Your job contains 1 sequence.
>009478
MTGMAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG
LSCLFSSSSEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSVFQGPVSCSG
NGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSCVDYDSSSFRVHN
GDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEA
ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG
AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM
TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC
FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI
VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVLSYERNILLF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009478
(533 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088262 - symbol:RSH2 "RELA/SPOT homolog 2" sp... 1323 1.6e-156 2
TAIR|locus:2014335 - symbol:RSH3 "RELA/SPOT homolog 3" sp... 1521 4.9e-156 1
UNIPROTKB|Q3A9Z8 - symbol:relA "GTP pyrophosphokinase" sp... 568 4.8e-55 1
TIGR_CMR|CHY_2223 - symbol:CHY_2223 "GTP pyrophosphokinas... 568 4.8e-55 1
TIGR_CMR|DET_0005 - symbol:DET_0005 "GTP pyrophosphokinas... 538 7.2e-52 1
TIGR_CMR|GSU_2236 - symbol:GSU_2236 "GTP pyrophosphokinas... 537 9.2e-52 1
TIGR_CMR|SO_0359 - symbol:SO_0359 "guanosine-3,5-bis(diph... 527 1.1e-50 1
UNIPROTKB|P0AG24 - symbol:spoT "guanosine 3'-diphosphate ... 526 1.3e-50 1
TIGR_CMR|CPS_4973 - symbol:CPS_4973 "guanosine-3,5-bis(di... 525 1.7e-50 1
TIGR_CMR|BA_4637 - symbol:BA_4637 "GTP pyrophosphokinase"... 522 3.6e-50 1
TIGR_CMR|CBU_0303 - symbol:CBU_0303 "guanosine-3,5-bis(di... 520 5.8e-50 1
UNIPROTKB|Q9KNM2 - symbol:spoT "Guanosine-3',5'-bis(dipho... 507 1.4e-48 1
TIGR_CMR|VC_2710 - symbol:VC_2710 "guanosine-3',5'-bis(di... 507 1.4e-48 1
TIGR_CMR|SPO_3203 - symbol:SPO_3203 "guanosine-3',5'-bis(... 500 1.2e-47 1
UNIPROTKB|P66014 - symbol:relA "Bifunctional (p)ppGpp syn... 476 7.4e-45 1
TIGR_CMR|CJE_1408 - symbol:CJE_1408 "RelA/SpoT family pro... 442 4.2e-41 1
TAIR|locus:2137869 - symbol:RSH1 "RELA/SPOT homolog 1" sp... 399 4.0e-36 1
TIGR_CMR|SO_3455 - symbol:SO_3455 "GTP pyrophosphokinase"... 395 6.1e-36 1
TIGR_CMR|CBU_1375 - symbol:CBU_1375 "GTP pyrophosphokinas... 385 6.8e-35 1
UNIPROTKB|P0AG20 - symbol:relA "GDP pyrophosphokinase / G... 376 7.4e-34 1
UNIPROTKB|Q4K899 - symbol:relA "GTP diphosphokinase" spec... 370 3.4e-33 1
UNIPROTKB|Q9S3S3 - symbol:relA "PpGpp synthetase I" speci... 357 8.3e-32 1
TIGR_CMR|VC_2451 - symbol:VC_2451 "GTP pyrophosphokinase"... 357 8.3e-32 1
TIGR_CMR|CPS_4115 - symbol:CPS_4115 "GTP pyrophosphokinas... 343 3.2e-29 1
TAIR|locus:2090487 - symbol:CRSH "Ca2+-activated RelA/spo... 222 3.3e-15 1
UNIPROTKB|Q722A6 - symbol:LMOf2365_0828 "HD domain protei... 146 2.1e-09 1
UNIPROTKB|Q8N4P3 - symbol:HDDC3 "Guanosine-3',5'-bis(diph... 142 5.6e-09 1
ZFIN|ZDB-GENE-050417-377 - symbol:hddc3 "HD domain contai... 142 5.6e-09 1
RGD|1311839 - symbol:Hddc3 "HD domain containing 3" speci... 135 3.2e-08 1
UNIPROTKB|H0YNP9 - symbol:HDDC3 "Guanosine-3',5'-bis(diph... 133 5.3e-08 1
UNIPROTKB|E2QTM0 - symbol:HDDC3 "Uncharacterized protein"... 129 5.7e-07 1
UNIPROTKB|F1MR07 - symbol:HDDC3 "Uncharacterized protein"... 127 1.4e-06 1
MGI|MGI:1915945 - symbol:Hddc3 "HD domain containing 3" s... 127 1.4e-06 1
UNIPROTKB|F1RMH8 - symbol:HDDC3 "Uncharacterized protein"... 125 3.5e-06 1
FB|FBgn0039650 - symbol:Mesh1 "Metazoan SpoT homolog-1" s... 121 1.5e-05 1
DICTYBASE|DDB_G0287233 - symbol:spoT "guanosine polyphosp... 116 0.00018 1
>TAIR|locus:2088262 [details] [associations]
symbol:RSH2 "RELA/SPOT homolog 2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009620 "response to fungus"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR003607 InterPro:IPR007685
Pfam:PF04607 SMART:SM00471 SMART:SM00954 GO:GO:0009737
GO:GO:0009507 EMBL:CP002686 GO:GO:0009611 GO:GO:0016301
EMBL:AB019229 eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0008728 GO:GO:0015969 IPI:IPI00520491 RefSeq:NP_188021.1
UniGene:At.25183 ProteinModelPortal:Q9LVJ3 SMR:Q9LVJ3 STRING:Q9LVJ3
PaxDb:Q9LVJ3 PRIDE:Q9LVJ3 EnsemblPlants:AT3G14050.1 GeneID:820619
KEGG:ath:AT3G14050 TAIR:At3g14050 InParanoid:Q9LVJ3 OMA:CKYSSFV
PhylomeDB:Q9LVJ3 ProtClustDB:CLSN2684912 Genevestigator:Q9LVJ3
Uniprot:Q9LVJ3
Length = 709
Score = 1323 (470.8 bits), Expect = 1.6e-156, Sum P(2) = 1.6e-156
Identities = 261/330 (79%), Positives = 289/330 (87%)
Query: 188 GSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQ 247
GS + L+DELTF ME V+ ++ YA++ L AQL+HKIF ++ VIKAFYEAE+AHRGQ
Sbjct: 170 GSDSVLVDELTFPME---VD-TIKPYARDLLRRAQLRHKIFNDESVIKAFYEAEKAHRGQ 225
Query: 248 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 307
MRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FGAGVADLV
Sbjct: 226 MRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDDSFMSYDYILRNFGAGVADLV 285
Query: 308 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 367
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TL AL
Sbjct: 286 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLYALSP 345
Query: 368 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 427
K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L + FDEAM+T
Sbjct: 346 VKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSFDEAMIT 405
Query: 428 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 487
SAIEKLEQALK IS+ VLCGRHKSLYSI+ KMLKKKLT+DEIHDI+GLRLIV+NE DC
Sbjct: 406 SAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLIVDNEGDC 465
Query: 488 YQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
Y+AL VVH LW+EVPGK+KDYIT PKFNGY
Sbjct: 466 YKALGVVHSLWSEVPGKLKDYITHPKFNGY 495
Score = 224 (83.9 bits), Expect = 1.6e-156, Sum P(2) = 1.6e-156
Identities = 79/219 (36%), Positives = 96/219 (43%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNXXXXXXXXXXXXXXXXQKQTIGGLSCLFXX 67
TIALYASPPSSVCS HQI+ DL+ QK +GGLS LF
Sbjct: 6 TIALYASPPSSVCSTPHQISC------DLDLTSRSSSTSSSMASSPQKPIVGGLSSLFSS 59
Query: 68 XXXXXXXXXX-------------------XLKELSSSFGYAYXXXXXXXXXXXXXRD-QS 107
LK+LS S + Y RD QS
Sbjct: 60 ASVKSSSSSSCSYSTGVDEFSSLRYDRSDDLKDLSFSSSFGYSPAKFVNSFR---RDHQS 116
Query: 108 PVSVFQGPVXXXXXXXXXXXXXXPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS 167
P+SV GPV PP+R +R++ N++ +F G+SGLFNGFVR ALGS
Sbjct: 117 PISVLHGPVSCSCS---------PPMRMSRDR---NLD-GSFRLGASGLFNGFVRKALGS 163
Query: 168 CVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNME-DNI 205
CVDY+ GS + L+DELTF ME D I
Sbjct: 164 CVDYE--------------FGSDSVLVDELTFPMEVDTI 188
>TAIR|locus:2014335 [details] [associations]
symbol:RSH3 "RELA/SPOT homolog 3" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IGI]
InterPro:IPR003607 InterPro:IPR006674 InterPro:IPR007685
Pfam:PF01966 Pfam:PF04607 SMART:SM00471 SMART:SM00954 EMBL:CP002684
GO:GO:0009507 GO:GO:0046872 EMBL:AC006577 GO:GO:0008081
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
ProtClustDB:CLSN2684912 EMBL:AK227169 IPI:IPI00547761 PIR:D96582
RefSeq:NP_564652.2 UniGene:At.11116 ProteinModelPortal:Q9SYH1
SMR:Q9SYH1 STRING:Q9SYH1 EnsemblPlants:AT1G54130.1 GeneID:841853
KEGG:ath:AT1G54130 TAIR:At1g54130 HOGENOM:HOG000243166
InParanoid:Q9SYH1 OMA:QRMYERG PhylomeDB:Q9SYH1
Genevestigator:Q9SYH1 Uniprot:Q9SYH1
Length = 715
Score = 1521 (540.5 bits), Expect = 4.9e-156, P = 4.9e-156
Identities = 325/527 (61%), Positives = 375/527 (71%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNXXXXXXXXXXXXXXXXQKQTIGGLSCLFXX 67
TIALYASP S+VCS HQINAH + D DLN TIGGLS LF
Sbjct: 6 TIALYASPASTVCSTAHQINAHISCDLDLNSRSSSASSSTSS------PTIGGLSLLFSG 59
Query: 68 XXXXXXXXXXXL-----KELSS-----------SFGYAYXXXXXXXXXXXXXRDQSPVSV 111
+EL+S S + Y QSPVSV
