BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009478
(533 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224054061|ref|XP_002298089.1| predicted protein [Populus trichocarpa]
gi|222845347|gb|EEE82894.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/548 (70%), Positives = 440/548 (80%), Gaps = 36/548 (6%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCS + QINAH YDF+LNSRSS++ SS+A++ SQK +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSTPYPCQINAHANYDFELNSRSSSTASSSASS--SQKPIVGGL 58
Query: 62 SCLFSSSS-----------EMGSY-RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPV 109
S LFSS + E+G + R +ELKELSSSF Y+PSK C + SS+KRDQSPV
Sbjct: 59 SRLFSSPAVKHASFSGDREELGWHDRGDELKELSSSF--CYTPSK-CLAGSSIKRDQSPV 115
Query: 110 SVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHT-----FFKGSSGLFNGFVRNA 164
SV QG VSCS SSPP R ARE++ +V F + F G++GLFNGFVRNA
Sbjct: 116 SVLQGQVSCS---------SSPPTRIARERSGCDVGFQSSIHGSFRSGANGLFNGFVRNA 166
Query: 165 LGSCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLK 224
LGSCVDYDS SF VHN ++ SS+ ++DELTF+MED+ V+ N E YAKE L AQ +
Sbjct: 167 LGSCVDYDSPSFEVHNNG--IDEDSSSVVVDELTFSMEDSCVDANYEPYAKELLFGAQSR 224
Query: 225 HKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDT 284
H IF +DFVIKAF+EAE+AHRGQMRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDT
Sbjct: 225 HTIFCDDFVIKAFHEAEKAHRGQMRASGDPYLQHCVETAVLLAIIGANSTVVAAGLLHDT 284
Query: 285 LDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD 344
LDD+F+SYD+IF+TFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD
Sbjct: 285 LDDSFISYDHIFKTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD 344
Query: 345 ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKH 404
ARAVLIKLADRLHNMMTLDALPL K+QRFAKET EIF PLANRLGIS+WK QLENLCFKH
Sbjct: 345 ARAVLIKLADRLHNMMTLDALPLVKQQRFAKETSEIFAPLANRLGISSWKEQLENLCFKH 404
Query: 405 LNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
LNPDQH +LS++LV+ FDEAM+ SA EKLE+AL D+ IS+ L GRHKSLYS +CKMLKK
Sbjct: 405 LNPDQHKDLSARLVDSFDEAMIASAKEKLEKALTDEAISY-DLSGRHKSLYSTYCKMLKK 463
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVL 524
KL MD+IHDI+GLRLIVEN EDCY+ALRVV +LW+EVPGK KDYI PKFNGY V+
Sbjct: 464 KLNMDQIHDIHGLRLIVENNEDCYRALRVVQRLWSEVPGKFKDYINNPKFNGYRSLHTVV 523
Query: 525 SYERNILL 532
E + L
Sbjct: 524 MGEGTVPL 531
>gi|33637487|gb|AAQ23899.1| RSH2 [Nicotiana tabacum]
Length = 718
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/519 (71%), Positives = 423/519 (81%), Gaps = 21/519 (4%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCS + QIN+H +YDFDLN RSS+S+S+++++ K +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSTPYPCQINSHGSYDFDLNGRSSSSSSTSSSS---GKSFVGGL 57
Query: 62 SCLFSSSSEMGSYRS--EELKELSSSFG-YAYSPSKLCGSSSSLKRDQSPVSVFQGPVSC 118
S LFSS + +Y + E+L L G S + SSSLKRDQSPVSVFQGP S
Sbjct: 58 SSLFSSPTVKANYSTGTEDLGSLWHDRGDELSSSFRCSSLSSSLKRDQSPVSVFQGPAST 117
Query: 119 SGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSCVDYDSSSFRV 178
S +G S SRS PP R A + + G+ GLFNGFVR+ALGSCVD+D ++FRV
Sbjct: 118 SSSGIGSCSRS-PPRRIAGDVGSIR-------SGTGGLFNGFVRHALGSCVDHDPTTFRV 169
Query: 179 HNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFY 238
+ D+ S+ L+DELTFNME+ +E N E YAK+ L NAQ +HKIF +DFVIKAFY
Sbjct: 170 LDVDS-----PSSGLLDELTFNMEEGFLESNSEPYAKDLLLNAQSRHKIFCDDFVIKAFY 224
Query: 239 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 298
EAE+AHRGQ+RASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++YDYIFRT
Sbjct: 225 EAEKAHRGQVRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDTFMTYDYIFRT 284
Query: 299 FGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHN 358
GAGVADLVEGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAMADARAVLIKLADRLHN
Sbjct: 285 LGAGVADLVEGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMADARAVLIKLADRLHN 344
Query: 359 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV 418
MMTLDALPL K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV
Sbjct: 345 MMTLDALPLAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPDQHNELSSKLV 404
Query: 419 ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 478
+ FDEAM+TS++ KLEQALKD ++S+ VL GRHKSLYSI+CKMLKKKL MDE+HDI+GLR
Sbjct: 405 KSFDEAMITSSVGKLEQALKDDSVSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLR 464
Query: 479 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
LIVEN+EDCY+ALRVVHQLW+EVPG+ KDYI PKFNGY
Sbjct: 465 LIVENKEDCYKALRVVHQLWSEVPGRYKDYIANPKFNGY 503
>gi|225442114|ref|XP_002273796.1| PREDICTED: GTP pyrophosphokinase-like [Vitis vinifera]
Length = 724
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/526 (71%), Positives = 426/526 (80%), Gaps = 32/526 (6%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCSA+H QIN+H+++DF+LNSRSS+S +++ + Q+ +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSASHPCQINSHSSHDFELNSRSSSSATASPS----QRPAMGGL 56
Query: 62 SCLFSSSS-------EMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQS---PVSV 111
SCLFSS + E+GS + +ELSSSF C SSLKRD+S PVSV
Sbjct: 57 SCLFSSPAVKHAGGEELGSMWHDRGEELSSSF---------CYLGSSLKRDRSESSPVSV 107
Query: 112 FQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSCVDY 171
FQGPVSCS S S SPP+R ARE++ + G+SGLF+GFVR ALGS +DY
Sbjct: 108 FQGPVSCSS--SVGGSSRSPPMRIARERSGGDGVSRV---GTSGLFSGFVRGALGSYIDY 162
Query: 172 DSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRED 231
DS +F + G LN SS+ L+DELTFNMEDN + N E + K+ L AQL+HKIF ED
Sbjct: 163 DSPTFEI--GGGALNADSSSVLVDELTFNMEDNFPDSNSEPHVKDLLLGAQLRHKIFSED 220
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV+KAFYEAERAHRGQMRASGDPYL HCVETA+LLA IGANSTVV +GLLHDTLDD+F+
Sbjct: 221 FVVKAFYEAERAHRGQMRASGDPYLQHCVETAVLLAKIGANSTVVVSGLLHDTLDDSFMG 280
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIK 351
YD IF TFGAGVADLVEGVSKLSQLSKLAR+NNTASKTVEADRLHTMFLAMADARAVLIK
Sbjct: 281 YDDIFGTFGAGVADLVEGVSKLSQLSKLARDNNTASKTVEADRLHTMFLAMADARAVLIK 340
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNMMTLDALPL K+QRFAKETLEIFVPLANRLGISTWK QLENLCFKHLNPDQH
Sbjct: 341 LADRLHNMMTLDALPLGKQQRFAKETLEIFVPLANRLGISTWKEQLENLCFKHLNPDQHK 400
Query: 412 ELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
ELSSKLV+ FDEAM+TSA EKLE ALKD+ IS+ VL GRHKSLYSI+CKMLKK +TMDEI
Sbjct: 401 ELSSKLVKSFDEAMITSAKEKLEPALKDEAISYHVLSGRHKSLYSIYCKMLKKNMTMDEI 460
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HDI+GLRLIVENEEDCY+AL VVH+LW+EVPG+ KDYI KFNGY
Sbjct: 461 HDIHGLRLIVENEEDCYKALGVVHRLWSEVPGRFKDYIKHSKFNGY 506
>gi|15822693|gb|AAL03950.1| relA/spoT-like protein RSH2 [Nicotiana tabacum]
Length = 643
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/519 (71%), Positives = 423/519 (81%), Gaps = 21/519 (4%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCS + QIN+H +YDFDLN RSS+S+S+++++ K +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSTPYPCQINSHGSYDFDLNGRSSSSSSTSSSS---GKSFVGGL 57
Query: 62 SCLFSSSSEMGSYRS--EELKELSSSFG-YAYSPSKLCGSSSSLKRDQSPVSVFQGPVSC 118
S LFSS + +Y + E+L L G S + SSSLKRDQSPVSVFQGP S
Sbjct: 58 SSLFSSPTVKANYSTGTEDLGSLWHDRGDELSSSFRCSSLSSSLKRDQSPVSVFQGPAST 117
Query: 119 SGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSCVDYDSSSFRV 178
S +G S SRS PP R A + + G+ GLFNGFVR+ALGSCVD+D ++FRV
Sbjct: 118 SSSGIGSCSRS-PPRRIAGDVGSIR-------SGTGGLFNGFVRHALGSCVDHDPTTFRV 169
Query: 179 HNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFY 238
+ D+ S+ L+DELTFNME+ +E N E YAK+ L NAQ +HKIF +DFVIKAFY
Sbjct: 170 LDVDS-----PSSGLLDELTFNMEEGFLESNSEPYAKDLLLNAQSRHKIFCDDFVIKAFY 224
Query: 239 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 298
EAE+AHRGQ+RASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++YDYIFRT
Sbjct: 225 EAEKAHRGQVRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDTFMTYDYIFRT 284
Query: 299 FGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHN 358
GAGVADLVEGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAMADARAVLIKLADRLHN
Sbjct: 285 LGAGVADLVEGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMADARAVLIKLADRLHN 344
Query: 359 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV 418
MMTLDALPL K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV
Sbjct: 345 MMTLDALPLAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPDQHNELSSKLV 404
Query: 419 ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 478
+ FDEAM+TS++ KLEQALKD ++S+ VL GRHKSLYSI+CKMLKKKL MDE+HDI+GLR
Sbjct: 405 KSFDEAMITSSVGKLEQALKDDSVSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLR 464
Query: 479 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
LIVEN+EDCY+ALRVVHQLW+EVPG+ KDYI PKFNGY
Sbjct: 465 LIVENKEDCYKALRVVHQLWSEVPGRYKDYIANPKFNGY 503
>gi|15081594|gb|AAK82651.1| RSH-like protein [Capsicum annuum]
Length = 721
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/529 (68%), Positives = 418/529 (79%), Gaps = 41/529 (7%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAVPTIALYASPPSSVCS +Q ++H +YDFDLN RS++S+SST ++ SQK +GGLS
Sbjct: 1 MAVPTIALYASPPSSVCSTPYQCHSHASYDFDLNGRSTSSSSSTTSS--SQKSIVGGLSS 58
Query: 64 LFSSSS------------EMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPVS 110
LFSS + +GS + ELSSSF SSLKRD QSPVS
Sbjct: 59 LFSSPTVKANYSTGTEDLGLGSLWHDRGDELSSSF-----------RGSSLKRDHQSPVS 107
Query: 111 VFQGPVSCS--GNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSC 168
VFQGPVSCS +G SYSRS PP R + + GS GLFNGFVR+ALGSC
Sbjct: 108 VFQGPVSCSTSSSGIGSYSRS-PPKRIGGDVCSIR-------SGSGGLFNGFVRHALGSC 159
Query: 169 VDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIF 228
VD+D ++F+V + D+ S+ L+DELTFNME+ +E N E YAK L AQ +HKIF
Sbjct: 160 VDHDPATFQVLDVDS-----GSSGLLDELTFNMEEGFLESNSEPYAKNLLLGAQARHKIF 214
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
+DFV+KAFYEAE+AHRGQ+RA+GDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD
Sbjct: 215 YDDFVVKAFYEAEKAHRGQVRATGDPYLQHCVETAVLLATIGANSTVVAAGLLHDTLDDT 274
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAV 348
F++YDYIFRT GAGVADLVEGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAM DARAV
Sbjct: 275 FITYDYIFRTLGAGVADLVEGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMTDARAV 334
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM+TLDALP K+QRFAKETLEIF PLANRLGISTWK QLEN CFKHLNPD
Sbjct: 335 LVKLADRLHNMITLDALPPMKQQRFAKETLEIFAPLANRLGISTWKEQLENQCFKHLNPD 394
Query: 409 QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
QH ELSSKL++ FDEAM+TSA+ KLEQALKDK++S+ VL GRHKSLYSI+CKMLKKKL M
Sbjct: 395 QHNELSSKLMDSFDEAMITSAVGKLEQALKDKSLSYHVLSGRHKSLYSIYCKMLKKKLNM 454
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE+HDI+GLRLIVE EEDCY+AL+VVHQLW EVPG+ KDYI +PK NGY
Sbjct: 455 DEVHDIHGLRLIVETEEDCYKALQVVHQLWCEVPGRSKDYIAKPKCNGY 503
>gi|356558920|ref|XP_003547750.1| PREDICTED: uncharacterized protein LOC100787301 [Glycine max]
Length = 715
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/542 (68%), Positives = 422/542 (77%), Gaps = 43/542 (7%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPSSVCS HQINAH +YDF+L SRSS+ STA +SQK +GGLSC
Sbjct: 1 MAVSTIALYASPPSSVCSTPHQINAHASYDFELGSRSSSPAGSTAPPSTSQKPVMGGLSC 60
Query: 64 LFSSS----------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSVFQ 113
LFSS S S +E+KELSSS ++YSPSK GSS KRDQSPVSVF
Sbjct: 61 LFSSPAPAVKHAPPLSSNFSGEEDEMKELSSS--FSYSPSKFAGSS--WKRDQSPVSVFH 116
Query: 114 GPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS-CVDYD 172
GPVSCS + R + +F G+SGLF+GFVRNALGS C+DYD
Sbjct: 117 GPVSCS--------------SSGRSSTGSSSRIRSFRGGTSGLFDGFVRNALGSSCLDYD 162
Query: 173 SSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEG--NLETYAKEFLANAQLKHKIFRE 230
L+ G S+A+IDELTFN+EDN VEG + E YAK+ L AQ++HKIF E
Sbjct: 163 ------------LDAGDSSAMIDELTFNLEDNFVEGGFHFEPYAKKLLLGAQMRHKIFCE 210
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+FVIKAF EAE+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHD+LDDAFL
Sbjct: 211 EFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFL 270
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLI 350
+YDYI FGAGVADLVEGVSKLS LSKLARENNTASK+VEADRLHTMFL MADARAVLI
Sbjct: 271 TYDYIVGMFGAGVADLVEGVSKLSHLSKLARENNTASKSVEADRLHTMFLGMADARAVLI 330
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNMMTLDALP+ KRQRFAKETLEIF PLANRLGISTWK QLENLCFKHLNP H
Sbjct: 331 KLADRLHNMMTLDALPVAKRQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSHH 390
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
ELSSKLVE +D+AM+TSAIE+LE+ALKD+ IS+ V+ GRHKSLYS++CKMLKKKLT+D+
Sbjct: 391 EELSSKLVESYDDAMITSAIERLEEALKDEGISYNVISGRHKSLYSVYCKMLKKKLTIDD 450
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVLSYERNI 530
IHDIYGLRLIV+ EEDCY+AL VVH+LW+EVPGK+KDYI RPKFNGY V+ E +
Sbjct: 451 IHDIYGLRLIVDKEEDCYKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKV 510
Query: 531 LL 532
L
Sbjct: 511 PL 512
>gi|224070802|ref|XP_002303242.1| predicted protein [Populus trichocarpa]
gi|222840674|gb|EEE78221.1| predicted protein [Populus trichocarpa]
Length = 737
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/550 (69%), Positives = 440/550 (80%), Gaps = 38/550 (6%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCS+ + QINAH TYDF+LNSRSS++TSS+A++ SQK +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSSPYPCQINAHATYDFELNSRSSSTTSSSASS--SQKPIVGGL 58
Query: 62 SCLFSSSS-----------EMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQS 107
S LFSS + E+GS R +ELKEL SSF Y+PSK + SS+KRDQS
Sbjct: 59 SRLFSSPAVKHASFSGDREELGSLWHDRGDELKELGSSF--CYTPSKYL-AGSSIKRDQS 115
Query: 108 PVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHT-----FFKGSSGLFNGFVR 162
PVSV G VSCS SSPP++T RE++ +V F + + G++GLFNGFVR
Sbjct: 116 PVSVLHGQVSCS---------SSPPMKTTRERSGCDVGFQSSIHGPYRGGANGLFNGFVR 166
Query: 163 NALGSCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQ 222
NALGSCVDYDS SF V D V + GSS+ +DELTF MED+ VE N E YAK+ L AQ
Sbjct: 167 NALGSCVDYDSPSFEVRR-DGV-DYGSSSVAVDELTFAMEDSFVEANYEPYAKKLLLGAQ 224
Query: 223 LKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLH 282
+HKIF +DFVIKAFYEAE+AHRGQMRASGDPYL HCVETA+LLA IGANS+VVAAGLLH
Sbjct: 225 SRHKIFCDDFVIKAFYEAEKAHRGQMRASGDPYLEHCVETAVLLAIIGANSSVVAAGLLH 284
Query: 283 DTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM 342
D+LDD+FLSYDYIF+TFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM
Sbjct: 285 DSLDDSFLSYDYIFKTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM 344
Query: 343 ADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCF 402
ADARAVLIKLADRLHNM+TLDALPL K+QRFAKET++IF PLANRLGISTWK QLE LCF
Sbjct: 345 ADARAVLIKLADRLHNMITLDALPLVKQQRFAKETMQIFAPLANRLGISTWKEQLETLCF 404
Query: 403 KHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
KHLNPDQH LS++LVE FDEAM+ S EKL++AL D+ IS+ L GRHKSLYSIHCKM
Sbjct: 405 KHLNPDQHRHLSARLVESFDEAMIASTKEKLDKALTDEAISY-NLHGRHKSLYSIHCKMS 463
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQV 522
KKKL MD+IHDI+GLRLIVEN+EDCY+ALRVVH LW+EVPG+ KDYIT PKFNGY
Sbjct: 464 KKKLNMDQIHDIHGLRLIVENKEDCYRALRVVHCLWSEVPGQFKDYITNPKFNGYRSLHT 523
Query: 523 VLSYERNILL 532
V+ E + L
Sbjct: 524 VVMGEGTVPL 533
>gi|356519788|ref|XP_003528551.1| PREDICTED: uncharacterized protein LOC100789399 [Glycine max]
Length = 714
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/542 (68%), Positives = 423/542 (78%), Gaps = 44/542 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPS VCS +HQIN H YDF+L SRSS+ STA +SQK +GGLSC
Sbjct: 1 MAVSTIALYASPPSGVCSTSHQINCHAGYDFELGSRSSSPAGSTAPPSTSQKPVMGGLSC 60
Query: 64 LFSSS----------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSVFQ 113
LFSS S S +E+KELSSS ++YSPSK GSS KRDQSPVSVF
Sbjct: 61 LFSSPAPPRKHAPQLSSNFSGEEDEMKELSSS--FSYSPSKFAGSS--WKRDQSPVSVFH 116
Query: 114 GPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS-CVDYD 172
GPVSCS +G S + PIR+ F G+SGLF+GFVRNALGS C+DYD
Sbjct: 117 GPVSCSSSGRSSTGST--PIRS-------------FRGGTSGLFDGFVRNALGSSCLDYD 161
Query: 173 SSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEG--NLETYAKEFLANAQLKHKIFRE 230
L+ G S+A++DELTFN+EDN VEG + E YAK+ L AQ++HKIF E
Sbjct: 162 ------------LDAGDSSAMVDELTFNLEDNFVEGGFHFEPYAKKLLLGAQMRHKIFCE 209
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+FVIKAF EAE+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHD+LDDAFL
Sbjct: 210 EFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFL 269
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLI 350
+YDYI FG GVADLVEGVSKLS LSKLARENNTASK+VEADRLHTMFL MADARAVL+
Sbjct: 270 TYDYIVGVFGTGVADLVEGVSKLSHLSKLARENNTASKSVEADRLHTMFLGMADARAVLV 329
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNMMTLDALP K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNP QH
Sbjct: 330 KLADRLHNMMTLDALPGAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSQH 389
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
ELSSKLVE +D+AM+TSAIE+LEQALKD+ IS+ V+ GRHKSLYSI+CKMLKKKLT+D+
Sbjct: 390 EELSSKLVESYDDAMITSAIERLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDD 449
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVLSYERNI 530
IHDIYGLRLIV+ EEDCY+AL VVH+LW+EVPGK+KDYI RPKFNGY V+ E +
Sbjct: 450 IHDIYGLRLIVDKEEDCYKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKV 509
Query: 531 LL 532
L
Sbjct: 510 PL 511
>gi|449461673|ref|XP_004148566.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
gi|449528710|ref|XP_004171346.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
Length = 733
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/549 (65%), Positives = 433/549 (78%), Gaps = 31/549 (5%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIA Y SPPS++CS+ H QIN H + D + SRSS+ SSTAA+ SQK +GGL
Sbjct: 1 MAVPTIAFYTSPPSTICSSPHPCQINTHASCDLEFTSRSSSLASSTAAS--SQKPMVGGL 58
Query: 62 SCLFSSSS---------------EMGSYR---SEELKELSSSFGYAYSPSKLCGSSSSLK 103
S LFSS++ E+GS+R +ELKELSSSF YSP+K GS
Sbjct: 59 SSLFSSTAPRLSSSSASISSGGDELGSFRHDKGDELKELSSSF--RYSPNKFIGSF--FN 114
Query: 104 RDQSPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRN 163
RDQSPVSVFQGPVSC G S +R+ PP+ T RE++ + +FH G++ LF+GFVRN
Sbjct: 115 RDQSPVSVFQGPVSCGSCGFGSAART-PPLWTVRERSG-DGSFHGR-GGTNRLFSGFVRN 171
Query: 164 ALGSCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQL 223
ALGSCVDYDS V + L+VGSSA DELTFNMEDNI EGN E+YAK+ L +AQ
Sbjct: 172 ALGSCVDYDSPRLEVSSDG--LDVGSSALFGDELTFNMEDNITEGNSESYAKDLLLSAQS 229
Query: 224 KHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHD 283
KHKIF ++FV+KAF+EAE+AHRGQ+RASGDPYL HCVETA++LA +GANSTVVAAGLLHD
Sbjct: 230 KHKIFCDEFVVKAFFEAEKAHRGQLRASGDPYLEHCVETAVMLALVGANSTVVAAGLLHD 289
Query: 284 TLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA 343
T+DD+F+++DYI TFGA VADLVEGVSKLS LSKLARE++TA +TVEADRLHTMFLAMA
Sbjct: 290 TIDDSFVTHDYILGTFGAEVADLVEGVSKLSHLSKLAREHDTAERTVEADRLHTMFLAMA 349
Query: 344 DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFK 403
DARAVL+KLADRLHNMMTLDALP K+QRFAKET+EIFVPLANRLGI TWK QLEN+CFK
Sbjct: 350 DARAVLVKLADRLHNMMTLDALPPIKQQRFAKETMEIFVPLANRLGIYTWKEQLENMCFK 409
Query: 404 HLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
HLN +QH +LSSKL+ +DEA++ SA +KLE+ALKDK IS+ V+ GRHKS+YSIH KMLK
Sbjct: 410 HLNLEQHEDLSSKLLGLYDEAIIFSATQKLERALKDKGISYHVVTGRHKSVYSIHRKMLK 469
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVV 523
K LT++EIHDI+GLRLIVENEEDCY+ALR+VHQLW VPGK+KDYI++PK NGY V
Sbjct: 470 KNLTVNEIHDIHGLRLIVENEEDCYEALRIVHQLWPNVPGKLKDYISKPKLNGYQSIHTV 529
Query: 524 LSYERNILL 532
+ E ++ L
Sbjct: 530 VRGEGDVPL 538
>gi|37196706|dbj|BAC97801.1| RelA-SpoT like protein PsRSH1 [Pisum sativum]
Length = 729
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/553 (66%), Positives = 411/553 (74%), Gaps = 51/553 (9%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQ-KQTIGGLS 62
MAV TI+LYASPPSSVCSA HQI+ H +YDFD SRSS+ S+ A S+ K IGGLS
Sbjct: 1 MAVSTISLYASPPSSVCSAPHQISPHASYDFDFGSRSSSPASTATATASTSAKPMIGGLS 60
Query: 63 CLFSSS---------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-----QSP 108
CLFSSS S +ELKEL SSF +YSPSK GS KRD QSP
Sbjct: 61 CLFSSSVAMKHVPLASSFSGGDEDELKELGSSF--SYSPSKFGGS---WKRDYQNQIQSP 115
Query: 109 VSVFQGPVSC-SGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS 167
VSVFQ PVSC S G+ SRSS + G F GFVR ALGS
Sbjct: 116 VSVFQCPVSCGSSMGTVRSSRSS----------------------AGGFFEGFVRRALGS 153
Query: 168 -CVDYDSSSFRVHNGDAVLNVGSSA---ALIDELTFNMEDNIVEG----NLETYAKEFLA 219
C++YDS+ R+ G AL+DELTFN+ED +EG E YAK+ L
Sbjct: 154 SCLEYDSTGVRLRRGGGGGGEFDGGSSSALVDELTFNLEDTFIEGCFGFEFEPYAKKLLM 213
Query: 220 NAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAG 279
+AQL+HKIF E+FVIKAF EAE+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAG
Sbjct: 214 SAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAG 273
Query: 280 LLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMF 339
LLHDTLDDAFL+YDYIF FGAGVADLV GVSKLS LSKLAR+NNTASK+VEADRLHTMF
Sbjct: 274 LLHDTLDDAFLTYDYIFGMFGAGVADLVGGVSKLSHLSKLARDNNTASKSVEADRLHTMF 333
Query: 340 LAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLEN 399
LAMADARAVLIKLADRLHNMMTLDALP+ K+QRFAKETLEIF PLANRLGI+ WK QLEN
Sbjct: 334 LAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKEQLEN 393
Query: 400 LCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHC 459
LCFKHLNP QH ELSSKLVE +D+AM+ SAI +LEQALKD+ IS+ V+ GRHKSLYSI+C
Sbjct: 394 LCFKHLNPVQHMELSSKLVESYDDAMIASAINRLEQALKDEGISYHVISGRHKSLYSIYC 453
Query: 460 KMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIF 519
KMLKKKLT+D+IHDIYGLRLIVE EEDCY+AL+VVHQLW EVPGK+KDYI PKFNGY
Sbjct: 454 KMLKKKLTIDDIHDIYGLRLIVEKEEDCYKALKVVHQLWLEVPGKLKDYIRGPKFNGYQS 513
Query: 520 SQVVLSYERNILL 532
V+ E I L
Sbjct: 514 LHTVVMGEGKIPL 526
>gi|297834248|ref|XP_002885006.1| hypothetical protein ARALYDRAFT_897663 [Arabidopsis lyrata subsp.
lyrata]
gi|297330846|gb|EFH61265.1| hypothetical protein ARALYDRAFT_897663 [Arabidopsis lyrata subsp.
lyrata]
Length = 714
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/529 (65%), Positives = 404/529 (76%), Gaps = 53/529 (10%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLF-- 65
TIALYASPPSSVCS HQI+ D DL SRSS+++ S ++P QK +GGLS LF
Sbjct: 6 TIALYASPPSSVCSTPHQISC----DLDLTSRSSSTSPSMVSSP--QKPIVGGLSSLFSG 59
Query: 66 -------------SSSSEMGSYR---SEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSP 108
+ E S R S++LK+LS S + YSP+K +SS L+RD QSP
Sbjct: 60 ASVKSSASSCSYSTGVDEFSSVRYDRSDDLKDLSLSSSFCYSPAKFV-NSSYLRRDLQSP 118
Query: 109 VSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSC 168
+SV GPVSCS SPP+R +R++ N++ +F G+SGLFNGFVR ALGSC
Sbjct: 119 ISVLHGPVSCS---------CSPPMRMSRDR---NLD-GSFRLGASGLFNGFVRKALGSC 165
Query: 169 VDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIF 228
VDY+ +GS + L+DELTF MED + YA++ L AQL+HKIF
Sbjct: 166 VDYE--------------LGSDSVLVDELTFPMEDGFGVDTRKPYARDLLRRAQLRHKIF 211
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
+++ VIKAFYEAE+AHRGQMRASGDPYL HCVETAMLLA IGA+STVV AGLLHDT+DD+
Sbjct: 212 KDESVIKAFYEAEKAHRGQMRASGDPYLQHCVETAMLLANIGASSTVVVAGLLHDTMDDS 271
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAV 348
F+SYDYI R FGAGVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAV
Sbjct: 272 FMSYDYILRNFGAGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAV 331
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL AL K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+
Sbjct: 332 LIKLADRLHNMKTLYALSPVKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPN 391
Query: 409 QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
QH E+S+ L + FDEAM+TSAIEKLEQALK + IS+ VLCGRHKSLYSI+ KMLKKKLT+
Sbjct: 392 QHNEMSTMLEDSFDEAMITSAIEKLEQALKKEGISYHVLCGRHKSLYSIYSKMLKKKLTV 451
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEIHDI+GLRLIV+NE DCY+AL VVH LW+EVPGK+KDYIT PKFNGY
Sbjct: 452 DEIHDIHGLRLIVDNEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGY 500
>gi|145336732|ref|NP_564652.2| RELA/SPOT homolog 3 [Arabidopsis thaliana]
gi|4587556|gb|AAD25787.1|AC006577_23 Similar to gi|1653162 (p)ppGpp 3-pyrophosphohydrolase from
Synechocystis sp genome gb|D90911. EST gb|W43807 comes
from this gene [Arabidopsis thaliana]
gi|110742595|dbj|BAE99211.1| RSH3 [Arabidopsis thaliana]
gi|332194932|gb|AEE33053.1| RELA/SPOT homolog 3 [Arabidopsis thaliana]
Length = 715
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/529 (66%), Positives = 405/529 (76%), Gaps = 54/529 (10%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASP S+VCS HQINAH + D DLNSRSS+++SST++ TIGGLS LFS
Sbjct: 6 TIALYASPASTVCSTAHQINAHISCDLDLNSRSSSASSSTSSP------TIGGLSLLFSG 59
Query: 68 ----------------SSEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPVS 110
E+ S R + ++ + S + YSPSK GSS LKRD QSPVS
Sbjct: 60 ASVKSSSSSSSSHPSVGEELASIRHDRSEDRTLSGSFCYSPSKFIGSSY-LKRDHQSPVS 118
Query: 111 VFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFK-GSSGLFNGFVRNALGSCV 169
V GP+S SGN SPP+R +R++ N++ + + GSS LFNGFVR A+GSCV
Sbjct: 119 VLHGPIS-SGN--------SPPMRISRDR---NLDGGSALRVGSSRLFNGFVRKAIGSCV 166
Query: 170 DYDSSSFRVHNGDAVLNVGSSAALIDE-LTFNMEDNIVEGNLETYAKEFLANAQLKHKIF 228
DYD+ S L+DE L F M+D + YA++ L AQLKHKIF
Sbjct: 167 DYDTDS----------------VLVDEQLPFTMDDGFEGERRQPYARDLLRRAQLKHKIF 210
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
++ VIKAFYEAE+AHRGQMRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+
Sbjct: 211 EDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDS 270
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAV 348
F+SYDYI RTFG+GVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAV
Sbjct: 271 FMSYDYILRTFGSGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAV 330
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNMMTL ALP KRQRFAKETLEIF PLANRLGIS+WKV+LENLCFKHL+PD
Sbjct: 331 LIKLADRLHNMMTLYALPPVKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPD 390
Query: 409 QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
QH E+S L + FDEAM+TSAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTM
Sbjct: 391 QHHEMSDMLEDSFDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTM 450
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEIHDI+GLRLIV+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGY
Sbjct: 451 DEIHDIHGLRLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGY 499
>gi|297847822|ref|XP_002891792.1| hypothetical protein ARALYDRAFT_892466 [Arabidopsis lyrata subsp.
lyrata]
gi|297337634|gb|EFH68051.1| hypothetical protein ARALYDRAFT_892466 [Arabidopsis lyrata subsp.
lyrata]
Length = 715
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/531 (65%), Positives = 402/531 (75%), Gaps = 58/531 (10%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASP S+VCS HQINAH + D DLNSR+S+++SST + TIGGLS LFS
Sbjct: 6 TIALYASPASTVCSTAHQINAHVSCDLDLNSRTSSASSSTNSP------TIGGLSLLFSG 59
Query: 68 SS----------------EMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPVS 110
+S E+ S R + ++ + S + YSPSK GSS LKRD QSPVS
Sbjct: 60 ASVKSSSSSSSSHPTVGEELASIRHDRSEDRTLSGSFCYSPSKFIGSSY-LKRDHQSPVS 118
Query: 111 VFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFH---TFFKGSSGLFNGFVRNALGS 167
V GP+S SGN SPP+R +R++ NF + GSS LFNGFVR A+GS
Sbjct: 119 VLHGPIS-SGN--------SPPMRISRDR-----NFDGGSSLRVGSSRLFNGFVRKAIGS 164
Query: 168 CVDYDSSSFRVHNGDAVLNVGSSAALIDE-LTFNMEDNIVEGNLETYAKEFLANAQLKHK 226
CVDYD+ S L+DE L F M+D + YA++ L AQLKHK
Sbjct: 165 CVDYDTDS----------------VLVDEQLPFTMDDGFEGERKQPYARDLLRRAQLKHK 208
Query: 227 IFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
IF ++ VIKAFYEAE+AHRGQMRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLD
Sbjct: 209 IFEDESVIKAFYEAEKAHRGQMRANGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLD 268
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADAR 346
D+F+SYDYI RTFG+GVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADAR
Sbjct: 269 DSFMSYDYILRTFGSGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADAR 328
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
AVLIKLADRLHNMMTL ALP K+QRFAKETLEIF PLANRLGIS+WKV+LEN+CFKHL
Sbjct: 329 AVLIKLADRLHNMMTLYALPPVKQQRFAKETLEIFAPLANRLGISSWKVELENMCFKHLY 388
Query: 407 PDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
PDQH E+S L + F+EAM+TSAI KLEQALK + IS+ VL GRHKSLYSI+CKMLKKKL
Sbjct: 389 PDQHHEMSDMLEDSFNEAMITSAIGKLEQALKKEGISYHVLSGRHKSLYSIYCKMLKKKL 448
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
TMDEIHDI+GLRLIV+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGY
Sbjct: 449 TMDEIHDIHGLRLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGY 499
>gi|449480518|ref|XP_004155918.1| PREDICTED: uncharacterized LOC101204461 [Cucumis sativus]
Length = 734
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/535 (65%), Positives = 409/535 (76%), Gaps = 43/535 (8%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
M VPTIALYA PPSS+CS TH QINAH++ DF++ SR S+++S+ +A+ QK GGL
Sbjct: 1 MGVPTIALYAGPPSSICS-THPCQINAHSSLDFEIGSRPSSASSTASAS---QKSVAGGL 56
Query: 62 SCLFSSS---------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLK 103
SCLFS+S E+GS R EEL Y SSL
Sbjct: 57 SCLFSASPVRHVSSTTSFSGCGEELGSLWHDRGEELSSSFRYSSSKYL-------GSSLA 109
Query: 104 RDQSPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFK-GSSGLFNGFVR 162
RD SPVSVFQGPVSC +G S ++S PPI +REK+ + NF + GS+G FNGF+R
Sbjct: 110 RDSSPVSVFQGPVSCCSSGVGSTAKS-PPISISREKSGES-NFQSSIGVGSNGFFNGFLR 167
Query: 163 NALGSCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQ 222
NA GS +D VH L+V SSA L+DELTFN+ED E E YAK+ L AQ
Sbjct: 168 NASGSYLD-------VHRN--ALDVSSSAVLMDELTFNLEDGFGECTSEPYAKDMLLGAQ 218
Query: 223 LKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLH 282
++HKIF ++FVIKAFYEAE+AHRGQMRASGDPYL HCVETAMLLA IGANSTVVAAGLLH
Sbjct: 219 IRHKIFLDEFVIKAFYEAEKAHRGQMRASGDPYLQHCVETAMLLATIGANSTVVAAGLLH 278
Query: 283 DTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM 342
D LDD+F+ YDYI + GAGVADLVE VS+LS LSKLARENNTA+KTVEADRLHTMFLAM
Sbjct: 279 DALDDSFMCYDYILGSVGAGVADLVEEVSQLSHLSKLARENNTANKTVEADRLHTMFLAM 338
Query: 343 ADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCF 402
AD RAVL+KLADRLHNMMTLDALPL KR RFAKET+EIFVPLANRLGI +WK QLENLCF
Sbjct: 339 ADTRAVLVKLADRLHNMMTLDALPLTKRLRFAKETMEIFVPLANRLGILSWKEQLENLCF 398
Query: 403 KHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
KHL+P++H ELSSKLV+ FD +TSAIEKL+QALK++ IS+ +L GR+KSLYSI+ KML
Sbjct: 399 KHLHPEEHKELSSKLVDSFDSERITSAIEKLDQALKNEGISYHLLSGRNKSLYSIYLKML 458
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+KKLTMDEIHDI+G+RLIV+NEEDC +ALR+VHQLW+EVPG+ KDYI+RPKFNGY
Sbjct: 459 RKKLTMDEIHDIHGIRLIVKNEEDCQKALRIVHQLWSEVPGRCKDYISRPKFNGY 513
>gi|449447898|ref|XP_004141703.1| PREDICTED: uncharacterized protein LOC101204461 [Cucumis sativus]
Length = 738
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/535 (65%), Positives = 409/535 (76%), Gaps = 43/535 (8%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
M VPTIALYA PPSS+CS TH QINAH++ DF++ SR S+++S+ +A+ QK GGL
Sbjct: 1 MGVPTIALYAGPPSSICS-THPCQINAHSSLDFEIGSRPSSASSTASAS---QKSVAGGL 56
Query: 62 SCLFSSS---------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLK 103
SCLFS+S E+GS R EEL Y SSL
Sbjct: 57 SCLFSASPVRHVSSTTSFSGCGEELGSLWHDRGEELSSSFRYSSSKYL-------GSSLA 109
Query: 104 RDQSPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFK-GSSGLFNGFVR 162
RD SPVSVFQGPVSC +G S ++S PPI +REK+ + NF + GS+G FNGF+R
Sbjct: 110 RDSSPVSVFQGPVSCCSSGVGSTAKS-PPISISREKSGES-NFQSSIGVGSNGFFNGFLR 167
Query: 163 NALGSCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQ 222
NA GS +D VH L+V SSA L+DELTFN+ED E E YAK+ L AQ
Sbjct: 168 NASGSYLD-------VHRN--ALDVSSSAVLMDELTFNLEDGFGECTSEPYAKDMLLGAQ 218
Query: 223 LKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLH 282
++HKIF ++FVIKAFYEAE+AHRGQMRASGDPYL HCVETAMLLA IGANSTVVAAGLLH
Sbjct: 219 IRHKIFLDEFVIKAFYEAEKAHRGQMRASGDPYLQHCVETAMLLATIGANSTVVAAGLLH 278
Query: 283 DTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM 342
D LDD+F+ YDYI + GAGVADLVE VS+LS LSKLARENNTA+KTVEADRLHTMFLAM
Sbjct: 279 DALDDSFMCYDYILGSVGAGVADLVEEVSQLSHLSKLARENNTANKTVEADRLHTMFLAM 338
Query: 343 ADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCF 402
AD RAVL+KLADRLHNMMTLDALPL KR RFAKET+EIFVPLANRLGI +WK QLENLCF
Sbjct: 339 ADTRAVLVKLADRLHNMMTLDALPLTKRLRFAKETMEIFVPLANRLGILSWKEQLENLCF 398
Query: 403 KHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
KHL+P++H ELSSKLV+ FD +TSAIEKL+QALK++ IS+ +L GR+KSLYSI+ KML
Sbjct: 399 KHLHPEEHKELSSKLVDSFDSERITSAIEKLDQALKNEGISYHLLSGRNKSLYSIYLKML 458
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+KKLTMDEIHDI+G+RLIV+NEEDC +ALR+VHQLW+EVPG+ KDYI+RPKFNGY
Sbjct: 459 RKKLTMDEIHDIHGIRLIVKNEEDCQKALRIVHQLWSEVPGRCKDYISRPKFNGY 513
>gi|15231772|ref|NP_188021.1| RelA-SpoT like protein RSH2 [Arabidopsis thaliana]
gi|11994378|dbj|BAB02337.1| unnamed protein product [Arabidopsis thaliana]
gi|332641938|gb|AEE75459.1| RelA-SpoT like protein RSH2 [Arabidopsis thaliana]
Length = 709
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/530 (65%), Positives = 403/530 (76%), Gaps = 60/530 (11%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASPPSSVCS HQI+ D DL SRSS+++SS A++P QK +GGLS LFSS
Sbjct: 6 TIALYASPPSSVCSTPHQISC----DLDLTSRSSSTSSSMASSP--QKPIVGGLSSLFSS 59
Query: 68 S-------------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QS 107
+ S + RS++LK+LS S + YSP+K +S +RD QS
Sbjct: 60 ASVKSSSSSSCSYSTGVDEFSSLRYDRSDDLKDLSFSSSFGYSPAKFV---NSFRRDHQS 116
Query: 108 PVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS 167
P+SV GPVSCS SPP+R +R++ N++ +F G+SGLFNGFVR ALGS
Sbjct: 117 PISVLHGPVSCS---------CSPPMRMSRDR---NLD-GSFRLGASGLFNGFVRKALGS 163
Query: 168 CVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKI 227
CVDY+ GS + L+DELTF ME + ++ YA++ L AQL+HKI
Sbjct: 164 CVDYE--------------FGSDSVLVDELTFPMEVDTIK----PYARDLLRRAQLRHKI 205
Query: 228 FREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDD 287
F ++ VIKAFYEAE+AHRGQMRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD
Sbjct: 206 FNDESVIKAFYEAEKAHRGQMRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDD 265
Query: 288 AFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARA 347
+F+SYDYI R FGAGVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARA
Sbjct: 266 SFMSYDYILRNFGAGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARA 325
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
VLIKLADRLHNM TL AL K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P
Sbjct: 326 VLIKLADRLHNMKTLYALSPVKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYP 385
Query: 408 DQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+QH E+S+ L + FDEAM+TSAIEKLEQALK IS+ VLCGRHKSLYSI+ KMLKKKLT
Sbjct: 386 NQHNEMSTMLEDSFDEAMITSAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLT 445
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEIHDI+GLRLIV+NE DCY+AL VVH LW+EVPGK+KDYIT PKFNGY
Sbjct: 446 VDEIHDIHGLRLIVDNEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGY 495
>gi|7141308|gb|AAF37283.1|AF225704_1 RSH3 [Arabidopsis thaliana]
Length = 712
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/529 (65%), Positives = 402/529 (75%), Gaps = 57/529 (10%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASP S+VCS HQINAH + D DLNSRSS+++SST++ TIGGLS LFS
Sbjct: 6 TIALYASPASTVCSTAHQINAHISCDLDLNSRSSSASSSTSSP------TIGGLSLLFSG 59
Query: 68 ----------------SSEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPVS 110
E+ S R + ++ + S + YSPSK GSS LKRD QSPVS
Sbjct: 60 ASVKSSSSSSSSHPSVGEELASIRHDRSEDRTLSGSFCYSPSKFIGSSY-LKRDHQSPVS 118
Query: 111 VFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFK-GSSGLFNGFVRNALGSCV 169
V GP+S SGN SPP+R +R++ N++ + + GSS LFNGFVR A+GSCV
Sbjct: 119 VLHGPIS-SGN--------SPPMRISRDR---NLDGGSALRVGSSRLFNGFVRKAIGSCV 166
Query: 170 DYDSSSFRVHNGDAVLNVGSSAALIDE-LTFNMEDNIVEGNLETYAKEFLANAQLKHKIF 228
DYD+ S L+DE L F M+D + YA++ L AQLKHKIF
Sbjct: 167 DYDTDS----------------VLVDEQLPFTMDDGFEGERRQPYARDLLRRAQLKHKIF 210
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
++ VIKAFYEAE+AHRGQMRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+
Sbjct: 211 EDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDS 270
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAV 348
F+SYDYI RTFG+GVADLVEGVS QLSKLARENNTA KTVEADRLHTMFLAMADARAV
Sbjct: 271 FMSYDYILRTFGSGVADLVEGVS---QLSKLARENNTACKTVEADRLHTMFLAMADARAV 327
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNMMTL ALP KRQRFAKETLEIF PLANRLGIS+WKV+LENLCFKHL+PD
Sbjct: 328 LIKLADRLHNMMTLYALPPVKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPD 387
Query: 409 QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
QH E+S L + FDEAM+TSAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTM
Sbjct: 388 QHHEMSDMLEDSFDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTM 447
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEIHDI+GLRLIV+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGY
Sbjct: 448 DEIHDIHGLRLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGY 496
>gi|357514019|ref|XP_003627298.1| GTP pyrophosphokinase [Medicago truncatula]
gi|66947621|emb|CAJ00006.1| RelA-SpoT homolog 1 [Medicago truncatula]
gi|355521320|gb|AET01774.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 726
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 353/547 (64%), Positives = 409/547 (74%), Gaps = 43/547 (7%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPSSVCS HQIN YDF+L SRSS+ S+ A+ K +GGLSC
Sbjct: 1 MAVSTIALYASPPSSVCSTPHQIN----YDFELGSRSSSPASTAASTSG--KSVMGGLSC 54
Query: 64 LFSSS------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSV 111
LFSS S G +ELKELSSSF Y++SP+K GS KRD SPVSV
Sbjct: 55 LFSSPTVVKHVPFTSSFSGGGGGDEDELKELSSSFSYSFSPTKFGGS---WKRDHSPVSV 111
Query: 112 FQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS-CVD 170
FQ PVSCS + A G +GFVR+ALGS C+D
Sbjct: 112 FQCPVSCSSSIG----------------AGTGTVRSGRGSTGGGFLDGFVRSALGSSCLD 155
Query: 171 YDSSSFRVHNGDAVLNVGS-SAALIDELTFNMEDNIVEG----NLETYAKEFLANAQLKH 225
YDS+ R+ G + + ++DELTFN++D VEG +E YAK+ L NAQL+H
Sbjct: 156 YDSTGVRLRGGGGEFDGVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRH 215
Query: 226 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 285
KIF E+FVIKAF EAE+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+
Sbjct: 216 KIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTV 275
Query: 286 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADA 345
DDAFL+YDYI+ FGAGVADLVEGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADA
Sbjct: 276 DDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADA 335
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
RAVLIKLADRLHNMMTLDALP+ K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHL
Sbjct: 336 RAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHL 395
Query: 406 NPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
NP QH ELSSKLVE +D+AM+ SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LKKK
Sbjct: 396 NPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKK 455
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVLS 525
LT+D+IHDIYGLRLIV+ EEDCY+AL+VVH+LW+EV GK+KDYI PKFNGY V+
Sbjct: 456 LTIDDIHDIYGLRLIVDKEEDCYKALKVVHRLWSEVHGKLKDYIRFPKFNGYQSLHTVVM 515
Query: 526 YERNILL 532
E + L
Sbjct: 516 GEGKVPL 522
>gi|357514023|ref|XP_003627300.1| GTP pyrophosphokinase [Medicago truncatula]
gi|355521322|gb|AET01776.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 682
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 352/532 (66%), Positives = 407/532 (76%), Gaps = 43/532 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPSSVCS HQIN YDF+L SRSS+ S+ A+ K +GGLSC
Sbjct: 1 MAVSTIALYASPPSSVCSTPHQIN----YDFELGSRSSSPASTAASTSG--KSVMGGLSC 54
Query: 64 LFSSS------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSV 111
LFSS S G +ELKELSSSF Y++SP+K GS KRD SPVSV
Sbjct: 55 LFSSPTVVKHVPFTSSFSGGGGGDEDELKELSSSFSYSFSPTKFGGS---WKRDHSPVSV 111
Query: 112 FQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS-CVD 170
FQ PVSCS SS T ++ F +GFVR+ALGS C+D
Sbjct: 112 FQCPVSCS---------SSIGAGTGTVRSGRGSTGGGFL-------DGFVRSALGSSCLD 155
Query: 171 YDSSSFRVHNGDAVLNVGS-SAALIDELTFNMEDNIVEG----NLETYAKEFLANAQLKH 225
YDS+ R+ G + + ++DELTFN++D VEG +E YAK+ L NAQL+H
Sbjct: 156 YDSTGVRLRGGGGEFDGVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRH 215
Query: 226 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 285
KIF E+FVIKAF EAE+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+
Sbjct: 216 KIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTV 275
Query: 286 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADA 345
DDAFL+YDYI+ FGAGVADLVEGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADA
Sbjct: 276 DDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADA 335
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
RAVLIKLADRLHNMMTLDALP+ K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHL
Sbjct: 336 RAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHL 395
Query: 406 NPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
NP QH ELSSKLVE +D+AM+ SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LKKK
Sbjct: 396 NPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKK 455
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
LT+D+IHDIYGLRLIV+ EEDCY+AL+VVH+LW+EV GK+KDYI PKFNGY
Sbjct: 456 LTIDDIHDIYGLRLIVDKEEDCYKALKVVHRLWSEVHGKLKDYIRFPKFNGY 507
>gi|7141306|gb|AAF37282.1|AF225703_1 RSH2 [Arabidopsis thaliana]
Length = 710
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 345/530 (65%), Positives = 401/530 (75%), Gaps = 60/530 (11%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASPPSSVCS HQI+ D DL SRSS+++SS A++P QK +GGLS LFSS
Sbjct: 6 TIALYASPPSSVCSTPHQISC----DLDLTSRSSSTSSSMASSP--QKPIVGGLSSLFSS 59
Query: 68 S-------------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QS 107
+ S + RS++LK+LS S + YSP+K +S +RD QS
Sbjct: 60 ASVKSSSSSSCSYSTAVDEFSSLRYDRSDDLKDLSFSSSFGYSPAKFV---NSFRRDHQS 116
Query: 108 PVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS 167
P+SV GPVSCS SPP+R +R++ N++ +F G+S LFNGFVR ALGS
Sbjct: 117 PISVLHGPVSCS---------CSPPMRMSRDR---NLD-GSFRLGASRLFNGFVRKALGS 163
Query: 168 CVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKI 227
CVDY+ +GS + L+DELTF ME + ++ YA++ L AQL+HKI
Sbjct: 164 CVDYE--------------LGSDSGLVDELTFPMEVDTIK----PYARDLLRRAQLRHKI 205
Query: 228 FREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDD 287
F ++ VIKAFYEAE+AHRGQMRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD
Sbjct: 206 FNDESVIKAFYEAEKAHRGQMRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTVDD 265
Query: 288 AFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARA 347
+F+SYDYI R FGAGVADLVEGVSKLSQLSKLARENNTA KTVEADRLH MFLAMADARA
Sbjct: 266 SFMSYDYILRNFGAGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHPMFLAMADARA 325
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
VLIKLADRLHNM TL AL K+QRFAKETLEIF PLAN LGISTWKVQLENLCFKHL P
Sbjct: 326 VLIKLADRLHNMKTLYALSPVKQQRFAKETLEIFAPLANCLGISTWKVQLENLCFKHLYP 385
Query: 408 DQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+QH E+S+ L + FDEAM+TSAIEKL+QALK IS+ VLCGRHKSLYSI+ KMLKKKLT
Sbjct: 386 NQHNEMSTMLEDSFDEAMITSAIEKLDQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLT 445
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEIHDI+GLRLIV+NE DCY+AL VVH LW+EVPGK+KDYIT PKFNGY
Sbjct: 446 VDEIHDIHGLRLIVDNEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGY 495
>gi|157741797|gb|ABV69554.1| RelA/SpoT-like protein [Ipomoea nil]
Length = 727
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 351/542 (64%), Positives = 410/542 (75%), Gaps = 27/542 (4%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSV S + QIN+H ++DFD NSRSS+S S+T ++ SQK +GGL
Sbjct: 1 MAVPTIALYASPPSSVYSTPYSCQINSHASHDFDFNSRSSSSASTTTSS--SQKPAVGGL 58
Query: 62 SCLFSSSS-------EMGSYRSEELKELSSSFGY-AYSPSKLCGSSSSLKRDQ---SPVS 110
SCLFS+ S S +E+L L G S + SSSLKRDQ SP++
Sbjct: 59 SCLFSTQSVKHASSSSSFSSGTEDLGSLWHDRGEELSSSFRGSSLSSSLKRDQGHHSPMT 118
Query: 111 VFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSCVD 170
V QGP S +G+G SP R + +F++ GS GLFNGFVR+ALGSCVD
Sbjct: 119 VLQGPGSSNGSGGIGACSRSPSKR-------IGGDFYSSRSGSGGLFNGFVRHALGSCVD 171
Query: 171 YDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRE 230
YD + + + D+ + L+DELTFN++D + LE YAK+ L +AQ +HKIF +
Sbjct: 172 YDPVNLHLRDSDS-----APPGLLDELTFNIDDGFGDSKLEPYAKDLLLDAQARHKIFHD 226
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V+KAF EAE AHRGQMRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F+
Sbjct: 227 DLVVKAFCEAENAHRGQMRASGDPYLQHCVETAVLLATIGANSTVVAAGLLHDTLDDTFV 286
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLI 350
+Y+YI +FGAGVADLVEGVSKLS LSKLAREN+TA+K VEADRLHTMFLAMADARAVLI
Sbjct: 287 TYNYISLSFGAGVADLVEGVSKLSHLSKLARENDTANKIVEADRLHTMFLAMADARAVLI 346
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNMMTLD+LP+ K+QRFAKETLEIF PLANRLGISTWK QLENLCFK+LNP QH
Sbjct: 347 KLADRLHNMMTLDSLPMIKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKYLNPVQH 406
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
EL+SKLV FDEAMVTSA+EKLE+ALKD++IS+ L GRHKSLYSIH KM KKKL MDE
Sbjct: 407 KELTSKLVTSFDEAMVTSAVEKLERALKDESISYHSLSGRHKSLYSIHRKMSKKKLNMDE 466
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVLSYERNI 530
IHDI+GLR+IVENEEDCY+A VVHQLW EVPGK KDYI PKFNGY V++ E +
Sbjct: 467 IHDIHGLRIIVENEEDCYKAATVVHQLWPEVPGKFKDYILHPKFNGYQSLHTVVTREGMV 526
Query: 531 LL 532
L
Sbjct: 527 PL 528
>gi|28268682|dbj|BAC56909.1| RelA homolog [Suaeda japonica]
Length = 708
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 336/528 (63%), Positives = 392/528 (74%), Gaps = 54/528 (10%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTT-YDFDLNSRSSASTSSTAAAPSSQKQTIGG 60
MAV TIALYASPPSSVCS H IN+H+T YDFDL S S STSS +++ +SQ+ IGG
Sbjct: 1 MAVSTIALYASPPSSVCSTPHPCSINSHSTSYDFDL-SGRSPSTSSQSSSSTSQRPIIGG 59
Query: 61 LSCLFSSSSEMGSY----------RSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPV 109
LSCL SS + + LSSSF Y S SSSLKRD QSPV
Sbjct: 60 LSCLLKHSSSLATNDDFQKVGIDDHHHHYCNLSSSFRY----SNCSSLSSSLKRDIQSPV 115
Query: 110 SVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSCV 169
SV QGPVS S + + S S + R N+ L NGFVRN+LGSC+
Sbjct: 116 SVLQGPVSVSSSCNSVASGSFSGSNSFRVNNTTNL-----------LLNGFVRNSLGSCL 164
Query: 170 DYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFR 229
D+D ++ELTFNMED+ V G+ +E LA+AQ++HKIF
Sbjct: 165 DHD---------------------VEELTFNMEDHFVFGDA---VEELLASAQIRHKIFY 200
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+ FVIKAFYEAE+AHRGQ+RASG PYL HC+ETA+LLA+IGAN+TVVAAGLLHDT+DD+F
Sbjct: 201 DQFVIKAFYEAEKAHRGQVRASGHPYLHHCMETAVLLASIGANATVVAAGLLHDTIDDSF 260
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVL 349
++YDYI FG+GVADLV GVSKLS LSKLARENNTASKT+EADRLHTMFLAMADARAVL
Sbjct: 261 VTYDYILNIFGSGVADLVNGVSKLSHLSKLARENNTASKTIEADRLHTMFLAMADARAVL 320
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNMMTLDALP K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHL P+Q
Sbjct: 321 IKLADRLHNMMTLDALPSHKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLYPNQ 380
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+ ELSSKLV+ FD+A + SAI+KLE+ LKD+++S+ L GRHKSLYSIHCKM KKKLTMD
Sbjct: 381 YDELSSKLVKSFDQARIQSAIDKLEEGLKDEDLSYHDLSGRHKSLYSIHCKMSKKKLTMD 440
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+IHDI+GLRLIVENE+DC++AL+VVHQLW+EVPGK KDYI PK NGY
Sbjct: 441 QIHDIHGLRLIVENEDDCFRALKVVHQLWSEVPGKFKDYIHCPKCNGY 488
>gi|125563887|gb|EAZ09267.1| hypothetical protein OsI_31540 [Oryza sativa Indica Group]
Length = 533
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/551 (54%), Positives = 369/551 (66%), Gaps = 61/551 (11%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQ--TIGGL 61
M++P I+LY SPP ++ +FD +SR S+ STA +S + GGL
Sbjct: 1 MSLPAISLYTSPPPGAVYSS---------EFDPSSRGSSPPCSTAPPSTSHRPPAAAGGL 51
Query: 62 SCLFSSS------------SEMGSYRSEELKELS-SSFGYAYSPSKLCGSSSSLKRDQSP 108
SCLFSS E+G+ + E + + G YS S L SP
Sbjct: 52 SCLFSSPAAAASPPRAPPHDELGALWQDRSDEPAFAGGGGGYSSSPLKWRDLHHHHHHSP 111
Query: 109 VSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSC 168
VSVFQGP S + RE+ LF GFVRNALGSC
Sbjct: 112 VSVFQGPSSSPAASRSPPASWLAGRDRDRER----------------LFAGFVRNALGSC 155
Query: 169 VDYDSS-SFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKH 225
VDY + S R G EL F +++N+ E + E A+E LA AQ +H
Sbjct: 156 VDYAPALSPRSEVGGG------------ELAFELDENLAEASPACEPCARELLAGAQARH 203
Query: 226 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 285
+IF E+ V+KAF+EAE+AHRGQ RASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+
Sbjct: 204 RIFLEELVVKAFFEAEKAHRGQTRASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTI 263
Query: 286 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADA 345
DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADA
Sbjct: 264 DDSFIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADA 323
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
RAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGIS+WK QLENLCFKHL
Sbjct: 324 RAVLIKLADRVHNMKTLEALPLGKQQRFAKETMEIFVPLANRLGISSWKDQLENLCFKHL 383
Query: 406 NPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
NP++H +LSSKL + FDE ++TSA++KL++ L+D +S+ L GRHKSLYSIH KMLKK
Sbjct: 384 NPEEHKDLSSKLTKSFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKN 443
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY------IF 519
LTMDEIHDI+GLRL+ E EEDCY+AL VVH+LW +VPG+ KDYI+RPK NGY +
Sbjct: 444 LTMDEIHDIHGLRLVFEKEEDCYRALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVM 503
Query: 520 SQVVLSYERNI 530
S+ V +E I
Sbjct: 504 SENVHPFEVQI 514
>gi|297742998|emb|CBI35865.3| unnamed protein product [Vitis vinifera]
Length = 535
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/317 (83%), Positives = 286/317 (90%)
Query: 201 MEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCV 260
MEDN + N E + K+ L AQL+HKIF EDFV+KAFYEAERAHRGQMRASGDPYL HCV
Sbjct: 1 MEDNFPDSNSEPHVKDLLLGAQLRHKIFSEDFVVKAFYEAERAHRGQMRASGDPYLQHCV 60
Query: 261 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 320
ETA+LLA IGANSTVV +GLLHDTLDD+F+ YD IF TFGAGVADLVEGVSKLSQLSKLA
Sbjct: 61 ETAVLLAKIGANSTVVVSGLLHDTLDDSFMGYDDIFGTFGAGVADLVEGVSKLSQLSKLA 120
Query: 321 RENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 380
R+NNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL K+QRFAKETLEI
Sbjct: 121 RDNNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLGKQQRFAKETLEI 180
Query: 381 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDK 440
FVPLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV+ FDEAM+TSA EKLE ALKD+
