BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009470
(534 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/540 (70%), Positives = 447/540 (82%), Gaps = 9/540 (1%)
Query: 1 MALIKSNHRLPFSLS---QQIPKAYSFFSS--LAPLNEDDDGDCVTNPNSSPDTPFLSPE 55
MAL++S L +LS +PK +S ++ L+ D+ +T S P +P L+PE
Sbjct: 1 MALLRSKLHLSRTLSFISPLLPKTFSTSATSLLSDHENDESAATITAAVSVPISPLLTPE 60
Query: 56 ETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHV 115
+T EKFHS+IKDH+RKNP +S ++ LNP T+ +LSL FSQI T+ +SPS VR V
Sbjct: 61 DTQTVEKFHSIIKDHYRKNP--TSPNDAILNPSLTLHALSLDFSQIETSQ-VSPSVVRCV 117
Query: 116 IEKSCGVRHGIPLLQVLSFFNWVTARPEFVH-SPDLYHEMINLAGKVRQFDLAWHFIDLM 174
IEK VRHGIPL Q L+FFNW T+R ++ H SP Y+EMI+L+GKVRQFDLAWH IDLM
Sbjct: 118 IEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLM 177
Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
KSRNVEI+++TF+IL+RRYVRAGLA+EAVH FNRME+YGC PDKIAFSIVIS L RKRRA
Sbjct: 178 KSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRA 237
Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
SEAQSFFDSLKD+FEPDVIVYTNLVRGWCRAG ISEAE+VF+EMK+AGI+PNVYTYSIVI
Sbjct: 238 SEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVI 297
Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
DALCRCGQI+RAHDVFA+ML+ GC PN+ITFNNLMRVHVKA RTEKVLQVYNQMK+LGCE
Sbjct: 298 DALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357
Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
DTITYNFLI+ HC+D LE+A+KVLN+M++K C NASTFN IFR I K DVNGAHRM
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM 417
Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
Y KM + KCEPNTVTYNILM+MF SKSTDMVLK+KKEM++ EVEPNVNTYR+L+TM+CG
Sbjct: 418 YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 477
Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARPL 534
MGHWNNAYK +EM+EEKCL P S+YEMVL QLRRAGQL+KHEELVEKM+ +G ARPL
Sbjct: 478 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 220/396 (55%), Gaps = 3/396 (0%)
Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
L FF W + + HS YH MI K+RQ+ L W I+ M+ + + + V+TF I
Sbjct: 115 LLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCI 173
Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
++R+Y RA EA++AFN ME+Y P+ +AF+ ++S LC+ + +AQ F++++D+F
Sbjct: 174 VMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF 233
Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
PD Y+ L+ GW + N+ +A VFREM AG P++ TYSI++D LC+ G++ A
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
+ M C+P + ++ L+ + +R E+ + + +M+R G +AD +N LI C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
K ++++ +VL M KG PN+ + N+I R + + G+ + A ++ KM + CEP+
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDAD 412
Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
TY ++++MF K + K+ K M + V P+++T+ +LI C A + EM
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472
Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
IE ++P + + Q L + + + L EKM
Sbjct: 473 IEMG-IRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 221/421 (52%), Gaps = 15/421 (3%)
Query: 107 ISPSTVRHVIEK--SCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQF 164
+SP+ + V++K + GV LS F W + F H+ Y+ +I GK++QF
Sbjct: 92 LSPALIEEVLKKLSNAGV-------LALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144
Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
L W +D MK++ + ++ +TF+++ RRY RA EA+ AF++MEE+G + F+ +
Sbjct: 145 KLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRM 203
Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
+ L + R +AQ FD +K K FEPD+ YT L+ GW + N+ + V REMK G
Sbjct: 204 LDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGF 263
Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
+P+V Y I+I+A C+ + A F EM + C+P+ F +L+ + L+
Sbjct: 264 EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323
Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
+ + K G + TYN L+ +C ++EDA K ++ M KG PNA T+++I +
Sbjct: 324 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
++ A+ +Y M CEP TY I+++MF + DM +K+ EM+ V P ++
Sbjct: 384 RMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
+ LIT C + A +Y EM++ PG ++ + Q L G+ K +LV K
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPG-HMFSRLKQTLLDEGRKDKVTDLVVK 499
Query: 524 M 524
M
Sbjct: 500 M 500
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
MK E V + I++ + +A EA+ FN ME+ C P F +I+ L +++
Sbjct: 258 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 317
Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
++A FF+ K F + Y LV +C + + +A + EM++ G+ PN TY I
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
++ L R + A++V+ M CEP T+ ++R+ R + ++++++MK G
Sbjct: 378 ILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 434
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
++ LI C + KL++A + N M+ G P F+ + + + G +
Sbjct: 435 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVT 494
Query: 413 RMYGKMKDLK 422
+ KM L+
Sbjct: 495 DLVVKMDRLR 504
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 130 QVLSFFNWVTAR---PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTF 186
+ + FFN + R P SP ++ +IN G ++ + A F + KS + T+
Sbjct: 285 EAIRFFNEMEQRNCKP----SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
+ LV Y + +A + M G P+ + I++ L R +R+ EA + ++
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS- 399
Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
EP V Y +VR +C + A +++ EMK G+ P ++ +S +I ALC ++ A
Sbjct: 400 -CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458
Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
+ F EML+VG P F+ L + + R +KV + +M RL
Sbjct: 459 CEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 227/458 (49%), Gaps = 27/458 (5%)
Query: 61 EKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSC 120
EK + ++++HH + +P L L ++ + + P + V+ + C
Sbjct: 68 EKIYRILRNHHSR-----------------VPKLELALNE--SGIDLRPGLIIRVLSR-C 107
Query: 121 GVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE 180
G + FF W T +P + HS ++ M+ + K+RQF W I+ M+ N E
Sbjct: 108 GDAGNLGY----RFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPE 163
Query: 181 -ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
I + F +L+RR+ A + +AV + M +YG PD+ F ++ LC+ EA
Sbjct: 164 LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 223
Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
F+ +++KF P++ +T+L+ GWCR G + EA+ V +MK AG++P++ ++ ++
Sbjct: 224 VFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 283
Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA-SRTEKVLQVYNQMKRLGCEADTI 358
G++ A+D+ +M + G EPN + L++ + R ++ ++V+ +M+R GCEAD +
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
TY LI CK G ++ VL+ M +KG P+ T+ I K + KM
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
Query: 419 KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHW 478
K C P+ + YN+++++ ++L EME N + P V+T+ I+I + G
Sbjct: 404 KRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFL 463
Query: 479 NNAYKYIREMIEEKCLK-PGSSVYEMVLQQLRRAGQLQ 515
A + +EM+ P + +L L R +L+
Sbjct: 464 IEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 42/309 (13%)
Query: 224 VISILCRKRRASEAQSFFDSLKDKFEPDVI---VYTNLVRGWCRAGNISEAERVFREMKM 280
++ IL + R+ + ++ K P++I ++ L+R + A + +A V EM
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMR-KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK 195
Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
G++P+ Y + ++DALC+ G + A VF +M E PN F +L+
Sbjct: 196 YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLL----------- 243
Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFR 400
Y + C++GKL +A +VL M G P+ F +
Sbjct: 244 -------------------YGW-----CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 279
Query: 401 CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFA-TSKSTDMVLKLKKEMEENEVE 459
+ G + A+ + M+ EPN Y +L+Q T K D +++ EME E
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCE 339
Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
++ TY LI+ +C G + Y + +M +K + P Y ++ + Q ++ E
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDM-RKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 520 LVEKMVDRG 528
L+EKM RG
Sbjct: 399 LIEKMKRRG 407
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y +++ K QF+ I+ MK R + +++++R + G EAV +N ME
Sbjct: 380 YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTNLVRGWCRAGN 267
G +P F I+I+ + EA + F + + P +L+ R
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDK 499
Query: 268 ISEAERVFREM--KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
+ A+ V+ + K + + NV ++I I AL G + A +M+E+ P T+
Sbjct: 500 LEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTY 559
Query: 326 NNLMR-------VHVKASRTEKVLQVYNQ 347
LM+ + A TEKV+++ ++
Sbjct: 560 AKLMKGLNKLYNRTIAAEITEKVVKMASE 588
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 121/329 (36%), Gaps = 50/329 (15%)
Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
FS ++ +L K+ +S+A S D + +F ++ + V R + E +
Sbjct: 4 FSTIVDLLISKKPSSQANSRIDLICKRFHISRVLNNDFVESTERKNGVGLVCPEKHEDEF 63
Query: 281 AGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
AG +Y +I R H LE+ + I + + V
Sbjct: 64 AGEVEKIY-------------RILRNHHSRVPKLELALNESGIDLRPGLIIRV------- 103
Query: 341 VLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL------EDAIKVLNSMVRKGC------ 388
+ R G +A + Y F + + G + + +L+ M + G
Sbjct: 104 -------LSRCG-DAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIE 155
Query: 389 -----NPNA---STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATS 440
NP F ++ R + V A + +M EP+ + L+ +
Sbjct: 156 EMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKN 215
Query: 441 KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSV 500
S K+ ++M E + PN+ + L+ +C G A + + +M +E L+P V
Sbjct: 216 GSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQM-KEAGLEPDIVV 273
Query: 501 YEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
+ +L AG++ +L+ M RGF
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 205/400 (51%), Gaps = 8/400 (2%)
Query: 91 IPSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL 150
+P L L ++ + + P + V+ + CG + FF W +P + HS ++
Sbjct: 97 VPKLELALNE--SGVELRPGLIERVLNR-CGDAGNLGY----RFFVWAAKQPRYCHSIEV 149
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
Y M+ + K+RQF W I+ M+ N + I + F +LV+R+ A + +A+ + M
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 209
Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
++G PD+ F ++ LC+ +A F+ ++ +F ++ +T+L+ GWCR G +
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMM 269
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
EA+ V +M AG +P++ Y+ ++ G++ A+D+ +M G EPN+ + L+
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
+ K R E+ ++V+ +M+R CEAD +TY L+ CK GK++ VL+ M++KG
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
P+ T+ I K + KM+ ++ P+ YN+++++ ++L
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
EMEEN + P V+T+ I+I G A + +EM+
Sbjct: 450 WNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 151/355 (42%), Gaps = 40/355 (11%)
Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
M E + ++ L+ Y AG A+A M G P+ ++++I LC+ R
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 234 ASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
EA F + + + E DV+ YT LV G+C+ G I + I
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC-------------------YI 378
Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
V+D +M++ G P+ +T+ ++M H K E+ L++ +M+++
Sbjct: 379 VLD----------------DMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
D YN +I CK G++++A+++ N M G +P TF ++ ++ G + A
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482
Query: 413 RMYGKM--KDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM-EENEVEPNVNTYRILI 469
+ +M + L T +L+ K +M + + + E NV ++ I I
Sbjct: 483 DHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWI 542
Query: 470 TMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
G+ A Y EMIE + P + +++ L++ + E+ EK+
Sbjct: 543 HALFSKGYEKEACSYCIEMIEMDFM-PQPDTFAKLMKGLKKLYNREFAGEITEKV 596
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 171 IDLM-KSRNVEITVDT--FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
++LM K R +E D +++++R + G EAV +N MEE G +P F I+I+
Sbjct: 412 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNL---VRGWCRAGNISEAERVFREMKMAGI- 283
L + EA F + + V Y L + + + A+ V+ + G
Sbjct: 472 LASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGAC 531
Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
+ NV +++I I AL G A EM+E+ P TF LM+ K E +
Sbjct: 532 ELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGE 591
Query: 344 VYNQMKRLGCEAD 356
+ +++ + E +
Sbjct: 592 ITEKVRNMAAERE 604
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 229/466 (49%), Gaps = 14/466 (3%)
Query: 63 FHSLIKDHHRKNPNPS-SNSNPSLNPDFTIPSLSLGFSQISTAHSISPSTVRHVIEKSCG 121
F +L+ D P+P N + D P L + ++ + +S + V V+++
Sbjct: 25 FSTLLHD----PPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKN 80
Query: 122 VRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN-VE 180
+ G P + FF W P+F HS + YH ++ + G +QF L W F+ + N E
Sbjct: 81 L--GFPAHR---FFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFE 135
Query: 181 ITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF 240
I+ F I+ R Y RA L +EA AFNRM E+G P ++ LC K+ + AQ F
Sbjct: 136 ISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF 195
Query: 241 FDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
F K P Y+ LVRGW R + S A +VF EM ++ Y+ ++DALC+
Sbjct: 196 FGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCK 255
Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
G + + +F EM +G +P++ +F + + A +V ++MKR + T
Sbjct: 256 SGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYT 315
Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
+N +I CK+ K++DA +L+ M++KG NP+ T+N I +VN A ++ +M
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI-TMYCGMGHW 478
KC P+ TYN+++++ D ++ + M E + P V TY ++I + G
Sbjct: 376 RTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKL 435
Query: 479 NNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
A +Y MI+E + P S+ EM+ +L GQ+ + L KM
Sbjct: 436 EEACRYFEMMIDEG-IPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 213/402 (52%), Gaps = 6/402 (1%)
Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
LS + ++ P+ V + + + +GK++Q A +D M R+ V T++IL+
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCD-SGKLKQ---AMEVLDRMLQRDCYPDVITYTILIE 247
Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEP 250
R A+ + M + GC PD + ++++++ +C++ R EA F + + +P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
+VI + ++R C G +AE++ +M G P+V T++I+I+ LCR G + RA D+
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
+M + GC+PNS+++N L+ K + ++ ++ +M GC D +TYN ++ CKD
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
GK+EDA+++LN + KGC+P T+N + ++K G A ++ +M+ +P+T+TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
+ L+ + D +K E E + PN T+ ++ C + A ++ MI
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 491 EKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
C KP + Y ++++ L G ++ EL+ ++ ++G +
Sbjct: 548 RGC-KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 172/338 (50%), Gaps = 3/338 (0%)
Query: 187 SILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD 246
+ L+R + R G +A +E G PD I ++++IS C+ + A S D +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-- 198
Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
PDV+ Y ++R C +G + +A V M P+V TY+I+I+A CR + A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
+ EM + GC P+ +T+N L+ K R ++ ++ N M GC+ + IT+N ++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
C G+ DA K+L M+RKG +P+ TFN++ + + G + A + KM C+PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
+++YN L+ F K D ++ + M P++ TY ++T C G +A + +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
++ + C P Y V+ L +AG+ K +L+++M
Sbjct: 439 QLSSKGC-SPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 170/340 (50%), Gaps = 5/340 (1%)
Query: 190 VRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE 249
+R+ VR G E M +G PD I + +I CR + +A + L+
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 250 -PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
PDVI Y ++ G+C+AG I+ A V M + P+V TY+ ++ +LC G++ +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
V ML+ C P+ IT+ L+ + S +++ ++M+ GC D +TYN L++ C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
K+G+L++AIK LN M GC PN T N+I R + G A ++ M P+ V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
T+NIL+ + + ++M ++ +PN +Y L+ +C + A +Y+ M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
+ C P Y +L L + G+++ E++ ++ +G
Sbjct: 406 VSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 4/294 (1%)
Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
S + S+ F + + N +R R G + E + M G P++ + +I
Sbjct: 85 SNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLI 144
Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
CR G+ +A + + G P+ IT+N ++ + KA L V + R+
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVS 201
Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
D +TYN ++ C GKL+ A++VL+ M+++ C P+ T+ ++ + V A ++
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
+M+D C P+ VTYN+L+ D +K +M + +PNV T+ I++ C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
G W +A K + +M+ K P + +++ L R G L + +++EKM G
Sbjct: 322 TGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
+ R G++ M+ G P+ I L+R + +T K ++ ++ G D
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
ITYN +I +CK G++ +A+ VL+ M +P+ T+N I R + G + A +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
+M C P+ +TY IL++ +KL EM + P+V TY +L+ C G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
+ A K++ +M C +P + ++L+ + G+ E+L+ M+ +GF+
Sbjct: 289 RLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 188/363 (51%), Gaps = 4/363 (1%)
Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLA 167
+P+ V V+++ HG LQ F + E+VH + I++A ++
Sbjct: 55 TPNLVNSVLKRLWN--HGPKALQFFHFLD--NHHREYVHDASSFDLAIDIAARLHLHPTV 110
Query: 168 WHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI 227
W I M+S + + TF+I+ RY AG +AV F M E+GC D +F+ ++ +
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 228 LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
LC+ +R +A F +L+ +F D + Y ++ GWC +A V +EM GI PN+
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
TY+ ++ R GQI A + F EM + CE + +T+ ++ A ++ V+++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
M R G TYN +I CK +E+A+ + MVR+G PN +T+N++ R + G+
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
+ + +M++ CEPN TYN++++ ++ + L L ++M + PN++TY I
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 468 LIT 470
LI+
Sbjct: 411 LIS 413
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 2/251 (0%)
Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
M+ I P+ T++IV + G+ +A +F M E GC + +FN ++ V K+ R
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
EK +++ + R DT+TYN +++ C + A++VL MV +G NPN +T+N
Sbjct: 177 VEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
+ + + G + A + +MK CE + VTY ++ F + + EM
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
V P+V TY +I + C + NA EM+ + +P + Y ++++ L AG+ +
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMV-RRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 518 EELVEKMVDRG 528
EEL+++M + G
Sbjct: 355 EELMQRMENEG 365
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 158 AGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPD 217
AG++R AW F MK R+ EI V T++ +V + AG A + F+ M G P
Sbjct: 243 AGQIRH---AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 218 KIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFR 276
++ +I +LC+K A F+ + + +EP+V Y L+RG AG S E + +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA------------------------- 311
M+ G +PN TY+++I C ++ +A +F
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419
Query: 312 -------------EMLEVGCEPNSITFNNLM 329
EM+E G P TFN ++
Sbjct: 420 RSEDMVVAGKLLLEMVERGFIPRKFTFNRVL 450
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 228/440 (51%), Gaps = 28/440 (6%)
Query: 106 SISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD 165
S++P+ + + + +RH + LSFF ++ + P +P ++ +I++ G+VRQFD
Sbjct: 68 SLTPNLIHQTLLR---LRHNSKI--ALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFD 122
Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK-----IA 220
+ I M + + +TF ILV+R + AGL +AV AF+ + C + +
Sbjct: 123 VVRQLIVEMD----QTSPETFLILVKRLIAAGLTRQAVRAFD---DAPCFLENRRFRLVE 175
Query: 221 FSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKM 280
F ++ LC+ A F+ K++F D VYT L+ GWC+ I AE+ EM
Sbjct: 176 FGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIE 235
Query: 281 AGIQPNVYTYSIVIDALCRCGQ----------ITRAHDVFAEMLEVGCEPNSITFNNLMR 330
+GI+PNV TY+++++ +CR + A VF EM + G EP+ +F+ ++
Sbjct: 236 SGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLH 295
Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 390
++ +A + E L MK G TY ++ C C G+LE+A ++L +MV G +P
Sbjct: 296 MYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISP 355
Query: 391 NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 450
+++T+N F+ D NGA +Y KMK+ C+P+T TYN+L+ F + V ++
Sbjct: 356 SSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIW 415
Query: 451 KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
+++ +E P++++Y L+ C W A Y EMIE L P +E + + L +
Sbjct: 416 DDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFL-PQKLTFETLYKGLIQ 474
Query: 511 AGQLQKHEELVEKMVDRGFT 530
+ +++ L +K+ + T
Sbjct: 475 SNKMRTWRRLKKKLDEESIT 494
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 194/379 (51%), Gaps = 2/379 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ +I+ ++ + A H + LM+ + V ++S +V Y R G + M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQ-SFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
G P+ + +I +LCR + +EA+ +F + ++ PD +VYT L+ G+C+ G+I
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
A + F EM I P+V TY+ +I C+ G + A +F EM G EP+S+TF L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
+ KA + +V+N M + GC + +TY LID CK+G L+ A ++L+ M + G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
PN T+N I + K G++ A ++ G+ + +TVTY LM + S D ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
KEM ++P + T+ +L+ +C G + K + M+ K + P ++ + +++Q
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYC 607
Query: 510 RAGQLQKHEELVEKMVDRG 528
L+ + + M RG
Sbjct: 608 IRNNLKAATAIYKDMCSRG 626
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 195/424 (45%), Gaps = 39/424 (9%)
Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
++PD+ Y ++N + + D W I++MK + ++ + ++ R AEA
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK---------------- 247
AF+ M G PD + ++ +I C++ A FF + +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 248 --------------------FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNV 287
EPD + +T L+ G+C+AG++ +A RV M AG PNV
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
TY+ +ID LC+ G + A+++ EM ++G +PN T+N+++ K+ E+ +++ +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
+ G ADT+TY L+D +CK G+++ A ++L M+ KG P TFN++ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 408 VNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRI 467
+ ++ M PN T+N L++ + + + K+M V P+ TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 468 LITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
L+ +C + A+ +EM + K S Y ++++ + + + E+ ++M
Sbjct: 637 LVKGHCKARNMKEAWFLFQEM-KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 528 GFTA 531
G A
Sbjct: 696 GLAA 699
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 188/455 (41%), Gaps = 57/455 (12%)
Query: 131 VLSFFNWVTARPE------------FVHSPDLYHEMINLAG-----KVRQFDLAWHFIDL 173