Sbjct: 60 ASVKSSSSSSSSHPSVGEELASIRHDRSEDRTLSGSFCYSPSKFIGSSYLKRDHQSPVSV 119
Query: 112 FQGPVXXXXXXXXXXXXXXPPIRTAREKADVNVNFHTFFK-GSSGLFNGFVRNALGSCVD 170
GP+ PP+R +R++ N++ + + GSS LFNGFVR A+GSCVD
Sbjct: 120 LHGPISSGNS---------PPMRISRDR---NLDGGSALRVGSSRLFNGFVRKAIGSCVD 167
Query: 171 YDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRE 230
YD+ D+VL + ++L F M+D + YA++ L AQLKHKIF +
Sbjct: 168 YDT--------DSVL-------VDEQLPFTMDDGFEGERRQPYARDLLRRAQLKHKIFED 212
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ VIKAFYEAE+AHRGQMRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+F+
Sbjct: 213 ESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFM 272
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLI 350
SYDYI RTFG+GVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLI
Sbjct: 273 SYDYILRTFGSGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLI 332
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNMMTL ALP KRQRFAKETLEIF PLANRLGIS+WKV+LENLCFKHL+PDQH
Sbjct: 333 KLADRLHNMMTLYALPPVKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPDQH 392
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
E+S L + FDEAM+TSAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTMDE
Sbjct: 393 HEMSDMLEDSFDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDE 452
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
IHDI+GLRLIV+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGY
Sbjct: 453 IHDIHGLRLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGY 499
>UNIPROTKB|Q3A9Z8 [details] [associations]
symbol:relA "GTP pyrophosphokinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008728 "GTP
diphosphokinase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015968 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_361036.1
ProteinModelPortal:Q3A9Z8 SMR:Q3A9Z8 STRING:Q3A9Z8 GeneID:3727840
KEGG:chy:CHY_2223 PATRIC:21277513 OMA:SEKRIDR
BioCyc:CHYD246194:GJCN-2222-MONOMER Uniprot:Q3A9Z8
Length = 716
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 125/291 (42%), Positives = 178/291 (61%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E+ + KA+ A AH GQ RASG+ Y+ H + A +LA + + +AAGLLHD ++D
Sbjct: 20 EELIKKAYNFAAEAHAGQKRASGEDYITHPLAVAFILAGLQMDDETIAAGLLHDVVEDTA 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ + I R FG VA+LV+GV+KLS++ +E + + L MFLAMA D R +
Sbjct: 80 YTIEDIAREFGEEVANLVDGVTKLSRIEFKNKEEQ------QVENLRKMFLAMAKDIRVI 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL K++ A+ETLEIF PLA+RLGI K +LE+L F++L+PD
Sbjct: 134 LIKLADRLHNMRTLKYHNPEKQKEIARETLEIFAPLAHRLGIYRIKWELEDLAFRYLDPD 193
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ K+ + E + I LE+ LK NI + GR K LYSI KM +++
Sbjct: 194 NYYDIVEKIAKTRAKREQYIQQVISILEEKLKSYNIKAKIE-GRPKHLYSIFQKMREQQK 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
E++D+ +R+IVE+ DCY L ++H +W VPG+ KDYI PK N Y
Sbjct: 253 DFSEVYDVMAVRVIVESVRDCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMY 303
>TIGR_CMR|CHY_2223 [details] [associations]
symbol:CHY_2223 "GTP pyrophosphokinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008728 "GTP
diphosphokinase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015968 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_361036.1
ProteinModelPortal:Q3A9Z8 SMR:Q3A9Z8 STRING:Q3A9Z8 GeneID:3727840
KEGG:chy:CHY_2223 PATRIC:21277513 OMA:SEKRIDR
BioCyc:CHYD246194:GJCN-2222-MONOMER Uniprot:Q3A9Z8
Length = 716
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 125/291 (42%), Positives = 178/291 (61%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E+ + KA+ A AH GQ RASG+ Y+ H + A +LA + + +AAGLLHD ++D
Sbjct: 20 EELIKKAYNFAAEAHAGQKRASGEDYITHPLAVAFILAGLQMDDETIAAGLLHDVVEDTA 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ + I R FG VA+LV+GV+KLS++ +E + + L MFLAMA D R +
Sbjct: 80 YTIEDIAREFGEEVANLVDGVTKLSRIEFKNKEEQ------QVENLRKMFLAMAKDIRVI 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL K++ A+ETLEIF PLA+RLGI K +LE+L F++L+PD
Sbjct: 134 LIKLADRLHNMRTLKYHNPEKQKEIARETLEIFAPLAHRLGIYRIKWELEDLAFRYLDPD 193
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ K+ + E + I LE+ LK NI + GR K LYSI KM +++
Sbjct: 194 NYYDIVEKIAKTRAKREQYIQQVISILEEKLKSYNIKAKIE-GRPKHLYSIFQKMREQQK 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
E++D+ +R+IVE+ DCY L ++H +W VPG+ KDYI PK N Y
Sbjct: 253 DFSEVYDVMAVRVIVESVRDCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMY 303
>TIGR_CMR|DET_0005 [details] [associations]
symbol:DET_0005 "GTP pyrophosphokinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.10.20.30 InterPro:IPR012675 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_180760.1
ProteinModelPortal:Q3ZAI9 STRING:Q3ZAI9 GeneID:3229138
KEGG:det:DET0005 PATRIC:21607115 OMA:SGEPFIE ProtClustDB:CLSK836839
BioCyc:DETH243164:GJNF-5-MONOMER Uniprot:Q3ZAI9
Length = 728
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 128/298 (42%), Positives = 184/298 (61%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ +A+ A AH GQMR SG+P++ H + A+ LA + +S +AA LLHD +DA +S
Sbjct: 21 FLEEAYNYAAAAHTGQMRKSGEPFIEHPLNVAITLADLQLDSATLAAALLHDVPEDAHIS 80
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DA 345
+ I + FGA VA LV+GV+KLS+L+ + AR + +A+ L M +AM+ D
Sbjct: 81 LEQIEKKFGADVAKLVDGVTKLSKLALGPGIEDARRPGGNASLRQAENLRKMLVAMSEDL 140
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R V IKLADR HNM TL AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L
Sbjct: 141 RVVFIKLADRFHNMRTLQALSAEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYL 200
Query: 406 NPDQHTELSSKLVECFDEAMVTSAIEKLEQALK---DKNISFLVLCGRHKSLYSIHCKML 462
+P + ++++ LV+ A + IE + L+ +KN + L GR K LYSI+ KM
Sbjct: 201 DPRHYRQVAN-LVDS-KLAQRKNYIEHVSAILQSEFEKNGLKVELSGRPKHLYSIYQKME 258
Query: 463 K---KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K + ++I+D+ LR++V + DCY A+ +VH LW +PG DYI PK NGY
Sbjct: 259 KYASQGKQFEDIYDVLALRVLVNDIPDCYHAIGIVHSLWHPIPGAFDDYIANPKPNGY 316
>TIGR_CMR|GSU_2236 [details] [associations]
symbol:GSU_2236 "GTP pyrophosphokinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 GO:GO:0016787 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.10.20.30 InterPro:IPR012675 InterPro:IPR026020
PANTHER:PTHR21262 KO:K00951 GO:GO:0015969 TIGRFAMs:TIGR00691
HOGENOM:HOG000018299 OMA:RAYFYAE RefSeq:NP_953285.1
ProteinModelPortal:Q74AW3 SMR:Q74AW3 DNASU:2687525 GeneID:2687525
KEGG:gsu:GSU2236 PATRIC:22027327 ProtClustDB:CLSK924587
BioCyc:GSUL243231:GH27-2208-MONOMER Uniprot:Q74AW3
Length = 716
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 115/291 (39%), Positives = 179/291 (61%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLIRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGVLADLKLDVPTVVTGLLHDTIEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FGA VA+LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 TREELEGMFGAEVANLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ ++ETL+I+ PLANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSISRETLDIYAPLANRLGISWIKSELEDLSFRYLEPQI 194
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 466
+ +L+SK+ + E S +E++ Q + K + + GR K LYSI KM + +
Sbjct: 195 YYDLASKVAKKKKER--ESYVEEVRQIIVSKLAEHDLKGDVFGRSKHLYSIWRKMQARNV 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D+ +R++V + +CY+ L ++H W +PG+ KDYI PK N Y
Sbjct: 253 DIDQIYDLVAIRVMVNDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMY 303
>TIGR_CMR|SO_0359 [details] [associations]
symbol:SO_0359 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:211586 "Shewanella oneidensis MR-1"
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
ProtClustDB:PRK11092 RefSeq:NP_715999.1 ProteinModelPortal:Q8EJU8