Sbjct: 181 FVPLANRLGISTWKEQLENLCFKHLNPDQHKELSSKLVKSFDEAMITSAKEKLEPALKDE 240
Query: 441 NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAE 500
IS+ VL GRHKSLYSI+CKMLKK +TMDEIHDI+GLRLIVENEEDCY+AL VVH+LW+E
Sbjct: 241 AISYHVLSGRHKSLYSIYCKMLKKNMTMDEIHDIHGLRLIVENEEDCYKALGVVHRLWSE 300
Query: 501 VPGKMKDYITRPKFNGY 517
VPG+ KDYI KFNGY
Sbjct: 301 VPGRFKDYIKHSKFNGY 317
>gi|51535999|dbj|BAD38079.1| putative plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
Length = 708
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 301/551 (54%), Positives = 368/551 (66%), Gaps = 61/551 (11%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQ--TIGGL 61
M++P I+LY SPP ++ +FD +SR S+ STA +S + GGL
Sbjct: 1 MSLPAISLYTSPPPGAVYSS---------EFDPSSRGSSPPCSTAPPSTSHRPPAAAGGL 51
Query: 62 SCLFSSS------------SEMGSYRSEELKELS-SSFGYAYSPSKLCGSSSSLKRDQSP 108
SCLFSS E+G+ + E + + G YS S L SP
Sbjct: 52 SCLFSSPAAAASPPRAPPHDELGALWQDRSDEPAFAGGGGGYSSSPLKWRDLHHHHHHSP 111
Query: 109 VSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSC 168
VSVFQGP S + RE+ LF GFVRNALGSC
Sbjct: 112 VSVFQGPSSSPAASRSPPASWLAGRDRDRER----------------LFAGFVRNALGSC 155
Query: 169 VDYDSS-SFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKH 225
VDY + S R G EL F +++N+ E + E A+E LA AQ +H
Sbjct: 156 VDYAPALSPRSEVGGG------------ELAFELDENLAEASPACEPCARELLAGAQARH 203
Query: 226 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 285
+IF E+ V+K F+EAE+AHRGQ RASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+
Sbjct: 204 RIFHEELVVKTFFEAEKAHRGQTRASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTI 263
Query: 286 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADA 345
DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADA
Sbjct: 264 DDSFIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADA 323
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
RAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHL
Sbjct: 324 RAVLIKLADRVHNMKTLEALPLGKQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHL 383
Query: 406 NPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
NP++H +LSSKL + FDE ++TSA++KL++ L+D +S+ L GRHKSLYSIH KMLKK
Sbjct: 384 NPEEHKDLSSKLTKSFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKN 443
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY------IF 519
LTMDEIHDI+GLRL+ E EEDCY+AL VVH+LW +VPG+ KDYI+RPK NGY +
Sbjct: 444 LTMDEIHDIHGLRLVFEKEEDCYRALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVM 503
Query: 520 SQVVLSYERNI 530
S+ V +E I
Sbjct: 504 SENVHPFEVQI 514
>gi|357158631|ref|XP_003578190.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 708
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 296/552 (53%), Positives = 373/552 (67%), Gaps = 66/552 (11%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQ----TIG 59
M++ I+LY SPP +V S+ +FD + R S+ ++ P G
Sbjct: 1 MSLSAISLYTSPPGAVYSS----------EFDPSCRGSSPCTTATPPPPGTSHRPSAVAG 50
Query: 60 GLSCLFSSS------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQS 107
GLSCLFSS E+G+ + +LS Y++S S L S
Sbjct: 51 GLSCLFSSPAAAAAPPRAPAHDELGALWHDGSDDLSFGGSYSHSSSPLKRRDLHHHHHHS 110
Query: 108 PVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS 167
PVSVFQGP S + S S T RE+ LF+GFVRNALGS
Sbjct: 111 PVSVFQGPSSSPASRSPPAS-----WLTGRERER--------------LFSGFVRNALGS 151
Query: 168 CVDY-DSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLK 224
C+DY ++S R G EL F +++N+ E + E YA+E LA AQ +
Sbjct: 152 CIDYVPATSPRPELGGG------------ELAFELDENLPEASPACEPYARELLAGAQAR 199
Query: 225 HKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDT 284
H+IF E+ V++AF+EAE+AH GQ RASGDP+L HCVETA+LLA IGANSTVV+AGLLHDT
Sbjct: 200 HRIFHEELVVRAFFEAEKAHHGQTRASGDPFLQHCVETAVLLAKIGANSTVVSAGLLHDT 259
Query: 285 LDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD 344
+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+T EADRLHTM LAMAD
Sbjct: 260 IDDSFVDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMAD 319
Query: 345 ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKH 404
ARAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKH
Sbjct: 320 ARAVLIKLADRVHNMKTLEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKH 379
Query: 405 LNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
LNP+++TELSSKL E FDEA++TSA++ L++ L++ +S+ L GRHK+LYS++ KMLKK
Sbjct: 380 LNPEEYTELSSKLTETFDEALITSAVDTLDEGLREAGVSYRNLSGRHKNLYSVYSKMLKK 439
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY------I 518
LTMDE+HDI+GLRL+V+ EEDCYQAL VVH+LW +V G+ KDYI+RPK NGY +
Sbjct: 440 NLTMDEVHDIHGLRLVVDKEEDCYQALEVVHKLWPQVTGRFKDYISRPKLNGYRSLHTVV 499
Query: 519 FSQVVLSYERNI 530
S+ V +E I
Sbjct: 500 LSEGVHPFEVQI 511
>gi|357148012|ref|XP_003574588.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 711
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 302/539 (56%), Positives = 382/539 (70%), Gaps = 66/539 (12%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPS---SQKQTI-- 58
M+VPT+A+Y SPP + +++ + + +SR SA + TAA PS S + +
Sbjct: 1 MSVPTMAVYTSPPGGLYASS---------ELETSSRGSAPCA-TAAPPSPASSHRHSSFS 50
Query: 59 GGLSCLFSSSSEMGSYRSEELKELSSSF------------GYAYSPSKLCGSSSSLK-RD 105
GGLSCLFSS + + RS L EL + + G YS + SSSLK RD
Sbjct: 51 GGLSCLFSSPT--AAPRSSALDELGALWHDRSDEPAVAGRGGGYSCPQ---PSSSLKWRD 105
Query: 106 Q---SPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVR 162
SPVS+F P S + S S S +RE+ LF+ FVR
Sbjct: 106 HLHHSPVSLFHSPASSPASRSPSAS-----WLASRER--------------ERLFSSFVR 146
Query: 163 NALGSCVDYDSSSFRVHNGDAVLNVGSSAALID--ELTFNMEDNI--VEGNLETYAKEFL 218
NALGSCVDY + L V ++AA +D EL F +++N+ E + E YA++ L
Sbjct: 147 NALGSCVDYAPVT------SPALGV-TAAAGVDAAELAFELDENLSGAEPSCEPYARDLL 199
Query: 219 ANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAA 278
A AQ +H+IF ++ V+KAF+EAE+AHRGQ RASGDPYL HCVETA+LLA IGAN+TVV+A
Sbjct: 200 AGAQARHRIFHDELVVKAFFEAEKAHRGQTRASGDPYLQHCVETAVLLAKIGANATVVSA 259
Query: 279 GLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTM 338
GLLHDT+DD+F+ YD+IFR FGAGVADLVEGVSKLS LSKLAR+NNTAS+TVEADRLHTM
Sbjct: 260 GLLHDTIDDSFMDYDHIFRMFGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHTM 319
Query: 339 FLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 398
FLAMADARAVLIKLADRLHNM T++ALP K+QRFAKET+EIFVPLANRLGI++WK QLE
Sbjct: 320 FLAMADARAVLIKLADRLHNMKTIEALPFVKQQRFAKETMEIFVPLANRLGIASWKEQLE 379
Query: 399 NLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIH 458
N+CFKHLNP++H ELSSKLV FDEA++TS ++KL++ L+D+ IS+ + GRHKSLYSI+
Sbjct: 380 NICFKHLNPEEHKELSSKLVISFDEALLTSTLDKLDKGLRDEGISYHSVSGRHKSLYSIY 439
Query: 459 CKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
KM+KK LTMD++HDI+GLRL+VE E+DCY+AL +VH+LW V G+ KDYI PK NGY
Sbjct: 440 SKMIKKNLTMDDVHDIHGLRLVVETEKDCYRALDIVHKLWPGVSGRFKDYILHPKVNGY 498
>gi|357514021|ref|XP_003627299.1| GTP pyrophosphokinase [Medicago truncatula]
gi|355521321|gb|AET01775.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 467
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 312/481 (64%), Positives = 359/481 (74%), Gaps = 43/481 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPSSVCS HQIN YDF+L SRSS+ S+ A+ S K +GGLSC
Sbjct: 1 MAVSTIALYASPPSSVCSTPHQIN----YDFELGSRSSSPASTAAST--SGKSVMGGLSC 54
Query: 64 LFSSS------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSV 111
LFSS S G +ELKELSSSF Y++SP+K GS KRD SPVSV
Sbjct: 55 LFSSPTVVKHVPFTSSFSGGGGGDEDELKELSSSFSYSFSPTKFGGS---WKRDHSPVSV 111
Query: 112 FQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGS-CVD 170
FQ PVSCS SS T ++ F +GFVR+ALGS C+D
Sbjct: 112 FQCPVSCS---------SSIGAGTGTVRSGRGSTGGGFL-------DGFVRSALGSSCLD 155
Query: 171 YDSSSFRVHNGDAVLNVGS-SAALIDELTFNMEDNIVEG----NLETYAKEFLANAQLKH 225
YDS+ R+ G + + ++DELTFN++D VEG +E YAK+ L NAQL+H
Sbjct: 156 YDSTGVRLRGGGGEFDGVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRH 215
Query: 226 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 285
KIF E+FVIKAF EAE+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+
Sbjct: 216 KIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTV 275
Query: 286 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADA 345
DDAFL+YDYI+ FGAGVADLVEGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADA
Sbjct: 276 DDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADA 335
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
RAVLIKLADRLHNMMTLDALP+ K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHL
Sbjct: 336 RAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHL 395
Query: 406 NPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
NP QH ELSSKLVE +D+AM+ SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LK
Sbjct: 396 NPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKYV 455
Query: 466 L 466
L
Sbjct: 456 L 456
>gi|115476746|ref|NP_001061969.1| Os08g0457600 [Oryza sativa Japonica Group]
gi|33354141|dbj|BAC81140.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
gi|42408400|dbj|BAD09583.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
gi|113623938|dbj|BAF23883.1| Os08g0457600 [Oryza sativa Japonica Group]
gi|215694336|dbj|BAG89329.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704598|dbj|BAG94226.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201251|gb|EEC83678.1| hypothetical protein OsI_29472 [Oryza sativa Indica Group]
gi|222640676|gb|EEE68808.1| hypothetical protein OsJ_27564 [Oryza sativa Japonica Group]
Length = 718
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 297/540 (55%), Positives = 373/540 (69%), Gaps = 61/540 (11%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTI-GGLS 62
M+VP IA+Y SPP +V +++ + S A+ + + A S + Q I GGLS
Sbjct: 1 MSVPAIAVYTSPPGAVYTSSSSSELEASSR---GSAPCATAAPPSPASSHRHQAIAGGLS 57
Query: 63 CLFSSSS----------EMGSYRSEELKELSS------SFGYAYSPSKLCGSSSSLK-RD 105
CLFSS + E+G+ + E ++ GY+Y SS K RD
Sbjct: 58 CLFSSPTAAPRAAAAQDELGALWHDRSGEATAVGGGGGGGGYSYP-----QPSSPFKWRD 112
Query: 106 ---QSPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVR 162
SPV +F P S + S S S + RE+ LF+ FVR
Sbjct: 113 MLHHSPVPLFHSPASSPASRSPSASWLA-----GRER--------------ERLFSSFVR 153
Query: 163 NALGSCVDYDSSSFRVHNGDAVLNVGSSAAL---IDELTFNMEDNI--VEGNLETYAKEF 217
NALGSCVDY A L +G SAA+ EL F +++++ E + E YA++
Sbjct: 154 NALGSCVDYAPV--------AALPLGVSAAVGVGAGELAFELDEHLSEAEPSCEPYARDL 205
Query: 218 LANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVA 277
LA AQ +H+IF ++ V+KAF+EAERAHRGQ RASGDPYL HCVETA+LLA IGAN+TVV+
Sbjct: 206 LAGAQARHRIFHDELVVKAFFEAERAHRGQTRASGDPYLQHCVETAVLLAKIGANATVVS 265
Query: 278 AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHT 337
AGLLHDT+DD+F+ YD IFR FGAGVADLVEGVSKLS LSKLAR+NNTAS+TVEADRLHT
Sbjct: 266 AGLLHDTIDDSFMDYDQIFRMFGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHT 325
Query: 338 MFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 397
MFLAMADARAVLIKLADRLHNM T++ALPL K+QRFAKET+EIFVPLANRLGI++WK QL
Sbjct: 326 MFLAMADARAVLIKLADRLHNMKTIEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQL 385
Query: 398 ENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 457
EN+CFKHLNP++H ELSSKLV FDEA++TS ++KL++ L+D+ IS+ L GRHKSLYSI
Sbjct: 386 ENICFKHLNPEEHKELSSKLVISFDEALLTSTLDKLDKGLRDEGISYHSLSGRHKSLYSI 445
Query: 458 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ KM+KK LTMD++HDI+GLRL+V+ E+DCYQAL +VH+LW V G+ KDYI PK NGY
Sbjct: 446 YSKMIKKNLTMDDVHDIHGLRLVVDTEQDCYQALDIVHKLWPRVAGRFKDYILHPKLNGY 505
>gi|33354143|dbj|BAC81141.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
Length = 728
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/571 (52%), Positives = 368/571 (64%), Gaps = 81/571 (14%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQ--TIGGL 61
M++P I+LY SPP ++ +FD +SR S+ STA +S + GGL
Sbjct: 1 MSLPAISLYTSPPPGAVYSS---------EFDPSSRGSSPPCSTAPPSTSHRPPAAAGGL 51
Query: 62 SCLFSSS------------SEMGSYRSEELKELS-SSFGYAYSPSKLCGSSSSLKRDQSP 108
SCLFSS E+G+ + E + + G YS S L SP
Sbjct: 52 SCLFSSPAAAASPPRAPPHDELGALWQDRSDEPAFAGGGGGYSSSPLKWRDLHHHHHHSP 111
Query: 109 VSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFVRNALGSC 168
VSVFQGP S + RE+ LF GFVRNALGSC
Sbjct: 112 VSVFQGPSSSPAASRSPPASWLAGRDRDRER----------------LFAGFVRNALGSC 155
Query: 169 VDYDSS-SFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKH 225
VDY + S R G EL F +++N+ E + E A+E LA AQ +H
Sbjct: 156 VDYAPALSPRSEVGGG------------ELAFELDENLAEASPACEPCARELLAGAQARH 203
Query: 226 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV---------- 275
+IF E+ V+K F+EAE+AHRGQ RASGDPYL HCVETA+LLA IGANSTV
Sbjct: 204 RIFHEELVVKTFFEAEKAHRGQTRASGDPYLQHCVETAVLLANIGANSTVLQHCVETAVL 263
Query: 276 ----------VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNT 325
V+AGLLHDT+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNT
Sbjct: 264 LANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNT 323
Query: 326 ASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 385
AS+ VEADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLA
Sbjct: 324 ASRIVEADRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLGKQQRFAKETMEIFVPLA 383
Query: 386 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
NRLGI++WK QLENLCFKHLNP++H +LSSKL + FDE ++TSA++KL++ L+D +S+
Sbjct: 384 NRLGIASWKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITSAVDKLDRGLRDAGLSYH 443
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY+AL VVH+LW +VPG+
Sbjct: 444 NLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCYRALDVVHELWPQVPGRF 503
Query: 506 KDYITRPKFNGY------IFSQVVLSYERNI 530
KDYI+RPK NGY + S+ V +E I
Sbjct: 504 KDYISRPKLNGYRSLHTVVMSENVHPFEVQI 534
>gi|414870236|tpg|DAA48793.1| TPA: hypothetical protein ZEAMMB73_708443 [Zea mays]
Length = 713
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 294/541 (54%), Positives = 369/541 (68%), Gaps = 65/541 (12%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQ----TIG 59
M+VP IA+Y SPP +V + + + +SR SA ++ A+ + G
Sbjct: 1 MSVPAIAVYTSPPGAV---------YAPPELESSSRGSAPCAAAASPSAPSSHRHAAVAG 51
Query: 60 GLSCLFSSSSEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSVFQGPVSCS 119
GLSCLFSS S + R+ +EL + + R P SV
Sbjct: 52 GLSCLFSSPS--AAPRATAHEELGALWH---------------DRSDEPPSV----AGGF 90
Query: 120 GNGSYSYSRSSP---PIRTAREKADVNVNFHT-------------FFKGSSG--LFNGFV 161
G G YSY +SSP +R ++ V++ FHT + G LF+ FV
Sbjct: 91 GGGGYSYPQSSPSPLKLRDHLHRSPVSL-FHTPASSPASRSPSVSWLAGRERERLFSSFV 149
Query: 162 RNALGSCVDYDS-SSFRVHNGDAVLNVGSSAALID--ELTFNMEDNI--VEGNLETYAKE 216
RNALGSC+DY +SF L V +A +D EL F +++N+ E + E A E
Sbjct: 150 RNALGSCIDYAPVTSF-------PLGVRPAATGVDAAELAFELDENLSEAEPSCEPDAHE 202
Query: 217 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 276
LA AQ +H IFR++ V+KAF EAERAHRGQ RASGDPYL HCVETA+ LA IGAN+TVV
Sbjct: 203 LLAGAQARHHIFRDELVVKAFKEAERAHRGQKRASGDPYLQHCVETAVHLANIGANATVV 262
Query: 277 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 336
+AGLLHDT+DD+F+ YD+IFR FGAGVADLVEGVSKLS LSKLAR+NNTAS+TVEADRLH
Sbjct: 263 SAGLLHDTIDDSFMDYDHIFRMFGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLH 322
Query: 337 TMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQ 396
TMFLAMADARAVLIKLADRLHNM T++ALPL K+QRFAKET+EIFVPLANRLGI++WK
Sbjct: 323 TMFLAMADARAVLIKLADRLHNMNTIEALPLVKQQRFAKETMEIFVPLANRLGIASWKDH 382
Query: 397 LENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 456
LEN+CFKHLNP++H ELSSKL+ FDEA++TS + L+++L+D+ IS+ L GRHKSLYS
Sbjct: 383 LENICFKHLNPEEHKELSSKLLMSFDEALLTSTLHNLDKSLRDEGISYHSLSGRHKSLYS 442
Query: 457 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 516
I+ KM+KK LTMD++HDI+GLRL+VE EEDCY+AL +VH+LW V G+ KDYI PK NG
Sbjct: 443 IYSKMIKKNLTMDDVHDIHGLRLVVETEEDCYRALDIVHKLWPRVTGRFKDYICHPKLNG 502
Query: 517 Y 517
Y
Sbjct: 503 Y 503
>gi|347730539|gb|AEP20477.1| RelA/SpoT-like protein [Quercus suber]
Length = 506
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/291 (85%), Positives = 272/291 (93%)
Query: 227 IFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
IF EDFV+KAFYEAE+AHRGQMRASGDPYL HCVETA++LA IGANSTVVAAGLLHDTLD
Sbjct: 1 IFCEDFVVKAFYEAEKAHRGQMRASGDPYLQHCVETAVMLALIGANSTVVAAGLLHDTLD 60
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADAR 346
D+F++YDY+F TFGAGVADLVEGVSKLS LSKLAR+NNTA+KTVEADRLHTMFLAMADAR
Sbjct: 61 DSFMNYDYVFGTFGAGVADLVEGVSKLSHLSKLARDNNTANKTVEADRLHTMFLAMADAR 120
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
AVLIKLADRLHNMMTLDALP K+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHL+
Sbjct: 121 AVLIKLADRLHNMMTLDALPPAKQQRFAKETLEIFAPLANRLGISSWKDQLENLCFKHLH 180
Query: 407 PDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
PDQH ELSSKLVE FDEAM+TSA EKL+QALK K++S+ L GRHKSLYSI+ KMLKKKL
Sbjct: 181 PDQHEELSSKLVESFDEAMITSATEKLKQALKAKSVSYQDLSGRHKSLYSIYSKMLKKKL 240
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
TMDEIHDI+GLRLIV+NEEDCY+ALRVVHQLW EVPGK+KDYI+ PKFNGY
Sbjct: 241 TMDEIHDIHGLRLIVDNEEDCYKALRVVHQLWPEVPGKLKDYISHPKFNGY 291
>gi|125605857|gb|EAZ44893.1| hypothetical protein OsJ_29534 [Oryza sativa Japonica Group]
Length = 1130
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/384 (66%), Positives = 305/384 (79%), Gaps = 21/384 (5%)
Query: 156 LFNGFVRNALGSCVDYDSS-SFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LET 212
LF GFVRNALGSCVDY + S R G EL F +++N+ E + E
Sbjct: 565 LFAGFVRNALGSCVDYAPALSPRSEVGGG------------ELAFELDENLAEASPACEP 612
Query: 213 YAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGAN 272
A+E LA AQ +H+IF E+ V+K F+EAE+AHRGQ RASGDPYL HCVETA+LLA IGAN
Sbjct: 613 CARELLAGAQARHRIFHEELVVKTFFEAEKAHRGQTRASGDPYLQHCVETAVLLANIGAN 672
Query: 273 STVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEA 332
STVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+ VEA
Sbjct: 673 STVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRIVEA 732
Query: 333 DRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
DRLHTM LAMADARAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++
Sbjct: 733 DRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLGKQQRFAKETMEIFVPLANRLGIAS 792
Query: 393 WKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
WK QLENLCFKHLNP++H +LSSKL + FDE ++TSA++KL++ L+D +S+ L GRHK
Sbjct: 793 WKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHK 852
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
SLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY+AL VVH+LW +VPG+ KDYI+RP
Sbjct: 853 SLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCYRALDVVHELWPQVPGRFKDYISRP 912
Query: 513 KFNGY------IFSQVVLSYERNI 530
K NGY + S+ V +E I
Sbjct: 913 KLNGYRSLHTVVMSENVHPFEVQI 936
>gi|242044820|ref|XP_002460281.1| hypothetical protein SORBIDRAFT_02g025940 [Sorghum bicolor]
gi|241923658|gb|EER96802.1| hypothetical protein SORBIDRAFT_02g025940 [Sorghum bicolor]
Length = 712
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 300/557 (53%), Positives = 374/557 (67%), Gaps = 70/557 (12%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG--- 60
M++P I+LY SPP +V S+ +FD SR S+ +++ A P + +
Sbjct: 1 MSLPAISLYTSPPGAVYSS----------EFDPTSRGSSPSTTAAPPPPAASHRLPSGGG 50
Query: 61 ---LSCLFSSS------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSL 102
LSCLFSS ++G+ RS++L + + Y++S S L
Sbjct: 51 GGGLSCLFSSPAAAAAPPRAPAHDDLGALWHDRSDDLSVVGGGYSYSHSHSSSPLKRRDL 110
Query: 103 KRDQ-SPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGFV 161
+ SPVSVFQGP S S + S S AR++ LF GFV
Sbjct: 111 HHNHHSPVSVFQGPSSSSPSRSPPAS-----WLAARDR--------------DRLFAGFV 151
Query: 162 RNALGSCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLA 219
RNALGSCVDY S VG+ EL F +++N+ E E YA+E LA
Sbjct: 152 RNALGSCVDYAPPS------SPRPEVGAG-----ELAFELDENLAEAGPACEPYARELLA 200
Query: 220 NAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAG 279
+AQ +H+IF E+ V+KAF EAE+AHRGQ RASG+PYL HCVETA+LLA IGAN+TVV+AG
Sbjct: 201 SAQDRHRIFHEELVVKAFLEAEKAHRGQTRASGEPYLQHCVETAVLLAKIGANATVVSAG 260
Query: 280 LLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMF 339
LLHDT+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+TVEADRLHTM
Sbjct: 261 LLHDTIDDSFIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHTML 320
Query: 340 LAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLEN 399
LAMADARAVLIKLADRLHNM TL+AL L K+QRFAKET EIFVPLANRLGI++WK QLEN
Sbjct: 321 LAMADARAVLIKLADRLHNMKTLEALSLVKQQRFAKETKEIFVPLANRLGIASWKDQLEN 380
Query: 400 LCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHC 459
LCFK+LNP+++ ELSSKL E FDE ++TSA+ KL++ L+D +S+ L GRHKSLYSIH
Sbjct: 381 LCFKYLNPEEYKELSSKLTESFDEELITSAVGKLDKGLRDAGVSYHNLSGRHKSLYSIHS 440
Query: 460 KMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY-- 517
KMLKK LTM+EIHDI+GLRL+V+ EDCY+AL VVH+LW V G+ KDYI+RPK NGY
Sbjct: 441 KMLKKNLTMEEIHDIHGLRLVVDTVEDCYEALCVVHKLWPRVTGRFKDYISRPKLNGYRS 500
Query: 518 ----IFSQVVLSYERNI 530
+ S+ V +E I
Sbjct: 501 LHTVVMSEGVHPFEVQI 517
>gi|326506174|dbj|BAJ86405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 287/540 (53%), Positives = 366/540 (67%), Gaps = 63/540 (11%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG--- 60
M++ I+LY +PP + S++ ++ +FD SR S+ S+ A P +
Sbjct: 1 MSLSAISLYTTPPGAAYSSS------SSSEFDPGSRGSSPCSTAAPPPPAASHRPAAGAG 54
Query: 61 ---LSCLFSSS------------SEMGSYRSEELKELS-----SSFGYAYSPSKLCGSSS 100
LSCLFSS E+G+ + +LS GY++SPS L
Sbjct: 55 AGGLSCLFSSPAAAAAPPRAPAHDELGALWHDGSDDLSFGGGGGGGGYSHSPSPLKWRDI 114
Query: 101 SLKRDQSPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGF 160
SPVSVFQGP S + S S + T RE+ LF+GF
Sbjct: 115 HHHH-HSPVSVFQGPSSSPASRSPSSAS----WLTGRER--------------DRLFSGF 155
Query: 161 VRNALGSCVDY-DSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEF 217
VRNALGSC+DY ++S R G EL F +++N+ + E YA+E
Sbjct: 156 VRNALGSCIDYVPATSPRPEVGGG------------ELAFELDENLAGASPACEPYAQEL 203
Query: 218 LANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVA 277
LA AQ +H+IF E+ V+KAF+EAE+AH GQ RASGDP+L HCVETA+LLA IGA++TVV+
Sbjct: 204 LAGAQARHRIFHEELVVKAFFEAEKAHHGQTRASGDPFLQHCVETAVLLAKIGASATVVS 263
Query: 278 AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHT 337
AGLLHDT+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+T EADRLHT
Sbjct: 264 AGLLHDTIDDSFVDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRTAEADRLHT 323
Query: 338 MFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 397
M LAMADARAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QL
Sbjct: 324 MLLAMADARAVLIKLADRVHNMRTLEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQL 383
Query: 398 ENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 457
ENLCFKHLNP++H ELSSK E FDEA++TSA++ L++ L++ IS+ L GR+K+LYS+
Sbjct: 384 ENLCFKHLNPEEHKELSSKFAETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 443
Query: 458 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ KM KK LTMDE+HDI+GLRL+V+ EEDCY+AL VVH+LW +V G+ KDYI+ PK NGY
Sbjct: 444 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKDYISLPKLNGY 503
>gi|326503772|dbj|BAJ86392.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 287/540 (53%), Positives = 366/540 (67%), Gaps = 63/540 (11%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG--- 60
M++ I+LY +PP + S++ ++ +FD SR S+ S+ A P +
Sbjct: 1 MSLSAISLYTTPPGAAYSSS------SSSEFDPGSRGSSPCSTAAPPPPAASHRPAAGAG 54
Query: 61 ---LSCLFSSS------------SEMGSYRSEELKELS-----SSFGYAYSPSKLCGSSS 100
LSCLFSS E+G+ + +LS GY++SPS L
Sbjct: 55 AGGLSCLFSSPAAAAAPPRAPAHDELGALWHDGSDDLSFGGGGGGGGYSHSPSPLKWRDI 114
Query: 101 SLKRDQSPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGF 160
SPVSVFQGP S + S S + T RE+ LF+GF
Sbjct: 115 HHHH-HSPVSVFQGPSSSPASRSPSSAS----WLTGRER--------------DRLFSGF 155
Query: 161 VRNALGSCVDY-DSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEF 217
VRNALGSC+DY ++S R G EL F +++N+ + E YA+E
Sbjct: 156 VRNALGSCIDYVPATSPRPEVGGG------------ELAFELDENLAGASPACEPYAQEL 203
Query: 218 LANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVA 277
LA AQ +H+IF E+ V+KAF+EAE+AH GQ RASGDP+L HCVETA+LLA IGA++TVV+
Sbjct: 204 LAGAQARHRIFHEELVVKAFFEAEKAHHGQTRASGDPFLQHCVETAVLLAKIGASATVVS 263
Query: 278 AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHT 337
AGLLHDT+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+T EADRLHT
Sbjct: 264 AGLLHDTIDDSFVDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRTAEADRLHT 323
Query: 338 MFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 397
M LAMADARAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QL
Sbjct: 324 MLLAMADARAVLIKLADRVHNMRTLEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQL 383
Query: 398 ENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 457
ENLCFKHLNP++H ELSSK E FDEA++TSA++ L++ L++ IS+ L GR+K+LYS+
Sbjct: 384 ENLCFKHLNPEEHKELSSKFAETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 443
Query: 458 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ KM KK LTMDE+HDI+GLRL+V+ EEDCY+AL VVH+LW +V G+ KDYI+ PK NGY
Sbjct: 444 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKDYISLPKLNGY 503
>gi|326505464|dbj|BAJ95403.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 286/540 (52%), Positives = 365/540 (67%), Gaps = 63/540 (11%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG--- 60
M++ I+LY +PP + S++ ++ +FD SR S+ S+ A P +
Sbjct: 1 MSLSAISLYTTPPGAAYSSS------SSSEFDPGSRGSSPCSTAAPPPPAASHRPAAGAG 54
Query: 61 ---LSCLFSSS------------SEMGSYRSEELKELS-----SSFGYAYSPSKLCGSSS 100
LSCLFSS E+G+ + +LS GY++SPS L
Sbjct: 55 AGGLSCLFSSPAAAAAPPRAPAHDELGALWHDGSDDLSFGGGGGGGGYSHSPSPLKWRDI 114
Query: 101 SLKRDQSPVSVFQGPVSCSGNGSYSYSRSSPPIRTAREKADVNVNFHTFFKGSSGLFNGF 160
SPVSVFQGP S + S S + T RE+ LF+GF
Sbjct: 115 HHHH-HSPVSVFQGPSSSPASRSPSSAS----WLTGRER--------------DRLFSGF 155
Query: 161 VRNALGSCVDY-DSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEF 217
VRNALGSC+DY ++S R G EL F +++N+ + E YA+E
Sbjct: 156 VRNALGSCIDYVPATSPRPEVGGG------------ELAFELDENLAGASPACEPYAQEL 203
Query: 218 LANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVA 277
LA AQ + +IF E+ V+KAF+EAE+AH GQ RASGDP+L HCVETA+LLA IGA++TVV+
Sbjct: 204 LAGAQARRRIFHEELVVKAFFEAEKAHHGQTRASGDPFLQHCVETAVLLAKIGASATVVS 263
Query: 278 AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHT 337
AGLLHDT+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+T EADRLHT
Sbjct: 264 AGLLHDTIDDSFVDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRTAEADRLHT 323
Query: 338 MFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 397
M LAMADARAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QL
Sbjct: 324 MLLAMADARAVLIKLADRVHNMRTLEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQL 383
Query: 398 ENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 457
ENLCFKHLNP++H ELSSK E FDEA++TSA++ L++ L++ IS+ L GR+K+LYS+
Sbjct: 384 ENLCFKHLNPEEHKELSSKFAETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 443
Query: 458 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ KM KK LTMDE+HDI+GLRL+V+ EEDCY+AL VVH+LW +V G+ KDYI+ PK NGY
Sbjct: 444 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKDYISLPKLNGY 503
>gi|255560615|ref|XP_002521321.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
gi|223539399|gb|EEF40989.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
Length = 608
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/285 (84%), Positives = 259/285 (90%)
Query: 248 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 307
MRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD+FLSYDYIFRTFGAGVADLV
Sbjct: 120 MRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDSFLSYDYIFRTFGAGVADLV 179
Query: 308 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 367
EGVSKLS LSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TLDALPL
Sbjct: 180 EGVSKLSHLSKLARENNTADKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLDALPL 239
Query: 368 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 427
K+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHLNPD+H +L+S+LVE FDEA+VT
Sbjct: 240 VKQQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPDKHRDLASRLVESFDEAVVT 299
Query: 428 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 487
SA EKLEQALKD +IS+ VL GRHKSLYSI+CKMLKKKL MDEIHDI+GLRLIVENEEDC
Sbjct: 300 SATEKLEQALKDDDISYHVLSGRHKSLYSIYCKMLKKKLNMDEIHDIHGLRLIVENEEDC 359
Query: 488 YQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVLSYERNILL 532
Y+ALRVVHQLW+EVPGK KDYI+RPKFNGY V+ E + L
Sbjct: 360 YRALRVVHQLWSEVPGKFKDYISRPKFNGYQSLHTVVRAEGMVPL 404
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 90/124 (72%), Gaps = 20/124 (16%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAV TIALYASPPSSVCSA H QIN+H +YDFDLNSRSS++ SS+A++ +QK +GGL
Sbjct: 1 MAVSTIALYASPPSSVCSAPHPCQINSHGSYDFDLNSRSSSTASSSASS--TQKSIVGGL 58
Query: 62 SCLFSSSS-----------EMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQS 107
SCLFSSSS E+GS R +ELKELSSSF YSPSK G S +KRDQS
Sbjct: 59 SCLFSSSSVKHASFSGDREELGSLWHDRGDELKELSSSF--RYSPSKYLGGGSYIKRDQS 116
Query: 108 PVSV 111
P+S+
Sbjct: 117 PISM 120
>gi|115479395|ref|NP_001063291.1| Os09g0442600 [Oryza sativa Japonica Group]
gi|113631524|dbj|BAF25205.1| Os09g0442600, partial [Oryza sativa Japonica Group]
Length = 491
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/287 (72%), Positives = 246/287 (85%), Gaps = 6/287 (2%)
Query: 250 ASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 309
ASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVEG
Sbjct: 11 ASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVEG 70
Query: 310 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCK 369
VSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL K
Sbjct: 71 VSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLGK 130
Query: 370 RQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSA 429
+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H +LSSKL + FDE ++TSA
Sbjct: 131 QQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITSA 190
Query: 430 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 489
++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY+
Sbjct: 191 VDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCYR 250
Query: 490 ALRVVHQLWAEVPGKMKDYITRPKFNGY------IFSQVVLSYERNI 530
AL VVH+LW +VPG+ KDYI+RPK NGY + S+ V +E I
Sbjct: 251 ALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSENVHPFEVQI 297
>gi|242050856|ref|XP_002463172.1| hypothetical protein SORBIDRAFT_02g039080 [Sorghum bicolor]
gi|241926549|gb|EER99693.1| hypothetical protein SORBIDRAFT_02g039080 [Sorghum bicolor]
Length = 583
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/312 (64%), Positives = 240/312 (76%), Gaps = 1/312 (0%)
Query: 217 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 276
+A AQ +H IFR++ V +AF AE AHRGQ+RASGDPYL HCVETA LLA IGA VV
Sbjct: 88 LIAGAQSRHAIFRDELVRRAFAAAEAAHRGQVRASGDPYLQHCVETAALLAEIGAGPAVV 147
Query: 277 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 336
AAGLLHDT+DDA L Y +I FGAGVADLV+GVSKLS LSKLAR NNTAS+ EADRL
Sbjct: 148 AAGLLHDTVDDAGLGYGFISEHFGAGVADLVKGVSKLSHLSKLARRNNTASRIDEADRLR 207
Query: 337 TMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQ 396
+FLAM DARAVLIKLADRLHNM TLD+LP K+Q FAKETLEIF PLAN+LGI WK Q
Sbjct: 208 IVFLAMEDARAVLIKLADRLHNMRTLDSLPKNKQQSFAKETLEIFAPLANQLGILNWKEQ 267
Query: 397 LENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 456
LENLCFK+L PD+ ELS+ L E ++ M+ +A +LEQAL+ + +S+ + GRHKSLYS
Sbjct: 268 LENLCFKYLCPDKFDELSTSLTEFYNRDMIAAATRRLEQALQVRGLSYYAIYGRHKSLYS 327
Query: 457 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 516
I+ KM +KKL MDEI+DI+G+R+I+EN+ DC+ AL ++H LW +PGK KDYI PK N
Sbjct: 328 IYSKMARKKLVMDEIYDIHGVRVILENKADCFAALEIIHHLWPRIPGKFKDYINSPKPNR 387
Query: 517 YI-FSQVVLSYE 527
Y VVL+ E
Sbjct: 388 YQSLHTVVLTEE 399
>gi|414887563|tpg|DAA63577.1| TPA: hypothetical protein ZEAMMB73_929416 [Zea mays]
Length = 614
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/316 (60%), Positives = 238/316 (75%)
Query: 217 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 276
+A AQ +H IFR++ V +AF AE AHRGQ+RASGDPYL HCVETA LLA +GA VV
Sbjct: 120 LIAGAQSRHAIFRDELVRRAFTAAEAAHRGQVRASGDPYLQHCVETAALLAELGAGPAVV 179
Query: 277 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 336
AAGLLHDT+DDA L Y +I FGAGVADLV+GVS LS LSKLAR N+TAS+ EADRL
Sbjct: 180 AAGLLHDTVDDAGLGYGFISEHFGAGVADLVKGVSNLSHLSKLARRNDTASRIDEADRLR 239
Query: 337 TMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQ 396
+FLAM DARAVLIKLADRLHNM TLD+L K+Q AKETLEIF PLAN+LGI WK Q
Sbjct: 240 IVFLAMEDARAVLIKLADRLHNMRTLDSLSKTKQQSVAKETLEIFAPLANQLGILNWKEQ 299
Query: 397 LENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 456
LENLCFK+L P+ ELS+KL+E ++ M+ +A +LEQAL+ + +S+ + GRHKS+YS
Sbjct: 300 LENLCFKYLYPENFDELSTKLIEIYNIDMIAAATRRLEQALQVRGLSYYAIYGRHKSMYS 359
Query: 457 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 516
I+ KM +KKL MD+I+DI+G+R+I+EN+ DC+ L ++H LW +PGK KDYI PK N
Sbjct: 360 IYRKMARKKLVMDKIYDIHGVRVILENKADCFATLEIIHHLWPRIPGKFKDYINSPKPNR 419
Query: 517 YIFSQVVLSYERNILL 532
Y V+ E+ + L
Sbjct: 420 YQSLHTVVLTEQTLPL 435
>gi|24059853|dbj|BAC21321.1| putative RSH, disease resistance-related protein [Oryza sativa
Japonica Group]
Length = 589
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/306 (63%), Positives = 236/306 (77%), Gaps = 1/306 (0%)
Query: 222 QLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLL 281
Q +H IFR++ V +AFY AE AHRGQMRASGDPYL HCVETA LLA +GA VVAAGLL
Sbjct: 99 QSRHAIFRDELVRRAFYAAEAAHRGQMRASGDPYLQHCVETAALLAELGAGPAVVAAGLL 158
Query: 282 HDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA 341
HDT+DDA L Y + FGAGVADLV+GVS LS LSKLAR N+TAS+ EAD+L T+FLA
Sbjct: 159 HDTVDDAGLGYGSLSVQFGAGVADLVKGVSNLSHLSKLARRNDTASRVDEADKLRTVFLA 218
Query: 342 MADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLC 401
M DARAVLIKLADRLHNM TLD+LP K+Q FAKETLEIF PLAN+LGI WK QLENLC
Sbjct: 219 MEDARAVLIKLADRLHNMRTLDSLPKVKQQCFAKETLEIFAPLANQLGILNWKEQLENLC 278
Query: 402 FKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKM 461
FK+L P+ + ELSS L+E +++ M+ +AI +LEQAL+ + + + + GR+KS+YSI+ KM
Sbjct: 279 FKYLYPELYEELSSNLLEFYNQDMIAAAIRRLEQALQVRGLCYHTISGRNKSMYSIYSKM 338
Query: 462 LKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQ 521
KKL MDEI+DI+G+R+I++N+ DC+ L +VH LW +PGK KDYI PK N
Sbjct: 339 -AKKLDMDEIYDIHGVRVILDNKADCFTTLEIVHHLWPRIPGKFKDYINSPKPNYQSLHT 397
Query: 522 VVLSYE 527
VVLS E
Sbjct: 398 VVLSEE 403
>gi|302784096|ref|XP_002973820.1| hypothetical protein SELMODRAFT_100367 [Selaginella moellendorffii]
gi|300158152|gb|EFJ24775.1| hypothetical protein SELMODRAFT_100367 [Selaginella moellendorffii]
Length = 542
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 238/310 (76%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E L +AQ +HK+F++ F+IKAF AE AHRG R SG+ YL HCVETA+LLA+ GA +TV
Sbjct: 1 EILVDAQRRHKVFKDPFIIKAFRLAEEAHRGHFRRSGELYLTHCVETAILLASAGAEATV 60
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
VAAGLLHDTLDD+ + I FG VADLV GVSK+SQLS+LAR+NN ASKT+EADRL
Sbjct: 61 VAAGLLHDTLDDSSIDEAQIRAIFGDDVADLVVGVSKISQLSQLARDNNIASKTLEADRL 120
Query: 336 HTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 395
TMFLAM D R VLIKLADRLHNM TL+AL K+ R A ETLEI VP+ANRLGI +WK
Sbjct: 121 RTMFLAMVDVRVVLIKLADRLHNMRTLEALAAEKQNRIASETLEILVPIANRLGIWSWKA 180
Query: 396 QLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLY 455
++E+LCFK+LNP ++ EL++KL+EC +V SAIE+L++AL+ I LCGR K+L+
Sbjct: 181 EMEDLCFKYLNPTEYQELAAKLIECCRGGVVLSAIEQLDKALRKSKIKIEDLCGRSKTLF 240
Query: 456 SIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFN 515
SI+ KM KK ++DEI+D+ GLRLIV++E DCY+AL VH+LW +PGK+KDYI +PK N
Sbjct: 241 SIYTKMKKKGRSIDEIYDVRGLRLIVKDEADCYKALEFVHKLWDHIPGKLKDYIKQPKAN 300
Query: 516 GYIFSQVVLS 525
GY V+S
Sbjct: 301 GYQSLHTVVS 310
>gi|302803634|ref|XP_002983570.1| hypothetical protein SELMODRAFT_118606 [Selaginella moellendorffii]
gi|300148813|gb|EFJ15471.1| hypothetical protein SELMODRAFT_118606 [Selaginella moellendorffii]
Length = 540
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 237/310 (76%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E L +AQ +HK+F++ F+IKAF AE AHRG R SG+ YL HCVETA+LLA+ GA +TV
Sbjct: 1 EILVDAQRRHKVFKDPFIIKAFRLAEEAHRGHFRRSGELYLTHCVETAILLASAGAEATV 60
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
VAAGLLHDTLDD+ + I FG VADLV GVSK+SQLS+LAR+NN ASKT+EA RL
Sbjct: 61 VAAGLLHDTLDDSSIDEAQIRAIFGDDVADLVVGVSKISQLSQLARDNNIASKTLEAGRL 120
Query: 336 HTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 395
TMFLAM D R VLIKLADRLHNM TL+AL K+ R A ETLEI VP+ANRLGI +WK
Sbjct: 121 RTMFLAMVDVRVVLIKLADRLHNMRTLEALATEKQNRIASETLEILVPIANRLGIWSWKA 180
Query: 396 QLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLY 455
++E+LCFK+LNP ++ EL++KL+EC +V SAIE+L++AL+ I LCGR K+L+
Sbjct: 181 EMEDLCFKYLNPTEYQELAAKLIECCRGGVVLSAIEQLDKALRKSKIKIEDLCGRSKTLF 240
Query: 456 SIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFN 515
SI+ KM KK ++DEI+D+ GLRLIV++E DCY+AL VH+LW +PGK+KDYI +PK N
Sbjct: 241 SIYTKMKKKGRSIDEIYDVRGLRLIVKDEADCYKALEFVHKLWDHIPGKLKDYIKQPKAN 300
Query: 516 GYIFSQVVLS 525
GY V+S
Sbjct: 301 GYQSLHTVVS 310
>gi|110737342|dbj|BAF00616.1| putative GTP pyrophosphokinase [Arabidopsis thaliana]
Length = 216
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 193/216 (89%)
Query: 248 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 307
MRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FGAGVADLV
Sbjct: 1 MRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDDSFMSYDYILRNFGAGVADLV 60
Query: 308 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 367
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TL AL
Sbjct: 61 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLYALSP 120
Query: 368 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 427
K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L + FDEAM+T
Sbjct: 121 VKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSFDEAMIT 180
Query: 428 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
SAIEKLEQALK IS+ VLCGRHKSLYSI+ KMLK
Sbjct: 181 SAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLK 216
>gi|222637445|gb|EEE67577.1| hypothetical protein OsJ_25106 [Oryza sativa Japonica Group]
Length = 467
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 219/281 (77%), Gaps = 1/281 (0%)
Query: 248 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 307
MRASGDPYL HCVETA LLA +GA VVAAGLLHDT+DDA L Y + FGAGVADLV
Sbjct: 1 MRASGDPYLQHCVETAALLAELGAGPAVVAAGLLHDTVDDAGLGYGSLSVQFGAGVADLV 60
Query: 308 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 367
+GVS LS LSKLAR N+TAS+ EAD+L T+FLAM DARAVLIKLADRLHNM TLD+LP
Sbjct: 61 KGVSNLSHLSKLARRNDTASRVDEADKLRTVFLAMEDARAVLIKLADRLHNMRTLDSLPK 120
Query: 368 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 427
K+Q FAKETLEIF PLAN+LGI WK QLENLCFK+L P+ + ELSS L+E +++ M+
Sbjct: 121 VKQQCFAKETLEIFAPLANQLGILNWKEQLENLCFKYLYPELYEELSSNLLEFYNQDMIA 180
Query: 428 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 487
+AI +LEQAL+ + + + + GR+KS+YSI+ KM +KKL MDEI+DI+G+R+I++N+ DC
Sbjct: 181 AAIRRLEQALQVRGLCYHTISGRNKSMYSIYSKMARKKLDMDEIYDIHGVRVILDNKADC 240
Query: 488 YQALRVVHQLWAEVPGKMKDYITRPKFNGYI-FSQVVLSYE 527
+ L +VH LW +PGK KDYI PK NGY VVLS E
Sbjct: 241 FTTLEIVHHLWPRIPGKFKDYINSPKPNGYQSLHTVVLSEE 281
>gi|168004491|ref|XP_001754945.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694049|gb|EDQ80399.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/321 (54%), Positives = 227/321 (70%)
Query: 197 LTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYL 256
L E+ V+ + T A + L +AQ ++K+F + V+KAF AE AHRGQ R +GD +L
Sbjct: 12 LPVTTEEAKVKTSAGTSADDLLKSAQARYKVFCDPVVVKAFRMAEEAHRGQFRRNGDTFL 71
Query: 257 LHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQL 316
HCVETA++LAA G +TVVAAGLLHD +DD+ LS + G VA LV GVSKLS+
Sbjct: 72 SHCVETALILAATGVGNTVVAAGLLHDAIDDSNLSLQLLRGALGEDVASLVSGVSKLSEF 131
Query: 317 SKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKE 376
S+LAR++NT EAD L TM LAM D R VLIK+ADRLHN+ TL ALP K+ A E
Sbjct: 132 SQLARDSNTVRDPTEADSLRTMILAMVDVRVVLIKIADRLHNLRTLGALPYLKQIGIANE 191
Query: 377 TLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQA 436
TLEIF PLANRLGI +WK +LE+LCFK L P +H +LS++L E E +V S+I L+ A
Sbjct: 192 TLEIFAPLANRLGIWSWKAELEDLCFKCLKPVEHQDLSARLSERCREGLVMSSIRDLDDA 251
Query: 437 LKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQ 496
L+++ + F+ L GR K+LYSI+ KM+KKK T +EI D+ GLRLIV +E +CY+AL++VH+
Sbjct: 252 LRNEGVQFVDLSGRPKNLYSIYKKMMKKKRTPEEILDVRGLRLIVSDENNCYEALQIVHK 311
Query: 497 LWAEVPGKMKDYITRPKFNGY 517
LW +VPGK KDYI K NGY
Sbjct: 312 LWKQVPGKSKDYIAHSKPNGY 332
>gi|224111520|ref|XP_002332921.1| predicted protein [Populus trichocarpa]
gi|222872004|gb|EEF09135.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 168/204 (82%), Positives = 185/204 (90%), Gaps = 1/204 (0%)
Query: 314 SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRF 373
SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNM+TLDALPL K+QRF
Sbjct: 1 SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMITLDALPLVKQQRF 60
Query: 374 AKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKL 433
AKET++IF PLANRLGISTWK QLE LCFKHLNPDQH LS++LVE FDEAM+ SA EKL
Sbjct: 61 AKETMQIFAPLANRLGISTWKEQLETLCFKHLNPDQHRHLSARLVESFDEAMIASAKEKL 120
Query: 434 EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRV 493
++AL D+ IS+ L GRHKSLYSIHCKM KKKL MD+IHDI+GLRLIVEN+EDCY+ALRV
Sbjct: 121 DKALTDEAISY-NLHGRHKSLYSIHCKMSKKKLNMDQIHDIHGLRLIVENKEDCYRALRV 179
Query: 494 VHQLWAEVPGKMKDYITRPKFNGY 517
VH LW+EVPG+ KDYIT PKFNGY
Sbjct: 180 VHCLWSEVPGQFKDYITNPKFNGY 203
>gi|168052096|ref|XP_001778487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670085|gb|EDQ56660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 219/304 (72%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A E L +AQ ++K F + V+KAF AE AH+GQ R +GD +L HCVETA++LAA G +
Sbjct: 14 ADELLRSAQARYKAFYDPIVVKAFRMAEEAHKGQFRRNGDMFLAHCVETALILAATGVGN 73
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
VVAAGLLHD +DD+ LS + + + G VA LV GVSKLS+ S+LAR+ NT T+EAD
Sbjct: 74 IVVAAGLLHDAIDDSNLSLELLRCSLGENVASLVIGVSKLSEFSQLARDCNTVCDTLEAD 133
Query: 334 RLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 393
RL TM LAM D R VLIK+ADRLHN+ TL+ALP K+ AKETLEIF PLANRLGI +W
Sbjct: 134 RLRTMILAMVDVRVVLIKIADRLHNLRTLEALPSHKQIGIAKETLEIFAPLANRLGIWSW 193
Query: 394 KVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKS 453
K ++E+LCFK L P H LS +L E E +V S+I L++AL+ + F+ LCGR K+
Sbjct: 194 KAEMEDLCFKCLKPVDHENLSIRLSERCREGLVMSSIRDLDEALRVGGVQFIDLCGRPKN 253
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
LYS++ KM+KKK + DEI D+ GLRLIV +EE CYQAL VVHQLW +PGK KDYI K
Sbjct: 254 LYSVYKKMMKKKRSPDEILDVRGLRLIVTDEESCYQALEVVHQLWRCIPGKTKDYIVDSK 313
Query: 514 FNGY 517
NGY
Sbjct: 314 PNGY 317
>gi|168066267|ref|XP_001785062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663355|gb|EDQ50123.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 627
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 169/312 (54%), Positives = 223/312 (71%), Gaps = 2/312 (0%)
Query: 206 VEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAML 265
VE + T A E L AQ + +F + V+KAF AE AHRGQ+R +GD +L HCVETA+
Sbjct: 89 VETSTATTADEILKGAQDRFNVFYDPVVVKAFRMAEEAHRGQVRRNGDMFLSHCVETALT 148
Query: 266 LAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNT 325
LAAIG ++TV+AAGLLHD +DD+ + T G VA+LV GVSKLS+ S+LAR++NT
Sbjct: 149 LAAIGVSNTVIAAGLLHDAIDDSNFCLKRLRDTLGEDVANLVIGVSKLSEFSQLARDSNT 208
Query: 326 ASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 385
+EADRL TM LA+ D R VL+K+ADRLHN+ TL+ALP K+ A ETL IF PLA
Sbjct: 209 VGNPMEADRLRTMILALVDVRVVLVKIADRLHNLRTLEALPSHKQIGIATETLGIFAPLA 268
Query: 386 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
NRLGI WK +LE+LCFK+L P+ H +LS +L E E +V S+I+ L++AL+ + + F+
Sbjct: 269 NRLGIWRWKAELEDLCFKYLKPEDHQDLSMRLSERCREGLVMSSIKNLDEALRIRGVEFI 328
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
LCGR K+LYS++ KM+KKK +++EI D+ GLRLIV +E CY+AL +VHQL +PGK
Sbjct: 329 DLCGRPKNLYSVYKKMMKKKRSLEEILDVIGLRLIVSDENSCYEALEIVHQLC--MPGKS 386
Query: 506 KDYITRPKFNGY 517
KDYI K NGY
Sbjct: 387 KDYIVDSKPNGY 398
>gi|414885657|tpg|DAA61671.1| TPA: hypothetical protein ZEAMMB73_267567 [Zea mays]
Length = 404
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/199 (67%), Positives = 164/199 (82%), Gaps = 6/199 (3%)
Query: 338 MFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 397
M LAMADARAVLIKLADRLHNM TL ALP K++RFAKET+EIFVPLANRLG+++WK QL
Sbjct: 1 MLLAMADARAVLIKLADRLHNMETLKALPCAKQERFAKETMEIFVPLANRLGVASWKDQL 60
Query: 398 ENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 457
ENLCFK+LNP++H ELSSKL E FDE ++TSA++KL++ L+D +S+ L GRHKSLYSI
Sbjct: 61 ENLCFKYLNPEEHEELSSKLRESFDEELITSAVDKLDKGLRDAGVSYHSLSGRHKSLYSI 120
Query: 458 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HCKMLKK LTM+EIHDI+GLRL+VE+EEDCY+AL VVH+LW V G+ KDYI+RPK NGY
Sbjct: 121 HCKMLKKNLTMEEIHDIHGLRLLVESEEDCYEALCVVHRLWPRVTGRFKDYISRPKLNGY 180
Query: 518 ------IFSQVVLSYERNI 530
+ S+ V +E I
Sbjct: 181 RSLHTVVMSEGVHPFEVQI 199
>gi|154269268|gb|ABS72194.1| RSH2, partial [Corchorus olitorius]
Length = 239
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/163 (76%), Positives = 140/163 (85%)
Query: 370 RQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSA 429
+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHLNPDQH ELSS+LV FDEAM+TSA
Sbjct: 1 QQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPDQHKELSSRLVNSFDEAMITSA 60
Query: 430 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 489
IEKLE+ALKDK I + VL GRHKSLY I+ KMLKKKL MDEIHDI+GLR+IVENEEDCY+
Sbjct: 61 IEKLERALKDKEIPYHVLSGRHKSLYGIYSKMLKKKLAMDEIHDIHGLRIIVENEEDCYE 120
Query: 490 ALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVLSYERNILL 532
ALRVVHQLW+EVPGK+KDYI+ PKFNGY V+ E + L
Sbjct: 121 ALRVVHQLWSEVPGKLKDYISHPKFNGYQSLHTVVKGEGTVPL 163
>gi|435854533|ref|YP_007315852.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
gi|433670944|gb|AGB41759.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
Length = 722
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 190/290 (65%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V K +Y A+ AH+GQMR SG+P+L H + A +LA + + + A LLHD ++D +
Sbjct: 20 DLVKKGYYLAKEAHQGQMRVSGEPFLSHPLRVAQILAELELDVVSITAALLHDVVEDTEI 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D I FGA + LV GV+KL+++ RE + A+ L MFLAMA D R VL
Sbjct: 80 TADEIEEEFGAEIRLLVNGVTKLNKIDFKTREEHQAAS------LRKMFLAMAEDIRVVL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ L KR+R A ETLEI+ PLA+RLG+S K +LE+L F++L PD+
Sbjct: 134 IKLADRLHNMRTLNYLSEEKRKRKANETLEIYAPLAHRLGMSRLKWELEDLSFRYLEPDK 193
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL++KL + EA + I+ LE L+D +I + GR K LYSI+ K++ K +
Sbjct: 194 YHELANKLAKNRAEREAYIEDVIDTLEGKLEDVDIQGKI-YGRPKHLYSINQKIINKNKS 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ LR+IV++ ++CYQ L ++H++W +PG++KDYI PK N Y
Sbjct: 253 FDEIYDLTALRVIVDSVKECYQVLGILHEIWNPMPGRIKDYIAMPKSNMY 302
>gi|255085290|ref|XP_002505076.1| predicted protein [Micromonas sp. RCC299]
gi|226520345|gb|ACO66334.1| predicted protein [Micromonas sp. RCC299]
Length = 736
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 192/319 (60%), Gaps = 5/319 (1%)
Query: 204 NIVEGNLETYAKE---FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCV 260
++ G LE + L AQ +H F V+ AF A AHRGQ+R SGD L V
Sbjct: 119 GLLSGRLEALTADEEAMLLAAQARHDAFSSPAVVSAFRVAAAAHRGQLRKSGDSVLSAQV 178
Query: 261 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 320
TA+++A +G +S VVA LLHD LDD ++ + T + +V GVSKLS +S+L
Sbjct: 179 GTALIVAELGMDSKVVATALLHDVLDDTPVTERELRNTTPDSIVTMVTGVSKLSLVSQLQ 238
Query: 321 RENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 380
R + + E +L + +AM D R V++KLADRL + T+ AL R A+ETL I
Sbjct: 239 RSSGRSLAREERLKLRALLVAMTDVRVVIVKLADRLQCLETIHALGEDTATRIAQETLSI 298
Query: 381 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQAL-KD 439
+VPLA+RLGI + K +LE+ CF +L+P+ H LS++L +A V A+E + L D
Sbjct: 299 YVPLASRLGIWSLKTRLEDACFAYLHPEAHASLSAELARDEQKAAVQRAVEDITSTLVAD 358
Query: 440 KNISFL-VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 498
IS + + GR KSL+S+H KML+K + + ++HD+ +R+IV++E+DCY AL +H +
Sbjct: 359 AGISDVHDIYGRAKSLFSVHRKMLRKGIALGDVHDLRAVRVIVDSEDDCYAALEAIHGKF 418
Query: 499 AEVPGKMKDYITRPKFNGY 517
A VPGK KDY+ K NGY
Sbjct: 419 APVPGKTKDYVRNAKVNGY 437
>gi|206901091|ref|YP_002250691.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
gi|206740194|gb|ACI19252.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
Length = 727
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 184/286 (64%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KAF AE AH+GQMR SG+PY+ H VE A +L +G TV+ AGLLHD L+D + +
Sbjct: 26 KAFIFAENAHKGQMRKSGEPYITHPVEVAKILMDLGMEETVIIAGLLHDVLEDTKVPKEE 85
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I + FG V LVE ++KL +LS ++ A L MF+AMA D R ++IKLA
Sbjct: 86 IEKEFGKDVLSLVEAITKLEKLS------FYPTEAYRAQNLRKMFIAMAKDIRVIIIKLA 139
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL K++R AKETLEI+ PLA+RLG+ K +LE+L F++L P+++ +
Sbjct: 140 DRLHNMQTLQYHDEEKQKRIAKETLEIYAPLAHRLGVWDIKWRLEDLAFRYLEPEKYHYV 199
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ K+ E E + AIE +++ LK I+ V GR K LYSI+ KML++ + ++E+
Sbjct: 200 AKKVAETRKEREKFIEKAIEIIKEELKKTGINAEV-TGRAKHLYSIYQKMLRRGIEIEEM 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R+IV +E++CY+ L ++H LW VPG+ KDYI K N Y
Sbjct: 259 YDLLGVRVIVNSEKECYEVLGIIHNLWKPVPGRFKDYIANKKSNNY 304
>gi|313672627|ref|YP_004050738.1| (p)ppGpp synthetase I SpoT/RelA [Calditerrivibrio nitroreducens DSM
19672]
gi|312939383|gb|ADR18575.1| (p)ppGpp synthetase I, SpoT/RelA [Calditerrivibrio nitroreducens
DSM 19672]
Length = 710
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 182/286 (63%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A + HRGQ+R SG+PYL H + A++LA + + V AG+LHDTL+D +Y+
Sbjct: 29 KAYVYAAQKHRGQLRKSGEPYLSHPLNVALILANMNMDLDTVTAGILHDTLEDTDATYEE 88
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GVSK+ ++S + E A + M ++M+ D R ++IKLA
Sbjct: 89 LAELFGEDVAFLVDGVSKIGKISFKSSEEKMA------ENFRKMLISMSKDVRVIVIKLA 142
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TLD L K+QR AKET+EI+ PLA+RLGI+ K +LE+L F+ LNPD++ E+
Sbjct: 143 DRLHNMRTLDYLSEEKKQRIAKETMEIYAPLAHRLGIAWIKWELEDLSFRILNPDKYYEI 202
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ KL EA + I L+ LK+ NI V GR K YSI+ KM+KKK + DEI
Sbjct: 203 YNLVKLKRSEREAYLNQVINLLDAHLKNVNIQAEV-TGRPKHFYSIYSKMIKKKTSFDEI 261
