
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +++   +   +  A + F EML  G +P+   +N  +   +  S T    Q+   M   G
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513

Query: 353 CEADTITYNFLIDCHCKDGKLEDAI----------------------------------- 377
              DT+TYN +ID  CK G L+DA                                    
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           K+LN MV  G  P+  T+ ++     + G++  A+  + KM D+  EPN +TYN+L+   
Sbjct: 574 KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             +  T +  +   EM E  + PN  TY +LI   C  G+W +A +   EM
Sbjct: 634 CMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEM 684



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 160/348 (45%), Gaps = 10/348 (2%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ ++N   K      A   +  ++   +  TV T++ L+  Y R G  AEA   
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
              M E GC PD   ++I+++   + R  + A+ FFD +  K  +PD   Y   +   C 
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRI---CA 492

Query: 265 AGNISEAERVF--RE-MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
              +S     F  RE M + GI P+  TY+++ID LC+ G +  A  +  +M+  G +P+
Sbjct: 493 ELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            IT+  L+  H +     +  ++ N M   G +   +TY  L+   C+ G L  A     
Sbjct: 553 CITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFR 612

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            M+  G  PN  T+N++   +   G    A R + +M +    PN  TY +L+       
Sbjct: 613 KMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREG 672

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +    ++L  EM +N + P+  T+  L   +   GH  +A +Y+  ++
Sbjct: 673 NWADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENIV 719



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 166/377 (44%), Gaps = 38/377 (10%)

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKF 248
            R    A  +   + AF  +  +G APD    + V+ +L    R  + ++ + + L+ + 
Sbjct: 174 TRHATPAACSTLCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRV 233

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG-------IQPNV-------------- 287
           EP ++ Y  L+  + + G   EA  + +EM+  G       +  NV              
Sbjct: 234 EPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENA 293

Query: 288 ---------------YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
                          +TY+ +I AL   G + +A  +  EM   G  P  +T+N ++   
Sbjct: 294 VKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGL 353

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
           +K  + E     + +M+ +G   D ITYN L++ +CK G L++A+ +L  + R G  P  
Sbjct: 354 LKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTV 413

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N +     +LGD+  A R+  +M +  C P+  TY ILM      ++  M  +   E
Sbjct: 414 LTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDE 473

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           M    ++P+   Y   I     +     A++ +RE++  K + P +  Y +++  L + G
Sbjct: 474 MLSKGLQPDCFAYNTRICAELTLSSTPMAFQ-LREVMMLKGIYPDTVTYNVIIDGLCKTG 532

Query: 513 QLQKHEELVEKMVDRGF 529
            L+  + L  KMV  G 
Sbjct: 533 NLKDAKRLKTKMVSDGL 549


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 178/369 (48%), Gaps = 5/369 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L   MI+  G++ + +LA    D         TV  FS L+  Y R+G   EA+  F+ M
Sbjct: 192 LASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSM 251

Query: 210 EEYGCAPDKIAFSIVISILCRKRRAS--EAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAG 266
           +  G  P+ + ++ VI   C K      +    FD  L +  +PD I + +L+    R G
Sbjct: 252 KSNGLMPNLVTYNAVIDA-CGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGG 310

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
               A R+F  M   GI  +++TY+ ++DA+C+ GQ+  A ++ +EM      PN +T++
Sbjct: 311 LWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYS 370

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            ++  + K  R +  L ++N+MK LG   D ++YN L+  + K G+ E A+ V   M   
Sbjct: 371 TMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENA 430

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   +  T+N +     K    +   R++ +MK  +  PN +TY+ L+ +++        
Sbjct: 431 GIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEA 490

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           +++ +E ++  ++ +V  Y  LI   C  G   ++   + EM +E  ++P    Y  ++ 
Sbjct: 491 MEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEG-IRPNVVTYNSIID 549

Query: 507 QLRRAGQLQ 515
              R+   Q
Sbjct: 550 AFGRSASAQ 558



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 155/344 (45%), Gaps = 56/344 (16%)

Query: 137 WVTARPEFVHSPD--------LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           W  AR  F    D         Y+ +++   K  Q DLA+  +  M ++N+   V T+S 
Sbjct: 312 WEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYST 371

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA----------- 237
           ++  Y + G   +A++ FN M+  G   D+++++ ++S+  +  R  +A           
Sbjct: 372 MIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAG 431

Query: 238 -----------------QSFFDSLKDKFE--------PDVIVYTNLVRGWCRAGNISEAE 272
                            Q  +D ++  FE        P+++ Y+ L+  + + G   EA 
Sbjct: 432 IRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAM 491

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            VFRE K AG++ +V  YS +IDALC+ G +  +  +  EM + G  PN +T+N+++   
Sbjct: 492 EVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAF 551

Query: 333 VKASRTEKVLQVYNQMKRLGCEA-DTITYNFLIDCHCKDGKLEDAIKVLNSM-VRKGCNP 390
            +++  + V+    +   L  E+  +I     I+    D +    I++   +   K C  
Sbjct: 552 GRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEA 611

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
             S    I  CI  LG       ++ KM +LK +PN VT++ ++
Sbjct: 612 KNSGKQEIL-CI--LG-------VFQKMHELKIKPNVVTFSAIL 645



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 8/280 (2%)

Query: 255 YTNLVRGWCRAGNISEAERVFR--EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
           YT L+R     G+ ++A R F     + +G        S +I  L R G++  A  VF  
Sbjct: 156 YTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDT 215

Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG- 371
            L+ G       F+ L+  + ++    + ++V++ MK  G   + +TYN +ID   K G 
Sbjct: 216 ALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV 275

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           + +  +++ + M+  G  P+  TFN +    S+ G    A R++  M D   + +  TYN
Sbjct: 276 EFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYN 335

Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
            L+         D+  ++  EM    + PNV TY  +I  Y  +G  ++A     EM   
Sbjct: 336 TLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEM--- 392

Query: 492 KCLKPGSS--VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           K L  G     Y  +L    + G+ ++  ++ ++M + G 
Sbjct: 393 KFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGI 432


>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
 gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
          Length = 669

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 2/329 (0%)

Query: 130 QVLSFFNWVTARPEFVH-SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           + L+FF W+ ARPE    +   Y+ M+ +    RQ +L+   ++ M  R ++    TFS 
Sbjct: 124 KALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFST 183

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           L+    R     EA+  F RM+  G  PD++ ++ VI +  R  R +EA   ++ LK   
Sbjct: 184 LINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVN 243

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           ++ D + Y  +   + RAG+     ++ +EM+ +G  PN    + ++  L + G++ +A 
Sbjct: 244 WKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAK 303

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            VF EM   G  P  +T + L+ ++ +    ++  +VY  +K  G + D   YN L+   
Sbjct: 304 KVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKAC 363

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
            + G++E A  +L  M R GCNP+  T+       +  G V+ A RM+ K+  L  +P+T
Sbjct: 364 VEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDT 423

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEEN 456
             + ++++    +   +   K+  EM E+
Sbjct: 424 PLFTVMIRACKLAGEIEQASKIFDEMMES 452



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/343 (21%), Positives = 163/343 (47%), Gaps = 39/343 (11%)

Query: 224 VISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           ++++L    R  +A +FF+ LK +   +E +   Y  +++       +  +E++  EM  
Sbjct: 112 IVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTG 171

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            GIQP+ YT+S +I+   RC Q   A   F  M   G  P+ +T+N+++ ++ +  R  +
Sbjct: 172 RGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNE 231

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            +++Y ++K +  + DT+TY  + + + + G  +  ++++  M   G +PNA   N +  
Sbjct: 232 AVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMG 291

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK------------ 448
            +SK G VN A +++ +M+     P  VT +IL++M+    + D   +            
Sbjct: 292 TLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKC 351

Query: 449 -----------------------LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
                                  + KEM+     P+  TYR  +  Y   G  + A +  
Sbjct: 352 DVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMF 411

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +++     KP + ++ ++++  + AG++++  ++ ++M++ G
Sbjct: 412 DKVVALNG-KPDTPLFTVMIRACKLAGEIEQASKIFDEMMESG 453


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 180/383 (46%), Gaps = 2/383 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           PD  + +++   K  ++  A+ F  +M SRN   +    ++LV    + G   EA   + 
Sbjct: 418 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 477

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAG 266
           R+ E G    K+  + +I  LC   +  EA      + ++  P D I Y  L+ G+C  G
Sbjct: 478 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 537

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            +    R+  EM   GIQP++YTY+ ++  LC  G++  A  ++ E    G   N  T+ 
Sbjct: 538 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 597

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +M  + KA+R E V  ++N++     E ++I YN +I  HC++G +  A+++L +M  K
Sbjct: 598 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 657

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN +T++ +   +  +G V  A  +  +M+     PN V Y  L+  +      D  
Sbjct: 658 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 717

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
                EM    + PN  TY ++I  YC +G+   A   + +M +E  + P    Y ++  
Sbjct: 718 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKM-KESGIVPDVVTYNVLTN 776

Query: 507 QLRRAGQLQKHEELVEKMVDRGF 529
              +A  +    ++ ++M   G 
Sbjct: 777 GFCKANDMDNAFKVCDQMATEGL 799



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 6/379 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +++ +I+   K+   + A    D+M S+N+  T  T   L++ + ++     A +A   +
Sbjct: 350 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 409

Query: 210 EEYGCA--PDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAG 266
              G +  PD   +S+V   LC+K R   A  F    L   F P  ++ T LV G C+ G
Sbjct: 410 LSSGLSIHPDN-CYSVV-HWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 467

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              EA  ++  +   G   +  T + +I  LC  G++  A  +  EMLE G   + IT+N
Sbjct: 468 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 527

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+       + E   ++  +M + G + D  TYNFL+   C  GKL+DAIK+ +     
Sbjct: 528 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 587

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N  T+ ++     K   +     ++ ++   K E N++ YNI+++    + +    
Sbjct: 588 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 647

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L+L + M+   + PN  TY  LI   C +G   +A   I EM +E    P    Y  ++ 
Sbjct: 648 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG-FVPNVVCYTALIG 706

Query: 507 QLRRAGQLQKHEELVEKMV 525
              + GQ+   E    +M+
Sbjct: 707 GYCKLGQMDTAESTWLEMI 725



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 141/321 (43%), Gaps = 36/321 (11%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T + L+     AG   EA      M E G   D+I ++ +I   C + +        + +
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            K   +PD+  Y  L+RG C  G + +A +++ E K +G+  N++TY I+++  C+  +I
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++F E+L    E NSI +N +++ H +       LQ+   MK  G   +  TY+ L
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG-----------------------------------C 388
           I   C  G +EDA  +++ M ++G                                    
Sbjct: 670 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 729

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +PN  T+ ++     KLG++  A+ +  KMK+    P+ VTYN+L   F  +   D   K
Sbjct: 730 HPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 789

Query: 449 LKKEMEENEVEPNVNTYRILI 469
           +  +M    +  +  TY  L+
Sbjct: 790 VCDQMATEGLPVDEITYTTLV 810



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/381 (20%), Positives = 159/381 (41%), Gaps = 37/381 (9%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA----- 237
           V +F+ ++    + G    A+  F +ME+ G +P+ + ++ +I+ LC+  R   A     
Sbjct: 243 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 302

Query: 238 -----------------------QSFFDS--------LKDKFEPDVIVYTNLVRGWCRAG 266
                                   +FFD         +   F P+V+V+ NL+ G+C+ G
Sbjct: 303 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMG 362

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
           NI  A ++   M    I P   T   ++   C+  QI  A +   E+L  G   +     
Sbjct: 363 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY 422

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +++    K  R     +    M         +    L+   CKDGK  +A ++   ++ K
Sbjct: 423 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 482

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   +  T N +   +   G +  A R+  +M +     + +TYN L+  F      +  
Sbjct: 483 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 542

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +L++EM +  ++P++ TY  L+   C +G  ++A K   E  +   L      Y ++++
Sbjct: 543 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF-KASGLISNIHTYGIMME 601

Query: 507 QLRRAGQLQKHEELVEKMVDR 527
              +A +++  E L  +++ +
Sbjct: 602 GYCKANRIEDVENLFNELLSK 622



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 151/331 (45%), Gaps = 7/331 (2%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           AV  F  +   G  P     + ++S L +     +    F  + +   PDV  +TN++  
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINA 252

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+ G +  A  +F +M+  GI PNV TY+ +I+ LC+ G++  A ++  +M   G +PN
Sbjct: 253 LCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 312

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  L+   +K +  +KV  V ++M   G   + + +N LID +CK G +E A+K+ +
Sbjct: 313 LKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 372

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM--KDLKCEPNTVTYNILMQMFAT 439
            M+ K   P + T   + +   K   +  A     ++    L   P+   Y+++  +   
Sbjct: 373 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC-YSVVHWLCKK 431

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +      +  K M      P+     +L+   C  G    A +    ++E+    P S 
Sbjct: 432 FRYHS-AFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG--SPASK 488

Query: 500 VYE-MVLQQLRRAGQLQKHEELVEKMVDRGF 529
           V    ++  L  AG+L +   +V++M++RG 
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGL 519



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +  FV +   Y  +I    K+ Q D A      M S N+     T+++++  Y + G   
Sbjct: 691 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 750

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLV 259
           +A +   +M+E G  PD + ++++ +  C+      A    D +  +  P D I YT LV
Sbjct: 751 KANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810

Query: 260 RGW 262
            GW
Sbjct: 811 HGW 813


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 204/426 (47%), Gaps = 17/426 (3%)

Query: 112 VRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFI 171
           VR V++   GV         + FF W   +  + H    Y  +I     V Q+   W  I
Sbjct: 89  VREVMKTDVGVSVK------MQFFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMI 142

Query: 172 -DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCR 230
            +++++    +T    S ++R    A + ++AV  F +++   C P   A++ +I +L  
Sbjct: 143 QEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMH 202

Query: 231 KRRASEAQSFFDSLKDKFE--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +    +    ++ + ++ +  PD + Y+ L+  +C+ G    A  +  EMK  G+QP   
Sbjct: 203 EGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAK 262

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y++++  L +   +  A  +F EM    C P+  T+  L+R   KA R ++    +++M
Sbjct: 263 IYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEM 322

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI----SK 404
           +R GC  DT+  N +I+   K G+L+DAIK+   M    C P+  T+N I + +    S+
Sbjct: 323 RREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSR 382

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           + +++     + +MK     P+  TY+IL+  F  +  T+  + L +EM+E    P    
Sbjct: 383 VSEISS---WFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAA 439

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI        ++ A +  +E ++E C    + VY ++++ L +AG+L    +L ++M
Sbjct: 440 YCSLIDALGKAKRYDLANELFQE-LKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEM 498

Query: 525 VDRGFT 530
              G T
Sbjct: 499 NRLGCT 504



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 178/382 (46%), Gaps = 38/382 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S L+  + + G    A+   N M++ G  P    +++++++L +      A   F+ +
Sbjct: 228 TYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEM 287

Query: 245 KDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + ++  PDV  YT L+RG  +AG + EA   F EM+  G +P+    + +I+ L + G++
Sbjct: 288 RHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRL 347

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTITYNF 362
             A  +F EM  + C P+ +T+N +++   ++ SR  ++   + +MK  G      TY+ 
Sbjct: 348 DDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSI 407

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNP-------------------------------- 390
           LID  CK  + E A+ +L  M  KG  P                                
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENC 467

Query: 391 ---NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              +A  + ++ + + K G ++ A  ++ +M  L C PN   YN LM   A +   D  L
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEAL 527

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
              + M+++   P++N+Y I++      G  + A   +  M ++  +KP +  Y  VL  
Sbjct: 528 TTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNM-KQSAIKPDAVSYNTVLGA 586

Query: 508 LRRAGQLQKHEELVEKMVDRGF 529
           L  AG  ++  +L+++M   GF
Sbjct: 587 LSHAGMFEEAAKLMKEMNAIGF 608



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 168/344 (48%), Gaps = 2/344 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +  +Y  ++ L  K+     A    + M+ +     V T++ L+R   +AG   EA + F
Sbjct: 260 TAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFF 319

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
           + M   GC PD +  + +I+ L +  R  +A   F+ ++  +  P V+ Y  +++    +
Sbjct: 320 HEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFES 379

Query: 266 -GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              +SE    F  MK +GI P+ +TYSI+ID  C+  +  +A  +  EM E G  P    
Sbjct: 380 KSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAA 439

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+    KA R +   +++ ++K     +    Y  +I    K G+L+DA+ + + M 
Sbjct: 440 YCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMN 499

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           R GC PN   +N +   +++ G ++ A     +M+D  C P+  +YNI++   A +   D
Sbjct: 500 RLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPD 559