GeneID:1168236 KEGG:son:SO_0359 PATRIC:23520423 Uniprot:Q8EJU8
Length = 701
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 122/289 (42%), Positives = 170/289 (58%)
Query: 233 VIKAFYEAER-AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
++K Y+ R AH GQMR SG+PY+ H V A +LA + + + A LLHDT++D +++
Sbjct: 22 LLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLDHETLMAALLHDTIEDTYVT 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG VA+LVEGVSKL +L R+ K +A+ M +AM D R +LI
Sbjct: 82 KEDLAERFGESVAELVEGVSKLDKLK--FRDK----KEAQAENFRKMMMAMTQDIRVILI 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ P ++
Sbjct: 136 KLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKTELEDLGFQAYYPMRY 195
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
L K + ++ + L D I V GR K+LYSI+ KM K+L
Sbjct: 196 RVLKEVVKAARGNRKELIQGIEAAVLTRLNDAGIKGKVK-GREKNLYSIYNKMQSKELQF 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
E+ DIY R+IV++ + CY+ L +H L+ PG+ KDYI PK NGY
Sbjct: 255 QEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGY 303
>UNIPROTKB|P0AG24 [details] [associations]
symbol:spoT "guanosine 3'-diphosphate 5'-triphosphate
3'-diphosphatase [multifunctional]" species:83333 "Escherichia coli
K-12" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA] [GO:0015970
"guanosine tetraphosphate biosynthetic process" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0015969 "guanosine tetraphosphate metabolic
process" evidence=IEA;IMP] [GO:0008728 "GTP diphosphokinase
activity" evidence=IEA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA;IDA] [GO:0042594 "response to starvation"
evidence=IMP] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR006674 InterPro:IPR007685 Pfam:PF01966 Pfam:PF04607
SMART:SM00471 SMART:SM00954 UniPathway:UPA00908 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0016301 EMBL:L10328
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015949 GO:GO:0008081
GO:GO:0015970 eggNOG:COG0317 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728
TIGRFAMs:TIGR00691 EMBL:M24503 PIR:B30374 RefSeq:NP_418107.1
RefSeq:YP_491784.1 ProteinModelPortal:P0AG24 SMR:P0AG24
DIP:DIP-29378N IntAct:P0AG24 MINT:MINT-1219858 PRIDE:P0AG24
EnsemblBacteria:EBESCT00000003824 EnsemblBacteria:EBESCT00000015853
GeneID:12930367 GeneID:948159 KEGG:ecj:Y75_p3524 KEGG:eco:b3650
PATRIC:32122787 EchoBASE:EB0959 EcoGene:EG10966
HOGENOM:HOG000018299 OMA:RAYFYAE ProtClustDB:PRK11092
BioCyc:EcoCyc:SPOT-MONOMER BioCyc:ECOL316407:JW3625-MONOMER
BioCyc:MetaCyc:SPOT-MONOMER Genevestigator:P0AG24 Uniprot:P0AG24
Length = 702
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/286 (41%), Positives = 170/286 (59%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA+LVEGVSKL +L R+ K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKLK--FRDK----KEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV + + CY+ L +H L+ PG++KDYI PK NGY
Sbjct: 258 MDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGY 303
>TIGR_CMR|CPS_4973 [details] [associations]
symbol:CPS_4973 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:167879 "Colwellia psychrerythraea
34H" [GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.10.20.30
InterPro:IPR012675 eggNOG:COG0317 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
RefSeq:YP_271612.1 ProteinModelPortal:Q47UB1 STRING:Q47UB1
DNASU:3519239 GeneID:3519239 KEGG:cps:CPS_4973 PATRIC:21472739
ProtClustDB:CLSK742426 BioCyc:CPSY167879:GI48-4974-MONOMER
Uniprot:Q47UB1
Length = 703
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 124/291 (42%), Positives = 176/291 (60%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + A+ A AH GQMR+SGDPY+ H V A+ LA + + + A LLHD ++D +
Sbjct: 21 DLLKHAYVVARDAHDGQMRSSGDPYITHPVAVAINLAQMNLDHETLMAALLHDVIEDTEV 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA+LVEGVSKL +L + NN + ++A+ M LAM D R +L
Sbjct: 81 TKDELAELFGHTVAELVEGVSKLDKL----KFNN--KEEMQAENFRKMVLAMVQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL +L KR+R A+ETLEI+ P+ANRLGI K +LE L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGSLRPDKRRRIARETLEIYAPIANRLGIHDIKNELELLGFEALYPMR 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
L S + +A++ + +++ L + I ++ GR K LYSI+ KML K+L
Sbjct: 195 SRALKSAVQSARGNRKAIIDNIEKEIAARLAESGIDAQII-GREKHLYSIYRKMLNKELM 253
Query: 468 MDEIHDIYGLRLIVENEED-CYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+IV ++ D CY+AL +H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRVIVHDKIDNCYRALGAMHNLFKPIETRFKDYIAIPKTNGY 304
>TIGR_CMR|BA_4637 [details] [associations]
symbol:BA_4637 "GTP pyrophosphokinase" species:198094
"Bacillus anthracis str. Ames" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 InterPro:IPR026020
PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951 GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:NP_846854.1
ProteinModelPortal:Q81LI2 SMR:Q81LI2 DNASU:1085523
EnsemblBacteria:EBBACT00000012515 GeneID:1085523 KEGG:ban:BA_4637
PATRIC:18786856 ProtClustDB:CLSK887674 Uniprot:Q81LI2
Length = 727
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 119/295 (40%), Positives = 174/295 (58%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTELSSKLV-------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + + + E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>TIGR_CMR|CBU_0303 [details] [associations]
symbol:CBU_0303 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:227377 "Coxiella burnetii RSA 493"
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
RefSeq:NP_819346.1 ProteinModelPortal:Q820X2 GeneID:1208185
KEGG:cbu:CBU_0303 PATRIC:17929301 ProtClustDB:CLSK913970
BioCyc:CBUR227377:GJ7S-310-MONOMER Uniprot:Q820X2
Length = 707
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 118/286 (41%), Positives = 167/286 (58%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AHR Q R +G+PY+ H V A +LA + + + A LLHD ++D +
Sbjct: 24 QAYLMAFSAHRAQKRRTGEPYINHPVAVAGILADLKMDYQTIMAALLHDVIEDTPVEKKA 83
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I FG VA+LV+GVSKL+Q+ ++R +A+ M LAMA D R +++KLA
Sbjct: 84 IAEKFGEEVAELVDGVSKLTQIEFVSRAE------AQAESFRKMVLAMARDIRVIIVKLA 137
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL +L KR+R A+ETL+IF P+ RLG+ V+LE L F L P +H L
Sbjct: 138 DRLHNMRTLGSLHSQKRRRIARETLDIFAPIGKRLGMRELSVELEELGFAALYPLRHRAL 197
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + IEK L L +S + GR K LYSI+ KM K + +EI
Sbjct: 198 KDAVRRTRGNRKKILALIEKTLHVGLNQSRLSSYTITGREKHLYSIYRKMRNKHIPFNEI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+Y R+IVE+ + CY+AL ++H L+ VP + KDYI PK NGY
Sbjct: 258 MDVYAFRVIVEDVDSCYRALGIIHGLFKPVPERFKDYIAIPKANGY 303
>UNIPROTKB|Q9KNM2 [details] [associations]
symbol:spoT "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase" species:243277 "Vibrio cholerae O1 biovar
El Tor str. N16961" [GO:0009267 "cellular response to starvation"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
UniPathway:UPA00908 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0009267 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0015970 HSSP:Q54089 eggNOG:COG0317
KO:K01139 GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262
TIGRFAMs:TIGR00691 OMA:RAYFYAE ProtClustDB:PRK11092 PIR:B82044
RefSeq:NP_232337.1 ProteinModelPortal:Q9KNM2 DNASU:2615538
GeneID:2615538 KEGG:vch:VC2710 PATRIC:20084438 Uniprot:Q9KNM2
Length = 705
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 122/312 (39%), Positives = 181/312 (58%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
+L+ A+E+L Q++ R+ +V+ A AH GQ R+SG+PY++H V A +LA