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ +R+IV+ DCY L ++H LW +PG+ KDYI PK N Y
Sbjct: 262 YDLLAVRVIVKTVSDCYATLGIIHNLWKPIPGRFKDYIAMPKANMY 307
>gi|217967359|ref|YP_002352865.1| (p)ppGpp synthetase I SpoT/RelA [Dictyoglomus turgidum DSM 6724]
gi|217336458|gb|ACK42251.1| (p)ppGpp synthetase I, SpoT/RelA [Dictyoglomus turgidum DSM 6724]
Length = 727
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 184/286 (64%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF AE AH+GQ+R SG+PY+ H VE A +L +G TVV AGLLHD L+D ++ +
Sbjct: 26 RAFIFAENAHKGQVRKSGEPYITHPVEVAKILMNLGMEETVVIAGLLHDVLEDTNVTKEE 85
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I + FG V LVE ++KL +LS E A L MF+AMA D R ++IKLA
Sbjct: 86 IEKEFGKDVLSLVEAITKLEKLSFYPTE------AYRAQNLRKMFIAMAKDIRVIIIKLA 139
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL K++R AKETLEI+ PLA+RLG+ K +LE+L F++L P+++ +
Sbjct: 140 DRLHNMQTLQYHEEEKQKRIAKETLEIYAPLAHRLGVWDIKWRLEDLAFRYLEPEKYHYV 199
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ K+ E E + AIE +++ LK I+ V GR K LYSI+ KML++ + ++E+
Sbjct: 200 AKKVAETRKEREKFIEKAIEIIKEELKKAGINAEV-TGRAKHLYSIYQKMLRRGIEIEEM 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R+IV +E++CY+ L ++H LW VPG+ KDYI K N Y
Sbjct: 259 YDLLGVRVIVNSEKECYEVLGIIHNLWKPVPGRFKDYIANKKSNNY 304
>gi|159902750|ref|YP_001550094.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. MIT 9211]
gi|159887926|gb|ABX08140.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9211]
Length = 776
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 178/291 (61%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + AF A R H+GQ RASGDPY++H V A LL IGA TV+AAGLLHD ++D
Sbjct: 66 EALIANAFDLAFRLHKGQFRASGDPYIVHPVAVADLLQEIGAGPTVIAAGLLHDAIEDTD 125
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
L+ + + FG VA LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 126 LTLEQLQSFFGNEVAGLVEGVTKLGGI------HVTNRTEAQAENLRKMFLAMASDIRVV 179
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD+L K+QR A ET EI+ PLANRLGI +K +LE+L FK L PD
Sbjct: 180 LVKLADRLHNMRTLDSLQSDKQQRIALETREIYAPLANRLGIGRFKWELEDLAFKLLEPD 239
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ E+ ++V E + IE L L ++ + GR K L+ I KM +++
Sbjct: 240 SYREIQQEVVTKRSEREKRLDKTIELLRTKLLAAGLTEYEINGRPKHLFGIWGKMERQQK 299
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI LR+IV N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 300 EFHEIYDIAALRIIVPNLETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|428208449|ref|YP_007092802.1| (p)ppGpp synthetase I SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
gi|428010370|gb|AFY88933.1| (p)ppGpp synthetase I, SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
Length = 763
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/289 (44%), Positives = 184/289 (63%), Gaps = 7/289 (2%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H+GQ R SG+PY+ H V A LL +G S ++AAG LHD ++D ++
Sbjct: 44 LICRAFNFAYQLHQGQYRKSGEPYICHPVAVAGLLRDLGGGSAMIAAGFLHDVVEDTDVT 103
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FGA V LVEGV+KLS+ S E ++ +A+ MFLAMA D R +++
Sbjct: 104 LEDIEQQFGAEVKHLVEGVTKLSKFS----ETFSSKTERQAENFRRMFLAMAQDIRVIVV 159
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ LP KR+R A ET EIF PLANRLGI T+K +LE+L FK+L P+ +
Sbjct: 160 KLADRLHNMRTLEHLPDEKRRRIALETREIFAPLANRLGIGTFKWELEDLTFKYLEPEAY 219
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++ + E EA +T IE L+Q + +I + + GR K LY I+ KM +++
Sbjct: 220 RQIQDLVAEKRTDREARLTRVIEVLQQGMAQSHIQCIDISGRPKHLYGIYQKMQRQQKEF 279
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV+ E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 280 HEIYDLAAIRIIVKTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 328
>gi|397906545|ref|ZP_10507345.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
gi|397160502|emb|CCJ34682.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
Length = 722
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 132/294 (44%), Positives = 186/294 (63%), Gaps = 18/294 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ AE+AH GQ+R SGDPY+LH VE A++L +G ++ + A LLHD ++D L
Sbjct: 19 EMIKKAYNVAEKAHEGQLRESGDPYILHPVEVAIILVEMGLDTDAICAALLHDVVEDTHL 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SY+ + R F +ADLV+GV+KL ++ ++E +A+ + + +AMA D R +L
Sbjct: 79 SYEDVKREFNESIADLVDGVTKLGKIEYKSKEEQ------QAENIRKVLIAMAKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++ A+ETL+I+ PLA+RLGIS K +LE+L ++L+PD+
Sbjct: 133 IKLADRLHNMRTLKYLPPEKQKAKAEETLDIYAPLAHRLGISKIKWELEDLSLRYLHPDE 192
Query: 410 HTELSSKL----VECFDEAMVTSAI--EKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ EL SK+ E E I EKLEQA +I GR K YSI+ KM
Sbjct: 193 YYELVSKVQKKRAEREKEINEIKNILQEKLEQAGIKADID-----GRPKHFYSIYRKMHY 247
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K T D+I D+ +R+IV+ +DCY AL +VH LW +PG+ KDYI PK N Y
Sbjct: 248 KNKTFDQIFDLLAVRVIVDTVKDCYAALGIVHTLWKPIPGRFKDYIAMPKPNMY 301
>gi|123965455|ref|YP_001010536.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9515]
gi|123199821|gb|ABM71429.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9515]
Length = 769
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 183/291 (62%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D ++KAF A +AH GQ+RASG+PY++H + A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QDLIVKAFKLAYQAHNGQLRASGEPYIIHPIAVADLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IALSEIEINFGLEVKVLVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T+ L +++R A+ET EI+ PLANRLGI+ +K +LE+L FK L PD
Sbjct: 174 LVKLADRLHNMRTIQWLNEERKERIARETREIYAPLANRLGINRFKWELEDLAFKFLEPD 233
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ L ++V E + + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYKNLKDQIVVKRSDREKRLDNTLNLMKENLVSSGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV N + CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 294 QFSEIYDVAALRIIVSNLDSCYKALAVVHDTFRPIPGRFKDYIGLPKPNGY 344
>gi|320161070|ref|YP_004174294.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
gi|319994923|dbj|BAJ63694.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
Length = 733
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 185/307 (60%), Gaps = 21/307 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ AE+AH GQ R SG+PY+ HC A +LA I T+V AGLLHDT++D +
Sbjct: 20 EMICKAYQLAEKAHEGQKRLSGEPYITHCEAVAAILADIRVPPTLVIAGLLHDTVEDTPI 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS-----------------KTVEAD 333
+ + I R FG +A LV+GV+KL+ L +++R++ AS K + +
Sbjct: 80 TLEDIRREFGDEIAKLVDGVTKLTHLPRVSRDDQYASEVEEYGLALETTEDTRRKQLAQE 139
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
L FLAM D R VLIKLADRLHNM TL +P KR+R A+ETL+IF PLANRLGI
Sbjct: 140 TLRKTFLAMGEDIRVVLIKLADRLHNMRTLGYMPENKRRRIAQETLDIFAPLANRLGIWQ 199
Query: 393 WKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE+L F+++NP+++ E++ L + E + I +L L+ I + GR
Sbjct: 200 IKWELEDLAFRYVNPEKYKEIAELLAQKRADREKQIQEIISRLRTILEQAGIQAEI-TGR 258
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +YSI+ KM++K + D + D+ G+RLIV +DCY AL ++H W +P + DYI
Sbjct: 259 PKHIYSIYKKMVEKSRSFDSLMDLRGVRLIVPTTQDCYAALGIIHTHWRPIPHEFDDYIA 318
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 319 APKDNNY 325
>gi|345017525|ref|YP_004819878.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032868|gb|AEM78594.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 719
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A AH GQMR SG+PY++H +E A +LA + + T +AAGLLHD ++D +
Sbjct: 20 ELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTDV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|326390128|ref|ZP_08211689.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
gi|325993776|gb|EGD52207.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
Length = 719
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A AH GQMR SG+PY++H +E A +LA + + T +AAGLLHD ++D +
Sbjct: 20 ELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTDV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|167037441|ref|YP_001665019.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115854|ref|YP_004186013.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856275|gb|ABY94683.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928945|gb|ADV79630.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 719
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A AH GQMR SG+PY++H +E A +LA + + T +AAGLLHD ++D +
Sbjct: 20 ELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTDV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|402837012|ref|ZP_10885543.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
gi|402270028|gb|EJU19297.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
Length = 732
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 191/306 (62%), Gaps = 10/306 (3%)
Query: 215 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
+EF+A + + + V+KAF A R H GQ+R SG+PY++H + + +LA G ++
Sbjct: 11 EEFIAQLKSINPKYDLPLVVKAFEIANRLHSGQLRKSGEPYIIHPIAVSFILATFGMDTE 70
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 334
+ AGL+HD ++D + + + FG +A LV+GV+KL + ++E ++A+
Sbjct: 71 TIIAGLMHDVVEDTPYTREQLVEDFGEEIALLVDGVTKLGNIKYDSKEE------LQAEN 124
Query: 335 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 393
MFLAM+ D R ++IKLADRLHNM TL+ +P KR+ A ETLEI+ PLA RLGI +
Sbjct: 125 FRKMFLAMSKDIRVLIIKLADRLHNMRTLEYMPTTKREEKALETLEIYAPLAGRLGIYSI 184
Query: 394 KVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRH 451
K +LE+L +L+P ++ ELS+K+ + EA+V I +++ L NI + V GR
Sbjct: 185 KFELEDLALMYLHPTEYRELSNKVNKRRQSREAVVQQLITEIKAGLDKANIEYEV-TGRS 243
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K LYSI+ KM+ +K +DEI D+ +R+IV+N +DCY L +VH W +PG+ KDYI
Sbjct: 244 KHLYSIYKKMVIQKKQLDEIFDLTAIRVIVDNIKDCYATLGLVHTRWTPIPGRFKDYIAM 303
Query: 512 PKFNGY 517
PK N Y
Sbjct: 304 PKPNMY 309
>gi|392941128|ref|ZP_10306772.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
gi|392292878|gb|EIW01322.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
Length = 719
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A AH GQMR SG+PY++H +E A +LA + + T +AAGLLHD ++D +
Sbjct: 20 ELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTDV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|33860751|ref|NP_892312.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633693|emb|CAE18650.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 769
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 194/316 (61%), Gaps = 11/316 (3%)
Query: 207 EGNLETYAKEFLANAQLKHKI--FREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAM 264
E N+ + E + N ++ +K +D ++KAF A AH GQ+RASG+PY++H + A
Sbjct: 35 EINIPNWLLEIIQNYEVSNKKNNSNQDLIVKAFKLAYEAHNGQLRASGEPYIIHPLAVAD 94
Query: 265 LLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN 324
LL IGA+S+VVAAGLLHD ++D ++ I FG V LVEGV+KL + NN
Sbjct: 95 LLKEIGASSSVVAAGLLHDVVEDTGIALSEIEVNFGLEVKVLVEGVTKLGGI----HFNN 150
Query: 325 TASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 383
+A+ L MFLAMA D R VL+KLADRLHNM T+ L +++R A+ET EI+ P
Sbjct: 151 RTE--AQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIQWLNEERKERIARETREIYAP 208
Query: 384 LANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKN 441
LANRLGI+ +K +LE+L FK L P+++ L ++ V+ D E + + +++ L
Sbjct: 209 LANRLGINRFKWELEDLAFKFLEPEEYKNLKDQIAVKRSDREKRLNVTLNLMKENLVSSG 268
Query: 442 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 501
+ + GR K LY I KM +++ EI+D+ LR+IV N + CY+AL VVH + +
Sbjct: 269 LVNFEITGRPKHLYGIWSKMERQQKQFGEIYDVAALRIIVSNTDSCYKALAVVHDTFRPI 328
Query: 502 PGKMKDYITRPKFNGY 517
PG+ KDYI PK NGY
Sbjct: 329 PGRFKDYIGLPKPNGY 344
>gi|254479350|ref|ZP_05092687.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034716|gb|EEB75453.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
Length = 720
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 184/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ A +AH GQ+R SG+PY++H VE A +LA + + T +AAGLLHD ++D +
Sbjct: 22 DLLYKAYNFAVKAHEGQVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLLHDVIEDTGV 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 82 TYDQLMEEFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 136 IKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 195
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ E + + I ++Q L + I V GR K YSI+ KM + T
Sbjct: 196 YYDLVEKVAAKRKEREEFIQNIIATIKQKLDEMGIPAEV-DGRPKHFYSIYKKMKTQNKT 254
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 255 FEEIYDLLAIRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 304
>gi|20807650|ref|NP_622821.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Thermoanaerobacter tengcongensis MB4]
gi|20516195|gb|AAM24425.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Thermoanaerobacter tengcongensis MB4]
Length = 718
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 184/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ A +AH GQ+R SG+PY++H VE A +LA + + T +AAGLLHD ++D +
Sbjct: 20 DLLYKAYNFAVKAHEGQVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLLHDVIEDTGV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMEEFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ E + + I ++Q L + I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIIATIKQKLDEMGIPAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 FEEIYDLLAIRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|443322004|ref|ZP_21051040.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
gi|442788304|gb|ELR98001.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
Length = 754
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 188/309 (60%), Gaps = 17/309 (5%)
Query: 217 FLANAQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
LAN H+ ED + +A+ A H+ Q R SG+PY++H V A LL +G +S
Sbjct: 24 LLANGDPNHQYHTEDNRLICQAYEFAYELHKQQTRKSGEPYIVHPVAVAGLLRDLGGDSA 83
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEAD 333
++AAG LHD ++D +S + I FG V LVEGV+KLS+ +SKT +A+
Sbjct: 84 MIAAGFLHDVVEDTEVSLEEIESRFGEQVRQLVEGVTKLSKFE-------FSSKTERQAE 136
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MFLAMA D R +++KLADRLHNM TL L L K+Q A ET EIF PLANRLGI
Sbjct: 137 NFRRMFLAMAKDIRVIVVKLADRLHNMRTLQHLSLEKQQAIALETKEIFAPLANRLGIGR 196
Query: 393 WKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDK----NISFLVLC 448
K +LE+L FK+L P+ + + + + E + + IEK+ Q LKD+ I + +
Sbjct: 197 LKWELEDLSFKYLEPEAYRTMQNHIAEKRTDR--EARIEKVTQLLKDRLQTIGIKIIEIQ 254
Query: 449 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 508
GR K LY I+ KM ++ +EI+DI GLRLIV+N+E+CY+AL +VH + +PG+ KDY
Sbjct: 255 GRPKHLYGIYQKMCLQQKQFNEIYDIAGLRLIVDNKEECYRALAIVHDTFRPIPGRFKDY 314
Query: 509 ITRPKFNGY 517
I PK N Y
Sbjct: 315 IGLPKSNRY 323
>gi|399887294|ref|ZP_10773171.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
arbusti SL206]
Length = 736
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 186/293 (63%), Gaps = 14/293 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+DF+ KA+ A AH+ Q R SG+PY++H E A +LA +G + +AAGLLHD ++D
Sbjct: 18 KDFINKAYNFAVDAHKKQKRESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTE 77
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
SY+ + R F + VADLVEGV+KL ++S +E +AD + M LAMA D R +
Sbjct: 78 YSYEDVTREFNSEVADLVEGVTKLGKISYKTKEEQ------QADNVRKMLLAMAKDIRVI 131
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKL+DRLHNM TL + + K++ AKETL+IF PLA+RLGIS K +LE+L F+++ P+
Sbjct: 132 LIKLSDRLHNMRTLRYMSVKKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYMKPN 191
Query: 409 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
++ EL S K VE E + + L + L++ NI + GR K YSI+ KM+ K
Sbjct: 192 EYYELVDDISEKRVE--REEYIKDIVVDLHKNLEEANI-LADIDGRPKHFYSIYRKMVNK 248
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I D+ +R++V + +CY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 249 NKTLDQIFDLTAIRILVNDIRECYTVLGIVHTMYKPIPGRFKDYIAMPKPNMY 301
>gi|291545648|emb|CBL18756.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus sp. SR1/5]
Length = 774
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 190/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH+ Q R SG+PY++H + A++LA + + + AGLLHD ++D +++
Sbjct: 62 MIEKAYKVASEAHKDQKRKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMT 121
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ + + FG+ VA LV+GV+KL QLS + V+A+ L MFLAMA D R +LI
Sbjct: 122 YEEVEKEFGSEVALLVDGVTKLGQLS-----YSKDKVEVQAENLRKMFLAMAKDIRVILI 176
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD +
Sbjct: 177 KLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDVY 236
Query: 411 TELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L K L + E V S +++++Q ++D NI V GR K +SI+ KM+ + T+
Sbjct: 237 YDLVEKVALRKSAREEFVNSIVKQVKQHMEDANIRAQV-DGRVKHFFSIYKKMVNQDKTI 295
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IV+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 296 DQIYDLFAVRIIVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKANMY 344
>gi|411116988|ref|ZP_11389475.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoriales
cyanobacterium JSC-12]
gi|410713091|gb|EKQ70592.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoriales
cyanobacterium JSC-12]
Length = 751
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 184/291 (63%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H+GQ RASG+PY++H V A LL +G S ++AAG LHD ++D +
Sbjct: 42 DLICRAFDFAYQLHQGQYRASGEPYIIHPVAVAGLLRDLGGGSVMIAAGFLHDVVEDTDV 101
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ D + FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 102 TADELETLFGKEVRTLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 154
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ LP KR++ A ET EIF PLANRLGI +K +LE+L FK+L PD
Sbjct: 155 VVKLADRLHNMRTLEHLPDAKRRQIALETREIFAPLANRLGIGRFKWELEDLAFKYLEPD 214
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + + E EA +++ + L + L I + GR K LY I+ KM +++
Sbjct: 215 AYRNVQELVAEKRTDREARLSNIVSALRERLTQVGIRVFDISGRPKHLYGIYQKMQRQQK 274
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV++ E+CY++L +VH ++ +PG+ KDYI PK N Y
Sbjct: 275 GYEEIYDVAAVRIIVDSNEECYRSLAIVHDMFRPIPGRFKDYIGLPKPNRY 325
>gi|218296101|ref|ZP_03496870.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
gi|218243478|gb|EED10007.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
Length = 726
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 193/306 (63%), Gaps = 24/306 (7%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ AE AHRGQ+R SG+PY+ H V A +LA++ ++ VAAGLLHDT++D ++
Sbjct: 26 VHKAYLFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDADTVAAGLLHDTMEDCGVAG 85
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + R FG V +VEG +K+S+L K A N + A+ L MF+AMA D R +++K
Sbjct: 86 EELERRFGPAVRRIVEGETKVSKLYKFA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ +
Sbjct: 143 LADRLHNLRTLEHMPEGKQKRIAQETLEIYAPLAHRLGMGQIKWELEDLSFRYLHPEAYQ 202
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKK 464
L ++L E + E MV A+E LE+ALK + + GR K LYSI KM ++
Sbjct: 203 ALLARLQETQEARERMVKRAMEVLEEALKQDALLQSQLQGFEVTGRPKHLYSIWKKMERE 262
Query: 465 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 511
+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 263 GKALEQIYDLLAVRVILDPKPSPTEEAKGLREKQVCYHVLGLVHALWQPIPGRVKDYIAV 322
Query: 512 PKFNGY 517
PK NGY
Sbjct: 323 PKPNGY 328
>gi|428305760|ref|YP_007142585.1| (p)ppGpp synthetase I SpoT/RelA [Crinalium epipsammum PCC 9333]
gi|428247295|gb|AFZ13075.1| (p)ppGpp synthetase I, SpoT/RelA [Crinalium epipsammum PCC 9333]
Length = 761
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 180/290 (62%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF H GQ RASG+PY+ H V A LL +G + ++AAG LHD ++D +
Sbjct: 52 DLICRAFEFGYNLHDGQRRASGEPYICHPVAVAGLLRDLGGSGAMIAAGFLHDIVEDTDV 111
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + + FG V LVEGV+KLS+L N ++ K +A+ MF+AMA D R ++
Sbjct: 112 TSDDLEKMFGKEVRQLVEGVTKLSKL------NFSSKKERQAENFRRMFIAMAHDIRVIV 165
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ LP KR+R A ET EIF PLANRLGI +K +LE+L FK+L P+
Sbjct: 166 VKLADRLHNMRTLEHLPDEKRRRIALETREIFAPLANRLGIGRFKWELEDLAFKYLEPEA 225
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ + E EA +T+ E L+Q L I L L GR K LY I+ KM +++
Sbjct: 226 YRKIQLLVAEKRTDREARLTNVTEILQQGLTASGIECLELSGRPKHLYGIYQKMQRQQKE 285
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ +R++V+ E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 286 FSEIFDLAAIRILVKTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 335
>gi|297544507|ref|YP_003676809.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842282|gb|ADH60798.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 719
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + K++ A AH GQMR SG+PY++H +E + +LA + + T +AAGLLHD ++D +
Sbjct: 20 DLIYKSYDFAVNAHDGQMRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTDV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYEQLLEKFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD+
Sbjct: 134 IKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ E ++ + I +++ LK+ I V GR K YSI+ KM + +
Sbjct: 194 YYDLVEKVAAKRKEREELIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKS 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 FDQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|28211806|ref|NP_782750.1| GTP pyrophosphokinase [Clostridium tetani E88]
gi|28204248|gb|AAO36687.1| putative GTP pyrophosphokinase [Clostridium tetani E88]
Length = 731
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 187/292 (64%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AH+ Q R SG+PY++H VE A +LA +G ++ + AGLLHD ++D
Sbjct: 19 ELVKKAYEIANGAHKQQKRESGEPYIVHPVEVACILADMGMDADTIVAGLLHDVIEDTEY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + R F VADLVEGV+KL ++ ++E +AD + M LAMA D R +L
Sbjct: 79 TYEDVEREFNKQVADLVEGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAQDVRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ AKET +I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGISKIKWELEDLAFRYINPNE 192
Query: 410 H----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ E++ + VE A + + +L ++L+ I + GR K YSI+ KM+ K
Sbjct: 193 YYSFVKEIAERRVERI--AYIELIVNELTKSLEGSGIKSDI-EGRPKHFYSIYRKMINKN 249
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I D+ +R++V+ +DCY AL +VH ++ +PG+ KDYI PK N Y
Sbjct: 250 KTLDQIFDLTAIRILVDTVKDCYAALGIVHTMYKPIPGRFKDYIAMPKPNMY 301
>gi|254424339|ref|ZP_05038057.1| RelA/SpoT family protein [Synechococcus sp. PCC 7335]
gi|196191828|gb|EDX86792.1| RelA/SpoT family protein [Synechococcus sp. PCC 7335]
Length = 771
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/289 (44%), Positives = 184/289 (63%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V +AF A + H+GQMRASG+PY+ H V A LL ++G +S ++AAG LHD ++D ++
Sbjct: 61 LVCQAFEYAYQLHKGQMRASGEPYIAHPVAVAGLLRSLGGDSAMIAAGFLHDVVEDTEVT 120
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA V LVEGV+KLS+ E ++ ++ +A+ MFLAMA D R +++
Sbjct: 121 ADEIGAIFGAEVRHLVEGVTKLSKF-----EFDSKTEQ-QAENFRRMFLAMAKDIRVIVV 174
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R A+ETLEIF PLANRLGI +K +LE+LCFK+L P+ +
Sbjct: 175 KLADRLHNMRTLQHLRPDKQVRIARETLEIFAPLANRLGIGRFKWELEDLCFKYLEPEAY 234
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
EL+ +V+ EA + L++ + I + R K LYSI+ KM +++
Sbjct: 235 KELTQLIVDKRTDREARLQQVSHVLKEGISKLGIKCKDVSSRPKHLYSIYKKMQRQQKEF 294
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI +RL+V +++CY+AL V H L+ +PG+ KDYI PK N Y
Sbjct: 295 QEIYDIAAIRLLVNTKDECYRALAVAHDLYRPIPGRFKDYIGLPKPNRY 343
>gi|373468555|ref|ZP_09559802.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
082 str. F0431]
gi|371766018|gb|EHO54298.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
082 str. F0431]
Length = 762
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 189/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A++AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 48 MITKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAIT 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
YD + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 YDELADMFGVDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+LS KL + + V I+K Q L + F + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDDIIKKFSQHLSATGMKF-TINGRVKHLFSIYKKMVNQNKTL 281
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IVE+ DCY AL H+++ +PG+ KDYI PK N Y
Sbjct: 282 DQIYDVFAIRIIVESVTDCYLALGTAHEIYKPIPGRFKDYIAMPKPNMY 330
>gi|300914191|ref|ZP_07131507.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307724574|ref|YP_003904325.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter sp. X513]
gi|300889126|gb|EFK84272.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307581635|gb|ADN55034.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X513]
Length = 719
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 183/289 (63%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH GQ+R SG+PY++H +E A +LA + + T +AAGLLHD ++D ++
Sbjct: 21 LIYKAYDFAVNAHDGQIRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTDVT 80
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +LI
Sbjct: 81 YGQLLEYFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILI 134
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD++
Sbjct: 135 KLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDEY 194
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 195 YDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTF 253
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 254 EQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|331269250|ref|YP_004395742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium botulinum BKT015925]
gi|329125800|gb|AEB75745.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium botulinum BKT015925]
Length = 730
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 186/291 (63%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D +IKA+ AE AH+ Q R SG+PY++H VE A +LA +G + +AA LLHD ++D
Sbjct: 18 KDIIIKAYNYAENAHKEQKRVSGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTD 77
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+Y+ + R F + VA+LVEGV+KL ++ +E +++ + M LAM D R +
Sbjct: 78 YTYEDVERDFNSEVANLVEGVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVI 131
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL + + K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+
Sbjct: 132 LIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLNPN 191
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L K+ E E + I +L + L+D I + GR K YSI+ KM+ K
Sbjct: 192 EYYDLVRKVAEKRKEREEYIERIIHELSEKLEDAGIKSEI-AGRPKHFYSIYRKMVIKNK 250
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I D+ +R++VE+ +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 TIDQIFDLTAVRILVEDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMY 301
>gi|291297171|ref|YP_003508569.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus ruber DSM 1279]
gi|290472130|gb|ADD29549.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus ruber DSM 1279]
Length = 750
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 193/308 (62%), Gaps = 23/308 (7%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A A RAH GQ R SG+PY++H V A +LA +G + + AGLLHDT++D +
Sbjct: 42 VREALEFAYRAHEGQQRKSGEPYIVHPVAVAQILAELGLDVETLLAGLLHDTIEDTEVRP 101
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLAR--ENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ I FGA V +VEG +K+S+L KLA + + ++ A+ L MF+AMA D R ++
Sbjct: 102 EDIEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHAEGKHAEDLRQMFIAMAEDVRIII 161
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHN+ TL+ +P K+QR A+ETLEI+ PLA+RLGI K++LE+L F++L+P+
Sbjct: 162 VKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPEN 221
Query: 410 HTELSSKLV--ECFDEAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKML 462
+ L +L EA V +A EKLEQAL ++I + GR K L+SI KM
Sbjct: 222 YQALERRLKSHRAEREAAVQAAKEKLEQALARDFILKQSIKKFEVTGRTKHLFSIWKKME 281
Query: 463 KKKLTMDEIHDIYGLRLIV------ENEED-------CYQALRVVHQLWAEVPGKMKDYI 509
++ T+++I+D+ LR+I+ + EE+ CY L +VH LW +PG++KDYI
Sbjct: 282 REGKTIEQIYDLLALRVILDPRQGPDPEENSLREKQVCYHVLGLVHALWQPIPGRVKDYI 341
Query: 510 TRPKFNGY 517
PK NGY
Sbjct: 342 AVPKPNGY 349
>gi|312143973|ref|YP_003995419.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium hydrogeniformans]
gi|311904624|gb|ADQ15065.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium hydrogeniformans]
Length = 715
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 194/290 (66%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D VIKA+ A++AH GQ R SG+P++ H + AM+LA + + + A ++HD ++D +
Sbjct: 20 DLVIKAYNYAKKAHEGQYRVSGEPFVDHPLGVAMILADLELDIISIVASMMHDVVEDTEI 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I + FG VA +VEGV+KL+++ +E+ +A+ L MF+AMA D R VL
Sbjct: 80 TSEDIRKEFGDEVAHIVEGVTKLTRMQFKTKEDQ------QAESLRKMFVAMAEDIRVVL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ L KR+ ++ETLEI+ PLA+RLG+S K +LE+LCF++L PD
Sbjct: 134 IKLADRLHNMRTLNYLKKEKRKEKSRETLEIYAPLAHRLGMSKLKWELEDLCFRYLKPDM 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+S K+ + E + AIEKL++ L+ +I + GR K L+SI+ KM +K++
Sbjct: 194 YYEVSHKVQTNREQREKSIQEAIEKLKETLEKHDIESEIY-GRPKHLFSIYNKMKRKEVE 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R++VEN ++CY+ L ++H++W +PG+ KDYI PK N Y
Sbjct: 253 FDEIYDLTAVRVLVENVKECYEVLGIIHEIWKPMPGRFKDYIAMPKSNMY 302
>gi|428221859|ref|YP_007106029.1| RelA/SpoT family (p)ppGpp synthetase [Synechococcus sp. PCC 7502]
gi|427995199|gb|AFY73894.1| (p)ppGpp synthetase, RelA/SpoT family [Synechococcus sp. PCC 7502]
Length = 752
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 183/292 (62%), Gaps = 11/292 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED V +AF A + H+GQ RASG+PY+LH ++ A LL +G S ++AAG LHD ++D
Sbjct: 45 EDIVCQAFKLAYKLHQGQTRASGEPYILHPIQVANLLRDLGGGSAMIAAGFLHDVVEDTS 104
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARA 347
++ I FGA V LVEGV+KLS++ N SKT +A+ MFL MA D R
Sbjct: 105 VTLAEIEAQFGAEVRQLVEGVTKLSKI-------NFNSKTERQAENFRRMFLYMAEDIRV 157
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+++KLADRLHNM TL+ L K+ A+ET +IF PLANRLGI +K +LE+L FK+L
Sbjct: 158 IVVKLADRLHNMRTLEHLAPHKQVLIARETRDIFAPLANRLGIGQFKWELEDLAFKYLEA 217
Query: 408 DQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+Q+ E+ + + E EA +T A+E L ++ I+ + GR K LY I+ KM +++
Sbjct: 218 EQYREMKALVAETRSDREARITEAVEILRSRIQKIGITGFEVTGRPKHLYGIYEKMHRQQ 277
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI +R+IV N ++CY+ L + H + VPG+ KDYI PK NGY
Sbjct: 278 KPYGEIYDIAAVRVIVNNTDECYRILAIAHDCFRPVPGRFKDYIALPKPNGY 329
>gi|302670706|ref|YP_003830666.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
gi|302395179|gb|ADL34084.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
Length = 760
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 202/333 (60%), Gaps = 19/333 (5%)
Query: 201 MEDNIVEGNLETYAKEFLANAQLKHKIFRE----------DFVIKAFYEAERAHRGQMRA 250
M N +G +E +EFL L + + + KA+ +A AH+GQ+R
Sbjct: 1 MPQNFDDGKIEAI-EEFLTPDTLYEGLIKRVRKYHPSDDISLIEKAYNQAAEAHQGQLRK 59
Query: 251 SGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGV 310
SG+PY++H + A++LA + + +AAGLLHD ++D + + I +FGA VA LV+GV
Sbjct: 60 SGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTICTKEEIQESFGADVALLVDGV 119
Query: 311 SKLSQLSKLARENNTASKT---VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 366
+KL+ L +L+ +N ++ ++A L MFLAMA D R +LIKLADRLHNM TL +P
Sbjct: 120 TKLTAL-QLSTDNTNKTQEQIDMQAQNLRKMFLAMAKDIRVILIKLADRLHNMRTLAHMP 178
Query: 367 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEA 424
K+QR A+ETL+I+ P+A RLGIS KV+L++L K+L PD + +L K + + E
Sbjct: 179 PEKQQRIAQETLDIYSPIAGRLGISRIKVELDDLSLKYLKPDVYYDLVDKVSIRKSEREK 238
Query: 425 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 484
V E + A+K I V GR K +SI+ KM + T+D+I+D++ +R+IV
Sbjct: 239 YVEDICENVRDAIKTAGIEGEV-NGRVKHFFSIYKKMRNQNKTLDQIYDLFAIRIIVATV 297
Query: 485 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 298 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMY 330
>gi|219856114|ref|YP_002473236.1| hypothetical protein CKR_2771 [Clostridium kluyveri NBRC 12016]
gi|219569838|dbj|BAH07822.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 733
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 186/293 (63%), Gaps = 14/293 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E V KA+Y A+ AH+ Q R SG+PY++H VE A +LA +G +++ + AGLLHD ++D
Sbjct: 25 EKMVKKAYYFADEAHKKQKRESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTE 84
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
S + + R F VA+LVEGV+KL ++ +E +AD + M LAM+ D R +
Sbjct: 85 FSREDVSREFSVEVANLVEGVTKLGKIEYKTKEEQ------QADNVRKMLLAMSDDIRVI 138
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL LP+ K++ AKET +I+ PLA RLG+S K +LE+L F+++N +
Sbjct: 139 LIKLADRLHNMRTLKFLPVKKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQN 198
Query: 409 QH----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
++ ++S K VE E + I+KL + ++ I+ + GR K YSI+ KM+KK
Sbjct: 199 EYYFIVRKISEKRVE--REKYIEQIIKKLRENMQKAGIN-TDIEGRPKHFYSIYRKMVKK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I D+ +R++V +DCY AL + H ++ VPG+ KDYI PK N Y
Sbjct: 256 NKTIDQIFDLTAVRILVSTMKDCYAALGIAHTIYKPVPGRFKDYIAMPKANMY 308
>gi|126695549|ref|YP_001090435.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
gi|126542592|gb|ABO16834.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
Length = 769
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 183/291 (62%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
++ ++KAF A +AH GQ RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QNLIVKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLSEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 409 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYLDLKDQIAVKRSDREKRLKVTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+N + CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 294 HFHEIYDVAALRIIVDNSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGY 344
>gi|218246275|ref|YP_002371646.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8801]
gi|257059322|ref|YP_003137210.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8802]
gi|218166753|gb|ACK65490.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8801]
gi|256589488|gb|ACV00375.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8802]
Length = 743
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 182/290 (62%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D ++
Sbjct: 38 LICRAFNFAYQLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDKAMIAAGFLHDVVEDTDVT 97
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAVL 349
+ I FG+ V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 98 VEQIEENFGSEVRQLVEGVTKLSKF-------NFSSKTEHQAENFRRMFLAMAKDIRVIV 150
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ L K++R A+ET EIF PLANRLGI +K +LE+L FK+L P+
Sbjct: 151 VKLADRLHNMRTLEHLKPEKQERIARETKEIFAPLANRLGIWRFKWELEDLSFKYLEPEA 210
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ S + E E + + E L Q L+ + + L GR K LY I+ KM +++
Sbjct: 211 YREIQSLVAEKRSDRETRLETIKEMLRQRLQKIGVQVVELQGRPKHLYGIYHKMQRQQKG 270
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI LR+IV+N EDCY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 271 FNQIYDIAALRIIVKNNEDCYRALAVVHDAFKPIPGRFKDYIGLPKPNRY 320
>gi|153955745|ref|YP_001396510.1| RelA protein [Clostridium kluyveri DSM 555]
gi|146348603|gb|EDK35139.1| RelA [Clostridium kluyveri DSM 555]
Length = 726
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 186/293 (63%), Gaps = 14/293 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E V KA+Y A+ AH+ Q R SG+PY++H VE A +LA +G +++ + AGLLHD ++D
Sbjct: 18 EKMVKKAYYFADEAHKKQKRESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTE 77
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
S + + R F VA+LVEGV+KL ++ +E +AD + M LAM+ D R +
Sbjct: 78 FSREDVSREFSVEVANLVEGVTKLGKIEYKTKEEQ------QADNVRKMLLAMSDDIRVI 131
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL LP+ K++ AKET +I+ PLA RLG+S K +LE+L F+++N +
Sbjct: 132 LIKLADRLHNMRTLKFLPVKKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQN 191
Query: 409 QH----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
++ ++S K VE E + I+KL + ++ I+ + GR K YSI+ KM+KK
Sbjct: 192 EYYFIVRKISEKRVE--REKYIEQIIKKLRENMQKAGIN-TDIEGRPKHFYSIYRKMVKK 248
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I D+ +R++V +DCY AL + H ++ VPG+ KDYI PK N Y
Sbjct: 249 NKTIDQIFDLTAVRILVSTMKDCYAALGIAHTIYKPVPGRFKDYIAMPKANMY 301
>gi|340357216|ref|ZP_08679839.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
gi|339618078|gb|EGQ22679.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
Length = 732
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 185/292 (63%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
DF+ KAF A+ AH GQ R+SG+PY+ H ++ A +LA + + VAAG LHD ++D +
Sbjct: 26 DFIKKAFVVAKAAHEGQFRSSGEPYINHPIQVAGILAELQMDPETVAAGFLHDVVEDTEV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + I R FG VA LV+GV+KL +L + E +A+ MF+AMA D R +L
Sbjct: 86 SREDIIREFGDEVAMLVDGVTKLDKLKFKSNEEK------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++R ++ETLEIF PLA+RLGIST K +LE++ ++ NP Q
Sbjct: 140 IKLADRLHNMRTLKHVPAAKQRRVSEETLEIFSPLAHRLGISTIKWELEDIALRYSNPQQ 199
Query: 410 HTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + K VE E + +E++ L + I+ + GR K LYSI+ KM+ +K
Sbjct: 200 YYRIVNLMKQKRVER--EKYLQDVMEQMRVELDNMGIAS-EMHGRPKHLYSIYQKMVIQK 256
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V++ +DCY AL ++H LW +PG+ KDYI PK N Y
Sbjct: 257 KEFNEIYDLLAVRIVVKSIKDCYAALGIIHTLWKPMPGRFKDYIAMPKQNLY 308
>gi|289578226|ref|YP_003476853.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter italicus Ab9]
gi|289527939|gb|ADD02291.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter italicus Ab9]
Length = 719
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + K++ A AH GQMR SG+PY++H +E + +LA + + T +AAGLLHD ++D +
Sbjct: 20 DLIYKSYDFAVNAHDGQMRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTDV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYEQLLEKFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD+
Sbjct: 134 IKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ E ++ + I +++ LK+ I V GR K YSI+ KM + +
Sbjct: 194 YYDLVEKVAAKRKEREELIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKS 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D+ +R+IV ++CY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 FDQIYDLLAVRIIVNTVKECYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|342218775|ref|ZP_08711379.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
gi|341588903|gb|EGS32275.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
Length = 737
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 195/318 (61%), Gaps = 10/318 (3%)
Query: 203 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 262
++I EG +E + LA + ED + KAF A AH+ Q R SG+ Y++H +
Sbjct: 4 EHIPEGTVEEKFQYLLATIRKYQPDLSEDILTKAFILAADAHKTQRRVSGELYIVHPLAV 63
Query: 263 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 322
A +LA + ++T + A LLHD ++D + + I FG VA LV+GV+KL++L +E
Sbjct: 64 AQILADMKIDATTITASLLHDVVEDTKYTLEEIEERFGKEVAFLVDGVTKLNRLDYRTKE 123
Query: 323 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 381
+ + + L MFLAMA D R V+IKLADRLHNM TL + K++R ++ETLEIF
Sbjct: 124 DQ------QLNSLRKMFLAMAKDIRVVVIKLADRLHNMRTLRYMRSDKQKRISQETLEIF 177
Query: 382 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKD 439
PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V AI L++AL D
Sbjct: 178 APLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHAREEIVNDAITVLQKALAD 237
Query: 440 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 499
+ISF + GR K LYSI+ KM K + +++D+Y +R+IV+ +DCY L +VH LW
Sbjct: 238 SHISFEI-NGRPKHLYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQDCYGVLGIVHSLWK 296
Query: 500 EVPGKMKDYITRPKFNGY 517
+P + KDYI PK N Y
Sbjct: 297 PLPYRFKDYIAMPKPNNY 314
>gi|255526671|ref|ZP_05393576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
gi|255509651|gb|EET85986.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
Length = 724
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 185/289 (64%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A+ AH+ Q R SG+PY++H VE A +LA +G +++ + AGLLHD ++D +
Sbjct: 20 MVEKAYNLADEAHKQQKRESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEYT 79
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ I F VA+LV+GV+KL ++ +E +AD + M LAMA D R +LI
Sbjct: 80 YEDICSEFSVEVANLVDGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVILI 133
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADR+HNM TL +P+ K++ AKET +I+ PLA+RLG+S K +LE+L F+++NP+++
Sbjct: 134 KLADRMHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINPNEY 193
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ K+ E + E + I++LE L IS + GR K YSI+ KM+ K T+
Sbjct: 194 YFIVRKISEKREEREEYIGEVIQQLENNLDRAGISSEI-DGRPKHFYSIYRKMVNKNKTI 252
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R++VE +DCY AL +VH ++ +PG+ KDYI PK N Y
Sbjct: 253 DQIFDLTAVRILVETVKDCYAALGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|158320743|ref|YP_001513250.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus oremlandii OhILAs]
gi|158140942|gb|ABW19254.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus oremlandii OhILAs]
Length = 724
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KAF AE+AH+GQ R SG+ Y +H VE A +L + +++ + AGLLHD ++D
Sbjct: 20 ELITKAFNYAEKAHQGQYRKSGEDYFIHPVEVARILIDLQMDASTIVAGLLHDVIEDTEY 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
YD + FG +ADLVEGV+K+++LS ++E +A+ L M LAMA D R +L
Sbjct: 80 GYDMVKEEFGVEIADLVEGVTKITRLSFNSKEER------QAENLRKMVLAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL K++ A ETLEIF P+ANRLGIS K +LE++C ++++P
Sbjct: 134 IKLADRLHNMRTLKFQNPEKQKEKATETLEIFAPIANRLGISRIKWELEDICLRYIDPQG 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + E ++ IE L + L+D +I + GR K YSI+ KM + +
Sbjct: 194 YYDLVEKVSQKRKDRENFISDIIETLREKLEDFDIENEI-TGRPKHFYSIYRKMTYQGKS 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI D +R+IV + +DCY L VVH +W +PG+ KDYI PK N Y
Sbjct: 253 FDEIFDFMAVRVIVNSVKDCYGVLGVVHTIWKPIPGRFKDYIAMPKPNMY 302
>gi|221633684|ref|YP_002522910.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
gi|221157017|gb|ACM06144.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
Length = 720
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 190/315 (60%), Gaps = 21/315 (6%)
Query: 214 AKEFL---ANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
A EFL NA L + + AF A AH G R SG+PYL H + A++LA +
Sbjct: 2 APEFLKRLPNADL-------ELIHHAFELARSAHAGMRRRSGEPYLSHPLAVALILADLQ 54
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS--- 327
+ +AA LLHD L+D ++ + + FG VA LV+GV+KL ++ +L+ EN S
Sbjct: 55 LDQETIAAALLHDVLEDTDVTIEQLRERFGPRVARLVDGVTKLGKI-RLSPENEPVSLER 113
Query: 328 -KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 385
K +A+ L M LAMA D VLIKLADRLHNM TLD LP K++R A+ET+EI+ PLA
Sbjct: 114 EKIRQAESLRKMLLAMAEDVGVVLIKLADRLHNMRTLDHLPPEKQRRIARETMEIYAPLA 173
Query: 386 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD---EAMVTSAIEKLEQALKDKNI 442
NRLGI K +LE+L FK+L P Q E ++ +E E + IE++++AL D I
Sbjct: 174 NRLGIGQLKAELEDLAFKYLEP-QTYETIARALESRGHDREQYLQEVIEQVKRALADAGI 232
Query: 443 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 502
V+ GR K + SI KM +K+ DEI+D+ G+R+IV+ + DCY AL ++H +W +P
Sbjct: 233 RA-VVTGREKHIASIARKMREKQRNFDEIYDVLGIRVIVDEQRDCYAALAIIHGMWHPIP 291
Query: 503 GKMKDYITRPKFNGY 517
G+ DYI PK N Y
Sbjct: 292 GQFDDYIANPKENLY 306
>gi|296187176|ref|ZP_06855573.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
gi|296048211|gb|EFG87648.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
Length = 724
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 185/289 (64%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A+ AH+ Q R SG+PY++H VE A +LA +G +++ + AGLLHD ++D +
Sbjct: 20 MVEKAYNLADEAHKQQKRESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEYT 79
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ I F VA+LV+GV+KL ++ +E +AD + M LAMA D R +LI
Sbjct: 80 YEDICSEFSVEVANLVDGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVILI 133
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADR+HNM TL +P+ K++ AKET +I+ PLA+RLG+S K +LE+L F+++NP+++
Sbjct: 134 KLADRMHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINPNEY 193
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ K+ E + E + I++LE L IS + GR K YSI+ KM+ K T+
Sbjct: 194 YFIVRKISEKREEREEYIGEVIQQLENNLDRAGISSEI-DGRPKHFYSIYRKMVNKNKTI 252
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R++VE +DCY AL +VH ++ +PG+ KDYI PK N Y
Sbjct: 253 DQIFDLTAVRILVETVKDCYAALGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|443325885|ref|ZP_21054559.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
gi|442794512|gb|ELS03925.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
Length = 750
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 186/308 (60%), Gaps = 9/308 (2%)
Query: 213 YAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGAN 272
+ ++ L Q++ + + +AF A H GQ R SG+PY+ H V A LL +G +
Sbjct: 19 WLRQCLLEDQVEQSNQDRNLICRAFNFAYNLHEGQYRKSGEPYIAHPVAVAGLLRDLGGD 78
Query: 273 STVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEA 332
+AAG LHD ++D ++ + I FG V LVEGV+KLS+ N +++K +A
Sbjct: 79 CVTIAAGFLHDIVEDTDITPEQIEEMFGFEVRCLVEGVTKLSKF------NFSSTKERQA 132
Query: 333 DRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIS 391
+ MFLAMA D R +++KLADRLHNM TL+ L K++R A ET EIF PLANRLGI
Sbjct: 133 ENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEHLKPEKQRRIALETREIFAPLANRLGIG 192
Query: 392 TWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCG 449
+K +LE+LCFK+L P+ + E+ S + E EA + ++ L +++ I L L G
Sbjct: 193 RFKWELEDLCFKYLEPEAYREIQSLISERRSDREARIEKVLDTLRSQMENLGIKILELKG 252
Query: 450 RHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYI 509
R K LY I+ KM +++ +EI+DI +R+IVE E CY++L VVH + +PG+ KDYI
Sbjct: 253 RPKHLYGIYQKMQRQQKKFEEIYDIAAIRIIVEANEQCYRSLAVVHDAFKPIPGRFKDYI 312
Query: 510 TRPKFNGY 517
PK N Y
Sbjct: 313 GLPKPNRY 320
>gi|218441725|ref|YP_002380054.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7424]
gi|218174453|gb|ACK73186.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
Length = 749
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 187/316 (59%), Gaps = 11/316 (3%)
Query: 206 VEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAML 265
VE L + E L Q + + +AF A HRGQ R SG+PY+ H V A L
Sbjct: 16 VEVPLPQWLTECLLTYQSSQEQEDLSLICRAFNFAYELHRGQYRKSGEPYIAHPVAVAGL 75
Query: 266 LAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNT 325
L +G +ST++AAG LHD ++D ++ + I FG V LVEGV+KLS+ N
Sbjct: 76 LRDLGGDSTMIAAGFLHDVVEDTEVTLEEIEERFGLEVRQLVEGVTKLSKF-------NF 128
Query: 326 ASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 383
+SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L K+ R A ET EIF P
Sbjct: 129 SSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLAPEKQCRIALETREIFAP 188
Query: 384 LANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKN 441
LANRLGI +K +LE+LCFK+L P+ + E+ + + E E + E L + L
Sbjct: 189 LANRLGIGRFKWELEDLCFKYLEPEAYREIQTLVAEKRVDRETRIDKISETLRERLYQIG 248
Query: 442 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 501
+ L + GR K LY I+ KM ++ EI+DI LR++VE +E+CY+AL +VH ++ +
Sbjct: 249 VKVLEIQGRPKHLYGIYDKMQRQHKEFHEIYDIAALRILVETKEECYRALAIVHDVFKPI 308
Query: 502 PGKMKDYITRPKFNGY 517
PG+ KDYI PK N Y
Sbjct: 309 PGRFKDYIGLPKPNRY 324
>gi|123967746|ref|YP_001008604.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. AS9601]
gi|123197856|gb|ABM69497.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. AS9601]
Length = 769
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 183/291 (62%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
++ ++KAF A +AH GQ RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QNLIVKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLSEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDFRVV 173
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 409 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYLDLKDQIAVKRSDREKRLKVTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+N + CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 294 HFHEIYDVAALRIIVDNSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGY 344
>gi|307155133|ref|YP_003890517.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7822]
gi|306985361|gb|ADN17242.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7822]
Length = 750
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 182/290 (62%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A H+GQ R SG+PY+ H + A LL +G +ST++AAG LHD ++D ++
Sbjct: 42 LICRAFNFAYELHKGQYRKSGEPYIAHPIAVAGLLRDLGGDSTMIAAGFLHDVVEDTEVT 101
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I + FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 102 LEDIEQRFGDEVRQLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 154
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ L K++ A ET EIF PLANRLGI +K +LE+LCFK+L P+
Sbjct: 155 VKLADRLHNMRTLEHLATEKQRSIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPEA 214
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ + + E E + E + + L ++ L + GR K LY I+ KM +++
Sbjct: 215 YREIQALVAEKRIDRETRIEQITETIREGLHQIGVNVLEIQGRPKHLYGIYHKMQRQRKE 274
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI LR+IVE +++CY+AL +VH ++ +PG+ KDYI PK N Y
Sbjct: 275 FHEIYDIAALRIIVETKDECYRALAIVHDVFKPIPGRFKDYIGLPKSNRY 324
>gi|419718385|ref|ZP_14245704.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
gi|383305419|gb|EIC96785.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
Length = 762
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 189/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A++AH Q R SG+PYL+H + A++LA + + +AAGLLHD ++D ++
