BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009474
(534 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PO7|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His
341 Replaced By Cys
pdb|2PO7|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With His
341 Replaced By Cys
Length = 359
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 191/327 (58%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA FI+ PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDQDLMTLP-----IQNKLAPFIAKRLTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSAH +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+F S+ IETL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDCIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|2QD3|A Chain A, Wild Type Human Ferrochelatase Crystallized With Ammonium
Sulfate
pdb|2QD3|B Chain B, Wild Type Human Ferrochelatase Crystallized With Ammonium
Sulfate
pdb|2QD4|A Chain A, Wild Type Human Ferrochelatase Crystallized With Mncl2
pdb|2QD4|B Chain B, Wild Type Human Ferrochelatase Crystallized With Mncl2
pdb|2QD5|A Chain A, Structure Of Wild Type Human Ferrochelatase In Complex
With A Lead- Porphyrin Compound
pdb|2QD5|B Chain B, Structure Of Wild Type Human Ferrochelatase In Complex
With A Lead- Porphyrin Compound
pdb|3HCN|A Chain A, Hg And Protoporphyrin Bound Human Ferrochelatase
pdb|3HCN|B Chain B, Hg And Protoporphyrin Bound Human Ferrochelatase
pdb|3HCO|A Chain A, Human Ferrochelatase With Cd And Protoporphyrin Ix Bound
pdb|3HCO|B Chain B, Human Ferrochelatase With Cd And Protoporphyrin Ix Bound
pdb|3HCR|A Chain A, Human Ferrochelatase With Deuteroporphyrin And Ni Bound
pdb|3HCR|B Chain B, Human Ferrochelatase With Deuteroporphyrin And Ni Bound
Length = 359
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 193/327 (59%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA FI+ R PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRRTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSAH +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+F S+HIETL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|2HRE|A Chain A, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|B Chain B, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|C Chain C, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|D Chain D, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2QD1|A Chain A, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|B Chain B, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|C Chain C, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|D Chain D, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
Length = 359
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 193/327 (59%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA FI+ R PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRRTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSAH +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+F S+HI+TL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIKTLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|3AQI|A Chain A, H240a Variant Of Human Ferrochelatase
pdb|3AQI|B Chain B, H240a Variant Of Human Ferrochelatase
Length = 359
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 192/327 (58%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA FI+ PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRLTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADAIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSAH +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+F S+HIETL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|1HRK|A Chain A, Crystal Structure Of Human Ferrochelatase
pdb|1HRK|B Chain B, Crystal Structure Of Human Ferrochelatase
pdb|2HRC|A Chain A, 1.7 Angstrom Structure Of Human Ferrochelatase Variant
R115l
pdb|2HRC|B Chain B, 1.7 Angstrom Structure Of Human Ferrochelatase Variant
R115l
Length = 359
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 192/327 (58%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA FI+ PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRLTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSAH +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+F S+HIETL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|2QD2|A Chain A, F110a Variant Of Human Ferrochelatase With Protoheme Bound
pdb|2QD2|B Chain B, F110a Variant Of Human Ferrochelatase With Protoheme Bound
pdb|3HCP|A Chain A, Human Ferrochelatase With Mn And Deuteroporphyrin Bound
pdb|3HCP|B Chain B, Human Ferrochelatase With Mn And Deuteroporphyrin Bound
Length = 359
