Citrus Sinensis ID: 009472
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 534 | ||||||
| 255565453 | 525 | conserved hypothetical protein [Ricinus | 0.979 | 0.996 | 0.788 | 0.0 | |
| 225436460 | 536 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.968 | 0.757 | 0.0 | |
| 224104719 | 523 | predicted protein [Populus trichocarpa] | 0.925 | 0.944 | 0.766 | 0.0 | |
| 449456056 | 518 | PREDICTED: uncharacterized protein LOC10 | 0.970 | 1.0 | 0.738 | 0.0 | |
| 449518557 | 518 | PREDICTED: uncharacterized protein LOC10 | 0.970 | 1.0 | 0.734 | 0.0 | |
| 356542674 | 523 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.998 | 0.715 | 0.0 | |
| 357472103 | 530 | Auxin-regulated protein [Medicago trunca | 0.962 | 0.969 | 0.666 | 0.0 | |
| 356541954 | 532 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.984 | 0.667 | 0.0 | |
| 224118328 | 465 | predicted protein [Populus trichocarpa] | 0.784 | 0.901 | 0.764 | 1e-177 | |
| 356550138 | 417 | PREDICTED: uncharacterized protein LOC10 | 0.777 | 0.995 | 0.735 | 1e-172 |
| >gi|255565453|ref|XP_002523717.1| conserved hypothetical protein [Ricinus communis] gi|223537021|gb|EEF38657.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/529 (78%), Positives = 464/529 (87%), Gaps = 6/529 (1%)
Query: 1 METRMKKYRQ-VSPERAKVWTEKSPKYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSR- 58
ME RMKKYRQ VSPERAKVWTE+SPKY Q RKV VVYY+CRNRQLEHPHFIEVPLSS+
Sbjct: 1 MEARMKKYRQQVSPERAKVWTERSPKYQQKNRKVAVVYYLCRNRQLEHPHFIEVPLSSQQ 60
Query: 59 DGLYLRDVIDRLNVLRGRGMASMYSWSCKRSYKNGFVWHDLCEDDLILPAHGDEYVLKGS 118
DGLYL+DVI+RLNVLRGRGMASMYSWSCKRSYKNGFVWHDL EDDLILPAHG+EYVLKGS
Sbjct: 61 DGLYLKDVIERLNVLRGRGMASMYSWSCKRSYKNGFVWHDLSEDDLILPAHGNEYVLKGS 120
Query: 119 ELFDESNSGRFSPGVTTKIQSLRQLTAPEPASSRSPDDSSSSSSMNEKGTKHSQDDDLSP 178
ELFDESNS RF P T K+Q+L+QL PEPASSR DDSSSSSSMN K TKHSQ+D+LSP
Sbjct: 121 ELFDESNSDRFGPVGTIKMQNLKQL--PEPASSRCRDDSSSSSSMNGKETKHSQEDELSP 178
Query: 179 SVHHPGSSGVSPDSTAGKSSSWGGSLSLTEYKIYKNDGLADASTQTEENVNRAKPRETCT 238
+ PGSSGVSP+S GK+SSW GSLSLTEYK+YK+DGLADASTQTEENV R K RETCT
Sbjct: 179 PLQRPGSSGVSPESRDGKNSSWNGSLSLTEYKVYKSDGLADASTQTEENVRRPKSRETCT 238
Query: 239 RGVSTDDGSIEPEITASCQKQVPCVKENSEISGHQVSVSPPPSSSSASSSGGKTETLESL 298
RGVSTDDGS++ E + Q +VP VKE+SEIS + VS P SSSSASSSGGKTETLESL
Sbjct: 239 RGVSTDDGSLDHECNNNYQNRVPRVKESSEISENSVSPPP--SSSSASSSGGKTETLESL 296
Query: 299 IRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPTYRPRFS 358
IRADV+KINSFRILEEEEIRMP NARLKA+NMLMQLISCGS+SVKDHSFG+IPTYRPRFS
Sbjct: 297 IRADVNKINSFRILEEEEIRMPGNARLKASNMLMQLISCGSISVKDHSFGLIPTYRPRFS 356
Query: 359 HTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDEHNALKR 418
H+KF SPLFSTS+M G+LDCLS+NPRLMGL+LEDKEYFSGSL+ETK+LK+EG HN LKR