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
             + +   M+++ ++P+  +Y  ++      G +  A K ++EM
Sbjct: 560 RAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEM 603



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 6/323 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y E+I   GK  + D A++F   M+           + ++    +AG   +A+  
Sbjct: 294 PDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKL 353

Query: 206 FNRMEEYGCAPDKIAFSIVISILCR-KRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
           F  ME   C P  + ++ +I  L   K R SE  S+F+ +K     P    Y+ L+ G+C
Sbjct: 354 FEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFC 413

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +     +A  +  EM   G  P    Y  +IDAL +  +   A+++F E+ E  C  +S 
Sbjct: 414 KTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKE-NCGSSSA 472

Query: 324 TFNNLMRVHV-KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
               +M  H+ KA R +  + ++++M RLGC  +   YN L+    + G L++A+  +  
Sbjct: 473 RVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRR 532

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M   GC P+ +++N+I   ++K G  + A  M   MK    +P+ V+YN ++   + +  
Sbjct: 533 MQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGM 592

Query: 443 TDMVLKLKKEMEENEVEPNVNTY 465
            +   KL KEM     + ++ TY
Sbjct: 593 FEEAAKLMKEMNAIGFDYDLITY 615



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 143/297 (48%), Gaps = 6/297 (2%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRA-GLA 199
           RP+ V    L + MIN  GK  + D A    + M++     +V T++ +++    +    
Sbjct: 328 RPDTV----LMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRV 383

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
           +E    F RM+  G +P    +SI+I   C+  R  +A    + + +K F P    Y +L
Sbjct: 384 SEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSL 443

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           +    +A     A  +F+E+K      +   Y+++I  L + G++  A D+F EM  +GC
Sbjct: 444 IDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGC 503

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
            PN   +N LM    +A   ++ L    +M+  GC  D  +YN +++   K G  + A+ 
Sbjct: 504 TPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMG 563

Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
           +L +M +    P+A ++N +   +S  G    A ++  +M  +  + + +TY+ +++
Sbjct: 564 MLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILE 620



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 1/237 (0%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
           + + MK   +  +  T+SIL+  + +     +A+     M+E G  P   A+  +I  L 
Sbjct: 389 WFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 448

Query: 230 RKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           + +R   A   F  LK+        VY  +++   +AG + +A  +F EM   G  PNVY
Sbjct: 449 KAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVY 508

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
            Y+ ++  L R G +  A      M + GC P+  ++N ++    K    ++ + +   M
Sbjct: 509 AYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNM 568

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
           K+   + D ++YN ++      G  E+A K++  M   G + +  T++ I   I K+
Sbjct: 569 KQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKV 625



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 1/157 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S  +Y  MI   GK  + D A    D M        V  ++ L+    RAG+  EA+   
Sbjct: 471 SARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTM 530

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
            RM+++GC PD  +++I+++ L +      A     ++K    +PD + Y  ++     A
Sbjct: 531 RRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHA 590

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           G   EA ++ +EM   G   ++ TYS +++A+ +  Q
Sbjct: 591 GMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVDQ 627


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 180/383 (46%), Gaps = 2/383 (0%)

Query: 148 PDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
           PD  + +++   K  ++  A+ F  +M SRN   +    ++LV    + G   EA   + 
Sbjct: 395 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 454

Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAG 266
           R+ E G    K+  + +I  LC   +  EA      + ++  P D I Y  L+ G+C  G
Sbjct: 455 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 514

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
            +    R+  EM   GIQP++YTY+ ++  LC  G++  A  ++ E    G   N  T+ 
Sbjct: 515 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 574

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            +M  + KA+R E V  ++N++     E ++I YN +I  HC++G +  A+++L +M  K
Sbjct: 575 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 634

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  PN +T++ +   +  +G V  A  +  +M+     PN V Y  L+  +      D  
Sbjct: 635 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 694

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
                EM    + PN  TY ++I  YC +G+   A   + +M +E  + P    Y ++  
Sbjct: 695 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKM-KESGIVPDVVTYNVLTN 753

Query: 507 QLRRAGQLQKHEELVEKMVDRGF 529
              +A  +    ++ ++M   G 
Sbjct: 754 GFCKANDMDNAFKVCDQMATEGL 776



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 6/379 (1%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +++ +I+   K+   + A    D+M S+N+  T  T   L++ + ++     A +A   +
Sbjct: 327 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 386

Query: 210 EEYGCA--PDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAG 266
              G +  PD   +S+V   LC+K R   A  F    L   F P  ++ T LV G C+ G
Sbjct: 387 LSSGLSIHPDN-CYSVV-HWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 444

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              EA  ++  +   G   +  T + +I  LC  G++  A  +  EMLE G   + IT+N
Sbjct: 445 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 504

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+       + E   ++  +M + G + D  TYNFL+   C  GKL+DAIK+ +     
Sbjct: 505 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 564

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   N  T+ ++     K   +     ++ ++   K E N++ YNI+++    + +    
Sbjct: 565 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 624

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L+L + M+   + PN  TY  LI   C +G   +A   I EM +E    P    Y  ++ 
Sbjct: 625 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG-FVPNVVCYTALIG 683

Query: 507 QLRRAGQLQKHEELVEKMV 525
              + GQ+   E    +M+
Sbjct: 684 GYCKLGQMDTAESTWLEMI 702



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 141/321 (43%), Gaps = 36/321 (11%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T + L+     AG   EA      M E G   D+I ++ +I   C + +        + +
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            K   +PD+  Y  L+RG C  G + +A +++ E K +G+  N++TY I+++  C+  +I
Sbjct: 527 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 586

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++F E+L    E NSI +N +++ H +       LQ+   MK  G   +  TY+ L
Sbjct: 587 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKG-----------------------------------C 388
           I   C  G +EDA  +++ M ++G                                    
Sbjct: 647 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 706

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
           +PN  T+ ++     KLG++  A+ +  KMK+    P+ VTYN+L   F  +   D   K
Sbjct: 707 HPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 766

Query: 449 LKKEMEENEVEPNVNTYRILI 469
           +  +M    +  +  TY  L+
Sbjct: 767 VCDQMATEGLPVDEITYTTLV 787



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/381 (20%), Positives = 159/381 (41%), Gaps = 37/381 (9%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA----- 237
           V +F+ ++    + G    A+  F +ME+ G +P+ + ++ +I+ LC+  R   A     
Sbjct: 220 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 279

Query: 238 -----------------------QSFFDS--------LKDKFEPDVIVYTNLVRGWCRAG 266
                                   +FFD         +   F P+V+V+ NL+ G+C+ G
Sbjct: 280 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMG 339

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
           NI  A ++   M    I P   T   ++   C+  QI  A +   E+L  G   +     
Sbjct: 340 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY 399

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
           +++    K  R     +    M         +    L+   CKDGK  +A ++   ++ K
Sbjct: 400 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 459

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G   +  T N +   +   G +  A R+  +M +     + +TYN L+  F      +  
Sbjct: 460 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 519

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
            +L++EM +  ++P++ TY  L+   C +G  ++A K   E  +   L      Y ++++
Sbjct: 520 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF-KASGLISNIHTYGIMME 578

Query: 507 QLRRAGQLQKHEELVEKMVDR 527
              +A +++  E L  +++ +
Sbjct: 579 GYCKANRIEDVENLFNELLSK 599



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 150/331 (45%), Gaps = 7/331 (2%)

Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
           AV  F  +   G  P     +  +S L +     +    F  + +   PDV  +TN++  
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINA 229

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
            C+ G +  A  +F +M+  GI PNV TY+ +I+ LC+ G++  A ++  +M   G +PN
Sbjct: 230 LCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 289

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
             T+  L+   +K +  +KV  + ++M   G   + + +N LID +CK G +E A+K+ +
Sbjct: 290 LKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 349

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM--KDLKCEPNTVTYNILMQMFAT 439
            M+ K   P + T   + +   K   +  A     ++    L   P+   Y+++  +   
Sbjct: 350 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC-YSVVHWLCKK 408

Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
            +      +  K M      P+     +L+   C  G    A +    ++E+    P S 
Sbjct: 409 FRYHS-AFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG--SPASK 465

Query: 500 VYE-MVLQQLRRAGQLQKHEELVEKMVDRGF 529
           V    ++  L  AG+L +   +V++M++RG 
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGL 496



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           +  FV +   Y  +I    K+ Q D A      M S N+     T+++++  Y + G   
Sbjct: 668 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 727

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP-DVIVYTNLV 259
           +A +   +M+E G  PD + ++++ +  C+      A    D +  +  P D I YT LV
Sbjct: 728 KANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787

Query: 260 RGW 262
            GW
Sbjct: 788 HGW 790


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 187/369 (50%), Gaps = 6/369 (1%)

Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
           D+ + + ++++ R +E T+ +F+I++    + G   +A      M+  G + + I ++ +
Sbjct: 146 DMEFVYKEMIRRR-IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTL 204

Query: 225 ISILCRKRRASE---AQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           I   C+  +  +   A +    ++ D   P+ + +  L+ G+C+  N+S A +VF EM  
Sbjct: 205 IDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR 264

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            G++PNV TY+ +I+ LC  G++  A  +  +M+    +PN IT N L+    K    ++
Sbjct: 265 QGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQ 324

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
             ++++ M + G   +  TYN LID +CKD  +EDA  +   M+ KG  P+ ST+N +  
Sbjct: 325 AGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIA 384

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + GD+  A  +  +M     + + +TYNIL+            L+L  EM    ++P
Sbjct: 385 GLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +  TY  +I  YC  G+   A   +R  +E+       + Y ++++   +  +L+    L
Sbjct: 445 SQLTYNTMIDGYCKEGNLRAALN-LRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGL 503

Query: 521 VEKMVDRGF 529
           + +M+++G 
Sbjct: 504 LNEMLEKGL 512



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 169/358 (47%), Gaps = 8/358 (2%)

Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
           I VD   ILV  Y +         AF R  +YG      + + ++S L +     + +  
Sbjct: 94  IIVD---ILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFV 150

Query: 241 F-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
           + + ++ + EP +I +  ++ G C+ G +++A  +  +MK+ G+  NV TY+ +ID  C+
Sbjct: 151 YKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCK 210

Query: 300 CGQIT---RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
            G+I    +A  +  EM   G  PN +TFN L+    K       ++V+ +M R G + +
Sbjct: 211 MGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            +TYN LI+  C +GK+ +A  + + MV     PN  T N +     K   V  A  ++ 
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
            M      PN  TYNIL+  +   ++ +    L + M    V P+V+TY  LI   C  G
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
               A   + EM + K LK     Y +++  L   G+++K   L+++M  +G     L
Sbjct: 391 DLEAARNLVSEM-DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQL 447



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 158/311 (50%), Gaps = 1/311 (0%)

Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
           GK+ +   A   +  M++  +     TF+IL+  + +    + A+  F  M   G  P+ 
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271

Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
           + ++ +I+ LC   + +EA +  D + +   +P++I +  L+ G+C+   + +A  +F +
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331

Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
           M   GI PNV TY+I+IDA C+   +  A  ++  ML  G  P+  T+N L+    +   
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
            E    + ++M     +AD ITYN LID  C  G+++ A+++L+ M RKG  P+  T+N 
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           +     K G++  A  +  +M+ +    N  TYN+L++ F      +    L  EM E  
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511

Query: 458 VEPNVNTYRIL 468
           + PN  TY I+
Sbjct: 512 LIPNRMTYEIV 522



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 139/329 (42%), Gaps = 43/329 (13%)

Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE--AERVFREMKMAGIQPNVYTYSIV 293
           + Q       D F  + I+   LV  W  A N+        F+     G++ +V + + +
Sbjct: 77  QTQILLSVSGDSFCANSIIVDILV--WAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134

Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
           +  L + G+I     V+ EM+    EP  I+FN ++    K  +  K   +   MK  G 
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194

Query: 354 EADTITYNFLIDCHCKDGKL-----EDAI------------------------------- 377
            A+ ITYN LID +CK GK+      DAI                               
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSA 254

Query: 378 --KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ 435
             KV   M R+G  PN  T+N +   +   G VN A  +  +M +   +PN +T+N L+ 
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314

Query: 436 MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK 495
            F  +K      +L  +M +  + PNV TY ILI  YC   +  +A+   R M+  K + 
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML-GKGVC 373

Query: 496 PGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           P  S Y  ++  L R G L+    LV +M
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEM 402



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 7/237 (2%)

Query: 136 NWVTA-RPEFVHS---PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           N  TA R + V+S   P++  ++ ++N   K +    A    D M  + +   V T++IL
Sbjct: 288 NEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNIL 347

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-F 248
           +  Y +     +A   +  M   G  PD   ++ +I+ LCRK     A++    +  K  
Sbjct: 348 IDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHL 407

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           + D+I Y  L+   C  G + +A R+  EM   G++P+  TY+ +ID  C+ G +  A +
Sbjct: 408 KADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALN 467

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           + ++M +VG   N  T+N L++   K  + E    + N+M   G   + +TY  + +
Sbjct: 468 LRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 194/437 (44%), Gaps = 47/437 (10%)

Query: 136 NWVTARPEFVHSPDL---------YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
            WV    +FV   D          Y+ +I+    +   + A   + LM  R +     T 
Sbjct: 232 GWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTL 291

Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEY-GCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           ++L++ Y R     EA      ME   G   D+ A+ ++I   CR  +  +A    D + 
Sbjct: 292 TLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEML 351

Query: 246 D-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
           +     ++ +   L+ G+C+ G +SEAER+   M    ++P  Y+YS ++D  CR G +T
Sbjct: 352 NVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVT 411

Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
           +A  V+ EML VG + N +T N+L++   +    E  L V++ M + G   D ++Y  L+
Sbjct: 412 KAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLL 471

Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
           D   K G+   A+ + N ++ +G   +   FN +     K+  +  A   + +MK+L  E
Sbjct: 472 DLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFE 531

Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-------------------------- 458
           P+ VTY  L+  +    + +   K+K++ME+  +                          
Sbjct: 532 PDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDL 591

Query: 459 ---------EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
                     PNV TY  LI  +C  G  + A+    +MI EK   P   +   ++  L 
Sbjct: 592 LSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMI-EKGFAPNVIICSKIVSSLY 650

Query: 510 RAGQLQKHEELVEKMVD 526
           R G++ +   L++KMV+
Sbjct: 651 RLGRIDEANMLLQKMVN 667



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 182/398 (45%), Gaps = 3/398 (0%)

Query: 128 LLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
             + L+ +N + AR  +  S   ++ MIN   K+ +   A    + MK    E    T+ 
Sbjct: 480 FFRALALWNDILARG-YGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYR 538

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
            L+  Y + G   EA     +ME+    P    ++ +I  L + ++  E       +  K
Sbjct: 539 TLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLK 598

Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
              P+V+ Y  L+ GWC  G + +A   + +M   G  PNV   S ++ +L R G+I  A
Sbjct: 599 GLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEA 658

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
           + +  +M+ +    +   F+ L +       ++K+    ++  +     +++ YN  I  
Sbjct: 659 NMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAG 718

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            CK GK++DA K+ +S++ +G +P+  T+  +    S  G+VN A  +  +M      PN
Sbjct: 719 LCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPN 778

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            +TYN L+     S + D   KL  ++    + PNV +Y ILI  YC  G+   A     
Sbjct: 779 IITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRN 838

Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +M++E  + P    Y  ++    + G + K   L+++M
Sbjct: 839 KMLKEG-ISPSLITYSALIYGFCKQGDMGKATNLLDEM 875



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 167/347 (48%), Gaps = 3/347 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            F ++++ Y   G+   A+H F+ M + GC P   + + ++S L RK  +S A   +D +
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +    PDV   + +V  +C+ G ++ A    +EM   G + NV TY+ +ID     G +
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDM 269

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL-GCEADTITYNF 362
            RA  V   M E G   N +T   L++ + +  + E+  +V  +M+R  G   D   Y  
Sbjct: 270 ERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGV 329

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LID +C+  K++DA+++ + M+  G   N    N +     K G V+ A R+  +M D  
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
            EP + +Y+ LM  F         + +  EM    ++ NV T+  L+   C +G + +A 
Sbjct: 390 LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            ++  ++ ++ + P    Y  +L  L + G+  +   L   ++ RG+
Sbjct: 450 -HVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGY 495



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 154/343 (44%), Gaps = 36/343 (10%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           S +LY+ +I    K ++       +  M  + +   V T+  L+  +   G   +A  A+
Sbjct: 568 SIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAY 627

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEA---------------QSFFDSL------- 244
             M E G AP+ I  S ++S L R  R  EA                 +FD L       
Sbjct: 628 FDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGN 687