Sbjct: 48 MITKAYELAKKAHNDQKRKSGEPYLIHPICVAIILAELELDKETIAAGLLHDVIEDTVIT 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 YNELADMFGIDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+LS KL + + V I+K Q L + + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKFSQHLSATGMKY-TINGRVKHLFSIYKKMVNQNKTL 281
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IVE+ DCY AL H+++ +PG+ KDYI PK N Y
Sbjct: 282 DQIYDVFAIRIIVESVTDCYLALGTAHEIYKPIPGRFKDYIAMPKTNMY 330
>gi|169829352|ref|YP_001699510.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
gi|168993840|gb|ACA41380.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
Length = 731
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 185/289 (64%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A AH Q R+SG+PY++H V+ A +LA + + VAAG LHD ++D +
Sbjct: 27 FVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FG VA LV+GV+KL ++ L++E +A+ MF+AMA D R +LI
Sbjct: 87 RDDLVREFGEEVAVLVDGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ S + + D EA + + + +++ L + I V GR K +YSI+ KM+ +K
Sbjct: 201 YRIVSLMKKKRDEREAYLDNVMAEMKSQLNEVEIDADVY-GRPKHIYSIYRKMVLQKKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V++ +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAIRVLVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLY 308
>gi|126653971|ref|ZP_01725808.1| GTP pyrophosphokinase [Bacillus sp. B14905]
gi|126589528|gb|EAZ83670.1| GTP pyrophosphokinase [Bacillus sp. B14905]
Length = 731
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 185/289 (64%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A AH Q R+SG+PY++H V+ A +LA + + VAAG LHD ++D +
Sbjct: 27 FVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FG VA LV+GV+KL ++ L++E +A+ MF+AMA D R +LI
Sbjct: 87 RDDLVREFGEEVAVLVDGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ S + + D EA + + + +++ L + I V GR K +YSI+ KM+ +K
Sbjct: 201 YRIVSLMKKKRDEREAYLDNVMAEMKSQLNEVEIDADVY-GRPKHIYSIYRKMVLQKKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V++ +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAIRVLVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLY 308
>gi|317484827|ref|ZP_07943721.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
gi|345890061|ref|ZP_08841020.1| hypothetical protein HMPREF0178_03794 [Bilophila sp. 4_1_30]
gi|316923921|gb|EFV45113.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
gi|345038932|gb|EGW43306.1| hypothetical protein HMPREF0178_03794 [Bilophila sp. 4_1_30]
Length = 738
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 179/275 (65%), Gaps = 10/275 (3%)
Query: 246 GQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVAD 305
GQ+R SG+PYL H + A +LA +G ++ VAAGLLHDT++D ++ + + FG VAD
Sbjct: 47 GQVRLSGEPYLSHPLAVAEVLAELGFDAHSVAAGLLHDTVEDTKVTLEEVDAEFGEQVAD 106
Query: 306 LVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDA 364
+V+GV+K+S ++ ++E +A+ + M LAM+ D R ++KLADR+HNM TLD
Sbjct: 107 IVDGVTKISMMTFDSKEEQ------QAENIRKMILAMSHDIRVPIVKLADRVHNMRTLDF 160
Query: 365 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFD 422
KRQR A+ET++I+VPLANRLG+ K++LE L FK+++PD + ++S L + +
Sbjct: 161 QKAHKRQRIAQETMDIYVPLANRLGLHRLKLELEGLSFKYIHPDVYAQISDWLESNQVVE 220
Query: 423 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 482
++ I KLE L I V GR K +YSI+ KM ++ LT+D++HDI R+IV+
Sbjct: 221 RQLIAKIIAKLEGILSSNQIEGTV-WGRIKHIYSIYKKMTEQNLTLDDMHDILAFRVIVK 279
Query: 483 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ DCY L +VH W VPG+ KDYI+ PK NGY
Sbjct: 280 DVRDCYAVLGLVHAQWKPVPGRFKDYISMPKANGY 314
>gi|253578285|ref|ZP_04855557.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850603|gb|EES78561.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 776
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 191/290 (65%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH GQ R SG+PY++H + A++LA + + + AGLLHD ++D +++
Sbjct: 63 MIEKAYKVASEAHEGQKRKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMT 122
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
Y+ + + FG+ VA LV+GV+KL QLS +A K V+A+ L MFLAMA D R +L
Sbjct: 123 YEEVEKEFGSEVALLVDGVTKLGQLS------YSADKVEVQAENLRKMFLAMAKDIRVIL 176
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD
Sbjct: 177 IKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDV 236
Query: 410 HTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K L + E V + ++++++ + D NI V GR K +SI+ KM+ + T
Sbjct: 237 YYDLVHKVALRKSEREQFVGAIVKEVKKHMDDANIKAQV-DGRVKHFFSIYKKMVNQDKT 295
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D++ +R++V+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 296 IDQIYDLFAVRILVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMY 345
>gi|220907977|ref|YP_002483288.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7425]
gi|219864588|gb|ACL44927.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7425]
Length = 748
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +AF A R H+GQ RASG+PY+ H V A LL +G ++ +VAAG LHD ++D +
Sbjct: 38 ELVCRAFNFAYRLHQGQRRASGEPYIAHPVAVAGLLRDLGGSAAMVAAGFLHDVIEDTTV 97
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG V LVEGV+KLS++ N + +A+ MFLAMA D R +
Sbjct: 98 TPEQLEAEFGPEVRQLVEGVTKLSKI-------NFSKTERQAESFRRMFLAMAQDIRVIF 150
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ LP KR+R A+ET ++F PLANRLGI +K +LE+L FK+L P+
Sbjct: 151 VKLADRLHNMRTLEYLPEEKRRRIAQETRDVFAPLANRLGIWRFKWELEDLSFKYLEPEA 210
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + E EA + AI L Q L+ N+ L GR K LYSI+ KM +++
Sbjct: 211 YRRMQDLVAEKRGIREAQLEDAIAILRQQLQPLNLKRCDLSGRPKHLYSIYQKMERQQKE 270
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI +R+IVE +++CY+ L +VH + VP + KDYI PK N Y
Sbjct: 271 FHEIYDIAAIRVIVETKDECYRVLAIVHDCFKPVPNRFKDYIGLPKPNRY 320
>gi|429221371|ref|YP_007183015.1| RelA/SpoT family (p)ppGpp synthetase [Deinococcus peraridilitoris
DSM 19664]
gi|429132234|gb|AFZ69249.1| (p)ppGpp synthetase, RelA/SpoT family [Deinococcus peraridilitoris
DSM 19664]
Length = 746
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 196/315 (62%), Gaps = 31/315 (9%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D V +A++ AERAH G +R SG+PY+ H V A +LA +G ++ V AGLLHDT++D
Sbjct: 12 QDRVARAYHFAERAHDGVLRKSGEPYITHPVTVAQILADLGMDTDGVIAGLLHDTVEDTD 71
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAV 348
++++ + + FG V +VEG +K+S+L+K++ +N + +++ L M +AM D R +
Sbjct: 72 VTFEQVEQDFGVVVRRIVEGETKVSKLTKMS--SNLHDE--QSENLRQMLIAMTGDIRVI 127
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL ++P K+QR A+ETLEIF PLA+RLGI K +LE+L FK+L+PD
Sbjct: 128 IVKLADRLHNMRTLASMPAHKQQRIARETLEIFAPLAHRLGIGQIKWELEDLSFKYLDPD 187
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKM 461
+ L +L + E + A+E+L L++ + ++ + GR K LYSIH KM
Sbjct: 188 AYESLERRLRTRQSERERHIVGALEQLRATLEEDVELPEWVASTDITGRGKHLYSIHNKM 247
Query: 462 LKKKLTMDEIHDIYGLRLIV-------------ENEED------CYQALRVVHQLWAEVP 502
K+ ++++I D+ +R+I+ E ED CY AL +VH +W +P
Sbjct: 248 RKEGKSLEQIFDLLAVRVILRPKPVEAPPGKAKERAEDAREKRVCYHALGLVHSMWTPIP 307
Query: 503 GKMKDYITRPKFNGY 517
G+ KDYI PK NGY
Sbjct: 308 GRFKDYIAVPKPNGY 322
>gi|78778579|ref|YP_396691.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9312]
gi|78712078|gb|ABB49255.1| metal dependent phosphohydrolase [Prochlorococcus marinus str. MIT
9312]
Length = 769
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 183/291 (62%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
++ ++KAF A +AH GQ RASG+PY++H V A LL IGA+++V+AAGLLHD ++D
Sbjct: 60 QNLLVKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASTSVIAAGLLHDVVEDTG 119
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLSEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 409 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYKDLKDQIAVKRSDREKRLKVTLNLMKENLVSAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+N + CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 294 HFHEIYDVAALRIIVDNSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGY 344
>gi|256823641|ref|YP_003147604.1| (p)ppGpp synthetase I SpoT/RelA [Kangiella koreensis DSM 16069]
gi|256797180|gb|ACV27836.1| (p)ppGpp synthetase I, SpoT/RelA [Kangiella koreensis DSM 16069]
Length = 705
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 177/286 (61%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AERAH GQMR+SGDPY+ H V A +LA + + + A L+HD ++D +S
Sbjct: 28 RAYQLAERAHEGQMRSSGDPYITHPVAAAHILADLHLDHQTIMAALMHDVIEDCDVSKQD 87
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VADLVEGVSKL+Q+ ++E +A+ M +AM D R +LIKLA
Sbjct: 88 LSGEFGETVADLVEGVSKLTQIDFQSKEQ------AQAENFRKMMMAMTQDIRVILIKLA 141
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL AL KR+R A+ETLEI+ P+ANRLGI K QLE L F ++ P ++ L
Sbjct: 142 DRLHNMQTLGALRPDKRRRIARETLEIYAPIANRLGIYRLKEQLELLGFANMYPLRYRVL 201
Query: 414 --SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S K V + +V E+L LKD I+ V+ GR KS+YSI+ KM K T E+
Sbjct: 202 QHSVKKVRGHRKEIVERITEQLRTRLKDSRITSKVI-GREKSVYSIYKKMRDKVGTFTEV 260
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+I ++E+ CY+ L +H L+ +PG+ KDYI PK NGY
Sbjct: 261 MDIYAFRVITDSEDSCYRILGQIHNLFKPIPGRFKDYIAIPKANGY 306
>gi|256752957|ref|ZP_05493784.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748165|gb|EEU61242.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 493
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 183/289 (63%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH GQ+R SG+PY++H +E A +LA + + T +AAGLLHD ++D ++
Sbjct: 21 LIYKAYDFAVNAHDGQIRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTDVT 80
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +LI
Sbjct: 81 YGQLLEYFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILI 134
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++
Sbjct: 135 KLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEY 194
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 195 YDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTF 253
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 254 EQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|299535673|ref|ZP_07048994.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|424739057|ref|ZP_18167479.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
gi|298728873|gb|EFI69427.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|422946922|gb|EKU41324.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
Length = 731
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 185/289 (64%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A AH Q R+SG+PY++H V+ A +LA + + VAAG LHD ++D +
Sbjct: 27 FVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FG VA LV+GV+KL ++ L++E +A+ MF+AMA D R +LI
Sbjct: 87 RDDLVREFGEEVAVLVDGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ S + + D EA + + + +++ L + I + GR K +YSI+ KM+ +K
Sbjct: 201 YRIVSLMKKKRDEREAYLENVMAEMKSQLNEVEIDADIY-GRPKHIYSIYRKMVLQKKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V++ +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAIRVLVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLY 308
>gi|393200222|ref|YP_006462064.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|406667432|ref|ZP_11075190.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
gi|327439553|dbj|BAK15918.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|405384800|gb|EKB44241.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
Length = 731
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 187/289 (64%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV+KA+ A+ AH+ Q R+SG+PY++H V+ A +LA + + VAAG LHD ++D ++
Sbjct: 27 FVVKAYEVAKEAHKEQFRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTEVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + F VA LV+GV+KL ++ +++E +A+ MF+AMA D R +LI
Sbjct: 87 REDLVNEFSEEVAKLVDGVTKLGKIKYMSKEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R ++ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISQETLEIFAPLAHRLGISKVKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ S + + D EA + + ++++ LK+ I + GR K LYSI+ KM+ +K
Sbjct: 201 YRIVSLMKKKRDEREAYLDNVMDEINSQLKEVEIEADIF-GRPKHLYSIYRKMVLQKKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V++ +DCY + ++H LW +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVDSIKDCYAVIGIIHTLWKPMPGRFKDYIAMPKQNLY 308
>gi|315651813|ref|ZP_07904817.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485943|gb|EFU76321.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 762
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 189/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A++AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 48 MITKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTVIT 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 YNELADMFGIDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+LS KL + + V I+K Q L + + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKFSQHLSATGMKY-TINGRVKHLFSIYKKMVNQNKTL 281
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IVE+ DCY AL H+++ +PG+ KDYI PK N Y
Sbjct: 282 DQIYDVFAIRIIVESVTDCYLALGTAHEIYKPIPGRFKDYIAMPKTNMY 330
>gi|260892286|ref|YP_003238383.1| (p)ppGpp synthetase I SpoT/RelA [Ammonifex degensii KC4]
gi|260864427|gb|ACX51533.1| (p)ppGpp synthetase I, SpoT/RelA [Ammonifex degensii KC4]
Length = 710
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 189/311 (60%), Gaps = 11/311 (3%)
Query: 210 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 269
+E Y +E LA + + E + KAF A+ H GQ R SG+P+L H V A +LA +
Sbjct: 1 MELY-EELLAQVKAYNPGVNEALLRKAFDFAQAKHAGQRRFSGEPFLSHPVAVARILAEL 59
Query: 270 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 329
++ + AGLLHD ++D + + I FGA +A LV+GV+KLS+L ++E
Sbjct: 60 ELDTETIVAGLLHDVVEDTGTTLEEIEHEFGAEIAALVDGVTKLSRLQFRSQEEQ----- 114
Query: 330 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 388
+A+ L MF+AMA D R VLIKLADRLHN+ TL LP K++ AKETLEIF PLA+RL
Sbjct: 115 -QAENLRKMFVAMAKDVRVVLIKLADRLHNLRTLQYLPPEKQRAIAKETLEIFAPLAHRL 173
Query: 389 GISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLV 446
GI K +LE+L F++L P+++ EL++K+ + E I L++ L++ I
Sbjct: 174 GIYRLKWELEDLAFRYLEPERYRELAAKVAKTRAAREEYTRELIAILQKRLEEAGIK-AE 232
Query: 447 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 506
L GR K+LYSI+ KML+ EI+D G+R +VE DCY L VVH LW VPG+ K
Sbjct: 233 LMGRPKNLYSIYQKMLRDGKEYSEIYDRTGIRALVETVRDCYAVLGVVHTLWKPVPGRFK 292
Query: 507 DYITRPKFNGY 517
DYI PK N Y
Sbjct: 293 DYIAMPKENMY 303
>gi|384440422|ref|YP_005655146.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
gi|359291555|gb|AEV17072.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
Length = 726
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 193/306 (63%), Gaps = 24/306 (7%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V A+ AE AHRGQ+R SG+PY+ H V A +LA++ ++ VAAGLLHDT++D ++
Sbjct: 26 VKAAYLFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDAETVAAGLLHDTVEDCGVAP 85
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + R FG GV +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 86 EELERRFGPGVRRIVEGETKVSKLYKLA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLGI K +LE+L F++L+P+ +
Sbjct: 143 LADRLHNLRTLEHMPPHKQRRIAQETLEIYAPLAHRLGIGQLKWELEDLSFRYLHPEAYH 202
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKK 464
L S++ E + E ++ A+ LE+AL+ + + GR K LYSI KM ++
Sbjct: 203 ALLSRIQETQEARERVIHRAMAILEEALRKDELLQAQLQGFEVTGRPKHLYSIWKKMERE 262
Query: 465 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 511
+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 263 GKALEQIYDLLAVRVILDPKPAPTEEGQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 322
Query: 512 PKFNGY 517
PK NGY
Sbjct: 323 PKPNGY 328
>gi|266623547|ref|ZP_06116482.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
gi|288864647|gb|EFC96945.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
Length = 779
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 202/310 (65%), Gaps = 9/310 (2%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E +E +A+ + H + KA++ A+ H+ Q R SG+PY++H + A++LA +
Sbjct: 44 EVLYQELIASIRRYHPSDDISMIEKAYHVADNFHKEQKRKSGEPYIIHPLCVAIILADLE 103
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 330
+ +AAG+LHD ++D ++ D + + FG VA LV+GV+KL+QLS + +
Sbjct: 104 MDKETIAAGILHDVVEDTVMTLDELGKEFGEEVALLVDGVTKLTQLSW-----SMDKMEL 158
Query: 331 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 389
+A+ L MFLAMA D R ++IKLADRLHNM TL + K++ A+ET+EI+ P+A+RLG
Sbjct: 159 QAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKPEKQKEKARETMEIYAPIAHRLG 218
Query: 390 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVL 447
IS K++L++L K+L PD + +L+ K+ D E+ V S ++++++ LK+ +I V
Sbjct: 219 ISKIKIELDDLSLKYLQPDVYYDLAEKISLKKDARESFVKSIVDEVQEHLKEASIVAKV- 277
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+L+ +PG+ KD
Sbjct: 278 DGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIVDSVKDCYAALGVIHELYKPIPGRFKD 337
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 338 YIAMPKPNMY 347
>gi|427717556|ref|YP_007065550.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 7507]
gi|427349992|gb|AFY32716.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 7507]
Length = 756
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 179/290 (61%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A R H+GQ R SG+PY+ H V A LL +G ++ ++AAG LHD ++D ++
Sbjct: 43 LIGEAFKFAYRLHQGQYRKSGEPYICHPVAVAGLLRDLGGSAAMIAAGFLHDVVEDTDVT 102
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FG V LVEGV+KLS++ N SKT +A+ MFL+MA D R ++
Sbjct: 103 IEQIGELFGPEVRQLVEGVTKLSKI-------NFKSKTESQAENFRRMFLSMAQDIRVIV 155
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL +P KR+R A+ET +IF PLANRLGI +K +LE+L FK+L P+
Sbjct: 156 VKLADRLHNMRTLQVMPDDKRRRIAQETRDIFAPLANRLGIWHFKWELEDLSFKYLEPES 215
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
E+ + E E + A L++ LK I L + GR K LYSI+ KM +++
Sbjct: 216 FREIQQHVAEKRTSREEKLARATTILQERLKQAGIECLDVSGRPKHLYSIYQKMQRQQKE 275
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 276 FHEIYDLAALRIIVRTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 325
>gi|94499848|ref|ZP_01306384.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bermanella marisrubri]
gi|94428049|gb|EAT13023.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Oceanobacter sp. RED65]
Length = 710
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 184/290 (63%), Gaps = 14/290 (4%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+Y AE+AH GQ R SGDPY++H + A +L+ + +S + A +LHD ++D +
Sbjct: 23 VCRAYYYAEQAHEGQFRRSGDPYIVHPLAVANILSEMHMDSQSLMAAMLHDVIEDTAVPK 82
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
D + FG V++LV+GVSKL+ + ++E +A M +AMA D R +L+K
Sbjct: 83 DALKDQFGETVSELVDGVSKLTHIKFESQEEK------QAGNFQKMAMAMAKDIRVILVK 136
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P K++R A ETLEI+ P+ANRLGIS +++LE+LCF +P +
Sbjct: 137 LADRLHNMRTLSAMPPEKKRRIAGETLEIYAPIANRLGISNIRIELEDLCFNAKHP-MRS 195
Query: 412 ELSSKLVECFDEAMVTSAIEKLEQA----LKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ K V+ + +EK+ QA LK++ + V+ GR K LYSI+ KM ++K +
Sbjct: 196 NMIKKAVKSA-RGNRSELVEKINQALKTRLKEEGLKTRVM-GREKHLYSIYRKMKEQKKS 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I D+YG R+IV+N + CY+AL +VH + VPG+ KDYI PK NGY
Sbjct: 254 FKQIMDVYGFRIIVDNVDSCYRALGIVHNFYKPVPGRFKDYIAIPKSNGY 303
>gi|392412123|ref|YP_006448730.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
gi|390625259|gb|AFM26466.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
Length = 737
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 188/313 (60%), Gaps = 17/313 (5%)
Query: 208 GNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 267
G ++ K + +A L D + A+ + + H GQ R SG+PYL+H V +M+LA
Sbjct: 27 GEIQDLVKSYYPDADL-------DLIRAAYVYSAQVHLGQTRRSGEPYLVHPVAVSMILA 79
Query: 268 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 327
+ + VA GLLHDT++D + + I R FG +A LV+GV+K+S++ ++E
Sbjct: 80 QMKLDEASVATGLLHDTVEDTLATLEEIERFFGKEIAALVDGVTKISKIEFQSKEER--- 136
Query: 328 KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 386
+A+ M LAM+ D R +++KLADRLHNM TL +P + R A+ETL+I+ PLA
Sbjct: 137 ---QAENFRKMILAMSRDIRVLMVKLADRLHNMRTLGPMPPDAQVRIARETLDIYAPLAA 193
Query: 387 RLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISF 444
RLGI + +LE+L F+++NP++++ ++ +L E E + + + + ++ NI
Sbjct: 194 RLGIYWMRTELEDLAFRYVNPERYSTIARRLEESLKQREEYANNVLRIITEKIEQYNIKG 253
Query: 445 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 504
+ GR+K ++SIH KM+ + L D+IHD+ R+I+ N +CY L ++H LW VPG+
Sbjct: 254 -TIKGRNKEIFSIHQKMITQHLDFDQIHDLTAFRIILNNVSECYAVLGLIHSLWRPVPGR 312
Query: 505 MKDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 313 FKDYIAMPKSNGY 325
>gi|326201899|ref|ZP_08191769.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
gi|325987694|gb|EGD48520.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
Length = 726
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 182/286 (63%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ ++ AH GQ R SG+PY++H VE A++LA I + T + A LLHDT++D +YD
Sbjct: 26 KAYSVSKAAHMGQQRISGEPYIIHPVEVAIILAEIELDCTALVAALLHDTIEDTTCTYDQ 85
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA+LV+GV+KL ++ +E + + L MFLAMA D R ++IKLA
Sbjct: 86 LKAQFGQEVAELVDGVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLA 139
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL+ + K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L
Sbjct: 140 DRLHNMRTLNYMTQDKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDL 199
Query: 414 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K+ EA +T I+ L + + I + GR K YSI+ KM+K+ T+D+I
Sbjct: 200 VEKINTKRKQREAYITIIIDTLREKTNELRIENAQIDGRPKHFYSIYRKMVKQNKTLDQI 259
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ R+IV + +DCY L +VH+L+ +PG+ KDYI PK N Y
Sbjct: 260 YDLFAFRIIVNSVKDCYAVLGLVHELYKPMPGRFKDYIAMPKPNMY 305
>gi|320449341|ref|YP_004201437.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
gi|320149510|gb|ADW20888.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
Length = 667
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 193/306 (63%), Gaps = 24/306 (7%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ AE AHRGQ+R SG+PY+ H V A +LA++ ++ V AGLLHDTL+D ++
Sbjct: 26 VREAYRFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDADTVMAGLLHDTLEDCGVAP 85
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + R FG V LVEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 86 EELERRFGPAVRRLVEGETKVSKLYKLA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ +
Sbjct: 143 LADRLHNLRTLEHMPPEKQRRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAYH 202
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKK 464
L S++ E + E ++ A+ LE+AL+ + L + GR K LYSI KM ++
Sbjct: 203 ALLSRIQETQEAREQIIRKAMVALEEALRRDELLQAQLQGLEVTGRPKHLYSIWKKMERE 262
Query: 465 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 511
+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 263 GKALEQIYDLLAVRVILDPKPAPTEEGRALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 322
Query: 512 PKFNGY 517
PK NGY
Sbjct: 323 PKPNGY 328
>gi|291535022|emb|CBL08134.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
M50/1]
Length = 770
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 193/310 (62%), Gaps = 9/310 (2%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E E +A+ + H + KA++ A AH GQ R SG+PY++H + A++LA +
Sbjct: 32 EKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILAELE 91
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 330
+ + AGLLHD ++D ++ + I + FG VA LV+GV+KL QLS + V
Sbjct: 92 LDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVDGVTKLGQLS-----YDADKVEV 146
Query: 331 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 389
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLG
Sbjct: 147 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPIAQRLG 206
Query: 390 ISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVL 447
IS K++L++L K+L PD + +L ++ + + V +E++ Q +KD I V
Sbjct: 207 ISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKDAGIPAQV- 265
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KD
Sbjct: 266 DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRFKD 325
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 326 YIAMPKPNMY 335
>gi|300856534|ref|YP_003781518.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
gi|300436649|gb|ADK16416.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
Length = 725
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 181/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+Y A+ AH+ Q R SG+PY+ H VE A +L +G +++ + AGLLHD ++D S
Sbjct: 20 IVEKAYYFADEAHKKQKRESGEPYISHPVEVAYILVEMGLDTSTIVAGLLHDVIEDTQFS 79
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ I R F VA+LVEGV+KL ++ +E +AD + M LAMA D R +LI
Sbjct: 80 YEDIKREFSVEVANLVEGVTKLGKIECKTKEEQ------QADNVRKMLLAMADDIRVILI 133
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL +P+ K++ AKET +I+ PLA+RLG+S K +LE+L F+++N +++
Sbjct: 134 KLADRLHNMRTLKYMPVKKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINQNEY 193
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ K+ E E + I +L+ LK I + GR K YSI+ KM+KK T+
Sbjct: 194 YFIVRKIAEKRVEREKYIDEIISQLKDNLKKSGIDSDI-EGRPKHFYSIYRKMVKKNKTI 252
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R++V +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 253 DQIFDLTAVRILVNTVKDCYAALGIAHTIYKPMPGRFKDYIAMPKPNMY 301
>gi|291539586|emb|CBL12697.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
XB6B4]
Length = 770
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 193/310 (62%), Gaps = 9/310 (2%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E E +A+ + H + KA++ A AH GQ R SG+PY++H + A++LA +
Sbjct: 32 EKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILAELE 91
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 330
+ + AGLLHD ++D ++ + I + FG VA LV+GV+KL QLS + V
Sbjct: 92 LDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVDGVTKLGQLS-----YDADKVEV 146
Query: 331 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 389
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLG
Sbjct: 147 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPIAQRLG 206
Query: 390 ISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVL 447
IS K++L++L K+L PD + +L ++ + + V +E++ Q +KD I V
Sbjct: 207 ISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKDAGIPAQV- 265
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KD
Sbjct: 266 DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRFKD 325
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 326 YIAMPKPNMY 335
>gi|302391503|ref|YP_003827323.1| (p)ppGpp synthetase I SpoT/RelA [Acetohalobium arabaticum DSM 5501]
gi|302203580|gb|ADL12258.1| (p)ppGpp synthetase I, SpoT/RelA [Acetohalobium arabaticum DSM
5501]
Length = 734
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 187/290 (64%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A+ AH GQ R SG+P++ H + A+++A + + + LLHD ++D +
Sbjct: 33 ELITKAYKFAKDAHEGQYRVSGEPFVEHPLGVALIMAELELDIISITGALLHDVVEDTEV 92
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S+ + FG + LV GV+KLS+++ +RE +A+ L MFLAM+ D R +L
Sbjct: 93 SFAQLRNEFGEEITLLVNGVTKLSKIAFKSREEQ------QAESLRKMFLAMSKDIRVIL 146
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKL+DRLHNM TL+ L K++R A+ET+EI+ PLA+RLGIST K +LE+L FKHL P++
Sbjct: 147 IKLSDRLHNMRTLEYLSQQKQERIARETIEIYAPLAHRLGISTLKWELEDLSFKHLEPNK 206
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ELS+K+ + D E + I K+E+ L + I + GR K LYSI+ KM +K
Sbjct: 207 YYELSNKVSKNRDEREEYIDRCISKVEKRLNLEGIDAHIY-GRPKHLYSIYQKMKRKNKE 265
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ LR+IV + ++CYQ L +H++W +PG++KDYI PK N Y
Sbjct: 266 LSEIYDLVALRVIVNDVQECYQVLGNIHEIWNPIPGRIKDYIAMPKSNMY 315
>gi|440780767|ref|ZP_20959238.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
pasteurianum DSM 525]
gi|440221355|gb|ELP60560.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
pasteurianum DSM 525]
Length = 736
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 183/291 (62%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
++F+ KA+ A AH+ Q R SG+PY++H E A +LA +G + +AAGLLHD ++D
Sbjct: 18 KNFINKAYNFAMNAHKKQKRESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTE 77
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+++ + R F VA+LVEGV+KL ++S +E +AD + M LAMA D R +
Sbjct: 78 YTHEDLTREFNGEVANLVEGVTKLGKISYKTKEEQ------QADNVRKMLLAMAKDIRVI 131
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKL+DRLHNM TL + K++ AKETL+IF PLA+RLGIS K +LE+L F+++ P+
Sbjct: 132 LIKLSDRLHNMRTLKYMSASKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYIKPN 191
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ EL + E E + I +L + L+D NI + GR K YSI+ KM+ K
Sbjct: 192 EYYELVDDIAEKRVEREEYIRGIISELYKNLEDANI-MADIDGRPKHFYSIYRKMVNKNK 250
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I D+ +R++V + +CY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 TLDQIFDLTAIRILVNDIRECYTVLGIVHTMYKPIPGRFKDYIAMPKPNMY 301
>gi|240143890|ref|ZP_04742491.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
gi|257204082|gb|EEV02367.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
Length = 774
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 193/310 (62%), Gaps = 9/310 (2%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E E +A+ + H + KA++ A AH GQ R SG+PY++H + A++LA +
Sbjct: 36 EKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILAELE 95
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 330
+ + AGLLHD ++D ++ + I + FG VA LV+GV+KL QLS + V
Sbjct: 96 LDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVDGVTKLGQLS-----YDADKVEV 150
Query: 331 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 389
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLG
Sbjct: 151 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPIAQRLG 210
Query: 390 ISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVL 447
IS K++L++L K+L PD + +L ++ + + V +E++ Q +KD I V
Sbjct: 211 ISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKDAGIPAQV- 269
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KD
Sbjct: 270 DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRFKD 329
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 330 YIAMPKPNMY 339
>gi|428223952|ref|YP_007108049.1| (p)ppGpp synthetase I SpoT/RelA [Geitlerinema sp. PCC 7407]
gi|427983853|gb|AFY64997.1| (p)ppGpp synthetase I, SpoT/RelA [Geitlerinema sp. PCC 7407]
Length = 763
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 175/290 (60%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A H GQ RASG+PY+ H V A LL +G + ++AAG LHD ++D ++
Sbjct: 49 LICRAFCFAYELHEGQFRASGEPYIAHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 108
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
D I FG V +VEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 109 ADEIEERFGPEVRQMVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 161
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ LP KR+R A ET EIF PLANRLGI K +LE+L FK+L PD
Sbjct: 162 VKLADRLHNMRTLEHLPDVKRRRIAMETREIFAPLANRLGIGRVKWELEDLAFKYLEPDA 221
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ S + E E + + L + I + + GR K LYSI+ KM ++
Sbjct: 222 YRQMQSLVSEKRGSREDRIAQVTDVLRDRMAQSGIRCVDISGRPKHLYSIYQKMQRQHKE 281
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI DI +R+IVE+ E+CY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 282 FHEIFDIAAIRIIVESNEECYRALAIVHDAFKPIPGRFKDYIGLPKPNRY 331
>gi|157412548|ref|YP_001483414.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9215]
gi|157387123|gb|ABV49828.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9215]
Length = 769
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 182/291 (62%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
++ + KAF A +AH GQ RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QNLIAKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLYEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 409 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYLDLKDQIAVKRSDREKRLKLTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+N + CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 294 HFHEIYDVAALRIIVDNSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGY 344
>gi|404482346|ref|ZP_11017573.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
gi|404344507|gb|EJZ70864.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
Length = 761
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 189/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A++AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D +S
Sbjct: 48 MISKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAIS 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
++ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 FEELSNIFGVDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+LS KL + + V I+K + L D + + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKFNEHLSDTGMKYQI-SGRVKHLFSIYKKMVNQNKTL 281
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IVE+ CY AL H+++ +PG+ KDYI PK N Y
Sbjct: 282 DQIYDVFAIRIIVEDVAACYLALGTAHEIYKPIPGRFKDYIAMPKPNMY 330
>gi|37522317|ref|NP_925694.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
gi|35213317|dbj|BAC90689.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
Length = 758
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 185/290 (63%), Gaps = 12/290 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A R H GQ RASG+PY+LH V+ A +L +G++S +VAAG LHD ++D +
Sbjct: 59 LIARAFDFAYRLHTGQNRASGEPYILHPVQVAGMLRELGSDSAMVAAGFLHDIIEDTATT 118
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + + FG V LVEGV+KLS+ + ++E +A+ MFLAMA D R +++
Sbjct: 119 SEDLEQLFGEQVRLLVEGVTKLSKFTFDSKEER------QAENFRRMFLAMAQDIRVIVV 172
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD LP K++R A+ET++IF PLANRLGI +K +LE+L FK+L+PD +
Sbjct: 173 KLADRLHNMRTLDFLPTHKQRRIAQETMDIFAPLANRLGIWRFKWELEDLAFKYLDPDAY 232
Query: 411 TELSSKLV---ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ KLV E + ++ + + ++I + GR K L+ I+ KM +++
Sbjct: 233 RHM-QKLVSQKRAEREQFIDQVVQTIRAEIDRQHIHGEI-TGRPKHLWGIYQKMQRQQKE 290
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IVE +E+CY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 291 FHEIYDVSAVRIIVEQQEECYRALSIVHNKFRPIPGRFKDYIGLPKPNRY 340
>gi|168187498|ref|ZP_02622133.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
gi|169294579|gb|EDS76712.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
Length = 729
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 186/291 (63%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D +IKA+ A+ AH+ Q R SG+PY++H VE A +LA +G + +AA LLHD ++D
Sbjct: 18 KDIIIKAYNYAKNAHKKQKRISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTD 77
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+Y+ + R F + VA+LVEGV+KL ++ +E +++ + M LAM D R +
Sbjct: 78 YTYEDVERDFNSEVANLVEGVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVI 131
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL + + K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+
Sbjct: 132 LIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNPN 191
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L K+ E E + I +L++ L + I + GR K YSI+ KM+ K
Sbjct: 192 EYYDLVRKVAEKRKEREEYIERIIHELKEKLDEAGIKSEI-EGRPKHFYSIYRKMVIKNK 250
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I D+ +R++VE+ +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 TIDQIFDLTAVRILVEDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMY 301
>gi|337288950|ref|YP_004628422.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfobacterium sp. OPB45]
gi|334902688|gb|AEH23494.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfobacterium geofontis
OPF15]
Length = 725
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/292 (45%), Positives = 183/292 (62%), Gaps = 12/292 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A R H GQMR SG+PYL H +E A +LA + + +AAGLLHD ++D+ +S
Sbjct: 22 IVEKAYEWAARIHEGQMRKSGEPYLSHPMEVAYILAQMKLDLPTIAAGLLHDVVEDSQVS 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG VA +V+GV+KL L ++ T +A+ L + AM+ D R +L+
Sbjct: 82 IEDIKKEFGEEVAFIVDGVTKLKNLP-----SSVDKLTQQAESLRKIIFAMSKDLRVILV 136
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ KRQR AKETLEI+ PLA RLGI K +LE+L FK+L P ++
Sbjct: 137 KLADRLHNMRTLEYQAEHKRQRIAKETLEIYAPLAGRLGIDWVKCELEDLAFKYLYPKEY 196
Query: 411 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
L ++ + EA V + + LE+ L+ NI VL GR K LYS++ K+ K LT+
Sbjct: 197 ERLKIEVEKRVKEAKEYVENVKKILEELLEKNNIKGKVL-GRVKHLYSVYKKLQKYNLTI 255
Query: 469 DE---IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE I+D+ G R+IV E+CY+ L +VH LW +PG+ KDYI+ PK N Y
Sbjct: 256 DELDQIYDLIGFRIIVNTVEECYKTLGLVHTLWTPIPGRFKDYISLPKPNMY 307
>gi|126660186|ref|ZP_01731304.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
gi|126618551|gb|EAZ89302.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
Length = 744
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/291 (43%), Positives = 181/291 (62%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H V A +L +G + ++AAG LHD ++D +
Sbjct: 37 DLICRAFNFAYKLHEGQARKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVVEDTDV 96
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG VA LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 97 TVEEIEEMFGHEVALLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVI 149
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L K++R A+ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 150 VVKLADRLHNMRTLEPLRPEKQRRIARETKEIFAPLANRLGIWRVKWELEDLSFKYLEPE 209
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ E+ + + E E + + L++ L D IS L L GR K LY I+ KM ++
Sbjct: 210 DYREIQNLISEKRIDRETRIETVKNTLQKRLDDMGISILELQGRPKHLYGIYFKMQRQNK 269
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY+AL VVH ++ +PG+ KDYI PK N Y
Sbjct: 270 GFHEIYDLAALRIIVKTNEECYRALAVVHDVFKPMPGRFKDYIGLPKPNRY 320
>gi|385799597|ref|YP_005836001.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium praevalens DSM 2228]
gi|309388961|gb|ADO76841.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium praevalens DSM
2228]
Length = 715
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 188/290 (64%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ AE+AH+ Q R SG+P++ H + +++LA + + + + LLHD ++D +
Sbjct: 20 DLVKKAYSYAEKAHKEQYRVSGEPFVEHPLGVSIILAELELDIVSIVSSLLHDVVEDTSV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S I + FGA VA +V+GV+KL+++ + + +A+ L MF+AMA D R VL
Sbjct: 80 SSQEIEKEFGAEVAHIVDGVTKLTRMQFKTKADQ------QAESLRKMFVAMAEDIRVVL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ L KR+ ++ET+EI+ PLA+RLG+S K +LE+L F++L PD
Sbjct: 134 IKLADRLHNMRTLNYLKKAKRKEKSRETIEIYAPLAHRLGMSKIKWELEDLSFRYLKPDM 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+S K+ E + AIEKL L+ +I + GR K LYSI+ KM +K++
Sbjct: 194 YYEISHKVQANRKQREKDIKEAIEKLNLTLESHSIEADIY-GRPKHLYSIYNKMKRKEVE 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R++VEN ++CY+ L V+H++W +PG+ KDYI PK N Y
Sbjct: 253 FDEIYDLTAVRVLVENVKECYEVLGVLHEIWKPMPGRFKDYIAMPKSNMY 302
>gi|357634035|ref|ZP_09131913.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
gi|357582589|gb|EHJ47922.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
Length = 738
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 182/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH GQ+R SG+PYL H +E A +LA + ++ VAAGLLHDT++D +
Sbjct: 22 IITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLDAASVAAGLLHDTVEDTKAT 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VAD+V+GV+K+S + ++E +A+ + M LAMA D R VL+
Sbjct: 82 VDEIEELFGDEVADIVDGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ KR A+ET++I+ PLANRLG+ K +LE+L FK+L PD +
Sbjct: 136 KLADRLHNMRTLEFQKPVKRALIAQETMDIYAPLANRLGLHRIKTELEDLSFKYLKPDVY 195
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+++ + + DE+ + I ++ Q + + NI ++ GR K L+S+ KM + LT+
Sbjct: 196 SQIKAGVDRHHTLDESYIERVIGQIRQMVGENNIKARII-GRRKHLWSVFNKMRVQGLTI 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++HD+ R++VE +CY L +VH +W VPG+ KDYI+ PK N Y
Sbjct: 255 DQVHDLVAFRVLVETIRECYSVLGLVHSIWKPVPGRFKDYISMPKANMY 303
>gi|302387920|ref|YP_003823742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium saccharolyticum WM1]
gi|302198548|gb|ADL06119.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
Length = 774
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 190/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA++ AE AH+ Q R SG+PY++H + A++LA + + +AAG+LHD ++D +S
Sbjct: 60 MIEKAYHIAEEAHKDQRRKSGEPYIIHPLCVAIILADLEMDKETIAAGILHDVVEDTIMS 119
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA LV+GV+KL+Q+S + ++A+ L MFLAMA D R ++I
Sbjct: 120 LDELKAEFGEEVALLVDGVTKLTQISW-----SMDKMEIQAENLRKMFLAMAKDIRVIII 174
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ AKET+EI+ P+A+RLGIS K++L++L ++L P+ +
Sbjct: 175 KLADRLHNMRTLQYMKPEKQKEKAKETMEIYAPIAHRLGISKIKIELDDLSLRYLQPEIY 234
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
EL+ K+ D E V S +++++ L+ I V GR K +SI+ KM+ + T+
Sbjct: 235 YELAEKISLKKDARETFVKSIVDEVQDHLRSGGIEARV-DGRVKHFFSIYKKMVNQNKTL 293
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 294 DQIYDLFAVRIIVDSVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMY 342
>gi|359412257|ref|ZP_09204722.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
gi|357171141|gb|EHI99315.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
Length = 736
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 185/294 (62%), Gaps = 15/294 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V +A+ AE+AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 DMVKRAYNFAEKAHKEQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDC 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SYD F A +ADLV+GV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SYDETVNLFNAEIADLVDGVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ EL + E + + +V+ EKLE A +I GR K YSI+ KM+
Sbjct: 196 YYELVDSIAEKRVERETYIKDIVSDLEEKLEAAGIQSDID-----GRPKHFYSIYKKMVS 250
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 KNKSIEQIFDLTAIRVLVNSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMY 304
>gi|253682203|ref|ZP_04863000.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
gi|253561915|gb|EES91367.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
Length = 730
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 185/295 (62%), Gaps = 18/295 (6%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D +IKA+ AE AH+ Q R SG+PY++H VE A +LA +G + +AA LLHD ++D
Sbjct: 18 KDIIIKAYNYAENAHKEQKRISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTD 77
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+Y+ + + F VA+LVEGV+KL ++ +E +++ + M LAM D R +
Sbjct: 78 YTYEDVEKDFNIEVANLVEGVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVI 131
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL + + K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+
Sbjct: 132 LIKLADRLHNMRTLKYMSVEKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLNPN 191
Query: 409 QHTELSSKLVEC------FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
++ +L K+ E + E ++ EKLE+A I GR K YSI+ KM+
Sbjct: 192 EYYDLVRKVAEKRKEREEYIERIIHELSEKLEEAGIKSEIE-----GRPKHFYSIYRKMV 246
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K T+D+I D+ +R++VE+ +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 247 IKNKTIDQIFDLTAIRILVEDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMY 301
>gi|452995059|emb|CCQ93294.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 723
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 186/307 (60%), Gaps = 17/307 (5%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
AKE++++ +L D V KA+ AE+AH GQ+RASGDPY+ H + A +LA + +
Sbjct: 10 AKEYMSDDEL-------DMVRKAYLFAEKAHEGQLRASGDPYITHPLAVAGILADLHMDH 62
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+++A LLHD ++D + D + + FG VA+LV+GV+KL ++ ++E +A+
Sbjct: 63 VILSAALLHDVVEDTHATLDQVRQEFGVEVAELVDGVTKLRRIKYKSQEEQ------QAE 116
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
M LAMA D R +LIKLADRLHNM TL ++R A ETLEIF P+A+RLGIST
Sbjct: 117 NHRKMLLAMAKDVRVILIKLADRLHNMRTLKYRSEEDQRRIANETLEIFAPIAHRLGIST 176
Query: 393 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE++ +++NP Q+ + K E + +E++ L+D I + GR
Sbjct: 177 IKWELEDISLRYINPQQYYRIVHLMKKKRAEREKYIEKVMEEIRVKLEDLGIK-CDISGR 235
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +YSI+ KM + +EI+D+ +R+IVEN DCY L VVH LW +PG+ KDYI
Sbjct: 236 PKHIYSIYRKMFLQHKEFNEIYDLLAIRIIVENVRDCYAVLGVVHTLWKPMPGRFKDYIA 295
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 296 MPKANLY 302
>gi|407004719|gb|EKE21022.1| hypothetical protein ACD_7C00380G0002 [uncultured bacterium]
Length = 497
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 185/294 (62%), Gaps = 12/294 (4%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + +IKAF AE++H+GQ R SG+ Y HC+ TA +LA+IG S +AAGLLHD +D
Sbjct: 23 RRELIIKAFEFAEKSHQGQKRKSGEDYFKHCIATANILASIGMGSKTIAAGLLHDVPEDT 82
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLS-KLARENNTASKTVEADRLHTMFLAM-ADAR 346
++ I + FG + +LVEG++KL ++ K +E + L MFLAM AD R
Sbjct: 83 PITLTEIKKEFGEDIHNLVEGITKLGKIKLKETKEEYL------IENLRKMFLAMAADIR 136
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
V+IKLADRLHNM TL+ P KR R A+ET+EI+VP+A+RLGI K +LE+L FK ++
Sbjct: 137 VVIIKLADRLHNMRTLEFNPPEKRPRIARETMEIYVPIADRLGIGEIKAELEDLSFKFID 196
Query: 407 PDQHTELSSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
P + + KL + + E AI +LE+ ++ + I + GR K+L S+ K+ K
Sbjct: 197 PKNY-RMVKKLRDDYYKEGEKFNNQAIRELEKEIRGRKIKIAKIYGRAKNLRSLFLKLEK 255
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ + I+D+ +R++V DCY+ L + H+++ + G++KDYI+ PK NGY
Sbjct: 256 REMDIGRIYDLIAIRIVVPTVSDCYEVLGITHKVYRPMVGRIKDYISLPKPNGY 309
>gi|402313175|ref|ZP_10832096.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
gi|400366935|gb|EJP19955.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
Length = 761
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 189/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A++AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D +S
Sbjct: 48 MISKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAIS 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
++ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 FEELSDIFGVDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+LS KL + + V I+K + L D + + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKFNEHLSDTGMKYQI-SGRVKHLFSIYKKMVNQNKTL 281
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IVE+ CY AL H+++ +PG+ KDYI PK N Y
Sbjct: 282 DQIYDVFAIRIIVEDVAACYLALGTAHEIYKPIPGRFKDYIAMPKPNMY 330
>gi|303248713|ref|ZP_07334966.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
gi|302489878|gb|EFL49806.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
Length = 750
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 183/289 (63%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH GQ+R SG+PYL H +E A LLA + ++ +AAGLLHDT++D +
Sbjct: 29 LLTKAYVFSAAAHAGQVRLSGEPYLSHPLEVAGLLADMRLDAASIAAGLLHDTVEDTKAT 88
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VAD+V+GV+K+S + ++E +A+ + M LAMA D R VL+
Sbjct: 89 VDEVEELFGDDVADIVDGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ K+ R A+ET++I+ PLANRLG+ K +LE++ FK+L PD +
Sbjct: 143 KLADRLHNMRTLEFQKPYKQARIAQETMDIYAPLANRLGLHRIKTELEDISFKYLKPDVY 202
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++ + + DE+ + I ++++ L+ +I + GR K L+S+ KM + LT+
Sbjct: 203 NQIKTGVDRHRTLDESYIERVISQVKELLRPNHIRARIF-GRRKHLWSVFNKMRVQGLTL 261
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++HD+ R+IVEN +CY L +VH +W VPG+ KDYI+ PK N Y
Sbjct: 262 DQVHDLVAFRVIVENIRECYAVLGLVHSIWKPVPGRFKDYISMPKANMY 310
>gi|225386906|ref|ZP_03756670.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
gi|225046918|gb|EEG57164.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
Length = 762
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 186/286 (65%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A+ AHR Q R SG+PY++H + A++LA + + + AGLLHD ++D +S D
Sbjct: 48 KAYRVAKEAHREQKRKSGEPYIIHPLCVAIILADLEMDKETIEAGLLHDVVEDTAMSLDE 107
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG V+ LV+GV+KL+QLS + ++AD L MFLAMA D R ++IKLA
Sbjct: 108 LAKQFGTEVSFLVDGVTKLTQLSW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLA 162
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K+L P+ + +L
Sbjct: 163 DRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKYLKPEVYYDL 222
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K+ D EA V +++++Q +KD I + GR K +SI+ KM+ + T+D+I
Sbjct: 223 VEKVSLRKDAREAFVQEIVDEVKQHMKDAGIE-AAIGGRVKHFFSIYKKMVNQNKTLDQI 281
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ +R++VE +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 282 YDLFAVRIMVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMY 327
>gi|323142303|ref|ZP_08077135.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413187|gb|EFY04074.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
Length = 754
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 185/306 (60%), Gaps = 17/306 (5%)
Query: 215 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
+E+LA Q+ FV KA+ A +AH Q R SG+PY++H + +L + +
Sbjct: 26 EEYLAPEQVA-------FVRKAYELAAKAHAAQTRKSGEPYIIHPIGVVSILVGLQMDDK 78
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 334
+AA LHD ++D DYI FG VA+LV+GV+KL ++ +++E+ + +
Sbjct: 79 TLAAAFLHDVVEDTDYKLDYIKEQFGTVVANLVDGVTKLGKIEYISKEDR------QIEN 132
Query: 335 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 393
MFLAMA D R VLIKLADRLHNM T+ +P+ K+Q ++ETLEI+ PLA+RLGI T
Sbjct: 133 YRKMFLAMARDIRVVLIKLADRLHNMRTMKYMPVHKQQSISRETLEIYAPLAHRLGIYTI 192
Query: 394 KVQLENLCFKHLNPDQHTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRH 451
K +LE+L F+++ PD + +L K+ E M+ A+ L+ A++ I + GR
Sbjct: 193 KWELEDLAFRYMEPDIYYDLVEQVKIKRREREDMINEAMTTLKDAVEKAGIR-CEIQGRP 251
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K+ YSIH KML+ + EI+D+ +R++V+ +DCY L +VH +W +PG+ KDY+
Sbjct: 252 KNFYSIHKKMLRDHKQLSEIYDLLAIRVLVDTVKDCYGTLGIVHSMWRPIPGRFKDYVAV 311
Query: 512 PKFNGY 517
PK N Y
Sbjct: 312 PKSNMY 317
>gi|295091158|emb|CBK77265.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium cf.