VL FF+W +R + V S DL ++ K+ D F DL
Sbjct: 104 VLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 163
Query: 174 MKSRNVEITVD--TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRK 231
+ + D F + + V GL EA F +M YG + ++ ++ L +
Sbjct: 164 LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223
Query: 232 --RRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
+ A+ F + + +V Y ++ C+ G I EA + M++ G P+V +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
YS V++ CR G++ + + M G +PNS + +++ + + + + + +++M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 350 RLGCEADTITYNFLIDCHCKDGKLE----------------------------------- 374
R G DT+ Y LID CK G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 375 DAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
+A K+ + M KG P++ TF + K G + A R++ M C PN VTY L+
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 435 QMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCL 494
D +L EM + ++PN+ TY ++ C G+ A K + E E L
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGL 522
Query: 495 KPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
+ Y ++ ++G++ K +E++++M+ +G
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 3/255 (1%)
Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
SP++ Y +I+ K D A + M ++ + T++ +V ++G EAV
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
E G D + ++ ++ C+ +AQ + K +P ++ + L+ G+C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
G + + E++ M GI PN T++ ++ C + A ++ +M G P+
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
T+ NL++ H KA ++ ++ +MK G TY+ LI K K +A +V + M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 384 VRKGCNPNASTFNMI 398
R+G + F+
Sbjct: 693 RREGLAADKEIFDFF 707
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y +++ K + D A + M + ++ T+ TF++L+ + G+ + N M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
G AP+ F+ ++ C + A + + D PD Y NLV+G C+A N+
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
EA +F+EMK G +V TYS++I + + A +VF +M G + F+
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
K R + ++ D I N+L+D
Sbjct: 709 DTKYKGKRPDTIVD----------PIDEIIENYLVD 734
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 191/386 (49%), Gaps = 2/386 (0%)
Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
F S Y ++ GK R D + M++ ++ V TF+I +R RAG EA
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGW 262
RM++ GC PD + ++++I LC R+ A+ F+ +K + +PD + Y L+ +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNS 322
++ ++ + EM+ G P+V T++I++DALC+ G A D M + G PN
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 323 ITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS 382
T+N L+ ++ R + L+++ M+ LG + TY ID + K G A++
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
M KG PN N ++K G A +++ +KD+ P++VTYN++M+ ++
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
D +KL EM EN EP+V LI + A+K M E K LKP Y
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK-LKPTVVTYN 577
Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
+L L + G++Q+ EL E MV +G
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 185/422 (43%), Gaps = 75/422 (17%)
Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
T++++++ Y + G EA+ + M E GC PD I + +I+ L + R EA F +
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
K+ K +P V+ Y L+ G + G I EA +F M G PN T++ + D LC+ ++
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR------------- 350
T A + +M+++GC P+ T+N ++ VK + ++ + ++QMK+
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684
Query: 351 -------LGCEADTITYNFLIDCH-------------------------------CKDGK 372
L +A I NFL +C +G
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 373 LEDAIKVLNSMVRKGC---------------------NPNASTFNMIFRCISKLGDVNGA 411
D +L ++R C P T+N++ + + + A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
++ ++K C P+ TYN L+ + S D + +L KEM +E E N T+ I+I+
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
G+ ++A +++ ++ P + Y ++ L ++G+L + ++L E M+D G
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG--C 922
Query: 532 RP 533
RP
Sbjct: 923 RP 924
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 2/285 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ +I +V + D A M+S V+ T T+ + + Y ++G + A+ F +M+
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIS 269
G AP+ +A + + L + R EA+ F LKD PD + Y +++ + + G I
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
EA ++ EM G +P+V + +I+ L + ++ A +F M E+ +P +T+N L+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
K + ++ ++++ M + GC +TIT+N L DC CK+ ++ A+K+L M+ GC
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM 434
P+ T+N I + K G V A + +MK L P+ VT L+
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLL 684
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 4/338 (1%)
Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
F K V+ + T+++L+ + A + A F +++ GC PD ++ ++
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 230 RKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE-MKMAGIQPNV 287
+ + E + + + E + I + ++ G +AGN+ +A ++ + M P
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 288 YTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQ 347
TY +ID L + G++ A +F ML+ GC PN +N L+ KA + ++ +
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 348 MKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGD 407
M + G D TY+ L+DC C G++++ + + G NP+ +N+I + K
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 408 VNGAHRMYGKMKDLK-CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
+ A ++ +MK + P+ TYN L+ + + K+ E++ +EPNV T+
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
LI Y G +AY + M+ P + YE +
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGG-FSPNTGTYEQL 1108
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 6/314 (1%)
Query: 222 SIVISIL---CRKRRASEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFR 276
SI++ I+ C+ S A++ F+ +P + Y L+ G A I A+ VF
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFL 809
Query: 277 EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
++K G P+V TY+ ++DA + G+I +++ EM CE N+IT N ++ VKA
Sbjct: 810 QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869
Query: 337 RTEKVLQVY-NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
+ L +Y + M TY LID K G+L +A ++ M+ GC PN + +
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 929
Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
N++ K G+ + A ++ +M P+ TY++L+ D L KE++E
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
+ + P+V Y ++I A EM + + P Y ++ L AG ++
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 516 KHEELVEKMVDRGF 529
+ ++ ++ G
Sbjct: 1050 EAGKIYNEIQRAGL 1063
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 141/297 (47%), Gaps = 2/297 (0%)
Query: 233 RASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
+ E FD ++ + + D Y + + G + +A R+M+ G N Y+Y+
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
+I L + T A +V+ M+ G P+ T+++LM K + V+ + +M+ L
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
G + + T+ I + GK+ +A ++L M +GC P+ T+ ++ + ++ A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
++ KMK + +P+ VTY L+ F+ ++ D V + EME++ P+V T+ IL+
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
C G++ A+ + M ++ L P Y ++ L R +L EL M G
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGIL-PNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 2/181 (1%)
Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
+Y+ +IN GK + D A M V + T+S+LV G E +H F +
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGN 267
+E G PD + ++++I+ L + R EA F+ +K PD+ Y +L+ AG
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
+ EA +++ E++ AG++PNV+T++ +I G+ A+ V+ M+ G PN+ T+
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 328 L 328
L
Sbjct: 1108 L 1108
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 1/263 (0%)
Query: 266 GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITF 325
G + E VF M+ I+ + TY + +L G + +A +M E G N+ ++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
N L+ + +K+ + ++VY +M G TY+ L+ K ++ + +L M
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
G PN TF + R + + G +N A+ + +M D C P+ VTY +L+ T++ D
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
++ ++M+ +P+ TY L+ + ++ ++ EM E+ P + +++
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM-EKDGHVPDVVTFTILV 370
Query: 506 QQLRRAGQLQKHEELVEKMVDRG 528
L +AG + + ++ M D+G
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQG 393
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
T N ++ + E++ V++ M++ + DT TY + G L+ A L M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
G NA ++N + + K A +Y +M P+ TY+ LM +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
D V+ L KEME ++PNV T+ I I + G N AY+ ++ M +E C P Y +
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC-GPDVVTYTV 298
Query: 504 VLQQLRRAGQLQKHEELVEKM 524
++ L A +L +E+ EKM
Sbjct: 299 LIDALCTARKLDCAKEVFEKM 319
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 242/515 (46%), Gaps = 51/515 (9%)
Query: 40 VTNPNSSPDTPFLSPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPSL----- 94
VTN N++ ++P ++ E S + S IKD P+ SS+S + DF IPSL
Sbjct: 26 VTN-NTAEESPIVAAE----SPELPSWIKDFLSNKPSSSSSSVSKDDEDFVIPSLANWVE 80
Query: 95 SLGFS--QISTAHSI-------------------SPSTVRHVIEKSCGVRHGIPLLQVL- 132
S FS Q+S + + S V + K V +LQVL
Sbjct: 81 SQKFSRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLR 140
Query: 133 ----------SFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-- 180
FF W ++ +VHS Y+ M+++ GK R FDL W ++ M ++N E
Sbjct: 141 RFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-NKNEESK 199
Query: 181 -ITVDTFSILVRRYVRAGLAAEAVHAFNRMEE-YGCAPDKIAFSIVISILCRKRRASEAQ 238
+T+DT S ++RR ++G +AV AF ME+ YG D IA + ++ L ++ A
Sbjct: 200 LVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAH 259
Query: 239 SFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC 298
F L D +PD + L+ G+C+A +A + MK+ P+V TY+ ++A C
Sbjct: 260 EVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 299 RCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTI 358
+ G R +++ EM E GC PN +T+ +M K+ + + L VY +MK GC D
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 359 TYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM 418
Y+ LI K G+ +DA ++ M +G + +N + A R+ +M
Sbjct: 380 FYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Query: 419 KDLK---CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
+D + C PN TY L++M K ++ L M +N+V +V+TY +LI C
Sbjct: 440 EDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMS 499
Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 510
G A + E + K + P S +M++ +L +
Sbjct: 500 GKVEEACLFFEEAV-RKGMVPRDSTCKMLVDELEK 533
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 213/432 (49%), Gaps = 37/432 (8%)
Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
+S+FN + FV + ++ ++ F+ W F + KS+ V + V +F IL++
Sbjct: 114 ISYFNEMVDNG-FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIK 171
Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS-FFDSLKDKFEP 250
AG ++ + E+G +P+ + ++ +I C+K +A+ FF+ K
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
+ YT L+ G + G + ++ +M+ G+ PN+YTY+ V++ LC+ G+ A VF
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
EM E G N +T+N L+ + + + +V +QMK G + ITYN LID C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
GKL A+ + + +G +P+ T+N++ + GD +GA +M +M++ +P+ VTY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
IL+ FA S + + ++L+ MEE + P+V+TY +LI +C G N A + + M+E
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 491 EKC----------------------------------LKPGSSVYEMVLQQLRRAGQLQK 516
+ C L P + Y +++ L + + ++
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 517 HEELVEKMVDRG 528
E LVEKM+D G
Sbjct: 532 AERLVEKMIDSG 543
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 188/373 (50%), Gaps = 4/373 (1%)
Query: 135 FNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
F+ + EF SP+ +Y +I+ K + + A M + T+++L+
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
+ G+ + + +M+E G P+ ++ V++ LC+ R +A FD ++++ +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
++ Y L+ G CR ++EA +V +MK GI PN+ TY+ +ID C G++ +A +
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
++ G P+ +T+N L+ + T ++ +M+ G + +TY LID +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
+E AI++ SM G P+ T++++ G +N A R++ M + CEPN V YN
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 432 ILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEE 491
++ + S+ LKL KEMEE E+ PNV +YR +I + C A + + +MI+
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Query: 492 KCLKPGSSVYEMV 504
+ P +S+ ++
Sbjct: 543 G-IDPSTSILSLI 554
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 197/388 (50%), Gaps = 5/388 (1%)
Query: 144 FVHSPDLYHEMINLAGKVR-QFDLAWHFID-LMKSRNVEITVDTFSILVRRYVRAGLAAE 201
F H+ L ++I +GK+ QF + + L +S + + +++ YV++
Sbjct: 55 FSHAQSLLLQVI--SGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNL 112
Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRG 261
++ FN M + G P F+ +++ + ++ SFF+ K K DV + L++G
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
C AG I ++ + E+ G PNV Y+ +ID C+ G+I +A D+F EM ++G N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
T+ L+ K ++ ++Y +M+ G + TYN +++ CKDG+ +DA +V +
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 382 SMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
M +G + N T+N + + + +N A+++ +MK PN +TYN L+ F
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 442 STDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVY 501
L L ++++ + P++ TY IL++ +C G + A K ++EM EE+ +KP Y
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EERGIKPSKVTY 411
Query: 502 EMVLQQLRRAGQLQKHEELVEKMVDRGF 529
+++ R+ ++K +L M + G
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGL 439
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 131/247 (53%), Gaps = 3/247 (1%)
Query: 157 LAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
+ G R+ L A +D MKS + + T++ L+ + G +A+ ++ G
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 215 APDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAER 273
+P + ++I++S CRK S A ++++ +P + YT L+ + R+ N+ +A +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 274 VFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHV 333
+ M+ G+ P+V+TYS++I C GQ+ A +F M+E CEPN + +N ++ +
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 334 KASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAS 393
K + + L++ +M+ + +Y ++I+ CK+ K ++A +++ M+ G +P+ S
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Query: 394 TFNMIFR 400
++I R
Sbjct: 550 ILSLISR 556
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 200/390 (51%), Gaps = 2/390 (0%)
Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
FF W R F H Y+ M+++ K RQF+ ++ M ++ + +T++TF+I ++ +
Sbjct: 181 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 239
Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
A +AV F M++Y + ++ L R + EAQ FD LK++F P+++
Sbjct: 240 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 299
Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
YT L+ GWCR N+ EA R++ +M G++P++ ++++++ L R + + A +F M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
G PN ++ ++R K S E ++ ++ M G + D Y LI KL
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
+ ++L M KG P+ T+N + + ++ A R+Y KM + EP+ T+N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
M+ + +++ +M + +EM + + P+ N+Y +LI G G A +Y+ EM+ +K
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML-DKG 538
Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
+K Y R GQ + EEL ++
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 2/368 (0%)
Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
Q LA + M E T LV + R ++AV ++M E G PD +A++
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
+I LC+ +R ++A FF ++ K P+V+ YT LV G C + S+A R+ +M
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
I PNV TYS ++DA + G++ A ++F EM+ + +P+ +T+++L+ R ++
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
Q+++ M GC AD ++YN LI+ CK ++ED +K+ M ++G N T+N + +
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
+ GDV+ A + +M P+ TYNIL+ + + L + ++M++ E++ +
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 462 VNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELV 521
+ TY +I C G A+ + K LKP Y ++ L G L + E L
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 522 EKMVDRGF 529
KM G
Sbjct: 494 TKMKQEGL 501
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 7/281 (2%)
Query: 141 RPEFVHSPDLYHEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
RP V Y ++N L R D A D++K + + V T+S L+ +V+ G
Sbjct: 222 RPNVVT----YTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGKV 276
Query: 200 AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNL 258
EA F M PD + +S +I+ LC R EA FD + K DV+ Y L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
+ G+C+A + + ++FREM G+ N TY+ +I + G + +A + F++M G
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIK 378
P+ T+N L+ EK L ++ M++ + D +TY +I CK GK+E+A
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 379 VLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
+ S+ KG P+ T+ + + G ++ +Y KMK
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 141/292 (48%), Gaps = 1/292 (0%)
Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
F D +K + P ++ + L+ + + ++M++ GI+ ++YT++IVI+ C
Sbjct: 73 FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132
Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
C Q++ A + +ML++G EP+ +T +L+ + +R + + ++M +G + D +
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192
Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
YN +ID CK ++ DA + RKG PN T+ + + + A R+ M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
K PN +TY+ L+ F + +L +EM ++P++ TY LI C +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
A + M+ + CL S Y ++ +A +++ +L +M RG +
Sbjct: 313 EANQMFDLMVSKGCLADVVS-YNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
++ A D+F++M++ P+ + FN L+ VK + + V+ + +M+ LG D T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
+I+C C ++ A+ +L M++ G P+ T + + V+ A + KM ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
+P+ V YN ++ +K + KE+E + PNV TY L+ C W++A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
+ + +MI++K + P Y +L + G++ + +EL E+MV
Sbjct: 245 ARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 202/412 (49%), Gaps = 8/412 (1%)
Query: 122 VRHGIPLLQVLS----FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSR 177
+R+GI ++V F + + +RP + +P ++ + + + +Q+DL F M+
Sbjct: 42 LRNGIVDIKVNDAIDLFESMIQSRP--LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 178 NVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEA 237
+E + T +I++ Y R A R + G PD I FS +++ C + R SEA
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 238 QSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDA 296
+ D + + K PD++ + L+ G C G +SEA + M G QP+ TY V++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 297 LCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEAD 356
LC+ G A D+F +M E + + + ++ ++ K + L ++N+M+ G +AD
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYG 416
+TY+ LI C DGK +D K+L M+ + P+ TF+ + K G + A +Y
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 417 KMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
+M P+T+TYN L+ F ++ M EP++ TY ILI YC
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
++ + RE I K L P + Y ++ ++G+L +EL ++MV RG
Sbjct: 400 RVDDGMRLFRE-ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 215/441 (48%), Gaps = 14/441 (3%)
Query: 94 LSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL--Y 151
L LGF + + I I +C R ++L F+ + + + PD +
Sbjct: 88 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKK----KLLFAFSVLGRAWKLGYEPDTITF 143
Query: 152 HEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
++N L G+V + A +D M + T S L+ G +EA+ +R
Sbjct: 144 STLVNGFCLEGRVSE---AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 267
M EYG PD++ + V++ LC+ ++ A F ++++ + V+ Y+ ++ C+ G+
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
+A +F EM+M GI+ +V TYS +I LC G+ + EM+ P+ +TF+
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
L+ V VK + + ++YN+M G DTITYN LID CK+ L +A ++ + MV KG
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
C P+ T++++ K V+ R++ ++ PNT+TYN L+ F S +
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 448 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
+L +EM V P+V TY IL+ C G N A + +M + + + G +Y +++
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR-MTLGIGIYNIIIHG 499
Query: 508 LRRAGQLQKHEELVEKMVDRG 528
+ A ++ L + D+G
Sbjct: 500 MCNASKVDDAWSLFCSLSDKG 520
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 4/392 (1%)
Query: 143 EFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
E+ PD Y ++N K LA M+ RN++ +V +SI++ + G
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 201 EAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASE-AQSFFDSLKDKFEPDVIVYTNLV 259
+A+ FN ME G D + +S +I LC + + A+ + + PDV+ ++ L+
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
+ + G + EA+ ++ EM GI P+ TY+ +ID C+ + A+ +F M+ GCE
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
P+ +T++ L+ + KA R + ++++ ++ G +TITYN L+ C+ GKL A ++
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
MV +G P+ T+ ++ + G++N A ++ KM+ + YNI++
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
+ D L + + V+P+V TY ++I C G + A R+M E+ C P
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC-TPDDF 561
Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
Y ++++ L EL+E+M GF+A
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 1/299 (0%)
Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
M RN+ V TFS L+ +V+ G EA +N M G APD I ++ +I C++
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 234 ASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
EA FD + K EPD++ Y+ L+ +C+A + + R+FRE+ G+ PN TY+
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
++ C+ G++ A ++F EM+ G P+ +T+ L+ K L+++ +M++
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
YN +I C K++DA + S+ KG P+ T+N++ + K G ++ A
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
++ KMK+ C P+ TYNIL++ ++L +EM+ + +T +++I M
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 38/294 (12%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PD+ + +I++ K + A + M +R + T++ L+ + + EA
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
F+ M GC PD + +SI+I+ C+ +R + F + K P+ I Y LV G+C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML---------- 314
+G ++ A+ +F+EM G+ P+V TY I++D LC G++ +A ++F +M
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 315 -------------------------EVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
+ G +P+ +T+N ++ K + ++ +MK
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
GC D TYN LI H L +++++ M G + ++ST M+ +S
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 1/230 (0%)
Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
++ A D+F M++ P I FN L + + + VL M+ G E D T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
+I+C+C+ KL A VL + G P+ TF+ + G V+ A + +M ++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
K P+ VT + L+ L L M E +P+ TY ++ C G+ A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
R+M EE+ +K Y +V+ L + G L +M +G A
Sbjct: 230 LDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 36/197 (18%)
Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK-------LG-----DVNG-AHRMY- 415
D K+ DAI + SM++ P FN + +++ LG ++NG H MY
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 416 ---------------------GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
G+ L EP+T+T++ L+ F + L M