Sbjct: 357 HSKFASPLFSTSLMLGELDCLSENPRLMGLRLEDKEYFSGSLVETKMLKQEGGGHNTLKR 416
Query: 419 SSSYNADRISKQLDTVEDKEESNSGQSKCIPRAIKASLGKQGRSEAMRSPVPDKPRNSSD 478
SSSYNADR KQLD+ E+ +ES SG SKCIP AIKAS+ KQ RSE+MRSPV D+PRNSSD
Sbjct: 417 SSSYNADRSCKQLDSAENNDESASGHSKCIPLAIKASISKQPRSESMRSPVSDRPRNSSD 476
Query: 479 RVDSSQTVSGGTSNGSSKRITESVSSKKPSKRLDSFREEEEKVIKIEES 527
VD S+T+ TSNGSS+RIT+ +S KK SK+LDSFREE+EKVIKIEES
Sbjct: 477 GVDGSETIHSSTSNGSSRRITDPLSGKKQSKKLDSFREEKEKVIKIEES 525
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436460|ref|XP_002274821.1| PREDICTED: uncharacterized protein LOC100253409 [Vitis vinifera] gi|147767898|emb|CAN64540.1| hypothetical protein VITISV_009523 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224104719|ref|XP_002313540.1| predicted protein [Populus trichocarpa] gi|222849948|gb|EEE87495.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449456056|ref|XP_004145766.1| PREDICTED: uncharacterized protein LOC101221316 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449518557|ref|XP_004166308.1| PREDICTED: uncharacterized protein LOC101230215 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356542674|ref|XP_003539791.1| PREDICTED: uncharacterized protein LOC100783687 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357472103|ref|XP_003606336.1| Auxin-regulated protein [Medicago truncatula] gi|355507391|gb|AES88533.1| Auxin-regulated protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356541954|ref|XP_003539437.1| PREDICTED: uncharacterized protein LOC100800618 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224118328|ref|XP_002331455.1| predicted protein [Populus trichocarpa] gi|222873533|gb|EEF10664.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356550138|ref|XP_003543446.1| PREDICTED: uncharacterized protein LOC100795715 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 534 | ||||||
| TAIR|locus:2046213 | 540 | AT2G28150 "AT2G28150" [Arabido | 0.934 | 0.924 | 0.566 | 7e-141 | |
| TAIR|locus:2168042 | 423 | AT5G59790 "AT5G59790" [Arabido | 0.220 | 0.278 | 0.680 | 1.3e-68 | |
| TAIR|locus:2075331 | 343 | AT3G46110 [Arabidopsis thalian | 0.204 | 0.317 | 0.654 | 5.6e-56 | |
| TAIR|locus:2184133 | 414 | AT5G10150 "AT5G10150" [Arabido | 0.174 | 0.224 | 0.612 | 1.1e-44 | |
| TAIR|locus:504956226 | 372 | AT1G05577 "AT1G05577" [Arabido | 0.196 | 0.282 | 0.481 | 4.3e-21 |
| TAIR|locus:2046213 AT2G28150 "AT2G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1378 (490.1 bits), Expect = 7.0e-141, P = 7.0e-141
Identities = 298/526 (56%), Positives = 369/526 (70%)
Query: 1 METRMKKY-RQVSPERAKVWTEKSPKYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSRD 59
ME RMKKY R+VSPERAKVWTEKSPKYHQ +KV +VYY+ +NRQLEHPHF+EV +SS +