saccharolyticum K10]
Length = 761
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 195/310 (62%), Gaps = 9/310 (2%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E ++ +A+ Q H V KA+ A AH+ Q R SG+PY++H + A++LA +
Sbjct: 24 EELYQDLIASIQRYHPSDDISMVEKAYRLAFEAHKDQKRKSGEPYIIHPLCVAIILADLE 83
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 330
+ + AG+LHD ++D ++ D + R FGA VA LV+GV+KL+ +S + +
Sbjct: 84 LDKETIVAGILHDVVEDTVMTTDGLAREFGAEVALLVDGVTKLTNISW-----DKDKVEM 138
Query: 331 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 389
+A+ L MFLAMA D R +L+KLADRLHNM TL + K++ A+ET++I+ P+A+RLG
Sbjct: 139 QAENLRKMFLAMAKDIRVILVKLADRLHNMRTLQYMKPEKQREKARETMDIYAPIADRLG 198
Query: 390 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVL 447
IS K +L++L K+L P+ + ELS K+ D EA V +++++ + D I V
Sbjct: 199 ISRIKTELDDLALKYLEPEVYYELSEKISLRKDAREAFVKGIVDEVKSHMDDAGIECKV- 257
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K +SI+ KM+K+ T+D+I+D++ +R+IV+ +DCY AL V+H+L+ +PG+ KD
Sbjct: 258 DGRVKHFFSIYKKMVKQNKTLDQIYDLFAVRIIVDTVKDCYAALGVIHELYKPIPGRFKD 317
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 318 YIAMPKINNY 327
>gi|336424063|ref|ZP_08604110.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336012840|gb|EGN42733.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 809
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH GQ+R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 85 MIEKAYKIAYAAHEGQVRKSGEPYIIHPLCVAIILADLELDKETIEAGLLHDVVEDTIMT 144
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLS----KLARENNTASKT-VEADRLHTMFLAMA-DA 345
I + FG VA LV+GV+KL Q+ K EN TA + ++A+ L MFLAMA D
Sbjct: 145 EAEIEKEFGPDVALLVDGVTKLQQIDFPSDKGNGENKTADQQEMQAENLRKMFLAMAKDI 204
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R ++IKLADRLHNM TL P K+Q+ A+ET+EI+ P+A RLGIS KV+L++L K+L
Sbjct: 205 RVIMIKLADRLHNMRTLKYQPPAKQQKIARETMEIYAPIAQRLGISKIKVELDDLSLKYL 264
Query: 406 NPDQHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
P+ + +L K+ E + ++++ + +K+ I + GR K +SI+ KM
Sbjct: 265 EPEVYYDLVDKIAVRRSEREEYIQQIVDEVSEHMKNAGIKSQI-DGRVKHFFSIYKKMKN 323
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 324 QSKTLDQIYDLFAVRIIVDSVKDCYAALGVIHEMYKPIPGRFKDYIAMPKANMY 377
>gi|434402920|ref|YP_007145805.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
gi|428257175|gb|AFZ23125.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
Length = 756
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 190/323 (58%), Gaps = 18/323 (5%)
Query: 206 VEGNLETYAKEFLANAQLKHKIFRED-------FVIKAFYEAERAHRGQMRASGDPYLLH 258
V+ L + K+ L + K ED + +AF A + H+GQ R SG+PY+ H
Sbjct: 10 VDVTLPEWLKKCLKESSKKSSEIDEDRRHSDSALICRAFQFAYQLHQGQYRKSGEPYIGH 69
Query: 259 CVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSK 318
V A LL +G + ++AAG LHD ++D ++ D I FG V LVEGV+KLS++
Sbjct: 70 PVAVAGLLRDLGGSPAMIAAGFLHDVVEDTEVTIDQIEERFGPEVRQLVEGVTKLSKI-- 127
Query: 319 LARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKE 376
N SKT +A+ MFLAMA D R +++KLADRLHNM TL +P KR+R A+E
Sbjct: 128 -----NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQFMPDEKRRRIAQE 182
Query: 377 TLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLE 434
T +IF PLANRLGI +K +LE+L FK+L P+ ++ + + E E +T + L
Sbjct: 183 TRDIFAPLANRLGIWQFKWELEDLAFKYLEPEAFRQIQTYVSEKRAAREEKLTKVTDILR 242
Query: 435 QALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVV 494
Q L+ + + + GR K LY I+ KM +++ EI+D+ LR+IV+ E+CY+AL VV
Sbjct: 243 QRLQQAGVRCVDVSGRTKHLYGIYQKMHRQQKEFHEIYDLAALRIIVQTNEECYRALAVV 302
Query: 495 HQLWAEVPGKMKDYITRPKFNGY 517
H + +PG+ KDYI PK N Y
Sbjct: 303 HDAFRPIPGRFKDYIGLPKPNRY 325
>gi|255280796|ref|ZP_05345351.1| GTP diphosphokinase [Bryantella formatexigens DSM 14469]
gi|255268733|gb|EET61938.1| RelA/SpoT family protein [Marvinbryantia formatexigens DSM 14469]
Length = 774
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 194/307 (63%), Gaps = 11/307 (3%)
Query: 215 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
+E +A+ + H + KA+ A AH+GQ R SG+PY++H + A++LA + +
Sbjct: 39 QELIASIKRYHPSADTSMIEKAYKIASEAHKGQKRKSGEPYIIHPLCVAIILADLEMDKE 98
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEAD 333
+ AGLLHD ++D ++ + I + FG V LV+GV+KL QLS +A K V+A+
Sbjct: 99 TITAGLLHDVVEDTVMTSEEIRQEFGEDVEQLVDGVTKLGQLS------YSADKIEVQAE 152
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLGIS
Sbjct: 153 NLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMSPEKQKEKARETMDIYAPIAQRLGISK 212
Query: 393 WKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
KV+L++L K+L PD + +L K L + E V ++++++ ++D I V GR
Sbjct: 213 IKVELDDLSLKYLQPDVYYDLVEKVALRKTEREKFVQGIVDEVKKHIEDAGIRAQV-DGR 271
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +SI+ KM+ + T+D+I+D++ +R+IV+ +DCY AL V+H+++ +PG+ KDYI
Sbjct: 272 VKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTVKDCYAALGVIHEMYTPIPGRFKDYIA 331
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 332 MPKPNMY 338
>gi|150016418|ref|YP_001308672.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
gi|149902883|gb|ABR33716.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
Length = 738
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 183/290 (63%), Gaps = 7/290 (2%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ AE+AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 EMVKKAYDFAEKAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTEF 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SYD F A +A+LVEGV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SYDETVSLFNAEIANLVEGVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPAKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL + E E + + L+Q L + I + GR K YSI+ KM+ K +
Sbjct: 196 YYELVDSIAEKRVERETYINDIVNDLKQKLGNSGIESDI-DGRPKHFYSIYKKMVSKNKS 254
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 255 IEQIFDLTAIRVLVHSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMY 304
>gi|121535597|ref|ZP_01667404.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
gi|121305837|gb|EAX46772.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
Length = 735
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AHRGQ R SG+ Y+ H + A +LA + ++ ++AGLLHD ++D +
Sbjct: 26 ELVQKAYAFAGEAHRGQYRVSGEEYITHPLGVAKILADLQIDALTISAGLLHDVVEDTPV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I + FG +A LV+GV+KLS++ ++E + + MFLAMA D R VL
Sbjct: 86 TLEEIEKQFGKEIAMLVDGVTKLSRMEYKSKEEQ------QLESYRKMFLAMAKDIRVVL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++ A+ETLEIF PLANRLGI + K +LE+L F+ L P++
Sbjct: 140 IKLADRLHNMRTLKYMPPAKQKEIARETLEIFAPLANRLGIFSIKWELEDLAFRFLEPEK 199
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL K+ + EA++ AI+ L + L I + GR K YSI+ KM K
Sbjct: 200 YYELVEKVKQKRQEREALINEAIKILSERLTAMGIKAEI-QGRPKHFYSIYKKMQKDNKD 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ +R+IV+ +DCY AL +VH LW +PG+ KDYI PK N Y
Sbjct: 259 LSEIYDLSAVRVIVDTIKDCYAALGIVHTLWKPIPGRFKDYIAMPKSNMY 308
>gi|386394260|ref|ZP_10079041.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
gi|385735138|gb|EIG55336.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
Length = 737
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 182/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH GQ+R SG+PYL H +E A +LA + ++ VAAGLLHDT++D +
Sbjct: 22 IITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLDAASVAAGLLHDTVEDTKAT 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VAD+V+GV+K+S + ++E +A+ + M LAMA D R VL+
Sbjct: 82 VDEIEELFGDEVADIVDGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ KR A+ET++I+ PLANRLG+ K +LE+L FK+L PD +
Sbjct: 136 KLADRLHNMRTLEFQKPVKRALIAQETMDIYAPLANRLGLHRIKTELEDLSFKYLKPDVY 195
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+++ + + DE+ + I ++ Q + + NI ++ GR K L+S+ KM + LT+
Sbjct: 196 SQIKAGVDRHHTLDESYIERVIGQIRQMVGENNIRARII-GRRKHLWSVFNKMRVQGLTI 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++HD+ R++VE +CY L +VH +W VPG+ KDYI+ PK N Y
Sbjct: 255 DQVHDLVAFRVLVETIRECYAVLGLVHSIWKPVPGRFKDYISMPKANMY 303
>gi|406998160|gb|EKE16104.1| hypothetical protein ACD_11C00030G0012 [uncultured bacterium]
Length = 492
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 183/292 (62%), Gaps = 8/292 (2%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R+ +++A+ AE AHRGQ R+SG+ Y+ H + TA LA +G +AAGLLHD +D
Sbjct: 21 RKKMIVEAYEFAEEAHRGQKRSSGEDYIQHSLATAKTLAEMGMGRNTIAAGLLHDVYEDT 80
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+S I + FG VA +V+GVSKL ++ KL + + + L MFLAMA D R
Sbjct: 81 SVSLKDIEKKFGKEVAFMVDGVSKLGKI-KL----RGSHEEYYLENLRKMFLAMAADIRV 135
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
V+IKLADRLHNM TL P K+ R AKET+EIF P+ANRLGI + QL++L F++L P
Sbjct: 136 VIIKLADRLHNMQTLKHRPPEKQLRIAKETMEIFAPIANRLGIGEIRSQLQDLSFEYLEP 195
Query: 408 DQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + + + + E V AI +LE+ LK + I + + GR KSLYS K+ K
Sbjct: 196 ENYKFTKETITKNYQERERYVNQAIHELEKELKKEGIDVVDIHGRAKSLYSSFLKLKKYD 255
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ ++++HD+ +R+IV DCY+AL +VH+ + + G++KDYI+ PK NGY
Sbjct: 256 MDINKVHDLTAVRIIVSEIADCYEALGIVHKKYRPMIGRIKDYISLPKPNGY 307
>gi|390934796|ref|YP_006392301.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570297|gb|AFK86702.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 718
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ ++KA+ A +AH+GQ R SG+PY++H VE AM+LA + + + +A+GLLHD ++D +
Sbjct: 20 NLILKAYDYAVKAHKGQYRNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVIEDTSI 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I FG +ADLV+GV+KL + ++ +A+ + M +AMA D R ++
Sbjct: 80 TYEDIKNEFGQEIADLVDGVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIM 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD+
Sbjct: 134 IKLADRLHNMRTLKFLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ + E + IEKL++ L + I V GR K YSI+ KM ++ T
Sbjct: 194 YYSLVEKVAKKRKEREESIKELIEKLKEKLNEIGIKADV-DGRPKHFYSIYKKMKQQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L VVH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLMAVRVIVNTVKDCYGTLGVVHTLWKPMPGRFKDYIAMPKPNMY 302
>gi|331002004|ref|ZP_08325524.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411800|gb|EGG91205.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 762
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 189/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A+ AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D +S
Sbjct: 48 MITKAYELAKTAHNDQRRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAIS 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
++ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 FEELSDMFGVDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+LS KL + + V I+K+ + L I + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKINEHLSVTGIKYQI-NGRVKHLFSIYKKMVNQNKTL 281
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IVE+ CY AL VH+++ +PG+ KDYI PK N Y
Sbjct: 282 DQIYDVFAIRIIVEDVAACYLALGTVHEIYKPIPGRFKDYIAMPKQNMY 330
>gi|16330670|ref|NP_441398.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|383322412|ref|YP_005383265.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325581|ref|YP_005386434.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491465|ref|YP_005409141.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436732|ref|YP_005651456.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451814828|ref|YP_007451280.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|6647853|sp|P74007.1|SPOT_SYNY3 RecName: Full=Probable guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|1653162|dbj|BAA18078.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|339273764|dbj|BAK50251.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|359271731|dbj|BAL29250.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274901|dbj|BAL32419.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278071|dbj|BAL35588.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958589|dbj|BAM51829.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451780797|gb|AGF51766.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
Length = 760
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 180/289 (62%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A H Q R SG+PY+ H V A LL +G + ++AAG LHD ++D +S
Sbjct: 53 LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDIS 112
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FG A LVEGV+KLS+ N +++ +A+ MFLAMA D R +++
Sbjct: 113 IEQIEALFGEETASLVEGVTKLSKF------NFSSTTEHQAENFRRMFLAMAKDIRVIVV 166
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLDAL K++R A+ET +IF PLANRLGI +K +LE+L FK+L PD +
Sbjct: 167 KLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPDSY 226
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++ S +VE E+ + + + L L+D+ I L GR K LY I+ KM +
Sbjct: 227 RKIQSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHFELQGRPKHLYGIYYKMTSQDKAF 286
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+DI LR+IVE++ +CY+AL VVH ++ +PG+ KDYI PK N Y
Sbjct: 287 EEIYDIAALRIIVESKGECYRALSVVHDVFKPIPGRFKDYIGLPKPNRY 335
>gi|381191174|ref|ZP_09898685.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
gi|380450963|gb|EIA38576.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
Length = 727
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 193/306 (63%), Gaps = 24/306 (7%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ AE AHRGQ+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++
Sbjct: 27 VREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAP 86
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + R FG V +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 87 EELERRFGPTVRRIVEGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVK 143
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+
Sbjct: 144 LADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFA 203
Query: 412 ELSSKL--VECFDEAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKK 464
LS+++ + E ++ AI L++ L +D+ + + GR K LYSI KM ++
Sbjct: 204 SLSARIQATQEARERLIQKAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMERE 263
Query: 465 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 511
T+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 264 GKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 323
Query: 512 PKFNGY 517
PK NGY
Sbjct: 324 PKPNGY 329
>gi|348027280|ref|YP_004767085.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
gi|341823334|emb|CCC74258.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
Length = 734
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 186/290 (64%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ AE AH+ Q R SG+PY+LH + A +LA + ++T + A LLHD ++D
Sbjct: 27 DDVTKAYQLAEEAHKDQRRVSGEPYILHPLAVAQILADMKIDTTTITASLLHDVVEDTSY 86
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + + FG VA LV+GV+KLS+L+ +E+ + + + MFLAMA D R V+
Sbjct: 87 TLDDLKKMFGKEVAFLVDGVTKLSRLNYRTKEDQ------QLNSMRKMFLAMAKDVRVVV 140
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++R A+ETLEIF PLA+RLGI K +LE+L F++L PD+
Sbjct: 141 IKLADRLHNMRTLRYMRSDKQKRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDK 200
Query: 410 HTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L ++ + E +V AI+ L++AL + +I + GR K YSI+ KM K
Sbjct: 201 YYDLVDQMKQKRHVREEIVNEAIDVLKKALDEAHIH-CEINGRPKHFYSIYKKMKKDNRD 259
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++D++ +R+IV++ +DCY L +VH LW +P + KDYI PK N Y
Sbjct: 260 LSQVYDLFAIRVIVDDVKDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNY 309
>gi|406706298|ref|YP_006756651.1| RelA/SpoT family (p)ppGpp synthetase [alpha proteobacterium HIMB5]
gi|406652074|gb|AFS47474.1| (p)ppGpp synthetase, RelA/SpoT family [alpha proteobacterium HIMB5]
Length = 582
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 198/318 (62%), Gaps = 15/318 (4%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
++E + ++ +K + + KA+ A +AH+ Q RASGDPY +H + A +L + +S
Sbjct: 4 SEELINKIKIYNKFLNPEKLDKAYNFAVKAHKDQKRASGDPYSVHPIAVANILTELKLDS 63
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+A GLLHDT++D + +Y+ I FG VADLVEGV+K+S NTA+ +A+
Sbjct: 64 ATIATGLLHDTIEDTYATYETIKNEFGEEVADLVEGVTKISVFE------NTAASNSKAE 117
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL-CKRQRFAKETLEIFVPLANRLGIS 391
+ LA + D R +L+K+ADRLHNM T+DA+ KR+R A+ET+EI+ PLA+R+G+
Sbjct: 118 NFRKLILATSKDIRVLLVKIADRLHNMRTIDAITKEEKRKRIAQETMEIYAPLADRMGMH 177
Query: 392 TWKVQLENLCFKHLNPDQHTELSSKLVECFD---EAMVTSAIEKLEQALKDKNISFLVLC 448
+ +LE+L FK LN T + +KL E + + T +IE L + L D I + +
Sbjct: 178 RIRDELEDLSFKILNNQARTLIKNKLDEIKEDKKDTFETLSIE-LTELLNDHKI-YAEIY 235
Query: 449 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 508
GR K+ +SI K+ KK++++++I DI G R+I+ +DCY+ L + H+ W VPGK KDY
Sbjct: 236 GREKTPFSIWRKVQKKRVSLEQITDIIGFRIILNTVDDCYKTLGIFHKKWNCVPGKFKDY 295
Query: 509 ITRPKFNGY--IFSQVVL 524
I+ PK NGY I + VV+
Sbjct: 296 ISSPKINGYKSIHTSVVI 313
>gi|383753776|ref|YP_005432679.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365828|dbj|BAL82656.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 739
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 181/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH+GQ+R SG+ Y++H + A +L + + ++A LLHD ++D +
Sbjct: 29 LIRKAYDLAVEAHKGQVRVSGEEYIIHPLHVAEILTELHIDDVTISAALLHDVVEDTLYT 88
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FG VA +V+GV+KL ++ ++E V+ + MFLAMA D R +++
Sbjct: 89 KEQIEEMFGEEVAMIVDGVTKLGRIKYKSKEE------VQLENYRKMFLAMAKDIRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++R AKET+EI+ PLANRLGIS K +LE+LC ++L P+++
Sbjct: 143 KLADRLHNMRTLKYMREDKQKRIAKETIEIYAPLANRLGISNIKWELEDLCLRYLEPEKY 202
Query: 411 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L + + E A + +AIE++E + + I + GR K YSI+ KML+ K +
Sbjct: 203 YDLVENVKQKRKERQAFIDTAIEQIETKIGEAGIKAEI-KGRAKHFYSIYKKMLRDKKDI 261
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++VE+ DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 262 SEIYDLSAIRVLVESVRDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|312135681|ref|YP_004003019.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor owensensis
OL]
gi|311775732|gb|ADQ05219.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor owensensis
OL]
Length = 726
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 187/293 (63%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KAF A++ H GQ R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKHHEGQARSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 346
S + I R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 86 SLEDIEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 136
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+LIKLADRLHNM TL LP K+++ A+ET+EI+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIEIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N Y
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMY 309
>gi|46199657|ref|YP_005324.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|384431896|ref|YP_005641256.1| (p)ppGpp synthetase I SpoT/RelA [Thermus thermophilus SG0.5JP17-16]
gi|46197283|gb|AAS81697.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|333967364|gb|AEG34129.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus thermophilus
SG0.5JP17-16]
Length = 727
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 193/306 (63%), Gaps = 24/306 (7%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ AE AHRGQ+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++
Sbjct: 27 VREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAP 86
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + R FG V +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 87 EELERRFGPTVRRIVEGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVK 143
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+
Sbjct: 144 LADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFA 203
Query: 412 ELSSKL--VECFDEAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKK 464
LS+++ + E ++ AI L++ L +D+ + + GR K LYSI KM ++
Sbjct: 204 SLSARIQATQEARERLIQKAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMERE 263
Query: 465 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 511
T+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 264 GKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 323
Query: 512 PKFNGY 517
PK NGY
Sbjct: 324 PKPNGY 329
>gi|312898881|ref|ZP_07758269.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
gi|310620043|gb|EFQ03615.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
Length = 732
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 182/286 (63%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A+ AH+ Q R +GDPY+LH + A +LA + ++T + A LLHD ++D +
Sbjct: 31 KAYELADEAHKEQKRVNGDPYILHPLAVAEILADMEIDTTTITASLLHDVVEDTEYMLED 90
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I R FG VA LV+GV+KL++L +E+ + + + MFLAMA D R V+IKLA
Sbjct: 91 IERIFGKEVAFLVDGVTKLNRLDYRTKEDQ------QVNSMRKMFLAMAKDIRVVVIKLA 144
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K++R A+ETLEI+ PLA+RLGI K +LE+L F+++ PD++ +L
Sbjct: 145 DRLHNMRTLKYMRSEKQKRIAQETLEIYAPLAHRLGIFNIKWELEDLSFRYMEPDKYYDL 204
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ E E +V AI+ L++ L + +ISF + GR K YSI+ KM K + +I
Sbjct: 205 VDQMKEKRKVREEIVNEAIDVLKKTLTESSISFEI-NGRPKHFYSIYKKMKKDNRDLSQI 263
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+Y +R+IV+ +DCY L +VH LW +P + KDYI PK N Y
Sbjct: 264 YDLYAIRVIVDTVQDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNY 309
>gi|254527119|ref|ZP_05139171.1| RelA/SpoT family protein [Prochlorococcus marinus str. MIT 9202]
gi|221538543|gb|EEE40996.1| RelA/SpoT family protein [Prochlorococcus marinus str. MIT 9202]
Length = 769
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 182/291 (62%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
++ + KAF A +AH GQ RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QNLIAKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLCEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 409 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYLDLKDQIAVKRSDREKRLKLTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV++ + CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 294 HFHEIYDVAALRIIVDDSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGY 344
>gi|347736231|ref|ZP_08868924.1| GTP pyrophosphokinase rsh [Azospirillum amazonense Y2]
gi|346920343|gb|EGY01483.1| GTP pyrophosphokinase rsh [Azospirillum amazonense Y2]
Length = 733
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 178/292 (60%), Gaps = 7/292 (2%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ + +AH Q RASGDPY H +E A LL + + + LLHDT++D
Sbjct: 27 EDKLNRAYVFSMKAHGSQKRASGDPYFSHPLEVAGLLTQLKLDGASIITALLHDTVEDTL 86
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ D + R FG +A LV+GV+KLS ++ +N + ++ +A+ + LAM+ D R +
Sbjct: 87 TTLDEVQRLFGPEIARLVDGVTKLS---RIELQNLESDQSKQAENFRKLVLAMSEDIRVL 143
Query: 349 LIKLADRLHNMMTLDALPLC-KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
L+KLADRLHNM TL L KR+R A+ETLEI+ PLA R+GI WK QLE L FK LNP
Sbjct: 144 LVKLADRLHNMQTLHYLSKPEKRKRIARETLEIYAPLAERIGIQRWKDQLEELSFKELNP 203
Query: 408 DQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
D + ++ +L + ++ V I +L L + + + GR K+ YSI KM +K
Sbjct: 204 DAYDSITKRLQDLEEQGAGRVDRIITELVDTLHENGLPQATVSGRRKAPYSIWRKMQRKN 263
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+T +++ D+ R+ VE+ E CYQAL V+H + VPG+ KDY++ PK NGY
Sbjct: 264 VTFEQLSDVMAFRITVESIEQCYQALGVIHARYPVVPGRFKDYVSTPKPNGY 315
>gi|425443682|ref|ZP_18823753.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9443]
gi|389730348|emb|CCI05359.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9443]
Length = 765
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 188/314 (59%), Gaps = 15/314 (4%)
Query: 210 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 269
L + +E L N + + D + +AF A + H GQ R SG+PY+ H + A LL +
Sbjct: 27 LPDWLQECLINYENDPQNPDSDLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDL 86
Query: 270 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 329
G + ++AAG LHD ++D ++ + I FG V +LVE V+KLS+ N +SKT
Sbjct: 87 GGDGAMIAAGFLHDVVEDTEVTPEEIEDRFGVEVRNLVEAVTKLSKF-------NFSSKT 139
Query: 330 -VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ MFLAMA D R +++KLADRLHNM TL+ L ++QR A ET EIF PLANR
Sbjct: 140 ERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLTPQQQQRIALETREIFAPLANR 199
Query: 388 LGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNIS 443
LGI +K +LE+LCFK+L PD + + +S K ++ EA + + L + L++ I
Sbjct: 200 LGIGRFKWELEDLCFKYLEPDAYRQVQLLVSEKRID--REARIETVTNTLREKLQEIGIK 257
Query: 444 FLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 503
L L GR K LY I+ KM + ++I+DI +R+IVE +E+CY+ L +VH + +P
Sbjct: 258 VLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPN 317
Query: 504 KMKDYITRPKFNGY 517
+ KDYI PK N Y
Sbjct: 318 RFKDYIGLPKANRY 331
>gi|333897247|ref|YP_004471121.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112512|gb|AEF17449.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 718
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 184/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ ++KA+ A +AH GQ R SG+PY++H VE AM+LA + + + +A+GLLHD ++D +
Sbjct: 20 NLILKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVIEDTSI 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SY+ I FG +ADLV+GV+KL + ++ +A+ + M +AMA D R ++
Sbjct: 80 SYEDIKNEFGQEIADLVDGVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIM 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD+
Sbjct: 134 IKLADRLHNMRTLKFLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDE 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ + E + IEKL++ L + I V GR K YSI+ KM ++ T
Sbjct: 194 YYSLVEKVAKKRKEREESIKELIEKLKEKLNEIGIKADV-DGRPKHFYSIYKKMKQQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L VVH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLMAVRVIVNTVKDCYGTLGVVHTLWKPMPGRFKDYIAMPKPNMY 302
>gi|410724219|ref|ZP_11363418.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
gi|410602505|gb|EKQ56985.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
Length = 738
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 186/294 (63%), Gaps = 15/294 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA++ AE+AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 NMVEKAYHFAEQAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDC 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SYD + F A +A+LVEGV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SYDETVKLFNAEIANLVEGVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ EL + E + + +V EKLE + +I GR K YSI+ KM+
Sbjct: 196 YYELVDSIAEKRVERETYIKDIVKDLYEKLETSGIHSDID-----GRPKHFYSIYKKMVS 250
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 KNKSIEQIFDLTAIRVLVHSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMY 304
>gi|386359779|ref|YP_006058024.1| RelA/SpoT family (p)ppGpp synthetase [Thermus thermophilus JL-18]
gi|383508806|gb|AFH38238.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus thermophilus JL-18]
Length = 724
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 193/306 (63%), Gaps = 24/306 (7%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ AE AHRGQ+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++
Sbjct: 24 VQEAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAP 83
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + R FG V +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 84 EELERRFGPTVRRIVEGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVK 140
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+
Sbjct: 141 LADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFA 200
Query: 412 ELSSKL--VECFDEAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKK 464
LS+++ + E ++ AI L++ L +D+ + + GR K LYSI KM ++
Sbjct: 201 SLSARIQATQEARERLIQKAIHLLQETLTRDELLQSQLQGFEVTGRPKHLYSIWKKMERE 260
Query: 465 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 511
T+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 261 GKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 320
Query: 512 PKFNGY 517
PK NGY
Sbjct: 321 PKPNGY 326
>gi|352095563|ref|ZP_08956577.1| (p)ppGpp synthetase I, SpoT/RelA [Synechococcus sp. WH 8016]
gi|351678705|gb|EHA61850.1| (p)ppGpp synthetase I, SpoT/RelA [Synechococcus sp. WH 8016]
Length = 778
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 171/279 (61%), Gaps = 13/279 (4%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ D + FG V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPDQLESHFGPEV 139
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
+LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RELVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP----DQHTELSSKLV 418
AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P + E+S+K
Sbjct: 194 GALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVSTKRS 253
Query: 419 ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 478
E D VT ++ L L + + GR K LY I KM +++ EI+D+ LR
Sbjct: 254 EREDRLSVT--VQLLCDRLAAVGLDSCEVSGRPKHLYGIWTKMQRQQKEFHEIYDVAALR 311
Query: 479 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 312 ILAPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|55981686|ref|YP_144983.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB8]
gi|55773099|dbj|BAD71540.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp
synthase) [Thermus thermophilus HB8]
Length = 727
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 193/306 (63%), Gaps = 24/306 (7%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ AE AHRGQ+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++
Sbjct: 27 VREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAP 86
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + R FG V +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 87 EELERRFGPTVRRIVEGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVK 143
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+
Sbjct: 144 LADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFA 203
Query: 412 ELSSKL--VECFDEAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKK 464
LS+++ + E ++ AI L++ L +D+ + + GR K LYSI KM ++
Sbjct: 204 SLSARIQATQEARERLIQRAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMERE 263
Query: 465 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 511
T+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 264 GKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 323
Query: 512 PKFNGY 517
PK NGY
Sbjct: 324 PKPNGY 329
>gi|15895542|ref|NP_348891.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
acetobutylicum ATCC 824]
gi|337737491|ref|YP_004636938.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum DSM 1731]
gi|384459001|ref|YP_005671421.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
acetobutylicum EA 2018]
gi|15025278|gb|AAK80231.1|AE007728_10 RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolases
[Clostridium acetobutylicum ATCC 824]
gi|325509690|gb|ADZ21326.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum EA 2018]
gi|336292295|gb|AEI33429.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum DSM 1731]
Length = 740
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 183/291 (62%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D VIKA+ A AH+ QMR SG+PY+ H ++ A +LA +G + + + AG+LHD ++D
Sbjct: 20 KDIVIKAYNFAYEAHKHQMRESGEPYISHPLDVACILAEMGMDMSTIVAGILHDVIEDTS 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
SYD I F VADLV GV+KL +++ +E +AD + M LAMA D R +
Sbjct: 80 YSYDDITEMFSKEVADLVSGVTKLDKITYKTKEEQ------QADNVRKMLLAMAKDIRVI 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL K++ AKETL+I+ PLA+RLG+S K +LE+L F++L P
Sbjct: 134 LIKLADRLHNMRTLKFKREQKQKEKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLKPK 193
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ EL + E E ++ +E+L+ L+ I+ + GR K YSI+ KML K
Sbjct: 194 EYYELVDLIAEKRVEREEYISKIVEELKLNLEASGITPDI-DGRPKHFYSIYRKMLNKSK 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++D+I D+ +R++V N ++CY AL +VH ++ +PG+ KDYI PK N Y
Sbjct: 253 SLDQIFDLTAVRILVNNIKECYAALGIVHTMYKPIPGRFKDYIAMPKPNMY 303
>gi|87123541|ref|ZP_01079392.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9917]
gi|86169261|gb|EAQ70517.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9917]
Length = 777
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 168/277 (60%), Gaps = 9/277 (3%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H+GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D L+ + FGA V
Sbjct: 80 HQGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDLTPAQLESHFGAEV 139
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
+LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RELVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 420
AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L PD E+ ++
Sbjct: 194 GALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPDAFREIQQEVATKRS 253
Query: 421 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 480
E + ++ L L + + GR K LY I KM +++ EI+D+ LR++
Sbjct: 254 EREERLGVTVKLLSDRLAAVGLDSCEVSGRPKHLYGIWSKMQRQQKAFHEIYDVAALRIL 313
Query: 481 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 314 TPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|118444430|ref|YP_877917.1| GTP pyrophosphokinase [Clostridium novyi NT]
gi|118134886|gb|ABK61930.1| GTP pyrophosphokinase [Clostridium novyi NT]
Length = 729
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 185/291 (63%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D +IKA+ A+ AH+ Q R SG+PY++H VE A +LA +G + +AA LLHD ++D
Sbjct: 18 KDIIIKAYNYAKDAHKAQKRISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTD 77
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+Y+ + + F VA+LVEGV+KL ++ +E +++ + M LAM D R +
Sbjct: 78 YTYEDVEKEFNREVANLVEGVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVI 131
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL + + K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+
Sbjct: 132 LIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNPN 191
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L K+ E E + I +L++ L + I + GR K YSI+ KM+ K
Sbjct: 192 EYYDLVRKVAEKRKEREEYIERIIHELKEKLDEAGIKSEI-EGRPKHFYSIYRKMVVKNK 250
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I D+ +R++VE+ +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 TIDQIFDLTAVRILVEDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMY 301
>gi|283795474|ref|ZP_06344627.1| GTP diphosphokinase [Clostridium sp. M62/1]
gi|291077138|gb|EFE14502.1| RelA/SpoT family protein [Clostridium sp. M62/1]
Length = 761
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 187/289 (64%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A AH+ Q R SG+PY++H + A++LA + + + AG+LHD ++D ++
Sbjct: 45 MVEKAYRLAFEAHKDQKRKSGEPYIIHPLCVAIILADLELDKETIVAGILHDVVEDTVMT 104
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FGA VA LV+GV+KL+ +S + ++A+ L MFLAMA D R +L+
Sbjct: 105 TDGLAREFGAEVALLVDGVTKLTNISW-----DKDKVEMQAENLRKMFLAMAKDIRVILV 159
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ET++I+ P+A+RLGIS K +L++L K+L P+ +
Sbjct: 160 KLADRLHNMRTLQYMKPEKQREKARETMDIYAPIADRLGISRIKTELDDLALKYLEPEVY 219
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
ELS K+ D EA V +++++ + D I V GR K +SI+ KM+K+ T+
Sbjct: 220 YELSEKISLRKDAREAFVKGIVDEVKSHMDDAGIECKV-DGRVKHFFSIYKKMVKQNKTL 278
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IV+ +DCY AL V+H+L+ +PG+ KDYI PK N Y
Sbjct: 279 DQIYDLFAVRIIVDTVKDCYAALGVIHELYKPIPGRFKDYIAMPKINNY 327
>gi|150390117|ref|YP_001320166.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus metalliredigens QYMF]
gi|149949979|gb|ABR48507.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus metalliredigens
QYMF]
Length = 727
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ +I+A++ E AH+GQ R SG+ Y +H VE A +L + +S+ +AAGLLHD ++D
Sbjct: 19 ELIIRAYHYGENAHQGQYRKSGEQYFIHPVEVAKILIELKMDSSTIAAGLLHDVIEDTPY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
Y + FG VA+LVEGV+KL++LS ++E +A+ L MF+AMA D R VL
Sbjct: 79 GYGKVREEFGEEVAELVEGVTKLTRLSFESKEER------QAENLRKMFIAMAKDIRVVL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL K++ A ETLEIF P+A+RLGIS K +LE+LC +++P+
Sbjct: 133 IKLADRLHNMRTLKYQSDEKKKEKAMETLEIFAPIAHRLGISRIKWELEDLCLLYIDPEG 192
Query: 410 HTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + E + I L+ + + I + GR K YSI+ KM+ + +
Sbjct: 193 YYDLVDKVAKKRRDRETFINKVISILDGKMDEFGIENEI-SGRPKHFYSIYRKMVYQNKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI D R+IV N +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 252 FDEIFDFIAFRVIVNNVKDCYGILGIVHTLWKPIPGRFKDYIAMPKPNMY 301
>gi|78044718|ref|YP_361036.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996833|gb|ABB15732.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 716
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 178/291 (61%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E+ + KA+ A AH GQ RASG+ Y+ H + A +LA + + +AAGLLHD ++D
Sbjct: 20 EELIKKAYNFAAEAHAGQKRASGEDYITHPLAVAFILAGLQMDDETIAAGLLHDVVEDTA 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ + I R FG VA+LV+GV+KLS++ +E + + L MFLAMA D R +
Sbjct: 80 YTIEDIAREFGEEVANLVDGVTKLSRIEFKNKEEQ------QVENLRKMFLAMAKDIRVI 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL K++ A+ETLEIF PLA+RLGI K +LE+L F++L+PD
Sbjct: 134 LIKLADRLHNMRTLKYHNPEKQKEIARETLEIFAPLAHRLGIYRIKWELEDLAFRYLDPD 193
Query: 409 QHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ K+ + E + I LE+ LK NI + GR K LYSI KM +++
Sbjct: 194 NYYDIVEKIAKTRAKREQYIQQVISILEEKLKSYNIKAKI-EGRPKHLYSIFQKMREQQK 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
E++D+ +R+IVE+ DCY L ++H +W VPG+ KDYI PK N Y
Sbjct: 253 DFSEVYDVMAVRVIVESVRDCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMY 303
>gi|33864375|ref|NP_895935.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Prochlorococcus
marinus str. MIT 9313]
gi|33641155|emb|CAE22285.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9313]
Length = 776
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 170/277 (61%), Gaps = 9/277 (3%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D L+ + + FGA V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDLTPEQLEDYFGAEV 139
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
+LVEGV+KL + N T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RELVEGVTKLGGI------NFTNHTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 420
+L K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++
Sbjct: 194 GSLQADKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVATKRS 253
Query: 421 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 480
E + + +E L + L + + GR K LY I KM +++ EI D+ LR+I
Sbjct: 254 ERENRLANTVELLTERLASAGLDTCEVSGRPKHLYGIWSKMQRQQKAFHEIFDVAALRII 313
Query: 481 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 314 APSVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
Length = 726
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 182/291 (62%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ + +AH G +R SG+PY+ H + A LLA + + VAAGLLHDT++D
Sbjct: 21 DLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVAYLLAEMQLDEATVAAGLLHDTVEDTQA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAV 348
S D I FG+ VAD+V+GV+K+SQ+ + SK V+ A+ + + LAMA D R +
Sbjct: 81 SVDEIEEFFGSDVADIVDGVTKISQM-------DFESKAVQQAENIRKLILAMAEDIRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ + K++ A+ET +I+ PLANRLG+ K +LE+LC ++L PD
Sbjct: 134 MVKLADRLHNMRTLEFMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELEDLCLRYLKPD 193
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+LS + E E + I+ + LK I V GR K L+SIH KM ++ L
Sbjct: 194 VFDQLSQAVSEHRASGEPYIDKVIDLINDMLKKNKIKGRVY-GRTKHLHSIHVKMEQQGL 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T DEI+D+ R+I+E+ +DCY L ++H +W VPG+ KDYI+ PK N Y
Sbjct: 253 TFDEIYDLIAFRIILESVKDCYAVLGLIHSIWRPVPGRFKDYISIPKANMY 303
>gi|113476259|ref|YP_722320.1| (p)ppGpp synthetase I SpoT/RelA [Trichodesmium erythraeum IMS101]
gi|110167307|gb|ABG51847.1| (p)ppGpp synthetase I, SpoT/RelA [Trichodesmium erythraeum IMS101]
Length = 750
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/290 (44%), Positives = 175/290 (60%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H GQ R SG+PY+ H V A LL +G +ST++AAGLLHD ++D +
Sbjct: 42 LICRAFEFAYKLHEGQYRKSGEPYICHPVAVAGLLKYLGGDSTMIAAGLLHDIVEDTDVK 101
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FG+ V LVEGV+KLS+ N ++KT ++A+ MFLAMA D R ++
Sbjct: 102 IEEIEEKFGSEVTLLVEGVTKLSKF-------NFSNKTELQAENFRRMFLAMAKDIRVIV 154
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL LP K+ A ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 155 VKLADRLHNMRTLQHLPSHKQLSKALETREIFAPLANRLGIGRIKWELEDLSFKYLEPNA 214
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ + + EA + E L Q L I + GR K LY I+ KM K+
Sbjct: 215 YREIQELVADKRVDREARLLKMTENLRQKLDRLGIECYDISGRPKHLYGIYRKMYLKQKE 274
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
E++DI GLR+IVE EDCY+ L +VH + +PG+ KDYI PK N Y
Sbjct: 275 FHEVYDISGLRIIVEKREDCYRTLAIVHDSYRPIPGRFKDYIGLPKPNRY 324
>gi|434392415|ref|YP_007127362.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
gi|428264256|gb|AFZ30202.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
Length = 761
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 190/314 (60%), Gaps = 11/314 (3%)
Query: 210 LETYAKEFLANAQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 267
L + ++ L Q H+ +D + +AF A H+GQ R SG+PY+ H V A LL
Sbjct: 21 LPEWLQKCLVAPQESHQPSEQDNSLICRAFSFAYDLHQGQYRKSGEPYICHPVAVAGLLR 80
Query: 268 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 327
+G +S ++AAG LHD ++D +S + I + FG V LVEGV+KLS+ S+ +S
Sbjct: 81 DLGGSSAMIAAGFLHDVVEDTDVSIEDIEQRFGNEVRQLVEGVTKLSEFSQ-----KFSS 135
Query: 328 KT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 385
KT +A+ MFLAMA D R +++KLADRLHNM TL+ L K++R A ET EIF PLA
Sbjct: 136 KTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLAPEKQRRIALETREIFAPLA 195
Query: 386 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNIS 443
NRLGI +K +LE+L FK+L P+ + ++ + E EA +T I+ L ++ I
Sbjct: 196 NRLGIGRFKWELEDLAFKYLEPEAYRQIQDLVAEKRVNREARLTRVIDVLTARMEQAEIK 255
Query: 444 FLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 503
+ + GR K LY I+ KM +++ EI+DI +R+IV +E+CY+AL VH + +PG
Sbjct: 256 CIDISGRPKHLYGIYQKMQRQQKEFHEIYDIAAIRIIVNTKEECYRALAEVHDAFKPIPG 315
Query: 504 KMKDYITRPKFNGY 517
+ KDYI PK N Y
Sbjct: 316 RFKDYIGLPKPNRY 329
>gi|197121709|ref|YP_002133660.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. K]
gi|220916506|ref|YP_002491810.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
gi|196171558|gb|ACG72531.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. K]
gi|219954360|gb|ACL64744.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
Length = 746
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +LA + + + V GLLHDT++D
Sbjct: 42 DLIKKAYVYSAKVHQGQIRKSGEPYLVHPLEVAGILAELKLDESSVVTGLLHDTIEDTLA 101
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DAR 346
+ I FG +ADLV+GV+KLSQ TA+ T E A+ M +AMA D R
Sbjct: 102 TKKEISELFGPEIADLVDGVTKLSQF--------TAANTQEEKQAENFRKMVVAMAKDIR 153
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+L+KLADR HNM TLDA+ ++R A+ETL+I+ PLANRLGI K +LE L FK+L
Sbjct: 154 VLLVKLADRTHNMRTLDAMKPESQERIARETLDIYAPLANRLGIQWIKTELEELSFKYLR 213
Query: 407 PDQHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P ++EL+ K+ V + E V +E + + L + + V GR K +YSI+ KM +
Sbjct: 214 PGDYSELNEKVSVRAREKERFVAEVVEIIRRRLAEAGMQADV-SGRVKHVYSIYRKMRQL 272
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ ++I D+ G R+IV+ +CY++L VH LW VPG+ KDYI PK N Y
Sbjct: 273 DVDFEQIQDVVGFRVIVDTVAECYESLGFVHSLWKPVPGRFKDYIAIPKPNLY 325
>gi|90023337|ref|YP_529164.1| GTP diphosphokinase [Saccharophagus degradans 2-40]
gi|89952937|gb|ABD82952.1| RelA/SpoT family protein [Saccharophagus degradans 2-40]
Length = 702
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 182/288 (63%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+Y AE+AH GQ R SG+PY+ H + A +LA++ + + A +LHD ++D +
Sbjct: 23 VKRAYYYAEQAHTGQYRRSGEPYITHPLAVANILASVHMDHQSLMAAMLHDVIEDTGIGK 82
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I FG+ VAD+V+GVSKL+++ E T ++ +A M LAMA D R +++K
Sbjct: 83 QAIADQFGSTVADIVDGVSKLAKI-----EYETQAEK-QAKNFQKMALAMAQDLRVIVVK 136
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
L+DRLHNM TL ALP K++R AKETLEI+ P+A+RLG++ W+++ E+ F ++P + +
Sbjct: 137 LSDRLHNMRTLGALPPEKKRRIAKETLEIYAPIAHRLGMNDWRIEFEDRGFAAMHPLRAS 196
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L + L E +A+V +E L+ +NI LV+ GR K LYSI+ KM K +
Sbjct: 197 RLQASLSEVRGNRKALVEKIQSGIETRLQRENIDGLVI-GREKHLYSIYNKMRSKHKSFK 255
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+Y R+IVE+ + CY+AL +H L+ PG+ KDYI PK NGY
Sbjct: 256 EIMDVYAFRIIVEDIDTCYRALGAIHNLYKPKPGEFKDYIAIPKENGY 303
>gi|226227361|ref|YP_002761467.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
gi|226090552|dbj|BAH38997.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
Length = 717
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 187/291 (64%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +++A+ ++ AH GQ+R SG+PY+ HC+E A +LA + ++ V +GLLHD ++D +
Sbjct: 19 DLLVRAYKYSDAAHAGQVRHSGEPYVSHCIEVARILADLQLDTATVTSGLLHDIVEDTDI 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R FG+ +A +V+G++K++ L +RE + + + L++A DAR +L
Sbjct: 79 TVEDIEREFGSEIAQIVDGLTKIANLPMSSREER------QVENYRKLLLSIAKDARVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TLD L KR+R A+ET +++ PLA+R G++ + +LE+L FKHL PD
Sbjct: 133 IKLADRLHNMRTLDWLAPEKRRRIAQETRDLYAPLAHRFGMAKVRWELEDLAFKHLEPDA 192
Query: 410 HTELSSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ L ++LV EA++ E LE+ L D I+ + + GR K L+SI+ KM ++
Sbjct: 193 YKTL-ARLVAAKRGEREALIAQMREPLEKRLTDAGIADVEVTGRPKHLWSIYKKMQQRDR 251
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV N +CY AL V+H W V ++KDYI +PK NGY
Sbjct: 252 PYEDIYDLLAIRVIVPNVLECYHALGVIHDGWTPVQERIKDYIAQPKSNGY 302
>gi|168052100|ref|XP_001778489.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670087|gb|EDQ56662.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 389
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 138/192 (71%)
Query: 325 TASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPL 384
T T EADRL TM LAM D R VLIK+ADRLHN+ TL+ALP K+ AKETLEIF PL
Sbjct: 1 TVCDTTEADRLRTMILAMVDVRVVLIKIADRLHNLRTLEALPSHKQIGIAKETLEIFAPL 60
Query: 385 ANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISF 444
ANRLGI +WK ++E+LCFK L P H LS +L E E +V S+I L++AL+ + F
Sbjct: 61 ANRLGIWSWKAEMEDLCFKCLKPVDHENLSIRLSERCREGLVMSSIRYLDEALRVGGVQF 120
Query: 445 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 504
+ LCGR K+LYS++ KM+KKK + DEI D+ GLRLIV +EE CYQAL VVHQLW +PGK
Sbjct: 121 IDLCGRPKNLYSVYKKMMKKKRSPDEILDVRGLRLIVTDEESCYQALEVVHQLWRCIPGK 180
Query: 505 MKDYITRPKFNG 516
KDYI K NG
Sbjct: 181 TKDYIVDSKPNG 192
>gi|403384230|ref|ZP_10926287.1| GTP pyrophosphokinase [Kurthia sp. JC30]
Length = 730
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
DFV +A+ A AH+ Q R+SG+PY++H V+ A +LA + + V+AG LHD ++D +
Sbjct: 26 DFVRRAYELAREAHKEQFRSSGEPYIVHPVQVAGILADLQMDPETVSAGFLHDVVEDTEV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA LV+GV+KL ++ + K +A+ MF+AMA D R +L
Sbjct: 86 TRDDLVEQFGEEVAMLVDGVTKLGKIK------YKSKKEQQAENHRKMFVAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP+ K++R +KETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPVEKQRRISKETLEIFAPLAHRLGISAIKWELEDTALRYLNPQQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA + + ++++ L D +I L GR K +YSI+ KM +
Sbjct: 200 YYRIVNLMKRKRTEREAYLKNVMDEIHGQLGDVDIQ-AELSGRPKHIYSIYKKMQSQHKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V++ +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAIRVLVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLY 308
>gi|172039304|ref|YP_001805805.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Cyanothece sp.