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 192/327 (58%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA I+ R PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPAIAKRRTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSAH +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+F S+HIETL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|4F4D|A Chain A, F337r Variant Of Human Ferrochelatase
pdb|4F4D|B Chain B, F337r Variant Of Human Ferrochelatase
Length = 359
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 192/327 (58%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA FI+ R PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRRTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSAH +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+ S+HIETL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIARTSDHIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|2PNJ|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With Phe
337 Replaced By Ala
pdb|2PNJ|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With Phe
337 Replaced By Ala
Length = 359
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 191/327 (58%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA FI+ PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRLTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSAH +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+ S+HIETL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAATSDHIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|2PO5|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His
263 Replaced By Cys
pdb|2PO5|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With His
263 Replaced By Cys
Length = 359
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 191/327 (58%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K G+L+LN+GGPETL DV FL LF D D++ LP +Q LA FI+ PK +E
Sbjct: 4 KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRLTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y IGGGSP++ T Q E + K L E P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ + YPQ+S ST+GSSL + + + M+ + I W I A+ I
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
KEL +F + +V+I FSA +P++ V GDPY E+ V +ME LE N Y
Sbjct: 179 KELDHFPLEKRSEVVILFSACSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
L +QS+VGP+ WL P TDE+I L ++G K++L VPI+F S+HIETL E+D+EY + LA
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
+ G+E R +L F LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|1L8X|A Chain A, Crystal Structure Of Ferrochelatase From The Yeast,
Saccharomyces Cerevisiae, With Cobalt(Ii) As The
Substrate Ion
pdb|1L8X|B Chain B, Crystal Structure Of Ferrochelatase From The Yeast,
Saccharomyces Cerevisiae, With Cobalt(Ii) As The
Substrate Ion
pdb|1LBQ|A Chain A, The Crystal Structure Of Saccharomyces Cerevisiae
Ferrochelatase
pdb|1LBQ|B Chain B, The Crystal Structure Of Saccharomyces Cerevisiae
Ferrochelatase
Length = 362
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 186/334 (55%), Gaps = 27/334 (8%)
Query: 123 GVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYA 182
G++L+N+GGP +E+ FL+ LFAD D+I + + QK +A++I+ R PK ++ Y
Sbjct: 9 GIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKY---QKTIAKYIAKFRTPKIEKQYR 65
Query: 183 SIGGGSPLRRITDAQAEELRKSL---WEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITK 239
IGGGSP+R+ ++ QA E+ K L + P K YV RY P T E +Q+ +DG+ K
Sbjct: 66 EIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKK 125
Query: 240 LVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKE 299
V YP FS ST+GSS+ L + + ++ +VI W EG I A + I K+
Sbjct: 126 AVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENITKK 185
Query: 300 LQNFDSP--EQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLA 357
LQ F P ++V++ FSAH +P+ V GD Y AE+ V IM++L K N Y L
Sbjct: 186 LQEFPQPVRDKVVLLFSAHSLPMDVV-NTGDAYPAEVAATVYNIMQKL---KFKNPYRLV 241
Query: 358 YQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDV------EYKE 411
+QS+VGP WL T E LG K V L+ +PI+F S+HIETL EID+ EYK
Sbjct: 242 WQSQVGPKPWLGAQTAEIAEFLGPK-VDGLMFIPIAFTSDHIETLHEIDLGVIGESEYK- 299
Query: 412 LALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
+K+ R +L TFI +AD V L
Sbjct: 300 -------DKFKRCESLNGNQTFIEGMADLVKSHL 326
>pdb|3GOQ|A Chain A, Crystal Structure Of The Tyr13met Variant Of Bacillus
Subtilis Ferrochelatase
Length = 310
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 162/333 (48%), Gaps = 35/333 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+K+G+L++ +G P ED++ + ++ R +KP + + + K+
Sbjct: 4 KKMGLLVMAMGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KD 45
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL +IT+ QA L + L E + K Y+G+++ PF E+A+ ++ +DGI
Sbjct: 46 RYEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEMHKDGI 105
Query: 238 TKLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