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQL 514
E + P++ T LI C G + A I M+E +P Y VL +L ++G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRLCKSGNS 226
Query: 515 QKHEELVEKMVDRGFTA 531
+L KM +R A
Sbjct: 227 ALALDLFRKMEERNIKA 243
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 191/380 (50%), Gaps = 3/380 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y++M+N K+ + A ++ + ++ T++ L+ Y + A FN M
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
GC +++A++ +I LC RR EA F +K D+ P V YT L++ C + S
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
EA + +EM+ GI+PN++TY+++ID+LC + +A ++ +MLE G PN IT+N L+
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
+ K E + V M+ +T TYN LI +CK + A+ VLN M+ +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
P+ T+N + + G+ + A+R+ M D P+ TY ++ SK + L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
+E+ V PNV Y LI YC G + A+ + +M+ + CL P S + ++ L
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLC 578
Query: 510 RAGQLQKHEELVEKMVDRGF 529
G+L++ L EKMV G
Sbjct: 579 ADGKLKEATLLEEKMVKIGL 598
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 199/434 (45%), Gaps = 23/434 (5%)
Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
+I+ CG L ++ +P +H+ Y +I+ +F+ A + M
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPN-IHT---YTVLIDSLCSQCKFEKARELLGQM 384
Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
+ + V T++ L+ Y + G+ +AV ME +P+ ++ +I C+
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444
Query: 235 SEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
L+ K PDV+ Y +L+ G CR+GN A R+ M G+ P+ +TY+ +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
D+LC+ ++ A D+F + + G PN + + L+ + KA + ++ + +M C
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
+++T+N LI C DGKL++A + MV+ G P ST ++ + K GD + A+
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
+ +M +P+ TY +Q + + +M EN V P++ TY LI Y
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL--RRAGQLQKHE-------------- 518
+G N A+ ++ M + C +P + +++ L + G+ + E
Sbjct: 685 LGQTNFAFDVLKRMRDTGC-EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 519 --ELVEKMVDRGFT 530
EL+EKMV+ T
Sbjct: 744 VVELLEKMVEHSVT 757
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 186/432 (43%), Gaps = 23/432 (5%)
Query: 102 STAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKV 161
S +ISPS V + + L+F +W++ P + HS Y ++ L
Sbjct: 83 SMVSAISPSHVSSLFSLDLDPK------TALNFSHWISQNPRYKHSVYSYASLLTLLINN 136
Query: 162 RQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKI-- 219
+ + I L+ ++ + D +L + N+ E + I
Sbjct: 137 GYVGVVFK-IRLLMIKSCDSVGDALYVL-----------DLCRKMNKDERFELKYKLIIG 184
Query: 220 AFSIVISILCRKRRASE-AQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
++ +++ L R E Q + + L+DK P++ Y +V G+C+ GN+ EA + ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
AG+ P+ +TY+ +I C+ + A VF EM GC N + + +L+ A R
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
++ + ++ +MK C TY LI C + +A+ ++ M G PN T+ ++
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
+ A + G+M + PN +TYN L+ + + + + + ME ++
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
PN TY LI YC + + A + +M+E K L P Y ++ R+G
Sbjct: 425 SPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDSAY 482
Query: 519 ELVEKMVDRGFT 530
L+ M DRG
Sbjct: 483 RLLSLMNDRGLV 494
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 155/409 (37%), Gaps = 90/409 (22%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y MI+ K ++ + A D ++ + V V ++ L+ Y +AG EA +M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSF----------------------------FD 242
C P+ + F+ +I LC + EA FD
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 243 SLKDKFE--------PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
+F+ PD YT ++ +CR G + +AE + +M+ G+ P+++TYS +I
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR------------------------ 330
GQ A DV M + GCEP+ TF +L++
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 331 ----------------VHVKASRTEKVL-------------QVYNQMKR-LGCEADTITY 360
V A EK++ +V++ M+R G + +
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
N L+ C CK K +A KV++ M+ G P + ++ + K G+ ++ +
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
+ + + I++ + +L ME+N + + TY +LI
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 22/241 (9%)
Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE--- 201
SPDL Y +I G + Q + A+ + M+ E + TF L++ + +
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 202 ---------------AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK- 245
V +M E+ P+ ++ +I +C A+ FD ++
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 246 -DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
+ P +V+ L+ C+ +EA +V +M G P + + ++I L + G+
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848
Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
R VF +L+ G + + + ++ K E +++N M++ GC+ + TY+ LI
Sbjct: 849 RGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Query: 365 D 365
+
Sbjct: 909 E 909
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 198/390 (50%), Gaps = 2/390 (0%)
Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
FF W R F H+ Y+ M+++ K RQF+ ++ M ++ + +T++TF+I ++ +
Sbjct: 181 FFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 239
Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
A +AV F M++Y + ++ L R + EAQ FD LK++F P+++
Sbjct: 240 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 299
Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
YT L+ GWCR N+ EA R++ +M G++P++ ++++++ L R + + A +F M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
G PN ++ ++R K S E ++ ++ M G + D Y LI KL
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
+ ++L M KG P+ T+N + + ++ R+Y KM + EP+ T+N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
M+ + +++ +M + EM + + P+ N+Y +LI G A +Y+ EM+ +K
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML-DKG 538
Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
+K Y R GQ + EEL ++
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 197/390 (50%), Gaps = 2/390 (0%)
Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
FF W R F H Y+ M+++ K RQF+ ++ M ++ + +T++TF+I ++ +
Sbjct: 180 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 238
Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVI 253
A +AV F M++Y + ++ L R + EAQ FD LK++F P+++
Sbjct: 239 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 298
Query: 254 VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
YT L+ GWCR N+ EA R++ +M G++P++ ++++++ L R + + A +F M
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 314 LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 373
G PN ++ ++R K S E ++ ++ M G + D Y LI KL
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 374 EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 433
+ ++L M KG P+ T+N + + ++ R+Y KM + EP+ T+N++
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 434 MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 493
M+ + +++ +M + EM + + P+ N+Y +LI G A +Y+ EM+ +K
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML-DKG 537
Query: 494 LKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
+K Y R GQ + EEL ++
Sbjct: 538 MKTPLIDYNKFAADFHRGGQPEIFEELAQR 567
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 202/392 (51%), Gaps = 10/392 (2%)
Query: 143 EFVHSPDL--YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
E H P L + ++N L GKV A ID M + T+ ++ ++G
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSD---AVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYT 256
A A+ +MEE D + +SI+I LC+ A + F+ ++ K F+ D+I Y
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
L+ G+C AG + ++ R+M I PNV T+S++ID+ + G++ A + EM++
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
G PN+IT+N+L+ K +R E+ +Q+ + M GC+ D +T+N LI+ +CK +++D
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
+++ M +G N T+N + + + G + A +++ +M + P+ V+Y IL+
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
+ + L++ ++E++++E ++ Y I+I C ++A+ + K +K
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL-PLKGVKL 541
Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
+ Y +++ +L R L K + L KM + G
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 198/395 (50%), Gaps = 4/395 (1%)
Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
F + + +RP + + ++ + + K +Q++L M+S+ + ++ T SI++ +
Sbjct: 76 FRDMIQSRP--LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
R + A ++ + G PD + F+ +++ LC + R SEA D + + +P +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
I LV G C G +S+A + M G QPN TY V++ +C+ GQ A ++ +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
M E + +++ ++ ++ K + ++N+M+ G +AD ITYN LI C G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
+D K+L M+++ +PN TF+++ K G + A ++ +M PNT+TYN
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
L+ F + +++ M +P++ T+ ILI YC ++ + REM +
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLR 432
Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
+ + Y ++Q ++G+L+ ++L ++MV R
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 186/355 (52%), Gaps = 2/355 (0%)
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
A +D M + T+ T + LV G ++AV +RM E G P+++ + V++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
++C+ + + A ++++ + D + Y+ ++ G C+ G++ A +F EM++ G +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
++ TY+ +I C G+ + +M++ PN +TF+ L+ VK + + Q+
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
+M + G +TITYN LID CK+ +LE+AI++++ M+ KGC+P+ TFN++ K
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
++ ++ +M NTVTYN L+Q F S ++ KL +EM V P++ +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
+IL+ C G A + + IE+ ++ +Y +++ + A ++ +L
Sbjct: 477 KILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 174/372 (46%), Gaps = 3/372 (0%)
Query: 161 VRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIA 220
++ D F D+++SR + +D F+ L + + +ME G A
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVID-FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125
Query: 221 FSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMK 279
SI+I+ CR R+ S A S +K +EPD +++ L+ G C +SEA + M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 280 MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
G +P + T + +++ LC G+++ A + M+E G +PN +T+ ++ V K+ +T
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIF 399
+++ +M+ + D + Y+ +ID CKDG L++A + N M KG + T+N +
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
G + ++ M K PN VT+++L+ F +L KEM + +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
PN TY LI +C A + + MI + C P + +++ +A ++ E
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC-DPDIMTFNILINGYCKANRIDDGLE 424
Query: 520 LVEKMVDRGFTA 531
L +M RG A
Sbjct: 425 LFREMSLRGVIA 436
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 159/322 (49%), Gaps = 1/322 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ +I ++D + M R + V TFS+L+ +V+ G EA M
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
+ G AP+ I ++ +I C++ R EA D + K +PD++ + L+ G+C+A I
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
+ +FREM + G+ N TY+ ++ C+ G++ A +F EM+ P+ +++ L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
EK L+++ ++++ E D Y +I C K++DA + S+ KG
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
+A +N++ + + ++ A ++ KM + P+ +TYNIL++ +L
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 450 KKEMEENEVEPNVNTYRILITM 471
+EM+ + +V+T +++I M
Sbjct: 601 IEEMKSSGFPADVSTVKMVINM 622
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 38/402 (9%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y ++N+ K Q LA + M+ RN+++ +SI++ + G A + FN ME
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 211 EYGCAPDKIAFSIVISILCR---------------KRRASEAQSFFDSLKDKF------- 248
G D I ++ +I C KR+ S F L D F
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 249 --------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
P+ I Y +L+ G+C+ + EA ++ M G P++ T++I+I
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
+ C+ +I ++F EM G N++T+N L++ ++ + E +++ +M
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
D ++Y L+D C +G+LE A+++ + + + + +I + V+ A +
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
+ + + + YNI++ S L ++M E P+ TY ILI + G
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQK 516
A + I EM + S +MV+ L +G+L K
Sbjct: 591 DDDATTAAELIEEM-KSSGFPADVSTVKMVINML-SSGELDK 630
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 190/365 (52%), Gaps = 5/365 (1%)
Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
L G+V + A +D M + + T + LV +G AEA+ ++M EYGC P
Sbjct: 170 LEGRVSE---ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226
Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
+ + + V++++C+ + + A ++++ + D + Y+ ++ G C+ G++ A +F
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
EM+M GI N+ TY+I+I C G+ + +M++ PN +TF+ L+ VK
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 346
Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
+ + +++ +M G DTITY LID CK+ L+ A ++++ MV KGC+PN TF
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
N++ K ++ ++ KM +TVTYN L+Q F ++ +L +EM
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
+V PN+ TY+IL+ C G A + I E IE+ ++ +Y +++ + A ++
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALE-IFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 516 KHEEL 520
+L
Sbjct: 526 DAWDL 530
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 188/382 (49%), Gaps = 2/382 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y ++N+ K Q LA + M+ RN+++ +SI++ + G A + FN ME
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
G + I ++I+I C R + D +K K P+V+ ++ L+ + + G +
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
EAE + +EM GI P+ TY+ +ID C+ + +A+ + M+ GC+PN TFN L+
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
+ KA+R + L+++ +M G ADT+TYN LI C+ GKL A ++ MV +
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
PN T+ ++ + G+ A ++ K++ K E + YNI++ + D L
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
+ V+P V TY I+I C G + A R+M EE P Y ++++
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM-EEDGHAPDGWTYNILIRAHL 589
Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
G K +L+E++ GF+
Sbjct: 590 GDGDATKSVKLIEELKRCGFSV 611
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 187/391 (47%), Gaps = 7/391 (1%)
Query: 143 EFVHSPDL-----YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG 197
+ +HS L + + + K +Q+DL M+ + + + T SI++ + R
Sbjct: 78 DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 137
Query: 198 LAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYT 256
A A ++ + G P+ I FS +I+ LC + R SEA D + + +PD+I
Sbjct: 138 KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN 197
Query: 257 NLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
LV G C +G +EA + +M G QPN TY V++ +C+ GQ A ++ +M E
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
+ +++ ++ ++ K + ++N+M+ G + ITYN LI C G+ +D
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQM 436
K+L M+++ NPN TF+++ K G + A ++ +M P+T+TY L+
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 437 FATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKP 496
F D ++ M +PN+ T+ ILI YC ++ + R+M + +
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVA 436
Query: 497 GSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
+ Y ++Q G+L +EL ++MV R
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 157/299 (52%), Gaps = 2/299 (0%)
Query: 233 RASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYS 291
+A +A F D + + P VI ++ L + + ++M++ GI N+YT S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 292 IVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 351
I+I+ CRC ++ A +++++G EPN+ITF+ L+ R + L++ ++M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 352 GCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGA 411
G + D IT N L++ C GK +A+ +++ MV GC PNA T+ + + K G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
+ KM++ + + V Y+I++ S D L EME + N+ TY ILI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
+C G W++ K +R+MI+ K + P + +++ + G+L++ EEL ++M+ RG
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 3/363 (0%)
Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
F D++ SR + +D FS L + + +ME G A + SI+I+ C
Sbjct: 76 FRDMIHSRPLPTVID-FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
R R+ A S + K +EP+ I ++ L+ G C G +SEA + M G +P++
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
T + +++ LC G+ A + +M+E GC+PN++T+ ++ V K+ +T +++ +M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
+ + D + Y+ +ID CK G L++A + N M KG N T+N++ G
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
+ ++ M K PN VT+++L+ F +L KEM + P+ TY L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
I +C H + A + + M+ + C P + +++ +A ++ EL KM RG
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGC-DPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 529 FTA 531
A
Sbjct: 434 VVA 436
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 158/322 (49%), Gaps = 1/322 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ +I ++D + M R + V TFS+L+ +V+ G EA M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 269
G APD I ++ +I C++ +A D + K +P++ + L+ G+C+A I
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
+ +FR+M + G+ + TY+ +I C G++ A ++F EM+ PN +T+ L+
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
+EK L+++ ++++ E D YN +I C K++DA + S+ KG
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
P T+N++ + K G ++ A ++ KM++ P+ TYNIL++ +KL
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 450 KKEMEENEVEPNVNTYRILITM 471
+E++ + +T +++I M
Sbjct: 601 IEELKRCGFSVDASTIKMVIDM 622
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%)
Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
+Y+ +I+ + D AW + + V+ V T++I++ + G +EA F +M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
EE G APD ++I+I A+++ + LK
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 198/390 (50%), Gaps = 8/390 (2%)
Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
+PDL Y +I + + DL + + + + + F+ L++ ++A+
Sbjct: 84 TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143
Query: 205 -AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK----FEPDVIVYTNLV 259
RM E GC P+ +++I++ LC + R+ EA + D PDV+ YT ++
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 260 RGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE 319
G+ + G+ +A + EM GI P+V TY+ +I ALC+ + +A +V M++ G
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263
Query: 320 PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
P+ +T+N+++ + + + ++ + +M+ G E D +TY+ L+D CK+G+ +A K+
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
+SM ++G P +T+ + + + G + H + M P+ ++IL+ +A
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383
Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
D + + +M + + PN TY +I + C G +A Y +MI+E L PG+
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG-LSPGNI 442
Query: 500 VYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
VY ++ L + ++ EEL+ +M+DRG
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 4/384 (1%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PD+ Y+ +I K + D A ++ M V T++ ++ Y +G EA+
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCR 264
+M G PD + +S+++ LC+ R EA+ FDS+ K +P++ Y L++G+
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
G + E + M GI P+ Y +SI+I A + G++ +A VF++M + G PN++T
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
+ ++ + K+ R E + + QM G I YN LI C K E A +++ M+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
+G N FN I K G V + +++ M + +PN +TYN L+ + + D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
+KL M ++PN TY LI YC + +A +EM E + P Y ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM-ESSGVSPDIITYNII 587
Query: 505 LQQLRRAGQLQKHEELVEKMVDRG 528
LQ L + + +EL ++ + G
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESG 611
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 178/358 (49%), Gaps = 8/358 (2%)
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
A D M R ++ + T+ L++ Y G E + M G PD FSI+I
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
++ + +A F ++ + P+ + Y ++ C++G + +A F +M G+ P
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
Y+ +I LC C + RA ++ EML+ G N+I FN+++ H K R + +++
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
M R+G + + ITYN LI+ +C GK+++A+K+L+ MV G PN T++ + K+
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
+ A ++ +M+ P+ +TYNI++Q ++ T +L + E+ + ++TY
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKC---LKPGSSVYEMVLQQLRRAGQLQKHEEL 520
I++ C ++A +M + C LK + + +++ L + G+ + ++L
Sbjct: 620 NIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 206/480 (42%), Gaps = 49/480 (10%)
Query: 92 PSLSLGFSQISTAHSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTAR---PEFVHSP 148
P ++GF + + + P V + + ++G ++ F+ +T R PE
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG-RCMEARKIFDSMTKRGLKPEITTYG 340
Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
L V L +DLM + FSIL+ Y + G +A+ F++
Sbjct: 341 TLLQGYATKGALVEMHGL----LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396
Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRG------ 261
M + G P+ + + VI ILC+ R +A +F+ + D+ P IVY +L+ G
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 262 W-----------------------------CRAGNISEAERVFREMKMAGIQPNVYTYSI 292
W C+ G + E+E++F M G++PNV TY+
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
+I+ C G++ A + + M+ VG +PN++T++ L+ + K SR E L ++ +M+ G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
D ITYN ++ + + A ++ + G ST+N+I + K + A
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 413 RMYGK--MKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
+M+ + DLK E T+NI++ D L N + PN TYR++
Sbjct: 637 QMFQNLCLMDLKLEAR--TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
G G + M + C S + ++++L + G++ + + + ++ F+
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGC-TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 753
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 12/303 (3%)
Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA-----GIQPNVYTY 290
+A+ FD L + I N R S A V R +MA + P++ TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLN--RALADVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 291 SIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ-VYNQMK 349
I+I CR G++ +++ G ++I F L++ RT + V +M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK---GCNPNASTFNMIFRCISKLG 406
LGC + +YN L+ C + + ++A+++L+ M G P+ ++ + K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYR 466
D + A+ Y +M D P+ VTYN ++ +++ D +++ M +N V P+ TY
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 467 ILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
++ YC G A ++++M + ++P Y +++ L + G+ + ++ + M
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 527 RGF 529
RG
Sbjct: 330 RGL 332
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 151 YHEMIN---LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFN 207
Y+ +IN LAGK+ D A + M S ++ T+S L+ Y + +A+ F
Sbjct: 514 YNTLINGYCLAGKM---DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 208 RMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAG 266
ME G +PD I ++I++ L + RR + A+ + + + + ++ Y ++ G C+
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630
Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
+A ++F+ + + ++ T++I+IDAL + G+ A D+F G PN T+
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690
Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
+ + E++ Q++ M+ GC D+ NF++ + G++ A L+ + K
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