Sbjct: 6 SLKDVAQEYLTEPQIE--ALRQSYVV-----ARDAHEGQTRSSGEPYIIHPVAVARILAE 58
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
+ + + A LLHD ++D ++ + + FG+ VA+LV+GVSKL +L R K
Sbjct: 59 MRLDLETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVDGVSKLDKLKFRDR------K 112
Query: 329 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ M LAM D R +LIKLADR NM TL AL K++R A+ETLEI+ PLA+R
Sbjct: 113 EAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLAHR 172
Query: 388 LGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFL 445
LGI K +LE L F+ L P+++ L K + M+ ++E L++ +
Sbjct: 173 LGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEIEGRLQEVGLPAR 232
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
V+ GR K+L+SI+ KM K+ I DIY R++V+ + CY+ L VH L+ P +M
Sbjct: 233 VV-GREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVVDTADTCYRVLGQVHSLYKPRPARM 291
Query: 506 KDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 292 KDYIAVPKANGY 303
>TIGR_CMR|VC_2710 [details] [associations]
symbol:VC_2710 "guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase" species:686 "Vibrio cholerae O1 biovar El
Tor" [GO:0009267 "cellular response to starvation" evidence=ISS]
InterPro:IPR003607 InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00471 SMART:SM00954 UniPathway:UPA00908
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009267
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015970 HSSP:Q54089
eggNOG:COG0317 KO:K01139 GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 TIGRFAMs:TIGR00691 OMA:RAYFYAE
ProtClustDB:PRK11092 PIR:B82044 RefSeq:NP_232337.1
ProteinModelPortal:Q9KNM2 DNASU:2615538 GeneID:2615538
KEGG:vch:VC2710 PATRIC:20084438 Uniprot:Q9KNM2
Length = 705
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 122/312 (39%), Positives = 181/312 (58%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
+L+ A+E+L Q++ R+ +V+ A AH GQ R+SG+PY++H V A +LA
Sbjct: 6 SLKDVAQEYLTEPQIE--ALRQSYVV-----ARDAHEGQTRSSGEPYIIHPVAVARILAE 58
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
+ + + A LLHD ++D ++ + + FG+ VA+LV+GVSKL +L R K
Sbjct: 59 MRLDLETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVDGVSKLDKLKFRDR------K 112
Query: 329 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ M LAM D R +LIKLADR NM TL AL K++R A+ETLEI+ PLA+R
Sbjct: 113 EAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLAHR 172
Query: 388 LGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFL 445
LGI K +LE L F+ L P+++ L K + M+ ++E L++ +
Sbjct: 173 LGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEIEGRLQEVGLPAR 232
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
V+ GR K+L+SI+ KM K+ I DIY R++V+ + CY+ L VH L+ P +M
Sbjct: 233 VV-GREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVVDTADTCYRVLGQVHSLYKPRPARM 291
Query: 506 KDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 292 KDYIAVPKANGY 303
>TIGR_CMR|SPO_3203 [details] [associations]
symbol:SPO_3203 "guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase, putative" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0008893 "guanosine-3',5'-bis(diphosphate)
3'-diphosphatase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016787
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 InterPro:IPR026020
PANTHER:PTHR21262 GO:GO:0015969 TIGRFAMs:TIGR00691
HOGENOM:HOG000018299 OMA:RAYFYAE RefSeq:YP_168406.1
ProteinModelPortal:Q5LNK1 GeneID:3193258 KEGG:sil:SPO3203
PATRIC:23379853 ProtClustDB:CLSK934090 Uniprot:Q5LNK1
Length = 730
Score = 500 (181.1 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 110/288 (38%), Positives = 162/288 (56%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+ +A+ ++ H GQ R SG+PY H V A +L + + LLHDT++D SY
Sbjct: 43 ITRAYEFGQQMHDGQFRHSGEPYFTHPVAVAAILTEQRLDDATIITALLHDTIEDTKASY 102
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA LV+GV+KL+ L +RE T +A+ +F+AM+ D R +L+K
Sbjct: 103 GQVSELFGEEVAMLVDGVTKLTNLQLSSRE------TKQAENFRKLFMAMSKDLRVILVK 156
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM T+ A+ K+ A+ET++I+ PLA R+G+ + +LE+L F+ LNP+
Sbjct: 157 LADRLHNMRTIKAMRPEKQAVKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNPEGRQ 216
Query: 412 ELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+ + + E ++ + L I V GR K YSI KM +K
Sbjct: 217 SIIRRFITLQRETGDVIHRITGDMRHELDKAGIEAEVF-GRAKKPYSIWRKMQEKDQGFS 275
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ DIYG R+I +EEDCY+ L +HQ W VPG+ KDYI++PK NGY
Sbjct: 276 RLSDIYGFRIITLSEEDCYRTLGAIHQRWRAVPGRFKDYISQPKSNGY 323
>UNIPROTKB|P66014 [details] [associations]
symbol:relA "Bifunctional (p)ppGpp synthase/hydrolase relA"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IDA]
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0015968 "stringent response" evidence=IMP] [GO:0030145
"manganese ion binding" evidence=IDA] InterPro:IPR003607
InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607 SMART:SM00471
SMART:SM00954 UniPathway:UPA00908 GO:GO:0005525 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 GO:GO:0009405 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
GO:GO:0016301 GO:GO:0030145 Gene3D:3.10.20.30 InterPro:IPR012675
GO:GO:0015968 GO:GO:0015970 eggNOG:COG0317 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 KO:K00951 GO:GO:0008728
TIGRFAMs:TIGR00691 PIR:F70725 RefSeq:NP_217099.1 RefSeq:NP_337159.1
RefSeq:YP_006516024.1 ProteinModelPortal:P66014 SMR:P66014
DNASU:925657 EnsemblBacteria:EBMYCT00000003206
EnsemblBacteria:EBMYCT00000071175 GeneID:13319303 GeneID:887888
GeneID:925657 KEGG:mtc:MT2660 KEGG:mtu:Rv2583c KEGG:mtv:RVBD_2583c
PATRIC:18127594 TubercuList:Rv2583c HOGENOM:HOG000018301
ProtClustDB:CLSK791939 Uniprot:P66014
Length = 738
Score = 476 (172.6 bits), Expect = 7.4e-45, P = 7.4e-45
Identities = 108/290 (37%), Positives = 169/290 (58%)
Query: 233 VIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+++ YE A++ H Q+R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 30 ILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYT 89
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG V LV+GV+KL ++ E + + M AMA D R ++I
Sbjct: 90 LEALTEEFGEEVGHLVDGVTKLDRV--------VLGSAAEGETIRKMITAMARDPRVLVI 141
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
K+ADRLHNM T+ LP K+ R A+ETLE+ PLA+RLG+++ K +LE+L F L+P ++
Sbjct: 142 KVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILHPKKY 201
Query: 411 TELSSKLVEC---FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
E+ +LV + + ++ L I V GR K +SI+ KM+ K
Sbjct: 202 EEIV-RLVAGRAPSRDTYLAKVRAEIVNTLTASKIKATVE-GRPKHYWSIYQKMIVKGRD 259
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ Y
Sbjct: 260 FDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVY 309
>TIGR_CMR|CJE_1408 [details] [associations]
symbol:CJE_1408 "RelA/SpoT family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0015968 "stringent response" evidence=ISS]
InterPro:IPR002912 InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF01842 Pfam:PF04607 SMART:SM00471
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0003824 GO:GO:0016597 EMBL:CP000025
GenomeReviews:CP000025_GR Gene3D:3.10.20.30 InterPro:IPR012675
eggNOG:COG0317 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0015969 TIGRFAMs:TIGR00691 HOGENOM:HOG000018299
RefSeq:YP_179394.1 ProteinModelPortal:Q5HTJ1 STRING:Q5HTJ1
GeneID:3231914 KEGG:cjr:CJE1408 PATRIC:20044618 OMA:TIHTTIF
ProtClustDB:CLSK872444 BioCyc:CJEJ195099:GJC0-1435-MONOMER
Uniprot:Q5HTJ1
Length = 731
Score = 442 (160.7 bits), Expect = 4.2e-41, P = 4.2e-41
Identities = 109/313 (34%), Positives = 173/313 (55%)