ATCC 51142]
gi|354552428|ref|ZP_08971736.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
gi|171700758|gb|ACB53739.1| probable guanosine-3',5'-bis(diphosphate) 3'-diphosphatase,
(ppGpp)ase [Cyanothece sp. ATCC 51142]
gi|353555750|gb|EHC25138.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
Length = 744
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 180/291 (61%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H V A +L +G + ++AAG LHD ++D +
Sbjct: 37 DLICRAFNFAYKLHEGQTRKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVVEDTDV 96
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG VA LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 97 TVEEIEEMFGQEVALLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMARDIRVI 149
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L K++R A+ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 150 VVKLADRLHNMRTLEPLRPEKQKRIARETKEIFAPLANRLGIWRVKWELEDLSFKYLEPE 209
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ E+ + + E E + + L++ L D I L L GR K LY I+ KM ++
Sbjct: 210 DYREIQNFVSEKRIDRETRIETVKNILQKRLDDMGIQVLELQGRPKHLYGIYFKMQRQNK 269
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY+AL VVH ++ +PG+ KDYI PK N Y
Sbjct: 270 GFHEIYDLAALRIIVKTNEECYRALAVVHDVFKPMPGRFKDYIGLPKPNRY 320
>gi|159029396|emb|CAO90772.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 789
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KAF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 72 DLICKAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 131
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 132 TPEEIEDRFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 184
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 185 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 244
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 245 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 302
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N Y
Sbjct: 303 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRY 355
>gi|376261555|ref|YP_005148275.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium sp. BNL1100]
gi|373945549|gb|AEY66470.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. BNL1100]
Length = 726
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 181/286 (63%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ ++ AH GQ R SG+PY++H VE A++LA + + T + A LLHDT++D +YD
Sbjct: 26 KAYSVSKAAHMGQQRISGEPYIIHPVEVAIILAEMELDCTALVAALLHDTIEDTTCTYDQ 85
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA+LV+GV+KL ++ +E + + L MFLAMA D R ++IKLA
Sbjct: 86 LKAQFGQEVAELVDGVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLA 139
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L
Sbjct: 140 DRLHNMRTLKYMTQDKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDL 199
Query: 414 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K+ EA +T I+ L + + I + GR K YSI+ KM+K+ T+++I
Sbjct: 200 VEKINTKRKQREAYITIIIDTLREKTNELGIENAQIDGRPKHFYSIYRKMVKQNKTLEQI 259
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ R+IV + +DCY L +VH+L+ +PG+ KDYI PK N Y
Sbjct: 260 YDLFAFRIIVNSVKDCYAVLGLVHELYKPMPGRFKDYIAMPKPNMY 305
>gi|257055543|ref|YP_003133375.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora viridis
DSM 43017]
gi|256585415|gb|ACU96548.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora viridis
DSM 43017]
Length = 812
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 182/286 (63%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HRGQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 112 RAYDTAEELHRGQHRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 171
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 172 LTEDFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 223
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG+ST K +LE+L F L P ++ E+
Sbjct: 224 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMSTVKWELEDLAFAILQPKKYDEI 283
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I +L + L++ I+ V GR K YSIH KM+ + +D+I
Sbjct: 284 VRLVADRAPSRDTYLRWVIGELTRQLEESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 342
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE+ DCY A+ VVH LW +PG+ KDYI +P++ Y
Sbjct: 343 HDLVGVRILVEDVRDCYAAMGVVHALWQPMPGRFKDYIAQPRYGVY 388
>gi|443659642|ref|ZP_21132391.1| relA/SpoT family protein [Microcystis aeruginosa DIANCHI905]
gi|443332660|gb|ELS47256.1| relA/SpoT family protein [Microcystis aeruginosa DIANCHI905]
Length = 739
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KAF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 22 DLICKAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 82 TPEEIEDRFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 134
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 135 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 194
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 195 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 252
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N Y
Sbjct: 253 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRY 305
>gi|358066224|ref|ZP_09152755.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
WAL-18680]
gi|356695553|gb|EHI57181.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
WAL-18680]
Length = 762
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 190/289 (65%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A AH+ Q R SG+PY++H + A++LA + + + AG+LHD ++D ++
Sbjct: 48 MVEKAYRIAYDAHKEQKRKSGEPYIIHPLCVAIILADLELDKESIVAGILHDVVEDTVMT 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + + FG+ VA LV+GV+KL+QLS + + ++A+ L MFLAMA D R +LI
Sbjct: 108 LDEVAKEFGSEVALLVDGVTKLTQLSW-----SMDKQEIQAENLRKMFLAMAKDIRVILI 162
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ET++I+ P+A+RLGIS K++L++L K+L PD +
Sbjct: 163 KLADRLHNMRTLQYMTPEKQKEKARETMDIYSPIAHRLGISKIKIELDDLSLKYLEPDVY 222
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L+ K+ D EA V +E+++ + + I V GR K +SI+ KM+ + T+
Sbjct: 223 YDLAEKISLRKDAREAFVQGIVEEVKSHMVEAGIDARV-EGRVKHFFSIYKKMVNQDKTL 281
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IVE+ +DCY AL V+H+L+ +PG+ KDYI PK N Y
Sbjct: 282 DQIYDLFAVRIIVESVKDCYAALGVIHELYKPIPGRFKDYIAMPKPNMY 330
>gi|422301714|ref|ZP_16389079.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9806]
gi|389789226|emb|CCI14734.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9806]
Length = 765
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLTSQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ + +S K ++ EA + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRQVQLLVSEKRID--REARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|374313164|ref|YP_005059594.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella mallensis MP5ACTX8]
gi|358755174|gb|AEU38564.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella mallensis MP5ACTX8]
Length = 832
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 182/277 (65%), Gaps = 10/277 (3%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H Q RASG+PY++H +E A +LA + +ST +AAGLLHD ++D ++ + I + FG V
Sbjct: 128 HATQKRASGEPYVIHPLEVAQVLAELKMDSTAIAAGLLHDAVEDTDVTPEEIAKRFGEQV 187
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
A +VEGV+KL ++ RE++ +A+ + M LAM D R V+IKLADRLHNM TL
Sbjct: 188 AHIVEGVTKLDKIKFANREDH------QAENIRKMLLAMVTDVRVVIIKLADRLHNMRTL 241
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VEC 420
+ L K+QR A+ETLEI+ PLA+RLG+ + +LE+L F++ +P Q+T+L++++ +
Sbjct: 242 EHLKPEKQQRIARETLEIYAPLAHRLGMGKLRGELEDLAFRYTDPFQYTQLTTEVDSLRG 301
Query: 421 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 480
EA + + LE L++ NI+ V R K LYSI K+ ++ +D+++D++ +R+I
Sbjct: 302 EGEAFLHRIVSTLEAKLREANINARVES-RIKRLYSIQQKLTAHQIPVDQVYDLFAIRVI 360
Query: 481 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ E+DCY AL ++H W VPG+ KD+I P+ N Y
Sbjct: 361 TQTEQDCYAALGLLHSTWRPVPGRFKDFIAMPRPNMY 397
>gi|284048851|ref|YP_003399190.1| (p)ppGpp synthetase I SpoT/RelA [Acidaminococcus fermentans DSM
20731]
gi|283953072|gb|ADB47875.1| (p)ppGpp synthetase I, SpoT/RelA [Acidaminococcus fermentans DSM
20731]
Length = 740
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 188/307 (61%), Gaps = 10/307 (3%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A+EF A + +FV +A+ A AH Q RASG+PY++H + A +LA + +
Sbjct: 11 AEEFYARISKYLTPRQVEFVREAYNFAAEAHAKQKRASGEPYIIHPLGVASILAQLQMDD 70
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+AA LHD ++D ++ D + FG VA LV+GV+KL ++ ++RE + +
Sbjct: 71 VTLAAAFLHDVVEDTEVTLDQMEDIFGREVAMLVDGVTKLGKIEYISREEQ------QVE 124
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MFLAMA D R VLIKLADRLHNM T+ +P+ K++R + ETLEI+ PLA+RLGI
Sbjct: 125 NYRKMFLAMAKDIRVVLIKLADRLHNMRTMKFMPVNKQKRISSETLEIYAPLAHRLGIYA 184
Query: 393 WKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE+L F+++ P + EL K+ EAMV A+++L + ++ I+ + GR
Sbjct: 185 IKWELEDLAFRYMEPQHYYELVEQVKVKRHEREAMVQEAMDELRKLCEESGINCQI-QGR 243
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
KS YSI+ KM + T++EI+D+ +R++V+ +DCY L +VH W +PG+ KDYI
Sbjct: 244 PKSFYSIYKKMQRDHKTINEIYDLLAVRVLVDTVKDCYGVLGIVHGKWKPIPGRFKDYIA 303
Query: 511 RPKFNGY 517
PK NGY
Sbjct: 304 VPKSNGY 310
>gi|302872388|ref|YP_003841024.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
gi|302575247|gb|ADL43038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
Length = 722
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 186/293 (63%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KAF A++ H GQ R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 22 DLIKKAFEFAQKYHEGQARSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 346
S + I R FG +A+LV+GV+KL +L SKL R +A+ M +AMA D R
Sbjct: 82 SLEDIEREFGKEIAELVDGVTKLGKLEFTSKLER---------QAENYRKMLIAMAKDIR 132
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+LIKLADRLHNM TL LP K+++ A+ET++I+ PL +RLGIS K +LE+L ++L+
Sbjct: 133 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLVHRLGISKIKWELEDLSLRYLD 192
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 193 PEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 252
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N Y
Sbjct: 253 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMY 305
>gi|313895497|ref|ZP_07829053.1| GTP diphosphokinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|320528880|ref|ZP_08029972.1| GTP diphosphokinase [Selenomonas artemidis F0399]
gi|402302377|ref|ZP_10821491.1| GTP diphosphokinase [Selenomonas sp. FOBRC9]
gi|312975623|gb|EFR41082.1| GTP diphosphokinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|320138510|gb|EFW30400.1| GTP diphosphokinase [Selenomonas artemidis F0399]
gi|400380596|gb|EJP33410.1| GTP diphosphokinase [Selenomonas sp. FOBRC9]
Length = 742
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 178/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AHRGQ R SG+ Y++H + A +L + + + A LLHD ++D + +
Sbjct: 32 RAYQFAEKAHRGQARISGEAYIIHPLHVAYILTGLHMDDETICAALLHDVVEDTHATIEE 91
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG +A L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLA
Sbjct: 92 MEELFGKNIAVLIDGVTKLGRIQYMSKED------VQLENYRKMFLAMAKDIRVIMIKLA 145
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + KRQR A ETLE++ PLANRLGIS K++LE+LC ++L PD + L
Sbjct: 146 DRLHNMRTLKYMREDKRQRIAHETLEVYAPLANRLGISNIKIELEDLCLRYLEPDAYYAL 205
Query: 414 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ E A + +I ++ + L+D I + GR K YSI+ KM + ++ EI
Sbjct: 206 VEEVKHKRRERQAFILDSIRQIREKLEDAGIEAEI-KGRAKHFYSIYRKMKRDNKSVSEI 264
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 265 YDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|225548080|ref|ZP_03769365.1| hypothetical protein RUMHYD_00059 [Blautia hydrogenotrophica DSM
10507]
gi|225040756|gb|EEG51002.1| RelA/SpoT family protein [Blautia hydrogenotrophica DSM 10507]
Length = 769
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 195/311 (62%), Gaps = 11/311 (3%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E +E LA + H + KA+ A+ AH GQ R SG+PY++H + A++LA +
Sbjct: 33 EVLYEELLACVRKYHPSADLSMIEKAYRIAKNAHEGQFRKSGEPYIIHPLCVAIILADLE 92
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT- 329
+ + AGLLHD ++D ++ + I + FGA VA LV+GV+KL QLS +A K
Sbjct: 93 LDKETIVAGLLHDAVEDTIMTTEEIQQEFGAEVALLVDGVTKLGQLS------YSADKVE 146
Query: 330 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 388
++A+ L MFLAMA D R +LIKLADRLHNM TL + K+Q A+ET++I+ P+A RL
Sbjct: 147 LQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQQEKARETMDIYAPIAMRL 206
Query: 389 GISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLV 446
GIS KV+L++L K+L PD + +L K L + E V + ++++ ++D I V
Sbjct: 207 GISKVKVELDDLALKYLKPDVYYDLVEKINLKKSEREDYVNQVVGQVKRHMEDAGIKAQV 266
Query: 447 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 506
GR K +SI+ KM+ + T+D+I+D++ +R++V+ +DCY AL V+H+++ +PG+ K
Sbjct: 267 -DGRIKHFFSIYRKMVNQDKTIDQIYDLFAVRILVDTVKDCYAALGVIHEMYKPIPGRFK 325
Query: 507 DYITRPKFNGY 517
DYI PK N Y
Sbjct: 326 DYIAMPKPNMY 336
>gi|148265188|ref|YP_001231894.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter uraniireducens Rf4]
gi|146398688|gb|ABQ27321.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter uraniireducens Rf4]
Length = 716
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 183/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLVRKAYVFCAKVHQGQTRLSGEPYLVHPMEVAGILADLKLDVPTVVTGLLHDTVEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FGA VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 TLEELEGMFGAEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L+P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSIAKETLDIYAPIANRLGISWVKSELEDLSFRYLDPQI 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L+SK+ + E+ V ++ +++ L D I+ V GR K LYSI+ KM + +
Sbjct: 195 YYDLASKVTKKKKERESYVDEVMQIIKEKLADHGITGEV-SGRSKHLYSIYRKMQSRSVD 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI+D+ +R++VE+ +CY+ L ++H W +PG+ KDYI PK N Y
Sbjct: 254 IDEIYDLVAIRVMVEDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMY 303
>gi|313891996|ref|ZP_07825597.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
gi|313119639|gb|EFR42830.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
Length = 783
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 188/319 (58%), Gaps = 19/319 (5%)
Query: 211 ETYAKEFLANA------QLKHKIFRED---FVIKAFYEAERAHRGQMRASGDPYLLHCVE 261
ETY ++ + +A ++K I +D F+ KAF A +AH GQ RA+G+PY+ H +
Sbjct: 51 ETYYEKAIEDAYEKLINRVKKYILNQDDINFIKKAFELANKAHSGQKRATGEPYIFHPLS 110
Query: 262 TAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAR 321
A +L+ + + + A LLHD +D + + I FG +A LV+GV+KLSQ +
Sbjct: 111 VAYILSELELDRNAIVAALLHDVAEDTDTTLEDIENQFGKEIAFLVDGVTKLSQFKYKNK 170
Query: 322 ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 380
E+ + + MFLAMA D R V+IKLADRLHNM TL KRQR AKET+EI
Sbjct: 171 EDQ------QLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEI 224
Query: 381 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALK 438
+ PLA+RLGI K +LE+LCF +L P+ + +L S++ E EA+V + L++ +
Sbjct: 225 YAPLAHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIVEDTMHVLKEKID 284
Query: 439 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 498
+ NI V+ GR K YSI+ KM + + +I+D+Y +R+IV+ CY L +VH LW
Sbjct: 285 ETNIK-AVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQCYAVLGIVHSLW 343
Query: 499 AEVPGKMKDYITRPKFNGY 517
+P + KDYI PK N Y
Sbjct: 344 KPLPKRFKDYIAVPKPNMY 362
>gi|205374215|ref|ZP_03227014.1| GTP diphosphokinase [Bacillus coahuilensis m4-4]
Length = 708
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 181/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A++AH+ Q R SG+PY++H ++ A +LA + ++ VAAG LHD ++D +S
Sbjct: 3 LVQKAYEYADKAHKEQFRKSGEPYIIHPIQVAGILADLEMDAATVAAGFLHDVVEDTPIS 62
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I TF VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 63 KQDIAETFNEEVAMLVDGVTKLGKIKFKSQEEQ------QAENHRKMFVAMAQDIRVILI 116
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R A ET+EIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 117 KLADRLHNMRTLKHLPAEKQRRIANETIEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 176
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + + D E V I ++E +L+D +I L GR K +YSI+ KM+ +
Sbjct: 177 YRIVNLMKKKRDEREQYVDDVIHEMEDSLRDVDI-HAELSGRPKHIYSIYRKMVLQNKQF 235
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 236 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 284
>gi|344996822|ref|YP_004799165.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor lactoaceticus
6A]
gi|343965041|gb|AEM74188.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
lactoaceticus 6A]
Length = 726
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 188/293 (64%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KAF A++ H GQ+R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKYHDGQVRSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 346
S + + R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 86 SLEDVEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 136
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N Y
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMY 309
>gi|78185706|ref|YP_378140.1| metal dependent phosphohydrolase [Synechococcus sp. CC9902]
gi|78170000|gb|ABB27097.1| metal dependent phosphohydrolase [Synechococcus sp. CC9902]
Length = 776
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/291 (43%), Positives = 174/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E ++ AF + H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 66 EALLVSAFDFGFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTD 125
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+S D I FG+ V +LVEGV+KL + R +A+ L MF+AMA D R V
Sbjct: 126 VSLDEIQEHFGSEVRELVEGVTKLGGIHFNDRTE------AQAENLRRMFMAMASDIRVV 179
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADR+HNM TL AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 180 LVKLADRVHNMRTLGALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPE 239
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
E+ ++ E + + L + L+ + + GR K LY I KM +++
Sbjct: 240 AFREIQQEVATKRSEREQRLGVTVGLLNERLQRAGLEGCEVSGRPKHLYGIWSKMERQQK 299
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+I + E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 300 AFHEIYDVAALRIITPSVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|338814984|ref|ZP_08626943.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
gi|337273028|gb|EGO61706.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
Length = 736
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 183/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ A AH+GQ+R SG+ Y++H V A +LA + ++T ++A +LHD ++D F+
Sbjct: 28 DLLRKAYAVACEAHKGQLRVSGEEYIIHPVGVAKILADLQIDATTISAAILHDVVEDTFI 87
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I + FG VA LV+GV+KLS++ ++E + + M LAMA D R VL
Sbjct: 88 TLEDIEKKFGKEVAMLVDGVTKLSRIEYKSKEEQ------QLENYRKMLLAMAKDLRVVL 141
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++R A+ETLEI+ PLA+RLG+S K ++E+L F++L P++
Sbjct: 142 IKLADRLHNMRTLKFMPEVKQKRIARETLEIYAPLAHRLGMSNIKWEMEDLSFRYLEPER 201
Query: 410 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL K+ + E ++ AI L L D I + GR K YSI+ KM K
Sbjct: 202 YYELVEKVKQKRQERQDIIDEAIRILSDRLADMGIKAEI-QGRPKHFYSIYKKMQKDHKD 260
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++EI+D+ +R++VE +DCY AL +VH LW +P + KDYI PK N Y
Sbjct: 261 INEIYDLSAVRVLVETVKDCYGALGIVHTLWKPIPLRFKDYIAMPKSNMY 310
>gi|22298127|ref|NP_681374.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
gi|22294305|dbj|BAC08136.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
Length = 752
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 186/292 (63%), Gaps = 11/292 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D V +AF A H+GQ RASG+PY+ H V A +L +G ++AAGLLHD ++D
Sbjct: 40 DDLVCRAFQFAYDLHQGQRRASGEPYIAHPVAVASILRDLGGGPALLAAGLLHDVIEDTA 99
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARA 347
++ + + FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R
Sbjct: 100 VTAEELAANFGAEVRQLVEGVTKLSKF-------NFSSKTERQAESFRRMFLAMAQDIRV 152
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+++KLADRLHNM TL+ LP +R+ A+ET ++F PLANRLGI K +LE+L FK+L P
Sbjct: 153 IVVKLADRLHNMRTLEYLPEDRRRAIAQETRDVFAPLANRLGIWRIKWELEDLAFKYLEP 212
Query: 408 DQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + + + E EA + AI+ L++ L +L + GR K LYSI+ KM++++
Sbjct: 213 EAYRRIQELVAEKRANREAQLQQAIQILQERLSGMGFGYLEISGRPKHLYSIYQKMMRQQ 272
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI G+R++V +++CY+AL VVH + VPG+ KDYI+ PK N Y
Sbjct: 273 KEFHEIYDIAGIRILVATKDECYRALAVVHDCFLSVPGRFKDYISLPKPNQY 324
>gi|312792967|ref|YP_004025890.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180107|gb|ADQ40277.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 726
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 188/293 (64%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KAF A++ H GQ+R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKYHDGQVRSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 346
S + + R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 86 SLEDVEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 136
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N Y
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMY 309
>gi|434400053|ref|YP_007134057.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
gi|428271150|gb|AFZ37091.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
Length = 745
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 185/315 (58%), Gaps = 11/315 (3%)
Query: 207 EGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLL 266
E L + K+ L Q + + + + +AF A + H GQ R SG+PY+ H V A LL
Sbjct: 13 ELELPHWLKDCLIENQSQKSDEQTNLICRAFNFAYQLHEGQYRKSGEPYIAHPVAVAGLL 72
Query: 267 AAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTA 326
+G +S +AAG LHD ++D ++ + I FG V LVEGV+KLS+ N +
Sbjct: 73 RDLGGDSVTIAAGFLHDVVEDTEVTPEEIEERFGTDVRQLVEGVTKLSKF-------NFS 125
Query: 327 SKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPL 384
SKT +A+ MFL+MA D R +++KLADRLHNM TL+ L K+QR A ET EIF PL
Sbjct: 126 SKTERQAENFRRMFLSMAKDIRVIVVKLADRLHNMRTLEHLKPEKQQRIALETREIFAPL 185
Query: 385 ANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNI 442
ANRLGI +K +LE+L FK+L P+ + E+ + + E E + E + L+ +
Sbjct: 186 ANRLGIGRFKWELEDLSFKYLEPEAYREIQALVAERRTDRETRIDKVTEIIRSRLQKLGV 245
Query: 443 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 502
+ L GR K LY I+ KM +++ EI DI +R+IVE E+CY++L VVH + +P
Sbjct: 246 NVFELKGRPKHLYGIYQKMQRQQKEFHEIFDIAAVRIIVETNEECYRSLAVVHDAFKPIP 305
Query: 503 GKMKDYITRPKFNGY 517
G+ KDYI PK N Y
Sbjct: 306 GRFKDYIGLPKPNRY 320
>gi|282897317|ref|ZP_06305319.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
gi|281197969|gb|EFA72863.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
Length = 756
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 174/289 (60%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V A A H GQ R SG+PY+ H V A LL +G N+ ++AAG LHD ++D ++
Sbjct: 42 LVCNALKFAYELHEGQHRKSGEPYIAHPVAVADLLKDLGGNAPMIAAGFLHDVVEDTEVT 101
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG V LVEGV+KLS++ N T+ +A+ MFL+MA D R +++
Sbjct: 102 IEEIEQKFGHEVRQLVEGVTKLSKI------NFTSKTESQAENFRRMFLSMAQDIRVIVV 155
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L PD +
Sbjct: 156 KLADRLHNMRTLQYMSETSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPDAY 215
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E E + A E L + ++ I L + GR K LYSI+ KM +++
Sbjct: 216 REIQEHVAEKRTAREEKLNKAKEVLRERIEQAGIKCLDISGRPKHLYSIYQKMQRQQKEF 275
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IVE E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 276 HEIYDLAALRIIVETNEECYRALAVVHDAFCPIPGRFKDYIGLPKPNRY 324
>gi|390437740|ref|ZP_10226267.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis sp. T1-4]
gi|389838856|emb|CCI30391.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis sp. T1-4]
Length = 765
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLTPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ + +S K ++ E+ + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRQVQLLVSEKRID--RESRIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|110798612|ref|YP_696617.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
gi|110673259|gb|ABG82246.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
Length = 726
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|374307479|ref|YP_005053910.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
gi|291166507|gb|EFE28553.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
Length = 733
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 179/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A H+ Q R SG+ Y++H VE A +LA + + +AAGLLHD L+D ++
Sbjct: 20 IVEKAYLHAYEGHKNQYRKSGEKYIIHPVEVAKILAELEMDMDTIAAGLLHDVLEDTDMT 79
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ + FG +ADLV+GV+KL Q+ +++ ++A+ MF AM D R VLI
Sbjct: 80 YEEMASEFGTTIADLVDGVTKLGQIKYQSKQE------MQAENFRKMFFAMGKDIRVVLI 133
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ +P K +KET EI+ P+ANRLGI K ++E+L ++L+PD +
Sbjct: 134 KLADRLHNMRTMKYMPKEKAIEKSKETAEIYAPIANRLGIFRIKWEMEDLALRYLDPDGY 193
Query: 411 TELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
EL+ K L E + S IE++E L++ +I+ + GR K YSI+ KM + T
Sbjct: 194 RELTEKVSLKRQEREKYIESVIEQIEVKLEENDIT-CDIKGRAKHFYSIYKKMKYQDKTF 252
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV+N +DCY A+ +VH +W +P + KDYI PK N Y
Sbjct: 253 EEIYDLMAVRIIVDNIKDCYGAVGLVHTIWKPIPTRFKDYIAMPKPNMY 301
>gi|168208638|ref|ZP_02634263.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
gi|170712986|gb|EDT25168.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
Length = 726
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|86158972|ref|YP_465757.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775483|gb|ABC82320.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 746
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +LA + + + V GLLHDT++D
Sbjct: 42 DLIKKAYVYSAKVHQGQIRKSGEPYLVHPLEVAGILAELKLDESSVVTGLLHDTIEDTLA 101
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DAR 346
+ I FG +ADLV+GV+KLSQ TA+ T E A+ M +AMA D R
Sbjct: 102 TKKEISELFGLEIADLVDGVTKLSQF--------TAANTQEEKQAENFRKMVVAMAKDIR 153
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+L+KLADR HNM TLDA+ ++R A+ETL+I+ PLANRLGI K +LE L FK+L
Sbjct: 154 VLLVKLADRTHNMRTLDAMKPESQERIARETLDIYAPLANRLGIQWIKTELEELSFKYLR 213
Query: 407 PDQHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P ++EL+ K+ V + E V +E + + L + + V GR K +YSI+ KM +
Sbjct: 214 PADYSELNEKVSVRAREKERFVAEVVEIIRRRLAEAGMKADV-SGRVKHVYSIYRKMRQL 272
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ ++I D+ G R+IV+ +CY++L VH LW VPG+ KDYI PK N Y
Sbjct: 273 DVDFEQIQDVIGFRVIVDTVAECYESLGFVHSLWKPVPGRFKDYIAIPKPNLY 325
>gi|182624408|ref|ZP_02952192.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
gi|177910411|gb|EDT72788.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
Length = 726
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|168214142|ref|ZP_02639767.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|168215563|ref|ZP_02641188.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
gi|170714350|gb|EDT26532.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|182382330|gb|EDT79809.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
Length = 726
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|168204879|ref|ZP_02630884.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|422346604|ref|ZP_16427518.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|422874854|ref|ZP_16921339.1| GTP pyrophosphokinase [Clostridium perfringens F262]
gi|170663656|gb|EDT16339.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|373226149|gb|EHP48476.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|380304188|gb|EIA16478.1| GTP pyrophosphokinase [Clostridium perfringens F262]
Length = 726
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 185/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|352684036|ref|YP_004896020.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
gi|350278690|gb|AEQ21880.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
Length = 740
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+FV +A+ A H Q RASG+PY++H + A +LA + + T +AA LHD ++D +
Sbjct: 28 EFVREAYNFAAEQHASQKRASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHDVVEDTDV 87
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA LV+GV+KL ++ ++RE + + MFLAMA D R VL
Sbjct: 88 TLDQLTDIFGLEVAGLVDGVTKLGKIEYISREEQ------QVENYRKMFLAMAKDIRVVL 141
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM T+ +P K++R + ETLEI+ PLA+RLGI K +LE+L F+++ P
Sbjct: 142 IKLADRLHNMRTMKYMPPNKQKRISSETLEIYAPLAHRLGIYAIKWELEDLSFRYMEPQH 201
Query: 410 HTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL K+ EAMV A+++L D I + GR KS YSI+ KM K +
Sbjct: 202 YYELVEQVKVKRHEREAMVQEAMDELSHLCSDSGIK-CEIQGRPKSFYSIYKKMQKDNKS 260
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++EI+D+ +R++V++ +DCY L +VH W +PG+ KDYI PK NGY
Sbjct: 261 INEIYDLLAVRVLVDSVKDCYGVLGIVHGKWRPIPGRFKDYIAVPKSNGY 310
>gi|153004178|ref|YP_001378503.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
gi|152027751|gb|ABS25519.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
Length = 738
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 178/290 (61%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A LLA + + V GLLHDT++D
Sbjct: 35 DLIKKAYVYSAKVHQGQIRKSGEPYLIHPLEVAGLLAELKLDEASVVTGLLHDTIEDTLA 94
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I FG +A+LV+GV+KLSQ S NT + +A+ M +AMA D R +L
Sbjct: 95 TKEEIAELFGPEIAELVDGVTKLSQFSA----ANTQEEK-QAENFRKMVVAMAKDIRVLL 149
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + ++R A+ETL+I+ PLANRLGI K +LE+L FK+L P
Sbjct: 150 VKLADRTHNMRTLDHMKPESQERIARETLDIYAPLANRLGIQWLKSELEDLSFKYLRPQD 209
Query: 410 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ELS+++ E V ++ + L I+ V GR K +YSI KM + +
Sbjct: 210 YVELSTRVEAEQKEKGEFVEEVVDLIRTRLTGAGINAQV-SGRVKHVYSIWRKMRQLDVD 268
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ G R+IV++ +CY++L ++H LW VPG+ KDYI PK N Y
Sbjct: 269 FDQIQDVIGFRVIVDSVAECYESLGIIHSLWKPVPGRFKDYIAIPKPNLY 318
>gi|113953676|ref|YP_731890.1| RelA/SpoT family protein [Synechococcus sp. CC9311]
gi|113881027|gb|ABI45985.1| RelA/SpoT family protein [Synechococcus sp. CC9311]
Length = 778
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 171/279 (61%), Gaps = 13/279 (4%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ D I FG V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPDQIESHFGPEV 139
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
+LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM T+
Sbjct: 140 RELVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTI 193
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP----DQHTELSSKLV 418
AL K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P + E+S+K
Sbjct: 194 GALKEEKQQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVSTKRS 253
Query: 419 ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 478
E D VT ++ L L + + GR K LY I KM +++ EI+D+ LR
Sbjct: 254 EREDRLSVT--VQLLCDRLAAVGLDSCEVSGRPKHLYGIWTKMQRQQKEFHEIYDVAALR 311
Query: 479 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 312 ILTPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|312127055|ref|YP_003991929.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
hydrothermalis 108]
gi|311777074|gb|ADQ06560.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
hydrothermalis 108]
Length = 722
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 186/293 (63%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KAF A++ H GQ R SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 22 NLIKKAFDFAQKYHDGQARNSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 346
S + + R FG +ADLV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 82 SLEDVEREFGKEIADLVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 132
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 133 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 192
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 193 PEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKQQ 252
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N Y
Sbjct: 253 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMY 305
>gi|408409949|ref|ZP_11181214.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
gi|407875894|emb|CCK83020.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
Length = 753
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NPD++
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYINPDEY 200
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++ S + E + AI+ L+ L I + + GR K +YSI+ KM+ K
Sbjct: 201 YKIVSMMDAKRSEREGYIKDAIDYLKGTLDSLGIDYDI-SGRPKHIYSIYKKMVNKHKDF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 NEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 308
>gi|425470826|ref|ZP_18849686.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9701]
gi|389883416|emb|CCI36194.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9701]
Length = 765
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 179/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ EA + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRAVQLLVSEKRID--REARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|227824350|ref|ZP_03989182.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904849|gb|EEH90767.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 725
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+FV +A+ A H Q RASG+PY++H + A +LA + + T +AA LHD ++D +
Sbjct: 13 EFVREAYNFAAEQHASQKRASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHDVVEDTDV 72
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA LV+GV+KL ++ ++RE + + MFLAMA D R VL
Sbjct: 73 TLDQLTDIFGLEVAGLVDGVTKLGKIEYISREEQ------QVENYRKMFLAMAKDIRVVL 126
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM T+ +P K++R + ETLEI+ PLA+RLGI K +LE+L F+++ P
Sbjct: 127 IKLADRLHNMRTMKYMPPNKQKRISSETLEIYAPLAHRLGIYAIKWELEDLSFRYMEPQH 186
Query: 410 HTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL K+ EAMV A+++L D I + GR KS YSI+ KM K +
Sbjct: 187 YYELVEQVKVKRHEREAMVQEAMDELSHLCSDSGIK-CEIQGRPKSFYSIYKKMQKDNKS 245
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++EI+D+ +R++V++ +DCY L +VH W +PG+ KDYI PK NGY
Sbjct: 246 INEIYDLLAVRVLVDSVKDCYGVLGIVHGKWRPIPGRFKDYIAVPKSNGY 295
>gi|196250100|ref|ZP_03148794.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
gi|196210284|gb|EDY05049.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
Length = 732
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 182/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ KA+ A++AHR Q R SG+PY++H ++ A +LA + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKQAHRDQFRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHDVVEDTEAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGADVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|409351741|ref|ZP_11234324.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
gi|407876538|emb|CCK86382.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
Length = 753
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NPD++
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYINPDEY 200
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++ S + E + AI+ L+ L I + + GR K +YSI+ KM+ K
Sbjct: 201 YKIVSMMDAKRSEREGYIKDAIDYLKGTLDSLGIDYDI-SGRPKHIYSIYKKMVNKHKDF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 NEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 308
>gi|427405631|ref|ZP_18895836.1| RelA/SpoT family protein [Selenomonas sp. F0473]
gi|425708472|gb|EKU71511.1| RelA/SpoT family protein [Selenomonas sp. F0473]
Length = 742
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ AE+AHRGQ R SG+ Y++H + A +L + + + A LLHD ++D
Sbjct: 28 DKIERAYRFAEKAHRGQARISGEAYIIHPLNVAYILTGLHMDDETICAALLHDVVEDTHA 87
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG +A L++GV+KL ++ +++E+ V+ + MFLAMA D R ++
Sbjct: 88 TIEEMEELFGKNIAALIDGVTKLGRIQYMSKED------VQLENYRKMFLAMAKDIRVIM 141
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + KRQR A ETLE++ PLANRLGIS K++LE+LC ++L P+
Sbjct: 142 IKLADRLHNMRTLKYMREDKRQRIAHETLEVYAPLANRLGISNIKIELEDLCLRYLEPEA 201
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L ++ E + +I ++++ L+D I + GR K YSI+ KM + +
Sbjct: 202 YYTLVEEVKHKRQERQEFILDSIRQIKEKLEDAGIEAEI-KGRAKHFYSIYRKMKRDNKS 260
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 261 VNEIYDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|440755832|ref|ZP_20935033.1| relA/SpoT family protein [Microcystis aeruginosa TAIHU98]
gi|440173054|gb|ELP52512.1| relA/SpoT family protein [Microcystis aeruginosa TAIHU98]
Length = 765
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAYKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|78213963|ref|YP_382742.1| metal dependent phosphohydrolase [Synechococcus sp. CC9605]
gi|78198422|gb|ABB36187.1| metal dependent phosphohydrolase [Synechococcus sp. CC9605]
Length = 758
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 178/295 (60%), Gaps = 17/295 (5%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E ++ AF + H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 47 EALLVSAFDFGFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTD 106
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ D I FG+ V +LVEGV+KL + R +A+ L MFLAMA D R V
Sbjct: 107 VTPDQIELHFGSEVRELVEGVTKLGGIHFNDR------TEAQAENLRRMFLAMASDIRVV 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 161 LVKLADRLHNMRTLGALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPE 220
Query: 409 Q----HTELSSKLVECFDEAMVTSAI--EKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
E+++K E VT + E+LE+A + + GR K L+ I KM
Sbjct: 221 AFREIQEEVATKRSEREQRLGVTVGLLNERLERA----GLDHCEVSGRPKHLFGIWSKMQ 276
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ EI+D+ LR++ N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 277 RQQKEFHEIYDVAALRILTPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 331
>gi|425452480|ref|ZP_18832297.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 7941]
gi|389765685|emb|CCI08474.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 7941]
Length = 765
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAYKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|269792823|ref|YP_003317727.1| (p)ppGpp synthetase I SpoT/RelA [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100458|gb|ACZ19445.1| (p)ppGpp synthetase I, SpoT/RelA [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 756
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 178/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A A AHR Q R SG+PY++H + A +LA +G + ++A LLHD L+D + +
Sbjct: 61 EALVFAANAHREQRRHSGEPYIVHSISVAAILADMGLDVETLSAALLHDVLEDTEVGKEE 120
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG GV +V+GV+KL +L+ + E+ +A+ L MFL MA D R VLIKLA
Sbjct: 121 MLSRFGEGVLTMVDGVTKLGKLAFKSMED------YQAENLRKMFLVMAKDIRVVLIKLA 174
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL A K+ AKETLEI+ PLA+RLGI K +LE+LCFK L PD + E+
Sbjct: 175 DRLHNMRTLQAHRRDKQITIAKETLEIYAPLAHRLGIYNVKRELEDLCFKILEPDIYYEI 234
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + EA++ A++ L+ LK++ I L GR K YSI+ KM +K L++D++
Sbjct: 235 RRRVRKKLPEREAIIKQALDVLQGKLKEEGIEAY-LSGRPKHFYSIYEKMRRKNLSLDQL 293
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ LR+IV +CYQ L +VH +W +PG+ DYI PK N Y
Sbjct: 294 YDLLALRVIVGTVAECYQVLGLVHTIWKPIPGQFDDYIANPKSNMY 339
>gi|81300186|ref|YP_400394.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
gi|81169067|gb|ABB57407.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
Length = 779
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 178/290 (61%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A H GQ RASG+PY+ H V A LL +G ++ V+ AG LHD ++D ++
Sbjct: 59 LIARAFRFAYSLHEGQYRASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEVT 118
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R +L
Sbjct: 119 PEEIEERFGAEVRQLVEGVTKLSKF-------NFSSKTEQQAENFRRMFLAMAQDIRVIL 171
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ L K++R AKET++IF PLANRLGI K +LE+L FK+L+ +Q
Sbjct: 172 VKLADRLHNMRTLEHLASTKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAEQ 231
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + E EA + +++ L L I + + GR K LYSI+ KM ++
Sbjct: 232 YRSIQGHVAEKRADREARLEQSVQILRDRLSQIGIEPVDVSGRPKHLYSIYRKMQMQQKE 291
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ LR+IV + ++CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 292 FHEIFDVAALRIIVNSNDECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 341
>gi|238854672|ref|ZP_04645002.1| GTP pyrophosphokinase [Lactobacillus jensenii 269-3]
gi|260664385|ref|ZP_05865237.1| ppGpp synthetase [Lactobacillus jensenii SJ-7A-US]
gi|238832462|gb|EEQ24769.1| GTP pyrophosphokinase [Lactobacillus jensenii 269-3]
gi|260561450|gb|EEX27422.1| ppGpp synthetase [Lactobacillus jensenii SJ-7A-US]
Length = 745
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 178/291 (61%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ AE+AH GQ RASG PY++H + A +A +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEYAEKAHSGQKRASGQPYIIHPTQVAGTVANLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I R FG VA +V+GV+KL++ + E A+ M +AMA D R +++
Sbjct: 87 NDDIKREFGEDVAFIVDGVTKLNKYEYKSHEE------FLAENHRKMLIAMAQDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ +
Sbjct: 141 KLADRLHNMHTLDHLRPDKQRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAY 200
Query: 411 ----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+++SK E E + +AI L+ L +I + + GR K +YSI+ KM+ K
Sbjct: 201 YNIVNQMNSKRSER--EGYIDTAITYLKDTLDGLHIKYDIY-GRPKHIYSIYKKMVNKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 258 DFSEIFDLLAVRVIVQNVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGY 308
>gi|56750188|ref|YP_170889.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
gi|56685147|dbj|BAD78369.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
Length = 764
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 178/290 (61%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A H GQ RASG+PY+ H V A LL +G ++ V+ AG LHD ++D ++
Sbjct: 44 LIARAFRFAYSLHEGQYRASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEVT 103
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R +L
Sbjct: 104 PEEIEERFGAEVRQLVEGVTKLSKF-------NFSSKTEQQAENFRRMFLAMAQDIRVIL 156
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ L K++R AKET++IF PLANRLGI K +LE+L FK+L+ +Q
Sbjct: 157 VKLADRLHNMRTLEHLASTKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAEQ 216
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + E EA + +++ L L I + + GR K LYSI+ KM ++
Sbjct: 217 YRSIQGHVAEKRADREARLEQSVQILRDRLSQIGIEPVDVSGRPKHLYSIYRKMQMQQKE 276
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ LR+IV + ++CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 277 FHEIFDVAALRIIVNSNDECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 326
>gi|354565208|ref|ZP_08984383.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
gi|353549167|gb|EHC18609.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
Length = 758
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 182/296 (61%), Gaps = 11/296 (3%)
Query: 226 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 285
K + + +AF A + H+GQ R SG+PY+ H + A +L +G ++ ++AAG LHD +
Sbjct: 38 KYYDTSLICRAFEFAYQLHQGQYRKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVV 97
Query: 286 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA- 343
+D ++ + I + FG+ V LVEGV+KLS++ N SKT +A+ MFLAMA
Sbjct: 98 EDTDVTIEEIEQRFGSEVRCLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQ 150
Query: 344 DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFK 403
D R +++KLADRLHNM TL+ +P KR+R A ET EIF PLANRLGI +K +LE+L FK
Sbjct: 151 DIRVIVVKLADRLHNMRTLEYMPEEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFK 210
Query: 404 HLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKM 461
+L P+ ++ + E E + E L L + I L + GR K LYSI+ KM
Sbjct: 211 YLEPEAFRQIQQLVSEKRTDREERLKKISETLRTRLAEAGIRCLDISGRPKHLYSIYQKM 270
Query: 462 LKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ EI+D+ LR+IV+ E+CY+AL VVH ++ +PG+ KDYI PK N Y
Sbjct: 271 QRQNKEFHEIYDLAALRIIVQTNEECYRALAVVHDVFRPIPGRFKDYIGLPKPNRY 326
>gi|425460758|ref|ZP_18840239.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9808]
gi|389826500|emb|CCI22900.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9808]
Length = 765
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAYKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|329121021|ref|ZP_08249652.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
gi|327471183|gb|EGF16637.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
Length = 783
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 188/319 (58%), Gaps = 19/319 (5%)
Query: 211 ETYAKEFLANA------QLKHKIFRED---FVIKAFYEAERAHRGQMRASGDPYLLHCVE 261
ETY ++ + +A ++K I +D F+ KAF A +AH GQ RA+G+PY+ H +
Sbjct: 51 ETYYEKAIEDAYKKLINRVKKYISNQDDINFIKKAFELANKAHSGQKRATGEPYIFHPLS 110
Query: 262 TAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAR 321
A +L+ + + + A LLHD +D + + I FG +A LV+GV+KLSQ +
Sbjct: 111 VAYILSELELDRNAIVAALLHDVAEDTDTTLEDIENQFGKEIAFLVDGVTKLSQFKYKNK 170
Query: 322 ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 380
E+ + + MFLAMA D R V+IKLADRLHNM TL KRQR AKET+EI
Sbjct: 171 EDQ------QLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEI 224
Query: 381 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALK 438
+ PLA+RLGI K +LE+LCF +L P+ + +L S++ E EA+V + L++ +
Sbjct: 225 YAPLAHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIVEDTMHVLKEKID 284
Query: 439 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 498
+ NI V+ GR K YSI+ KM + + +I+D+Y +R+IV+ CY L +VH LW
Sbjct: 285 ETNIK-AVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQCYAVLGIVHSLW 343
Query: 499 AEVPGKMKDYITRPKFNGY 517
+P + KDYI PK N Y
Sbjct: 344 KPLPKRFKDYIAVPKPNMY 362
>gi|138896146|ref|YP_001126599.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
gi|134267659|gb|ABO67854.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
Length = 732
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 181/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ KA+ A+ AHR Q R SG+PY++H ++ A +LA + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHDVVEDTEAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGADVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|365840434|ref|ZP_09381623.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
gi|364561473|gb|EHM39373.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
Length = 734
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 180/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A AH+ Q R SG+PY+LH + A +LA + ++T + A L+HD ++D + +
Sbjct: 31 KAYELANDAHKEQKRVSGEPYILHPLAVAQILADMEIDTTTITASLMHDVVEDTTYTLED 90
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL++L +E+ + + + MFLAMA D R V+IKLA
Sbjct: 91 MERLFGKEVAFLVDGVTKLNRLDYRTKEDQ------QVNSMRKMFLAMAKDVRVVVIKLA 144
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K++R A+ETLEI+ PLA+RLGI K +LE+L F+++ PD++ +L
Sbjct: 145 DRLHNMRTLKFMRSEKQKRIAQETLEIYAPLAHRLGIFNIKWELEDLSFRYMEPDKYYDL 204
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ E E +V AI+ L++ L + ISF + GR K YSI+ KM K + +I
Sbjct: 205 VDQMKEKRQVREEIVNEAIDVLKETLSESGISFEI-NGRPKHFYSIYKKMKKDNRDLSQI 263
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+Y +R+IV +DCY L +VH LW +P + KDYI PK N Y
Sbjct: 264 YDLYAIRVIVNTVQDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNY 309
>gi|427412621|ref|ZP_18902813.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
gi|425716428|gb|EKU79412.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
Length = 744
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 194/329 (58%), Gaps = 19/329 (5%)
Query: 192 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 251
++D+ FN E + +L + +L A K +++AF A++AH Q RAS
Sbjct: 9 VIVDQPVFNKEVEL--AHLMEIVRSYLDEADCKE-------IMRAFEVADKAHAPQKRAS 59
Query: 252 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 311
G+PY+LH + A +LA + ++T V A LLHD ++D + I FG VA LV+GV+
Sbjct: 60 GEPYILHPLAVATILANLQIDATTVIAALLHDVVEDTEYTLPQIEELFGKEVAFLVDGVT 119
Query: 312 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 370
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 120 KLNQFQYHTKEDQ------QLENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 173
Query: 371 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAMVTS 428
+R A+ETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ E E +V
Sbjct: 174 KRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVEQMQEKRHVREEIVND 233
Query: 429 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 488
+E+L++AL+D +I V GR K YSI+ KM K + +I+D+Y +R+IV+ DCY
Sbjct: 234 TMEQLKKALEDAHIKADV-KGRPKHFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIPDCY 292
Query: 489 QALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L +VH LW +P + KDYI PK N Y
Sbjct: 293 AVLGIVHNLWKPLPYRFKDYIAMPKSNMY 321
>gi|428776221|ref|YP_007168008.1| (p)ppGpp synthetase I SpoT/RelA [Halothece sp. PCC 7418]
gi|428690500|gb|AFZ43794.1| (p)ppGpp synthetase I, SpoT/RelA [Halothece sp. PCC 7418]
Length = 765
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 184/305 (60%), Gaps = 13/305 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A H GQ R SG+PY+ H V A L+ +G S ++AAG LHD ++D ++
Sbjct: 47 LIAEAFQFAYNLHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIAAGFLHDIVEDTDIT 106
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FG GV LVEGV+KLS+ +SKT +A+ MFLAMA D R V+
Sbjct: 107 CEEIQEKFGEGVRHLVEGVTKLSKFK-------FSSKTERQAENFRRMFLAMAKDIRVVV 159
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ L K+++ A ET EIF PLANRLGI +K +LE+L FK+L P+
Sbjct: 160 VKLADRLHNMRTLEHLKPEKQKQIALETREIFAPLANRLGIGRFKWELEDLSFKYLEPEA 219
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
E+ + + EA + + I+ L Q I L GR K LY I+ KM +++
Sbjct: 220 FQEIRELVADRRADREARIENVIQILHQRFDQAGIEIEELKGRPKHLYGIYQKMQQQQKE 279
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY--IFSQVVLS 525
+EI+D+ G+R+I++ EDCY+AL V+H + +PG+ KDYI PK N Y + + V+ +
Sbjct: 280 FEEIYDLAGVRVILKTREDCYRALAVIHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVIGT 339
Query: 526 YERNI 530
Y + I
Sbjct: 340 YGKPI 344
>gi|428770116|ref|YP_007161906.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium aponinum PCC 10605]
gi|428684395|gb|AFZ53862.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium aponinum PCC
10605]
Length = 751
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 183/291 (62%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + +AF A H GQMR SG+PY+ H + A LL +G +S ++AAG LHD ++D
Sbjct: 38 NLICRAFQFAYSLHEGQMRKSGEPYIAHPIAVAELLRDLGGDSEMIAAGFLHDVVEDTPT 97
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V LVE V+KLS+ N +SKT +A+ MF+AMA D R +
Sbjct: 98 TPEDIEVMFGKNVRQLVEAVTKLSKF-------NFSSKTERQAENFRRMFIAMAQDIRVI 150
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TLD LP K++ A+ET EIF PLANRLGI +K +LE+L FK+L+P+
Sbjct: 151 VVKLADRLHNMRTLDFLPPEKQRLIAEETKEIFAPLANRLGIWHFKWELEDLSFKYLHPE 210
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ + + E EA + + I+ + Q L++ I + + GR K LY I+ KM+++K
Sbjct: 211 AYNKIKNLIAERRTDREARIENVIDTINQRLENLGIHPVEVKGRPKHLYGIYHKMMRQKK 270
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IV ++CY+ L VVH + +PG+ KDYI PK N Y
Sbjct: 271 EFEQIYDIAAVRIIVNTNDECYRTLAVVHDAFRPIPGRFKDYIGLPKPNLY 321
>gi|312110098|ref|YP_003988414.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|336234522|ref|YP_004587138.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719137|ref|ZP_17693319.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215199|gb|ADP73803.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|335361377|gb|AEH47057.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368040|gb|EID45315.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 731
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A+RAHR Q R SG+PY++H ++ A +L + + +AAG LHD ++D
Sbjct: 26 EFIKKAYEFADRAHRDQYRKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHDVVEDTEA 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + R FG+ VA LV+GV+KL ++ ++E +A+ MFLAMA D R +L
Sbjct: 86 TKEDLEREFGSEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 200 YYRIVNLMKKKRAEREQYLEEVIQEVRERLNEVSIPCEIY-GRPKHIYSIYRKMVMQNKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|451819384|ref|YP_007455585.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785363|gb|AGF56331.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 737
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 183/294 (62%), Gaps = 15/294 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+Y AE AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 DMVKKAYYFAEDAHKEQKRQSGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTEF 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SY+ + F + +L+EGV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SYEETVKLFNEEIGNLIEGVTKLTRLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ EL + E + + +V KL+ A + +I GR K YSI+ KM+
Sbjct: 196 YYELVDSIAEKRVERETYIKDIVDDLYAKLQAAGIESDID-----GRPKHFYSIYKKMVN 250
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 KNKSIEQIFDLTAIRILVNSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMY 304
>gi|425440615|ref|ZP_18820913.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9717]
gi|389718904|emb|CCH97199.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9717]
Length = 765
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 179/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLISRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLTPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ EA + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--REARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|225593179|gb|ACN96096.1| (p)ppGpp synthetase I [Fischerella sp. MV11]
Length = 758
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 182/296 (61%), Gaps = 11/296 (3%)
Query: 226 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 285
K + + +AF A + H+GQ R SG+PY+ H + A +L +G ++ ++AAG LHD +
Sbjct: 37 KYYDTSLICRAFEFAYQLHQGQYRKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVV 96
Query: 286 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA- 343
+D ++ + I + FG+ V LVEGV+KLS++ N SKT +A+ MFLAMA
Sbjct: 97 EDTDVTIEEIEQRFGSEVRCLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQ 149
Query: 344 DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFK 403
D R +++KLADRLHNM TL+ +P KR+R A ET EIF PLANRLGI +K +LE+L FK
Sbjct: 150 DIRVIVVKLADRLHNMRTLEYMPDEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFK 209
Query: 404 HLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKM 461
+L P+ ++ + E E + E L L + I L + GR K LYSI+ KM
Sbjct: 210 YLEPEAFRQIQQLVSEKRTDREERLKKISETLRTRLAEAGIRCLDISGRPKHLYSIYQKM 269
Query: 462 LKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ EI+D+ LR+IV+ E+CY+AL VVH ++ +PG+ KDYI PK N Y
Sbjct: 270 QRQNKEFHEIYDLAALRIIVQTNEECYRALAVVHDVFRPIPGRFKDYIGLPKPNRY 325
>gi|239908231|ref|YP_002954972.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
gi|239798097|dbj|BAH77086.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
Length = 740
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH GQ+R SG+PYL H +E A +LA + ++ +A+GLLHDT++D +
Sbjct: 22 IITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLDAASIASGLLHDTVEDTKAT 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VAD+V+GV+K+S + +E +A+ + M LAMA D R VL+
Sbjct: 82 VDEIEELFGEEVADIVDGVTKISLIPFETKEE------AQAENIRKMILAMAEDIRVVLV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ K+ A+ET++I+ PLANRLG+ K +LE+ F++L PD +
Sbjct: 136 KLADRLHNMRTLEFQKPHKQALIAQETMDIYAPLANRLGLHRIKTELEDWSFRYLKPDIY 195
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L + DE + I L + L NI ++ GR K L+S+H KM + LT+
Sbjct: 196 AQLVEGVATHHTVDETFIERVIGHLNELLGPNNIKARIV-GRRKHLWSVHNKMRVQGLTI 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++HD+ R+IVE +CY L +VH LW VPG+ KDYI+ PK N Y
Sbjct: 255 DQVHDLVAFRVIVETIRECYHVLGLVHSLWKPVPGRFKDYISMPKANMY 303
>gi|333979510|ref|YP_004517455.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822991|gb|AEG15654.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 724
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 181/286 (63%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AE+AHR Q R SG+P++ H V A +LA + + + AGLLHD ++D ++ +
Sbjct: 32 KAYRFAEQAHRDQKRISGEPFITHPVAVAHILANLQMDLQTLVAGLLHDVVEDTGVTLEE 91
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I FG VA LV+GV+KLS+L ++E + +A+ L MFLAMA D R +LIKLA
Sbjct: 92 IKTAFGDEVALLVDGVTKLSRLEYRSKEEH------QAENLRKMFLAMAQDIRVILIKLA 145
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHN+ TL K++ A+ETLEI+ PLA+RLGI K +LE+L F++L P+++ EL
Sbjct: 146 DRLHNLRTLKYHTETKQKEIARETLEIYAPLAHRLGIYHLKWELEDLSFRYLEPEKYYEL 205
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ ++ E + +AI+ L + L + I F + GR K LYSI+ KM K++ + EI
Sbjct: 206 AERVSRTRRKREEYIRTAIQILRRKLAEAGI-FADIQGRPKHLYSIYTKMEKQQKDLSEI 264
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ +R+IVE+ DCY L VH LW +PG+ KDYI PK N Y
Sbjct: 265 YDVMAVRVIVESIRDCYAVLGTVHTLWKPIPGRFKDYIAMPKSNMY 310
>gi|284928658|ref|YP_003421180.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
gi|284809117|gb|ADB94822.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
Length = 745
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 180/292 (61%), Gaps = 11/292 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D + AF A + H+GQ R SG+PY++H V A +L +G + +++AAG LHD ++D
Sbjct: 36 QDLICHAFDFAYQLHKGQYRKSGEPYIVHPVTVAGILRDLGGDKSMIAAGFLHDVVEDTD 95
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARA 347
++ D I FG V LVEGV+KLS+ N ++KT +A+ MFLAMA D R
Sbjct: 96 ITADNIEEMFGQEVRLLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRV 148
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+++KLADRLHNM TLDAL K++R A ET EIF PLANRLGI K +LE+L FK+L
Sbjct: 149 IVVKLADRLHNMRTLDALKPEKQKRIALETKEIFSPLANRLGIWRVKWELEDLSFKYLET 208
Query: 408 DQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + E+ + E EA + + L++ L I L L GR K LY I+ KM +
Sbjct: 209 NAYWEIQGLVAEKRIDREARIENVKNILQKRLNSIGIQVLELQGRSKHLYGIYYKMHSQN 268
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+N+E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 269 KGFHEIYDLAALRIIVQNKEECYRALAVVHDTFKPMPGRFKDYIGLPKPNRY 320
>gi|357054508|ref|ZP_09115592.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
2_1_49FAA]
gi|355384480|gb|EHG31545.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
2_1_49FAA]
Length = 761
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 186/286 (65%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A+ AH+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++ +
Sbjct: 48 KAYRIADEAHKEQKRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMTLEQ 107
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG+ V+ LV+GV+KL+QL+ + ++AD L MFLAMA D R ++IKLA
Sbjct: 108 LTKEFGSEVSFLVDGVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLA 162
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L
Sbjct: 163 DRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLQPDVYYDL 222
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K+ D EA V +++++ ++D I V GR K +SI+ KM+ + T+D+I
Sbjct: 223 VEKVALRKDTREAFVQEIVDEVKSHMEDAGIEATV-GGRVKHFFSIYKKMVNQNKTLDQI 281
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ +R++VE +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 282 YDLFAVRIMVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMY 327
>gi|225850169|ref|YP_002730403.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
gi|225646582|gb|ACO04768.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
Length = 716
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 177/285 (62%), Gaps = 11/285 (3%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
A+Y E+ H GQ R SG+PY +H +E A +LA + + T + AGLLHD ++D + D I
Sbjct: 32 AYYIIEK-HEGQFRKSGEPYYIHPIEAAKVLADLKLDRTTIIAGLLHDVVEDTDTTIDEI 90
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
FG VA +V+GV+K+ + N + + EA+ M ++MA D R +L+KLAD
Sbjct: 91 KERFGETVALIVDGVTKIGKY------NFNSKEEAEAENFRKMLVSMAKDIRVILVKLAD 144
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHN+ TLD LP K++R AKETL+I+ PLA RLG+ K +LE+ FK+L P+ + +++
Sbjct: 145 RLHNIRTLDPLPEYKQKRIAKETLDIYAPLAARLGLWKIKAELEDTSFKYLYPEAYKKIT 204
Query: 415 SKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 472
+ L E E + I ++ L NI + R K LYSI+ K L+K L++ +I+
Sbjct: 205 TYLAESKTVQEKYLQEIISQIRDVLDKHNIKADIQY-RAKHLYSIYEKTLRKDLSLSDIY 263
Query: 473 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+YG+R++V +DCY AL ++H LW VPG+ KDYI+ PK N Y
Sbjct: 264 DVYGVRVLVHTIKDCYLALGLIHSLWPPVPGRFKDYISLPKSNMY 308
>gi|256851206|ref|ZP_05556595.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260660630|ref|ZP_05861545.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
gi|256616268|gb|EEU21456.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260548352|gb|EEX24327.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
Length = 747
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 178/291 (61%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV +A+ A++AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 30 FVERAYEYADKAHSGQKRASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 89
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I R FG VA +V+GV+KL++ + E A+ M +AMA D R +++
Sbjct: 90 NDDIKREFGEDVAFIVDGVTKLNKYEYKSHEE------FLAENHRKMLIAMAKDLRVIMV 143
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ +
Sbjct: 144 KLADRLHNMHTLDHLRPDKQRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAY 203
Query: 411 ----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+++SK E E + +AI L+ L +I + + GR K +YSI+ KM+ K
Sbjct: 204 YNIVNQMNSKRSER--EGYIETAIAYLKDTLDSLHIKYDIY-GRPKHIYSIYKKMVNKHK 260
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 261 DFSEIFDLLAVRVIVQNVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGY 311
>gi|443474532|ref|ZP_21064506.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
gi|443020698|gb|ELS34625.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
Length = 761
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 187/316 (59%), Gaps = 9/316 (2%)
Query: 205 IVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAM 264
+V+ ++ + + +Q + ED V +A A R H GQ RASG+PY+LH + A
Sbjct: 34 VVDASIPDWLRSGWEKSQRGEILENEDVVCRALDFAYRLHDGQCRASGEPYILHPISVAA 93
Query: 265 LLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN 324
+L +G ++ ++AAG LHD ++D +S D I FG + LVEGV+K LSKL+ E+
Sbjct: 94 ILKDLGGSNAMIAAGFLHDVVEDTDVSCDQIEEKFGKEIRQLVEGVTK---LSKLSFESK 150
Query: 325 TASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 383
T S +A+ MFLAMA D R +++KLADRLHNM TL L K+ ++ET EIF P
Sbjct: 151 TES---QAENFRRMFLAMAQDIRVIIVKLADRLHNMRTLQHLRSEKQVLISRETREIFAP 207
Query: 384 LANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKN 441
LANRLG+ K +LE++ FK++ P+Q+ + S + E + + +T + L L
Sbjct: 208 LANRLGLGQIKWELEDIAFKYIEPEQYQMMESLVAETHESRQEQLTEVTKVLGDRLASMG 267
Query: 442 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 501
I + GR K LY I KM ++K +EI+DI +R+IV +E+CY+ L VVH + +
Sbjct: 268 IDDFEISGRPKHLYGIFRKMERQKKQYNEIYDIQAVRVIVNTKEECYRVLAVVHDHFCPI 327
Query: 502 PGKMKDYITRPKFNGY 517
PG+ KDYI PK N Y
Sbjct: 328 PGRFKDYIGLPKPNRY 343
>gi|160936541|ref|ZP_02083908.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
gi|158440332|gb|EDP18077.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
Length = 761
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 186/286 (65%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A+ AH+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++ +
Sbjct: 48 KAYRIADEAHKEQKRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMTLEQ 107
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG+ V+ LV+GV+KL+QL+ + ++AD L MFLAMA D R ++IKLA
Sbjct: 108 LTKEFGSEVSFLVDGVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLA 162
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L
Sbjct: 163 DRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLQPDVYYDL 222
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K+ D EA V +++++ ++D I V GR K +SI+ KM+ + T+D+I
Sbjct: 223 VEKVALRKDTREAFVQEIVDEVKSHMEDAGIESTV-GGRVKHFFSIYKKMVNQNKTLDQI 281
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ +R++VE +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 282 YDLFAVRIMVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMY 327
>gi|225376526|ref|ZP_03753747.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
16841]
gi|225211625|gb|EEG93979.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
16841]
Length = 768
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 196/310 (63%), Gaps = 9/310 (2%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E +E +A+ + H + KA+ A AH+GQ+R SG+PY++H + A++LA +
Sbjct: 30 EKLYQELIASVRKYHPSTDISLIEKAYNIAYEAHKGQVRKSGEPYIIHPLCVAIILAELE 89
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 330
+ + AGLLHD ++D ++ + I + FGA VA LV+GV+KL QLS + V
Sbjct: 90 LDKETIVAGLLHDVVEDTVMTDEEIKQEFGAEVALLVDGVTKLGQLS-----YDADKVEV 144
Query: 331 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 389
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLG
Sbjct: 145 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPIAQRLG 204
Query: 390 ISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVL 447
IS K++L++L K+L P+ + +L ++ + + V S +E++++ + + I +
Sbjct: 205 ISKIKIELDDLSLKYLEPEAYYDLVHQIAQRKSVRDDYVQSLVEEVKKHIHEAGIPAQI- 263
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K +SI+ KM + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KD
Sbjct: 264 DGRAKHFFSIYKKMKNQDKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRFKD 323
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 324 YIAMPKPNMY 333
>gi|239624473|ref|ZP_04667504.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47_FAA]
gi|239520859|gb|EEQ60725.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47FAA]
Length = 765
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 186/286 (65%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A AH+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++ D
Sbjct: 52 KAYRIANEAHKEQKRKSGEPYIIHPLCVAIVLADLEMDKETIAAGLLHDVVEDTIMTLDQ 111