Sbjct: 1 MEARMKKYSREVSPERAKVWTEKSPKYHQKIKKVQIVYYLSKNRQLEHPHFMEVLISSPN 60
Query: 60 GLYLRDVIDRLNVLRGRGMASMYSWSCKRSYKNGFVWHDLCEDDLILPAHGDEYVLKGSE 119
GLYLRDVI+RLNVLRGRGMASMYSWS KRSY+NGFVWHDL EDDLILPA+G+EYVLKGSE
Sbjct: 61 GLYLRDVIERLNVLRGRGMASMYSWSSKRSYRNGFVWHDLSEDDLILPANGNEYVLKGSE 120
Query: 120 LFDESNSGRFSPGVTTKIQSLRQLTAPEPAXXXXXXXXXXXXXMNEKGT-KHS-QDDDLS 177
LFDESNS FSP V Q+++Q+ P+ N KGT KHS +DD+LS
Sbjct: 121 LFDESNSDHFSPIVNLATQNMKQIVVEPPSSRSMDDSSSSSSMNNGKGTNKHSHEDDELS 180
Query: 178 P-SVHHPGSSGVSPDSTAGKXXXXXXXXXXTEYKIYKNDGLADASTQTEENVN-RAK-PR 234
P ++ SSGVSPDS K EYK+YK++GLADASTQT+E V+ R+K P
Sbjct: 181 PPALRSVSSSGVSPDSRDAKNSSSWCLA---EYKVYKSEGLADASTQTDETVSGRSKTPI 237
Query: 235 ETCTRGVSTD-DGSIEPEITAS-CQKQVPCVKENSEISGHQXXXXXXXXXXXXXXXGGKT 292
ET +RGVSTD D S EPE + + + C + E + GGKT
Sbjct: 238 ETFSRGVSTDEDVSSEPETSENNLVSEASCAGKERESAEISRNSVSPPFSNSASSLGGKT 297
Query: 293 ETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPT 352
+TLESLIRADVSK+NSFRILE+E++RMP RL+A+NMLMQLISCGS+SVKD++FG++PT
Sbjct: 298 DTLESLIRADVSKMNSFRILEQEDVRMPAIPRLRASNMLMQLISCGSISVKDNNFGLVPT 357
Query: 353 YRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDE 412
Y+P+F H+KFPSP FS+S M GDLD LS+ P LMGL++E+KEYFSGSL+ETK+ K++ +
Sbjct: 358 YKPKFGHSKFPSPFFSSSFMMGDLDRLSETPSLMGLRMEEKEYFSGSLVETKLQKKDAAD 417
Query: 413 HNA-LKRSSSYNADRISKQLDTVEDKEESNSGQSKCIPRAIKAS--LGKQGRSEAMRSPV 469
NA LKRSSSYN DR S Q+ E+ + S SK P + KAS LGKQ + V
Sbjct: 418 SNASLKRSSSYNGDRASNQMGVAENGD-SKPDSSKNNPSSRKASSILGKQ------QPLV 470
Query: 470 PDKPRNSSDRVDSSQTVSGGTSNGSSKRITESVSSKKPSKRLDSFR 515
+K R+SS+ + + T + SKRITES+ +KP DSFR
Sbjct: 471 SEKRRDSSEDTTKNIPCTTKTHDACSKRITESL--RKP----DSFR 510
|
|
| TAIR|locus:2168042 AT5G59790 "AT5G59790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075331 AT3G46110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2184133 AT5G10150 "AT5G10150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:504956226 AT1G05577 "AT1G05577" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 534 | |||
| pfam06136 | 308 | pfam06136, DUF966, Domain of unknown function (DUF | 1e-115 |
| >gnl|CDD|218908 pfam06136, DUF966, Domain of unknown function (DUF966) | Back alignment and domain information |
|---|
Score = 342 bits (879), Expect = e-115
Identities = 182/406 (44%), Positives = 222/406 (54%), Gaps = 106/406 (26%)
Query: 33 VPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKRSYKN 92
VPVVYY+ RN QLEHPHFIEV +SSR+GLYLRDVI+RLN LRG+GMA+MYSWSCKRSYKN
Sbjct: 1 VPVVYYLSRNGQLEHPHFIEVHVSSRNGLYLRDVINRLNDLRGKGMAAMYSWSCKRSYKN 60
Query: 93 GFVWHDLCEDDLILPAHGDEYVLKGSELFDESNSGRFSPGVTTKIQSLRQLTAPEPASSR 152
G+VWHDL EDDLI PA G+EYVLKGSE+ D S+S PE ASSR
Sbjct: 61 GYVWHDLSEDDLIYPASGNEYVLKGSEILDSSSSKGD----------------PEEASSR 104