T+ V + L P FS S + R E E E L + T + SWY ++T + +
Sbjct: 106 TEAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRV 161
Query: 297 EKELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
++ + D E M+ SAH +P ++E GDPY ++ E LI E + Y
Sbjct: 162 KETYASMPEDERENAMLIVSAHSLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEY 216
Query: 355 TLAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKEL 412
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 217 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 276
Query: 413 ALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 277 TDDIGASYY-RPEMPNAKPEFIDALATVVLKKL 308
>pdb|2AC2|A Chain A, Crystal Structure Of The Tyr13phe Mutant Variant Of
Bacillus Subtilis Ferrochelatase With Zn(2+) Bound At
The Active Site
Length = 309
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 161/333 (48%), Gaps = 35/333 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+K+G+L++ G P ED++ + ++ R +KP + + + K+
Sbjct: 3 KKMGLLVMAFGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KD 44
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL +IT+ QA L + L E + K Y+G+++ PF E+A+ ++ +DGI
Sbjct: 45 RYEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEMHKDGI 104
Query: 238 TKLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
T+ V + L P FS S + R E E E L + T + SWY ++T + +
Sbjct: 105 TEAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRV 160
Query: 297 EKELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
++ + D E M+ SAH +P ++E GDPY ++ E LI E + Y
Sbjct: 161 KETYASMPEDERENAMLIVSAHSLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEY 215
Query: 355 TLAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKEL 412
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 216 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 275
Query: 413 ALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 276 TDDIGASYY-RPEMPNAKPEFIDALATVVLKKL 307
>pdb|1C9E|A Chain A, Structure Of Ferrochelatase With Copper(Ii) N-
Methylmesoporphyrin Complex Bound At The Active Site
Length = 306
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 160/332 (48%), Gaps = 35/332 (10%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
K+G+L++ G P ED++ + ++ R +KP + + + K+
Sbjct: 1 KMGLLVMAYGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KDR 42
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGIT 238
Y +IGG SPL +IT+ QA L + L E + K Y+G+++ PF E+A+ ++ +DGIT
Sbjct: 43 YEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEMHKDGIT 102
Query: 239 KLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ V + L P FS S + R E E E L + T + SWY ++T + ++
Sbjct: 103 EAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRVK 158
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
+ + D E M+ SAH +P ++E GDPY ++ E LI E + Y
Sbjct: 159 ETYASMPEDERENAMLIVSAHSLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEYA 213
Query: 356 LAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELA 413
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 214 VGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVVT 273
Query: 414 LKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 274 DDIGASYY-RPEMPNAKPEFIDALATVVLKKL 304
>pdb|1C1H|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In
Complex With N-Methyl Mesoporphyrin
pdb|1LD3|A Chain A, Crystal Structure Of B. Subilis Ferrochelatase With Zn(2+)
Bound At The Active Site.
pdb|1N0I|A Chain A, Crystal Structure Of Ferrochelatase With Cadmium Bound At
Active Site
pdb|2HK6|A Chain A, Crystal Structure Of B. Subtilis Ferrochelatase With Iron
Bound At The Active Site
pdb|1AK1|A Chain A, Ferrochelatase From Bacillus Subtilis
Length = 310
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 161/333 (48%), Gaps = 35/333 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+K+G+L++ G P ED++ + ++ R +KP + + + K+
Sbjct: 4 KKMGLLVMAYGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KD 45
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL +IT+ QA L + L E + K Y+G+++ PF E+A+ ++ +DGI
Sbjct: 46 RYEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEMHKDGI 105
Query: 238 TKLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
T+ V + L P FS S + R E E E L + T + SWY ++T + +
Sbjct: 106 TEAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRV 161
Query: 297 EKELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
++ + D E M+ SAH +P ++E GDPY ++ E LI E + Y
Sbjct: 162 KETYASMPEDERENAMLIVSAHSLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEY 216
Query: 355 TLAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKEL 412
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 217 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 276