Query: 387 GCNPNASTFNMIFRCIS 403
+ AST ++ +S
Sbjct: 751 HFSLEASTASLFIDLLS 767
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 193/390 (49%), Gaps = 8/390 (2%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PD+ Y+ +IN K+ + D A +D M+S++ T++I++ G A+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
N++ C P I ++I+I + EA D + + +PD+ Y ++RG C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
G + A + R +++ G +P+V +Y+I++ AL G+ + +M C+PN +T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
++ L+ + + E+ + + MK G D +Y+ LI C++G+L+ AI+ L +M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
GC P+ +N + + K G + A ++GK+ ++ C PN+ +YN + +S
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC-LKPGSSVYEM 503
L + EM N ++P+ TY +I+ C G + A++ + +M C P Y +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYNI 513
Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
VL +A +++ ++E MV G RP
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNG--CRP 541
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 4/382 (1%)
Query: 147 SPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
SPD Y+ MI + DLA ++ + S N + TV T++IL+ + G EA+
Sbjct: 190 SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
+ M G PD ++ +I +C++ A +L+ K EPDVI Y L+R
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
G E E++ +M PNV TYSI+I LCR G+I A ++ M E G P++
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
+++ L+ + R + ++ M GC D + YN ++ CK+GK + A+++ +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
GC+PN+S++N +F + GD A M +M +P+ +TYN ++
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
D +L +M E P+V TY I++ +C +A + M+ C +P + Y +
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC-RPNETTYTV 548
Query: 504 VLQQLRRAGQLQKHEELVEKMV 525
+++ + AG + EL +V
Sbjct: 549 LIEGIGFAGYRAEAMELANDLV 570
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 168/340 (49%), Gaps = 1/340 (0%)
Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
+ R R+G E++H M G PD I + +I R +A + L+
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
+PDV Y L+ G+C+ I +A RV M+ P+ TY+I+I +LC G++ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 368
V ++L C+P IT+ L+ + ++ L++ ++M G + D TYN +I C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
K+G ++ A +++ ++ KGC P+ ++N++ R + G ++ KM KC+PN V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
TY+IL+ + + L K M+E + P+ +Y LI +C G + A +++ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 489 IEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
I + CL P Y VL L + G+ + E+ K+ + G
Sbjct: 395 ISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
GK+ + A + + LMK + + ++ L+ + R G A+ M GC PD
Sbjct: 347 GKIEE---AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
+ ++ V++ LC+ +A +A F L + P+ Y + +G+ A + E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
M GI P+ TY+ +I LCR G + A ++ +M P+ +T+N ++ KA R
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
E + V M GC + TY LI+ G +A+++ N +VR
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 7/246 (2%)
Query: 109 PSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ--FDL 166
P+ V + I + R G ++ N + E +PD Y +A R+ D+
Sbjct: 331 PNVVTYSILITTLCRDG----KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
A F++ M S + ++ ++ + G A +A+ F ++ E GC+P+ +++ + S
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 227 ILCRKRRASEA-QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
L A + + + +PD I Y +++ CR G + EA + +M+ P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
+V TY+IV+ C+ +I A +V M+ GC PN T+ L+ A + +++
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566
Query: 346 NQMKRL 351
N + R+
Sbjct: 567 NDLVRI 572
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 209/414 (50%), Gaps = 19/414 (4%)
Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRN---VEITVDTFSI 188
L FF+WV+ + F H + M+ G+ R ++A +F+ ++ R+ V++ F+
Sbjct: 85 LRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNS 143
Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
L+R Y AGL E+V F M++ G +P + F+ ++SIL ++ R A FD ++ +
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 249 --EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
PD + L+ G+C+ + EA R+F++M++ P+V TY+ +ID LCR G++ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 307 HDVFAEMLEVGCE--PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
H+V + ML+ + PN +++ L+R + ++ + V++ M G + + +TYN LI
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 365 DCHCKDGKLEDAIKVL--NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
+ + ++ +L + P+A TFN++ + G ++ A +++ +M ++K
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV-------EPNVNTYRILITMYCGM 475
P++ +Y++L++ D L E+ E EV +P Y + C
Sbjct: 384 LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN 443
Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
G A K R++++ P S Y+ ++ R G+ + EL+ M+ R F
Sbjct: 444 GKTKQAEKVFRQLMKRGVQDPPS--YKTLITGHCREGKFKPAYELLVLMLRREF 495
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 158/341 (46%), Gaps = 16/341 (4%)
Query: 158 AGKVRQFDLAWHFID--LMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
AGKV+ +A + + L K+ +V V +++ LVR Y EAV F+ M G
Sbjct: 257 AGKVK---IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKF---EPDVIVYTNLVRGWCRAGNISEAE 272
P+ + ++ +I L R E + D F PD + L++ C AG++ A
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLE----VG---CEPNSITF 325
+VF+EM + P+ +YS++I LC + RA +F E+ E +G C+P + +
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 326 NNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
N + +T++ +V+ Q+ + G + D +Y LI HC++GK + A ++L M+R
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLR 492
Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
+ P+ T+ ++ + K+G+ AH +M P T++ ++ A K +
Sbjct: 493 REFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANE 552
Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
L M E + N++ ++ + A+ +R
Sbjct: 553 SFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR 593
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 4/209 (1%)
Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
V P Y +I + +F A+ + LM R ++T+ +L+ ++ G A A
Sbjct: 461 VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520
Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD-SLKDKFEPDVIVYTNLVRGWC 263
RM P F V++ L +++ A+E+ L+ + ++ + T +VR
Sbjct: 521 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLF 580
Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
+ ++ E+ F +++ + ++ LC ++ AH + LE +
Sbjct: 581 SS---AQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDID 637
Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
T N ++ K R + +YN++ LG
Sbjct: 638 TCNTVIEGLCKHKRHSEAFSLYNELVELG 666
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 189/376 (50%), Gaps = 7/376 (1%)
Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVE-ITVDTFSILV 190
+FF W + +V S YH MI++ GK+R+FD AW ID M+ + + T I++
Sbjct: 145 FTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMI 204
Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
R+Y +A++ F+ + + F ++S LCR + S+A KDK+
Sbjct: 205 RKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF 264
Query: 251 DVIVYTNLVRGWCRA-GNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
D + ++ GWC G+ EAERV+ EM G++ +V +YS +I + G + + +
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR-LGCEADTITYNFLIDCHC 368
F M + EP+ +N ++ KAS + + M+ G E + +TYN LI C
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
K K E+A +V + M+ KG P T++ R + +V + KM+ + CEP
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVE 441
Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREM 488
TY +L++ + D VL L EM+E V P++++Y ++I G AY Y +EM
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Query: 489 IEEKCLKPGSSVYEMV 504
++K ++P +V +M+
Sbjct: 502 -KDKGMRPNENVEDMI 516
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 6/257 (2%)
Query: 185 TFSILVRRYVRA-GLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
+F+I++ + G EA + M G D +++S +IS + ++ FD
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 244 LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKM-AGIQPNVYTYSIVIDALCRCG 301
+K + EPD VY +V +A +SEA + + M+ GI+PNV TY+ +I LC+
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
+ A VF EMLE G P T++ MR+ E+V ++ +M+++GCE TY
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFELLAKMRKMGCEPTVETYI 444
Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
LI C+ ++ + + + M K P+ S++ ++ + G + A+ Y +MKD
Sbjct: 445 MLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Query: 422 KCEPNTVTYNILMQMFA 438
PN +++ F+
Sbjct: 505 GMRPNENVEDMIQSWFS 521
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE-PNSITFNNLMRVHVKASR 337
K G +V Y +I L + + A + EM + NS T ++R +
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP-NASTFN 396
K + ++ KR E + L+ C+ + DA ++ K P +A +FN
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 270
Query: 397 MIFR-CISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
++ + +G A R++ +M ++ + + V+Y+ ++ ++ S + VLKL M++
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 456 NEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQ 515
+EP+ Y ++ + A ++ M EEK ++P Y +++ L +A + +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 516 KHEELVEKMVDRGF 529
+ +++ ++M+++G
Sbjct: 391 EAKQVFDEMLEKGL 404
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 194/403 (48%), Gaps = 36/403 (8%)
Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
L W + HS D Y +++ GK +++D F++ M+ + +T++T + ++
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIM 162
Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
RR+ AG EAV F+R+ E+G + + ++++ LC+++R +A+ LK P
Sbjct: 163 RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP 222
Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
+ + + GWC+A + EA +EMK G +P V +Y+ +I C+ + + +++
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
+EM G PNSIT+ +M E+ L+V +MKR GC+ D++ YN LI +
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342
Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
G+LE+A +V FR +M +L NT TY
Sbjct: 343 GRLEEAERV-------------------FRV---------------EMPELGVSINTSTY 368
Query: 431 NILMQMFATSKSTDMVLKLKKEME-ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
N ++ M+ D ++L KEME N P+V+TY+ L+ G K ++EM+
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
+ L S Y ++Q+L RA + L E+M+ + T R
Sbjct: 429 TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 201/400 (50%), Gaps = 2/400 (0%)
Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
L+F ++ + F ++ ++N K A +D+M + V T++ ++
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 192 RYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEP 250
+ G EAV ++M C+P+ + ++ +IS LC++ + EA L K P
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
DV + +L++G C N A +F EM+ G +P+ +TY+++ID+LC G++ A ++
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKD 370
+M GC + IT+N L+ KA++T + +++++M+ G +++TYN LID CK
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 371 GKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTY 430
++EDA ++++ M+ +G P+ T+N + + GD+ A + M CEP+ VTY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 431 NILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
L+ + ++ KL + ++ + + Y +I A REM+E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 491 EKCLKPGSSVYEMVLQQL-RRAGQLQKHEELVEKMVDRGF 529
+ P + Y +V + L G +++ + + +++++GF
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 191/400 (47%), Gaps = 12/400 (3%)
Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVR 191
L FN + +P F P LY E++ G+ FD ++ MKS E+ TF IL+
Sbjct: 67 LRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIE 126
Query: 192 RYVRAGLAAEAVHAFNRM-EEYGCAPDKIAFSIVISILC-----RKRRASEAQSFFDSLK 245
Y + L E + + M +E+G PD ++ ++++L + S A+ +K
Sbjct: 127 SYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK 186
Query: 246 DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
PDV + L++ CRA + A + +M G+ P+ T++ V+ G +
Sbjct: 187 ----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK-RLGCEADTITYNFLI 364
A + +M+E GC ++++ N ++ K R E L +M + G D T+N L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
+ CK G ++ AI++++ M+++G +P+ T+N + + KLG+V A + +M C
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
PNTVTYN L+ + +L + + + P+V T+ LI C + A +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
EM + C +P Y M++ L G+L + ++++M
Sbjct: 423 FEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 4/264 (1%)
Query: 269 SEAERVFR-EMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
S A R+F K P Y ++ L R G + +M CE + TF
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 328 LMRVHVKASRTEKVLQVYNQM-KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNS-MVR 385
L+ + + +++L V + M G + DT YN +++ DG +++ ++ M
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV-DGNSLKLVEISHAKMSV 182
Query: 386 KGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDM 445
G P+ STFN++ + + + + A M M P+ T+ +MQ + D
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 446 VLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVL 505
L+++++M E + + +++ +C G +A +I+EM + P + ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 506 QQLRRAGQLQKHEELVEKMVDRGF 529
L +AG ++ E+++ M+ G+
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGY 326
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 180/355 (50%), Gaps = 2/355 (0%)
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
A +D M + TF+ L+ A+EAV +RM GC PD + V++
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
LC++ A S + K K E DV++YT ++ C N+++A +F EM GI+P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
NV TY+ +I LC G+ + A + ++M+E PN +TF+ L+ VK + + ++Y
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
++M + + D TY+ LI+ C +L++A + M+ K C PN T+N + + K
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
V ++ +M NTVTYN L+Q + DM K+ K+M + V P++ TY
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
IL+ C G A + E +++ ++P Y ++++ + +AG+++ +L
Sbjct: 469 SILLDGLCKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 191/387 (49%), Gaps = 4/387 (1%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PDL Y ++N K DLA + M+ +E V ++ ++ +A++
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 277
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
F M+ G P+ + ++ +I LC R S+A D ++ K P+V+ ++ L+ + +
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
G + EAE+++ EM I P+++TYS +I+ C ++ A +F M+ C PN +T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
+N L++ KA R E+ ++++ +M + G +T+TYN LI + G + A K+ MV
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
G P+ T++++ + K G + A ++ ++ K EP+ TYNI+++ + +
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
L + V+PNV Y +I+ +C G A REM E+ L P S Y +
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTL 576
Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
++ R G EL+++M GF
Sbjct: 577 IRARLRDGDKAASAELIKEMRSCGFVG 603
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 186/396 (46%), Gaps = 4/396 (1%)
Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
F V +RP + S ++++++ K+ +FDL + M++ + + +++IL+ +
Sbjct: 68 FGEMVQSRP--LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDV 252
R A+ +M + G PD + S +++ C +R SEA + D + +++P+
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
+ + L+ G SEA + M G QP+++TY V++ LC+ G I A + +
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
M + E + + + ++ L ++ +M G + +TYN LI C C G+
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
DA ++L+ M+ + NPN TF+ + K G + A ++Y +M +P+ TY+
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
L+ F D + + M + PNV TY LI +C + REM ++
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQR 424
Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
L + Y ++Q L +AG +++ +KMV G
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 175/369 (47%), Gaps = 5/369 (1%)
Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
+Y +I+ + + A + M ++ + V T++ L+R G ++A + M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
E P+ + FS +I ++ + EA+ +D + K +PD+ Y++L+ G+C +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
EA+ +F M PNV TY+ +I C+ ++ ++F EM + G N++T+N L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
++ +A + +++ +M G D ITY+ L+D CK GKLE A+ V + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
P+ T+N++ + K G V ++ + +PN + Y ++ F +
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG-SSVYEMVLQQ 507
L +EM+E+ PN TY LI G + + I+EM C G +S MV+
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM--RSCGFVGDASTISMVINM 614
Query: 508 LRRAGQLQK 516
L G+L+K
Sbjct: 615 LHD-GRLEK 622
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 127/295 (43%), Gaps = 36/295 (12%)
Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
+ +A +F EM + P++ ++ ++ A+ + + + M + + ++N
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 387
L+ + S+ L V +M +LG E D +T + L++ +C ++ +A+ +++ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 388 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 447
PN TFN + + + A + +M C+P+ TY ++ D+ L
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 448 KLKKEMEENEVE-----------------------------------PNVNTYRILITMY 472
L K+ME+ ++E PNV TY LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
C G W++A + + +MIE K + P + ++ + G+L + E+L ++M+ R
Sbjct: 301 CNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 36/223 (16%)
Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
++ A D+F EM++ P+ + FN L+ K ++ + V+ + +M+ L D +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
LI+C C+ +L A+ VL GKM L
Sbjct: 120 ILINCFCRRSQLPLALAVL-----------------------------------GKMMKL 144
Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
EP+ VT + L+ + K + L +M E +PN T+ LI + A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
I M+ C +P Y V+ L + G + L++KM
Sbjct: 205 VALIDRMVARGC-QPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
D KL+DA+ + MV+ P+ FN + I+K+ + + +M++L+ + +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
YNIL+ F + L + +M + EP++ T L+ YC + A + +M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
+ +P + + ++ L + + L+++MV RG
Sbjct: 178 VME-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 184/355 (51%), Gaps = 2/355 (0%)
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
A +D M + TF+ L+ A+EA+ +RM GC PD + + +V++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
LC++ A + + + + K EP V++Y ++ G C+ ++ +A +F+EM+ GI+P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
NV TYS +I LC G+ + A + ++M+E P+ TF+ L+ VK + + ++Y
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
++M + + +TY+ LI+ C +L++A ++ MV K C P+ T+N + + K
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
V ++ +M NTVTYNIL+Q + DM ++ KEM + V PN+ TY
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
L+ C G A + E ++ ++P Y ++++ + +AG+++ +L
Sbjct: 470 NTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 4/387 (1%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PDL Y ++N K DLA++ ++ M+ +E V ++ ++ + +A++
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
F ME G P+ + +S +IS LC R S+A D ++ K PDV ++ L+ + +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
G + EAE+++ EM I P++ TYS +I+ C ++ A +F M+ C P+ +T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
+N L++ K R E+ ++V+ +M + G +T+TYN LI + G + A ++ MV
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
G PN T+N + + K G + A ++ ++ K EP TYNI+++ + +
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
L + V+P+V Y +I+ +C G A +EM E+ L P S Y +
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTL 577
Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
++ R G + EL+++M GF
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAG 604
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 152/288 (52%), Gaps = 1/288 (0%)
Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
F + +K + P +I ++ L+ + + +M+ GI N YTYSI+I+ CR
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128
Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
Q+ A V +M+++G EPN +T ++L+ + + R + + + +QM G + +T+T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
+N LI K +A+ +++ MV KGC P+ T+ ++ + K GD + A + KM+
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
K EP + YN ++ K D L L KEME + PNV TY LI+ C G W+
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
+A + + +MIE K + P + ++ + G+L + E+L ++MV R
Sbjct: 309 DASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 164/358 (45%), Gaps = 5/358 (1%)
Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
+I+ C +H L + RP V Y +I+ ++ A + M
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVT----YSSLISCLCNYGRWSDASRLLSDM 317
Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
R + V TFS L+ +V+ G EA ++ M + P + +S +I+ C R
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 235 SEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
EA+ F+ + K PDV+ Y L++G+C+ + E VFREM G+ N TY+I+
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
I L + G A ++F EM+ G PN +T+N L+ K + EK + V+ ++R
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
E TYN +I+ CK GK+ED + ++ KG P+ +N + + G A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
++ +MK+ PN+ YN L++ + +L KEM + +T ++ M
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 194/426 (45%), Gaps = 9/426 (2%)
Query: 110 STVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDL-YHEMINLAG--KVRQFDL 166
ST + + +S VR + F W R F Y E ++ G +++ D
Sbjct: 9 STAKRFVHRSLVVRGNAATVSPSFSFFW---RRAFSGKTSYDYREKLSRNGLSELKLDDA 65
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
F +++KSR ++ FS L+ + + +M+ G + +SI+I+
Sbjct: 66 VALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
CR+ + A + + K +EP+++ ++L+ G+C + ISEA + +M + G QP
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
N T++ +I L + + A + M+ GC+P+ +T+ ++ K T+ +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
N+M++ E + YN +ID CK ++DA+ + M KG PN T++ + C+
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
G + A R+ M + K P+ T++ L+ F KL EM + ++P++ TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
LI +C + A + M+ + C P Y +++ + ++++ E+ +M
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 526 DRGFTA 531
RG
Sbjct: 424 QRGLVG 429
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ +++ K + + A + ++ +E T+ T++I++ +AG + F +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIS 269
G PD +A++ +IS CRK EA + F +K D P+ Y L+R R G+
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL 297
+ + +EM+ G + T +V + L
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTNML 616
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 21/364 (5%)
Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
F+ Y +++N + +LA+ + MK + V T++I+V + +AGL +A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGW 262
FN M E GC P+ + ++ +I + ++ S A F++ L + P+++ Y+ L+ G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 263 CRAGNISEAERVFREMKMAGIQ------------------PNVYTYSIVIDALCRCGQIT 304
C+AG + +A ++F +M G + PNV TY ++D C+ ++
Sbjct: 599 CKAGQVEKACQIFE--RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
A + M GCEPN I ++ L+ K + ++ +V +M G A TY+ LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
D + K + + A KVL+ M+ C PN + + + K+G + A+++ M++ C+
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
PN VTY ++ F + L+L + M V PN TYR+LI C G + A+
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 485 IREM 488
+ EM
Sbjct: 837 LEEM 840
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 26/386 (6%)
Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
DLA M + V + S R AG +A M G PD +S
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 224 VISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