Query: 215 KEFLANAQLKHKIFREDFVI-KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
K+ A L +I D ++ KA H GQ R SG+PY +H + A L+ + N
Sbjct: 21 KDLEAAKALLFEICGHDAILEKAVDYCIFCHEGQFRKSGEPYAVHPILVATLVGFLSENK 80
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSK--LARENNTASKTVE 331
+ + A LLHD ++D + + + FG+ V LV G++K+ ++ + L + S T
Sbjct: 81 SNILAALLHDVIEDTNCTKEELREQFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKS 140
Query: 332 ADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGI 390
A M LA + D +++KL DRLHNM+TLD L K++R ++ETL ++ P+A+RLGI
Sbjct: 141 ALTFRNMLLASIEDVGVLIVKLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGI 200
Query: 391 STWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM---VTSAIEKLEQALKDKNI---SF 444
S+ K LE+L FK+L PD++ +L + ++ M + I K+E SF
Sbjct: 201 SSIKNYLEDLSFKYLMPDEY-KLIDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSF 259
Query: 445 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 504
+ R K YSI+ KM +K + ++E+ D+ G+R++VE DCY AL ++H + + +
Sbjct: 260 EIQ-KRIKHSYSIYLKMQRKGIGIEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSR 318
Query: 505 MKDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 319 FKDYIALPKQNGY 331
>TAIR|locus:2137869 [details] [associations]
symbol:RSH1 "RELA/SPOT homolog 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA] [GO:0015969
"guanosine tetraphosphate metabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009611 "response to wounding"
evidence=IEP] InterPro:IPR003607 InterPro:IPR007685 Pfam:PF04607
SMART:SM00471 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0009507 EMBL:CP002687
GO:GO:0003824 GO:GO:0009611 Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969 IPI:IPI00527107
RefSeq:NP_849287.2 UniGene:At.3876 UniGene:At.73164
ProteinModelPortal:F4JHA2 SMR:F4JHA2 PRIDE:F4JHA2
EnsemblPlants:AT4G02260.1 GeneID:828096 KEGG:ath:AT4G02260
OMA:RQMFLAM Uniprot:F4JHA2
Length = 884
Score = 399 (145.5 bits), Expect = 4.0e-36, P = 4.0e-36
Identities = 97/263 (36%), Positives = 153/263 (58%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-F 289
+FV K A AH GQ R SG+P+++H V A +L + + + AGLLHDT++D F
Sbjct: 148 EFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNF 207
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKL-ARENNTASKTVEADRLHTMFLAMAD-ARA 347
++++ I FGA V +VEG +K+S+L KL + + + V+AD L MFLAM D R
Sbjct: 208 ITFEKIEEEFGATVRHIVEGETKVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRV 267
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+++KLADRLHNM TL +P K+ A ETL++F PLA LG+ + K +LENL F +++
Sbjct: 268 IIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELENLSFMYVSA 327
Query: 408 DQHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRH-----KSLYSIHCK 460
+ + ++S++ + E +T A L + ++D LV K YSI+
Sbjct: 328 EDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYSIYKA 387
Query: 461 MLKKKLTMDEIHDI-YGLRLIVE 482
LK K ++++ + I LR++V+
Sbjct: 388 ALKSKGSINDYNQIAQQLRIVVK 410
>TIGR_CMR|SO_3455 [details] [associations]
symbol:SO_3455 "GTP pyrophosphokinase" species:211586
"Shewanella oneidensis MR-1" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.10.20.30
InterPro:IPR012675 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:NP_719004.1
ProteinModelPortal:Q8EBQ4 GeneID:1171131 KEGG:son:SO_3455
PATRIC:23526606 ProtClustDB:CLSK907176 Uniprot:Q8EBQ4
Length = 735
Score = 395 (144.1 bits), Expect = 6.1e-36, P = 6.1e-36
Identities = 95/265 (35%), Positives = 145/265 (54%)
Query: 256 LLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQ 315
L H E +LA + + + A +L D L+ + I FG +A LV V ++
Sbjct: 55 LEHAREMIEILAPLNMDIETLQAAILFVVFDAGLLNEEAIKEKFGEPLARLVASVVTMNA 114
Query: 316 LSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFA 374
+ L N+ S + D + M LAM D RAV+IKLA+R+ + + R A
Sbjct: 115 IGALKINPNSRSTEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLRAVKNADEETRVLLA 174
Query: 375 KETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV-ECFD-EAMVTSAIEK 432
+E +I+ PLANRLGI K +LE++ F++L+PD + E++ +L + D E + + +E+
Sbjct: 175 REIADIYAPLANRLGIGQLKWELEDISFRYLHPDTYKEIAKQLDGKRLDREVFIENFVEQ 234
Query: 433 LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALR 492
L+Q L + +I V GR K +YSI KM K L DE+ D+ +R++ E +DCY AL
Sbjct: 235 LQQRLDEDHIRAKVY-GRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALG 293
Query: 493 VVHQLWAEVPGKMKDYITRPKFNGY 517
VVH LW +P + DY+ PK NGY
Sbjct: 294 VVHTLWHHIPREFDDYVANPKPNGY 318
>TIGR_CMR|CBU_1375 [details] [associations]
symbol:CBU_1375 "GTP pyrophosphokinase" species:227377
"Coxiella burnetii RSA 493" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
OMA:HRADCDQ GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691
RefSeq:NP_820364.1 ProteinModelPortal:Q83BW2 PRIDE:Q83BW2
GeneID:1209281 KEGG:cbu:CBU_1375 PATRIC:17931493
ProtClustDB:CLSK914739 BioCyc:CBUR227377:GJ7S-1363-MONOMER
Uniprot:Q83BW2
Length = 714
Score = 385 (140.6 bits), Expect = 6.8e-35, P = 6.8e-35
Identities = 87/259 (33%), Positives = 146/259 (56%)
Query: 263 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSK-LAR 321
A LL + +S +AA LL+ T+ + +S + + G VA L+ G ++ + L R
Sbjct: 51 ASLLQPLHCDSETLAAALLYPTVTQSGISQEALTDQIGKSVAKLLMGTKRMETIDDMLIR 110
Query: 322 ENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 380
+ + + D L M LAM D R VLIKL++RL + P+ +++ A++ +++
Sbjct: 111 SSGFSQQQNFVDNLRKMLLAMVDDVRIVLIKLSERLTTLRYSRHQPISEQKDIAQKIMDL 170
Query: 381 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EAMVTSAIEKLEQALK 438
+ PLANRLG+ +K Q+E+ F++LNP++++ +S L + + E + IE LE
Sbjct: 171 YAPLANRLGVGQFKWQMEDWAFRYLNPNEYSLISKSLNMRRVEREKYIEKLIEYLEGIFH 230
Query: 439 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 498
+I + GR K +YSI K+ +K++ EI+D +R++V + EDCY AL +VH LW
Sbjct: 231 GSDIEKYNISGRAKHIYSIFRKIQRKQVDFSEIYDTSAVRILVSSLEDCYTALSIVHALW 290
Query: 499 AEVPGKMKDYITRPKFNGY 517
+ + DYI +PK NGY
Sbjct: 291 EPIAKEFDDYIAKPKDNGY 309
>UNIPROTKB|P0AG20 [details] [associations]
symbol:relA "GDP pyrophosphokinase / GTP pyrophosphokinase"
species:83333 "Escherichia coli K-12" [GO:0016597 "amino acid
binding" evidence=IEA] [GO:0015970 "guanosine tetraphosphate
biosynthetic process" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA;IMP] [GO:0008728 "GTP diphosphokinase activity"
evidence=IEA;IDA] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IPI] InterPro:IPR002912 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF01842 Pfam:PF04607 SMART:SM00954
UniPathway:UPA00908 GO:GO:0005525 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016597 GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015949 EMBL:U29580
GO:GO:0015970 EMBL:J04039 eggNOG:COG0317 InterPro:IPR026020
PANTHER:PTHR21262 PIR:D65060 RefSeq:NP_417264.1 RefSeq:YP_490992.1
ProteinModelPortal:P0AG20 SMR:P0AG20 IntAct:P0AG20 PRIDE:P0AG20
EnsemblBacteria:EBESCT00000002092 EnsemblBacteria:EBESCT00000002093
EnsemblBacteria:EBESCT00000014610 GeneID:12930232 GeneID:947244
KEGG:ecj:Y75_p2721 KEGG:eco:b2784 PATRIC:32120984 EchoBASE:EB0828
EcoGene:EG10835 HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ
ProtClustDB:PRK10872 BioCyc:EcoCyc:RELA-MONOMER
BioCyc:ECOL316407:JW2755-MONOMER BioCyc:MetaCyc:RELA-MONOMER
ChEMBL:CHEMBL1163114 Genevestigator:P0AG20 GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 Uniprot:P0AG20
Length = 744
Score = 376 (137.4 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 87/261 (33%), Positives = 140/261 (53%)
Query: 260 VETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKL 319
VE +L+ + + + A LL D +S D + + G V +L+ GV ++ + +L
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQL 119