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG+ V+ LV+GV+KL+QL+ + ++AD L MFLAMA D R ++IKLA
Sbjct: 112 LTKEFGSEVSFLVDGVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLA 166
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L
Sbjct: 167 DRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLKPDVYYDL 226
Query: 414 SSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K L + EA V +++++ +K+ + V GR K +SI+ KM+ + T+D+I
Sbjct: 227 VEKVDLRKDAREAFVQEIVDEVKNHMKEAGVDATV-GGRVKHFFSIYKKMVNQNKTLDQI 285
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ +R++V+N +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 286 YDLFAVRIMVDNVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMY 331
>gi|403668327|ref|ZP_10933602.1| GTP pyrophosphokinase [Kurthia sp. JC8E]
Length = 730
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 183/289 (63%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV +A+ A AH+ Q R+SG+PY++H ++ A +LA + + V+AG LHD ++D ++
Sbjct: 27 FVQRAYELARDAHKEQFRSSGEPYIVHPIQVAGILAELQMDPETVSAGFLHDVVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG VA LV+GV+KL ++ ++ K +A+ MF+AMA D R +LI
Sbjct: 87 REDLVEQFGEEVAMLVDGVTKLGKIKYKSK------KEQQAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP+ K++R +KETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRISKETLEIFAPLAHRLGISAIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K EA + + ++++ + L D +I L GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKRKRTEREAYLQNVMDEITEQLDDVSIP-ADLSGRPKHIYSIYNKMQSQHKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV++ +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRVIVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLY 308
>gi|409997388|ref|YP_006751789.1| GTP pyrophosphokinase [Lactobacillus casei W56]
gi|406358400|emb|CCK22670.1| GTP pyrophosphokinase [Lactobacillus casei W56]
Length = 787
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 72 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 131
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 132 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 185
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 186 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 245
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 246 YRIAHLMNSKRTER--EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 302
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 303 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 353
>gi|429735228|ref|ZP_19269197.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429159340|gb|EKY01855.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 743
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ AE+AH GQ+R SGD Y++H + A +L + + + A LLHD ++D
Sbjct: 28 DKIRKAYAYAEQAHSGQVRISGDAYIIHPLNVAYILTGLHLDDETICAALLHDVVEDTCA 87
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG + L++GV+KL ++ +++E+ V+ + MFLAMA D R ++
Sbjct: 88 TLEEMEAEFGKNIMALIDGVTKLGRIEYMSKED------VQLENYRKMFLAMAKDIRVIM 141
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + KRQR AKETLE++ PLANRLGIS KV+LE+LC ++L P+
Sbjct: 142 IKLADRLHNMRTLKYMREDKRQRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEA 201
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L ++ E + +IE++ + L+ I + GR K YSI+ KM + +
Sbjct: 202 YYTLVEEVKHKRKERQEFIRESIEQIREKLEAAGIKAEI-KGRAKHFYSIYRKMKRDNKS 260
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 261 VNEIYDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|395242383|ref|ZP_10419380.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480115|emb|CCI85620.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
Length = 743
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 27 FVKKAYNYANKAHEGQTRASGQPYIIHPTQVAGTLANLGLDQDTIAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDDIKKEFGEDVAFIVDGVTKLNKYQY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNPD +
Sbjct: 141 KLADRLHNMHTLNHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNPDAY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ S L E+ + I L++ L I + V GR K +YSI+ KM+ K
Sbjct: 201 YRIVSLMDLKRSERESYIAETISVLKKTLDSLGIKYEVY-GRPKHIYSIYKKMVDKHKDF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 NEIYDLLAVRVLVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGY 308
>gi|166368056|ref|YP_001660329.1| GTP pyrophosphokinase [Microcystis aeruginosa NIES-843]
gi|166090429|dbj|BAG05137.1| GTP pyrophosphokinase [Microcystis aeruginosa NIES-843]
Length = 765
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 178/293 (60%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ EA + + L + L + I L L GR K LY I+ KM +
Sbjct: 221 AYRAVQLLVSEKRID--REARIETVTNTLREKLPEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|186685647|ref|YP_001868843.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc punctiforme PCC 73102]
gi|186468099|gb|ACC83900.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc punctiforme PCC 73102]
Length = 757
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 179/290 (61%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H+GQ R SG+PY+ H + A LL +G ++ ++AAG LHD ++D ++
Sbjct: 43 LIGRAFEFAYQLHQGQYRKSGEPYIAHPIAVADLLHDLGGSAAMIAAGFLHDVVEDTEVT 102
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FGA V LVEGV+KLS++ N T+ +A+ MFLAMA D R +++
Sbjct: 103 SQEIEERFGAEVRQLVEGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVV 156
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD-- 408
KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 157 KLADRLHNMRTLQYMSEASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEAF 216
Query: 409 -QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
Q EL S+ +E + A L++ L+ I F + GR K LYSI+ KM +++
Sbjct: 217 RQMQELVSEKRTAREEKL-ARATNMLQERLQQAGIRFQDISGRPKHLYSIYQKMHRQQKE 275
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV++ E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 276 FHEIYDLAALRIIVQSNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 325
>gi|425464751|ref|ZP_18844061.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9809]
gi|389833148|emb|CCI22581.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9809]
Length = 765
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 178/293 (60%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ EA + + L + L + I L L GR K LY I+ KM +
Sbjct: 221 AYRAVQLLVSEKRID--REARIETVTNTLREKLPEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|417965159|ref|ZP_12606749.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-4]
gi|418372784|ref|ZP_12964876.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|380338744|gb|EIA27606.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-4]
gi|380342453|gb|EIA30898.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 721
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 DSIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y I TFG VA LVEGVSKL +++ +E +A + M +AM D R +L
Sbjct: 78 TYSDIATTFGEEVAILVEGVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVIL 131
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEHKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +++ + E D E + I + ++ L + N++ ++ GR K LYSI+ K+++K T
Sbjct: 192 YYKIAKLVSEKRDDREKLTNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKT 250
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI D+ +R+IV+N ++CY AL + H+ + + K KDYI PK N Y
Sbjct: 251 IDEIFDLIAIRVIVDNIKNCYIALGLAHEKYNPISNKFKDYIAMPKSNNY 300
>gi|332981509|ref|YP_004462950.1| (p)ppGpp synthetase I SpoT/RelA [Mahella australiensis 50-1 BON]
gi|332699187|gb|AEE96128.1| (p)ppGpp synthetase I, SpoT/RelA [Mahella australiensis 50-1 BON]
Length = 719
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 183/301 (60%), Gaps = 12/301 (3%)
Query: 222 QLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAG 279
+LK ED ++ KA+ AE AHRGQ R SG+ Y++H V+ A++LA +G +++ + AG
Sbjct: 8 RLKQSYTSEDVEYINKAYEFAENAHRGQARVSGEAYIIHPVQVALILADLGMDASTICAG 67
Query: 280 LLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMF 339
LLHD L+D +YD + + FG +ADLVEGV+KL +L + K +A+ L MF
Sbjct: 68 LLHDVLEDTDYTYDDLAKLFGKEIADLVEGVTKLGKL------EFQSKKEAQAENLRKMF 121
Query: 340 LAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 398
+AMA D R ++IKLADRLHNM TL L + R A+ET+EI+ PLA+RLGI K +LE
Sbjct: 122 IAMAKDVRVIMIKLADRLHNMRTLRYLDKESQLRNAQETMEIYAPLAHRLGIFKIKWELE 181
Query: 399 NLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 456
+L ++L+P+ + +L K+ E + I L++ + + I V GR K YS
Sbjct: 182 DLSLRYLDPEAYYDLVDKVAAKRKQREEYINQVITALKERIAETGIEATV-DGRPKHFYS 240
Query: 457 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 516
I+ KM + ++I+D+ +R+IV DCY L ++H +W +PG+ KDYI PK N
Sbjct: 241 IYKKMKYQGKAFEQIYDLMAVRVIVNTVRDCYAVLGLIHTIWKPIPGRFKDYIAVPKPNM 300
Query: 517 Y 517
Y
Sbjct: 301 Y 301
>gi|292670701|ref|ZP_06604127.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
gi|292647647|gb|EFF65619.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
Length = 746
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 182/288 (63%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+ KA+ AE+AHRGQ+R SGD Y++H + A +L + + V A LLHD ++D +
Sbjct: 33 IKKAYSFAEQAHRGQVRISGDAYIMHPLNVAYILTGLHLDDETVCAALLHDVVEDTHATL 92
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + FG + L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IK
Sbjct: 93 EEMEAEFGRNIMALIDGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIK 146
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL + KR+R AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ +
Sbjct: 147 LADRLHNMRTLKYMREDKRRRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYY 206
Query: 412 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L ++ E + +I+K+ + L+ +I + GR K YSI+ KM + +++
Sbjct: 207 ALVEEVKHKRQERQEFILDSIQKIHEKLEAADIKAEI-KGRAKHFYSIYRKMKRDNKSVN 265
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 266 EIYDLSAVRILVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 313
>gi|443315184|ref|ZP_21044689.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
gi|442785224|gb|ELR95059.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
Length = 762
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 180/291 (61%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +AF A H+GQMRASG+PY+ H + A LL +G +S ++AAG LHD ++D +
Sbjct: 45 ELVCRAFEFAYALHQGQMRASGEPYICHPIAVASLLRDLGGDSAMIAAGFLHDIVEDTDV 104
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V LVEGV+KLS+ N SKT +A+ MFLAMA DAR +
Sbjct: 105 TPEEIEAQFGGEVRRLVEGVTKLSKF-------NFQSKTERQAENFRRMFLAMAQDARVI 157
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L K++R A+ET EIF PLANRLGI +K +LE+L FK+L PD
Sbjct: 158 VVKLADRLHNMRTLEHLKPEKQRRIAQETSEIFAPLANRLGIGRFKWELEDLSFKYLEPD 217
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + + E E+ + L + L++ + + + GR K LY I+ KM +++
Sbjct: 218 AYRHMQDCVSEKRTDRESRLQLVAATLRERLEEAGVKVVEVSGRPKHLYGIYRKMERQQK 277
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ +R+IV N+++CY+ L +VH + +PG+ KDYI PK N Y
Sbjct: 278 AFHEIFDVAAVRVIVHNKDECYRTLAIVHDAFRPIPGRFKDYIGLPKPNRY 328
>gi|417989775|ref|ZP_12630276.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|417993039|ref|ZP_12633390.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|417996397|ref|ZP_12636677.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|418015214|ref|ZP_12654791.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
gi|410532448|gb|EKQ07156.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|410535519|gb|EKQ10140.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|410537520|gb|EKQ12094.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|410552038|gb|EKQ26077.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
Length = 742
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIDEIEKALTDLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 308
>gi|220929370|ref|YP_002506279.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium cellulolyticum H10]
gi|219999698|gb|ACL76299.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulolyticum H10]
Length = 726
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 180/286 (62%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ ++ AH GQ R SG+PY++H +E A++LA + + T + A LLHDT++D +YD
Sbjct: 26 KAYVVSKTAHMGQQRISGEPYIIHPLEVAVILAEMELDCTALIAALLHDTIEDTTCTYDE 85
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA+LV+GV+KL ++ +E + + L MFLAMA D R ++IKLA
Sbjct: 86 LKAQFGQEVAELVDGVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLA 139
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L
Sbjct: 140 DRLHNMRTLKYMSEGKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDL 199
Query: 414 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K+ EA +T IE L + + I + GR K YSI+ KM+K+ T+++I
Sbjct: 200 VEKINTKRKQREAYITKIIETLREKTNELGIENAQIDGRPKHFYSIYRKMVKQNKTLEQI 259
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ R+IV + +DCY L +VH+L+ + G+ KDYI PK N Y
Sbjct: 260 YDLFAFRIIVNSVKDCYAVLGLVHELYKPMSGRFKDYIAMPKPNMY 305
>gi|342732530|ref|YP_004771369.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455923|ref|YP_005668518.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|418016067|ref|ZP_12655632.1| GTP diphosphokinase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|342329985|dbj|BAK56627.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345506402|gb|EGX28696.1| GTP diphosphokinase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984266|dbj|BAK79942.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-mouse-Yit]
Length = 721
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 DSIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y I TFG VA LVEGVSKL +++ +E +A + M +AM D R +L
Sbjct: 78 TYSDIATTFGEEVAILVEGVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVIL 131
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEHKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +++ + E D E + I + ++ L + N++ ++ GR K LYSI+ K+++K T
Sbjct: 192 YYKIAKLVSEKRDDREKLTNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKT 250
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI D+ +R+IV+N ++CY AL + H+ + + K KDYI PK N Y
Sbjct: 251 IDEIFDLIAIRVIVDNIKNCYIALGLAHEKYNPISNKFKDYIAMPKSNNY 300
>gi|260434691|ref|ZP_05788661.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Synechococcus sp. WH 8109]
gi|260412565|gb|EEX05861.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Synechococcus sp. WH 8109]
Length = 777
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 178/295 (60%), Gaps = 17/295 (5%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E ++ AF + H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 66 EALLVSAFDFGFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTD 125
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ D I FG+ V +LVEGV+KL + R +A+ L MFLAMA + R V
Sbjct: 126 VTPDQIELHFGSEVRELVEGVTKLGGIHFNDR------TEAQAENLRRMFLAMASNIRVV 179
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 180 LVKLADRLHNMRTLGALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPE 239
Query: 409 Q----HTELSSKLVECFDEAMVTSAI--EKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
E+++K E VT + E+LE+A + + GR K L+ I KM
Sbjct: 240 AFREIQEEVATKRSEREQRLGVTVGLLNERLERA----GLEHCEVSGRPKHLFGIWSKMQ 295
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ EI+D+ LR++ N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 296 RQQKEFHEIYDVAALRILTPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|191638527|ref|YP_001987693.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|385820236|ref|YP_005856623.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|385823433|ref|YP_005859775.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|418005247|ref|ZP_12645243.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
gi|190712829|emb|CAQ66835.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|327382563|gb|AEA54039.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|327385760|gb|AEA57234.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|410547500|gb|EKQ21733.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
Length = 742
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 308
>gi|366085882|ref|ZP_09452367.1| GTP pyrophosphokinase [Lactobacillus zeae KCTC 3804]
Length = 741
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 182/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A + M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 308
>gi|116495022|ref|YP_806756.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
gi|116105172|gb|ABJ70314.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
Length = 742
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 308
>gi|417962567|ref|ZP_12604748.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-3]
gi|380336322|gb|EIA26345.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-3]
Length = 721
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 DSIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y I TFG VA LVEGVSKL +++ +E +A + M +AM D R +L
Sbjct: 78 TYSDIATTFGEEVAILVEGVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVIL 131
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEHKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +++ + E D E + I + ++ L + N++ ++ GR K LYSI+ K+++K T
Sbjct: 192 YYKIAKLVSEKRDDREKLTNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKT 250
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI D+ +R+IV+N ++CY AL + H+ + + K KDYI PK N Y
Sbjct: 251 IDEIFDLIAIRVIVDNIKNCYIALGLAHEKYNPISNKFKDYIAMPKSNNY 300
>gi|227534968|ref|ZP_03965017.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239631387|ref|ZP_04674418.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066581|ref|YP_003788604.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|417980818|ref|ZP_12621497.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|417986894|ref|ZP_12627458.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|417999269|ref|ZP_12639480.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|418002217|ref|ZP_12642339.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|418008131|ref|ZP_12648000.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|418010975|ref|ZP_12650746.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
gi|227187425|gb|EEI67492.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239525852|gb|EEQ64853.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438988|gb|ADK18754.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|410524265|gb|EKP99178.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|410524329|gb|EKP99241.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|410539545|gb|EKQ14073.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|410544645|gb|EKQ18966.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|410547359|gb|EKQ21594.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|410553554|gb|EKQ27557.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
Length = 742
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 308
>gi|359461025|ref|ZP_09249588.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris sp. CCMEE 5410]
Length = 732
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 184/301 (61%), Gaps = 11/301 (3%)
Query: 221 AQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGL 280
A+ K I + + +AF + H GQ RASG+PY+ H V A LL +G ++ ++AAG
Sbjct: 7 AEDKDGIAEQTLICRAFNFGYQLHEGQRRASGEPYIAHPVSVAELLRDLGGSAAMIAAGF 66
Query: 281 LHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMF 339
LHD ++D ++ + I FG V LVEGV+KLS+ N ++KT EA+ MF
Sbjct: 67 LHDVVEDTDVTPETIEAEFGLEVRQLVEGVTKLSKF-------NFSTKTEREAENFRRMF 119
Query: 340 LAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 398
LAMA D R +++KLADRLHNM TL+ LP K++R A+ET ++F PLANRLGI +K +LE
Sbjct: 120 LAMAQDIRVIVVKLADRLHNMRTLEHLPPAKQRRIAQETRDVFAPLANRLGIWRFKWELE 179
Query: 399 NLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 456
+L FK+L PD + ++ + + E + AI L L+ + L + GR K L+S
Sbjct: 180 DLAFKYLEPDTYRKMQQLVADKRTDREEHIEQAITILHDRLEPICSNHLEISGRPKHLFS 239
Query: 457 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 516
I KM +++ EI+D+ +R+IV+ E+CY+AL VVH + +PG+ KDYI PK N
Sbjct: 240 ISQKMERQQKEFHEIYDVAAVRVIVKTNEECYRALAVVHDCFRPIPGRFKDYIGLPKSNR 299
Query: 517 Y 517
Y
Sbjct: 300 Y 300
>gi|222529929|ref|YP_002573811.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
gi|222456776|gb|ACM61038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
Length = 726
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 186/293 (63%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KAF A++ H GQ R SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKHHDGQSRNSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 346
S + + R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 86 SLEDVEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 136
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N Y
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMY 309
>gi|410696071|gb|AFV75139.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus oshimai JL-2]
Length = 732
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 191/303 (63%), Gaps = 24/303 (7%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
A+ AE AH GQ R SG+PY+ H V A +LA++ ++ V AGLLHD ++D ++ + +
Sbjct: 35 AYRFAEAAHAGQRRRSGEPYITHPVAVAEILASLRMDAETVMAGLLHDVVEDCGVAPEEL 94
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
R FGAGV +VEG +K+S+L K+A N + A+ L MF+AMA D R +++KLAD
Sbjct: 95 ERRFGAGVRRIVEGETKVSKLYKMA---NLEGEERRAEDLRQMFIAMAEDVRIIIVKLAD 151
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ + L
Sbjct: 152 RLHNLRTLEHMPPEKQRRIAQETLEIYAPLAHRLGMGQIKWELEDLSFRYLHPEAYQSLL 211
Query: 415 SKLVECFD--EAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKKKLT 467
+L E + E +V A+ +L++AL KD+ I + GR K LYSI KM ++
Sbjct: 212 ERLKEGQEAREKLVERAMARLKEALEKDELLQAQIQGFEVTGRPKHLYSIWKKMEREGKA 271
Query: 468 MDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKF 514
+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI PK
Sbjct: 272 LEQIYDLLAVRVILDPKPSATEEARSLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKP 331
Query: 515 NGY 517
NGY
Sbjct: 332 NGY 334
>gi|282899912|ref|ZP_06307873.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Cylindrospermopsis raciborskii CS-505]
gi|281195182|gb|EFA70118.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Cylindrospermopsis raciborskii CS-505]
Length = 756
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 176/290 (60%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + A A H GQ R SG+PY+ H + A LL +G ++T++AAG LHD ++D +
Sbjct: 41 NLICSALKFAYELHEGQYRKSGEPYIAHPIAVADLLRDLGCSATMIAAGFLHDVVEDTEV 100
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I + FG V LVEGV+KLS++ N T+ +A+ MFL+MA D R ++
Sbjct: 101 TIEDIEQKFGHEVRQLVEGVTKLSKI------NFTSKTESQAENFRRMFLSMAQDIRVIV 154
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L PD
Sbjct: 155 VKLADRLHNMRTLQYMSETSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPDA 214
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ + E E + A E L + ++ I L + GR K LYSI+ KM +++
Sbjct: 215 YREIQEHVAEKRTAREEKLNKAKEVLRERIEQAGIKCLDISGRPKHLYSIYQKMQRQQKE 274
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IVE E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 275 FHEIYDLAALRIIVETNEECYRALAVVHDAFCPIPGRFKDYIGLPKPNRY 324
>gi|297206072|ref|ZP_06923467.1| GTP diphosphokinase [Lactobacillus jensenii JV-V16]
gi|297149198|gb|EFH29496.1| GTP diphosphokinase [Lactobacillus jensenii JV-V16]
Length = 744
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 177/291 (60%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV +A+ A++AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVERAYEYADKAHSGQKRASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I R FG VA +V+GV+KL++ + E A+ M +AMA D R +++
Sbjct: 87 NDDIKREFGEDVAFIVDGVTKLNKYEYKSHEE------FLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K +R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ +
Sbjct: 141 KLADRLHNMHTLDHLRPDKHRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAY 200
Query: 411 ----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+++SK E E + +AI L+ L +I + + GR K +YSI+ KM+ K
Sbjct: 201 YNIVNQMNSKRSER--EGYIETAIAYLKDTLDSLHIKYDIY-GRPKHIYSIYKKMVNKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 258 DFSEIFDLLAVRVIVQNVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGY 308
>gi|440680395|ref|YP_007155190.1| (p)ppGpp synthetase I, SpoT/RelA [Anabaena cylindrica PCC 7122]
gi|428677514|gb|AFZ56280.1| (p)ppGpp synthetase I, SpoT/RelA [Anabaena cylindrica PCC 7122]
Length = 758
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 175/290 (60%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H+GQ R SG+ Y+ H V A LL +G + ++AAG LHD ++D +
Sbjct: 42 DLICRAFKYAYQLHQGQYRKSGEAYIAHPVAVASLLRDLGGSPAMIAAGFLHDVVEDTEV 101
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I FGA V LVEGV+KLS++ N T+ +A+ MFLAMA D R ++
Sbjct: 102 TIEQIEELFGAEVRLLVEGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIV 155
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L PD
Sbjct: 156 VKLADRLHNMRTLQYMSEASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPDA 215
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
E+ + E E + + L + L+ I L + GR K LYSI+ KM +++
Sbjct: 216 FREIQQHVSEKRTAREEKLLKTTDVLRERLQQAGIQCLDISGRPKHLYSIYQKMHRQQKE 275
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 276 FHEIYDLAALRIIVQTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 325
>gi|422344010|ref|ZP_16424937.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
gi|355377758|gb|EHG24967.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
Length = 743
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 182/288 (63%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+ KA+ AE+AHRGQ+R SGD Y++H + A +L + + + A LLHD ++D +
Sbjct: 30 IKKAYSFAEQAHRGQVRISGDAYIMHPLNVAYILTGLHLDDETICAALLHDVVEDTHATL 89
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + FG + L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IK
Sbjct: 90 EEMEAEFGRNIMALIDGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIK 143
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL + KR+R AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ +
Sbjct: 144 LADRLHNMRTLKYMREDKRRRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYY 203
Query: 412 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L ++ E + +I+K+ + L+ +I + GR K YSI+ KM + +++
Sbjct: 204 ALVEEVKHKRQERQEFILDSIQKIHEKLEAADIKAEI-KGRAKHFYSIYRKMKRDNKSVN 262
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 263 EIYDLSAVRILVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|304436591|ref|ZP_07396560.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370287|gb|EFM23943.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 739
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+I+A+ A AHRGQ R SG+PY++H + A +L + + + A LHD ++D +
Sbjct: 29 IIRAYEFAANAHRGQERVSGEPYIVHPMHVAYILTTLHLDDETICAAFLHDVVEDTQTTL 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I FG V L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IK
Sbjct: 89 EEIEAVFGKNVMTLIDGVTKLGRIESMSKED------VKLENYRKMFLAMAKDIRVIMIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL + KRQR A+ETLE++ PLANRLGIS K +LE+LC ++L P+ +
Sbjct: 143 LADRLHNMRTLKYMREDKRQRIARETLEVYAPLANRLGISGIKAELEDLCLRYLEPEAYY 202
Query: 412 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L ++ + E + A++K+ L+ I + GR K YSI+ KM + +++
Sbjct: 203 TLVEEVKQKRRERQEFIQDAVQKIRAQLETAGIEAEI-KGRAKHFYSIYRKMKRDNKSIN 261
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++V +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 262 EIYDLSAVRVLVSTVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 309
>gi|291278481|ref|YP_003495316.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
gi|290753183|dbj|BAI79560.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
Length = 710
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 179/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A HRGQ+R SG+PYL H + A +LA + + V AGLLHDTL+D +Y+
Sbjct: 30 KAYVYAATKHRGQLRKSGEPYLSHPLNVAYILAEMNMDLDTVVAGLLHDTLEDTDATYEE 89
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GVSK+ ++ N + + +A+ M ++M+ D R ++IKLA
Sbjct: 90 LVNLFGEDVAFLVDGVSKIGKI------NFKSHEEKQAEAFRKMLISMSKDIRVIVIKLA 143
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T++ LP K++R AKETLEI+ PLA+RLGI+ K +LE+L F+ LNP+ + ++
Sbjct: 144 DRLHNMRTINFLPEEKKKRIAKETLEIYAPLAHRLGIAWIKWELEDLSFRILNPEAYYDI 203
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ KL E + I +++ L+ + I V GR K YSI+ KM++KK + DEI
Sbjct: 204 YNKVKLKRSEREQYLKEVINIVKEVLEKEGIKAEV-TGRPKHFYSIYTKMIRKKTSFDEI 262
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ LR++V +CY L ++H LW + G++KDYI PK N Y
Sbjct: 263 YDLLALRVLVNTVGECYAVLGIIHNLWKPIQGRIKDYIAMPKSNMY 308
>gi|254414928|ref|ZP_05028692.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196178417|gb|EDX73417.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 751
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 130/290 (44%), Positives = 178/290 (61%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V++AF A + H Q RASG+PY+ H V A LL +G NST++AAGLLHD ++D ++
Sbjct: 39 LVVRAFEFAYQLHSEQYRASGEPYIAHPVAVAGLLRDLGGNSTMMAAGLLHDVVEDTDVT 98
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
D I FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 99 PDEIESIFGAEVRHLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 151
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ L K++ A+ET EIF PLANRLGI +K +LE+L FK+L P+
Sbjct: 152 VKLADRLHNMRTLEHLKPQKQRAIAQETREIFAPLANRLGIGRFKWELEDLSFKYLEPNA 211
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ + E E +T + L L + I + L R K LY I+ KM ++
Sbjct: 212 YRKIQELVAERRQDREERLTQVSQILRGRLDEMGIRCVDLNSRPKHLYGIYQKMQRRNKE 271
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IVE E CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 272 FHEIYDLAAMRIIVETNEGCYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 321
>gi|339629624|ref|YP_004721267.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|379007260|ref|YP_005256711.1| (p)ppGpp synthetase I SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
gi|339287413|gb|AEJ41524.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|361053522|gb|AEW05039.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
Length = 719
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 180/291 (61%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +I+A A+ AHRGQ RASG+PY+ H + A +LA + ++ + A LLHD ++D
Sbjct: 20 DQIIRAIEFADEAHRGQSRASGEPYIAHPLAVAGILADLKMDTPTIVAALLHDVVEDTAY 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ I FG VA LV+GV+KL +L +E +A+ L MFLAMA D R +L
Sbjct: 80 TLADIESRFGTEVAQLVDGVTKLDRLEVRTQEEE------QAENLRKMFLAMAKDIRVIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP + R AKET+EI+ PLA+RLGI K +LE+L F++L P
Sbjct: 134 IKLADRLHNMRTLKHLPQDRVTRIAKETMEIYAPLAHRLGIFRIKWELEDLAFQYLQPAA 193
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDK-NISFLV--LCGRHKSLYSIHCKMLKKKL 466
+ E+ + + E +A++ + Q LKD+ + S +V + GR K LYSI+ KM K+
Sbjct: 194 YQEMKELVAKKRQER--EAAVDAVIQELKDRLDASGMVSEVSGRAKHLYSIYQKMHKQGK 251
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ +R++VE+ +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 252 DFGQIYDLVAVRVLVESVKDCYAVLGLVHSLWKPVPGRFKDYIAMPKSNLY 302
>gi|229552374|ref|ZP_04441099.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
gi|229314276|gb|EEN80249.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
Length = 769
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 55 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNIT 114
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 115 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 168
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 169 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 228
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 229 YRIAHLMNSKRTE--REAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 285
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 286 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 336
>gi|347542568|ref|YP_004857205.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985604|dbj|BAK81279.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 719
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 ELIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y I TFG VA LVEGVSKL +++ +E +AD + M +AM D R +L
Sbjct: 78 TYSDISATFGEEVAILVEGVSKLDKINYKTKEE------AQADNIRKMLMAMTKDIRVIL 131
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEYKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ + E D E + I++ ++ L +++ V+ GR K LYSI+ K+++K T
Sbjct: 192 YYRIAKLVSEKRDDREKLTNEIIKEFKEVLNQSDVN-AVIEGRPKHLYSIYKKLIQKNKT 250
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI D+ +R+IV++ +DCY AL + H+ + + K KDYI PK N Y
Sbjct: 251 IDEIFDLIAIRVIVDSIKDCYVALGLAHEKYNPISNKFKDYIAMPKSNNY 300
>gi|406915627|gb|EKD54692.1| hypothetical protein ACD_60C00057G0017 [uncultured bacterium]
Length = 720
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 175/286 (61%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A++AH GQ R +G+PY+ H V A +LA + + + A +LHD ++D +
Sbjct: 25 EAYVLAKKAHEGQKRHTGEPYITHPVAVAQILATMRMDPPTIIAAILHDVIEDTSVEKPD 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VADLV+GV+KL+Q+ +R +A+ M +AMA D R +L+K+A
Sbjct: 85 LIEKFGKEVADLVDGVTKLTQMEFESRAQ------AQAENFRKMIMAMARDIRVILVKIA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+D LPL KR+R AKETLEIF P+ANRLG+ ++++ E+L F L P ++ L
Sbjct: 139 DRLHNMKTIDCLPLEKRRRIAKETLEIFAPIANRLGMHAFRIEFEDLGFSALYPMRYRIL 198
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + I+K + +LK NI L GR K +YSI+ KM +K L+ E+
Sbjct: 199 KSAVSKALGSRHEILELIDKEIRNSLKKTNIPIRFLTGREKHIYSIYKKMHEKHLSFSEV 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+YG R+IV+ + CY+ L V+H L+ + + KDYI PK NGY
Sbjct: 259 MDVYGFRVIVDKLDTCYRVLGVLHNLYKPLTQRFKDYIAIPKANGY 304
>gi|188588536|ref|YP_001920360.1| GTP pyrophosphokinase [Clostridium botulinum E3 str. Alaska E43]
gi|188498817|gb|ACD51953.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E3 str.
Alaska E43]
Length = 728
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 186/294 (63%), Gaps = 18/294 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+Y AE AH+ Q R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D
Sbjct: 19 EMIKKAYYFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTC 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SY+ + F +A+LV GV+KL ++ +E +AD + M LAMA D R ++
Sbjct: 79 SYESMKTIFNEEIANLVNGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D+
Sbjct: 133 IKLADRLHNMRTLKFMPKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDE 192
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ +L ++ E + +V EKL+++ D +I GR K YSI+ KM+
Sbjct: 193 YYQLVEQIAEKRVERETYINEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMIN 247
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 248 KNKSIEQIFDLTAIRILVNSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|10443847|gb|AAG17607.1|AF242653_1 ppGpp synthetase/hydrolase Rel [Geobacillus stearothermophilus ATCC
7953]
Length = 732
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 180/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ KA+ A+ AHR Q R SG+PY++H ++ A +L + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|56421113|ref|YP_148431.1| GTP pyrophosphokinase [Geobacillus kaustophilus HTA426]
gi|375009672|ref|YP_004983305.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380955|dbj|BAD76863.1| GTP pyrophosphokinase (ppGpp synthetase) [Geobacillus kaustophilus
HTA426]
gi|359288521|gb|AEV20205.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 732
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 180/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ KA+ A+ AHR Q R SG+PY++H ++ A +L + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|417961047|ref|ZP_12603537.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-2]
gi|380334505|gb|EIA24897.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-2]
Length = 638
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 DSIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y I TFG VA LVEGVSKL +++ +E +A + M +AM D R +L
Sbjct: 78 TYSDIATTFGEEVAILVEGVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVIL 131
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEHKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +++ + E D E + I + ++ L + N++ ++ GR K LYSI+ K+++K T
Sbjct: 192 YYKIAKLVSEKRDDREKLTNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKT 250
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI D+ +R+IV+N ++CY AL + H+ + + K KDYI PK N Y
Sbjct: 251 IDEIFDLIAIRVIVDNIKNCYIALGLAHEKYNPISNKFKDYIAMPKSNNY 300
>gi|423078898|ref|ZP_17067574.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
gi|357548801|gb|EHJ30660.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
Length = 760
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 46 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDKNIT 105
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 106 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 159
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 160 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 219
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 220 YRIAHLMNSKRTE--REAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 276
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 277 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 327
>gi|261418406|ref|YP_003252088.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297529258|ref|YP_003670533.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. C56-T3]
gi|319767635|ref|YP_004133136.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC52]
gi|448238857|ref|YP_007402915.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
gi|261374863|gb|ACX77606.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297252510|gb|ADI25956.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. C56-T3]
gi|317112501|gb|ADU94993.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC52]
gi|445207699|gb|AGE23164.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
Length = 732
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 180/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ KA+ A+ AHR Q R SG+PY++H ++ A +L + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|291561450|emb|CBL40249.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
SS3/4]
Length = 761
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 206/333 (61%), Gaps = 23/333 (6%)
Query: 201 MEDN---IVEGNLETYA---------KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQM 248
ME+N +EG+LE A ++ +A+ + H + KA+ A+ AH+ Q
Sbjct: 1 MEENKLKTIEGDLEAPADFTSPDVLYRDLVASIRKYHPSDDLSMIEKAYQLADNAHKDQK 60
Query: 249 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 308
R SG+PY++H + A++LA + + +AAGLLHD ++D + + + FG VA LV+
Sbjct: 61 RKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTVYTEEQLAELFGKEVALLVD 120
Query: 309 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 366
GV+KL+QLS +A K ++A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 121 GVTKLTQLSW------SADKVEMQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMR 174
Query: 367 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 424
K++ A+ET+EI+ PLA+RLGIS K++L++L ++L P+ + EL K+ + +
Sbjct: 175 PEKQKEKARETIEIYSPLADRLGISKIKIELDDLALRYLEPNVYKELEEKIALTSEARQK 234
Query: 425 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 484
+ I +++ +++ I V GR K +SI+ KML + T+D+I+DI+ +R+IV++
Sbjct: 235 FIDDIISEIKTHMENAEIRCEV-NGRVKHFFSIYKKMLNQHKTLDQIYDIFAVRIIVDSV 293
Query: 485 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 294 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMY 326
>gi|104773939|ref|YP_618919.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|103423020|emb|CAI97706.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
Length = 753
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A +LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYE------YKSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 308
>gi|418036575|ref|ZP_12674991.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354687625|gb|EHE87705.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 753
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A +LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYE------YKSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 308
>gi|199599338|ref|ZP_03212736.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|258508564|ref|YP_003171315.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385828226|ref|YP_005865998.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385835394|ref|YP_005873168.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|421768716|ref|ZP_16205426.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|421771132|ref|ZP_16207793.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
gi|199589777|gb|EDY97885.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|257148491|emb|CAR87464.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|259649871|dbj|BAI42033.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|355394885|gb|AER64315.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|411185565|gb|EKS52692.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|411186567|gb|EKS53691.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
Length = 741
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 308
>gi|425454881|ref|ZP_18834606.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9807]
gi|389804320|emb|CCI16779.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9807]
Length = 765
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 179/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAYKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEDRFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L ++QR + ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRISLETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ EA + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--REARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N Y
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRY 331
>gi|428212424|ref|YP_007085568.1| RelA/SpoT family (p)ppGpp synthetase [Oscillatoria acuminata PCC
6304]
gi|428000805|gb|AFY81648.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoria acuminata PCC
6304]
Length = 754
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 176/290 (60%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H Q R SG+PY++H + A LL +G +S ++AAG LHD ++D ++
Sbjct: 45 LICRAFEFAYQLHECQRRKSGEPYIIHPIAVAGLLRELGGSSAMIAAGFLHDVVEDTEVT 104
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
D I FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 105 PDEIQERFGEEVRQLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 157
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL++L KRQR A ET EIF PLANRLGI +K +LE+L FK+L PD
Sbjct: 158 VKLADRLHNMRTLESLADVKRQRIALETREIFAPLANRLGIGRFKWELEDLSFKYLEPDS 217
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ + E E + E L L++ I + GR K LY I+ KM ++
Sbjct: 218 YRQMQDLVAEKRIDRENRLNKVTETLRLRLEELGIGCTEVSGRPKHLYGIYQKMQRQNKK 277
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V+ E+CY+AL + H + +PG+ KDYI PK N Y
Sbjct: 278 FEEIYDVAAVRILVQKSEECYRALAIAHDAFRPLPGRFKDYIGLPKPNRY 327
>gi|153810165|ref|ZP_01962833.1| hypothetical protein RUMOBE_00546 [Ruminococcus obeum ATCC 29174]
gi|149833344|gb|EDM88425.1| RelA/SpoT family protein [Ruminococcus obeum ATCC 29174]
Length = 776
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 197/311 (63%), Gaps = 11/311 (3%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E +E +A+ + H + KA+ A AH+ Q R SG+PY++H + A++LA +
Sbjct: 42 EVLYEELIASVKKYHPSTDISMIQKAYEVAREAHKDQKRKSGEPYIIHPLCVAIILADLE 101
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT- 329
+ + AGLLHD ++D +++ + + + F A VA LV+GV+KL QLS +A K
Sbjct: 102 LDKETIVAGLLHDAVEDTWMTIEEVEKEFSAEVALLVDGVTKLGQLS------YSADKVE 155
Query: 330 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 388
++A+ L MFLAMA D R +LIKLADRLHNM TL + K+Q A+ET++I+ P+A RL
Sbjct: 156 LQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIAMRL 215
Query: 389 GISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLV 446
GIS KV+L++L K+L PD + +L K L + + V + +++++Q + + +I V
Sbjct: 216 GISKIKVELDDLSLKYLKPDVYYDLVDKVALRKSERQEFVNNIVKQVKQHMDEASIKAQV 275
Query: 447 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 506
GR K +SI+ KM+ + T+D+I+D++ +R++V+ +DCY AL V+H+++ +PG+ K
Sbjct: 276 -DGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRILVDTVKDCYAALGVIHEMYKPIPGRFK 334
Query: 507 DYITRPKFNGY 517
DYI PK N Y
Sbjct: 335 DYIAMPKPNMY 345
>gi|254432294|ref|ZP_05045997.1| RelA/SpoT family protein [Cyanobium sp. PCC 7001]
gi|197626747|gb|EDY39306.1| RelA/SpoT family protein [Cyanobium sp. PCC 7001]
Length = 826
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 177/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + AF A + H GQ RASG+PY++H V A LL IGA+++V+AAG LHD ++D
Sbjct: 110 EALLASAFDFAYQLHEGQYRASGEPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTE 169
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ D + + FGA V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 170 VTPDELEQHFGAEVRALVEGVTKLGGI------HFTNKTEAQAENLRRMFLAMASDIRVV 223
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL AL K+ R A+ET EI+ PLANRLGI K +LE+L FK L P+
Sbjct: 224 LVKLADRLHNMRTLAALKPEKQLRIARETREIYAPLANRLGIGRLKWELEDLAFKILEPE 283
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ ++ C E + ++ L + L +S + GR K LY I KM +++
Sbjct: 284 AYRDVQQQVATKRCEREERLGVTVQLLRERLAAVGLSACEVSGRPKHLYGIWSKMQRQQK 343
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+I + + CY++L VVH + +PG+ KDYI PK NGY
Sbjct: 344 AFHEIYDVAALRIICPSLDGCYRSLAVVHDTFRPIPGRFKDYIGLPKPNGY 394
>gi|385815572|ref|YP_005851963.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|325125609|gb|ADY84939.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
Length = 738
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H ++ A LA +G + VAAG LHDT++D ++
Sbjct: 12 FVESAYQFAARAHEGQTRASGQPYIVHPIQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 71
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 72 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 125
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 126 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP--- 182
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 183 -EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 240
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 241 HKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 293
>gi|403744544|ref|ZP_10953770.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122078|gb|EJY56326.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 725
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V +A+ A RAH GQ+R SG+PY+ H + A +LA + ++T V A LLHD ++D +
Sbjct: 27 DEVRQAYEFASRAHAGQVRMSGEPYITHPLAVAYILADLQLDATAVVAALLHDVVEDTSV 86
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ I +TFGA VA LV+GV+KL ++ +RE +A+ L MF+AMA D R ++
Sbjct: 87 TDSNIVQTFGAEVASLVDGVTKLKRIRFDSREEQ------QAENLRKMFMAMARDIRVLI 140
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + R A+ETLEIF PLA+RLGI+T K +LE++ ++LNP Q
Sbjct: 141 IKLADRLHNMRTLRYQTPATQMRKARETLEIFAPLAHRLGINTIKWELEDISLRYLNPQQ 200
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + + E + ++ L Q L + N+ V GR K +YSI+ KM +
Sbjct: 201 YYRIVNLMARKRQEREQFIEGVMDVLRQKLGELNLKAEV-SGRAKHIYSIYRKMTTQHKE 259
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D++ +R+ VE+ +DCY L VVH +W +PG+ KDYI PK N Y
Sbjct: 260 FNEIYDLFAIRVTVESIKDCYGVLGVVHTMWKPMPGRFKDYIAMPKANMY 309
>gi|18310920|ref|NP_562854.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
gi|18145602|dbj|BAB81644.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
Length = 726
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 184/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E E ++ I++L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|258512062|ref|YP_003185496.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478788|gb|ACV59107.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 725
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 181/288 (62%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A +AH+GQMR SG+PY+ H + A +LA + ++ + AGLLHD ++D +S
Sbjct: 29 VRRAYEFAAKAHQGQMRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSD 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I + FGA VA LV+GV+KL ++ +RE +A+ L MF+AMA D R ++IK
Sbjct: 89 SAIVQAFGAEVATLVDGVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL + R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+
Sbjct: 143 LADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYY 202
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+ + + E + I L + L + N+ V GR K +YSI+ KM+ + +
Sbjct: 203 RIVNLMARKRQEREQYIEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFN 261
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D++ +R+IVE+ +DCY AL VVH +W +PG+ KDYI PK N Y
Sbjct: 262 EIYDLFAIRIIVESIKDCYGALGVVHTMWKPMPGRFKDYIAMPKANMY 309
>gi|126700359|ref|YP_001089256.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|254976339|ref|ZP_05272811.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-66c26]
gi|255093724|ref|ZP_05323202.1| putative GTP pyrophosphokinase [Clostridium difficile CIP 107932]
gi|255101915|ref|ZP_05330892.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-63q42]
gi|255307784|ref|ZP_05351955.1| putative GTP pyrophosphokinase [Clostridium difficile ATCC 43255]
gi|255315476|ref|ZP_05357059.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-76w55]
gi|255518139|ref|ZP_05385815.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-97b34]
gi|255651255|ref|ZP_05398157.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-37x79]
gi|260684319|ref|YP_003215604.1| GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260687978|ref|YP_003219112.1| GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296452442|ref|ZP_06894143.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296877791|ref|ZP_06901817.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|306521098|ref|ZP_07407445.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-32g58]
gi|384361963|ref|YP_006199815.1| GTP pyrophosphokinase [Clostridium difficile BI1]
gi|423081063|ref|ZP_17069675.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|423085064|ref|ZP_17073522.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|423089842|ref|ZP_17078191.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
gi|115251796|emb|CAJ69631.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|260210482|emb|CBA64959.1| putative GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260213995|emb|CBE06110.1| putative GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296258772|gb|EFH05666.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296431242|gb|EFH17063.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|357550919|gb|EHJ32724.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|357551372|gb|EHJ33162.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|357557606|gb|EHJ39140.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
Length = 735
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 178/291 (61%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A++AH GQ R SG+PY +H + A +L + + + AGLLHD ++D
Sbjct: 23 EMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEY 82
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I + FG VADLV+GV+KL Q+ ++E +++ L MFLAMA D R +L
Sbjct: 83 TYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEE------TQSENLRKMFLAMAKDIRVIL 136
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K + AKETLEI+ +A+RLGIS K +LE+ + ++P+
Sbjct: 137 IKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEG 196
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLC---GRHKSLYSIHCKMLKKKL 466
+ +L S++ + I+ + + LKDK + C GR K YSI+ KM KK
Sbjct: 197 YYDLVSRV--SMKRSQREDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHK 254
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R++V+N +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 255 TFEEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMY 305
>gi|134295029|ref|YP_001118764.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia vietnamiensis G4]
gi|387901650|ref|YP_006331989.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia sp. KJ006]
gi|134138186|gb|ABO53929.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia vietnamiensis G4]
gi|387576542|gb|AFJ85258.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia sp. KJ006]
Length = 788
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 185/313 (59%), Gaps = 17/313 (5%)
Query: 208 GNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 267
NL T E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A
Sbjct: 56 ANLTTALAEYLGPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICA 108
Query: 268 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 327
++ V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE
Sbjct: 109 GWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE---- 164
Query: 328 KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 386
+A+ M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+
Sbjct: 165 --AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAH 222
Query: 387 RLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISF 444
RLG++ +L+++ F + NP ++ L K +++ +E ++A+ D I
Sbjct: 223 RLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMTDAKIDA 282
Query: 445 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 504
+ GR K++YSI+ KM K+L+ ++ D+YG R++V+N DCY + +H L+ VPGK
Sbjct: 283 EI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDNPLDCYTCIGALHALYKPVPGK 341
Query: 505 MKDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 342 FKDYIAIPKINGY 354
>gi|258539745|ref|YP_003174244.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
gi|257151421|emb|CAR90393.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
Length = 741
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWKLEDLSLRYLNPQQY 200
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTE--REAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 308
>gi|418070749|ref|ZP_12708024.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
gi|357540169|gb|EHJ24186.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
Length = 741
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDKNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 411 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLY 308
>gi|312621838|ref|YP_004023451.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202305|gb|ADQ45632.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 726
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 185/293 (63%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KAF A++ H GQ R SG+PY+LH +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKHHDGQSRNSGEPYILHPLEVALILADLELDIPSIVAGLLHDVVEDTSA 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 346
S + + R FG +A+LV+GV+KL +L SKL R+ + M +AMA D R
Sbjct: 86 SLEDVEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------VENYRKMLIAMAKDIR 136
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N Y
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMY 309
>gi|72162489|ref|YP_290146.1| RelA/SpoT protein [Thermobifida fusca YX]
gi|71916221|gb|AAZ56123.1| RelA/SpoT protein [Thermobifida fusca YX]
Length = 814
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 175/289 (60%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ A HR Q R SGDPY+ H + A +LA +G +AAGLLHDT++D +
Sbjct: 115 LIERAYDVAAHYHRSQKRKSGDPYITHPLAVATILAELGMQEATIAAGLLHDTVEDTEYT 174
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG +A+LV+GV+KL ++ + +A+ + M +AMA D R ++I
Sbjct: 175 LDQLRSDFGDEIAELVDGVTKLDKVK--------YGEATQAETVRKMVVAMARDIRVLVI 226
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KL DRLHNM TL LP KR++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 227 KLCDRLHNMRTLRYLPQAKREKKARETLEIYAPLAHRLGMNTIKWELEDLAFATLYPKRF 286
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E++ + E + + IE + L++ I V GR K YSI+ KM+ + +
Sbjct: 287 DEIARLVAERAPRRDVYLQEVIEIVSADLREAKIKATVR-GRPKHYYSIYQKMIARNVGF 345
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ G+R+IV++ DCY AL ++H W VPG+ KDYI PKFN Y
Sbjct: 346 DEIYDLVGIRVIVDSVRDCYAALGIIHARWNPVPGRFKDYIAMPKFNMY 394
>gi|114566344|ref|YP_753498.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337279|gb|ABI68127.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 734
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 185/289 (64%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KAF AE+AH+ Q R SG+PY++H E A++LA I ++ + A LLHD ++D +S
Sbjct: 21 LIEKAFRVAEQAHQEQKRISGEPYIIHPCEVALILADIEMDTPTICAALLHDVIEDTPVS 80
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y I + FG +A LV+GV+KL+++ +RE+ +A+ L MF+AMA D R ++I
Sbjct: 81 YLDILKEFGEEIALLVDGVTKLTRIDFKSRED------AQAENLRRMFIAMARDIRVIII 134
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL K++ A+ET+EIF PLA+RLGI +K +LE+L F ++ P+ +
Sbjct: 135 KLADRLHNMRTLSYHAEAKQKVIARETMEIFAPLAHRLGIFRFKWELEDLAFYYMEPEMY 194
Query: 411 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E++ +L + E V +E+++ L +I + GR K+++SI+ KM+K+ +
Sbjct: 195 YEVAKRLKQKRRERENYVNDLVEQIKVGLHQIDIDADI-KGRPKNIFSIYKKMIKQGKDV 253
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D +R++VE+ DCY L ++H +W +PG+ KDYI PK N Y
Sbjct: 254 DEIYDKIAIRVLVEDVRDCYGVLGIIHTMWKPLPGRFKDYIATPKANMY 302
>gi|354616924|ref|ZP_09034463.1| (p)ppGpp synthetase I, SpoT/RelA [Saccharomonospora paurometabolica
YIM 90007]
gi|353218722|gb|EHB83422.1| (p)ppGpp synthetase I, SpoT/RelA [Saccharomonospora paurometabolica
YIM 90007]
Length = 778
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 183/291 (62%), Gaps = 22/291 (7%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 77 RAYDVAEERHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLEQ 136
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V+ LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 137 LGEDFGEKVSQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 188
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 189 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 248
Query: 414 SSKLV-------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+LV + + ++ ++LE++ D + GR K YSIH KM+ ++
Sbjct: 249 V-RLVADRAPSRDTYLRWVIGELTKQLEESRVDAKVE-----GRPKHYYSIHQKMIVRER 302
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+IHD+ G+R++VE+ DCY A+ VVH LW +PG+ KDY+ +P+F Y
Sbjct: 303 ELDDIHDLVGVRILVEDVRDCYAAMGVVHALWQPMPGRFKDYVAQPRFGVY 353
>gi|427418396|ref|ZP_18908579.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
gi|425761109|gb|EKV01962.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
Length = 763
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 179/292 (61%), Gaps = 15/292 (5%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V +AF A + H+GQMRASG+PY+ H V A +L ++G +S ++AAG LHD ++D +S
Sbjct: 48 LVCRAFEFAYQLHKGQMRASGEPYIAHPVAVANILRSLGGDSAMIAAGFLHDVVEDTDVS 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARA 347
D I FGA V +VEGV+KLS+ SK R +A+ MFLAMA D R
Sbjct: 108 ADEIEAHFGAEVRQMVEGVTKLSKFQFNSKTER---------QAENFRRMFLAMAQDIRV 158
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+++KLADRLHNM TL LP K+ + A ET+EIF PLANRLGI K +LE+L FK+L
Sbjct: 159 IVVKLADRLHNMRTLQHLPPEKQVQKACETIEIFAPLANRLGIGRMKWELEDLSFKYLEE 218
Query: 408 DQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ E+ + + E EA + E LE L + I+ + + R K LYSI+ KM ++K
Sbjct: 219 SSYQEIKNLISEKRVDREARLKQVAELLETHLTNDGINCVEISSRPKHLYSIYRKMQRQK 278
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+DI +R+IV + +CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 279 KDFHQIYDIAAVRIIVSTKVECYRALAVVHDQFKPIPGRFKDYIGLPKANRY 330
>gi|294101598|ref|YP_003553456.1| (p)ppGpp synthetase I SpoT/RelA [Aminobacterium colombiense DSM
12261]
gi|293616578|gb|ADE56732.1| (p)ppGpp synthetase I, SpoT/RelA [Aminobacterium colombiense DSM
12261]
Length = 734
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 178/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A AH Q R+SGDPY++H + A +LA + + + A LLHD L+D LS +
Sbjct: 43 EAFVMAADAHGEQKRSSGDPYVVHSINVASILADMQLDLVTLIAALLHDVLEDTALSAEK 102
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V LV+GV+KL +L + E+ +A+ L MF+ MA D R VLIKLA
Sbjct: 103 VKSAFGDDVITLVDGVTKLGKLPFKSFED------YQAENLRKMFVVMAKDIRVVLIKLA 156
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL AL K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +PD + E+
Sbjct: 157 DRLHNMRTLGALRRDKQLRIAKETLEIYAPLAHRLGIYQVKRGLEDLAFKYSDPDMYYEI 216
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + EA++ AIE L+ LK ++I F V GR K YSI+ KM +KKL ++++
Sbjct: 217 RRRVRKKLPEREAIIKKAIEILQDRLKQESIHFKV-KGRAKHFYSIYEKMNRKKLPVEQL 275
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ LR++V++ CY L +VH +W +PG+ DYI PK N Y
Sbjct: 276 YDLLALRVVVDDVAACYTVLGIVHTIWKPIPGQFDDYIANPKTNMY 321
>gi|385676940|ref|ZP_10050868.1| GTP pyrophosphokinase [Amycolatopsis sp. ATCC 39116]
Length = 776
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 180/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 76 RAYDVAEELHRHQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 135
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 136 LTADFGDKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 187
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQVRKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 247
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I++L AL I+ V GR K YSIH KM+ + +D+I
Sbjct: 248 VRLVADRAPSRDIYLRKVIDELTGALGGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 306
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE+ DCY A+ VVH LW +PG+ KDYI +P+F Y
Sbjct: 307 HDLVGVRILVEDVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVY 352
>gi|169343681|ref|ZP_02864680.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
gi|169298241|gb|EDS80331.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
Length = 726
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 184/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E E ++ I++L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|451336886|ref|ZP_21907438.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Amycolatopsis azurea
DSM 43854]
gi|449420535|gb|EMD26011.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Amycolatopsis azurea
DSM 43854]
Length = 776
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 180/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 76 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLES 135
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V +LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 136 LKADFGEKVGELVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 187
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 247
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + S I +L L+ I+ V GR K YSIH KM+ + +D+I
Sbjct: 248 VRLVADRAPSRDTYLRSVITELTGNLEGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 306
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE+ DCY A+ VVH LW VPG+ KDYI +P+F Y
Sbjct: 307 HDLVGVRILVEDVRDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVY 352
>gi|110802270|ref|YP_699214.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
gi|110682771|gb|ABG86141.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
Length = 726
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 184/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E E ++ I++L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|167586479|ref|ZP_02378867.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ubonensis Bu]
Length = 795
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 183/305 (60%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+LA ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 71 EYLAPEEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 123
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 124 VMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 177
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 178 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 237
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 238 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 296
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YSI+ KM K+L+ ++ D+YG R++VEN DCY + +H L+ VPGK KDYI P
Sbjct: 297 TIYSIYRKMRDKQLSFSQVLDVYGFRVVVENPLDCYTCIGALHALYKPVPGKFKDYIAIP 356
Query: 513 KFNGY 517
K NGY
Sbjct: 357 KINGY 361
>gi|406898727|gb|EKD42212.1| hypothetical protein ACD_73C00262G0001, partial [uncultured
bacterium]
Length = 322
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 181/291 (62%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ +AH GQMR SGDPYL+H +E A +LA + + + +AAG+LHDTL+D
Sbjct: 21 DLINKAYVFTAKAHAGQMRKSGDPYLIHPLEVAHILADMKLDVSSIAAGMLHDTLEDTQT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ I FGA +A+LV+GV+K+S+ +E + +A+ M +AM+ D R +L
Sbjct: 81 TKKDIQDLFGADIAELVDGVTKISKFKFNTQEEH------QAENFRKMIMAMSRDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HN+ TL +P K+ A+ETL+I+ PLA+RLGI K+QLE+L F+ L PD
Sbjct: 135 IKLADRFHNLSTLQFMPEEKQMSIAQETLDIYSPLASRLGIDWLKLQLEDLSFRFLKPDV 194
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDK---NISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ ++V + + ++E+A+ + +I V+ GR K Y I+ KM + +
Sbjct: 195 YRQIQKQMVRL--KKNREEYMARVEKAVSEHFTSSIPHFVIAGRLKHAYGIYRKMQRLNI 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++HD+ R+I N E+CY+AL ++H +W VPG+ KDY+ PK N Y
Sbjct: 253 SFEQVHDLLAFRIITNNIEECYEALGLLHSMWKPVPGRFKDYVAMPKANNY 303
>gi|238925277|ref|YP_002938794.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
gi|238876953|gb|ACR76660.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
Length = 786
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 181/294 (61%), Gaps = 9/294 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A AH+GQ R SG+PY++H + A++LA + + +AAGLLHD L+D ++
Sbjct: 57 LVDKAYRVAYDAHKGQARKSGEPYIIHPLCVAIILAELELDKETIAAGLLHDVLEDTIMT 116
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQL-----SKLARENNTASKTVEADRLHTMFLAMA-DA 345