Query: 153 SPDDSSSSSSMNEKGTKHSQDDDLSPSVHHPGSSGVSPDSTAGKSSSWGGSLSLTEYKIY 212
+ S + +N + + SW S L EYK+Y
Sbjct: 105 KLQEESDTPPVNRR-----------------------------ANQSWSSS-DLAEYKVY 134
Query: 213 KNDGLADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPCVKENSEISGH 272
K + ADASTQT++ +R E++E+S
Sbjct: 135 KAEEPADASTQTDDRRSRD-----------------------------SSEAESTELSRE 165
Query: 273 QVSVSPPPSSSSASSSGGKTETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLM 332
++S PPSSSS+ SS ETLESLI+AD SFR LEE+E R++A+++LM
Sbjct: 166 EIS---PPSSSSSPSSSSSPETLESLIKADGRLSLSFRSLEEDESAG----RVRASSVLM 218
Query: 333 QLISCGSVSVKDH--------SFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPR 384
QLISCGSVS KD + R R H+ SP +NPR
Sbjct: 219 QLISCGSVSTKDCGPVNAPDQGLALPEQRRERLGHSALCSP-------------SFENPR 265
Query: 385 LMGLKLEDKEYFSGSLIETKILKEEGDEHNALKRSSSYNADRISKQ 430
L+LE+KEYFSGSLIETK+ E D ALKRSSSYNADR S+Q
Sbjct: 266 FGHLQLEEKEYFSGSLIETKM---EKDAFPALKRSSSYNADRSSRQ 308
|
Family of plant proteins with unknown function. Length = 308 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| PF06136 | 337 | DUF966: Domain of unknown function (DUF966); Inter | 100.0 | |
| PF00778 | 84 | DIX: DIX domain; InterPro: IPR001158 Dishevelled ( | 98.15 | |
| smart00021 | 83 | DAX Domain present in Dishevelled and axin. Domain | 97.55 |
| >PF06136 DUF966: Domain of unknown function (DUF966); InterPro: IPR010369 This is a family of plant proteins confined to monocotyledons and mosses, with unknown function | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-110 Score=842.07 Aligned_cols=326 Identities=60% Similarity=0.953 Sum_probs=277.8
Q ss_pred eeEEEEEecCCcCCCCeeEEecCCCCCCccHHHHHHHHHHhhCCCCccceeeeeeccccCcceEeecCCCCccccCCCCe
Q 009472 33 VPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKRSYKNGFVWHDLCEDDLILPAHGDE 112 (534)
Q Consensus 33 v~VvYyL~r~g~leHPH~ieV~~~s~~gl~LrDV~~rL~~lRG~gM~~~ysWs~KR~YKngfvW~Dl~ddD~I~P~~~~e 112 (534)
|+|||||||||||||||||||+|+++|||||||||+||++|||||||+||||||||+||||||||||+|||||||++|||
T Consensus 1 V~VVYYLsRnGqLEHPHfieV~~~s~~gL~LRDV~~RL~~LRGkGMp~~ySWS~KRsYKnGfVW~DL~ddD~I~P~~g~E 80 (337)
T PF06136_consen 1 VQVVYYLSRNGQLEHPHFIEVPLSSPQGLYLRDVKDRLTALRGKGMPDMYSWSCKRSYKNGFVWHDLSDDDLILPASGNE 80 (337)
T ss_pred CcEEEEEccCCCCCCCeeEEeccCCCCCcCHHHHHHHHHHhhCCCcceeeEEeeeccccCCceeccCcCCCeeecCCCCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeccccccCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 009472 113 YVLKGSELFDESNSGRFSPGVTTKIQSLRQLTAPEPASSRSPDDSSSSSSMNEKGTKHSQDDDLSPSVHHPGSSGVSPDS 192 (534)
Q Consensus 113 YVLKgsel~~~~~~~r~~~v~~~k~q~lk~~~~~~p~s~~S~~~sSss~S~~~~E~~~~~ed~~~p~~~~~gss~~Sp~~ 192 (534)
|||||||||+.+++.+++.+ +++.+++.....+.+... +++ ...+..