V++ LC + A F+ +K DV YT +V +C+AG I +A + F EM+ G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVL 342
PNV TY+ +I A + +++ A+++F ML GC PN +T++ L+ H KA + EK
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 343 QVYNQMKRLGCEA--------------------DTITYNFLIDCHCKDGKLEDAIKVLNS 382
Q++ +M C + + +TY L+D CK ++E+A K+L++
Sbjct: 609 QIFERM----CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 383 MVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKS 442
M +GC PN ++ + + K+G ++ A + +M + TY+ L+ + K
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYE 502
D+ K+ +M EN PNV Y +I C +G + AYK + +M+EEK +P Y
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK-LMQMMEEKGCQPNVVTYT 783
Query: 503 MVLQQLRRAGQLQKHEELVEKMVDRG 528
++ G+++ EL+E+M +G
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKG 809
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 177/411 (43%), Gaps = 24/411 (5%)
Query: 144 FVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
FV Y ++I+ + F+ A F++ M++ + V T+S L+ +
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGW 262
N M GC P F+ ++ C S A + K P +VY L+
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 263 CRAGN------ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
C + + AE+ + EM AG+ N S LC G+ +A V EM+
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
G P++ T++ ++ AS+ E ++ +MKR G AD TY ++D CK G +E A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 377 IKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILM-- 434
K N M GC PN T+ + K V+ A+ ++ M C PN VTY+ L+
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 435 -----------QMF---ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
Q+F SK V K+ ++N PNV TY L+ +C
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
A K + M E C +P VY+ ++ L + G+L + +E+ +M + GF A
Sbjct: 658 ARKLLDAMSMEGC-EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 181/442 (40%), Gaps = 50/442 (11%)
Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
V+SFF W + + H+ +Y+ +++L + + F+ ++ + E+ + ++LV
Sbjct: 148 VISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLV 207
Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISI----------------------- 227
R++ R G + A+ R++++ P + ++ +I
Sbjct: 208 RKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLR 267
Query: 228 ------------LCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
LC+ + EA + ++ + F PD + YT L+ G C A EA
Sbjct: 268 MDGFTLRCFAYSLCKVGKWREALTLVET--ENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
Query: 276 REMKMAGIQPNVYTYSIVIDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
M+ PNV TYS + LC C Q+ R V M+ GC P+ FN+L+ +
Sbjct: 326 NRMRATSCLPNVVTYSTL---LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK------LEDAIKVLNSMVRK 386
+ ++ +M + G + YN LI C D L+ A K + M+
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMV 446
G N + RC+ G A + +M P+T TY+ ++ + ++
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 447 LKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQ 506
L +EM+ + +V TY I++ +C G A K+ EM E C P Y ++
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC-TPNVVTYTALIH 561
Query: 507 QLRRAGQLQKHEELVEKMVDRG 528
+A ++ EL E M+ G
Sbjct: 562 AYLKAKKVSYANELFETMLSEG 583
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 161/372 (43%), Gaps = 20/372 (5%)
Query: 141 RPEFVHSPDLYHEMINLAG-KVRQFDL---AWHFIDLMKSRNVEITVDT---------FS 187
+ + + S L H ++LA ++ F L A+ + K R V+T ++
Sbjct: 247 KADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYT 306
Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-D 246
L+ A L EA+ NRM C P+ + +S ++ K++ + + + +
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALC------RC 300
P ++ +LV +C +G+ S A ++ ++M G P Y+I+I ++C C
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
+ A ++EML G N I ++ R A + EK V +M G DT TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
+ +++ C K+E A + M R G + T+ ++ K G + A + + +M++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
+ C PN VTY L+ + +K +L + M PN+ TY LI +C G
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 481 AYKYIREMIEEK 492
A + M K
Sbjct: 607 ACQIFERMCGSK 618
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 38/283 (13%)
Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
+Y +I+ KV + D A M T+ T+S L+ RY + A ++M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNI 268
E CAP+ + ++ +I LC+ + EA +++K +P+V+ YT ++ G+ G I
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-------------- 314
+ M G+ PN TY ++ID C+ G + AH++ EM
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 315 ----------------EVGCEPNSITFNNLMRVHV----KASRTEKVLQVYNQMKRLGCE 354
E+G + ++ F ++ R+ + KA R E L++ ++
Sbjct: 856 IEGFNKEFIESLGLLDEIG-QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 355 A--DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
+ TYN LI+ C K+E A ++ + M +KG P +F
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 108/242 (44%), Gaps = 5/242 (2%)
Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
+Y EMI+ KV + D A+ + +M+ + + V T++ ++ + G + RM
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPD-VIVYTNLVRGWCRAGNI 268
G AP+ + + ++I C+ A + + +K P Y ++ G+ +
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EF 863
Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCE--PNSITFN 326
E+ + E+ P + Y ++ID L + ++ A + E+ S T+N
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 923
Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
+L+ A++ E Q++++M + G + ++ LI ++ K+ +A+ +L+ +
Sbjct: 924 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
Query: 387 GC 388
C
Sbjct: 984 VC 985
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 221/485 (45%), Gaps = 31/485 (6%)
Query: 53 SPEETLISEKFHSLIKDHHRKNPNPSSNSNPSLNPDFTIPS-----LSLGFSQISTAHSI 107
SP ++L+++K + +K H + + S+N P + + S L L F + H
Sbjct: 18 SPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQF 77
Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQ--FD 165
+ C H +L + E V + L E +L K Q +D
Sbjct: 78 ------FTLRCKCITLH---ILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYD 128
Query: 166 LAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVI 225
L + T F ++V+ Y R L +A+ + + +G P ++++ V+
Sbjct: 129 LCYS------------TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL 176
Query: 226 SILCR-KRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
R KR S A++ F + L+ + P+V Y L+RG+C AGNI A +F +M+ G
Sbjct: 177 DATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGC 236
Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
PNV TY+ +ID C+ +I + M G EPN I++N ++ + R ++V
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
V +M R G D +TYN LI +CK+G A+ + M+R G P+ T+ + +
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
K G++N A +M+ PN TY L+ F+ + ++ +EM +N P+V
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
TY LI +C G +A + +M +EK L P Y VL R+ + + + +
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 524 MVDRG 528
MV++G
Sbjct: 476 MVEKG 480
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 179/361 (49%), Gaps = 2/361 (0%)
Query: 165 DLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIV 224
D+A D M+++ V T++ L+ Y + + M G P+ I++++V
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 225 ISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGI 283
I+ LCR+ R E + + + D + Y L++G+C+ GN +A + EM G+
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 284 QPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQ 343
P+V TY+ +I ++C+ G + RA + +M G PN T+ L+ + + +
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 344 VYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCIS 403
V +M G +TYN LI+ HC GK+EDAI VL M KG +P+ +++ +
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 404 KLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVN 463
+ DV+ A R+ +M + +P+T+TY+ L+Q F + T L +EM + P+
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 464 TYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEK 523
TY LI YC G A + EM+E+ L P Y +++ L + + ++ + L+ K
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVL-PDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 524 M 524
+
Sbjct: 581 L 581
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 22/349 (6%)
Query: 182 TVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF 241
+V T++ L+ +AG A+ ++M G P++ ++ ++ +K +EA
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 242 DSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRC 300
+ D F P V+ Y L+ G C G + +A V +MK G+ P+V +YS V+ CR
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
+ A V EM+E G +P++IT+++L++ + RT++ +Y +M R+G D TY
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 361 NFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKD 420
LI+ +C +G LE A+++ N MV KG P+ T++++ ++K A R+ K+
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 421 LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNN 480
+ P+ VTY+ L+ EN + LI +C G
Sbjct: 584 EESVPSDVTYHTLI--------------------ENCSNIEFKSVVSLIKGFCMKGMMTE 623
Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
A + M+ K KP + Y +++ RAG ++K L ++MV GF
Sbjct: 624 ADQVFESML-GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 51/286 (17%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ +IN + + A ++ MK + + V ++S ++ + R+ EA+ M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIS 269
E G PD I +S +I C +RR EA ++ L+ PD YT L+ +C G++
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDAL-------------------------------- 297
+A ++ EM G+ P+V TYS++I+ L
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 298 ------------------CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTE 339
C G +T A VF ML +P+ +N ++ H +A
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 340 KVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR 385
K +Y +M + G T+T L+ K+GK+ + V+ ++R
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC-ISKLGDVNGA 411
C + + ++ ++ + + ++ A+ +++ G P ++N + I +++ A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 412 HRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
++ +M + + PN TYNIL++ F + + D+ L L +ME PNV TY LI
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 472 YCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
YC + ++ +K +R M K L+P Y +V+ L R G++++ ++ +M RG++
Sbjct: 250 YCKLRKIDDGFKLLRSM-ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 39/145 (26%)
Query: 219 IAFSIVISIL---CRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERV 274
I F V+S++ C K +EA F+S+ K +PD Y ++ G CRAG+I +A +
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 275 FREMKMAGIQPNVYTYSIVIDALCRCGQITRAH--------------------------- 307
++EM +G + T ++ AL + G++ +
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHR 722
Query: 308 --------DVFAEMLEVGCEPNSIT 324
DV AEM + G PN I+
Sbjct: 723 EGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 5/380 (1%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ +IN + +F +A + M E V T S L+ + + +A+ ++ME
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
E G PD + ++ +I C+ ++A FD + +D D + Y +LV G C +G S
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
+A R+ R+M M I PNV T++ VID + G+ + A ++ EM +P+ T+N+L+
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
R ++ Q+ + M GC D +TYN LI+ CK ++++ K+ M ++G
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
+ T+N I + + G + A ++ +M PN TY+IL+ + + L L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVL 403
Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
+ M+++E+E ++ TY I+I C +G+ +A+ R + K LKP Y ++
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVSYTTMISGFC 462
Query: 510 RAGQLQKHEELVEKMVDRGF 529
R Q K + L KM + G
Sbjct: 463 RKRQWDKSDLLYRKMQEDGL 482
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 173/356 (48%), Gaps = 6/356 (1%)
Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
F +++SR + VD FS ++ + ++ + F+ ME G D +++IVI+ LC
Sbjct: 57 FCKMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
R R A S + K +EPDV+ ++L+ G+C+ + +A + +M+ G +P+V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
Y+ +ID C+ G + A ++F M G +++T+N+L+ + R ++ M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
+ IT+ +ID K+GK +A+K+ M R+ +P+ T+N + + G V
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
+ A +M M C P+ VTYN L+ F SK D KL +EM + + + TY +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
I Y G + A +E+ +P Y ++L L +++K L E M
Sbjct: 356 IQGYFQAGRPDAA----QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 147/296 (49%), Gaps = 1/296 (0%)
Query: 236 EAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVID 295
E F ++ + P ++ ++ ++ ++ N +F M++ GI ++Y+Y+IVI+
Sbjct: 53 EIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN 112
Query: 296 ALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEA 355
LCRC + A V +M++ G EP+ +T ++L+ + +R + + ++M+ +G
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172
Query: 356 DTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
D + YN +ID CK G + DA+++ + M R G +A T+N + + G + A R+
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 416 GKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGM 475
M PN +T+ ++ +F +KL +EM V+P+V TY LI C
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 476 GHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
G + A + + M+ + CL P Y ++ ++ ++ + +L +M RG
Sbjct: 293 GRVDEAKQMLDLMVTKGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 165/354 (46%), Gaps = 37/354 (10%)
Query: 143 EFVHSPDLY--HEMIN-LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLA 199
+F + PD+ +IN R FD A + M+ V ++ ++ + GL
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 200 AEAVHAFNRMEEYGCAPDKIAF-SIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNL 258
+AV F+RME G D + + S+V + C R + A+ D + P+VI +T +
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 259 VRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGC 318
+ + + G SEA +++ EM + P+V+TY+ +I+ LC G++ A + M+ GC
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 319 EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCH----------- 367
P+ +T+N L+ K+ R ++ +++ +M + G DTITYN +I +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 368 ---------------------CKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLG 406
C + ++E A+ + +M + + +T+N++ + K+G
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 407 DVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEP 460
+V A ++ + +P+ V+Y ++ F + D L ++M+E+ + P
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 194/393 (49%), Gaps = 4/393 (1%)
Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
F + V +RP S ++++++ K+ +F+L + M++ + + T+SI + +
Sbjct: 71 FGDMVKSRP--FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
R + A+ +M + G PD + S +++ C +R S+A + D + + ++PD
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
+T L+ G SEA + +M G QP++ TY V++ LC+ G I A ++ +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
M + N + FN ++ K E + ++ +M+ G + +TYN LI+C C G+
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
DA ++L++M+ K NPN TFN + K G + A +++ +M +P+T+TYN+
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
L+ F D ++ K M + PN+ TY LI +C + + REM ++
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQR 427
Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
L + Y ++Q +AG + + ++MV
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 180/376 (47%), Gaps = 32/376 (8%)
Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
TF+ L+ A+EAV ++M + GC PD + + V++ LC++ A + + +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Query: 245 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
+ + + +V+++ ++ C+ ++ A +F EM+ GI+PNV TY+ +I+ LC G+
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
+ A + + MLE PN +TFN L+ K + + +++ +M + + DTITYN L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
I+ C +L++A ++ MV K C PN T+N + K V ++ +M
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA-- 481
NTVTY ++Q F + D + K+M N V ++ TY IL+ C G + A
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 482 -YKYIRE------------MIEEKC----------------LKPGSSVYEMVLQQLRRAG 512
+KY+++ MIE C +KP Y ++ L
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKR 549
Query: 513 QLQKHEELVEKMVDRG 528
LQ+ ++L KM + G
Sbjct: 550 LLQEADDLFRKMKEDG 565
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 151/288 (52%), Gaps = 1/288 (0%)
Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
F D +K + P ++ + L+ + + +M+ GI ++YTYSI I+ CR
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
Q++ A V A+M+++G EP+ +T ++L+ + + R + + +QM +G + DT T
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
+ LI K +A+ +++ MV++GC P+ T+ + + K GD++ A + KM+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
+ + N V +N ++ + ++ + L EME + PNV TY LI C G W+
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
+A + + M+E+K + P + ++ + G+L + E+L E+M+ R
Sbjct: 311 DASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 159/360 (44%), Gaps = 41/360 (11%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PDL Y ++N K DLA + ++ M++ ++ V F+ ++ + AV
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSF---------------FDSLKDKF-- 248
F ME G P+ + ++ +I+ LC R S+A F++L D F
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 249 -------------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYT 289
+PD I Y L+ G+C + EA+++F+ M PN+ T
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
Y+ +I+ C+C ++ ++F EM + G N++T+ +++ +A + V+ QM
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVN 409
D +TY+ L+ C GKL+ A+ + + + N +N + + K G V
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 410 GAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILI 469
A ++ L +P+ VTYN ++ + + L ++M+E+ PN TY LI
Sbjct: 521 EAWDLFCS---LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 156/358 (43%), Gaps = 8/358 (2%)
Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
+I+ C RH + + + RP V Y+ +IN ++ A + M
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT----YNSLINCLCNYGRWSDASRLLSNM 319
Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
+ + V TF+ L+ + + G EA M + PD I ++++I+ C R
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 235 SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
EA+ F + K P++ Y L+ G+C+ + + +FREM G+ N TY+ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGC 353
I + G A VF +M+ + +T++ L+ + + L ++ +++
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 354 EADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHR 413
E + YN +I+ CK GK+ +A + S+ K P+ T+N + + + A
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADD 556
Query: 414 MYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
++ KMK+ PN+ TYN L++ +L KEM + + +T ++ M
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 5/227 (2%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ +IN K ++ + M R + T++ +++ + +AG A F +M
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
D + +SI++ LC + A F L K + E ++ +Y ++ G C+AG +
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
EA +F + I+P+V TY+ +I LC + A D+F +M E G PNS T+N L+
Sbjct: 521 EAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
R +++ ++ +M+ G D T + L+ DG+L+ +
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKS 623
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 200/381 (52%), Gaps = 6/381 (1%)
Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
MI L + R D+ + + ++++ R ++ V TF++++ + G +A M+ YG
Sbjct: 195 MIALLKENRSADVEYVYKEMIR-RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFE----PDVIVYTNLVRGWCRAGNIS 269
C+P+ ++++ +I C+ + LK+ E P++ + L+ G+ + N+
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
+ +VF+EM ++PNV +Y+ +I+ LC G+I+ A + +M+ G +PN IT+N L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
K ++ L ++ +K G T YN LID +CK GK++D + M R+G
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
P+ T+N + + + G++ A +++ ++ K P+ VT++ILM+ + + L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAML 492
Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
KEM + ++P TY I++ YC G+ A +M +E+ L+ + Y ++LQ
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 510 RAGQLQKHEELVEKMVDRGFT 530
+ G+L+ L+ +M+++G
Sbjct: 553 QKGKLEDANMLLNEMLEKGLV 573
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 190/424 (44%), Gaps = 23/424 (5%)
Query: 132 LSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFID-----------------LM 174
L +++W+ + S +L ++++ +++ F+D +
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 144
Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
NV + +LV Y AF R YG ++ ++ L ++ R+
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRS 204
Query: 235 SEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
++ + + + ++ K +P+V + ++ C+ G +++A V +MK+ G PNV +Y+ +
Sbjct: 205 ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264
Query: 294 IDALCRC---GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR 350
ID C+ G++ +A V EM+E PN TFN L+ K ++V+ +M
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324
Query: 351 LGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNG 410
+ + I+YN LI+ C GK+ +AI + + MV G PN T+N + K +
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 411 AHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
A M+G +K P T YN+L+ + D LK+EME + P+V TY LI
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 471 MYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
C G+ A K ++ + P + ++++ R G+ +K L+++M G
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 531 ARPL 534
R L
Sbjct: 503 PRHL 506
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 156/329 (47%), Gaps = 4/329 (1%)
Query: 142 PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAE 201
P V L L G + + A + M +V + TF+IL+ + +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYK-ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 202 AVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVR 260
++ F M + P+ I+++ +I+ LC + SEA S D + +P++I Y L+
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 261 GWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEP 320
G+C+ + EA +F +K G P Y+++IDA C+ G+I + EM G P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 321 NSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVL 380
+ T+N L+ + E ++++Q+ G D +T++ L++ +C+ G+ A +L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 381 NSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKM-KDLKCEPNTVTYNILMQMFAT 439
M + G P T+N++ + K G++ A M +M K+ + N +YN+L+Q ++
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
+ L EM E + PN TY I+
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 136/264 (51%), Gaps = 3/264 (1%)
Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
M ++V+ V +++ L+ G +EA+ ++M G P+ I ++ +I+ C+
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 234 ASEAQSFFDSLKDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
EA F S+K + P +Y L+ +C+ G I + + EM+ GI P+V TY+
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
+I LCR G I A +F ++ G P+ +TF+ LM + + + K + +M ++G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCNPNASTFNMIFRCISKLGDVNGA 411
+ +TYN ++ +CK+G L+ A + M + + N +++N++ + S+ G + A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 412 HRMYGKMKDLKCEPNTVTYNILMQ 435
+ + +M + PN +TY I+ +
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKE 584
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 167/356 (46%), Gaps = 5/356 (1%)
Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
MK E V T+++L++ + A M GC PD ++++ VIS +C
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 234 ASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIV 293
E + L ++FEP V VY L+ G C+ + A + REM GI PNV +YS +