Query: 413 ALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 277 TDDIGASYY-RPEMPNAKPEFIDALATVVLKKL 308
>pdb|1DOZ|A Chain A, Crystal Structure Of Ferrochelatase
pdb|2Q2N|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In
Complex With Deuteroporphyrin Ix 2,4-Disulfonic Acid
Dihydrochloride
pdb|3M4Z|A Chain A, Crystal Structure Of B. Subtilis Ferrochelatase With
Cobalt Bound At The Active Site
Length = 309
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 161/333 (48%), Gaps = 35/333 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+K+G+L++ G P ED++ + ++ R +KP + + + K+
Sbjct: 3 KKMGLLVMAYGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KD 44
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL +IT+ QA L + L E + K Y+G+++ PF E+A+ ++ +DGI
Sbjct: 45 RYEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEMHKDGI 104
Query: 238 TKLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
T+ V + L P FS S + R E E E L + T + SWY ++T + +
Sbjct: 105 TEAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRV 160
Query: 297 EKELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
++ + D E M+ SAH +P ++E GDPY ++ E LI E + Y
Sbjct: 161 KETYASMPEDERENAMLIVSAHSLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEY 215
Query: 355 TLAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKEL 412
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 216 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 275
Query: 413 ALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 276 TDDIGASYY-RPEMPNAKPEFIDALATVVLKKL 307
>pdb|2H1V|A Chain A, Crystal Structure Of The Lys87ala Mutant Variant Of
Bacillus Subtilis Ferrochelatase
Length = 310
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 160/333 (48%), Gaps = 35/333 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+K+G+L++ G P ED++ + ++ R +KP + + + K+
Sbjct: 4 KKMGLLVMAYGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KD 45
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL +IT+ QA L + L E + K Y+G+ + PF E+A+ ++ +DGI
Sbjct: 46 RYEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGI 105
Query: 238 TKLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
T+ V + L P FS S + R E E E L + T + SWY ++T + +
Sbjct: 106 TEAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRV 161
Query: 297 EKELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
++ + D E M+ SAH +P ++E GDPY ++ E LI E + Y
Sbjct: 162 KETYASMPEDERENAMLIVSAHSLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEY 216
Query: 355 TLAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKEL 412
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 217 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 276
Query: 413 ALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 277 TDDIGASYY-RPEMPNAKPEFIDALATVVLKKL 308
>pdb|2H1W|A Chain A, Crystal Structure Of The His183ala Mutant Variant Of
Bacillus Subtilis Ferrochelatase
Length = 310
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 35/333 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+K+G+L++ G P ED++ + ++ R +KP + + + K+
Sbjct: 4 KKMGLLVMAYGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KD 45
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL +IT+ QA L + L E + K Y+G+++ PF E+A+ ++ +DGI
Sbjct: 46 RYEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEMHKDGI 105
Query: 238 TKLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
T+ V + L P FS S + R E E E L + T + SWY ++T + +
Sbjct: 106 TEAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRV 161
Query: 297 EKELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
++ + D E M+ SA +P ++E GDPY ++ E LI E + Y
Sbjct: 162 KETYASMPEDERENAMLIVSAASLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEY 216
Query: 355 TLAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKEL 412
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 217 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 276
Query: 413 ALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 277 TDDIGASYY-RPEMPNAKPEFIDALATVVLKKL 308
>pdb|2Q3J|A Chain A, Crystal Structure Of The His183ala Variant Of Bacillus
Subtilis Ferrochelatase In Complex With N-Methyl
Mesoporphyrin
Length = 309
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 35/333 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+K+G+L++ G P ED++ + ++ R +KP + + + K+
Sbjct: 3 KKMGLLVMAYGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KD 44
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL +IT+ QA L + L E + K Y+G+++ PF E+A+ ++ +DGI
Sbjct: 45 RYEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEMHKDGI 104
Query: 238 TKLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
T+ V + L P FS S + R E E E L + T + SWY ++T + +