Query: 245 ------KDKFE--------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY 290
                  D  +        P+ +VY   + G C++G + +A+++F  + + G  P+ +TY
Sbjct: 688 LDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTY 747

Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
             +I      G +  A  +  EML+ G  PN IT+N L+    K+   ++  ++++++  
Sbjct: 748 CTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHL 807

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G   + I+YN LID +CK+G   +A+ + N M+++G +P+  T++ +     K GD+  
Sbjct: 808 KGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGK 867

Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           A  +  +M++L  + N   +  L++          + KL   M
Sbjct: 868 ATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/486 (20%), Positives = 191/486 (39%), Gaps = 107/486 (22%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   +V + D A    D M +  + + +   + L+  Y + G  +EA     RM 
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
           ++   P+  ++S ++   CR+   ++A S ++  L+   + +V+ + +L++G CR G   
Sbjct: 387 DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446

Query: 270 EAERVFREMKMAGIQPN-----------------------------------VYTYSIVI 294
           +A  V+  M   G+ P+                                    Y ++ +I
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506

Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSIT------------------------------ 324
           +  C+  ++  A + F  M E+G EP+ +T                              
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566

Query: 325 -----FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
                +N+L+    K+ +T +V+ + ++M   G   + +TY  LI   C +G+L+ A   
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTA 626

Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC---------------- 423
              M+ KG  PN    + I   + +LG ++ A+ +  KM +L                  
Sbjct: 627 YFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDG 686

Query: 424 -------------------EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
                               PN+V YNI +     S   D   K+   +      P+  T
Sbjct: 687 NLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFT 746

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI  Y   G+ N+A+    EM+ ++ L P    Y  ++  L ++G L + ++L +K+
Sbjct: 747 YCTLIHGYSAAGNVNDAFSLRDEML-KRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 525 VDRGFT 530
             +G  
Sbjct: 806 HLKGLA 811



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 40/372 (10%)

Query: 143 EFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
           E    PD   Y  +I+   K+   + A+   + M+   +  +++ ++ L+    ++    
Sbjct: 527 ELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTR 586

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLV 259
           E +   + M   G +P+ + +  +I+  C + R  +A  ++FD ++  F P+VI+ + +V
Sbjct: 587 EVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIV 646

Query: 260 RGWCRAGNISEAERVFREM--------------------------KMAGIQ--------- 284
               R G I EA  + ++M                          K+A            
Sbjct: 647 SSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSL 706

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           PN   Y+I I  LC+ G++  A  +F+ +L  G  P++ T+  L+  +  A        +
Sbjct: 707 PNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSL 766

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            ++M + G   + ITYN LI+  CK G L+ A K+ + +  KG  PN  ++N++     K
Sbjct: 767 RDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCK 826

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G+   A  +  KM      P+ +TY+ L+  F           L  EM E   + N+  
Sbjct: 827 NGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAK 886

Query: 465 YRILITMY--CG 474
           +  L+  +  CG
Sbjct: 887 FVKLVEGHVKCG 898



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 145/305 (47%), Gaps = 19/305 (6%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
           ++ IL R R   E +S+ + L     P    Y++LV  W      +E  RVF + K +  
Sbjct: 100 LVHILSRARMYDETRSYLNEL---VTPSKNNYSSLVV-W------NELVRVFEDFKFS-- 147

Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
            P V+   +++   C  G I  A  VF  M ++GC P+  + N L+   V+   +   + 
Sbjct: 148 -PTVF--DMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAIL 204

Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN-MIFRCI 402
           VY+ + RLG   D  T + +++ +CKDG +  A+  +  M   G   N  T+N +I  C+
Sbjct: 205 VYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCV 264

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE-VEPN 461
           S +GD+  A  +   M +     N VT  +L++ +      +   K+ +EME +E +  +
Sbjct: 265 S-IGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLD 323

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
              Y +LI  YC +   ++A +   EM+    L+    +   ++    + GQ+ + E L+
Sbjct: 324 EYAYGVLIDGYCRVCKMDDAVRLRDEMLNVG-LRMNLFICNALINGYCKNGQVSEAERLL 382

Query: 522 EKMVD 526
            +MVD
Sbjct: 383 MRMVD 387



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 22/290 (7%)

Query: 243 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
           S +  F P+V  +  LV    RA    E      E+    + P+   YS    +L    +
Sbjct: 85  SKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYS----SLVVWNE 136

Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           + R  + F        + +   F+ +++++ +    +  L V++ M +LGC     + N 
Sbjct: 137 LVRVFEDF--------KFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNR 188

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           L+    + G+  +AI V + + R G  P+  T +++     K G VN A     +M  L 
Sbjct: 189 LLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLG 248

Query: 423 CEPNTVTYNILMQ---MFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
            E N VTYN L+         +  +MVLKL   M E  +  N  T  +LI  YC      
Sbjct: 249 FELNVVTYNSLIDGCVSIGDMERAEMVLKL---MGERGILRNKVTLTLLIKGYCRQCKLE 305

Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            A K +REM   + +      Y +++    R  ++     L ++M++ G 
Sbjct: 306 EAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGL 355


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 36/382 (9%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V  ++ ++  + +A     A    +RM++ G  PD + ++I+I   C + R   A    D
Sbjct: 146 VFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMD 205

Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
            L KD  +P VI YT L+      G I EA ++  EM   G++P+ YTY++V++ +C+ G
Sbjct: 206 QLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEG 265

Query: 302 QITRAHD-----------------------------------VFAEMLEVGCEPNSITFN 326
            + RA +                                   + ++ML  GCEPN IT++
Sbjct: 266 MLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYS 325

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
            L+    +  + ++   V   MK      D  +Y+ LI   C++GK++ AI+ L+ M+  
Sbjct: 326 TLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISG 385

Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
           G  P+  ++N I   + K G+ + A  ++ K+ ++ C PN  +YN L     +S      
Sbjct: 386 GHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRA 445

Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
           L +  EM  N ++P+  TY  LI+  C  G  + A + + +M E +  +P    Y  VL 
Sbjct: 446 LGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLL 505

Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
            L +  ++    E++  MV+ G
Sbjct: 506 GLCKVQRIIDAIEVLAAMVNEG 527



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 186/384 (48%), Gaps = 7/384 (1%)

Query: 148 PDL--YHEMI-NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           PD+  Y+ +I N  G+ R  DLA   +D +   N + TV T++IL+   +  G   EA+ 
Sbjct: 179 PDVVTYNILIGNFCGRGR-LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMK 237

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWC 263
             + M   G  PD+  +++V++ +C++     A  F   + K+     V  Y  L+R   
Sbjct: 238 LLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLL 297

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
             G     E++  +M + G +PN  TYS +I ALCR G+I  A +V   M E    P+  
Sbjct: 298 NEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGY 357

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           +++ L+    +  + +  ++  + M   G   D ++YN ++   CK+G  ++A+ +   +
Sbjct: 358 SYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL 417

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC PNA ++N +F  +   GD   A  M  +M     +P+ +TYN L+         
Sbjct: 418 GEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLV 477

Query: 444 DMVLKLKKEMEENE-VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
           D  ++L  +M E+E  +P V +Y  ++   C +    +A + +  M+ E CL P  + Y 
Sbjct: 478 DQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCL-PNETTYT 536

Query: 503 MVLQQLRRAGQLQKHEELVEKMVD 526
           +++Q +  AG      EL   +V+
Sbjct: 537 LLIQGIGFAGWRYDAMELANLLVN 560



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 163/343 (47%), Gaps = 1/343 (0%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           F   + R  ++    E+++    M   G  PD I  + +I      ++  +A    + L+
Sbjct: 80  FMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILE 139

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
              +PDV  Y  ++ G+C+A  +  A +V   MK  G +P+V TY+I+I   C  G++  
Sbjct: 140 KHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDL 199

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  V  ++L+  C+P  IT+  L+   +     ++ +++ ++M   G   D  TYN +++
Sbjct: 200 ALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVN 259

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK+G L+ A + L+ + + GC    ST+N++ R +   G      ++   M    CEP
Sbjct: 260 GMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N +TY+ L+         D    + K M+E  + P+  +Y  LI+  C  G  + A +++
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
            +MI    L P    Y  +L  L + G   +   + EK+ + G
Sbjct: 380 DDMISGGHL-PDILSYNSILASLCKNGNADEALNIFEKLGEVG 421



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 2/240 (0%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           +P  Y  +I    +  + D A + + +MK + +     ++  L+    R G    A+   
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRA 265
           + M   G  PD ++++ +++ LC+   A EA + F+ L +    P+   Y  L      +
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSIT 324
           G+   A  +  EM   GI P+  TY+ +I  LCR G + +A ++  +M E   C+P  I+
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVIS 499

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    K  R    ++V   M   GC  +  TY  LI      G   DA+++ N +V
Sbjct: 500 YNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLV 559


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 213/480 (44%), Gaps = 71/480 (14%)

Query: 114 HVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY--HEMINLAGKVRQFDLAWHFI 171
           +V+ KSC   + + L+  L + + V AR     SP+ Y  + +I L       + A    
Sbjct: 116 NVLLKSCIRENRVELVSWL-YKDMVLARV----SPEAYTFNLLIGLLCDSGHLEDARELF 170

Query: 172 DLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
           D M +R  E    TF ILVR Y RAGLA++ +    +M   G  P+ + ++ +IS  C++
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKE 230

Query: 232 RRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM---AGI-QPN 286
            +  +A+   D ++ D   P V  + + +   C +G I EA R+FR+M++    G+  PN
Sbjct: 231 GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPN 290

Query: 287 VYTYSIVIDALC-----------------------------------RCGQITRAHDVFA 311
           V TY +++   C                                   R G++  A  V  
Sbjct: 291 VITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLK 350

Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
           EML +G EP+  ++N +M    K         +   M R G   DT+TY+ L+  +C  G
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKG 410

Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
           K+ +A  +L+ M+   C+PN  T N++   + K G ++ A  +  KM +     +TVT N
Sbjct: 411 KVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCN 470

Query: 432 ILMQMFATSKSTDMVLKLKKEM-----------------------EENEVEPNVNTYRIL 468
           I++     +   D  +++   M                          +  P++ TY  +
Sbjct: 471 IIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTI 530

Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           I+  C  G  ++A K   EM+  K L+P S++Y+  +    R G++    ++++ M  RG
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMM-SKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRG 589



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 169/353 (47%), Gaps = 6/353 (1%)

Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
           ++  +++L++  +R          +  M     +P+   F+++I +LC      +A+  F
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170

Query: 242 DSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
           D +  +  EP+   +  LVRG+CRAG  S+   +  +M+  GI PN   Y+ +I + C+ 
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKE 230

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK---RLGC-EAD 356
           G+   A  +  +M E G  P+  TFN+ +     + +  +  +++  M+    LG    +
Sbjct: 231 GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPN 290

Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
            ITY  ++   CK+G LE+A  ++++M R     N  ++N+    + + G +  A  +  
Sbjct: 291 VITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLK 350

Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
           +M  +  EP+  +YNI+M     +        L   M  N + P+  TY  L+  YC  G
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKG 410

Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
               A   + EMI   C  P +    ++L  L + G++ + E L++KM ++G+
Sbjct: 411 KVFEANNLLHEMISNNC-SPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 8/313 (2%)

Query: 224 VISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           ++++L +    ++A S F SL+  F   +P + +Y  L++   R   +     ++++M +
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           A + P  YT++++I  LC  G +  A ++F +M   GCEPN  TF  L+R + +A    K
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            L++  QM+ +G   + + YN LI   CK+GK  DA K+++ M   G  P+  TFN    
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRIS 260

Query: 401 CISKLGDVNGAHRMYGKMK---DLKC-EPNTVTYNILMQMFATSKSTDMVLKLKKEMEEN 456
            +   G +  A R++  M+   +L    PN +TY +++  F      +    L   M+ N
Sbjct: 261 ALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRN 320

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
               N+ +Y I +      G    A+  ++EM+    ++P    Y +V+  L + G L  
Sbjct: 321 ANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIG-IEPDIYSYNIVMDGLCKNGMLSD 379

Query: 517 HEELVEKMVDRGF 529
              L+  M+  G 
Sbjct: 380 ARMLMGLMIRNGI 392



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/459 (21%), Positives = 192/459 (41%), Gaps = 98/459 (21%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +D MK     I +++++I +   +R G   EA      M   G  PD  +++IV+  LC
Sbjct: 313 LVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLC 372

Query: 230 RKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWC------------------------- 263
           +    S+A+      +++   PD + Y+ L+ G+C                         
Sbjct: 373 KNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTY 432

Query: 264 ----------RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
                     + G ISEAE + ++M   G   +  T +I+I+ALC  GQ+ +A ++   M
Sbjct: 433 TCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGM 492

Query: 314 LEVG-----------------------CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
              G                       C P+ +T++ ++    KA R +   + + +M  
Sbjct: 493 WTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMS 552

Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
            G + D+  Y+  I   C++GK+  A +VL  M ++GCN    T+N +   I  LG  N 
Sbjct: 553 KGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSL---ILGLGSKNQ 609

Query: 411 AHRMYG---KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
              +YG   +M++    P+  TYN ++         +    +  EM +  + PN++++RI
Sbjct: 610 IFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRI 669

Query: 468 LITMYCGM-----------------GHWNNAYKYI-------------REMIE---EKCL 494
           LI  +C                   GH    Y  +             +E+ E   ++  
Sbjct: 670 LIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSF 729

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
             G+ +Y+ ++ +L +  +L+   +++ +++D+G+   P
Sbjct: 730 DIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDP 768



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 175/382 (45%), Gaps = 36/382 (9%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           M S N      T ++L+    + G  +EA +   +M E G   D +  +I+I+ LC   +
Sbjct: 422 MISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQ 481

Query: 234 ASEA-------------------QSFFDSLKD-----KFEPDVIVYTNLVRGWCRAGNIS 269
             +A                    SF   + D     K  PD++ Y+ ++ G C+AG + 
Sbjct: 482 LDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLD 541

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A++ F EM   G+QP+   Y   I + CR G+I+ A  V  +M + GC     T+N+L+
Sbjct: 542 DAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLI 601

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                 ++  ++  + ++M+  G   D  TYN +++C C+ G++ DA  VL+ M++KG +
Sbjct: 602 LGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGIS 661

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-QMFATSKSTDMVLK 448
           PN S+F ++ +   K  D   +H ++    ++ C      Y ++  ++    K  +    
Sbjct: 662 PNISSFRILIKAFCKACDFKASHEVFEIALNV-CGHKEALYTLMFNELLVGGKVAE---- 716

Query: 449 LKKEMEENEVEPNVNT----YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
             KE+ E  ++ + +     Y+ LI   C       A   +  +I +K  +   + +  V
Sbjct: 717 -AKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLI-DKGYQFDPASFMPV 774

Query: 505 LQQLRRAGQLQKHEELVEKMVD 526
           +    + G     +EL E+M++
Sbjct: 775 IDGFGKMGNKHVADELAERMME 796



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 6/284 (2%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           +PDL  Y  +I+   K  + D A   FI++M S+ ++     +   +  + R G  + A 
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMM-SKGLQPDSAIYDTFIHSFCREGKISSAF 579

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
                ME+ GC      ++ +I  L  K +  E     D +++K   PDV  Y +++   
Sbjct: 580 QVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCL 639

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C  G I++A  V  EM   GI PN+ ++ I+I A C+      +H+VF   L V C    
Sbjct: 640 CEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV-CGHKE 698

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
             +  +    +   +  +  +++        +     Y  LID  CKD KLE A  VL+ 
Sbjct: 699 ALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHR 758

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
           ++ KG   + ++F  +     K+G+ + A  +  +M ++  E N
Sbjct: 759 LIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESN 802


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 186/394 (47%), Gaps = 14/394 (3%)

Query: 139 TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVRA 196
           + RP+ V     Y  ++N   K  +   A   +D M  ++++I  D  T + +V    ++
Sbjct: 167 SVRPDVVT----YGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKS 222

Query: 197 GLAAEAVHAF--NRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
           G   EA+ AF   RM   +GC P+ + ++ +I   CR    S A    + ++++  P  I
Sbjct: 223 GRVQEAL-AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNI 281

Query: 254 VYTN-LVRGWCRAGNISEAERVFREMKMAGIQP--NVYTYSIVIDALCRCGQITRAHDVF 310
           V  N +V G CRAG    A   FRE +    +   N  TYS ++ AL     +  A ++F
Sbjct: 282 VTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            E +  G  P++I +  ++    +A R E    + + MK  G + DT  YN LI   C+ 
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
            +L +A ++L  M   G  P+  T+N +     K GD      + GKM D  C+P+ +T+
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
             L+  +      D  L++ + M+E+ + PN   Y  LI   C  G  + A +   EM +
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM-K 520