Query: 320 ARENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFAKETL 378
+ + + + D + M LAM D R V+IKLA+R+ ++ + P +R AKE
Sbjct: 120 KATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECT 179
Query: 379 EIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC-FD-EAMVTSAIEKLEQA 436
I+ PLANRLGI K +LE+ CF++L+P ++ ++ L E D E + + L
Sbjct: 180 NIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAE 239
Query: 437 LKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQ 496
+K + + V GR K +YSI KM KK L DE+ D+ +R++ E +DCY AL +VH
Sbjct: 240 MKAEGVKAEVY-GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHT 298
Query: 497 LWAEVPGKMKDYITRPKFNGY 517
+ +P + DY+ PK NGY
Sbjct: 299 HYRHLPDEFDDYVANPKPNGY 319
>UNIPROTKB|Q4K899 [details] [associations]
symbol:relA "GTP diphosphokinase" species:220664
"Pseudomonas protegens Pf-5" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015969 "guanosine tetraphosphate
metabolic process" evidence=ISS] [GO:0034198 "cellular response to
amino acid starvation" evidence=ISS] InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00954 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166
GO:GO:0016301 EMBL:CP000076 GenomeReviews:CP000076_GR
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0034198 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
OMA:HRADCDQ GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691
RefSeq:YP_261534.1 ProteinModelPortal:Q4K899 STRING:Q4K899
GeneID:3478565 KEGG:pfl:PFL_4446 PATRIC:19878324
ProtClustDB:CLSK866228 BioCyc:PFLU220664:GIX8-4481-MONOMER
Uniprot:Q4K899
Length = 747
Score = 370 (135.3 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 86/263 (32%), Positives = 147/263 (55%)
Query: 260 VETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLS-K 318
+E A +LA + + + A +L+ + + + + + FG V L++GV +++ ++
Sbjct: 69 LEIAEILADLKLDQDSLVAAVLYRGVREGQIQLPAVSQRFGPVVTKLIDGVLRMAAITAS 128
Query: 319 LA-RENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQRFAKE 376
L+ R++ + + L M +AM D R LIKLA+R + + + KR R A+E
Sbjct: 129 LSPRQSLVLGTQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKSADEEKRNRVARE 188
Query: 377 TLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC-FD-EAMVTSAIEKLE 434
+I+ PLA+RLGI K +LE+L F++L P+Q+ +++ L E D E ++ + +L+
Sbjct: 189 VFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAKLLHERRLDRERFISDVMNQLQ 248
Query: 435 QALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVV 494
LK ++ + GR K +YSI KM +K L +I+D+ +R++V DCY AL +V
Sbjct: 249 NELKATGVN-ADISGRAKHIYSIWRKMQRKGLEFSQIYDVRAVRVLVPEMRDCYTALGIV 307
Query: 495 HQLWAEVPGKMKDYITRPKFNGY 517
H LW +P + DYI PK NGY
Sbjct: 308 HTLWRHIPKEFDDYIANPKENGY 330
>UNIPROTKB|Q9S3S3 [details] [associations]
symbol:relA "PpGpp synthetase I" species:666 "Vibrio
cholerae" [GO:0009267 "cellular response to starvation"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GenomeReviews:AE003852_GR
GO:GO:0009267 Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969
TIGRFAMs:TIGR00691 EMBL:AF175295 PIR:H82074
ProteinModelPortal:Q9S3S3 DNASU:2612993 PATRIC:20083923
ProtClustDB:CLSK874804 Uniprot:Q9S3S3
Length = 738
Score = 357 (130.7 bits), Expect = 8.3e-32, P = 8.3e-32
Identities = 83/260 (31%), Positives = 134/260 (51%)
Query: 261 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 320
E +L + + + A LL L + + +G V L+ GV +++ + +L
Sbjct: 60 EMIEILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLN 119
Query: 321 RENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLE 379
+ + + + D + M LAM D R V+IKLA+R+ N+ + P R+ AKE
Sbjct: 120 VTMHGSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECAN 179
Query: 380 IFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQAL 437
I+ PLANRLGI K ++E+ F++ PD + +++ +L E E + + L +
Sbjct: 180 IYAPLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEM 239
Query: 438 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 497
K I+ V GR K +YSI KM KK L DE+ D+ +R+I + +DCY AL +VH
Sbjct: 240 KQSGINAEV-SGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTK 298
Query: 498 WAEVPGKMKDYITRPKFNGY 517
+ +P + DY+ PK NGY
Sbjct: 299 YKHLPNEFDDYVANPKPNGY 318
>TIGR_CMR|VC_2451 [details] [associations]
symbol:VC_2451 "GTP pyrophosphokinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166
GenomeReviews:AE003852_GR GO:GO:0009267 Gene3D:3.10.20.30
InterPro:IPR012675 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0015969 TIGRFAMs:TIGR00691 EMBL:AF175295 PIR:H82074
ProteinModelPortal:Q9S3S3 DNASU:2612993 PATRIC:20083923
ProtClustDB:CLSK874804 Uniprot:Q9S3S3
Length = 738
Score = 357 (130.7 bits), Expect = 8.3e-32, P = 8.3e-32
Identities = 83/260 (31%), Positives = 134/260 (51%)
Query: 261 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 320
E +L + + + A LL L + + +G V L+ GV +++ + +L
Sbjct: 60 EMIEILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLN 119
Query: 321 RENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLE 379
+ + + + D + M LAM D R V+IKLA+R+ N+ + P R+ AKE
Sbjct: 120 VTMHGSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECAN 179
Query: 380 IFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQAL 437
I+ PLANRLGI K ++E+ F++ PD + +++ +L E E + + L +
Sbjct: 180 IYAPLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEM 239
Query: 438 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 497
K I+ V GR K +YSI KM KK L DE+ D+ +R+I + +DCY AL +VH
Sbjct: 240 KQSGINAEV-SGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTK 298
Query: 498 WAEVPGKMKDYITRPKFNGY 517
+ +P + DY+ PK NGY
Sbjct: 299 YKHLPNEFDDYVANPKPNGY 318
>TIGR_CMR|CPS_4115 [details] [associations]
symbol:CPS_4115 "GTP pyrophosphokinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301 EMBL:CP000083
GenomeReviews:CP000083_GR Gene3D:3.10.20.30 InterPro:IPR012675
eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_270770.1
ProteinModelPortal:Q47WQ2 STRING:Q47WQ2 DNASU:3518529
GeneID:3518529 KEGG:cps:CPS_4115 PATRIC:21471093
BioCyc:CPSY167879:GI48-4128-MONOMER Uniprot:Q47WQ2
Length = 737
Score = 343 (125.8 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 88/279 (31%), Positives = 145/279 (51%)
Query: 256 LLH-CVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLS 314
LLH +E +L+ + ++ + A + L + + +++ F + L +GV +++
Sbjct: 53 LLHKSMEMVEILSGLNLDADSLVAAFISPLLANDIIEIEFVKEHFSKDILMLCQGVEQMA 112
Query: 315 QLSKLARENNTASKTV--EADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQ 371
+ L ++++ +S D + M LAM D RAV+IKLA+RL ++ R
Sbjct: 113 AIKALRQQSSQSSDQAPQNIDNIRRMLLAMVDDVRAVVIKLAERLCDLREKKNSDEETRV 172
Query: 372 RFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAMVTSA 429
AKE+ I+ PLANRLGI K +LE++ F++L+P + +++ L E E + S
Sbjct: 173 LVAKESANIYAPLANRLGIGQLKWELEDISFRYLHPQVYKKIAKLLDETRLEREQYMASF 232
Query: 430 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 489
+ L L I V GR K ++SI KM +K L D++ D+ +R++VE +DCY
Sbjct: 233 VGHLNSELNALAIKGEVY-GRPKHIFSIWKKMQQKSLDFDQLFDVRAVRVVVEKVQDCYS 291
Query: 490 ALRVVHQLWAEVPGKMKDYITRPKFNGY-IFSQVVLSYE 527
AL +VH W + + DY+ PK NGY VVL E
Sbjct: 292 ALGIVHTEWQHIAKEFSDYVATPKANGYQSIHTVVLGPE 330
>TAIR|locus:2090487 [details] [associations]
symbol:CRSH "Ca2+-activated RelA/spot homolog"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA;ISS] [GO:0015969 "guanosine tetraphosphate
metabolic process" evidence=IEA] [GO:0008728 "GTP diphosphokinase
activity" evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR002048 InterPro:IPR007685 InterPro:IPR011992
Pfam:PF04607 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054