Sbjct: 105 TEAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRV 160
Query: 297 EKELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
++ + D E M+ SA +P ++E GDPY ++ E LI E + Y
Sbjct: 161 KETYASMPEDERENAMLIVSAASLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEY 215
Query: 355 TLAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKEL 412
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 216 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 275
Query: 413 ALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 276 TDDIGASYY-RPEMPNAKPEFIDALATVVLKKL 307
>pdb|2AC4|A Chain A, Crystal Structure Of The His183cys Mutant Variant Of
Bacillus Subtilis Ferrochelatase
pdb|2Q2O|A Chain A, Crystal Structure Of H183c Bacillus Subtilis
Ferrochelatase In Complex With Deuteroporphyrin Ix
2,4-Disulfonic Acid Dihydrochloride
Length = 309
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 35/333 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+K+G+L++ G P ED++ + ++ R +KP + + + K+
Sbjct: 3 KKMGLLVMAYGTPYKEEDIERYYTHI-------------RRGRKPEPEMLQDL-----KD 44
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL +IT+ QA L + L E + K Y+G+++ PF E+A+ ++ +DGI
Sbjct: 45 RYEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEMHKDGI 104
Query: 238 TKLVVLPLYPQFS-ISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
T+ V + L P FS S + R E E E L + T + SWY ++T + +
Sbjct: 105 TEAVSIVLAPHFSTFSVQSYNKRAKE----EAEKLGGLTITSVESWYDEPKFVTYWVDRV 160
Query: 297 EKELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
++ + D E M+ SA +P ++E GDPY ++ E LI E + Y
Sbjct: 161 KETYASMPEDERENAMLIVSACSLP-EKIKEFGDPYPDQLHESAKLIAE----GAGVSEY 215
Query: 355 TLAYQSRVG-PVEWLKP-YTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKEL 412
+ +QS P WL P D T QKG ++ + VP+ FV++H+E L + D E K +
Sbjct: 216 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 275
Query: 413 ALKSGIEKWGRVPALGCEATFISDLADAVIESL 445
G + R + FI LA V++ L
Sbjct: 276 TDDIGASYY-RPEMPNAKPEFIDALATVVLKKL 307
>pdb|2C8J|A Chain A, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus
Anthracis, Str. Ames
pdb|2C8J|B Chain B, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus
Anthracis, Str. Ames
Length = 311
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 33/330 (10%)
Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
+KIG+L++ G P ED++ + ++ R +KP + + + E
Sbjct: 3 KKIGLLVMAYGTPYKEEDIERYYTHI-------------RRGRKPSPEMLEDL-----TE 44
Query: 180 GYASIGGGSPLRRITDAQAEELRKSLWE--KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
Y +IGG SPL IT QA++L K L E + +Y+G+++ PF E+A++++ DGI
Sbjct: 45 RYRAIGGISPLATITLEQAKKLEKRLNEVQDEVEYHMYLGLKHIEPFIEDAVKEMHNDGI 104
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
+ L L P +S + S + + E E L N+ I SWY+ +I + ++
Sbjct: 105 QDAIALVLAPHYSTFSVKSYVGRAQ---EEAEKLGNLTIHGIDSWYKEPKFIQYWVDAVK 161
Query: 298 KELQNFDSP--EQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
E+ ++ SAH +P + GDPY ++ E D I E + N Y
Sbjct: 162 SIYSGMSDAEREKAVLIVSAHSLPEKII-AMGDPYPDQLNETADYIARGAE---VAN-YA 216
Query: 356 LAYQSRVG-PVEWLKPYTDETIIKLGQK-GVKSLLAVPISFVSEHIETLEEIDVEYKELA 413
+ +QS P W+ P + +L +K G S + P+ FV+EH+E L + D E K +
Sbjct: 217 VGWQSAGNTPDPWIGPDVQDLTRELNEKYGYTSFVYAPVGFVAEHLEVLYDNDFECKVVT 276
Query: 414 LKSGIEKWGRVPALGCEATFISDLADAVIE 443
+ G K+ R FI L D V++
Sbjct: 277 DEIGA-KYYRPEMPNASDAFIDCLTDVVVK 305
>pdb|1LF6|A Chain A, Crystal Structure Of Bacterial Glucoamylase
pdb|1LF6|B Chain B, Crystal Structure Of Bacterial Glucoamylase
pdb|1LF9|A Chain A, Crystal Structure Of Bacterial Glucoamylase Complexed With
Acarbose
pdb|1LF9|B Chain B, Crystal Structure Of Bacterial Glucoamylase Complexed With
Acarbose
Length = 684
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 147 ADPDII--RLPR--LFRFLQKPLAQFISVVRAPKSKEGYASIGGGSP 189
ADP I+ RL R L+ L KPLA FI + +E + IGG SP
Sbjct: 399 ADPIILSYRLKRYDLYDSLVKPLADFIIKIGPKTGQERWEEIGGYSP 445
>pdb|2YWD|A Chain A, Crystal Structure Of Glutamine Amidotransferase
Length = 191
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 382 KGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLA 438
+GV +LA+ F EH E L+ + +E KE+ K +E + G E+T I LA
Sbjct: 2 RGVVGVLALQGDF-REHKEALKRLGIEAKEVRKKEHLEGLKALIVPGGESTTIGKLA 57
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,454,772
Number of Sequences: 62578
Number of extensions: 582807
Number of successful extensions: 1591
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1494
Number of HSP's gapped (non-prelim): 26
length of query: 534
length of database: 14,973,337
effective HSP length: 103
effective length of query: 431
effective length of database: 8,527,803
effective search space: 3675483093
effective search space used: 3675483093
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)