T Consensus 81 YVLKGSEl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------------------~~~------------~~~~~~ 127 (337)
T PF06136_consen 81 YVLKGSELFDGSSSSRFQNA---KVSSSKQPSPEEASSRSS------------------SES------------SSSPPV 127 (337)
T ss_pred eEeeccccccCCcccccccc---cccccccccccccCCccc------------------ccc------------cccccc
Confidence 99999999999888666653 223322211111110000 000 001122
Q ss_pred cCCCCCCCCCCCCcccceeecccc---------ccccccchhhccccCCCCccccccccCCCCCChhhhhhhhcccCCCc
Q 009472 193 TAGKSSSWGGSLSLTEYKIYKNDG---------LADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPCV 263 (534)
Q Consensus 193 ~~~k~~s~~sS~~~~EYkvyk~~~---------~~DAsTQTed~~r~~~~~~~c~rgvsT~d~~~~~e~~e~~~~~~~~~ 263 (534)
.++++++| +++++.||+|||++. ++||+|||||.++..... ...
T Consensus 128 ~~~~~~~~-~s~~~~e~~~~k~~~~~~e~s~~~~~dasTqT~d~~~~~~~~--------------------------~~~ 180 (337)
T PF06136_consen 128 NRRRSQSW-SSSDDNEYKVYKAEEPESEESPVFASDASTQTDDSRRRSREE--------------------------ENE 180 (337)
T ss_pred cccCccCc-CccCccccccccccccccccccccccccCCCCcccccccccc--------------------------ccc
Confidence 34567788 777999999999865 899999999988754422 122
Q ss_pred cCCcccccCCcccCCCCCCCCCCCCCCCchhhHHHHhhhcccccccchhhhhhccCccccccchhhHHHHhhhccccccc
Q 009472 264 KENSEISGHQVSVSPPPSSSSASSSGGKTETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVK 343 (534)
Q Consensus 264 ~~~~El~~e~~e~SpP~s~sS~~s~~~~~eTLEsLirAd~~~~~s~r~leee~~~~~~~~RlkassvLMQLIsCGSiSvK 343 (534)
+..+||+++ +++||+++ +.++...+++|||+||+||++.++++++++++++.++.++||||++||||||+||+|++|
T Consensus 181 ~~~~el~~e--e~s~~~~~-~~~s~~~~~~tlesl~~ad~~~~~s~~~~~~~~~~~~~~~r~r~SsvLmQLIsCGsis~~ 257 (337)
T PF06136_consen 181 EEQTELSRE--EISPPSSS-SSSSSSSSPETLESLIKADGRGIRSFRISEEEDSSGPSSGRMRASSVLMQLISCGSISVK 257 (337)
T ss_pred cccCceeec--ccCCCCCc-ccccCCCCccchhhhhcccccccccccccccccccccccCCccHHHHHHHHhcCCCcccc
Confidence 346899999 99988877 778888999999999999999999999999999988999999999999999999999999
Q ss_pred c--CCCCCCcccCCCCCCCCCCCCCCccccccCccccccCCCcccCCccCCcccccccceeeeeccccCCcccccccccc
Q 009472 344 D--HSFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDEHNALKRSSS 421 (534)
Q Consensus 344 ~--~~~glip~ykpR~s~~~~ps~~~stsv~lgeld~~senpr~~g~rlEEKEYFSGSLVEtk~~~e~gd~~~aLKRSSS 421 (534)
+ ++|+++++|++||.+..|++++++++++ |||+|+++++||||||||||||||+.+ .++++++||||||
T Consensus 258 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------e~~~~~~~~~eekeyFSGslvet~~~~-~~~~~~~LkrSss 328 (337)
T PF06136_consen 258 DKHSGFGLIPPYRPRFPKSRFPSPAFSRTEM--------ENPRFGNLQLEEKEYFSGSLVETKKQE-TGDAAPVLKRSSS 328 (337)
T ss_pred cccccccccccCccccccCCCCcccccchhh--------hchhhcCCcccccccccceeeeccccc-CCCCCcccccccc
Confidence 9 5999999999999999999998888765 999999999999999999999999776 6778999999999
Q ss_pred chhhhhccc