Sbjct: 232 VKEGRE----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 294 IDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKR-LG 352
I+ LC GQI A +ML+ GC PN T ++L++ T L ++NQM R G
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
+ + + YN L+ C G + A+ V + M GC+PN T+ + +K G ++GA
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
++ KM C PN V Y +++ L + M + P+V T+ I
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
C G + A K R+M ++ P Y +L L +A ++++ L ++ RG
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 169/350 (48%), Gaps = 8/350 (2%)
Query: 180 EITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQS 239
E V ++ L+ + A M E G +P+ I++S +I++LC + A S
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 240 FFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM-KMAGIQPNVYTYSIVIDAL 297
F LK P++ ++LV+G G +A ++ +M + G+QPNV Y+ ++
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 298 CRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADT 357
C G I +A VF+ M E+GC PN T+ +L+ K + + ++N+M GC +
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 358 ITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGK 417
+ Y +++ C+ K ++A ++ M ++ C P+ TFN + + G ++ A +++ +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 418 MKDL-KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMG 476
M+ +C PN VTYN L+ A + + L +E+ VE + +TY L+ C G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 477 HWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
A + + +M+ + G S E+ + + A Q E +M+D
Sbjct: 543 LPGIALQLVGKMMVD-----GKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 6/314 (1%)
Query: 164 FDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSI 223
FD + +++ ++ V ++ LV+ + G +AV F+ MEE GC+P+ +
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392
Query: 224 VISILCRKRRASEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG 282
+I+ ++ A ++ L P+V+VYTN+V CR EAE + M
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 283 IQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG-CEPNSITFNNLMRVHVKASRTEKV 341
P+V T++ I LC G++ A VF +M + C PN +T+N L+ KA+R E+
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
+ ++ G E + TYN L+ C G A++++ M+ G +P+ T NMI
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILA 572
Query: 402 ISKLGDVNGAHRMYGKMK--DLKCEPNTVTY-NILMQMFATSKSTDMVLKLKKEMEENEV 458
K G A +M + K P+ ++Y N++ + ++ D V+ L++ M +
Sbjct: 573 YCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLER-MISAGI 631
Query: 459 EPNVNTYRILITMY 472
P++ T+ +LI +
Sbjct: 632 VPSIATWSVLINCF 645
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 138/299 (46%), Gaps = 9/299 (3%)
Query: 237 AQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
A FF S+ + F+ + + ++R G + + + ++MK+ G + + VI
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
+ G RA ++F + E GC+P+ +N+++ + +R + + VY MKR G E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
+ TYN L+ CK+ K++ A K+L M KGC P+A ++ + + ++G V +
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCG 474
+ EP YN L+ +L +EM E + PNV +Y LI + C
Sbjct: 239 AERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 475 MGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
G A+ ++ +M++ C P +++ G +L +M+ RGF +P
Sbjct: 294 SGQIELAFSFLTQMLKRGC-HPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQP 350
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 40/272 (14%)
Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
+ T+ L+ + + G AV+ +N+M GC P+ + ++ ++ LCR + EA+S +
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Query: 243 SL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAG-IQPNVYTYSIVIDALCRC 300
+ K+ P V + ++G C AG + AE+VFR+M+ PN+ TY+ ++D L +
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506
Query: 301 GQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY 360
+I A+ + E+ G E +S T+N L+ A LQ+ +M G D IT
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 361 NFLIDCHCKDGKLE-------------------------------------DAIKVLNSM 383
N +I +CK GK E D + +L M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMY 415
+ G P+ +T++++ C L D+ AH +
Sbjct: 627 ISAGIVPSIATWSVLINCFI-LDDIVRAHDQF 657
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+E+++ K + + A+ + R VE + T++ L+ AGL A+ +M
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL---KDKFEPDVIVYTNLVRGWCRAGN 267
G +PD+I +++I C++ +A A D + + K+ PDVI YTN++ G CR+
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNC 615
Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
+ + M AGI P++ T+S++I+ I RAHD F
Sbjct: 616 REDGVILLERMISAGIVPSIATWSVLINCFIL-DDIVRAHDQFT 658
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 175/337 (51%), Gaps = 2/337 (0%)
Query: 185 TFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL 244
TF+ L+ R A+EAV +RM GC PD + + IV++ LC++ A S +
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 245 -KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
+ K EP V++Y ++ C N+++A +F EM GI+PNV TY+ +I LC G+
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
+ A + ++M+E PN +TF+ L+ VK + + ++Y++M + + D TY+ L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
I+ C +L++A + M+ K C PN T+N + + K V+ ++ +M
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
NTVTY L+ F ++ D + K+M + V P++ TY IL+ C G A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL- 486
Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
+ E ++ ++P Y ++++ + +AG+++ +L
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 2/371 (0%)
Query: 146 HSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
H+ Y +IN + Q LA + M E + T + L+ + ++AV
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
+M E G PD F+ +I L R RASEA + D + K +PD++ Y +V G C+
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
G+I A + ++M+ I+P V Y+ +IDALC + A ++F EM G PN +T
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
+N+L+R R ++ + M + +T++ LID K+GKL +A K+ + M+
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
++ +P+ T++ + ++ A M+ M C PN VTYN L++ F +K D
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
++L +EM + + N TY LI + +NA ++M+ + L P Y ++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSIL 472
Query: 505 LQQLRRAGQLQ 515
L L G+++
Sbjct: 473 LDGLCNNGKVE 483
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 153/288 (53%), Gaps = 1/288 (0%)
Query: 240 FFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCR 299
F D +K + P ++ ++ L+ + + +M+ GI N+YTYSI+I+ CR
Sbjct: 69 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR 128
Query: 300 CGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTIT 359
Q++ A V A+M+++G EP+ +T N+L+ +R + + QM +G + D+ T
Sbjct: 129 RSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT 188
Query: 360 YNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
+N LI + + +A+ +++ MV KGC P+ T+ ++ + K GD++ A + KM+
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 420 DLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWN 479
K EP V YN ++ K+ + L L EM+ + PNV TY LI C G W+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 480 NAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
+A + + +MIE K + P + ++ + G+L + E+L ++M+ R
Sbjct: 309 DASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 4/396 (1%)
Query: 134 FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRY 193
F + V +RP S + ++++ K+ +FDL + M++ + + T+SIL+ +
Sbjct: 69 FGDMVKSRP--FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCF 126
Query: 194 VRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKD-KFEPDV 252
R + A+ +M + G PD + + +++ C R S+A S + + ++PD
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 253 IVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAE 312
+ L+ G R SEA + M + G QP++ TY IV++ LC+ G I A + +
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 313 MLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGK 372
M + EP + +N ++ L ++ +M G + +TYN LI C C G+
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 373 LEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNI 432
DA ++L+ M+ + NPN TF+ + K G + A ++Y +M +P+ TY+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 433 LMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEK 492
L+ F D + + M + PNV TY LI +C + + REM ++
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQR 425
Query: 493 CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
L + Y ++ +A + + + ++MV G
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 182/405 (44%), Gaps = 14/405 (3%)
Query: 139 TARPEFVHSP-----------DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
TA P F H D IN ++ D F D++KSR V+ FS
Sbjct: 27 TAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVE-FS 85
Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KD 246
L+ + + +M+ G + + +SI+I+ CR+ + S A + + K
Sbjct: 86 KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL 145
Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
+EPD++ +L+ G+C IS+A + +M G QP+ +T++ +I L R + + A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
+ M+ GC+P+ +T+ ++ K + L + +M++ E + YN +ID
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
C + DA+ + M KG PN T+N + RC+ G + A R+ M + K PN
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
VT++ L+ F KL EM + ++P++ TY LI +C + A
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
MI + C P Y +++ +A ++ + EL +M RG
Sbjct: 386 LMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 3/368 (0%)
Query: 150 LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRM 209
+Y+ +I+ + + A + M ++ + V T++ L+R G ++A + M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 210 EEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNI 268
E P+ + FS +I ++ + EA+ +D + K +PD+ Y++L+ G+C +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 269 SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
EA+ +F M PNV TY+ +I C+ ++ ++F EM + G N++T+ L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
+ +A + V+ QM G D +TY+ L+D C +GK+E A+ V + R
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
P+ T+N++ + K G V ++ + +PN VTY +M F +
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
L +EM+E P+ TY LI + G + + IREM C G + ++ +
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSCRFVGDASTIGLVTNM 615
Query: 509 RRAGQLQK 516
G+L K
Sbjct: 616 LHDGRLDK 623
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 166/395 (42%), Gaps = 44/395 (11%)
Query: 94 LSLGFSQISTAHSISPSTVRH--VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLY 151
L+L + I P V + +I+ C ++ L + + + RP V Y
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT----Y 294
Query: 152 HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEE 211
+ +I ++ A + M R + V TFS L+ +V+ G EA ++ M +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 212 YGCAPDKIAFSIVISILCRKRRASEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNIS 269
PD +S +I+ C R EA+ F+ + KD F P+V+ Y L++G+C+A +
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVD 413
Query: 270 EAERVFREMKMAG-----------------------------------IQPNVYTYSIVI 294
E +FREM G + P++ TYSI++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCE 354
D LC G++ A VF + EP+ T+N ++ KA + E ++ + G +
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 355 ADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRM 414
+ +TY ++ C+ G E+A + M +G P++ T+N + R + GD + +
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 415 YGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
+M+ + + T ++ M + LK+
Sbjct: 594 IREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKM 628
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 2/378 (0%)
Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
M+N K + + F+ ++ + V + T++ L+ Y GL EA N M G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 272
+P ++ VI+ LC+ + A+ F + L+ PD Y +L+ C+ G++ E E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
+VF +M+ + P++ +S ++ R G + +A F + E G P+++ + L++ +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
+ + + N+M + GC D +TYN ++ CK L +A K+ N M + P++
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
T ++ KLG++ A ++ KMK+ + + VTYN L+ F D ++ +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
M E+ P +Y IL+ C GH A++ EMI K +KP + +++ R+G
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI-SKNIKPTVMICNSMIKGYCRSG 599
Query: 513 QLQKHEELVEKMVDRGFT 530
E +EKM+ GF
Sbjct: 600 NASDGESFLEKMISEGFV 617
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 190/399 (47%), Gaps = 6/399 (1%)
Query: 135 FNWVTARPEFVHSPDLY--HEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
F + A P SP +Y + +IN K +++ A M + T+ L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 193 YVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPD 251
+ G E F+ M PD + FS ++S+ R +A +F+S+K+ PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 252 VIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFA 311
++YT L++G+CR G IS A + EM G +V TY+ ++ LC+ + A +F
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 312 EMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDG 371
EM E P+S T L+ H K + ++++ +MK D +TYN L+D K G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 372 KLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYN 431
++ A ++ MV K P +++++ + G + A R++ +M +P + N
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 432 ILMQMFATS-KSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
+++ + S ++D L+K + E V P+ +Y LI + + + A+ +++M E
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFV-PDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 491 EK-CLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
E+ L P Y +L R Q+++ E ++ KM++RG
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 167/348 (47%), Gaps = 4/348 (1%)
Query: 184 DTFSILVRRYVRAGLA-AEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
D S L+R R+G++ E V++ + C + F ++I + R+ EA F
Sbjct: 131 DAQSCLLRMIRRSGVSRLEIVNSLDSTFS-NCGSNDSVFDLLIRTYVQARKLREAHEAFT 189
Query: 243 SLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
L+ K F + L+ R G + A V++E+ +G+ NVYT +I+++ALC+ G
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN 361
++ + +++ E G P+ +T+N L+ + E+ ++ N M G TYN
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 362 FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDL 421
+I+ CK GK E A +V M+R G +P+++T+ + K GDV +++ M+
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
P+ V ++ +M +F S + D L ++E + P+ Y ILI YC G + A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 482 YKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
EM+++ C Y +L L + L + ++L +M +R
Sbjct: 430 MNLRNEMLQQGCAMD-VVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 169/348 (48%), Gaps = 5/348 (1%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PDL + M++L + D A + + +K + ++IL++ Y R G+ + A++
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCR 264
N M + GCA D + ++ ++ LC+++ EA F+ + ++ PD T L+ G C+
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
GN+ A +F++MK I+ +V TY+ ++D + G I A +++A+M+ P I+
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
++ L+ + +V+++M + + N +I +C+ G D L M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK--CEPNTVTYNILMQMFATSKS 442
+G P+ ++N + + +++ A + KM++ + P+ TYN ++ F
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 443 TDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIE 490
+ ++M E V P+ +TY +I + + A++ EM++
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 135/279 (48%), Gaps = 12/279 (4%)
Query: 122 VRHGIPLLQVLS----FFNWVTARPEFVHSPDLYHEMINLAGKVRQFDL--AWHFIDLMK 175
+ HG+ ++L FN +T R F PD Y I + G + +L A MK
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALF---PDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 176 SRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRAS 235
+ + + V T++ L+ + + G A + M P I++SI+++ LC K +
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 236 EAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
EA +D + K +P V++ ++++G+CR+GN S+ E +M G P+ +Y+ +I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 295 DALCRCGQITRAHDVFAEMLE--VGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
R +++A + +M E G P+ T+N+++ + ++ ++ V +M G
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPN 391
D TY +I+ L +A ++ + M+++G +P+
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/191 (18%), Positives = 76/191 (39%), Gaps = 18/191 (9%)
Query: 357 TITYNFLIDCHCKDGKLEDAIKVLNSMVRKG-----------------CNPNASTFNMIF 399
+++ + +I + G+L DA L M+R+ C N S F+++
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172
Query: 400 RCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVE 459
R + + AH + ++ + N L+ ++ + +E+ + V
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 460 PNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEE 519
NV T I++ C G ++ + ++EK + P Y ++ G +++ E
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQ-VQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 520 LVEKMVDRGFT 530
L+ M +GF+
Sbjct: 292 LMNAMPGKGFS 302
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 183/365 (50%), Gaps = 2/365 (0%)
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
A +D M + TF+ L+ A+EAV ++M + GC PD + + V++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
LC++ A S + K K E DV++Y ++ G C+ ++ +A +F EM GI+P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
+V+TYS +I LC G+ + A + ++M+E PN +TF+ L+ VK + + ++Y
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
++M + + D TY+ LI+ C +L++A + M+ K C PN T++ + + K
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
V ++ +M NTVTY L+ F ++ D + K+M V PN+ TY
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
IL+ C G A + E ++ ++P Y ++++ + +AG+++ EL +
Sbjct: 472 NILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 526 DRGFT 530
+G +
Sbjct: 531 LKGVS 535
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 192/387 (49%), Gaps = 4/387 (1%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PDL Y ++N K DLA + M+ +E V ++ ++ + +A++
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
F M+ G PD +S +IS LC R S+A D ++ K P+V+ ++ L+ + +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
G + EAE+++ EM I P+++TYS +I+ C ++ A +F M+ C PN +T
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
++ L++ KA R E+ ++++ +M + G +T+TY LI + ++A V MV
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
G +PN T+N++ + K G + A ++ ++ EP+ TYNI+++ + +
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
+L + V PNV Y +I+ +C G A +++M E+ L P S Y +
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTL 579
Query: 505 LQQLRRAGQLQKHEELVEKMVDRGFTA 531
++ R G + EL+++M GF
Sbjct: 580 IRARLRDGDREASAELIKEMRSCGFAG 606
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 194/407 (47%), Gaps = 8/407 (1%)
Query: 131 VLSFFNWVTA---RPEFVHSPDLYHEMIN--LAGKVRQFDLAWHFIDLMKSRNVEITVDT 185
V SFFN + F + Y E++ L+ ++ D F D++KSR V+
Sbjct: 27 VPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE- 85
Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL- 244
F+ L+ + + +M+ G + D +SI I+ CR+ + S A + +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 245 KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQIT 304
K +EPD++ ++L+ G+C + IS+A + +M G +P+ +T++ +I L + +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 305 RAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLI 364
A + +M++ GC+P+ +T+ ++ K + L + +M++ EAD + YN +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCE 424
D CK ++DA+ + M KG P+ T++ + C+ G + A R+ M + K
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 425 PNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKY 484
PN VT++ L+ F KL EM + ++P++ TY LI +C + A
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 485 IREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
MI + C P Y +++ +A ++++ EL +M RG
Sbjct: 386 FELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 7/359 (1%)
Query: 115 VIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLM 174
+I+ C +H L + + + RP+ Y +I+ ++ A + M
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT----YSSLISCLCNYGRWSDASRLLSDM 319
Query: 175 KSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA 234
R + V TFS L+ +V+ G EA ++ M + PD +S +I+ C R
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 235 SEAQSFFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 292
EA+ F+ + KD F P+V+ Y+ L++G+C+A + E +FREM G+ N TY+
Sbjct: 380 DEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 293 VIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLG 352
+I + A VF +M+ VG PN +T+N L+ K + K + V+ ++R
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 353 CEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
E D TYN +I+ CK GK+ED ++ ++ KG +PN +N + + G A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITM 471
+ KMK+ PN+ TYN L++ + +L KEM + +T ++ M
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 145 VHSPDLYHEMINLAGKVRQFDLAWHFI--DLMKSRNVEITVDTFSILVRRYVRAGLAAEA 202
VH P++ I L G + LA + + ++ +E + T++I++ +AG +
Sbjct: 464 VH-PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 203 VHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRG 261
F + G +P+ IA++ +IS CRK EA S +K D P+ Y L+R
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 262 WCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDAL 297
R G+ + + +EM+ G + T +V + L
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>sp|Q9M8M3|PP136_ARATH Pentatricopeptide repeat-containing protein At1g80550,
mitochondrial OS=Arabidopsis thaliana GN=At1g80550 PE=2
SV=1
Length = 448
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 208/409 (50%), Gaps = 30/409 (7%)
Query: 130 QVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVD--TFS 187
+ L FFNWV F H+ + ++ +I++ GK +F+++W I+ M N E + TF
Sbjct: 63 KALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG-NTESVPNHVTFR 121
Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF---DSL 244
I+ +RYV A L EA+ A+++++++ D+ +F ++ LC + EA+ + +
Sbjct: 122 IVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVI 180
Query: 245 KDKFE-PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQI 303
+ F + ++ ++RGW + G + + +++M G+ ++++YSI +D +C+ G+
Sbjct: 181 GNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKP 240
Query: 304 TRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFL 363
+A ++ EM + + + +N ++R + E ++V+ +M+ GCE + T+N +
Sbjct: 241 WKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTI 300
Query: 364 IDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKC 423
I C+DG++ DA ++L+ M ++GC P++ T+ +F + K ++ ++G+M
Sbjct: 301 IKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGRMIRSGV 357
Query: 424 EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK 483
P TY +LM+ F VL + K M+E+ P+ Y +I G + A +
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMARE 417
Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTAR 532
Y EMI E+ L P ++ ELVEK +D R
Sbjct: 418 YEEEMI-ERGLSP------------------RRRPELVEKSLDETLVCR 447
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 186/382 (48%), Gaps = 2/382 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y ++ + K Q LA + M+ R +++ +SI++ + G A + FN ME
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCRAGNIS 269
G D I ++ +I C R + D +K K PDV+ ++ L+ + + G +
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
EAE + +EM GI P+ TY+ +ID C+ Q+ +A+ + M+ GC PN TFN L+
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
+ KA+ + L+++ +M G ADT+TYN LI C+ GKLE A ++ MV +
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
P+ ++ ++ + G+ A ++ K++ K E + YNI++ + D L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
+ V+P+V TY I+I C G + A R+M EE P Y ++++
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM-EEDGHSPNGCTYNILIRAHL 573
Query: 510 RAGQLQKHEELVEKMVDRGFTA 531