SMART:SM00954 Prosite:PS00018 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 HSSP:P09860 eggNOG:COG0317 InterPro:IPR026020
PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969 EMBL:BT006180
EMBL:AK228656 IPI:IPI00528710 RefSeq:NP_188374.2 UniGene:At.38719
ProteinModelPortal:Q84R11 SMR:Q84R11 PaxDb:Q84R11 PRIDE:Q84R11
EnsemblPlants:AT3G17470.1 GeneID:821012 KEGG:ath:AT3G17470
TAIR:At3g17470 HOGENOM:HOG000241233 InParanoid:Q84R11 OMA:RYKSRYS
PhylomeDB:Q84R11 ProtClustDB:CLSN2679918 ArrayExpress:Q84R11
Genevestigator:Q84R11 Uniprot:Q84R11
Length = 583
Score = 222 (83.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 65/243 (26%), Positives = 130/243 (53%)
Query: 248 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 307
+ + G L + +++LA + ++ V++A +L + +D +S + G G A L+
Sbjct: 105 LASDGRSPLSKALSLSIILADLQMDAEVISASILSEVVDANAISIYEVRDHIGTGTAHLL 164
Query: 308 EGVSKLSQLS-KL-ARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDAL 365
+ ++ + K+ ++ TA+ L +L D RAV++ L +L M LD L
Sbjct: 165 HEIFRVKNIPFKVDVLDDETAAS------LRKFYLTYYDIRAVIMDLVSKLDEMRHLDHL 218
Query: 366 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDE 423
P ++Q + E L+I+ PLA+ +G + ++LE++ F++L P + L S L E +
Sbjct: 219 PRYRQQILSLEVLKIYSPLAHAVGANHLSLELEDISFRYLFPCSYIYLDSWLRGHENGSK 278
Query: 424 AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 478
++ E+L ++LKD + ++ + + GR+KS YS+ K+L+ +E++D+ GLR
Sbjct: 279 PLIDVYKEQLHRSLKDDLVLAEMVNDVYIKGRYKSRYSMMKKLLRDGRKPEEVNDVLGLR 338
Query: 479 LIV 481
+I+
Sbjct: 339 VIL 341
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/102 (37%), Positives = 61/102 (59%)
Query: 431 EKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI----- 480
E+L ++LKD + ++ + + GR+KS YS+ K+L+ +E++D+ GLR+I
Sbjct: 286 EQLHRSLKDDLVLAEMVNDVYIKGRYKSRYSMMKKLLRDGRKPEEVNDVLGLRVILMPNS 345
Query: 481 ----VE-NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
VE E+ CY+ ++ LW E+P + KDYI RPK NGY
Sbjct: 346 VVNDVEVGEKACYRTSEIIRSLWKEIPHRTKDYIARPKENGY 387
>UNIPROTKB|Q722A6 [details] [associations]
symbol:LMOf2365_0828 "HD domain protein" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003607 SMART:SM00471 GO:GO:0003824
GO:GO:0008152 EMBL:AE017262 GenomeReviews:AE017262_GR
eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000265510 RefSeq:YP_013431.1 ProteinModelPortal:Q722A6
STRING:Q722A6 GeneID:2797284 KEGG:lmf:LMOf2365_0828 PATRIC:20322872
OMA:WYNEGIK ProtClustDB:CLSK564112 Uniprot:Q722A6
Length = 180
Score = 146 (56.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 39/104 (37%), Positives = 55/104 (52%)
Query: 242 RAHRGQMRA-SGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 300
+AH GQ+R +G+PY H + A +L G VV AGLLHD ++D ++ I FG
Sbjct: 11 KAHSGQVRKITGEPYFSHPLNVARILRRAGFREEVVVAGLLHDAVEDTEMTDADIRAAFG 70
Query: 301 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD 344
A VADLV ++ LS R+ +T + V L L +AD
Sbjct: 71 AEVADLVASHTENKTLSWEERKAHTIEQ-VRTGNLEEKALIVAD 113
>UNIPROTKB|Q8N4P3 [details] [associations]
symbol:HDDC3 "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1" species:9606 "Homo sapiens"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA] InterPro:IPR003607 SMART:SM00471 GO:GO:0046872
GO:GO:0008152 EMBL:AC068831 CTD:374659 HOVERGEN:HBG081594 KO:K01139
OrthoDB:EOG49PB0R GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 OMA:PEGWSEH EMBL:BC033794 IPI:IPI00394782
IPI:IPI00789618 RefSeq:NP_940929.1 UniGene:Hs.349979 PDB:3NR1
PDBsum:3NR1 ProteinModelPortal:Q8N4P3 SMR:Q8N4P3 IntAct:Q8N4P3
MINT:MINT-1475376 PhosphoSite:Q8N4P3 DMDM:122065202 PaxDb:Q8N4P3
PRIDE:Q8N4P3 DNASU:374659 Ensembl:ENST00000330334
Ensembl:ENST00000394272 GeneID:374659 KEGG:hsa:374659
UCSC:uc002bqe.4 GeneCards:GC15M091474 H-InvDB:HIX0012581
HGNC:HGNC:30522 HPA:HPA040895 neXtProt:NX_Q8N4P3
PharmGKB:PA142671696 eggNOG:NOG113345 InParanoid:Q8N4P3
EvolutionaryTrace:Q8N4P3 GenomeRNAi:374659 NextBio:100241
Bgee:Q8N4P3 CleanEx:HS_HDDC3 Genevestigator:Q8N4P3
GermOnline:ENSG00000184508 Uniprot:Q8N4P3
Length = 179
Score = 142 (55.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 55/172 (31%), Positives = 80/172 (46%)
Query: 240 AERAHRGQMRAS--GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYI 295
A R HR Q R G PY+ H + A +L G VV A LLHDT++D + D +
Sbjct: 15 AARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEV 74
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 355
FGA V LVE V+ L KL R+ RL + A L+KLAD+
Sbjct: 75 ELHFGAQVRRLVEEVTDDKTLPKLERK-----------RLQVEQAPHSSPGAKLVKLADK 123
Query: 356 LHNMMTLDALPLCKRQRFAKETLEIFVPLANRL--GISTWKVQLENLCFKHL 405
L+N+ L+ C + +++ ++ + A ++ G+ QLE KHL
Sbjct: 124 LYNLRDLNR---CTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEE-ALKHL 171
>ZFIN|ZDB-GENE-050417-377 [details] [associations]
symbol:hddc3 "HD domain containing 3" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR003607
SMART:SM00471 ZFIN:ZDB-GENE-050417-377 GO:GO:0046872 GO:GO:0008152
EMBL:BC092780 IPI:IPI00499964 RefSeq:NP_001017835.1
UniGene:Dr.85187 HSSP:Q54089 ProteinModelPortal:Q568P1
GeneID:550533 KEGG:dre:550533 CTD:374659 eggNOG:COG0317
HOVERGEN:HBG081594 InParanoid:Q568P1 KO:K01139 OrthoDB:EOG49PB0R
NextBio:20879774 GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262
Uniprot:Q568P1
Length = 180
Score = 142 (55.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 44/130 (33%), Positives = 69/130 (53%)
Query: 238 YEAERAHRGQMRAS--GDPYLLHCVETAMLLAAIG--ANSTVVAAGLLHDTLDDAFLSYD 293
+ AE+ HR Q G PY+ H + A +L+ G + V+ A LLHDT++D +++
Sbjct: 15 FAAEK-HRNQRHKDPEGTPYINHPIGVARILSHEGEITDVEVIQAALLHDTVEDTDTTFE 73
Query: 294 YIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLA 353
+ FGA VA +V+GV+ L K RE + VE H + +A L+KLA
Sbjct: 74 ELESVFGATVARIVQGVTDDKSLPKAERER----QQVE----HAPHCSH---QAKLVKLA 122
Query: 354 DRLHNMMTLD 363
D+L+N+ L+
Sbjct: 123 DKLYNLRDLN 132
>RGD|1311839 [details] [associations]
symbol:Hddc3 "HD domain containing 3" species:10116 "Rattus
norvegicus" [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003607 InterPro:IPR006674 SMART:SM00471 RGD:1311839
GO:GO:0046872 EMBL:CH473980 GO:GO:0008152 GO:GO:0008081
Gene3D:1.10.3210.10 CTD:374659 KO:K01139 OrthoDB:EOG49PB0R
InterPro:IPR026020 PANTHER:PTHR21262 GeneTree:ENSGT00390000011608
IPI:IPI00189404 RefSeq:NP_001100998.1 UniGene:Rn.17508
Ensembl:ENSRNOT00000016445 GeneID:308758 KEGG:rno:308758
UCSC:RGD:1311839 OMA:VAGCRGT NextBio:659470 Uniprot:D4A500
Length = 179
Score = 135 (52.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 51/165 (30%), Positives = 77/165 (46%)
Query: 240 AERAHRGQMRAS--GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYI 295
A + HR Q R G PY+ H + A +L G VV A LLHDT++D + D +
Sbjct: 15 AAQKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEV 74
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 355
FGA V LVE V+ L KL R+ + H+ A L+KLAD+
Sbjct: 75 ELHFGAQVRRLVEEVTDDKTLPKLERKRQQVEQAP-----HS------SPGAKLVKLADK 123
Query: 356 LHNMMTLDALPLCKRQRFAKETLEIFVPLANRL--GISTWKVQLE 398
LHN+ L+ C + +++ ++ + A ++ G+ QLE
Sbjct: 124 LHNLRDLNR---CTPKGWSEHRVQEYFEWAAQVVKGLQGTNQQLE 165
>UNIPROTKB|H0YNP9 [details] [associations]
symbol:HDDC3 "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1" species:9606 "Homo sapiens"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR003607
SMART:SM00471 GO:GO:0003824 GO:GO:0008152 EMBL:AC068831
InterPro:IPR026020 PANTHER:PTHR21262 HGNC:HGNC:30522
ProteinModelPortal:H0YNP9 SMR:H0YNP9 PRIDE:H0YNP9
Ensembl:ENST00000559898 Bgee:H0YNP9 Uniprot:H0YNP9
Length = 143
Score = 133 (51.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 46/128 (35%), Positives = 61/128 (47%)