Q 009472 422 YNADRISKQ 430 (534)
Q Consensus 422 YNedR~s~~ 430 (534)
|||||++++
T Consensus 329 yn~~r~~~~ 337 (337)
T PF06136_consen 329 YNAERSSRQ 337 (337)
T ss_pred ccchhhcCC
Confidence 999999874
|
|
| >PF00778 DIX: DIX domain; InterPro: IPR001158 Dishevelled (Dsh) protein is an important component of the Wnt signal-transduction pathway | Back alignment and domain information |
|---|
| >smart00021 DAX Domain present in Dishevelled and axin | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 534 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 2e-04
Identities = 52/357 (14%), Positives = 100/357 (28%), Gaps = 94/357 (26%)
Query: 203 SLSLTEYKIYKNDGLADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPC 262
S+ Y ++ D + NV+R +P ++ + +
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL---------------KLRQALLE---- 146
Query: 263 VKENSEISGHQVSVSPPPSSSSASSSG----GKTE-TLESLIRADVSKINSFRI--LEEE 315
++ + G GKT L+ + V F+I L +
Sbjct: 147 LRPAKNVLID----------------GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190
Query: 316 EIRMPTNARLKATNMLMQLISCGSVSVKDHSFGV---IPTYRPRFSHTKFPSPLFSTSIM 372
P L+ L+ I S DHS + I + + S +
Sbjct: 191 NCNSP-ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-LKSKPYENC-- 246
Query: 373 FGDLDCLSD--NPRLMGLKLEDKEYFSGS---LIETKILKEEGDEHNALKRSSSYNADRI 427
L L + N + F+ S L+ T+ + S++
Sbjct: 247 ---LLVLLNVQNAKAW-------NAFNLSCKILLTTR------FKQVTDFLSAATTTHIS 290
Query: 428 SKQLDTVEDKEESNSGQSKCIPRAIKASLGKQGRSEAMR-SP-----VPDKPRNSSDRVD 481
+E S K + + L E + +P + + R+ D
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQ-DL----PREVLTTNPRRLSIIAESIRDGLATWD 345
Query: 482 SSQTVSGGTSNGSSKRITESVSSKKPS------KRLDSFREEEEKVIKIEESLLQEL 532
+ + V + + I S++ +P+ RL F I LL +
Sbjct: 346 NWKHV---NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS----AHIPTILLSLI 395
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| 1wsp_A | 84 | Axin 1 protein; signaling protein; 2.90A {Rattus n | 97.65 | |
| 3pz7_A | 91 | Dixin; DIX domain, oligomerization, signaling prot | 97.36 | |
| 3pz8_A | 106 | Segment polarity protein dishevelled homolog DVL-; | 97.12 |
| >1wsp_A Axin 1 protein; signaling protein; 2.90A {Rattus norvegicus} SCOP: d.15.1.8 PDB: 2d5g_A | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00017 Score=60.94 Aligned_cols=75 Identities=24% Similarity=0.402 Sum_probs=60.3
Q ss_pred eeeEEEEEecCCcCCCCeeEEecCCCCCCccHHHHHHHHHHhhCCCCccceeeeeecc---ccCcceEeecCCCCccccC
Q 009472 32 KVPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKRS---YKNGFVWHDLCEDDLILPA 108 (534)
Q Consensus 32 kv~VvYyL~r~g~leHPH~ieV~~~s~~gl~LrDV~~rL~~lRG~gM~~~ysWs~KR~---YKngfvW~Dl~ddD~I~P~ 108 (534)
-.-|+|||+. -+.|.++-|| ...++|+|+|+-| .-++.|-+-||-- +-.|.||.+|+||+-++|.