G K +L+E++ GF+
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSV 595
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 185/372 (49%), Gaps = 2/372 (0%)
Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
MIN + R+ LA+ + + E TFS L+ G +EA+ +RM E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
P I + +++ LC + S+A D + + F+P+ + Y +++ C++G + A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
+ R+M+ I+ + YSI+ID LC+ G + A ++F EM G + + I + L+R
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
A R + ++ M + D + ++ LIDC K+GKL +A ++ M+++G +P+
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
T+ + K ++ A+ M M C PN T+NIL+ + + D L+L ++
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
M V + TY LI +C +G A + +EM+ + ++P Y+++L L G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNG 471
Query: 513 QLQKHEELVEKM 524
+ +K E+ EK+
Sbjct: 472 EPEKALEIFEKI 483
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 149/281 (53%), Gaps = 1/281 (0%)
Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
P +I ++ L R + ++M++ GI N+YT SI+I+ CRC +++ A
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCK 369
+++++G EP+++TF+ L+ R + L++ ++M +G + IT N L++ C
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 370 DGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVT 429
+GK+ DA+ +++ MV G PN T+ + + + K G A + KM++ K + + V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 430 YNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMI 489
Y+I++ S D L EME + ++ Y LI +C G W++ K +R+MI
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 490 EEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 530
+ K + P + ++ + G+L++ EEL ++M+ RG +
Sbjct: 310 KRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 180/415 (43%), Gaps = 57/415 (13%)
Query: 149 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 208
DL+ EM + R D + F + +++ ++ +D +
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC--------------------KQ 97
Query: 209 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGN 267
ME G A + SI+I+ CR R+ S A S + K +EPD + ++ L+ G C G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 268 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNN 327
+SEA + M G +P + T + +++ LC G+++ A + M+E G +PN +T+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 328 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL-------------- 373
+++V K+ +T +++ +M+ + D + Y+ +ID CKDG L
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 374 ---------------------EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAH 412
+D K+L M+++ P+ F+ + C K G + A
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 413 RMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMY 472
++ +M P+TVTY L+ F D + M PN+ T+ ILI Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 473 CGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
C ++ + R+M + + + Y ++Q G+L+ +EL ++MV R
Sbjct: 398 CKANLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 152/310 (49%), Gaps = 1/310 (0%)
Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
++D + M R + V FS L+ +V+ G EA M + G +PD + ++
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
+I C++ + +A D + K P++ + L+ G+C+A I + +FR+M +
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKV 341
G+ + TY+ +I C G++ A ++F EM+ P+ +++ L+ EK
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 342 LQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRC 401
L+++ ++++ E D YN +I C K++DA + S+ KG P+ T+N++
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 402 ISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
+ K G ++ A ++ KM++ PN TYNIL++ KL +E++ +
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 462 VNTYRILITM 471
+T ++++ M
Sbjct: 597 ASTVKMVVDM 606
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 133/284 (46%), Gaps = 4/284 (1%)
Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
GK+R+ A M R + T++ L+ + + +A H + M GC P+
Sbjct: 331 GKLRE---AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
F+I+I+ C+ + F + + D + Y L++G+C G + A+ +F+E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
M ++P++ +Y I++D LC G+ +A ++F ++ + E + +N ++ AS+
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
+ ++ + G + D TYN +I CK G L +A + M G +PN T+N+
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSK 441
+ R GD + ++ ++K + T +++ M + +
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 87/222 (39%), Gaps = 36/222 (16%)
Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
A D+F EM P I F+ L V + + + VL + QM+ G + T + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
C C+ KL A + GK+ L EP
Sbjct: 116 CCCRCRKLSLAFSAM-----------------------------------GKIIKLGYEP 140
Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
+TVT++ L+ L+L M E +P + T L+ C G ++A I
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDR 527
M+E +P Y VL+ + ++GQ EL+ KM +R
Sbjct: 201 DRMVETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 4/380 (1%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PDL Y +IN K + DLA + ++ M+ +E V +S ++ + +A++
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
F M+ G PD +S +IS LC R S+A D L+ K P+V+ + +L+ + +
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
G + EAE++F EM I PN+ TY+ +I+ C ++ A +F M+ C P+ +T
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
+N L+ KA + ++++ M R G +T+TY LI + ++A V MV
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 385 RKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTD 444
G +PN T+N + + K G + A ++ ++ K EP+ TYNI+ + + +
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 445 MVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMV 504
L + V+P+V Y +I+ +C G AY +M E+ L P S Y +
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTL 561
Query: 505 LQQLRRAGQLQKHEELVEKM 524
++ R G EL+++M
Sbjct: 562 IRAHLRDGDKAASAELIKEM 581
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 178/355 (50%), Gaps = 2/355 (0%)
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
A +D M + TF+ LV + A+EAV RM GC PD + + VI+
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 227 ILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
LC++ A + + + K K E DV++Y+ ++ C+ ++ +A +F EM GI+P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
+V+TYS +I LC G+ + A + ++MLE PN +TFN+L+ K + + +++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
++M + + + +TYN LI+ C +L++A ++ MV K C P+ T+N + K
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
V ++ M NTVTY L+ F + D + K+M + V PN+ TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEEL 520
L+ C G A + E +++ ++P Y ++ + + +AG+++ +L
Sbjct: 454 NTLLDGLCKNGKLEKAM-VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 173/363 (47%), Gaps = 3/363 (0%)
Query: 170 FIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILC 229
F +++KSR V+ FS L+ + + +ME G + + ++I+I+ LC
Sbjct: 53 FGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 230 RKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVY 288
R+ + S A + + K + P ++ +L+ G+C ISEA + +M G QP+
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 289 TYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQM 348
T++ ++ L + + + A + M+ GC+P+ +T+ ++ K + L + N+M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
++ EAD + Y+ +ID CK ++DA+ + M KG P+ T++ + C+ G
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
+ A R+ M + K PN VT+N L+ FA KL EM + ++PN+ TY L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
I +C + A + M+ + CL P Y ++ +A ++ EL M RG
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 529 FTA 531
Sbjct: 411 LVG 413
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 192/376 (51%), Gaps = 2/376 (0%)
Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
++N + Q LA F+ M E ++ TF L+ + R +A++ F++M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAE 272
P+ + ++ +I LC+ ++ A + + KD PDV+ Y +L+ G C +G S+A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
R+ M I P+V+T++ +IDA + G+++ A + + EM+ +P+ +T++ L+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
SR ++ +++ M GC D +TY+ LI+ +CK K+E +K+ M ++G N
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
T+ ++ + + G +N A ++ +M PN +TYN+L+ + + L + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
M++N ++ ++ TY I+I C G +A+ I + + L P Y ++ L + G
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWD-IYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 513 QLQKHEELVEKMVDRG 528
++ + L KM + G
Sbjct: 481 LRREADALFRKMKEDG 496
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 191/394 (48%), Gaps = 5/394 (1%)
Query: 140 ARPEFVHSPDLYHEMINLAGKVRQFDLAWH-FIDLMKSRNVEITVDTFSILVRRYVRAGL 198
+R + + D Y EM+ + + D + F +++ R + D FS L+ +
Sbjct: 39 SRRAYSNGSD-YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIAD-FSRLLSAISKMKK 96
Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTN 257
++ + +M+ G + +I+++ CR + S A SF + K EP ++ + +
Sbjct: 97 YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGS 156
Query: 258 LVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVG 317
L+ G+CR + +A +F +M G +PNV Y+ +ID LC+ Q+ A D+ M + G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 318 CEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAI 377
P+ +T+N+L+ + R ++ + M + D T+N LID K+G++ +A
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 378 KVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMF 437
+ M+R+ +P+ T++++ + ++ A M+G M C P+ VTY+IL+ +
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 438 ATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPG 497
SK + +KL EM + V N TY ILI YC G N A + R M+ + P
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG-VHPN 395
Query: 498 SSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
Y ++L L G+++K ++ M G A
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 183/395 (46%), Gaps = 15/395 (3%)
Query: 75 PNPSSNSNPSLNPDFTIPSLSLGFS----QISTAHSISPSTVRHVIEKSCGVRHGIPLLQ 130
P+ N LN LSL S I H S T ++ C G +
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC---RGDRVYD 169
Query: 131 VLSFFNWVTA---RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFS 187
L F+ + +P V +Y+ +I+ K +Q D A ++ M+ + V T++
Sbjct: 170 ALYMFDQMVGMGYKPNVV----IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KD 246
L+ +G ++A + M + PD F+ +I ++ R SEA+ F++ + +
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 247 KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
+PD++ Y+ L+ G C + EAE +F M G P+V TYSI+I+ C+ ++
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
+F EM + G N++T+ L++ + +A + +++ +M G + ITYN L+
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
C +GK+E A+ +L M + G + + T+N+I R + K G+V A +Y + P+
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPN 461
TY +M L ++M+E+ + PN
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 198/441 (44%), Gaps = 53/441 (12%)
Query: 142 PEFVHSPDLYHEMINLAG----------------KVRQFDLAWHFIDLMKSRNVEITVDT 185
P+ V + DL EM G K + A +D M + ++V
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIA 347
Query: 186 FSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK 245
+ LV Y + +A+ FNRMEE G APDK+ FS+++ C+ +A F+ +K
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 246 D-KFEPDVIVYTNLVRG----------------------------------WCRAGNISE 270
+ P ++ +++G +C+ G +
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 271 AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 330
A + M+ GI+PNV Y+ ++ A CR + A +F+EMLE G EPN+ T++ L+
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 331 VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVR-KGCN 389
K + V NQM EA+ + YN +I+ CK G+ A ++L ++++ K +
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
+ +++N I K+GD + A Y +M + PN VT+ L+ F S D+ L++
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 450 KKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLR 509
EM+ E++ ++ Y LI +C AY E+ E L P SVY ++ R
Sbjct: 648 THEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL-PELGLMPNVSVYNSLISGFR 706
Query: 510 RAGQLQKHEELVEKMVDRGFT 530
G++ +L +KMV+ G +
Sbjct: 707 NLGKMDAAIDLYKKMVNDGIS 727
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 190/423 (44%), Gaps = 37/423 (8%)
Query: 139 TARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGL 198
+ R F +P ++ ++N + ++ D A LM R V V + ++ VR+ L
Sbjct: 160 SKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNL 219
Query: 199 AAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTN 257
EA +N+M G A D + +++ R+R+ EA F + + EPD ++++
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSL 279
Query: 258 LVRGWCRAGNISEAERVFREMK-MAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV 316
V+ C+ ++ A + REM+ G+ + TY+ VI A + G + A V EM+
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 317 GCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDA 376
G + I +L+ + K + K L ++N+M+ G D + ++ +++ CK+ ++E A
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 377 IK--------------VLNSMVRKGC----NPNAS------TF----------NMIFRCI 402
I+ VL + +GC +P A+ +F N IF
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 403 SKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNV 462
K G V+ A M+ EPN V YN +M K+ D+ + EM E +EPN
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 463 NTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVE 522
TY ILI + NA+ I +M + +Y ++ L + GQ K +E+++
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 523 KMV 525
++
Sbjct: 579 NLI 581
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 167/370 (45%), Gaps = 40/370 (10%)
Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
GKV D A F+ +M+ + +E V ++ ++ + R A F+ M E G P+
Sbjct: 463 GKV---DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 219 IAFSIVISILCRKRRASEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
+SI+I + + A + + FE + ++Y ++ G C+ G S+A+ + +
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 278 M-KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKAS 336
+ K + +Y+ +ID + G A + + EM E G PN +TF +L+ K++
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 337 RTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFN 396
R + L++ ++MK + + D Y LID CK ++ A + + + G PN S +N
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 397 MI---FRCISKL--------------------------------GDVNGAHRMYGKMKDL 421
+ FR + K+ G++N A +Y ++ DL
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 422 KCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNA 481
P+ + + +L+ + K+ +EM++ +V PNV Y +I + G+ N A
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Query: 482 YKYIREMIEE 491
++ EM+E+
Sbjct: 820 FRLHDEMLEK 829
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 131/307 (42%), Gaps = 19/307 (6%)
Query: 219 IAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 278
+ I++S + RAS F S P+V+V NLV R G
Sbjct: 118 VLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMV-NNLVDSSKRFG------------ 164
Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
+ P + Y +++A R ++ A D F M++ P NN++ V+++
Sbjct: 165 --FELTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220
Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
++ ++YN+M +G D +T L+ ++ K E+A+K+ ++ +G P+ F++
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 399 FRCISKLGDVNGAHRMYGKMKD-LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
+ K D+ A + +M+ L + TY ++ F + + +++ EM
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
+ +V L+ YC A M EE+ L P ++ ++++ + +++K
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRM-EEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 518 EELVEKM 524
E +M
Sbjct: 400 IEFYMRM 406
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 183 VDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFD 242
V ++ L+ + G A+ + +M G + D ++ +I L + + A +
Sbjct: 695 VSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYS 754
Query: 243 SLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCG 301
L D PD I++ LV G + G +A ++ EMK + PNV YS VI R G
Sbjct: 755 ELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Query: 302 QITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEK 340
+ A + EMLE G + FN L+ + R EK
Sbjct: 815 NLNEAFRLHDEMLEKGIVHDDTVFNLLV-----SGRVEK 848
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 77/180 (42%)
Query: 349 KRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDV 408
KR G E +N+L++ + ++ +++ A+ MV + P N + + + +
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220
Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
+ A +Y KM + + VT +LM+ + + +K+ + + EP+ + +
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
+ C A +REM + + Y V+ + G +++ ++++MV G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 200/422 (47%), Gaps = 40/422 (9%)
Query: 148 PDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHA 205
PD+ Y+ +I K +F A ++ M + +E T++ L+ Y + G+ A
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 206 FNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFF-DSLKDKFEPDVIVYTNLVRGWCR 264
G PD+ + +I LC + + A + F ++L +P+VI+Y L++G
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 265 AGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSIT 324
G I EA ++ EM G+ P V T++I+++ LC+ G ++ A + M+ G P+ T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 325 FNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV 384
FN L+ + + E L++ + M G + D TYN L++ CK K ED ++ +MV
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 385 RKGCNPNASTFNMIFRCISKL-----------------------------------GDVN 409
KGC PN TFN++ + + GD++
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 410 GAHRMYGKMKD-LKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
GA+ ++ KM++ K +T TYNI++ F + M KL +EM + + P+ TYR++
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
+ +C G+ N YK++ EM+E + P + V+ L ++ + ++ +MV +G
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFI-PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Query: 529 FT 530
Sbjct: 703 LV 704
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 173/362 (47%), Gaps = 2/362 (0%)
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
+ M + V + + TF+ L+R + G E +++ + G P+ +++ I
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 227 ILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
LC++ A L ++ +PDVI Y NL+ G C+ EAE +M G++P
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
+ YTY+ +I C+ G + A + + + G P+ T+ +L+ T + L ++
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
N+ G + + I YN LI G + +A ++ N M KG P TFN++ + K+
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
G V+ A + M P+ T+NIL+ ++T + L++ M +N V+P+V TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 466 RILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMV 525
L+ C + + + + M+E+ C P + ++L+ L R +L + L+E+M
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGC-APNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 526 DR 527
++
Sbjct: 559 NK 560
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 182/403 (45%), Gaps = 3/403 (0%)
Query: 129 LQVLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFD-LAWHFIDLMKSRNVEITVDTFS 187
++ L FN + F H+ Y +I G +F+ + +D+ ++ + +
Sbjct: 21 MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYV 80
Query: 188 ILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK 247
++ Y R G EAV+ F RM+ Y C P +++ ++S+L +A + ++D+
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 248 -FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRA 306
PDV +T ++ +C+ A R+ M G + NV Y V+
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 307 HDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC 366
+++F +ML G TFN L+RV K ++ ++ +++ + G + TYN I
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
C+ G+L+ A++++ ++ +G P+ T+N + + K A GKM + EP+
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
+ TYN L+ + + ++ + N P+ TYR LI C G N A
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 487 EMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 529
E + K +KP +Y +++ L G + + +L +M ++G
Sbjct: 381 EAL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
Query: 146 HSPDLYHEMINLAGKVRQFDL--AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
+ PD++ I + G Q + A +D+M V+ V T++ L+ + + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
+ M E GCAP+ F+I++ LCR R+ EA + +K+K PD + + L+ G+
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 263 CRAGNISEAERVFREMKMA-GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPN 321
C+ G++ A +FR+M+ A + + TY+I+I A +T A +F EM++ P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 322 SITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLN 381
T+ ++ K + +M G T +I+C C + ++ +A +++
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 382 SMVRKGCNPNA 392
MV+KG P A
Sbjct: 697 RMVQKGLVPEA 707
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 179/377 (47%), Gaps = 3/377 (0%)
Query: 155 INLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGC 214
+ + G+ Q+ +A +D + + + V ++ ++ Y R G +A+ F RM+E G
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241
Query: 215 APDKIAFSIVISILCRKRRA-SEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
+P + +++++ + + R+ + D ++ K + D + ++ R G + EA+
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
F E+K G +P TY+ ++ + G T A V EM E C +S+T+N L+ +
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
V+A +++ V M + G + ITY +ID + K GK ++A+K+ SM GC PN
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 421
Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
T+N + + K N +M MK C PN T+N ++ + V ++ +E
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481
Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
M+ EP+ +T+ LI+ Y G +A K EM + Y +L L R G
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG-FNACVTTYNALLNALARKG 540
Query: 513 QLQKHEELVEKMVDRGF 529
+ E ++ M +GF
Sbjct: 541 DWRSGENVISDMKSKGF 557
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 175/393 (44%), Gaps = 35/393 (8%)
Query: 167 AWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVIS 226
A F +KS E T++ L++ + +AG+ EA+ MEE C D + ++ +++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 227 ILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQP 285
R + EA + + K P+ I YT ++ + +AG EA ++F MK AG P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 286 NVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVY 345
N TY+ V+ L + + + +M GC PN T+N ++ + + V +V+
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 346 NQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKL 405
+MK G E D T+N LI + + G DA K+ M R G N +T+N + +++
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 406 GDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTY 465
GD + MK +P +Y++++Q +A + + +++ ++E ++ P+
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 466 RILI----------------TMYCGMGH---------------WNNAY---KYIREMIEE 491
R L+ T++ G+ NN Y + I E I E
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 492 KCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
L P Y ++ R G+ K EE+++ +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 41/420 (9%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ ++ + GK + A + M+ + T++ LV YVRAG + EA M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIS 269
+ G P+ I ++ VI + + EA F S+K+ P+ Y ++ + +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALC-RCGQITRAHDVFAEMLEVGCEPNSITFNNL 328
E ++ +MK G PN T++ ++ ALC G + VF EM G EP+ TFN L
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
+ + + ++Y +M R G A TYN L++ + G V++ M KG
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKD-----------------LKC-------- 423
P ++++++ +C +K G+ G R+ ++K+ KC
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 424 ----------EPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYC 473