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           EK +    + +  +L+ LR     +K  EL+++M
Sbjct: 521 EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 4/274 (1%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S LV   +       A+  F+     G +PD I +  +IS L +  R  +A S   S+
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           K+  F+ D   Y  L+ G+CR   + EA  + +EMK  GI+P+V TY+ ++   C+ G  
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  +M++ GC+P+ ITF  L+  + K  + ++ L++   M   G   + + YN L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK G ++ AI++ + M  K    N +TFN + + +        A  +  +M++ +C
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
            P+ VT ++LM+       TD   +LK+ M++ E
Sbjct: 560 FPDYVTVDVLMEWLPVIGETD---RLKRFMQQGE 590



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 165/342 (48%), Gaps = 7/342 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   +V    +A+  ++ M++  V   + T + +V    RAG    A+  F   E
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--E 306

Query: 211 EYGCAPD----KIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRA 265
           +    P+     + +S ++  L        A   F + + +   PD I+Y  ++ G  +A
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + +A  +   MK AG + +   Y+I+I   CR  ++  A+++  EM EVG  P+  T+
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+    KA     V ++  +M   GC+   IT+  L+  +CK GK+++A+++L SM  
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G +PN   +N +   + K GDV+ A  ++ +MK+     N  T+N L++        + 
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
             +L  +M E    P+  T  +L+     +G  +   +++++
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 9/320 (2%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           D  AF+ +++ L R R        +  ++      PDV+ Y  LV G C+AG + +A RV
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 275 FREMKMAG--IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV--GCEPNSITFNNLMR 330
              M      I+P+V T + V+D LC+ G++  A     + +    GC PN++T+N L+ 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS--MVRKGC 388
              +        ++  +M+  G   + +T N ++   C+ G+   A++       V    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             NA T++ +   +    +V  A  ++ +       P+ + Y  ++     +   +    
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +   M+E   + +   Y ILI  +C     + AY+ ++EM +E  ++P    Y  +L   
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLSGS 433

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            +AG     +EL+ KM+D G
Sbjct: 434 CKAGDFAAVDELLGKMIDDG 453



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 18/256 (7%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC---EPNSITFNNLMRVHVKASRTEKVL 342
           +V+ ++ ++ AL R   +     ++A M   GC    P+ +T+  L+    KA R    L
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALM--QGCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 343 QVYNQMKR--LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--GCNPNASTFNMI 398
           +V + M R  L    D +T N ++D  CK G++++A+  +   +    GC PN  T+N +
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE--N 456
                ++G+++ A+ +  KM++     N VT N ++     +  T   L+  +E      
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK---PGSSVYEMVLQQLRRAGQ 513
           E + N  TY  L+     + H NN    + E+  EK  +   P + +Y  ++  L +AG+
Sbjct: 313 EGKGNAVTYSTLVG---ALLHTNNVGMAM-ELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 514 LQKHEELVEKMVDRGF 529
           L+    +   M + GF
Sbjct: 369 LEDACSMASSMKEAGF 384



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 38/79 (48%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+   K    DLA    D MK ++V   V TF+ L++      +  +A    ++M
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554

Query: 210 EEYGCAPDKIAFSIVISIL 228
            E  C PD +   +++  L
Sbjct: 555 REERCFPDYVTVDVLMEWL 573


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 176/389 (45%), Gaps = 11/389 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVRAGLAAEAVHAFNRMEE 211
           ++N   KVR+F   W   D  +S N  +  D  T S +VR          A      ME 
Sbjct: 196 LLNGLLKVRKFITVWELFD--ESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEA 253

Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISE 270
            G     + ++++I  LC+  R SEA     SL  K    DV+ Y  LV G+CR      
Sbjct: 254 NGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEA 313

Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
             ++  EM   G  P     S ++D L + G+I  A+++  ++   G  PN   +N L+ 
Sbjct: 314 GIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALIN 373

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
              K    +K   +Y+ M  +    + ITY+ LID  C+ G+L+ AI   + M++ G   
Sbjct: 374 SLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGE 433

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
               +N +     K GD++ A  ++ +M +   EP   T+  L+  +          KL 
Sbjct: 434 TVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLY 493

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
            +M +N + PNV T+  LI+  C       A +   E++E K +KP    Y ++++   R
Sbjct: 494 NKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK-IKPTEVTYNVLIEGYCR 552

Query: 511 AGQLQKHEELVEKMVDRG-----FTARPL 534
            G++ K  EL+E M  +G     +T RPL
Sbjct: 553 DGKIDKAFELLEDMHQKGLVPDTYTYRPL 581



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 175/414 (42%), Gaps = 36/414 (8%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN   K      A      M ++ VE T  TF+ L+  Y +     +A   +N+M 
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   F+ +IS LC   + +EA   FD L + K +P  + Y  L+ G+CR G I 
Sbjct: 498 DNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKID 557

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A  +  +M   G+ P+ YTY  +I  LC  G++++A D   ++ +   + N + ++ L+
Sbjct: 558 KAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALL 617

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
             + +  R  + L    +M + G   D + +  LID   K    +    +L  M  +G  
Sbjct: 618 HGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLR 677

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+   +  +    SK G    A   +  M   +C PN VTY  LM     +   D    L
Sbjct: 678 PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLL 737

Query: 450 KKEMEENEVEPNVNTY----------------------------------RILITMYCGM 475
            K M+   V PN  TY                                   I+I  +C +
Sbjct: 738 FKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKL 797

Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           G ++ A K + EM E     P    Y  ++ +  R+G +    +L + M++RG 
Sbjct: 798 GRFHEATKVLSEMTENGIF-PDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGL 850



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 169/356 (47%), Gaps = 2/356 (0%)

Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
           +  + +   V T+  LV  + R       +   + M E G +P + A S ++  L ++ +
Sbjct: 286 LGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGK 345

Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
             +A      + +  F P++ VY  L+   C+ G++ +AE ++  M +  ++PN  TYSI
Sbjct: 346 IDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSI 405

Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
           +ID+ CR G++  A   F  M++ G       +N+L+    K         ++ +M   G
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465

Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
            E    T+  LI  +CKD +++ A K+ N M+  G  PN  TF  +   +     +  A 
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
            ++ ++ + K +P  VTYN+L++ +      D   +L ++M +  + P+  TYR LI+  
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585

Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           C  G  + A  +I ++ ++  +K     Y  +L    + G+L +      +M+ RG
Sbjct: 586 CSTGRVSKAKDFIDDLHKQN-VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 171/376 (45%), Gaps = 37/376 (9%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            ++ L+    + G   +A   ++ M      P+ I +SI+I   CR  R   A S+FD +
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426

Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
            +D     V  Y +L+ G C+ G++S AE +F EM   G++P   T++ +I   C+  Q+
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
            +A  ++ +M++ G  PN  TF  L+      ++  +  ++++++     +   +TYN L
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVL 546

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I+ +C+DGK++ A ++L  M +KG  P+  T+  +   +   G V+ A      +     
Sbjct: 547 IEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNV 606

Query: 424 EPNTVTYNILMQ--------MFATSKSTDMV---------------------------LK 448
           + N + Y+ L+         M A S S +M+                             
Sbjct: 607 KLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFD 666

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           L K+M +  + P+   Y  +I  Y   G +  A++    M+ E+C  P    Y  ++  L
Sbjct: 667 LLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECF-PNVVTYTALMNGL 725

Query: 509 RRAGQLQKHEELVEKM 524
            +AG++ +   L ++M
Sbjct: 726 CKAGEMDRAGLLFKRM 741



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 150/299 (50%), Gaps = 8/299 (2%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A  FID +  +NV++    +S L+  Y + G   EA+ A   M + G   D +  +++I 
Sbjct: 594 AKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLID 653

Query: 227 ILCRKRRASEAQSFFDSLKD----KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
                 +  + ++FFD LKD       PD ++YT+++  + + G+  +A   +  M    
Sbjct: 654 ---GALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEE 710

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
             PNV TY+ +++ LC+ G++ RA  +F  M      PNSIT+   +    K    ++ +
Sbjct: 711 CFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAI 770

Query: 343 QVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCI 402
            +++ M + G  A+T+T+N +I   CK G+  +A KVL+ M   G  P+  T++ +    
Sbjct: 771 GLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEY 829

Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
            + G+V  + +++  M +   EP+ V YN+L+     +   D   +L+ +M    + P+
Sbjct: 830 CRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 173/378 (45%), Gaps = 43/378 (11%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A    D +  R ++ T  T+++L+  Y R G   +A      M + G  PD   +  +IS
Sbjct: 524 ASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLIS 583

Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEA--------ER---- 273
            LC   R S+A+ F D L K   + + + Y+ L+ G+C+ G + EA        +R    
Sbjct: 584 GLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINM 643

Query: 274 -----------------------VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
                                  + ++M   G++P+   Y+ +ID   + G   +A + +
Sbjct: 644 DLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECW 703

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
             M+   C PN +T+  LM    KA   ++   ++ +M+      ++ITY   +D   K+
Sbjct: 704 DLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKE 763

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G +++AI + ++M+ KG   N  T N+I R   KLG  + A ++  +M +    P+ VTY
Sbjct: 764 GNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTY 822

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI- 489
           + L+  +  S +    +KL   M    +EP++  Y +LI   C  G  + A++   +M+ 
Sbjct: 823 STLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLR 882

Query: 490 -----EEKCLKPGSSVYE 502
                + K L+   +++E
Sbjct: 883 RGIIPDNKYLQKKGTIFE 900



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 105/473 (22%), Positives = 183/473 (38%), Gaps = 58/473 (12%)

Query: 93  SLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYH 152
           S  + F+  S + ++ P  V  V+  +            L FFN++       HS   Y 
Sbjct: 53  SWKVAFNDASISSTLRPHHVEQVLMNTLDDAK-----LALRFFNFLGLHKNMNHSTTSYA 107

Query: 153 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
            M++     R F  A   +  +  R        FS  +  Y R   ++     FN + + 
Sbjct: 108 IMVHALVHSRLFWPANSLLHTLLLRESHPKC-VFSHFLDSYKRCKFSSTL--GFNLLVQN 164

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
                +I  ++VI  L                 +   P+V   + L+ G  +        
Sbjct: 165 YVLSSRIFDAVVIVKL--------------MFANNLLPEVRTLSALLNGLLKVRKFITVW 210

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +F E   AG++P+ YT S V+ ++C      RA +    M   G + + +T+N L+   
Sbjct: 211 ELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGL 270

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC------------------------ 368
            K  R  + ++V   +   G  AD +TY  L+   C                        
Sbjct: 271 CKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTE 330

Query: 369 -----------KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
                      K GK++DA +++  + R G  PN   +N +   + K GD++ A  +Y  
Sbjct: 331 AAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSN 390

Query: 418 MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGH 477
           M  +   PN +TY+IL+  F  S   D+ +     M ++ +   V  Y  LI   C  G 
Sbjct: 391 MSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGD 450

Query: 478 WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            + A     EM   K ++P ++ +  ++    +  Q+QK  +L  KM+D G T
Sbjct: 451 LSAAESLFIEMT-NKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGIT 502



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 2/222 (0%)

Query: 133 SFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
           +FF+ +    +    PD  +Y  MI+   K   F  A+   DLM +      V T++ L+
Sbjct: 663 TFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALM 722

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
               +AG    A   F RM+     P+ I +   +  L ++    EA     ++      
Sbjct: 723 NGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLA 782

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           + + +  ++RG+C+ G   EA +V  EM   GI P+  TYS +I   CR G +  +  ++
Sbjct: 783 NTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLW 842

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
             ML  G EP+ + +N L+         +K  ++ + M R G
Sbjct: 843 DTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG 884


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 40/366 (10%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-L 244
            S LV     A L   +    ++  E+GC  +  A++ ++S L  + R  +  + F+  +
Sbjct: 181 LSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWI 240

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           +D+ + PDV  +  +++G CR G + +A  +   M   G  P+  T++I++D LCR  ++
Sbjct: 241 QDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEV 300

Query: 304 TRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
           +R H+V   +   G C PN +TF +++  + KA + E  + VYN M   G   +T+TYN 
Sbjct: 301 SRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNV 360

Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
           LI+ + K G L  A++V   M R  C P+  TF+ +     + G ++ A R++  M   +
Sbjct: 361 LINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHR 420

Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKL--------------------------------- 449
            +PN  T++I++        +D  ++L                                 
Sbjct: 421 IQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA 480

Query: 450 ---KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
              +K MEE    P+  TY ILI  YC     + A  +  EM+E  C  P S      + 
Sbjct: 481 NLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGC-SPDSITVNCFIS 539

Query: 507 QLRRAG 512
            L +AG
Sbjct: 540 CLLKAG 545



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 169/336 (50%), Gaps = 3/336 (0%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           M +L G+ R  D+   F   ++ R     V +F+++++   R G   +A+    RM E+G
Sbjct: 220 MSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFG 279

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEA 271
           C+PD +  +I++  LCR    S        L+      P+V+ +T+++ G+C+AG + +A
Sbjct: 280 CSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDA 339

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
             V+ +M  +GI PN  TY+++I+   + G +  A +V+ +M  + C P+ +TF++L+  
Sbjct: 340 MAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDG 399

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM-VRKGCNP 390
           + +  + +  L++++ M +   + +  T++ +I   CK  + ++AI++LN + +R    P
Sbjct: 400 YCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAP 459

Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
            A  +N +   + K G V+ A+ +   M++  C P+  TY IL+  +         +   
Sbjct: 460 QAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFF 519

Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            EM E    P+  T    I+     G  N     +R
Sbjct: 520 HEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 555



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 176/339 (51%), Gaps = 6/339 (1%)

Query: 195 RAGLAAEAVHAFNRME-EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF--EPD 251
           R+G  A+A+  F++M   YG +PD    S ++S  C      +A +   S   +F    +
Sbjct: 154 RSGRQADALQLFDQMTTHYGYSPDARFLSFLVSS-CTCANLLDASATLLSKASEFGCRVE 212

Query: 252 VIVYTNLVRGWCRAGNISEAERVF-REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
              Y  L+      G + +   +F R ++     P+V+++++VI  +CR GQ+ +A ++ 
Sbjct: 213 AYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELV 272

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG-CEADTITYNFLIDCHCK 369
             M E GC P+++T N ++    + +   +  +V  +++R G C  + +T+  +I  +CK
Sbjct: 273 ERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCK 332

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
            GKLEDA+ V N MV  G  PN  T+N++     K+GD+  A  +Y +M  L+C P+ VT
Sbjct: 333 AGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVT 392

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           ++ L+  +      D  L++  +M ++ ++PNV T+ I+I   C     + A + + E+ 
Sbjct: 393 FSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELN 452

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
               + P + +Y  V+  L + G++ +   + + M ++G
Sbjct: 453 LRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 491



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 2/196 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +IN  GKV     A      M        V TFS L+  Y R G   +A+  ++ M 
Sbjct: 358 YNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMA 417

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFD--SLKDKFEPDVIVYTNLVRGWCRAGNI 268
           ++   P+   FSI+I  LC++ R+ EA    +  +L+    P   +Y  ++   C+ G +
Sbjct: 418 QHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKV 477

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  + + M+  G +P+ YTY+I+I   C   +I+ A   F EM+E GC P+SIT N  
Sbjct: 478 DEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCF 537

Query: 329 MRVHVKASRTEKVLQV 344
           +   +KA    +V  V
Sbjct: 538 ISCLLKAGMPNEVDHV 553


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 167/322 (51%), Gaps = 4/322 (1%)

Query: 147 SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           SP +Y+ +I+   K          +D M  +       T++ L+      G   +AV   
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
            RM    C P+ + +  +I+ L ++RRA++A     S++++ +  +  +Y+ L+ G  + 
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G   EA  ++R+M   G +PN+  YS+++D LCR G+   A ++   M+  GC PN+ T+
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           ++LM+   K    E+ +QV+ +M + GC  +   Y+ LID  C  G++++A+ V + M+ 
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM---KDLKCEPNTVTYNILMQMFATSKS 442
            G  P+   ++ I + +  +G ++ A ++Y +M   ++ K +P+ VTYNIL+      K 
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555

Query: 443 TDMVLKLKKEMEENEVEPNVNT 464
               + L   M +   +P+V T
Sbjct: 556 ISRAVDLLNSMLDRGCDPDVIT 577



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 6/364 (1%)

Query: 167 AWHFIDLMKSRNVEITVD----TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
              F D + + N+ + +     +F+++++   +      A+  F  M E  C PD   + 
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC 226

Query: 223 IVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
            ++  LC++ R  EA    D ++ +   P  ++Y  L+ G C+ G+++   ++   M + 
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286

Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
           G  PN  TY+ +I  LC  G++ +A  +   M+   C PN +T+  L+   VK  R    
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346

Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
           +++ + M+  G   +   Y+ LI    K+GK E+A+ +   M  KGC PN   ++++   
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406

Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
           + + G  N A  +  +M    C PN  TY+ LM+ F  +   +  +++ KEM++     N
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466

Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
              Y +LI   CG+G    A     +M+    +KP +  Y  +++ L   G +    +L 
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG-IKPDTVAYSSIIKGLCGIGSMDAALKLY 525

Query: 522 EKMV 525
            +M+
Sbjct: 526 HEML 529



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 171/376 (45%), Gaps = 32/376 (8%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM-EEY 212
           MI        FD     +  ++  N  I   +F ++ R Y +A L  +AV  F+RM +E+
Sbjct: 83  MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
            C     +F+ V++++  +        F+D          +V +N               
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYD---------YVVNSN--------------- 178

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
                M M  I PN  ++++VI ALC+   + RA +VF  M E  C P+  T+  LM   
Sbjct: 179 -----MNM-NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            K  R ++ + + ++M+  GC    + YN LID  CK G L    K++++M  KGC PN 
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            T+N +   +   G ++ A  +  +M   KC PN VTY  L+      +     ++L   
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352

Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
           MEE     N + Y +LI+     G    A    R+M E+ C KP   VY +++  L R G
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC-KPNIVVYSVLVDGLCREG 411

Query: 513 QLQKHEELVEKMVDRG 528
           +  + +E++ +M+  G
Sbjct: 412 KPNEAKEILNRMIASG 427



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 18/231 (7%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS- 243
           T+S L++ + + GL  EAV  +  M++ GC+ +K  +S++I  LC   R  EA   +   
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM---KMAGIQPNVYTYSIVIDALCRC 300
           L    +PD + Y+++++G C  G++  A +++ EM   +    QP+V TY+I++D LC  
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
             I+RA D+   ML+ GC+P+ IT N  +    + S +              C+      
Sbjct: 554 KDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS--------------CDKGRSFL 599

Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
             L+    K  ++  A  ++  M+ K   P  ST+ MI R I K   +N A
Sbjct: 600 EELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 192/401 (47%), Gaps = 9/401 (2%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + + +F W   R E  H P+ Y+ ++ +  + R FD     +  M       +V+T   +
Sbjct: 80  RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEM 139

Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KF 248
           V   V+A    E       M ++   P   A++ +I        +    + F  +++  +
Sbjct: 140 VLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
           EP V ++T L+RG+ + G +  A  +  EMK + +  ++  Y++ ID+  + G++  A  
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM---KRLGCEADTITYNFLID 365
            F E+   G +P+ +T+ +++ V  KA+R ++ ++++  +   +R+ C   T  YN +I 
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC---TYAYNTMIM 316

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
            +   GK ++A  +L     KG  P+   +N I  C+ K+G V+ A +++ +MK     P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAP 375

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           N  TYNIL+ M   +   D   +L+  M++  + PNV T  I++   C     + A    
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
            EM  + C  P    +  ++  L + G++    ++ EKM+D
Sbjct: 436 EEMDYKVC-TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 174/374 (46%), Gaps = 3/374 (0%)

Query: 151 YHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           Y  MI +  K  + D A   F  L K+R V  T   ++ ++  Y  AG   EA     R 
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              G  P  IA++ +++ L +  +  EA   F+ +K    P++  Y  L+   CRAG + 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLD 394

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
            A  +   M+ AG+ PNV T +I++D LC+  ++  A  +F EM    C P+ ITF +L+
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R +   +VY +M    C  ++I Y  LI      G+ ED  K+   M+ + C+
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P+    N    C+ K G+      M+ ++K  +  P+  +Y+IL+     +   +   +L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M+E     +   Y I+I  +C  G  N AY+ + EM + K  +P    Y  V+  L 
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLA 633

Query: 510 RAGQLQKHEELVEK 523
           +  +L +   L E+
Sbjct: 634 KIDRLDEAYMLFEE 647



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 183/388 (47%), Gaps = 4/388 (1%)

Query: 145 VHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           V +PD   +  +I+  GKV + D A+   + M   +       ++ L++ +   G   + 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG 261
              +  M    C+PD    +  +  + +     + ++ F+ +K + F PD   Y+ L+ G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561

Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
             +AG  +E   +F  MK  G   +   Y+IVID  C+CG++ +A+ +  EM   G EP 
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
            +T+ +++    K  R ++   ++ + K    E + + Y+ LID   K G++++A  +L 
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
            +++KG  PN  T+N +   + K  ++N A   +  MK+LKC PN VTY IL+      +
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
             +      +EM++  ++P+  +Y  +I+     G+   A   + +  +     P S+ Y
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA-GALFDRFKANGGVPDSACY 800

Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +++ L    +      L E+   RG 
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 190/416 (45%), Gaps = 38/416 (9%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           L+  +I    K  + D A   +D MKS +++  +  +++ +  + + G    A   F+ +
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
           E  G  PD++ ++ +I +LC+  R  EA   F+ L K++  P    Y  ++ G+  AG  
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            EA  +    +  G  P+V  Y+ ++  L + G++  A  VF EM +    PN  T+N L
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNIL 383

Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
           + +  +A + +   ++ + M++ G   +  T N ++D  CK  KL++A  +   M  K C
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
            P+  TF  +   + K+G V+ A+++Y KM D  C  N++ Y  L++ F      +   K
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503

Query: 449 LKKEM--------------------EENEVE---------------PNVNTYRILITMYC 473
           + K+M                    +  E E               P+  +Y ILI    
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563

Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             G  N  Y+    M E+ C+   +  Y +V+    + G++ K  +L+E+M  +GF
Sbjct: 564 KAGFANETYELFYSMKEQGCVLD-TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 141/341 (41%), Gaps = 3/341 (0%)

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           ++RR      A E    + R  E    P+     +++   CR   A + Q   +     F
Sbjct: 71  VLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD-QILGEMSVAGF 129

Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
            P V     +V G  +A  + E   V + M+    +P    Y+ +I A            
Sbjct: 130 GPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189

Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
           +F +M E+G EP    F  L+R   K  R +  L + ++MK    +AD + YN  ID   
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249

Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
           K GK++ A K  + +   G  P+  T+  +   + K   ++ A  M+  ++  +  P T 
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309

Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
            YN ++  + ++   D    L +        P+V  Y  ++T    MG  + A K   EM
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369

Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
             +K   P  S Y +++  L RAG+L    EL + M   G 
Sbjct: 370 --KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 113/237 (47%), Gaps = 2/237 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  +I+   K+ + D A+   +  KS+ +E+ V  +S L+  + + G   EA      + 
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           + G  P+   ++ ++  L +    +EA   F S+K+ K  P+ + Y  L+ G C+    +
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +A   ++EM+  G++P+  +Y+ +I  L + G I  A  +F      G  P+S  +N ++
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
                 +R      ++ + +R G      T   L+D   K+  LE A  ++ +++R+
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA-AIVGAVLRE 860



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 36/204 (17%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+  GKV + D A+  ++ +  + +   + T++ L+   V+A    EA+  F  M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK------------------------ 245
           +E  C P+++ + I+I+ LC+ R+ ++A  F+  ++                        
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778

Query: 246 -------DKFE-----PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
                  D+F+     PD   Y  ++ G        +A  +F E +  G+  +  T  ++
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838

Query: 294 IDALCRCGQITRAHDVFAEMLEVG 317
           +D L +   + +A  V A + E G
Sbjct: 839 LDTLHKNDCLEQAAIVGAVLRETG 862


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 186/382 (48%), Gaps = 6/382 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I    + ++ + A    + M+      ++ T+ IL+  + +AG   EA+  
Sbjct: 175 PDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGL 234

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCR 264
              M+  G   D I ++ +I   C        ++ FD + ++ + P  I Y  L+RG+C+
Sbjct: 235 LKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
            G + EA  +F  M   G++PNVYTY+ +ID LC  G+   A  +   ML+   EPN +T
Sbjct: 295 LGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVT 354

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           +N ++    K S     L++   MK+     D ITYN L+   C  G L++A K+L  M+
Sbjct: 355 YNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLML 414

Query: 385 RKG--CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           +     +P+  +FN +   + K   ++ A  +Y  + +     + VT NIL+     S  
Sbjct: 415 KDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGD 474

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
            +  ++L K++  +++ PN +TY  +I  +C  G  N A   + +M   + L P    Y 
Sbjct: 475 VNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSE-LPPSVFDYN 533

Query: 503 MVLQQLRRAGQLQKHEELVEKM 524
            +L  L + G L +   L E+M
Sbjct: 534 CLLSSLCKKGTLDQAWRLFEEM 555



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 173/368 (47%), Gaps = 2/368 (0%)

Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAF 221
           R  ++A+ F   M   +  I   + S L+  +V+      A      M + G A +   +
Sbjct: 86  RNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNY 145

Query: 222 SIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           +I++  LCR     +A S    ++ +   PDV+ Y  ++RG+C    + +A ++  EM+ 
Sbjct: 146 NILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQG 205

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
           +G   ++ T+ I+IDA C+ G++  A  +  EM   G E + I + +L+R        ++
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDR 265

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
              +++++   G     ITYN LI   CK G+L++A ++   M+ +G  PN  T+  +  
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLID 325

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            +  +G    A ++   M     EPN VTYNI++            L++ + M++    P
Sbjct: 326 GLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRP 385

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL-KPGSSVYEMVLQQLRRAGQLQKHEE 519
           +  TY  L+   C  G  + A K +  M+++     P    +  ++  L +  +L +  +
Sbjct: 386 DNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALD 445

Query: 520 LVEKMVDR 527
           + + +V++
Sbjct: 446 IYDLLVEK 453



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 181/380 (47%), Gaps = 4/380 (1%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I    K+ +   A    + M  R V   V T++ L+      G   EA+   N M 
Sbjct: 285 YNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLML 344

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
           +    P+ + ++I+I+ LC+    ++A    + +K  +  PD I Y +L+ G C  G++ 
Sbjct: 345 QKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLD 404

Query: 270 EAERVFREM--KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           EA ++   M    +   P+V +++ +I  LC+  ++ +A D++  ++E     + +T N 
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNI 464

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+   +K+    K ++++ Q+       ++ TY  +ID  CK G L  A  +L  M    
Sbjct: 465 LLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSE 524

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
             P+   +N +   + K G ++ A R++ +M+     P+ +++NI++     +       
Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAE 584

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
            L   M    + P++ TY  LI  +  +G+ + A  +  +MI+    +P + + + VL+ 
Sbjct: 585 SLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSG-FEPDAHICDSVLKY 643

Query: 508 LRRAGQLQKHEELVEKMVDR 527
               G+  K  E V+K+VD+
Sbjct: 644 CISQGETDKLTEFVKKLVDK 663



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 161/351 (45%), Gaps = 7/351 (1%)

Query: 111 TVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHF 170
           T   +I+  CGV      LQ+L+        P  V     Y+ +IN   K      A   
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVT----YNIIINKLCKDSLVADALEI 374

Query: 171 IDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM--EEYGCAPDKIAFSIVISIL 228
           ++LMK R       T++ L+      G   EA      M  +     PD I+F+ +I  L
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434

Query: 229 CRKRRASEAQSFFDSLKDKFEPDVIVYTN-LVRGWCRAGNISEAERVFREMKMAGIQPNV 287
           C+  R  +A   +D L +K     IV TN L+    ++G++++A  +++++  + I PN 
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
            TY+ +ID  C+ G +  A  +  +M      P+   +N L+    K    ++  +++ +
Sbjct: 495 DTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEE 554

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
           M+R     D I++N +ID   K G ++ A  +L  M   G +P+  T++ +     KLG 
Sbjct: 555 MQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGY 614

Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
           ++ A   + KM D   EP+    + +++   +   TD + +  K++ + +V
Sbjct: 615 LDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDV 665



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 144/342 (42%), Gaps = 15/342 (4%)

Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKR--RASEAQSFFDSLK 245
           ++VRR +   L ++ V+ F+  E              +  LC     +   A S F    
Sbjct: 18  LVVRRLLSQRLCSKLVNTFSETETK------------LRSLCEDSNPQLKNAVSVFQQAV 65

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           D          NL+    R+ N   A   +R+M       N  + S +++   +  +   
Sbjct: 66  DSGGSLSFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGF 125

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           AH V A ML+ G   N   +N L++   +     K + +  +M++     D ++YN +I 
Sbjct: 126 AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIR 185

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             C+  +LE A+++ N M   GC+ +  T+ ++     K G ++ A  +  +MK    E 
Sbjct: 186 GFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEA 245

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
           + + Y  L++ F      D    L  E+ E    P   TY  LI  +C +G    A + I
Sbjct: 246 DLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASE-I 304

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
            E + E+ ++P    Y  ++  L   G+ ++  +L+  M+ +
Sbjct: 305 FEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQK 346


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 199/435 (45%), Gaps = 41/435 (9%)

Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
           + FF W   + ++ H+ + Y  +I++       D         K   + +TV + + L++
Sbjct: 128 IRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIK 187

Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEP 250
            +   G+  E +  + RM+E G  P   +++ +++ L   +    A+  F+ +++ K  P
Sbjct: 188 SFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGP 247

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTY-------------------- 290
           DV+ Y  +++G+C  G   +A    + M++  + P+  TY                    
Sbjct: 248 DVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLY 307

Query: 291 ---------------SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
                          S+VI  LC+ G+    + VF  M+  GC+ N   +  L+  + K 
Sbjct: 308 HEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKC 367

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
               + + ++ +MK+ G E D +TY  +++  CK G+L++A++ +     KG   NA  +
Sbjct: 368 GNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFY 427

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
           + +   + K G V+ A R++ +M    C P++  YN L+   A     D  L L K ME 
Sbjct: 428 SSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEV 487

Query: 456 NEVEPNVNTYRILITMYCGM--GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
           +  +  V TY ILIT   G+   H N     + +++ +K + P ++ +  +   L  +G+
Sbjct: 488 DGCDQTVYTYTILIT---GLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGK 544

Query: 514 LQKHEELVEKMVDRG 528
           + +  +++++M   G
Sbjct: 545 VARACKILDEMAPMG 559



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 177/386 (45%), Gaps = 5/386 (1%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
            PD+  Y+ MI    +V +   A+  +  M+ RNV     T+  L++     G     + 
Sbjct: 246 GPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLG 305

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWC 263
            ++ M+E G       +S+VI  LC+  +  E  + F+++  K  + +V +YT L+    
Sbjct: 306 LYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNA 365

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           + GN+ EA  +F+ MK  G++P+  TY +++++LC+ G++  A +        G   N++
Sbjct: 366 KCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAM 425

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
            +++L+    K+ R ++  +++ +M + GC  D+  YN LID   K GK+++A+ +   M
Sbjct: 426 FYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRM 485

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
              GC+    T+ ++   + +      A  ++  M D    P    +  L      S   
Sbjct: 486 EVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKV 545

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
               K+  EM    V P    +  +I + C  G    A K    +++     PG  V  +
Sbjct: 546 ARACKILDEMAPMGVIPE-TAFDDMINILCKAGRIKEACKLADGIVDRGREIPG-RVRTV 603

Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++  LR+AG      +L+   +  G+
Sbjct: 604 LINALRKAGNADLALKLMRSKIGIGY 629



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 1/207 (0%)

Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
           + +L+ V       + V  V+++ K +G      + N LI      G +E+ + V   M 
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206

Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
             G  P+  ++N +   +     +  A R++  M++ K  P+ VTYN +++ +     T 
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266

Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
              +  K ME   V P+  TY  LI      G +++      EM +EK L+    VY +V
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEM-DEKGLEIPPHVYSLV 325

Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
           +  L + G+  +   + E M+ +G  A
Sbjct: 326 IGGLCKDGKRVEGYTVFENMISKGCKA 352


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 171/338 (50%), Gaps = 7/338 (2%)

Query: 195 RAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD----KFEP 250
           R G A + +    RM E GC PD ++++I++  LC ++RA EA      + D       P
Sbjct: 144 RVGEAMDVL--LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPP 201

Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
           +V+ Y+ ++ G+   G + +   +F EM   GI P+V TY+ VID LC+     RA  VF
Sbjct: 202 NVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF 261

Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
            +M++ G +PN  T+N L+  ++   + ++V+++  +M   G + +  TY  L++  CK+
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKN 321

Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
           G+  +A    +SM+ KG  P+ +T+ ++    +  G ++  H +   M      PN   +
Sbjct: 322 GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381

Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           NI    +A     D  + +  +M +  + P+  +Y  LI   C +G  ++A     +MI 
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           E  + P   V+  ++  L    + +K EEL  +M++ G
Sbjct: 442 EG-VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 176/381 (46%), Gaps = 2/381 (0%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y  ++N   K  +   A  F D M  + ++ +V T+ I++  Y   G  +E     N M 
Sbjct: 311 YGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMV 370

Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
             G +P+   F+I  S   +     +A   F+ ++ +   PD + Y  L+   C+ G + 
Sbjct: 371 ANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVD 430

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           +AE  F +M   G+ P++  +S ++  LC   +  +  ++F EML VG  PN + FN ++
Sbjct: 431 DAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTIL 490

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               K  R  +  ++ + ++ +G   D I+YN LID HC  G +++A K+L  MV  G  
Sbjct: 491 CNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLK 550

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           P++ ++N +     K G ++ A+  + KM      P  VTYN ++     +K      +L
Sbjct: 551 PDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 610

Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
              M  +  + ++ TY I++   C     + A K  + +   K L+     + +++  L 
Sbjct: 611 YLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLC-SKGLQLNIITFNIMIGALL 669

Query: 510 RAGQLQKHEELVEKMVDRGFT 530
           + G+ +   +L   +   G  
Sbjct: 670 KGGRKEDAMDLFAAIPANGLV 690



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 159/347 (45%), Gaps = 3/347 (0%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SPD   Y  +I+   K+ + D A    + M +  V   +  FS LV          +   
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE 469

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWC 263
            F  M   G  P+ + F+ ++  LC++ R  E Q   DS++     PDVI Y  L+ G C
Sbjct: 470 LFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 529

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
            AG I EA ++   M   G++P+ ++Y+ ++   C+ G+I  A+  F +ML  G  P  +
Sbjct: 530 LAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVV 589

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+N ++    +  R  +  ++Y  M   G + D  TYN +++  CK   +++AIK+  ++
Sbjct: 590 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
             KG   N  TFN++   + K G    A  ++  +       N VTY ++++      S 
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709

Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
           +    L   ME+N   PN      L+      G  + A  Y+ ++ E
Sbjct: 710 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 756



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 171/417 (41%), Gaps = 72/417 (17%)

Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
           V ++S ++  +   G   +  + F  M + G  PD + ++ VI  LC+ +    A++ F 
Sbjct: 203 VVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQ 262

Query: 243 SLKDK-FEPDVIVYTNLVRGW-----------------------------------CRAG 266
            + D   +P++  Y  L+ G+                                   C+ G
Sbjct: 263 QMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNG 322

Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
              EA   F  M   GI+P+V TY I++      G ++  HD+   M+  G  PN   FN
Sbjct: 323 RCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFN 382

Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
                + K    +K + ++N+M++ G   D ++Y  LID  CK G+++DA    N M+ +
Sbjct: 383 IFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE 442

Query: 387 GC-----------------------------------NPNASTFNMIFRCISKLGDVNGA 411
           G                                    +PN   FN I   + K G V   
Sbjct: 443 GVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEG 502

Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
            R+   ++ +   P+ ++YN L+     + + D   KL + M    ++P+  +Y  L+  
Sbjct: 503 QRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHG 562

Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           YC  G  ++AY + R+M+    + PG   Y  +L  L +  +  + +EL   M++ G
Sbjct: 563 YCKAGRIDSAYSHFRKMLSNG-ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 164/363 (45%), Gaps = 19/363 (5%)

Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
            +D ++   V   V +++ L+  +  AG   EA      M   G  PD  +++ ++   C
Sbjct: 505 LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYC 564

Query: 230 RKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
           +  R   A S F   L +   P V+ Y  ++ G  +    SEA+ ++  M  +G + ++Y
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIY 624

Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
           TY+I+++ LC+   +  A  +F  +   G + N ITFN ++   +K  R E  + ++  +
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684

Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
              G   + +TY  +++   ++G LE+   + ++M + G  PN+   N + R +   GD+
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744

Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
           + A     K+ +        T ++L+ +F++ +       L K+            YRIL
Sbjct: 745 SRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKK------------YRIL 792

Query: 469 -----ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
                  +       ++AY   REM+  K L P    Y  +L  L + G+  + +EL   
Sbjct: 793 NEANSSALIKKARRIDDAYSLFREML-MKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 851

Query: 524 MVD 526
           M++
Sbjct: 852 MIN 854



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 18/310 (5%)

Query: 235 SEAQSFFDSLKDKFEPDVIVYTN-----LVRGWCRAGNISEAE-------RVFREMKMAG 282
            +A   FD L     P  +V  N     + R   R    SE+E       R+ R+  +  
Sbjct: 31  GDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK- 89

Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
           + PN  TYSI+I   CR G +      F  +L+ G   + I  N L+       R  + +
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 343 QVYNQ-MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK---GCNPNASTFNMI 398
            V  Q M  LGC  DT++YN L+   C + + E+A+++L+ M       C PN  +++ +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
                  G V+  + ++ +M D    P+ VTY  ++     ++  D    + ++M +N V
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
           +PN++TY  LI  Y  +G W    + + EM      KP    Y  +L  L + G+ ++  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEM-SAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 519 ELVEKMVDRG 528
              + M+ +G
Sbjct: 329 FFFDSMIGKG 338



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 153/371 (41%), Gaps = 44/371 (11%)

Query: 203 VHAFNRMEE---YGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNL 258
           V  FNRM        AP++  +SI+I   CR        + F   LK  +  D IV   L
Sbjct: 76  VSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQL 135

Query: 259 VRGWCRAGNISEAERV-FREMKMAGIQPNVYTYSIVIDALCR------------------ 299
           + G C    + EA  V  + M   G  P+  +Y+I++  LC                   
Sbjct: 136 LNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQ 195

Query: 300 ---C-----------------GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
              C                 GQ+ + +++F EM++ G  P+ +T+  ++    KA   +
Sbjct: 196 VWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFD 255

Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
           +   V+ QM   G + +  TYN LI  +   GK ++ +++L  M   G  PN  T+  + 
Sbjct: 256 RAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLL 315

Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
             + K G    A   +  M     +P+  TY I++  +AT  +   +  L   M  N + 
Sbjct: 316 NYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGIS 375

Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
           PN + + I  + Y   G  + A     +M  ++ L P +  Y  ++  L + G++   E 
Sbjct: 376 PNHHIFNIFFSAYAKCGIIDKAMDIFNKM-RQQGLSPDAVSYGALIDALCKLGRVDDAEV 434

Query: 520 LVEKMVDRGFT 530
              +M++ G T
Sbjct: 435 KFNQMINEGVT 445



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 106/214 (49%), Gaps = 1/214 (0%)

Query: 226  SILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
            +++ + RR  +A S F + L     PDV+ Y  ++ G  + G  SEA+ ++  M  +  Q
Sbjct: 799  ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858

Query: 285  PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
             N+YTY+I+++ LC+   +  A  +F  +   G + N ITFN ++   +K  R E  + +
Sbjct: 859  MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918

Query: 345  YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
            +  +   G   D +TY  + +   ++G LE+   +  +M + G   ++   N + R + +
Sbjct: 919  FAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQ 978

Query: 405  LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA 438
             GD++ A     K+ +        T + L+ +F+
Sbjct: 979  RGDISRAGAYLSKLDEKNFSLEASTTSELISLFS 1012



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/396 (19%), Positives = 159/396 (40%), Gaps = 31/396 (7%)

Query: 151  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
            Y+ ++N   K    D A      + S+ +++ + TF+I++   ++ G   +A+  F  + 
Sbjct: 626  YNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 685

Query: 211  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
              G   + + + +V+  L  +    E  S F ++ K+   P+  +   LVR     G+IS
Sbjct: 686  ANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 745

Query: 270  EAERVFREMKMAGIQPNVYTYSIVIDALC----------------------------RCG 301
             A     ++          T S++I                                +  
Sbjct: 746  RAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKAR 805

Query: 302  QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
            +I  A+ +F EML  G  P+ +T+N ++    +  R  +  ++Y  M     + +  TYN
Sbjct: 806  RIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN 865

Query: 362  FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
             +++  CK   +++A K+  S+  KG   N  TFN++   + K G    A  ++  +   
Sbjct: 866  IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 925

Query: 422  KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
               P+ VTY ++ +      S +    L   ME++    +      L+      G  + A
Sbjct: 926  GLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA 985

Query: 482  YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
              Y+ ++ E+      S+  E++   L   G+ Q H
Sbjct: 986  GAYLSKLDEKNFSLEASTTSELI--SLFSRGEYQHH 1019


>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
          Length = 490

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 191/364 (52%), Gaps = 16/364 (4%)

Query: 100 QISTAHSISPSTV---RHVIE---KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHE 153
           Q+    S+S S +   + +I+   K     HG P+ Q L F+ + +A   F HS      
Sbjct: 54  QVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPI-QTLEFYRYASAIRGFYHSSFSLDT 112

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           M+ + G+ R+FD  W  +   K ++   I+  T  +++ R  +     + V +F + +  
Sbjct: 113 MLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR- 171

Query: 213 GCAPD---KIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              PD      F+ ++  LC+++  ++A++ + SLK +F+PD+  +  L+ GW    +  
Sbjct: 172 -LVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSE 227

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE  F EMK  G++P+V TY+ +ID  C+  +I +A+ +  +M E    P+ IT+  ++
Sbjct: 228 EAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVI 287

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + +K  +V  +MK  GC  D   YN  I   C   +L DA K+++ MV+KG +
Sbjct: 288 GGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 347

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PNA+T+N+ FR +S   D+  +  +Y +M   +C PNT +   L++MF   +  DM ++L
Sbjct: 348 PNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 407

Query: 450 KKEM 453
            ++M
Sbjct: 408 WEDM 411


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 159/298 (53%), Gaps = 4/298 (1%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           L G+V++   + HF D + ++  ++   ++  L+    + G    A+     +E+     
Sbjct: 134 LKGEVQK---SVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGL 190

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
           + + ++ +I  LC+ +  +EA  F+  +  +   P+VI YT L+ G+C AG ++ A  + 
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLL 250

Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
            EM +  I PNVYTY+I+IDALC+ G++  A ++ AEM   G   + +T+ +L+    K 
Sbjct: 251 NEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKN 310

Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
              +K   ++ +MK  G + +  TY  LID  CK G+L+DA K+   ++ KGC  +  T+
Sbjct: 311 QNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTY 370

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
           N++   + K G ++ A  +  KM+D  C PN VT+ I+++        D   KL  EM
Sbjct: 371 NVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 178/387 (45%), Gaps = 4/387 (1%)

Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           H+P +  + E++    K++ +  A      M+ + +E  + T +IL+  +   G  + + 
Sbjct: 48  HTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSF 107

Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
               ++ + G  P+ I  + ++  LC K    ++  F D  +   F+ + + Y  L+ G 
Sbjct: 108 SVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGL 167

Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
           C+ G    A +  R ++ +    NV  Y+ +ID LC+   +  A+D ++EM   G  PN 
Sbjct: 168 CKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNV 227

Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
           IT+  L+     A +      + N+M       +  TY  LID  CK+GK+++A  +L  
Sbjct: 228 ITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAE 287

Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
           M  +G   +  T+  +     K  +++ A  ++ KMK+   +PN  TY  L+        
Sbjct: 288 MHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGR 347

Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
                KL +++       +V TY ++I   C  G  + A     +M +  C+ P    +E
Sbjct: 348 LKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCI-PNVVTFE 406

Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRGF 529
           ++++ L +  +  K E+L+ +M+ +G 
Sbjct: 407 IIIRSLFKKDENDKAEKLLHEMIAKGL 433



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 152/364 (41%), Gaps = 37/364 (10%)

Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLV 259
           +A+  FN M      P  + F  ++  L + +  S A S    ++ K  EP+++    L+
Sbjct: 35  DAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILI 94

Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
             +C  G +S +  V  ++   G QPN  T + ++  LC  G++ ++     +++  G +
Sbjct: 95  NCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQ 154

Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD--------- 370
            N +++  L+    K   T   ++    ++      + + YN +ID  CKD         
Sbjct: 155 MNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDF 214

Query: 371 --------------------------GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
                                     G+L  A  +LN M+ K  NPN  T+ ++   + K
Sbjct: 215 YSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCK 274

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
            G V  A  +  +M       + VTY  L+  F  +++ D    L  +M+E  ++PN  T
Sbjct: 275 EGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYT 334

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           Y  LI   C  G   +A K  ++++ + C       Y +++  L + G L +   +  KM
Sbjct: 335 YTALIDGLCKGGRLKDAQKLFQDLLVKGCCID-VCTYNVMIGGLCKEGMLDEALAIKSKM 393

Query: 525 VDRG 528
            D G
Sbjct: 394 EDNG 397



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 1/261 (0%)

Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
           + +A   F  M +    P +  +  ++  L +    + A  +  +M   G EPN +T N 
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
           L+       +      V  ++ +LG + +TIT   L+   C  G+++ ++   + +V +G
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
              N  ++  +   + K+G+   A +    ++D     N V YN ++      K  +   
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212

Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
               EM    + PNV TY  LI  +C  G    A+  + EMI  K + P    Y +++  
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMI-LKNINPNVYTYAILIDA 271

Query: 508 LRRAGQLQKHEELVEKMVDRG 528
           L + G++++ + L+ +M  RG
Sbjct: 272 LCKEGKVKEAKNLLAEMHYRG 292


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 186/395 (47%), Gaps = 14/395 (3%)

Query: 138 VTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFSILVRRYVR 195
            + RP+ V     Y  ++N   K  +   A   +D M  ++++I  D  T + +V    +
Sbjct: 166 ASVRPDVVT----YGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK 221

Query: 196 AGLAAEAVHAF--NRMEE-YGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDV 252
           +G   EA+ AF   RM   +GC P+ + ++ +I   CR    S A    + ++++  P  
Sbjct: 222 SGRVQEAL-AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQN 280

Query: 253 IVYTN-LVRGWCRAGNISEAERVFREMKMAGIQP--NVYTYSIVIDALCRCGQITRAHDV 309
           IV  N +V G CRAG    A   FRE +    +   N  TYS ++ AL     +  A ++
Sbjct: 281 IVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMEL 340

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
           F E +  G  P++I +  ++    +A R E    + + MK  G + DT  YN LI   C+
Sbjct: 341 FHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCR 400

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
             +L +A ++L  M   G  P+  T+N +     K GD      + GKM D  C+P+ +T
Sbjct: 401 KKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVIT 460

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +  L+  +      D  L++ + M+E+ + PN   Y  LI   C  G  + A +   EM 
Sbjct: 461 FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM- 519

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
           +EK +    + +  +L+ LR     +K  EL+++M
Sbjct: 520 KEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 157/324 (48%), Gaps = 7/324 (2%)

Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
           Y+ +I+   +V    +A+  ++ M++  V   + T + +V    RAG    A+  F   E
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--E 306

Query: 211 EYGCAPD----KIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRA 265
           +    P+     + +S ++  L        A   F + + +   PD I+Y  ++ G  +A
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G + +A  +   MK AG + +   Y+I+I   CR  ++  A+++  EM EVG  P+  T+
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
           N L+    KA     V ++  +M   GC+   IT+  L+  +CK GK+++A+++L SM  
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
            G +PN   +N +   + K GDV+ A  ++ +MK+     N  T+N L++        + 
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 446 VLKLKKEMEENEVEPNVNTYRILI 469
             +L  +M E    P+  T  +L+
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLM 570



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 131/252 (51%), Gaps = 1/252 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
           T+S LV   +       A+  F+     G +PD I +  +IS L +  R  +A S   S+
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379

Query: 245 KDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           K+  F+ D   Y  L+ G+CR   + EA  + +EMK  GI+P+V TY+ ++   C+ G  
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
               ++  +M++ GC+P+ ITF  L+  + K  + ++ L++   M   G   + + YN L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID  CK G ++ AI++ + M  K    N +TFN + + +        A  +  +M++ +C
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559

Query: 424 EPNTVTYNILMQ 435
            P+ VT ++LM+
Sbjct: 560 FPDYVTVDVLME 571



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 9/320 (2%)

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKD--KFEPDVIVYTNLVRGWCRAGNISEAERV 274
           D  AF+ +++ L R R        +  ++      PDV+ Y  LV G C+AG + +A RV
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 275 FREMKMAG--IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV--GCEPNSITFNNLMR 330
              M      I+P+V T + V+D LC+ G++  A     + +    GC PN++T+N L+ 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS--MVRKGC 388
              +        ++  +M+  G   + +T N ++   C+ G+   A++       V    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
             NA T++ +   +    +V  A  ++ +       P+ + Y  ++     +   +    
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374

Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
           +   M+E   + +   Y ILI  +C     + AY+ ++EM +E  ++P    Y  +L   
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLSGS 433

Query: 509 RRAGQLQKHEELVEKMVDRG 528
            +AG     +EL+ KM+D G
Sbjct: 434 CKAGDFAAVDELLGKMIDDG 453



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 18/256 (7%)

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC---EPNSITFNNLMRVHVKASRTEKVL 342
           +V+ ++ ++ AL R   +     ++A M   GC    P+ +T+  L+    KA R    L
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 343 QVYNQMKR--LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK--GCNPNASTFNMI 398
           +V + M R  L    D +T N ++D  CK G++++A+  +   +    GC PN  T+N +
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE--N 456
                ++G+++ A+ +  KM++     N VT N ++     +  T   L+  +E      
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 457 EVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLK---PGSSVYEMVLQQLRRAGQ 513
           E + N  TY  L+     + H NN    + E+  EK  +   P + +Y  ++  L +AG+
Sbjct: 313 EGKGNAVTYSTLVG---ALLHTNNVGMAM-ELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 514 LQKHEELVEKMVDRGF 529
           L+    +   M + GF
Sbjct: 369 LEDACSMASSMKEAGF 384



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 38/79 (48%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y+ +I+   K    DLA    D MK ++V   V TF+ L++      +  +A    ++M
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554

Query: 210 EEYGCAPDKIAFSIVISIL 228
            E  C PD +   +++  L
Sbjct: 555 REERCFPDYVTVDVLMEWL 573


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 196/391 (50%), Gaps = 15/391 (3%)

Query: 145 VHSPDLYHEMINL-----AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
           ++SPD Y   I L     +GK+ +   A  F++ +  + +   + TF+I +    RA   
Sbjct: 11  IYSPDAYTVGILLRSLLKSGKIEK---AHRFVEQLLVKGL-CDISTFNIYISGLCRASRI 66

Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNL 258
            +A   F+ M ++G  P++I ++ ++S LC   R S+AQ+ ++ + K  + PDV+ Y  L
Sbjct: 67  GDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL 126

Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
           + G+C+ G + EA ++F      G  P+V TY+ +I+  C+  ++  A  +   M+    
Sbjct: 127 LHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESL 186

Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD-GKLEDAI 377
            P+ +T+N+L+    K  R ++   +       G   + ITY+ LI   C++  +LE A 
Sbjct: 187 VPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRRLESAR 243

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
           ++L  MV  GC P+  ++N +   +++   V+ A +++G +     EP   TYNIL+   
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGL 303

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 +   +L   + ++ +EP+  TY + I   C  G   +A   +++M E+ C+ P 
Sbjct: 304 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV-PD 362

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              +  V+  L +  ++ + E L+  M  +G
Sbjct: 363 VVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 199/406 (49%), Gaps = 14/406 (3%)

Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSIL 189
           + L  F+    R  FV     Y+ +IN   K  + D A   +  M S ++   V T++ L
Sbjct: 138 EALKIFDGAVKRG-FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSL 196

Query: 190 VRRYVRAGLAAEAVHAFNRM--EEYGCAPDKIAFSIVISILCRK-RRASEAQSFFDSLK- 245
           V    + G   EA     RM   + G +P+ I +S +IS LCR+ RR   A+   + +  
Sbjct: 197 VNGLCKNGRVDEA-----RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVL 251

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
           +  +PD++ Y  L+ G  R   +SEA ++F  +   G +P V TY+I+ID L +  ++  
Sbjct: 252 NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A ++F+ +++ G EP++IT+   +    KA R E  L +   M   GC  D +++N +I+
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 371

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK+ ++++A  +L+ M  KGC+PNA +FN +     + G    A   + +M     +P
Sbjct: 372 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431

Query: 426 NTVTYNILMQMFATSKSTDMV---LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
             VTYNIL+     ++    +   + L   M E    P+V TY  LI      G  ++A 
Sbjct: 432 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 491

Query: 483 KYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
           + +  M  + C+ P    Y  ++  L    ++ +  EL   MV++G
Sbjct: 492 RLLGAMEAKGCI-PNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 6/345 (1%)

Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
           PD+  Y+ +I+   + +    A      +  +  E  V T++IL+   ++     EA   
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFEL 315

Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCR 264
           F+ + ++G  PD I +++ I  LC+  R  +A      + +K   PDV+ +  ++ G C+
Sbjct: 316 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 375

Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
              + EAE +   M+  G  PN  +++ +I   CR G+  +A   F EML+ G +P  +T
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 435

Query: 325 FNNLMRVHVKA---SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
           +N L+    KA    R ++ + +++ M   G   D +TY+ LID   K GKL+DA ++L 
Sbjct: 436 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLG 495

Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
           +M  KGC PN  T+N +   +  L  V+ A  ++  M +  C P+T+TY  ++      +
Sbjct: 496 AMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQE 555

Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
             D  L L     E  V P    Y  LI   C +   + A K ++
Sbjct: 556 MVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
 gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
          Length = 674

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 2/329 (0%)

Query: 130 QVLSFFNWVTARPEFVH-SPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
           + L+FF W+ ARPE    +   Y+ M+ +    RQ +L+   ++ M  R ++    TFS 
Sbjct: 124 KALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFST 183

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-K 247
           L+    R     EA+  F RM+  G  PD++ ++ VI +  R  R +EA   ++ LK   
Sbjct: 184 LINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVN 243

Query: 248 FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAH 307
           ++ D + Y  +   + RAG+     ++ +EM+ +G  PN    + ++  L + G++ +A 
Sbjct: 244 WKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAK 303

Query: 308 DVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH 367
            VF EM   G  P  +T + L+ ++ +    ++  +VY  +K  G + D   YN L+   
Sbjct: 304 KVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKAC 363

Query: 368 CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT 427
            + G++E A  +L  M R GCNP+  T+       +  G V+ A RM+ K+  L  +P+T
Sbjct: 364 VEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDT 423

Query: 428 VTYNILMQMFATSKSTDMVLKLKKEMEEN 456
             + ++++    +   +   K+  EM E+
Sbjct: 424 PLFTVMIRACKLAGEIEQASKIFDEMMES 452



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 147/305 (48%), Gaps = 4/305 (1%)

Query: 224 VISILCRKRRASEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
           ++++L    R  +A +FF+ LK +   +E +   Y  +++       +  +E++  EM  
Sbjct: 112 IVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTG 171

Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
            GIQP+ YT+S +I+   RC Q   A   F  M   G  P+ +T+N+++ ++ +  R  +
Sbjct: 172 RGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNE 231

Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
            +++Y ++K +  + DT+TY  + + + + G  +  I+++  M   G +PNA   N +  
Sbjct: 232 AVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMG 291

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            +SK G VN A +++ +M+     P  VT +IL++M+    + D   ++ + ++    + 
Sbjct: 292 TLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKC 351

Query: 461 NVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
           +V  Y  L+      G    A   ++EM    C  P    Y   +      G +     +
Sbjct: 352 DVAVYNSLMKACVEGGRVEQAEDILKEMKRAGC-NPDHLTYRTAMNTYATKGMVDPARRM 410

Query: 521 VEKMV 525
            +K+V
Sbjct: 411 FDKVV 415


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 208/450 (46%), Gaps = 37/450 (8%)

Query: 83  PSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARP 142
           P+L P   +P LS          +I  S ++  + +  G R          FF W + R 
Sbjct: 49  PALEP--LVPFLS---------KNIITSVIKEEVNRQLGFR----------FFIWASRR- 86

Query: 143 EFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
           E + S + +  +I++  +    DL W  ++ +KS  V +    F +L+  Y + GLA +A
Sbjct: 87  ERLRSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKA 146

Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF--------DSLKDKFEPDVIV 254
           V +F RM+E+ C PD   +++++ I+ R+        FF        + LK    P++  
Sbjct: 147 VESFGRMKEFDCRPDVFTYNVILRIMMRE------DVFFMLAFAVYNEMLKCNCSPNLYT 200

Query: 255 YTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML 314
           +  L+ G  + G  S+A+++F +M   GI PN  TY+I+I  LC+ G    A  +F EM 
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMK 260

Query: 315 EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLE 374
             G  P+S+  N L+    K  R  +  ++    ++ G       Y+ LID   +  +  
Sbjct: 261 ASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT 320

Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
            A ++  +M+++   P+   + ++ + +SK G +  A ++   M      P+T  YN ++
Sbjct: 321 QAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVI 380

Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
           +        +    L+ EM E E  P+  T+ ILI   C  G    A +   E IE+   
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLE-IEKSGC 439

Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
            P  + +  ++  L ++G+L++   L+ KM
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKM 469



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 165/383 (43%), Gaps = 50/383 (13%)

Query: 147 SPDLYHEMINLAG---KVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
           SP+LY   I + G   K R  D A    D M  R +     T++IL+    + G   +A 
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSD-AQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDAR 253

Query: 204 HAFNRMEEYGCAPDKIA-----------------------------------FSIVISIL 228
             F  M+  G  PD +A                                   +S +I  L
Sbjct: 254 KLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313

Query: 229 CRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
            R RR ++A   + + LK   +PD+I+YT L++G  +AG I +A ++ R M   GI P+ 
Sbjct: 314 FRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDT 373

Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
           Y Y+ VI ALC  G +     +  EM E    P++ T   L+    +     K  +++ +
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLE 433

Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF-------NMIFR 400
           +++ GC     T+N LID  CK G+L++A  +L+ M        AS F       N  F 
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM---EVGRPASLFLRLAHSGNRSFD 490

Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
            + + G +  A++      D    P+ V+YN+L+  F      D  LKL   ++   + P
Sbjct: 491 TMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSP 550

Query: 461 NVNTYRILITMYCGMGHWNNAYK 483
           +  TY  LI     +G    A+K
Sbjct: 551 DSVTYNTLINGLHRVGREEEAFK 573



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/470 (22%), Positives = 204/470 (43%), Gaps = 56/470 (11%)

Query: 109 PSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL 166
           P +V H  +++  C +   +   ++L  F     +  FV     Y  +I+   + R++  
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEAFELLRLFE----KDGFVLGLRGYSSLIDGLFRARRYTQ 321

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A+     M  RN++  +  ++IL++   +AG   +A+     M   G  PD   ++ VI 
Sbjct: 322 AFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIK 381

Query: 227 ILCRKRRASEAQSF-FDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC +    E +S   +  + +  PD   +T L+   CR G + +AE +F E++ +G  P
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSP 441

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT------- 338
           +V T++ +ID LC+ G++  A  +  +M EVG  P S+     +R+    +R+       
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKM-EVG-RPASL----FLRLAHSGNRSFDTMVQS 495

Query: 339 EKVLQVYNQMKRL---GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
             +L+ Y  +      G   D ++YN LI+  C++G ++ A+K+LN +  KG +P++ T+
Sbjct: 496 GSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTY 555

Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNT---------------VTYNILMQMFA-- 438
           N +   + ++G    A +++    D +  P                 V +N+ M+     
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKI 615

Query: 439 ---------------TSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
                              T+  L+   E++  + E  +  Y I +   C  G ++ A  
Sbjct: 616 SCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALM 675

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
               + E+K L    S  +++    +R  QL    ++    +D  F   P
Sbjct: 676 VFSVLREKKILVTPPSCVKLIHGLCKRE-QLDAAIDVFLYTLDNNFKLMP 724



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 124/259 (47%), Gaps = 2/259 (0%)

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +   E+K  G+  + Y + ++I A  + G   +A + F  M E  C P+  T+N ++R+ 
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIM 172

Query: 333 VKASRTEKV-LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
           ++      +   VYN+M +  C  +  T+  L+D   K G+  DA K+ + M  +G +PN
Sbjct: 173 MREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
             T+ ++   + + G    A +++ +MK     P++V +N L+  F          +L +
Sbjct: 233 RVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
             E++     +  Y  LI        +  A++    M++   +KP   +Y +++Q L +A
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRN-IKPDIILYTILIQGLSKA 351

Query: 512 GQLQKHEELVEKMVDRGFT 530
           G+++   +L+  M  +G T
Sbjct: 352 GKIEDALKLLRSMPSKGIT 370


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 193/425 (45%), Gaps = 41/425 (9%)

Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
           +++PS VR V+                 FF W   + ++ H+P+++ EM+ L  + R  D
Sbjct: 88  AMTPSQVRAVLRAQ----AQRDARAAFEFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHD 143

Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
            A   + LM  R +      F+ L+  Y RAG    A+     M++ GCAPD    ++ +
Sbjct: 144 PARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAV 203

Query: 226 SILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
           ++L    R  +A  F + ++    +PDV+ Y  L++G C A  I +A  +   M   G  
Sbjct: 204 NVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCL 263

Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
           P+  +Y  V+  LC+  ++    ++   M + G  P+ +T+N L+    K    ++ L  
Sbjct: 264 PDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSF 323

Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
             + +      D + Y+  +   C +G++ +A +++  M+ KGC P+  T++ +     +
Sbjct: 324 LRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCR 383

Query: 405 LGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNT 464
           +G+++ A +M   M    C+PNTVT+  L+                              
Sbjct: 384 IGELDQARKMMKHMYKNGCKPNTVTHTALLNGL--------------------------- 416

Query: 465 YRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
                   C +G  + A++ + +  EE+   P +  Y +V+   RR G+L++  ++V +M
Sbjct: 417 --------CKVGKSSEAWELLNKS-EEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQM 467

Query: 525 VDRGF 529
           + +GF
Sbjct: 468 LQKGF 472



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 193/434 (44%), Gaps = 10/434 (2%)

Query: 95  SLGFSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYH 152
           +L F++      + P  V +  +I+  CG R  +  L+++S        P+ +     Y 
Sbjct: 215 ALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKIS----YF 270

Query: 153 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
            +++   K ++     + ++ M    +     T+++L+    + G A EA+      E  
Sbjct: 271 TVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGK 330

Query: 213 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEA 271
               D++ +S  +   C   R +EA+     +  K   PDV+ Y+ +V G+CR G + +A
Sbjct: 331 RFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQA 390

Query: 272 ERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRV 331
            ++ + M   G +PN  T++ +++ LC+ G+ + A ++  +  E    P++IT++ +M  
Sbjct: 391 RKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHG 450

Query: 332 HVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
             +  + ++   V  QM + G    T+  N LI   C + K  DA   +     KGC  N
Sbjct: 451 FRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFIN 510

Query: 392 ASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKK 451
              F  +    S+ GD+  A  +   M      P+ VTY +++              L +
Sbjct: 511 VVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVE 570

Query: 452 EMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
           +M    + P   TYR +I  YC  G   +    + +M+ ++     SS Y  V+++L   
Sbjct: 571 KMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGF---SSAYNQVIEKLCAF 627

Query: 512 GQLQKHEELVEKMV 525
           G+L +   L+ K++
Sbjct: 628 GKLSEANNLLSKVL 641



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/512 (21%), Positives = 189/512 (36%), Gaps = 145/512 (28%)

Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
           +AG++   D A  F + M+   V+  V T++ L++    A    +A+   + M + GC P
Sbjct: 208 VAGRI---DKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLP 264

Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKD------------------------------ 246
           DKI++  V+S LC+++R ++ Q+  + + D                              
Sbjct: 265 DKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFL 324

Query: 247 ------KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
                 +F  D + Y+  V  +C  G ++EA+ +  EM   G +P+V TYS V+D  CR 
Sbjct: 325 RESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRI 384

Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYN-------------- 346
           G++ +A  +   M + GC+PN++T   L+    K  ++ +  ++ N              
Sbjct: 385 GELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITY 444

Query: 347 ---------------------QMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
                                QM + G    T+  N LI   C + K  DA   +     
Sbjct: 445 SVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQS 504

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGA----HRMY---------------------GKMKD 420
           KGC  N   F  +    S+ GD+  A      MY                     GKMK+
Sbjct: 505 KGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKE 564

Query: 421 LKC----------EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
                         P  VTY  ++  +    + + +L L  +M   E     + Y  +I 
Sbjct: 565 ATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKE--GFSSAYNQVIE 622

Query: 471 MYCGMGHWNNAYKYIREMIE----------------------------------EKCLKP 496
             C  G  + A   + +++                                   ++ L P
Sbjct: 623 KLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIP 682

Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
              + + V  QL  AG+ Q   +L+ K V+RG
Sbjct: 683 DLKLCQKVDSQLALAGEKQAAGKLIIKFVERG 714



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 138/276 (50%), Gaps = 9/276 (3%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           ++N   KV +   AW  ++  +      +  T+S+++  + R G   E+     +M + G
Sbjct: 412 LLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKG 471

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
             P  +  +++I  LC +R+ ++A+ F +  + K    +V+ +T ++ G+ R G++  A 
Sbjct: 472 FFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESAL 531