T Consensus 4 ~T~V~Y~~~~---e~~Py~~~ip---~~~iTL~dFK~~l------~k~g~yrffFK~~~~d~~~~~V~eEI~dD~~~LP~ 71 (84)
T 1wsp_A 4 SIVVAYYFCG---EPIPYRTLVR---GRAVTLGQFKELL------TKKGSYRYYFKKVSDEFDCGVVFEEVREDEAILPV 71 (84)
T ss_dssp CEEEEEEETT---CSSCEEEEET---TSCCBHHHHHHHC------CSCSCEEEEEEEECTTSTTSEEEEEECCTTCBCCC
T ss_pred ceEEEEEeCC---CCcceEEecC---CCcccHHHHHHhc------CCCCceEEEEeecCccccCCceEEEEcCCCccccc
Confidence 3569999954 6799999876 2689999999998 3335777777765 3458999999999999999
Q ss_pred CCCeeEEecc
Q 009472 109 HGDEYVLKGS 118 (534)
Q Consensus 109 ~~~eYVLKgs 118 (534)
..|-.|.|-.
T Consensus 72 ~eGkIva~v~ 81 (84)
T 1wsp_A 72 FEEKIIGKVE 81 (84)
T ss_dssp BTTBEEEEEE
T ss_pred cCCEEEEEEE
Confidence 9999988753
|
| >3pz7_A Dixin; DIX domain, oligomerization, signaling protein; 2.44A {Homo sapiens} | Back alignment and structure |
|---|
| >3pz8_A Segment polarity protein dishevelled homolog DVL-; DIX domain, oligomerization, signaling protein; 2.87A {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| d1wspa1 | 83 | Axin 1 {Rat (Rattus norvegicus) [TaxId: 10116]} | 98.15 |
| >d1wspa1 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: Ubiquitin-like family: DIX domain domain: Axin 1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.15 E-value=3.2e-06 Score=69.25 Aligned_cols=75 Identities=24% Similarity=0.406 Sum_probs=63.4
Q ss_pred eeEEEEEecCCcCCCCeeEEecCCCCCCccHHHHHHHHHHhhCCCCccceeeeeecc---ccCcceEeecCCCCccccCC
Q 009472 33 VPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKRS---YKNGFVWHDLCEDDLILPAH 109 (534)
Q Consensus 33 v~VvYyL~r~g~leHPH~ieV~~~s~~gl~LrDV~~rL~~lRG~gM~~~ysWs~KR~---YKngfvW~Dl~ddD~I~P~~ 109 (534)
+-|+|||+. -+.|.++-|+ .+.++|+|+|+-| .-++.|-+-+|-- +-+|+||.|++|||-++|+.
T Consensus 4 ~~v~Y~~~~---e~~Py~~~ip---~~~iTL~dFK~~~------~~~G~y~f~FK~~~~d~~~~~V~~ei~dD~~~LP~~ 71 (83)
T d1wspa1 4 IVVAYYFCG---EPIPYRTLVR---GRAVTLGQFKELL------TKKGSYRYYFKKVSDEFDCGVVFEEVREDEAILPVF 71 (83)
T ss_dssp EEEEEEETT---CSSCEEEEET---TSCCBHHHHHHHC------CSCSCEEEEEEEECTTSTTSEEEEEECCTTCBCCCB
T ss_pred eEEEEEeCC---CCCceEEecc---CCcccHHHHHHhc------CCCCcEEEEEEecCcccCCCeEEEEECCCCccCccc
Confidence 569999953 4789888776 3579999999999 5577899999975 67899999999999999999
Q ss_pred CCeeEEeccc
Q 009472 110 GDEYVLKGSE 119 (534)
Q Consensus 110 ~~eYVLKgse 119 (534)
.|-.|-|-.+
T Consensus 72 egkIvakv~~ 81 (83)
T d1wspa1 72 EEKIIGKVEK 81 (83)
T ss_dssp TTBEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9999988654
|