+P+ V +N ++ +F + D + + + E+ + P++ TY L+ MY
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 474 GMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTARP 533
G A + I + +E+ LKP Y V++ R G +Q+ ++ +M +RG RP
Sbjct: 678 RRGECWKA-EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI--RP 734
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 185/445 (41%), Gaps = 72/445 (16%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+E++ + A I++M + V T++ ++ Y +AG EA+ F M+
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLK-----------------------DK 247
E GC P+ ++ V+S+L +K R++E +K DK
Sbjct: 414 EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDK 473
Query: 248 F-------------EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVI 294
F EPD + L+ + R G+ +A +++ EM AG V TY+ ++
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
Query: 295 DALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK----- 349
+AL R G +V ++M G +P +++ +++ + K + ++ N++K
Sbjct: 534 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIF 593
Query: 350 ------------------------------RLGCEADTITYNFLIDCHCKDGKLEDAIKV 379
+ G + D + +N ++ ++ + A +
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 380 LNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFAT 439
L S+ G +P+ T+N + + G+ A + ++ + +P+ V+YN +++ F
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 440 SKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSS 499
+++ EM E + P + TY ++ Y MG + I M + C +P
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC-RPNEL 772
Query: 500 VYEMVLQQLRRAGQLQKHEELVEKM 524
++MV+ RAG+ + + V K+
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAG--LAAEAVHAFNR 208
Y+ ++N + + + I MKS+ + T ++S++++ Y + G L E + NR
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE--NR 586
Query: 209 MEEYGCAPDKIAFSIVI--SILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAG 266
++E P + ++ + CR SE ++F K ++PD++++ +++ + R
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSE-RAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 267 NISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFN 326
+AE + ++ G+ P++ TY+ ++D R G+ +A ++ + + +P+ +++N
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 327 NLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK 386
+++ + ++ +++ ++M G TYN + + G + V+ M +
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Query: 387 GCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
C PN TF M+ + G + A K+K
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 146 HSPDL--YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAV 203
+ PD+ ++ M+++ + +D A ++ ++ + + T++ L+ YVR G +A
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 204 HAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGW 262
+E+ PD ++++ VI CR+ EA + ++ P + Y V G+
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 263 CRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 313
G +E E V M +PN T+ +V+D CR G+ + A D +++
Sbjct: 747 TAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 184/363 (50%), Gaps = 2/363 (0%)
Query: 154 MINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYG 213
MIN + + A+ + + E TF+ L++ G +EAV +RM E G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 214 CAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAE 272
C PD + ++ +++ +CR S A ++++ + DV Y+ ++ CR G I A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 273 RVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVH 332
+F+EM+ GI+ +V TY+ ++ LC+ G+ + +M+ PN ITFN L+ V
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 333 VKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNA 392
VK + ++ ++Y +M G + ITYN L+D +C +L +A +L+ MVR C+P+
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
TF + + + V+ +++ + N VTY+IL+Q F S + +L +E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 453 MEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAG 512
M + V P+V TY IL+ C G A + ++ + K + G +Y +++ + + G
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTIIEGMCKGG 487
Query: 513 QLQ 515
+++
Sbjct: 488 KVE 490
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 185/367 (50%), Gaps = 2/367 (0%)
Query: 159 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 218
+ +QF+L F ++ + + T +I++ + R A ++ + G PD
Sbjct: 99 ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158
Query: 219 IAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFRE 277
F+ +I L + + SEA D + ++ +PDV+ Y ++V G CR+G+ S A + R+
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 278 MKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASR 337
M+ ++ +V+TYS +ID+LCR G I A +F EM G + + +T+N+L+R KA +
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 338 TEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNM 397
+ M + IT+N L+D K+GKL++A ++ M+ +G +PN T+N
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 398 IFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENE 457
+ ++ A+ M M KC P+ VT+ L++ + K D +K+ + + +
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 458 VEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKH 517
+ N TY IL+ +C G A + +EM+ L P Y ++L L G+L+K
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKA 457
Query: 518 EELVEKM 524
E+ E +
Sbjct: 458 LEIFEDL 464
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 195/411 (47%), Gaps = 40/411 (9%)
Query: 157 LAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAP 216
L GKV + A +D M + V T++ +V R+G + A+ +MEE
Sbjct: 170 LEGKVSE---AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 217 DKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 275
D +S +I LCR A S F ++ K + V+ Y +LVRG C+AG ++ +
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
++M I PNV T+++++D + G++ A++++ EM+ G PN IT+N LM +
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTF 395
+R + + + M R C D +T+ LI +C +++D +KV ++ ++G NA T+
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 396 NMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEE 455
+++ + + G + A ++ +M P+ +TY IL+ + + L++ +++++
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 456 NE-----------------------------------VEPNVNTYRILITMYCGMGHWNN 480
++ V+PNV TY ++I+ C G +
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 481 AYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFTA 531
A +R+M EE P Y +++ R G L +L+E+M GF+A
Sbjct: 527 ANILLRKM-EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 167/322 (51%), Gaps = 1/322 (0%)
Query: 151 YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 210
Y+ ++ K +++ + M SR + V TF++L+ +V+ G EA + M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 211 EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIS 269
G +P+ I ++ ++ C + R SEA + D + ++K PD++ +T+L++G+C +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLM 329
+ +VFR + G+ N TYSI++ C+ G+I A ++F EM+ G P+ +T+ L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 330 RVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCN 389
+ EK L+++ +++ + + Y +I+ CK GK+EDA + S+ KG
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 390 PNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKL 449
PN T+ ++ + K G ++ A+ + KM++ PN TYN L++ KL
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 450 KKEMEENEVEPNVNTYRILITM 471
+EM+ + ++ +++I M
Sbjct: 566 IEEMKSCGFSADASSIKMVIDM 587
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 143/348 (41%), Gaps = 69/348 (19%)
Query: 250 PDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDV 309
P ++ ++ R + +++++ GI N+YT +I+I+ CRC + A+ V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 310 FAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYN-------- 361
+++++G EP++ TFN L++ + + + + ++M GC+ D +TYN
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 362 ---------------------------FLIDCHCKDGKLEDAIKVLNSMVRKGCNPNAST 394
+ID C+DG ++ AI + M KG + T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEME 454
+N + R + K G N + M + PN +T+N+L+ +F +L KEM
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 455 ENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC--------------------- 493
+ PN+ TY L+ YC + A + M+ KC
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 494 -------------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
L + Y +++Q ++G+++ EEL ++MV G
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 270 EAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEV-GCEPNSITFNNL 328
+A +F+EM + P++ +S A+ R Q D F + LE+ G N T N +
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNIM 129
Query: 329 MRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGC 388
+ + +T V ++ +LG E DT T+N LI +GK+ +A+ +++ MV GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 389 NPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLK 448
P+ T+N I I + GD + A + KM++ + + TY+ ++ D +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 449 LKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQL 508
L KEME ++ +V TY L+ C G WN+ +++M+ + + P + ++L
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVF 308
Query: 509 RRAGQLQKHEELVEKMVDRGFT 530
+ G+LQ+ EL ++M+ RG +
Sbjct: 309 VKEGKLQEANELYKEMITRGIS 330
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 38/198 (19%)
Query: 370 DGKLEDAIKVLNSMVRK-----------------------------------GCNPNAST 394
D K +DAI + M+R G N T
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 395 FNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQ-MFATSKSTDMVLKLKKEM 453
N++ C + A+ + GK+ L EP+T T+N L++ +F K ++ V+ L M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV-LVDRM 184
Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQ 513
EN +P+V TY ++ C G + A +R+M EE+ +K Y ++ L R G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGC 243
Query: 514 LQKHEELVEKMVDRGFTA 531
+ L ++M +G +
Sbjct: 244 IDAAISLFKEMETKGIKS 261
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 192/401 (47%), Gaps = 7/401 (1%)
Query: 131 VLSFFNWVTARPEFVHSPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSI 188
L F+W + ++ D + +I++ GK + A + + ++ + V +++
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRA-SEAQSFFDSLK-D 246
L+ + +G EAV+ F +MEE GC P I +++++++ + ++ S + +K D
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 247 KFEPDVIVYTNLVRGWCRAGNI-SEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITR 305
PD Y L+ C+ G++ EA +VF EMK AG + TY+ ++D + +
Sbjct: 274 GIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 306 AHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
A V EM+ G P+ +T+N+L+ + + ++ +++ NQM G + D TY L+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
+ GK+E A+ + M GC PN TFN + G +++ ++ P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYI 485
+ VT+N L+ +F + V + KEM+ P T+ LI+ Y G + A
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 486 REMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVD 526
R M++ + P S Y VL L R G ++ E+++ +M D
Sbjct: 513 RRMLDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 182/387 (47%), Gaps = 4/387 (1%)
Query: 147 SPD--LYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVH 204
+PD Y+ +I + A + MK+ T++ L+ Y ++ EA+
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 205 AFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWC 263
N M G +P + ++ +IS R EA + + +K +PDV YT L+ G+
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 264 RAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSI 323
RAG + A +F EM+ AG +PN+ T++ I G+ T +F E+ G P+ +
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 324 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 383
T+N L+ V + +V V+ +MKR G + T+N LI + + G E A+ V M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 384 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 443
+ G P+ ST+N + +++ G + ++ +M+D +C+PN +TY L+ +A K
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 444 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEM 503
++ L +E+ +EP + L+ + A + E+ +E+ P +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNS 634
Query: 504 VLQQLRRAGQLQKHEELVEKMVDRGFT 530
++ R + K +++ M +RGFT
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFT 661
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 189/439 (43%), Gaps = 43/439 (9%)
Query: 105 HSISPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFVHSPDLYHEMINLAG--KVR 162
+ SPS V + S R G+ L + + N + + PD++ L+G +
Sbjct: 343 NGFSPSIVTYNSLISAYARDGM-LDEAMELKNQMAEKGT---KPDVFTYTTLLSGFERAG 398
Query: 163 QFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFS 222
+ + A + M++ + + TF+ ++ Y G E + F+ + G +PD + ++
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 223 IVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMA 281
++++ + SE F +K F P+ + L+ + R G+ +A V+R M A
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 282 GIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA------ 335
G+ P++ TY+ V+ AL R G ++ V AEM + C+PN +T+ +L+ +
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 336 -SRTEKVL----------------------------QVYNQMKRLGCEADTITYNFLIDC 366
S E+V + ++++K G D T N ++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 367 HCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPN 426
+ + + A VL+ M +G P+ +T+N + S+ D + + ++ +P+
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 427 TVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIR 486
++YN ++ + + ++ EM + + P+V TY I Y + A +R
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 487 EMIEEKCLKPGSSVYEMVL 505
MI+ C +P + Y ++
Sbjct: 759 YMIKHGC-RPNQNTYNSIV 776
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 140/306 (45%), Gaps = 1/306 (0%)
Query: 184 DTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDS 243
+TF+ L+ Y R G +A+ + RM + G PD ++ V++ L R +++
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 244 LKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQ 302
++D + +P+ + Y +L+ + I + E+ I+P ++ +C
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 303 ITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNF 362
+ A F+E+ E G P+ T N+++ ++ + K V + MK G TYN
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 363 LIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLK 422
L+ H + + ++L ++ KG P+ ++N + + + A R++ +M++
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 423 CEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAY 482
P+ +TYN + +A + + + + M ++ PN NTY ++ YC + + A
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Query: 483 KYIREM 488
++ ++
Sbjct: 790 LFVEDL 795
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 139/317 (43%), Gaps = 36/317 (11%)
Query: 141 RPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAA 200
R FV + ++ +I+ + F+ A M V + T++ ++ R G+
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 201 EAVHAFNRMEEYGCAPDKIA------------------------FSIVIS---------- 226
++ ME+ C P+++ +S VI
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 227 ILCRK-RRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQ 284
++C K EA+ F LK++ F PD+ ++V + R +++A V MK G
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 285 PNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQV 344
P++ TY+ ++ R ++ ++ E+L G +P+ I++N ++ + + +R ++
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 345 YNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISK 404
+++M+ G D ITYN I + D E+AI V+ M++ GC PN +T+N I K
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Query: 405 LGDVNGAHRMYGKMKDL 421
L + A +++L
Sbjct: 782 LNRKDEAKLFVEDLRNL 798
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 393 STFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKE 452
S +I + K G V+ A M+ +++ + +Y L+ FA S + + K+
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 453 MEENEVEPNVNTYRILITMYCGMGH-WNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRA 511
MEE+ +P + TY +++ ++ MG WN + +M + + P + Y ++ +R
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM-KSDGIAPDAYTYNTLITCCKRG 292
Query: 512 GQLQKHEELVEKMVDRGFT 530
Q+ ++ E+M GF+
Sbjct: 293 SLHQEAAQVFEEMKAAGFS 311
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 174 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 233
M++ + V T++ + Y + EA+ M ++GC P++ ++ ++ C+ R
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 234 ASEAQSFFDSLK--DKFEP---DVIVYTNLVRGW 262
EA+ F + L+ D P D+ + +V+ W
Sbjct: 785 KDEAKLFVEDLRNLDPHAPKGEDLRLLERIVKKW 818
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 188/401 (46%), Gaps = 13/401 (3%)
Query: 134 FFNWVTARPEFVHSPDLYHEMINLAG----KVRQFDLAWHFIDLMKSRNVEIT-VDTFSI 188
FF W + + H P Y+EMI++ K +QF + +D MK N + VD
Sbjct: 145 FFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLE 204
Query: 189 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 248
++R+Y L A + P+ AF++++ LC+ E ++ ++ +
Sbjct: 205 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRV 264
Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
+PD + L GWCR + +A ++ EM AG +P +TY ID C+ G + A D
Sbjct: 265 KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAAD 324
Query: 309 VFAEMLEVGCE---PNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLID 365
+F M+ G P + TF ++ K + E+ ++ +M GC D TY +I+
Sbjct: 325 LFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIE 384
Query: 366 CHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEP 425
C K+++A K L+ M KG P+ T+N R + + + A ++YG+M + +C P
Sbjct: 385 GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAP 444
Query: 426 NTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYK-- 483
+ TYN+L+ MF D EM++ + +V TY +I G+ + A +
Sbjct: 445 SVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN---GLFDCHRAKEAC 501
Query: 484 YIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKM 524
++ E + K LK V++ L +L G L+ ++ E M
Sbjct: 502 FLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 35/295 (11%)
Query: 134 FFNWVTAR-PEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRR 192
FF W R P+ + L EMI K F T+ +
Sbjct: 275 FFGWCRVRDPK--KAMKLLEEMIEAGHKPENF--------------------TYCAAIDT 312
Query: 193 YVRAGLAAEAVHAFNRMEEYGCA---PDKIAFSIVISILCRKRRASEAQSFFDSL-KDKF 248
+ +AG+ EA F+ M G A P F+++I L + +A E +
Sbjct: 313 FCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 372
Query: 249 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 308
PDV Y +++ G C A + EA + EM G P++ TY+ + LC + A
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK 432
Query: 309 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITY----NFLI 364
++ M+E C P+ T+N L+ + + + + +M + C D TY N L
Sbjct: 433 LYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF 492
Query: 365 DCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMK 419
DCH + ++A +L +V KG F+ +S++G++ H++ MK
Sbjct: 493 DCH----RAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 206/414 (49%), Gaps = 20/414 (4%)
Query: 108 SPSTVRHVIEKSCGVRHGIPLLQVLSFFNWVTARPEFV------------HSPDLYHEMI 155
SP ++ +++K CG+ L+ + N +P ++ S LY+E++
Sbjct: 92 SPEKIKRILDK-CGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEIL 150
Query: 156 NLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCA 215
++ GK+R+F+ D M R+ + T+ +L+ RY A EAV F R +E+G
Sbjct: 151 DVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGID 210
Query: 216 PDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVF 275
D +AF ++ LCR + A++ F S + +F D+ ++ GWC GN+ EA+R +
Sbjct: 211 DDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 276 REMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKA 335
+++ + +P+V +Y +I+AL + G++ +A +++ M + P+ NN++
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 336 SRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG--CNPNAS 393
R + L+V+ ++ G + + +TYN L+ CK + E +++ M KG C+PN
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDV 390
Query: 394 TFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEM 453
TF+ + + + DV+ + +M KCE + YN++ +++ + V ++ EM
Sbjct: 391 TFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEM 447
Query: 454 EENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 507
E + + P+ TY I I G A Y +EM+ K + P EM+L Q
Sbjct: 448 ERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMM-SKGMVPEPRT-EMLLNQ 499
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 4/245 (1%)
Query: 290 YSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMK 349
Y+ ++D L + + H VF EM + N T+ L+ + A + ++ + V+ + K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 350 RLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRK-GCNPNASTFNMIFRCISKLGDV 408
G + D + ++ L+ C+ +E A + S R+ GC+ A NMI LG+V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKA--MNMILNGWCVLGNV 263
Query: 409 NGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRIL 468
+ A R + + KC P+ V+Y ++ ++L + M + P+V +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 469 ITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRG 528
I C A + RE I EK P Y +L+ L + + +K ELVE+M +G
Sbjct: 324 IDALCFKKRIPEALEVFRE-ISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 529 FTARP 533
+ P
Sbjct: 383 GSCSP 387
>sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protein At1g74750
OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1
Length = 855
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 158/342 (46%), Gaps = 38/342 (11%)
Query: 131 VLSFFNWVTARPEFVHSPDLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILV 190
L FF W+ +P F H Y M+ G+ +QF +D M + T++ L+
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 191 RRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEP 250
Y RA EA++ FN+M+E GC EP
Sbjct: 402 HSYGRANYLKEAMNVFNQMQEAGC----------------------------------EP 427
Query: 251 DVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVF 310
D + Y L+ +AG + A +++ M+ AG+ P+ +TYS++I+ L + G + AH +F
Sbjct: 428 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLF 487
Query: 311 AEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDC--HC 368
EM+ GC PN +TFN ++ +H KA E L++Y M+ G + D +TY+ +++ HC
Sbjct: 488 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 369 KDGKLEDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTV 428
G LE+A V M RK P+ + ++ K G+V+ A + Y M PN
Sbjct: 548 --GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Query: 429 TYNILMQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILIT 470
T N L+ F L + M + P++ TY +L++
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 139/255 (54%), Gaps = 3/255 (1%)
Query: 279 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 338
+ G + + +TY+ ++ L R Q + + EM+ GC+PN++T+N L+ + +A+
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 339 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNPNASTFNMI 398
++ + V+NQM+ GCE D +TY LID H K G L+ A+ + M G +P+ T+++I
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 399 FRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLKKEMEENEV 458
C+ K G + AHR++ +M C PN VT+NI++ + A +++ + LKL ++M+
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 459 EPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRRAGQLQKHE 518
+P+ TY I++ + G A EM + K P VY +++ +AG + K
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 519 ELVEKMVDRGFTARP 533
+ + M+ G RP
Sbjct: 590 QWYQAMLQAGL--RP 602
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,373,573
Number of Sequences: 539616
Number of extensions: 7888652
Number of successful extensions: 30171
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 20651
Number of HSP's gapped (non-prelim): 2733
length of query: 534
length of database: 191,569,459
effective HSP length: 122
effective length of query: 412
effective length of database: 125,736,307
effective search space: 51803358484
effective search space used: 51803358484
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)