Query: 240 AERAHRGQMRAS--GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYI 295
A R HR Q R G PY+ H + A +L G VV A LLHDT++D + D +
Sbjct: 15 AARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEV 74
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 355
FGA V LVE V+ L KL R+ RL + A L+KLAD+
Sbjct: 75 ELHFGAQVRRLVEEVTDDKTLPKLERK-----------RLQVEQAPHSSPGAKLVKLADK 123
Query: 356 LHNMMTLD 363
L+N+ L+
Sbjct: 124 LYNLRDLN 131
>UNIPROTKB|E2QTM0 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 GO:GO:0003824 GO:GO:0008152
CTD:374659 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:AAEX03002330
RefSeq:XP_545862.1 Ensembl:ENSCAFT00000019442 GeneID:488744
KEGG:cfa:488744 NextBio:20862046 Uniprot:E2QTM0
Length = 179
Score = 129 (50.5 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 46/135 (34%), Positives = 64/135 (47%)
Query: 233 VIKAFYEAERAHRGQMRAS--GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDA 288
+++A A R HR Q R G PY+ H + A +L G VV A LLHDT++D
Sbjct: 8 LVEAADFAARKHRLQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDT 67
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAV 348
+ D + FG V LVE V+ L KL R+ RL + A
Sbjct: 68 DTTLDEVELHFGTQVRRLVEEVTDDKTLPKLERK-----------RLQVEQAPHSSPAAK 116
Query: 349 LIKLADRLHNMMTLD 363
L+KLAD+L+N+ L+
Sbjct: 117 LVKLADKLYNLRDLN 131
>UNIPROTKB|F1MR07 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA]
InterPro:IPR003607 InterPro:IPR006674 SMART:SM00471 GO:GO:0046872
GO:GO:0008152 GO:GO:0008081 Gene3D:1.10.3210.10 CTD:374659
KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:DAAA02052163
IPI:IPI00690680 RefSeq:NP_001179885.1 UniGene:Bt.62503
Ensembl:ENSBTAT00000024795 GeneID:613382 KEGG:bta:613382
NextBio:20898547 Uniprot:F1MR07
Length = 179
Score = 127 (49.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/128 (34%), Positives = 60/128 (46%)
Query: 240 AERAHRGQMRAS--GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYI 295
A R H+ Q R G PY+ H + A +L G VV A LLHDT++D + D +
Sbjct: 15 AARKHQRQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEV 74
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 355
FG V LVE V+ L KL R+ RL + A L+KLAD+
Sbjct: 75 ELHFGDQVRRLVEEVTDDKTLPKLERK-----------RLQVEHAPQSSPGAKLVKLADK 123
Query: 356 LHNMMTLD 363
L+N+ L+
Sbjct: 124 LYNLRDLN 131
>MGI|MGI:1915945 [details] [associations]
symbol:Hddc3 "HD domain containing 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 MGI:MGI:1915945 GO:GO:0046872
GO:GO:0008152 HSSP:Q54089 CTD:374659 HOVERGEN:HBG081594 KO:K01139
OrthoDB:EOG49PB0R GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 GeneTree:ENSGT00390000011608 OMA:PEGWSEH
eggNOG:NOG113345 EMBL:AK004078 EMBL:BC038310 IPI:IPI00132959
RefSeq:NP_081088.1 UniGene:Mm.21171 ProteinModelPortal:Q9D114
SMR:Q9D114 STRING:Q9D114 PhosphoSite:Q9D114 PaxDb:Q9D114
PRIDE:Q9D114 Ensembl:ENSMUST00000032747 GeneID:68695 KEGG:mmu:68695
UCSC:uc009ian.1 InParanoid:Q9D114 NextBio:327714 Bgee:Q9D114
CleanEx:MM_HDDC3 Genevestigator:Q9D114
GermOnline:ENSMUSG00000030532 Uniprot:Q9D114
Length = 179
Score = 127 (49.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/128 (34%), Positives = 60/128 (46%)
Query: 240 AERAHRGQMRAS--GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYI 295
A HR Q R G PY+ H + A +L G VV A LLHDT++D + D +
Sbjct: 15 AAHKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEV 74
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 355
FGA V LVE V+ L KL R+ + H+ A L+KLAD+
Sbjct: 75 ELHFGAQVRRLVEEVTDDKTLPKLERKRQQVEQAP-----HS------SPGAKLVKLADK 123
Query: 356 LHNMMTLD 363
L+N+ L+
Sbjct: 124 LYNLRDLN 131
>UNIPROTKB|F1RMH8 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 GO:GO:0003824 GO:GO:0008152
CTD:374659 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:CT868688
RefSeq:NP_001230338.1 UniGene:Ssc.47907 Ensembl:ENSSSCT00000002039
GeneID:100153189 KEGG:ssc:100153189 Uniprot:F1RMH8
Length = 179
Score = 125 (49.1 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 49/165 (29%), Positives = 78/165 (47%)
Query: 240 AERAHRGQMRAS--GDPYLLHCVETAMLLAA-IGANSTVVA-AGLLHDTLDDAFLSYDYI 295
A R H+ Q R G PY+ H + A +L G VV A LLHDT++D + D +
Sbjct: 15 AARKHQRQRRKDPEGTPYINHPIGVARILTREAGITDIVVLQAALLHDTVEDTDTTLDEV 74
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 355
FG V LVE V+ L KL R K ++ ++ + A L+KLAD+
Sbjct: 75 ELHFGVQVRRLVEEVTDDKTLPKLER------KQLQVEQA-----PHSSPGAKLVKLADK 123
Query: 356 LHNMMTLDALPLCKRQRFAKETLEIFVPLANRL--GISTWKVQLE 398
L+N+ L+ C + +++ ++ + A ++ G+ QLE
Sbjct: 124 LYNLRDLNR---CTPEGWSERRVQEYFEWAAQVVKGLQGTNQQLE 165
>FB|FBgn0039650 [details] [associations]
symbol:Mesh1 "Metazoan SpoT homolog-1" species:7227
"Drosophila melanogaster" [GO:0008081 "phosphoric diester hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0042594 "response to starvation" evidence=IMP]
[GO:0015971 "guanosine tetraphosphate catabolic process"
evidence=IDA] [GO:0008893 "guanosine-3',5'-bis(diphosphate)
3'-diphosphatase activity" evidence=IDA] InterPro:IPR003607
InterPro:IPR006674 Pfam:PF01966 SMART:SM00471 EMBL:AE014297
GO:GO:0046872 GO:GO:0042594 GO:GO:0008081 eggNOG:COG0317 KO:K01139
GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262 EMBL:BT024375
RefSeq:NP_651682.1 UniGene:Dm.24112 PDB:3NQW PDBsum:3NQW
ProteinModelPortal:Q9VAM9 SMR:Q9VAM9 PaxDb:Q9VAM9 PRIDE:Q9VAM9
EnsemblMetazoa:FBtr0085407 GeneID:43456 KEGG:dme:Dmel_CG11900
UCSC:CG11900-RA CTD:43456 FlyBase:FBgn0039650
GeneTree:ENSGT00390000011608 InParanoid:Q9VAM9 OMA:PEGWSEH
OrthoDB:EOG4GMSDF PhylomeDB:Q9VAM9 GenomeRNAi:43456 NextBio:834034
Bgee:Q9VAM9 GO:GO:0015971 Uniprot:Q9VAM9
Length = 179
Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 244 HRGQMRASGD--PYLLHCVETAMLLA--AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 299
HR Q R PY+ H + + +L+ A + V+ A LLHD ++D S++ + + F
Sbjct: 20 HRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDTDASFEDVEKLF 79
Query: 300 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNM 359
G V LV V+ L K R+ RL A + RA LIKLAD+L N+
Sbjct: 80 GPDVCGLVREVTDDKSLEKQERK-----------RLQIENAAKSSCRAKLIKLADKLDNL 128
Query: 360 MTL 362
L
Sbjct: 129 RDL 131
>DICTYBASE|DDB_G0287233 [details] [associations]
symbol:spoT "guanosine polyphosphate
pyrophosphohydrolase" species:44689 "Dictyostelium discoideum"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003607 SMART:SM00471
dictyBase:DDB_G0287233 GO:GO:0003824 GenomeReviews:CM000154_GR
GO:GO:0008152 EMBL:AAFI02000099 eggNOG:COG0317 KO:K01139
InterPro:IPR026020 PANTHER:PTHR21262 OMA:DDVINRH RefSeq:XP_637324.1
ProteinModelPortal:Q54KN3 EnsemblProtists:DDB0230182 GeneID:8626021
KEGG:ddi:DDB_G0287233 InParanoid:Q54KN3 ProtClustDB:CLSZ2430020
Uniprot:Q54KN3
Length = 208
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 242 RAHRGQMR--ASGDPYLLHCVETAMLLAAIGA-NSTVVAAGLLHDTLDDAFLSYDYIFRT 298
+ HR Q R + PY+ H + A L G +S ++ A +LHDT++D + + I +
Sbjct: 18 KKHRDQRRKDSHSTPYINHPIGVAYNLIKAGVYDSDILQAAILHDTIEDTQTTKEEIIKE 77
Query: 299 FGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHN 358
FG VA V V+ LSK R+ + +E H + + + L+K+AD+L N
Sbjct: 78 FGERVASYVMDVTDDKSLSKQERKKHQ----IE----HALHI---QNESKLVKMADKLFN 126
Query: 359 M 359
+
Sbjct: 127 L 127
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 533 477 0.00079 119 3 11 22 0.49 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 615 (65 KB)
Total size of DFA: 271 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.62u 0.33s 38.95t Elapsed: 00:00:02
Total cpu time: 38.63u 0.33s 38.96t Elapsed: 00:00:02
Start: Tue May 21 02:03:04 2013 End: Tue May 21 02:03:06 2013