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
            +  +M +    P+V TY++V+DAL R G++  A  +  +ML  G  P  +T+  ++  +
Sbjct: 532 SLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRY 591

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
            +    E +L + ++M  L  E  +  YN +I+  C  GKL +A  +L+ ++R     +A
Sbjct: 592 CEKGAVEDLLNLLDKM--LAKEGFSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDA 649

Query: 393 STFNMIFRCISKLG----DVNGAHRMYGK--MKDLK 422
            T +++       G      N A RM+ +  + DLK
Sbjct: 650 QTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDLK 685


>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g02420
 gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 491

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 191/364 (52%), Gaps = 16/364 (4%)

Query: 100 QISTAHSISPSTV---RHVIE---KSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHE 153
           Q+    S+S S +   + +I+   K     HG P+ Q L F+ + +A   F HS      
Sbjct: 55  QVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPI-QTLEFYRYASAIRGFYHSSFSLDT 113

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 212
           M+ + G+ R+FD  W  +   K ++   I+  T  +++ R  +     + V +F + +  
Sbjct: 114 MLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR- 172

Query: 213 GCAPD---KIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
              PD      F+ ++  LC+++  ++A++ + SLK +F+PD+  +  L+ GW    +  
Sbjct: 173 -LVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSE 228

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EAE  F EMK  G++P+V TY+ +ID  C+  +I +A+ +  +M E    P+ IT+  ++
Sbjct: 229 EAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVI 288

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
                  + +K  +V  +MK  GC  D   YN  I   C   +L DA K+++ MV+KG +
Sbjct: 289 GGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 348

Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
           PNA+T+N+ FR +S   D+  +  +Y +M   +C PNT +   L++MF   +  DM ++L
Sbjct: 349 PNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408

Query: 450 KKEM 453
            ++M
Sbjct: 409 WEDM 412


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 2/363 (0%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A     LM  R    T  T++ L+     AG+  EA+  F  M+  GCAPD   ++ ++ 
Sbjct: 126 ACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVH 185

Query: 227 ILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
            LC   R  EA++   D++ + FEP+V+VY  L+ G+C  G++  A  VF  M + G  P
Sbjct: 186 GLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSP 245

Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
           NV TY+ +I   C+  ++ RA  +F+ M++ G  PN +T+  L++      + +   ++ 
Sbjct: 246 NVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLL 305

Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
             M+  G   +  T + LID  CK  ++ +A  +L S+++KG   N   +  +   + K 
Sbjct: 306 QSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKA 365

Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
           G    A R+   +      P+  TY+ L+      K     + +  +M E  V+P+  TY
Sbjct: 366 GRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTY 425

Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
            I+I         + + K + +MI    +KP    Y + ++     G+++  E ++  MV
Sbjct: 426 TIIIDELVREVGADGSKKILDKMIAAG-IKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMV 484

Query: 526 DRG 528
           D G
Sbjct: 485 DHG 487



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 178/363 (49%), Gaps = 4/363 (1%)

Query: 148 PDLYHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAF 206
           P +Y  M++ L G  R  +      D M +   E  V  ++ L+  Y   G    AV  F
Sbjct: 177 PHVYATMVHGLCGAGRTREAETLLSDAM-AEGFEPNVVVYNALIDGYCNVGDLELAVDVF 235

Query: 207 NRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRA 265
            RM+  GC+P+   ++ +IS  C+ R+   A   F  + D    P+V+ YT L++G C  
Sbjct: 236 ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSD 295

Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
           G +  A R+ + M+ +G+ PN +T S++IDALC+  ++  A  +   +++ G + N I +
Sbjct: 296 GQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVY 355

Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
            +L+    KA R     ++   +   G   D  TY+ LID  C+  +L +A+ VL+ M+ 
Sbjct: 356 TSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMME 415

Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
           KG  P+  T+ +I   + +    +G+ ++  KM     +P+  TY I ++ +      + 
Sbjct: 416 KGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMED 475

Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
              +   M ++ V PN+ TY  LI  Y  +G  + A+   + M+   C KP    Y ++L
Sbjct: 476 AEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGC-KPNEESYTVLL 534

Query: 506 QQL 508
           + L
Sbjct: 535 RLL 537



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 20/402 (4%)

Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
           SP++  Y E+I+   K R+ D A      M    +   V T++ L++     G    A  
Sbjct: 244 SPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYR 303

Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
               ME  G  P++   S++I  LC+  R  EAQ    SL  K  + + IVYT+L+ G C
Sbjct: 304 LLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLC 363

Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
           +AG  + A+R+ + +   G  P+ +TYS +ID LCR  +++ A  V  +M+E G +P+ +
Sbjct: 364 KAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPV 423

Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
           T+  ++   V+    +   ++ ++M   G + D  TY   +  +C +G++EDA  ++  M
Sbjct: 424 TYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHM 483

Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
           V  G  PN  T+N +    + LG  + A   +  M    C+PN  +Y +L+++    +S+
Sbjct: 484 VDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESS 543

Query: 444 DMVLK----------------LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIRE 487
           + +                  L +EM + ++   ++ Y   +T  C +   + A   + E
Sbjct: 544 NNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIE 603

Query: 488 MIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
           M +   L P   VY  ++    R   L +    V+ MV  G+
Sbjct: 604 M-QSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGY 644



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 2/346 (0%)

Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
            ++  V  Y RAGL A A   F  M   GC      ++ ++  LC      EA S F  +
Sbjct: 109 AYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGM 168

Query: 245 K-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           + D   PD  VY  +V G C AG   EAE +  +    G +PNV  Y+ +ID  C  G +
Sbjct: 169 QADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDL 228

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A DVF  M   GC PN  T+  L+    K+ + ++ + ++++M   G   + +TY  L
Sbjct: 229 ELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTAL 288

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           I   C DG+L+ A ++L SM   G  PN  T +++   + K   V  A  + G +     
Sbjct: 289 IQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGI 348

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
           + N + Y  L+     +       +L + +      P+ +TY  LI   C     + A  
Sbjct: 349 KVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAML 408

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
            + +M+ EK ++P    Y +++ +L R       +++++KM+  G 
Sbjct: 409 VLDDMM-EKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 1/287 (0%)

Query: 244 LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
           L+  F PD   YT+ V G+CRAG ++ A R+F  M + G     +TY+ ++  LC  G +
Sbjct: 99  LRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMV 158

Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
             A  VFA M   GC P+   +  ++     A RT +   + +     G E + + YN L
Sbjct: 159 REAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNAL 218

Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
           ID +C  G LE A+ V   M   GC+PN  T+  +     K   ++ A  ++ +M D   
Sbjct: 219 IDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGL 278

Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
            PN VTY  L+Q   +    D   +L + ME + + PN  T  +LI   C       A  
Sbjct: 279 VPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQL 338

Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
            +  +I +K +K    VY  ++  L +AG+    + L++ +V +GF 
Sbjct: 339 LLGSLI-QKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFV 384



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/368 (21%), Positives = 142/368 (38%), Gaps = 52/368 (14%)

Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
           +Y  +I+   K  +F  A   +  + S+       T+S L+    R    +EA+   + M
Sbjct: 354 VYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM 413

Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
            E G  P  + ++I+I  L R+  A  ++   D +     +PDV  YT  VR +C  G +
Sbjct: 414 MEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRM 473

Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
            +AE +   M   G+ PN+ TY+ +I      G  ++A   F  M+  GC+PN  ++  L
Sbjct: 474 EDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVL 533

Query: 329 MRVHVKASRTEKV-------------------------------LQVYNQMKRLGCEADT 357
           +R+ +K   +  +                               + +YN      C  D 
Sbjct: 534 LRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDR 593

Query: 358 I--------------------TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
           +                     Y  +I C C+   L +A+  ++SMV+ G  P   ++  
Sbjct: 594 LDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRH 653

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
           I   + + G +  A +++G M   +     + + IL+              L   MEE  
Sbjct: 654 IISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKN 713

Query: 458 VEPNVNTY 465
             P+   Y
Sbjct: 714 YRPSDALY 721



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 110/260 (42%), Gaps = 20/260 (7%)

Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
           A H +  M    V   + T++ L+  Y   GL ++A   F  M   GC P++ ++++++ 
Sbjct: 476 AEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535

Query: 227 ILCRKR-------------RASEAQSFFDSLKD----KFEPDVIVYTNLVRGWCRAGNIS 269
           +L +K              + +E +     L++    +   ++ +Y   +   CR   + 
Sbjct: 536 LLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLD 595

Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
           EA+ +  EM+ A + P+   Y+ +I   CR   +T A      M++ G  P   ++ +++
Sbjct: 596 EAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHII 655

Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
               +    +   QV+  M       + I +  LID   + G + +   +L+ M  K   
Sbjct: 656 SSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYR 715

Query: 390 PNASTFNMIFRCISKLGDVN 409
           P+ + +    R   K+ D N
Sbjct: 716 PSDALYA---RLTGKITDAN 732


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 201/442 (45%), Gaps = 44/442 (9%)

Query: 132 LSFFNWVTA--RPEFVHSPDLYHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSI 188
           L FF WVT   R E +H+    + ++    K R+   A+  F D +  ++ +    T++ 
Sbjct: 51  LFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNT 110

Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
           L+  + +AG    A      M+E G +PD +  S ++  LC     S A  +F   ++  
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF---RESV 167

Query: 249 E--PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
           E  PD +++  LV G C+A  +SEA ++  EM   GI P+V TY+ +ID LC+  ++  A
Sbjct: 168 ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEA 227

Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
             +   M++    PN +T+N L+  + K   T    Q+  +M + G   D +T+N LI  
Sbjct: 228 RQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISG 287

Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
            C+  K++ A +VL+ M +  C PN  T+N++   +   G  N A  +  +M      P+
Sbjct: 288 FCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPD 347

Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
            +TYN L+ +F  +   +   +++  M E  V P+  +Y  L         ++ A+  + 
Sbjct: 348 IITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLD 407

Query: 487 EMIEEKCL----------------------------------KPGSSVYEMVLQQLRRAG 512
            M +   +                                   P +S YE+++  L +AG
Sbjct: 408 NMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAG 467

Query: 513 QLQKHEELVEKMVDRGFTARPL 534
           ++   +E++  MV  G   +PL
Sbjct: 468 RVDDAKEVLVMMVSEGI--QPL 487



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 179/384 (46%), Gaps = 10/384 (2%)

Query: 135 FNWVTARPEFVHSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDT--FSILV 190
           F  +    E  HSPD+  +  ++           A  +       +VE   D+  F+ILV
Sbjct: 125 FQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF----RESVECAPDSVLFNILV 180

Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFE 249
               +A   +EA      M E G  PD + ++ +I  LC+  R  EA+   +++ K K  
Sbjct: 181 HGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVR 240

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
           P+++ Y  L+ G+C+ G    A ++   M  +G  P+V T++ +I   C+  +I +A +V
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV 300

Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
              M +  C PN +T+N L+     A R  +  ++ ++M   G   D ITYN LI   C+
Sbjct: 301 LHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCR 360

Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
           + ++E A ++ N MV +G  P+  ++  +   + K    + A  +   M D    PN  T
Sbjct: 361 NFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFT 420

Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
           +N LM+    S+  D    L   M     +P  +TY +L+T  C  G  ++A + +  M+
Sbjct: 421 FNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMV 480

Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQ 513
            E  ++P  S    ++  L R G+
Sbjct: 481 SEG-IQPLVSSSGTIVHTLAREGK 503


>gi|125539212|gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
          Length = 538

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 165/342 (48%), Gaps = 6/342 (1%)

Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
           ++ LV     AG   EA+ AF+ M   G AP+  + +I+I +  R+     A       K
Sbjct: 97  YNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIH--K 154

Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
              EPDV  Y+ L+ G CRAG + EA  V   M     +P V TY+ ++ A CR G+I  
Sbjct: 155 SGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVE 214

Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
           A  + AEM  +GC PN +T+N L+R      + ++V QV  +      +  T+TYN  ++
Sbjct: 215 AKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMN 274

Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
             CK GK ++A+++L+ M+ +G  P A T++++  C+     +  A  +  +  +LK   
Sbjct: 275 GLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYA 334

Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
             V YN +M           ++KL  +M +  +EPN  T+ ILI   C  G  + A    
Sbjct: 335 GVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLA---- 390

Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
           + +I  +        Y ++L      G+L +   L+  M ++
Sbjct: 391 KSLIHSQGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEK 432



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 7/321 (2%)

Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
           +I +  +  +FDLAW   +L+    VE  V T+S L+    RAG   EA    + M E  
Sbjct: 135 LIKMHARRSEFDLAW---ELIHKSGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKN 191

Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAE 272
           C P    ++ ++   CR  R  EA+     ++     P+V+ Y  L+R  C      E E
Sbjct: 192 CRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVE 251

Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
           +V  E      +P+  TY+I ++ LC+ G+   A ++   ML  G EP + T++ L+   
Sbjct: 252 QVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCL 311

Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
             +SR    + +  +   L   A  + YN ++   C+ GK    +K+L  M++KG  PN 
Sbjct: 312 CHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNT 371

Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
            TFN++ R +   G  + A  +   +       N VTYNIL+  F          +L   
Sbjct: 372 RTFNILIRSLCVGGKSSLAKSL---IHSQGFAANVVTYNILLHWFYYHGKLTEANRLISV 428

Query: 453 MEENEVEPNVNTYRILITMYC 473
           MEE  + P+  TY I+I   C
Sbjct: 429 MEEKNIAPDEVTYTIIIDGLC 449



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 7/288 (2%)

Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
           AGKV +   AW  +D M  +N    V T++ +V+ Y R G   EA      ME  GC P+
Sbjct: 174 AGKVVE---AWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPN 230

Query: 218 KIAFSIVISILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
            + ++++I  LC   +  E  Q   +S    ++P  + Y   + G C+ G   EA  +  
Sbjct: 231 VVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLD 290

Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
            M   G++P  YT+SI+++ LC   ++  A  +     E+      + +N +M    +  
Sbjct: 291 VMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMG 350

Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
           +   ++++   M + G E +T T+N LI   C  GK   A  +++S   +G   N  T+N
Sbjct: 351 KWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHS---QGFAANVVTYN 407

Query: 397 MIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
           ++       G +  A+R+   M++    P+ VTY I++      +  D
Sbjct: 408 ILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFD 455



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 133/314 (42%), Gaps = 36/314 (11%)

Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPN----------------------- 286
           P+V+ Y  LV     AG   EA + F EM  +G+ PN                       
Sbjct: 92  PNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWEL 151

Query: 287 ---------VYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
                    V TYS +I  LCR G++  A  V   MLE  C P   T+  +++ + +  R
Sbjct: 152 IHKSGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGR 211

Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
             +   +  +M+RLGC  + +TYN LI   C D K ++  +VL     K   P+  T+N+
Sbjct: 212 IVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNI 271

Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
               + K G    A  +   M     EP   T++IL+     S      + L +   E +
Sbjct: 272 YMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELK 331

Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
               V  Y  +++  C MG W    K + +MI +K ++P +  + ++++ L   G+    
Sbjct: 332 WYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMI-KKGIEPNTRTFNILIRSLCVGGKSSLA 390

Query: 518 EELVEKMVDRGFTA 531
           + L+     +GF A
Sbjct: 391 KSLIHS---QGFAA 401



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 11/274 (4%)

Query: 265 AGNISEAERVFREMKM-------AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
           AG++ E   VF E+K         G  PNV  Y+ +++AL   G+   A   F EML  G
Sbjct: 65  AGDVDEVVAVFSELKWTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASG 124

Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
             PN+ + N L+++H + S  +   ++   + + G E D  TY+ LI   C+ GK+ +A 
Sbjct: 125 VAPNASSQNILIKMHARRSEFDLAWEL---IHKSGVEPDVGTYSTLIAGLCRAGKVVEAW 181

Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
            VL+ M+ K C P   T+  I +   + G +  A  +  +M+ L C PN VTYN+L++  
Sbjct: 182 GVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRAL 241

Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
                 D V ++  E    + +P+  TY I +   C  G    A + +  M+ E  L+P 
Sbjct: 242 CDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEG-LEPT 300

Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
           +  + ++L  L  + +L     L+E+  +  + A
Sbjct: 301 AYTWSILLNCLCHSSRLLDAIYLLERSTELKWYA 334


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.135    0.405 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,020,815,638
Number of Sequences: 23463169
Number of extensions: 325206050
Number of successful extensions: 1044889
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8508
Number of HSP's successfully gapped in prelim test: 4431
Number of HSP's that attempted gapping in prelim test: 836835
Number of HSP's gapped (non-prelim): 68899
length of query: 534
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 387
effective length of database: 8,910,109,524
effective search space: 3448212385788
effective search space used: 3448212385788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)