D + FG VA LV+GV+KL L +K ++ N ++A+ L MFLAMA D
Sbjct: 117 MDEMRAEFGDDVAHLVDGVTKLKHLHLTDSTKDPKDKNADRLEMQAENLRKMFLAMAKDI 176
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R +LIKLADRLHNM TL +QR A+ET +I+ P+A RLGIS K++LE+LC K+L
Sbjct: 177 RVILIKLADRLHNMRTLKYQSKEAQQRIARETQDIYCPIAQRLGISKIKIELEDLCMKYL 236
Query: 406 NPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
PD + +L K L + + + + +++ + D I + GR K +SI+ KM+
Sbjct: 237 YPDAYYDLVEKVALRKTERDTYIQGLVNDVKKYVSDAGIKAEIY-GRAKHFFSIYKKMVN 295
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ T+D+I+D++ +R++V+ DCY L ++H+ + +PG+ KDYI PK N Y
Sbjct: 296 QDKTIDQIYDLFAIRILVDTIPDCYAVLGIIHEKYKPIPGRFKDYIAMPKQNMY 349
>gi|442555432|ref|YP_007365257.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
gi|441492879|gb|AGC49573.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
Length = 733
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 181/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A AH GQ+R SG+PYL H + A +L+ +G ++ + A LLHDT++D S
Sbjct: 34 LVQKAYVYAAAAHEGQLRLSGEPYLSHPLAVAEMLSEMGFDAYAIMAALLHDTVEDTKCS 93
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FG VAD+V GV+K+S +S ++E +A+ M LAM+ D R ++
Sbjct: 94 LEDIETEFGKQVADIVNGVTKISMMSFESKEEQ------QAENFRKMILAMSQDIRVPIV 147
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ KRQ A+ET++I+ PLANRLG+ K++LE+L FK+L+PD +
Sbjct: 148 KLADRLHNMRTLNFQKPHKRQSIAQETMDIYAPLANRLGLHRIKLELEDLSFKYLHPDIY 207
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
T++S+ + + ++ I K+ +A+ KN + GR K +YSIH KM+++ LT+
Sbjct: 208 TQISTWMHSNRVVERNLIERIISKI-KAILHKNGLKGTVQGRVKHVYSIHKKMVEQHLTL 266
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D +HDI R+IV+ DCY L ++H W + G+ KDYI+ PK NGY
Sbjct: 267 DSMHDILAFRVIVDTISDCYAVLGLLHSQWKPLHGRFKDYISMPKVNGY 315
>gi|124024494|ref|YP_001018801.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. MIT 9303]
gi|123964780|gb|ABM79536.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9303]
Length = 753
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 169/277 (61%), Gaps = 9/277 (3%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D L+ + + FGA V
Sbjct: 57 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDLTPEQLEDYFGAEV 116
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
+LVEGV+KL + N T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 117 RELVEGVTKLGGI------NFTNHTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 170
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 420
+L K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++
Sbjct: 171 GSLQADKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVATKRS 230
Query: 421 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 480
E + + +E L + L + + GR K LY I KM +++ EI D+ LR+I
Sbjct: 231 ERENRLATTVELLTERLAAAGLDACEVSGRPKHLYGIWSKMQRQQKAFHEIFDVAALRII 290
Query: 481 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ E CY+AL VVH + +PG+ KDYI K NGY
Sbjct: 291 APSVETCYRALAVVHDTFRPIPGRFKDYIGLAKPNGY 327
>gi|452946137|gb|EME51637.1| GTP pyrophosphokinase [Amycolatopsis decaplanina DSM 44594]
Length = 776
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 180/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 76 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLES 135
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V +LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 136 LKADFGEKVGELVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 187
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 247
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + S I +L L+ I+ V GR K YSIH KM+ + +D+I
Sbjct: 248 VRLVADRAPSRDTYLRSVITELTGNLEGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 306
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE+ DCY A+ VVH LW VPG+ KDYI +P+F Y
Sbjct: 307 HDLVGVRILVEDVRDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVY 352
>gi|384135926|ref|YP_005518640.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290011|gb|AEJ44121.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 725
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 181/288 (62%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A +AH+GQ R SG+PY+ H + A +LA + ++ + AGLLHD ++D +S
Sbjct: 29 VRRAYEFAAKAHQGQTRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSD 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I +TFGA VA LV+GV+KL ++ +RE +A+ L MF+AMA D R ++IK
Sbjct: 89 STIVQTFGAEVATLVDGVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL + R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+
Sbjct: 143 LADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYY 202
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+ + + E + I L + L + N+ V GR K +YSI+ KM+ + +
Sbjct: 203 RIVNLMARKRQEREQYIEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFN 261
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D++ +R+IVE+ +DCY AL VVH +W +PG+ KDYI PK N Y
Sbjct: 262 EIYDLFAIRIIVESIKDCYGALGVVHTMWKPMPGRFKDYIAMPKANMY 309
>gi|238926103|ref|ZP_04657863.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
gi|238885993|gb|EEQ49631.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
Length = 739
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+++A+ A AHRGQ R SG+PY++H + A +L + + + A LHD ++D +
Sbjct: 29 IVRAYEFAANAHRGQERVSGEPYIVHPMHVAYILTTLHLDDETICAAFLHDVVEDTQTTL 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I FG V L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IK
Sbjct: 89 EEIEAVFGKNVMTLIDGVTKLGRIESMSKED------VKLENYRKMFLAMAKDIRVIMIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL + KRQR A+ETLE++ PLANRLGIS K +LE+LC ++L P+ +
Sbjct: 143 LADRLHNMRTLKYMREDKRQRIARETLEVYAPLANRLGISGIKAELEDLCLRYLEPEAYY 202
Query: 412 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L ++ + E + A++K+ L+ I + GR K YSI+ KM + +++
Sbjct: 203 TLVEEVKQKRRERQEFIQDAVQKIRAQLEAAGIEAEI-KGRAKHFYSIYRKMKRDNKSIN 261
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++V +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 262 EIYDLSAVRVLVSTVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 309
>gi|260589630|ref|ZP_05855543.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
gi|260539870|gb|EEX20439.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
Length = 769
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 191/315 (60%), Gaps = 19/315 (6%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E +E + + + H + KAF A AH+GQ+R SG+PY++H + A++LA +
Sbjct: 34 EVLYQELITSVRKYHPSTDISMIDKAFQIANNAHKGQVRKSGEPYIIHPLCVAIILADLE 93
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT- 329
+ + AGLLHD ++D ++ + I F A V LV+GV+KL QL N +A K
Sbjct: 94 LDKETIVAGLLHDVVEDTVMTSEEIREEFNAEVELLVDGVTKLGQL------NYSADKVE 147
Query: 330 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 388
V+A+ L MFLAMA D R +LIKLADRLHNM TL +P K++ A+ET++I+ P+A RL
Sbjct: 148 VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPHKQKEKARETMDIYAPIAQRL 207
Query: 389 GISTWKVQLENLCFKHLNPDQHTELSSKL------VECFDEAMVTSAIEKLEQALKDKNI 442
GIS K++L++L K+L P+ + +L K+ + F + +V +E+A + I
Sbjct: 208 GISKVKIELDDLSLKYLKPEVYYDLVEKINLKKSERQAFIDQIVGDVRAHIEKASINAQI 267
Query: 443 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 502
GR K +SI+ KM+ + T+D+I+D++ +R+IV+ DCY AL ++H+++ +P
Sbjct: 268 D-----GRIKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTVRDCYAALGIIHEMYKPIP 322
Query: 503 GKMKDYITRPKFNGY 517
G+ KDYI PK N Y
Sbjct: 323 GRFKDYIAMPKPNMY 337
>gi|331083062|ref|ZP_08332179.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405064|gb|EGG84601.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 769
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 191/315 (60%), Gaps = 19/315 (6%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E +E + + + H + KAF A AH+GQ+R SG+PY++H + A++LA +
Sbjct: 34 EVLYQELITSVRKYHPSTDISMIDKAFQIANNAHKGQVRKSGEPYIIHPLCVAIILADLE 93
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT- 329
+ + AGLLHD ++D ++ + I F A V LV+GV+KL QL N +A K
Sbjct: 94 LDKETIVAGLLHDVVEDTVMTSEEIREEFNAEVELLVDGVTKLGQL------NYSADKVE 147
Query: 330 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 388
V+A+ L MFLAMA D R +LIKLADRLHNM TL +P K++ A+ET++I+ P+A RL
Sbjct: 148 VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPHKQKEKARETMDIYAPIAQRL 207
Query: 389 GISTWKVQLENLCFKHLNPDQHTELSSKL------VECFDEAMVTSAIEKLEQALKDKNI 442
GIS K++L++L K+L P+ + +L K+ + F + +V +E+A + I
Sbjct: 208 GISKVKIELDDLSLKYLKPEVYYDLVEKINLKKSERQAFIDQIVGDVRAHIEKASINAQI 267
Query: 443 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 502
GR K +SI+ KM+ + T+D+I+D++ +R+IV+ DCY AL ++H+++ +P
Sbjct: 268 D-----GRIKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTVRDCYAALGIIHEMYKPIP 322
Query: 503 GKMKDYITRPKFNGY 517
G+ KDYI PK N Y
Sbjct: 323 GRFKDYIAMPKPNMY 337
>gi|295426083|ref|ZP_06818753.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
gi|295064252|gb|EFG55190.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
Length = 749
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 177/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LAA+G + +AAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIMHPTQVAGTLAALGLDPDTIAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDDIKKEFGEDVAFIVDGVTKLNKYQY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP+ +
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNPEAY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + E ++ AI L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 201 YRIVNLVAVKRSEREKYISDAISVLKKTLDNLGIKYEIY-GRPKHIYSIYKKMVNKHKDF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 DEIYDLLAVRVIVKTVRDCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGY 308
>gi|257064877|ref|YP_003144549.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
gi|256792530|gb|ACV23200.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
Length = 789
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 184/293 (62%), Gaps = 12/293 (4%)
Query: 230 EDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDD 287
ED ++ KA+ AE AH+GQ R SG+P++ H VE A++LA + + + A LLHDT++D
Sbjct: 64 EDMLLLEKAYRFAESAHKGQKRKSGEPFIAHPVEVALILADLRMDVDTLCAALLHDTVED 123
Query: 288 AFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DAR 346
+++ + TF VA+LVEGV+K++Q+ + + A+ + MF+AM+ D R
Sbjct: 124 TDVTHKDLLDTFNESVANLVEGVTKITQVEVESLTDEQAAT------IRKMFVAMSHDIR 177
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
++IKLADRLHNM TL AL +R A ETLEI+ P+A+RLGI + K +LE+L F +L+
Sbjct: 178 VIVIKLADRLHNMRTLSALREDRRIFKAHETLEIYAPIAHRLGIGSIKWELEDLSFYYLD 237
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P + +++ + E EA ++ IE L + D NI + GR K LYSI+ KM+ +
Sbjct: 238 PARFKQIAQMVAESRAQREAYLSRVIETLRDDVNDLNIKAHI-AGRPKHLYSINQKMINR 296
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ +R+IVE+ +DCY L VH LW +PG+ KDYI PK NGY
Sbjct: 297 EKGFSEIYDLIAVRIIVESVKDCYSVLGSVHSLWHPMPGRFKDYIAMPKANGY 349
>gi|33239669|ref|NP_874611.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237194|gb|AAP99263.1| GTP pyrophosphokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 776
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 172/285 (60%), Gaps = 9/285 (3%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
AF A R H+GQ R SGDPY+ H + A LL IGA+ TV+AAG LHD ++D ++ +
Sbjct: 72 AFDLAFRLHKGQFRVSGDPYISHPIAVADLLRDIGASPTVIAAGFLHDVVEDTSITLPEL 131
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
FG+ V LVEGV+KL + + T +A+ L MFLAMA D R VL+KLAD
Sbjct: 132 EAYFGSEVRGLVEGVTKLGGI------HFTNRTEAQAENLRKMFLAMARDIRVVLVKLAD 185
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHNM T++ L K+QR A ET EI+ PLANRLGI +K +LE+L FK L P+ + ++
Sbjct: 186 RLHNMRTIEVLQPAKQQRIALETREIYAPLANRLGIGRFKWELEDLAFKLLEPESYKKIQ 245
Query: 415 SKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 472
++ E + IE L+ L + ++ + GR K L+ I KM K+ EI+
Sbjct: 246 QEVATKRSEREKRLHLTIELLKNRLINAGLNDCNIDGRPKHLFGIWSKMEKQDKEFHEIY 305
Query: 473 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+ LR+IV N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 306 DVAALRIIVPNLETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|304316999|ref|YP_003852144.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778501|gb|ADL69060.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 718
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A +AH GQ R SG+PY++H VE AM+L + + + +A+GLLHD ++D +
Sbjct: 20 NLIFKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVIEDTSI 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD I FG +ADLV+GV+KL + ++ +A+ + M +AMA D R ++
Sbjct: 80 TYDDIKNEFGQEIADLVDGVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIM 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD
Sbjct: 134 IKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDD 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ + E + I+KL++ L + I V GR K YSI+ KM ++ T
Sbjct: 194 YYSLVEKVAKKRKEREESIKELIDKLKEKLNEIGIKAEV-DGRPKHFYSIYKKMKQQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L VH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLMAVRVIVNTVKDCYGTLGAVHTLWKPMPGRFKDYIAMPKPNMY 302
>gi|433655146|ref|YP_007298854.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293335|gb|AGB19157.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 718
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A +AH GQ R SG+PY++H VE AM+L + + + +A+GLLHD ++D +
Sbjct: 20 NLIFKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVIEDTSI 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD I FG +ADLV+GV+KL + ++ +A+ + M +AMA D R ++
Sbjct: 80 TYDDIKNEFGQEIADLVDGVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIM 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD
Sbjct: 134 IKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDD 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ + E + I+KL++ L + I V GR K YSI+ KM ++ T
Sbjct: 194 YYSLVEKVAKKRKEREESIKELIDKLKEKLNEIGIKAEV-DGRPKHFYSIYKKMKQQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY L VH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLMAVRVIVNTVKDCYGTLGAVHTLWKPMPGRFKDYIAMPKPNMY 302
>gi|423321551|ref|ZP_17299422.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
gi|405594489|gb|EKB67900.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
Length = 746
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLNELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|227879058|ref|ZP_03996948.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
gi|256843052|ref|ZP_05548540.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256850296|ref|ZP_05555725.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
gi|262046025|ref|ZP_06018989.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
gi|293381310|ref|ZP_06627313.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
gi|312977236|ref|ZP_07788984.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
gi|423318875|ref|ZP_17296752.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
gi|227861353|gb|EEJ68982.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
gi|256614472|gb|EEU19673.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256712933|gb|EEU27925.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
gi|260573984|gb|EEX30540.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
gi|290922126|gb|EFD99125.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
gi|310895667|gb|EFQ44733.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
gi|405591738|gb|EKB65207.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
Length = 746
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLNELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|410464128|ref|ZP_11317593.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982755|gb|EKO39179.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 740
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH GQ+R SG+PYL H +E A +LA + ++ +A+GLLHDT++D +
Sbjct: 22 LITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLDAASIASGLLHDTVEDTKAT 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VAD+V+GV+K+S + +E +A+ + M LAMA D R VL+
Sbjct: 82 VDELEELFGEEVADIVDGVTKISLIPFETKEE------AQAENIRKMILAMAEDIRVVLV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ K+ A+ET++I+ PLANRLG+ K +LE+ F++L PD +
Sbjct: 136 KLADRLHNMRTLEFQKPHKQAIIAQETMDIYAPLANRLGLHRIKTELEDWSFRYLKPDIY 195
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L + DE + I L L NI ++ GR K L+S+H KM + LT+
Sbjct: 196 AQLVEGVATHHTVDETFIERVIGHLNDLLGPNNIKARIV-GRRKHLWSVHNKMRVQGLTI 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++HD+ R+IVE +CY L +VH LW VPG+ KDYI+ PK N Y
Sbjct: 255 DQVHDLVAFRVIVETIRECYHVLGLVHSLWKPVPGRFKDYISMPKANMY 303
>gi|218288848|ref|ZP_03493099.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240937|gb|EED08114.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
Length = 725
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 181/288 (62%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A +AH+GQ R SG+PY+ H + A +LA + ++ + AGLLHD ++D +S
Sbjct: 29 VRRAYEFAAKAHQGQTRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSD 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I +TFGA VA LV+GV+KL ++ +RE +A+ L MF+AMA D R ++IK
Sbjct: 89 SAIVQTFGAEVATLVDGVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL + R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+
Sbjct: 143 LADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYY 202
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+ + + E + I L + L + N+ V GR K +YSI+ KM+ + +
Sbjct: 203 RIVNLMARKRQEREQYIEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFN 261
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D++ +R+IVE+ +DCY AL VVH +W +PG+ KDYI PK N Y
Sbjct: 262 EIYDLFAIRIIVESIKDCYGALGVVHTMWKPMPGRFKDYIAMPKANMY 309
>gi|33866854|ref|NP_898413.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. WH 8102]
gi|33639455|emb|CAE08839.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. WH 8102]
Length = 776
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/293 (45%), Positives = 177/293 (60%), Gaps = 13/293 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E ++ AF + H GQ RASGDP ++H V A LL IGA+++V+AAG LHD ++D
Sbjct: 66 EALLVAAFDFGFQLHEGQFRASGDPCIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTD 125
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ D I FG+ V +LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 126 VTPDQIELHFGSEVRELVEGVTKLGGIHF----NNRTE--AQAENLRRMFLAMASDIRVV 179
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 180 LVKLADRLHNMRTLGALKEEKRQRIARETKEIYAPLANRLGIGRFKWELEDLAFKLLEPE 239
Query: 409 Q----HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E++SK E + VT A+ L L + + GR K L+ I KM ++
Sbjct: 240 AFREIQQEVASKRSEREERLGVTVAL--LNDRLAQAGLEGCEVSGRPKHLFGIWSKMQRQ 297
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ LR+I + E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 298 QKAFHEIYDVAALRIITPSVEACYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|428313851|ref|YP_007124828.1| RelA/SpoT family (p)ppGpp synthetase [Microcoleus sp. PCC 7113]
gi|428255463|gb|AFZ21422.1| (p)ppGpp synthetase, RelA/SpoT family [Microcoleus sp. PCC 7113]
Length = 751
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + +AF A + H GQ+RASG+PY+ H V A LL +G +S ++AAG LHD ++D +
Sbjct: 38 NLISRAFEFAYKLHEGQLRASGEPYIAHPVAVAGLLRDLGGSSVMIAAGFLHDVVEDTDV 97
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 98 TPEEIESRFGVEVRRLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAADIRVI 150
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L K++ ++ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 151 VVKLADRLHNMRTLEHLNPQKQRSISQETREIFAPLANRLGIGRVKWELEDLAFKYLEPE 210
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ + E E ++ + L + L+ I L + GR K LY I+ KM +++
Sbjct: 211 SYRQMQQLVAERRTDRETRLSKVGDILRERLESTEIHCLEISGRPKHLYGIYQKMQRQQK 270
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +RLI++ +EDCY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 271 GFHEIYDLAAMRLILQTKEDCYRALAIVHDAFRPIPGRFKDYIGLPKPNRY 321
>gi|94986614|ref|YP_594547.1| guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
gi|94730863|emb|CAJ54226.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
Length = 731
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 181/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A AH GQ+R SG+PYL H + A +L+ +G ++ + A LLHDT++D S
Sbjct: 32 LVQKAYVYAAAAHEGQLRLSGEPYLSHPLAVAEMLSEMGFDAYAIMAALLHDTVEDTKCS 91
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FG VAD+V GV+K+S +S ++E +A+ M LAM+ D R ++
Sbjct: 92 LEDIETEFGKQVADIVNGVTKISMMSFESKEEQ------QAENFRKMILAMSQDIRVPIV 145
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ KRQ A+ET++I+ PLANRLG+ K++LE+L FK+L+PD +
Sbjct: 146 KLADRLHNMRTLNFQKPHKRQSIAQETMDIYAPLANRLGLHRIKLELEDLSFKYLHPDIY 205
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
T++S+ + + ++ I K+ +A+ KN + GR K +YSIH KM+++ LT+
Sbjct: 206 TQISTWMHSNRVVERNLIERIISKI-KAILHKNGLKGTVQGRVKHVYSIHKKMVEQHLTL 264
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D +HDI R+IV+ DCY L ++H W + G+ KDYI+ PK NGY
Sbjct: 265 DSMHDILAFRVIVDTISDCYAVLGLLHSQWKPLHGRFKDYISMPKVNGY 313
>gi|444919613|ref|ZP_21239613.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
gi|444708165|gb|ELW49258.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
Length = 740
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 180/295 (61%), Gaps = 17/295 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A LLA + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLIHPLEVAGLLAELKLDEASIVTGLLHDTIEDTLA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG VA LV+GV+KLS+ S A + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGPEVAQLVDGVTKLSKFSASA---TLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + K++R A+ETL+I+ PLANRLGIS K +LE+L F++L P +
Sbjct: 138 VKLADRTHNMRTLDHMSEEKQRRIAQETLDIYAPLANRLGISWVKTELEDLSFRYLKPQE 197
Query: 410 HTELSSKL------VECFDEAMVTSAIEKL-EQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ L K+ E + + + T KL E+ LK + + GR K +YSI+ KM
Sbjct: 198 YLALQDKIGRRKKEREKYIDDVSTLITTKLTERGLKGE------VSGRFKHVYSIYKKMK 251
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ + ++IHD+ R+I + CY+AL +VHQLW VPG+ KD+I PK N Y
Sbjct: 252 SQGIEFEQIHDVIAFRIITNSMPACYEALGLVHQLWKPVPGRFKDFIAIPKPNMY 306
>gi|313123577|ref|YP_004033836.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280140|gb|ADQ60859.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 753
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP+++
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNPEEY 200
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++ S + E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 201 YKIVSMMDAKRSEREDYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKDF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 NEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 308
>gi|158335664|ref|YP_001516836.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
gi|158305905|gb|ABW27522.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
Length = 753
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 182/301 (60%), Gaps = 11/301 (3%)
Query: 221 AQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGL 280
A+ K I + + +AF + H GQ RASG+PY+ H V A LL +G ++ ++AAG
Sbjct: 28 AEDKDGIPEQTLICRAFNFGYQLHEGQRRASGEPYIAHPVSVAELLRDLGGSAAMIAAGF 87
Query: 281 LHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMF 339
LHD ++D ++ + I FG V LVEGV+KLS+ N ++KT EA+ MF
Sbjct: 88 LHDVVEDTDVTPETIEAEFGLEVRQLVEGVTKLSKF-------NFSTKTEREAENFRRMF 140
Query: 340 LAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 398
LAMA D R +++KLADRLHNM TL+ LP K++R A+ET ++F PLANRLGI +K +LE
Sbjct: 141 LAMAQDIRVIVVKLADRLHNMRTLEHLPPVKQRRIAQETRDVFAPLANRLGIWRFKWELE 200
Query: 399 NLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 456
+L FK+L PD + + + + E + AI L L+ L + GR K L+S
Sbjct: 201 DLAFKYLEPDTYRRMQQLVADKRTDREDHIEQAITILHDRLEPICSKHLEISGRPKHLFS 260
Query: 457 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 516
I KM +++ EI+D+ +R+IV+ E+CY+AL VVH + +PG+ KDYI PK N
Sbjct: 261 ISQKMERQQKEFHEIYDVAAVRVIVKTNEECYRALAVVHDCFRPIPGRFKDYIGLPKSNR 320
Query: 517 Y 517
Y
Sbjct: 321 Y 321
>gi|427704011|ref|YP_007047233.1| RelA/SpoT family (p)ppGpp synthetase [Cyanobium gracile PCC 6307]
gi|427347179|gb|AFY29892.1| (p)ppGpp synthetase, RelA/SpoT family [Cyanobium gracile PCC 6307]
Length = 773
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 175/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E V AF A + H GQ RASG+PY++H + A LL IGA++ V+AAG LHD ++D
Sbjct: 64 EALVATAFDFAYQLHDGQFRASGEPYIVHPIAVAGLLRDIGASAAVIAAGFLHDVVEDTQ 123
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ D I FG V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 124 VTPDEIEARFGEEVRALVEGVTKLGGI------HFTNRTEAQAENLRRMFLAMASDIRVV 177
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL AL K+QR A+ET +I+ PLANRLGI +K +LE+L FK L P+
Sbjct: 178 LVKLADRLHNMRTLGALKPEKQQRIARETRDIYAPLANRLGIGRFKWELEDLAFKVLEPE 237
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ ++ E + + ++ L L + + GR K LY I KM +++
Sbjct: 238 SYRDVQQQVATKRSEREERLGATVQLLRDRLVAAGLQDCEVSGRPKHLYGIWSKMQRQQK 297
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR++ + E CY+AL VVH ++ +PG+ KDYI PK NGY
Sbjct: 298 AFHEIYDVAALRILCPSVESCYRALAVVHDIFRPIPGRFKDYIGLPKPNGY 348
>gi|189425343|ref|YP_001952520.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter lovleyi SZ]
gi|189421602|gb|ACD96000.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter lovleyi SZ]
Length = 716
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 184/291 (63%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ + H+GQ R SG+PY++H +E A LLA + + + G LHDT++D
Sbjct: 21 NLIRKAYVYCAKVHQGQTRLSGEPYIIHPLEVAGLLAGLKLDVPSIVTGFLHDTIEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG VA+LV+GV+K+S++ +E N +A+ M +AMA D R +L
Sbjct: 81 TSEELAEMFGKEVAELVDGVTKISKIHFKTKEEN------QAENFRKMLIAMANDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ ++ET++I+ P+A+RLGIS K +LE+L F++L PD
Sbjct: 135 VKLADRLHNMRTLQFQPDTKQRSISRETMDIYAPIAHRLGISWIKTELEDLSFRYLQPDV 194
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 466
+ +L++K+ E S I ++++A++ K + + + GR K LYSI+ KM K+K+
Sbjct: 195 YFDLATKIQRKKQER--ESFIHEIQEAIRQKLVEHQIVGEVSGRSKHLYSIYRKMEKRKV 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ LR++V++ + CY+ L ++H W +PG+ KDYI PK N Y
Sbjct: 253 DFEEIYDLTALRILVDDIKSCYEVLGLIHSSWRPIPGRFKDYIAMPKGNMY 303
>gi|429766249|ref|ZP_19298523.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
gi|429185229|gb|EKY26218.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
Length = 727
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 185/294 (62%), Gaps = 18/294 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AH+ Q R SG+PY++H +E A +LA +G +++ + AGLLHD ++D
Sbjct: 19 NIVKKAYNLAFEAHKEQKRESGEPYIIHPIEVATILAELGMDTSTIVAGLLHDVIEDTDY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F +A+LV GV+K++++ ++E +AD M LAMA D R ++
Sbjct: 79 TYEDIKNIFSEEIANLVSGVTKITKMEYKSKEEQ------QADNFRKMLLAMANDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+++ AKETL+I+ PLA+RLGIS K +LE+LCF++L+ ++
Sbjct: 133 IKLADRLHNMRTLKYMSKEKQKKTAKETLDIYAPLAHRLGISKVKWELEDLCFRYLHEEE 192
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ +L ++ E + + EKL++A D +I GR K YSI+ KM+
Sbjct: 193 YYDLVKQIAEKRVERETYIAKTIKDLYEKLDEAGIDSDID-----GRPKHFYSIYRKMVT 247
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K ++++I D+ +R++V + +DCY+ L VVH ++ +PG+ KDYI PK N Y
Sbjct: 248 KNKSIEQIFDLTAIRILVNSVKDCYEVLGVVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|375335469|ref|ZP_09776813.1| (p)ppGpp synthetase I SpoT/RelA [Succinivibrionaceae bacterium
WG-1]
Length = 709
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A AH GQ R+SG+PY+ H V A +LA + ++ + A LLHD ++D +
Sbjct: 21 DRIAQAFVTARNAHEGQTRSSGEPYITHPVAVATILADMHMDTETIMAALLHDVVEDTPI 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVL 349
+ + + + FG + +LV GV+KL +L R++ K +A+ M +AM +D R +L
Sbjct: 81 NQEQLEQLFGPTITNLVNGVTKLDKLQ--FRDH----KEAQAENFRKMIMAMTSDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM T+DAL KR+R A+ETLEIF P+ANRLGI + K +L++L FK + P +
Sbjct: 135 IKLADRTHNMRTIDALRPDKRRRIARETLEIFAPIANRLGIYSVKKELQDLGFKAMYPMR 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L + + + ++ S +E ++ L + +I VL GR K LYSI+ KM+ K+
Sbjct: 195 YRVLKEAVKKARNNRNEIINSILEDIKGRLSETDIKSRVL-GREKQLYSIYLKMVHKECQ 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+YG R+IVEN ++CY+ L +H L+ PG KDYI PK NGY
Sbjct: 254 FHEIMDVYGFRVIVENVDNCYRVLGHMHNLFKPRPGAFKDYIAIPKINGY 303
>gi|315038166|ref|YP_004031734.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
gi|325956617|ref|YP_004292029.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
gi|385817505|ref|YP_005853895.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
gi|312276299|gb|ADQ58939.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
gi|325333182|gb|ADZ07090.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
gi|327183443|gb|AEA31890.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
Length = 746
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|291522836|emb|CBK81129.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus catus GD/7]
Length = 770
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 183/286 (63%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A AH+GQ+R SG+PY++H + A++LA + + + GLLHD ++D ++ +
Sbjct: 54 KAYNIANNAHKGQLRKSGEPYIIHPLCVALILADLELDKETIVGGLLHDVVEDTIMTEED 113
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I R F A +A +V GV+KL QLS + ++A+ L MFLAMA D R +LIKLA
Sbjct: 114 ITREFSAEIALIVSGVTKLGQLS-----YSKDKVEIQAENLRKMFLAMAKDIRVILIKLA 168
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K++ A+ET++I+ P+A RLGIS K++L++L ++L P+ + +L
Sbjct: 169 DRLHNMRTLKYMTPAKQKEKARETMDIYAPIAQRLGISKIKIELDDLSLRYLEPEVYYDL 228
Query: 414 SSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + L +A V + +E++ Q + I V GR K +SI+ KM+ + T+DEI
Sbjct: 229 ARQINLKRSERQAFVDAIVEEVSQHMAQSGIKAQV-NGRVKHFFSIYKKMVNQDKTLDEI 287
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ +R+IV+ +DCY AL ++H+++ +PG+ KDYI PK N Y
Sbjct: 288 YDLFAVRIIVDTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKQNMY 333
>gi|254784428|ref|YP_003071856.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Teredinibacter turnerae T7901]
gi|237685288|gb|ACR12552.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Teredinibacter turnerae T7901]
Length = 704
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 179/288 (62%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+Y AE+AH GQ R SG+PY+ H + A +LA+I + + A +LHD ++D +
Sbjct: 23 VKRAYYYAEQAHTGQFRRSGEPYITHPLAVANILASIHMDHQSLMAAMLHDVIEDTGIGK 82
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I FG VA++V+GVSKL+++ + A K +A M +AMA D R +++K
Sbjct: 83 SAISHQFGDQVAEIVDGVSKLAKIDY----ESQAEK--QAKNFQKMAMAMARDLRVIVVK 136
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
L+DRLHNM TL ALP K++R AKETLEI+ P+A+RLG++ W+++ E+ F ++P + T
Sbjct: 137 LSDRLHNMRTLGALPPEKKRRIAKETLEIYAPIAHRLGMNDWRIEFEDRGFAAMHPLRAT 196
Query: 412 ELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L + L V +A+V +E L+ + I LV+ GR K LYSI+ KM K + +
Sbjct: 197 RLHASLQQVRGNRKAIVEKIQSSIEMRLQRETIEGLVI-GREKHLYSIYNKMRGKHKSFE 255
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+Y R+IVEN + CY+AL +H L+ P + KDYI PK NGY
Sbjct: 256 EIMDVYAFRIIVENIDTCYRALGAIHNLYKPKPNEFKDYIAIPKENGY 303
>gi|337285951|ref|YP_004625424.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfatator indicus DSM
15286]
gi|335358779|gb|AEH44460.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfatator indicus DSM
15286]
Length = 727
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 188/294 (63%), Gaps = 17/294 (5%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A +AH GQ+R SG+PYL H + A +LA + + +AAGLLHDT++D ++
Sbjct: 27 LVEKAYVFAAKAHAGQVRRSGEPYLAHPLSVAYILARMKLDLPTIAAGLLHDTVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG VA++V+GV+K++ LS ++ + +A+ M LAMA D R +L+
Sbjct: 87 IEDIKKHFGPVVAEIVDGVTKIAHLSARSKVHK------QAENFRKMLLAMAEDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ +P KR+R A+ETL+I+ PLA+RLGI K +LE+L F +L P+++
Sbjct: 141 KLADRLHNMKTLEFMPDHKRKRIAQETLDIYAPLASRLGIDWLKQELEDLSFMYLYPEEY 200
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQALKDK----NISFLVLCGRHKSLYSIHCKMLKKKL 466
L ++ + A I+++++ +K+K I VL GR K LYSI K+ + L
Sbjct: 201 KTLREEVEKVV--AARQDFIDEIKKVIKEKLDEEGIEAKVL-GRRKHLYSIFRKLQRNNL 257
Query: 467 TMDE---IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ I+DI GLR+IV+ ++CY+ L ++H LW +PG+ KDYI PK N Y
Sbjct: 258 AIDQLYLIYDIIGLRVIVKKVKECYEVLGIIHSLWKPIPGRFKDYINLPKANMY 311
>gi|417837430|ref|ZP_12483668.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
pf01]
gi|338760973|gb|EGP12242.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
pf01]
Length = 749
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A++AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E + AI L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 DFSEIYDLLAVRVIVKSVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGY 310
>gi|295692846|ref|YP_003601456.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
gi|295030952|emb|CBL50431.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
Length = 746
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|332711840|ref|ZP_08431770.1| (p)ppGpp synthetase, RelA/SpoT family [Moorea producens 3L]
gi|332349168|gb|EGJ28778.1| (p)ppGpp synthetase, RelA/SpoT family [Moorea producens 3L]
Length = 754
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 180/290 (62%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H+GQ R SG+PY+ H V A LL +G NST++AAG LHD ++D ++
Sbjct: 41 LIAEAFKFAYQLHQGQSRKSGEPYIAHPVAVADLLRDLGGNSTMIAAGFLHDVVEDTEIT 100
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FG V +LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 101 PEEIESRFGVEVRNLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAADIRVIV 153
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ L K+ + A+ET +IF PLANRLGI +K +LE+L FK+L D
Sbjct: 154 VKLADRLHNMRTLEYLKPQKQGQIAQETRDIFAPLANRLGIGCFKWELEDLAFKYLERDA 213
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ S + E E + E L + ++ + + + R K LY I+ KM ++
Sbjct: 214 YREIQSLVAERRSDREQRLKEVSELLRERIQKTGVHCVDISSRPKHLYGIYQKMQRQNKG 273
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI +R+IVE +E+CY+AL VVH L+ +PG+ KDYI PK N Y
Sbjct: 274 FHEIYDIAAMRVIVETKEECYRALAVVHDLFRPIPGRFKDYIGLPKPNRY 323
>gi|302389921|ref|YP_003825742.1| (p)ppGpp synthetase I SpoT/RelA [Thermosediminibacter oceani DSM
16646]
gi|302200549|gb|ADL08119.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosediminibacter oceani DSM
16646]
Length = 721
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A+ AH GQ R SG+ ++ H +E AM+LA + ++ +AA LLHD ++D
Sbjct: 21 ELVRRAYEFAKNAHDGQHRVSGELFIFHPLEVAMILADLELDTITIAASLLHDVVEDTNY 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + I + FG+ +A LV+GV+KLS+L +E +A+ L MFLAMA D R +L
Sbjct: 81 SLEDIAKNFGSEIALLVDGVTKLSKLEYKTKEEQ------QAENLRKMFLAMAKDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++ A ETLEIF PLA+RLGIS K +LE+L F++L P+
Sbjct: 135 IKLADRLHNMRTLKYLPEKKQKEIAVETLEIFAPLAHRLGISKIKWELEDLAFRYLEPNH 194
Query: 410 HTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL K+ + E + + I L + L I + GR K YSI+ KM ++ +
Sbjct: 195 YYELVDKVAKKRREREEHINNMIALLRERLTAAGIKAEI-QGRPKHFYSIYKKMKEQNKS 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I D+ +R+IV+ DCY AL VVH LW +PG+ KDYI PK N Y
Sbjct: 254 FEQIFDLTAVRVIVDTVRDCYAALGVVHTLWKPIPGRFKDYIAMPKPNMY 303
>gi|268319355|ref|YP_003293011.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
gi|262397730|emb|CAX66744.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
Length = 749
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A++AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E + AI L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 DFSEIYDLLAVRVIVKSVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGY 310
>gi|433444159|ref|ZP_20409169.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
gi|432001807|gb|ELK22676.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
Length = 732
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 178/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ +A+ A+ AHR Q R SG+PY++H ++ A +L + + +AAG LHD ++D ++
Sbjct: 27 FIERAYEFAKEAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHDVVEDTHVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + R FG VA LV+GV+KL ++ + E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGKEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E + I+++ L++ I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEMRARLQEVGIQAEI-SGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IVE+ +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRIIVESIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|350569311|ref|ZP_08937707.1| GTP diphosphokinase [Propionibacterium avidum ATCC 25577]
gi|348660129|gb|EGY76839.1| GTP diphosphokinase [Propionibacterium avidum ATCC 25577]
Length = 773
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 173/286 (60%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +++
Sbjct: 74 RAYRTAEHYHRGQTRKSGDPYITHPLAVTMILAELGMDEQTLCAGLLHDTVEDTSYTHEQ 133
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ ++ +A+ + M +AM+ D R ++IKLA
Sbjct: 134 LTADFGEEVALLVDGVTKLDKVQ--------YGESAKAETIRKMVIAMSRDIRVLVIKLA 185
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+
Sbjct: 186 DRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEI 245
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ E EA + I + Q L + I V GR K YSI+ KM+ + +I
Sbjct: 246 VHMVAEQAPQREAQLKEVIAIVRQDLDEAGIEATVY-GRPKHYYSIYQKMVVRGRDFSDI 304
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 305 YDLIGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|300812618|ref|ZP_07093031.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496399|gb|EFK31508.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 753
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYE------YKSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 308
>gi|239827847|ref|YP_002950471.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. WCH70]
gi|239808140|gb|ACS25205.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. WCH70]
Length = 732
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AHR Q R SG+PY++H ++ A +L + + +AAG LHD ++D
Sbjct: 26 EFIKKAYEFANHAHRDQYRKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHDVVEDTEA 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + R FG+ VA LV+GV+KL ++ ++E +A+ MFLAMA D R +L
Sbjct: 86 TKEDLEREFGSEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 200 YYRIVNLMKKKRAEREQYLEEVIQEVRERLNEVSIP-CEISGRPKHIYSIYRKMVMQNKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|322420743|ref|YP_004199966.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M18]
gi|320127130|gb|ADW14690.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M18]
Length = 716
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 183/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLKLDLPAVVTGLLHDTVEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + FGA VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 THEELESLFGAEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQL 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L+SK+ + E+ V++ E +++ L++ I V GR K LYSI+ KM + +
Sbjct: 195 YYDLASKVAKKKQERESYVSTVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVD 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI+D+ +R+ V++ +CY+ L V+H W +PG+ KDYI PK N Y
Sbjct: 254 IDEIYDLIAIRVSVDDIRECYEVLGVIHSTWKPIPGRFKDYIAMPKGNMY 303
>gi|237667442|ref|ZP_04527426.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237655790|gb|EEP53346.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 737
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 184/294 (62%), Gaps = 15/294 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A+ AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 ELVKKAYNFAKEAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDC 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S++ R F VA+LV+GV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SFEDASRMFNPEVANLVDGVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPANKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ +L + E + + +V +KLE A D +I GR K YSI+ KM+
Sbjct: 196 YYDLVKDIAEKRVERESYIQDIVNDLYKKLEGAGIDSDID-----GRPKHFYSIYKKMVN 250
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K +++EI D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 KNKSIEEIFDLTAIRVLVNSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMY 304
>gi|42519264|ref|NP_965194.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
gi|385825782|ref|YP_005862124.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
gi|41583552|gb|AAS09160.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
gi|329667226|gb|AEB93174.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
Length = 749
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A++AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E + AI L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 DFSEIYDLLAVRVIVKSVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGY 310
>gi|414079723|ref|YP_007001147.1| RelA/SpoT family protein [Anabaena sp. 90]
gi|413973002|gb|AFW97090.1| RelA/SpoT family protein [Anabaena sp. 90]
Length = 757
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 176/289 (60%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A H GQ+R SG+PY+ H V A +L +G + ++AAGLLHD ++D ++
Sbjct: 43 LICRAFQFAYELHGGQIRKSGEPYIAHPVAVAEILRELGGSPAMIAAGLLHDVVEDTEVT 102
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FGA V LVEGV+KLS++ N T+ +A+ MFLAMA D R +++
Sbjct: 103 SEDIEARFGAEVRLLVEGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVV 156
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + RQR A+ET +IF PLANRLGI K +LE+L FK+L P+ +
Sbjct: 157 KLADRLHNMRTLQYMSEASRQRSAQETRDIFAPLANRLGIWQIKWELEDLAFKYLEPEAY 216
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E + E E + A + L + L ++ L + GR K LYSI+ KM +++
Sbjct: 217 RETQQCVAEKRTAREEKLLKATDTLRRRLLKAGVNCLEISGRPKHLYSIYQKMQRQQKEF 276
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 277 HEIYDLAALRIIVQTNEECYRALAVVHDSFRPIPGRFKDYIGLPKPNHY 325
>gi|381210458|ref|ZP_09917529.1| GTP pyrophosphokinase [Lentibacillus sp. Grbi]
Length = 733
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 180/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ +A+ AE AH+ Q R SG+PY++H V+ A +L + + +A G LHD ++D ++
Sbjct: 27 FLHRAYEFAEDAHKDQFRKSGEPYIVHPVQVAGILVDLEMDPVTIAGGFLHDVVEDTEVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + +F VA LV+GV+KL ++ ++E ++A+ MF+AMA D R +LI
Sbjct: 87 LEQLEDSFNEEVAMLVDGVTKLGKIKYKSKE------ALQAENHRKMFVAMARDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPPNKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + + E + I++LE+ L D NI + GR K LYSI+ KM K+
Sbjct: 201 YRIVQLMKQKREERETYIDEVIDELEKQLDDVNIEADI-SGRPKHLYSIYRKMAKQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVHSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLY 308
>gi|227893456|ref|ZP_04011261.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
gi|227864735|gb|EEJ72156.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
Length = 749
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 30 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 89
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 90 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 143
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 144 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 200
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 201 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 258
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 259 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 311
>gi|227499575|ref|ZP_03929682.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
gi|227218334|gb|EEI83588.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
Length = 726
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ AE HRGQ R SG+ Y +H + A L+ + + + AGL+HD L+D +
Sbjct: 26 NLIKKAYDFAELHHRGQKRNSGEDYFIHPIAVARKLSEMKLDDETICAGLMHDVLEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + + FG + LV+GV+KL L+ +RE +A+ + M +AM+ D R VL
Sbjct: 86 SREQMAEVFGEEITFLVDGVTKLKNLNYTSREEK------QAENIRKMVMAMSNDVRVVL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKL+DRLHNM TL+ + K+ + A ETLEI+VPLA+RLGI + K +LE+LCF++ P++
Sbjct: 140 IKLSDRLHNMKTLEYMTRKKQIQIADETLEIYVPLAHRLGIYSLKWELEDLCFRYQEPEK 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL+ + EA + I+ L ++L NI+F + GR KSLYSI+ KM + +
Sbjct: 200 YYELAEMVNVKRREREAYINEIIDTLSKSLSGTNINFEI-SGRPKSLYSINKKMERNGIA 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+ +CY L VH LW +P ++KDYI +PK NGY
Sbjct: 259 FDEIYDLTAIRVIVDTIAECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGY 308
>gi|403515171|ref|YP_006655991.1| PpGpp synthetase [Lactobacillus helveticus R0052]
gi|403080609|gb|AFR22187.1| PpGpp synthetase [Lactobacillus helveticus R0052]
Length = 746
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 175/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|118580813|ref|YP_902063.1| (p)ppGpp synthetase I SpoT/RelA [Pelobacter propionicus DSM 2379]
gi|118503523|gb|ABL00006.1| (p)ppGpp synthetase I, SpoT/RelA [Pelobacter propionicus DSM 2379]
Length = 717
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ + H+GQ R SG+PY++H +E A LLA + + V G LHDT++D
Sbjct: 21 NLIRKAYVYCAKVHQGQTRLSGEPYIIHPMEVAGLLAELRLDVASVITGFLHDTIEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG VA LV+GV+K+S++ + + +A+ M LAM+ D R +L
Sbjct: 81 TAEELTSLFGDEVATLVDGVTKISKIHFKTKAES------QAENFRKMLLAMSIDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ P K++ A+ET++I+ P+ANRLGIS KV+LE+L F++LNP+
Sbjct: 135 VKLADRLHNMRTLEFQPELKQRSIAQETMDIYAPIANRLGISWIKVELEDLSFRYLNPEI 194
Query: 410 HTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L+ K L + EA V+ A + L I V GR K LYSI+ KML + +
Sbjct: 195 YFDLARKISLKKREREAYVSEAKTVIADKLGQHGIKGEV-SGRSKHLYSIYRKMLARNVE 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI+D+ LR++V++ DCY+ L V+H W +PG+ KDYI PK N Y
Sbjct: 254 LDEIYDLIALRILVDDVRDCYEVLGVIHSAWKPIPGRFKDYIAMPKGNMY 303
>gi|401564457|ref|ZP_10805350.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
gi|400188859|gb|EJO22995.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
Length = 743
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ AE+AH GQ+R SGD Y++H + A +L + + + A LLHD ++D
Sbjct: 28 DKIRKAYAYAEQAHSGQVRISGDAYIIHPLNVAYILTGLHLDDETICAALLHDVVEDTCA 87
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG + L++GV+KL ++ +++E+ V+ + MFLAMA D R ++
Sbjct: 88 TLEEMEAEFGKNIMALIDGVTKLGRIEYMSKED------VQLENYRKMFLAMAKDIRVIM 141
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + KR R AKETLE++ PLANRLGIS KV+LE+LC ++L P+
Sbjct: 142 IKLADRLHNMRTLKYMREDKRHRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEA 201
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L ++ E + +IE++ + L+ I + GR K YSI+ KM + +
Sbjct: 202 YYTLVEEVKHKRKERQEFIRESIEQIREKLEAAGIKAEI-KGRAKHFYSIYRKMKRDNKS 260
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 261 VNEIYDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|281418020|ref|ZP_06249040.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
gi|281409422|gb|EFB39680.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
Length = 724
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 182/279 (65%), Gaps = 12/279 (4%)
Query: 243 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 302
AH+GQ R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG
Sbjct: 34 AHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDE 93
Query: 303 VADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 361
VA+LV+GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM T
Sbjct: 94 VANLVDGVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRT 147
Query: 362 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 421
L +P K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ +
Sbjct: 148 LKYMPTEKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKR 207
Query: 422 DEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 478
E + I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R
Sbjct: 208 RER--EAYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVR 265
Query: 479 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+IV +DCY L +VH+++ +PG+ KDYI PK N Y
Sbjct: 266 VIVTTVKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMY 304
>gi|300787167|ref|YP_003767458.1| GTP pyrophosphokinase [Amycolatopsis mediterranei U32]
gi|384150512|ref|YP_005533328.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|399539049|ref|YP_006551712.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|299796681|gb|ADJ47056.1| GTP pyrophosphokinase [Amycolatopsis mediterranei U32]
gi|340528666|gb|AEK43871.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|398319819|gb|AFO78766.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
Length = 784
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 84 RAYDVAEELHRNQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYAVES 143
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA+LV+GV+KL ++ + EA+ + M +AMA D R ++IKLA
Sbjct: 144 LKADFGDKVAELVDGVTKLDKVQ--------LGSSAEAETIRKMVIAMAKDPRVLVIKLA 195
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 196 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 255
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + S I L L I+ V GR K YSIH KM+ + +D+I
Sbjct: 256 VRLVADRAPSRDIYLRSVITDLTSNLVSSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 314
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE+ DCY A+ VVH LW VPG+ KDYI +P+F Y
Sbjct: 315 HDLVGVRILVEDVRDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVY 360
>gi|318040683|ref|ZP_07972639.1| metal dependent phosphohydrolase [Synechococcus sp. CB0101]
Length = 776
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 176/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + AF+ A + H GQ+RASG+PY+ H V A LL IGA++ V+AAG LHD ++D
Sbjct: 60 EGLLASAFHFAFQLHDGQVRASGEPYICHPVAVADLLRDIGASAGVIAAGFLHDVVEDTD 119
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ + I + FG V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 120 VTPEEIEQHFGLEVRGLVEGVTKLGGI------HFTNKTEAQAENLRRMFLAMASDIRVV 173
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL AL K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 174 LVKLADRLHNMRTLGALKPEKQQRIARETREIYGPLANRLGIGRFKWELEDLAFKILEPE 233
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ ++ E + ++ L L ++ + GR K LY I KM +++
Sbjct: 234 AYRDVQQQVASKRSDREERLGVTVQLLRDRLAGVGLADCEVSGRPKHLYGIWSKMERQQK 293
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+I N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 294 AFHEIYDVAALRIICPNLESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 344
>gi|227890126|ref|ZP_04007931.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
gi|227849301|gb|EEJ59387.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
Length = 749
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A++AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E + AI L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 DFSEIYDLLAVRVIVKSVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGY 310
>gi|345023332|ref|ZP_08786945.1| GTP pyrophosphokinase [Ornithinibacillus scapharcae TW25]
Length = 732
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 190/318 (59%), Gaps = 17/318 (5%)
Query: 203 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 262
+NI NL A+ +L+ + F+I+A+ AE+AH GQ R SG+ Y++H ++
Sbjct: 5 ENITIDNLIEKARSYLSEEDIH-------FIIRAYQYAEKAHEGQFRKSGEAYIIHPIQV 57
Query: 263 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 322
A +L + + +A G LHD ++D ++ + I F VA LV+GV+KL ++ ++E
Sbjct: 58 AGILVDLKMDPETIAGGFLHDVVEDTDITLEMIEEEFNKEVAMLVDGVTKLGKIKYKSKE 117
Query: 323 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 381
+A+ MF+AMA D R +LIKLADRLHNM TL LP K++ A ETLEIF
Sbjct: 118 AQ------QAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLPPEKQRIKANETLEIF 171
Query: 382 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM--VTSAIEKLEQALKD 439
PLA+RLGIST K +LE+ ++LNP Q+ + + + D+ + + I+++ L++
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKRDQRVSYIDEVIQEVSDQLEE 231
Query: 440 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 499
NI + GR K LYSI+ KM+K+ +EI+D+ +R++V + +DCY L ++H W
Sbjct: 232 LNIEAEI-SGRPKHLYSIYQKMVKQNKQFNEIYDLLAVRVLVNSIKDCYAVLGIIHTCWK 290
Query: 500 EVPGKMKDYITRPKFNGY 517
+PG+ KDYI PK N Y
Sbjct: 291 PMPGRFKDYIAMPKQNLY 308
>gi|336054243|ref|YP_004562530.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
gi|333957620|gb|AEG40428.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
Length = 746
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A++AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFADKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRAIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|58337233|ref|YP_193818.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
gi|58254550|gb|AAV42787.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
Length = 746
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 179/293 (61%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV +A+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 27 FVERAYEFANKAHAGQKRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ E N+ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKY-----EYNSHQEFL-AENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E ++ I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYISDTIKTLKKTLDELGIKYDIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|436839902|ref|YP_007324280.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432168808|emb|CCO22174.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 737
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 175/290 (60%), Gaps = 12/290 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ + RAH GQMR SG+PYL H + A LLA + + VAAGLLHDT++D +
Sbjct: 38 LIQRAYVFSARAHEGQMRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLHDTVEDTDTT 97
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAVL 349
D I FG VAD+V+GV+K+S + + SK + +A+ + M LAMA D R ++
Sbjct: 98 IDEIVELFGEEVADIVDGVTKISMM-------DFESKAIAKAENIRKMILAMAEDIRVLM 150
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TLD K+Q A+ETL+I+ PLANRLG+ K LE+LC +L PD
Sbjct: 151 VKLADRLHNMRTLDFQKSYKQQLIAQETLDIYSPLANRLGLYMVKRDLEDLCLYYLKPDV 210
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ L + V + L LK+ I + GR K +SIH KM ++ L
Sbjct: 211 YNAITDGLERQHTLGKEYVDKVLALLNDILKNNEIEGTIY-GRTKHKFSIHKKMQRQGLN 269
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DE+HDI R+IV++ +DCY L +VH +W + G+ KDYI+ PK N Y
Sbjct: 270 LDEVHDIIAFRVIVDSVKDCYSVLGLVHSMWKPISGRFKDYISIPKANMY 319
>gi|325282797|ref|YP_004255338.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
gi|324314606|gb|ADY25721.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
Length = 764
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 191/321 (59%), Gaps = 34/321 (10%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-F 289
D + +A+ A AH G +R SG+ Y+ H V A +LA +G ++T +AAGLLHDT++D
Sbjct: 24 DLIERAYDFAREAHAGVVRKSGEEYITHPVAVATILAELGMDTTSIAAGLLHDTVEDVDG 83
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS---KTVEADRLHTMFLAMAD-A 345
++++ I FG V+ +VEG +K+S+LSK + S + ++A+ L M +AM D
Sbjct: 84 VTFEVITAQFGPEVSRIVEGETKVSKLSKAGSQTAEVSDDGRDMQAENLRQMLIAMTDDL 143
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R +++KLADRLHNM T+DA+P K++R ++ET+E+F PLA+RLGI K +LE+L F++L
Sbjct: 144 RIIVVKLADRLHNMRTMDAMPPEKQKRISRETMEVFAPLAHRLGIGQVKWELEDLSFRYL 203
Query: 406 NPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIH 458
P+++ EL S+L DE +V A E L AL+D ++ + + GR K L+SI
Sbjct: 204 YPEEYAELRSRLRMQLDERDGIVKQAEESLRSALEDDLELPDWVAAIDISGRSKHLWSIF 263
Query: 459 CKMLKKKLTMDEIHDIYGLRLI-----VENEED-----------------CYQALRVVHQ 496
KM ++ +++I D+ LR+I VE E CY + +VH
Sbjct: 264 GKMRREGKALEQIFDLMALRVILTPRRVEAREGTDPERLARAEEMREKRICYHTISIVHS 323
Query: 497 LWAEVPGKMKDYITRPKFNGY 517
LW +PG+ KDYI PK NGY
Sbjct: 324 LWTPLPGRFKDYIAVPKPNGY 344
>gi|269926113|ref|YP_003322736.1| (p)ppGpp synthetase I SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
gi|269789773|gb|ACZ41914.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
Length = 721
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 188/293 (64%), Gaps = 7/293 (2%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+D + +A+ A++AH G+ R SG+P++ H V A++LA + ++ +A+ LLHDT++D
Sbjct: 19 KDLIRRAYEVADKAHEGEYRKSGEPFISHPVNVALILADLKQDAQAIASALLHDTVEDTN 78
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLA--RENNTASKTVEADRLHTMFLAMA-DAR 346
L+ D I FG V+ LV+G++KL+++ +L+ E + + +A+ L MFLAM D R
Sbjct: 79 LTLDDIETIFGPEVSRLVDGLTKLNKI-RLSPDDEKDPKEQQAQAENLRKMFLAMVEDPR 137
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
VLIKLADRLHNM T++ LP K+ A+ETLEI+ PLA RLGI ++ +LE+L FK L
Sbjct: 138 VVLIKLADRLHNMRTIEHLPRDKQLSKARETLEIYAPLAGRLGIFKFRSELEDLSFKVLY 197
Query: 407 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
PD++ E+++++ + AI+ L++AL + I + GR K LYSI+ KM +K
Sbjct: 198 PDKYREIAAQVERSGVTRGKYIEQAIDVLKKALDAEGIPAEI-TGRRKHLYSIYRKMEQK 256
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ + D+I D+ GLR+I + CY AL V+H +W +PG+ DYI PK + Y
Sbjct: 257 QRSFDQIFDVLGLRVITDEVMQCYAALGVIHSIWRPIPGEFDDYIAMPKESMY 309
>gi|256545119|ref|ZP_05472485.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
gi|256399160|gb|EEU12771.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
Length = 725
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 184/292 (63%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ AE HRGQ R SG+ Y +H + A ++ + + + AGL+HD L+D +
Sbjct: 26 NLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG + LV+GV+KL +L+ +E +A+ + M LAM+ D R +L
Sbjct: 86 TEEQMKENFGEEITFLVDGVTKLKKLNYKTKEEK------QAENIRKMVLAMSNDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P++
Sbjct: 140 IKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEE 199
Query: 410 HTELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ EL+ +K E EA + IE L++AL NI++ + GR K L+SI+ KM + K
Sbjct: 200 YYELAQMVHNKRRE--REAYINQIIETLDKALSSSNINYEI-SGRPKGLFSIYKKMSRNK 256
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V+ DCY+ L VH +W +P ++KDYI +PK NGY
Sbjct: 257 IEFNEIYDLTAVRVLVDTVADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGY 308
>gi|159037429|ref|YP_001536682.1| (p)ppGpp synthetase I SpoT/RelA [Salinispora arenicola CNS-205]
gi|157916264|gb|ABV97691.1| (p)ppGpp synthetase I, SpoT/RelA [Salinispora arenicola CNS-205]
Length = 827
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 177/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 125 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 184
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 185 MRTDFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 236
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 237 DRLHNMRTLIFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEI 296
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E EA++ +K+ LK I V GR K LYSI+ KM+ + ++I
Sbjct: 297 NRLIGEHQPQREALLRQVTKKVGTDLKAAKIRAEV-TGRPKHLYSIYQKMIVRGRDFNDI 355
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 356 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 401
>gi|418029539|ref|ZP_12668077.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354689845|gb|EHE89818.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 753
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYE------YKSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVYMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 308
>gi|187932883|ref|YP_001885230.1| GTP pyrophosphokinase [Clostridium botulinum B str. Eklund 17B]
gi|187721036|gb|ACD22257.1| RelA/SpoT family protein [Clostridium botulinum B str. Eklund 17B]
Length = 728
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 186/294 (63%), Gaps = 18/294 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA++ AE AH+ Q R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D
Sbjct: 19 EMIKKAYFFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTC 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SY+ + F +A+LV GV+KL ++ +E +AD + M LAMA D R ++
Sbjct: 79 SYESMKTIFNEEIANLVNGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D+
Sbjct: 133 IKLADRLHNMRTLKFMPKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDE 192
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ +L ++ E + +V EKL+++ D +I GR K YSI+ KM+
Sbjct: 193 YYKLVEQIAEKRVERETYINEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMIN 247
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 248 KNKSIEQIFDLTAIRILVNSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|330466917|ref|YP_004404660.1| RelA/SpoT family protein [Verrucosispora maris AB-18-032]
gi|328809888|gb|AEB44060.1| RelA/SpoT family protein [Verrucosispora maris AB-18-032]
Length = 823
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 176/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 121 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 180
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 181 MRTDFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 232
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 233 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 292
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E EA++ +K++ LK I GR K LYSI+ KM+ + ++I
Sbjct: 293 NRLIGEHQPQREALLRQVTQKVQTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 351
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 352 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 397
>gi|333371965|ref|ZP_08463903.1| GTP diphosphokinase [Desmospora sp. 8437]
gi|332975146|gb|EGK12048.1| GTP diphosphokinase [Desmospora sp. 8437]
Length = 737
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/328 (40%), Positives = 192/328 (58%), Gaps = 13/328 (3%)
Query: 195 DELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDF--VIKAFYEAERAHRGQMRASG 252
D + N + ++ G + +E L A H + +ED V KA+ A AHRGQ R SG
Sbjct: 5 DNIRKNYFNYMILGEWDMPIEELLDEA--GHYLNKEDLEQVEKAYLFAAEAHRGQTRKSG 62
Query: 253 DPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSK 312
+ Y+ H V A +LA + ++T + + +LHD ++D + + + FG VA +V+G++K
Sbjct: 63 EEYIHHPVAVAGILAELQMDATTLISAILHDVVEDTGATLETVEAEFGETVAQIVDGLTK 122
Query: 313 LSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQ 371
L Q K +TA E R MF+AMA D R +LIKLADRLHNM TL LP KR+
Sbjct: 123 LKQRMKY---KSTAEHQAENHR--KMFVAMAQDIRVILIKLADRLHNMRTLKYLPEAKRR 177
Query: 372 RFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSA 429
R AKETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + K E +
Sbjct: 178 RIAKETLEIFAPLAHRLGISTIKWELEDSSLRNLNPQQYYRIVNLMKQKRAEREKYLDEV 237
Query: 430 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 489
I + + L+ N+S + GR K +YSI+ KM+K +EI+D+ +R+IV++ DCY
Sbjct: 238 IATIRERLEGMNLSADI-SGRPKHIYSIYRKMVKDHKQFNEIYDLLAVRVIVDSIRDCYA 296
Query: 490 ALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L ++H +W +PG+ KDYI PK N Y
Sbjct: 297 VLGIIHTIWKPMPGRFKDYIAMPKANMY 324
>gi|375096049|ref|ZP_09742314.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora marina
XMU15]
gi|374656782|gb|EHR51615.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora marina
XMU15]
Length = 783
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 180/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 80 RAYDVAEELHRHQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLER 139
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 140 LGSDFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 191
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 192 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 251
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I +L + L+ I+ V GR K YSIH KM+ + +D+I
Sbjct: 252 VRLVADRAPSRDTYLRWVIGELTKQLESSRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 310
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE+ DCY A+ VVH LW +PG+ KDYI +P+F Y
Sbjct: 311 HDLVGVRILVEDVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVY 356
>gi|167570843|ref|ZP_02363717.1| GTP pyrophosphokinase [Burkholderia oklahomensis C6786]
Length = 788
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ + AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFGDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP+++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPNRYA 248
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIGAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGY
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGY 355
>gi|85716288|ref|ZP_01047262.1| RelA/SpoT protein [Nitrobacter sp. Nb-311A]
gi|85696960|gb|EAQ34844.1| RelA/SpoT protein [Nitrobacter sp. Nb-311A]
Length = 751
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 178/291 (61%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q+RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 44 EDLLNQAYVYAMKAHGEQIRASGDPYFSHPLEVAAILTGLKLDDATIVAALLHDTIEDTE 103
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L ++RE +A+ L + LA+AD R +
Sbjct: 104 ATRAEIDNMFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 157
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL+ +P RQR A+ETL+I+ PLA R+G+ + +LE+L F+ L+P+
Sbjct: 158 LIKLADRLHNMRTLEFVPPASRQRIAEETLDIYAPLAGRMGMQEMREELEDLAFQTLDPE 217
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
HT ++ +L + + ++ +L +L +K I V GR K +SI KM +K +
Sbjct: 218 AHTVVAQRLDALAERNRNLIGEIESQLATSLANKGIVARV-SGRRKQPFSIWTKMERKSV 276
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+++ + E CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 277 GFEQLSDIFGFRVVMPDVEACYRALGVVHMTWPVVPGRFKDYISTPKQNDY 327
>gi|256004313|ref|ZP_05429295.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|385778263|ref|YP_005687428.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum DSM 1313]
gi|419722157|ref|ZP_14249305.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
gi|419724255|ref|ZP_14251323.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|255991747|gb|EEU01847.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|316939943|gb|ADU73977.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
1313]
gi|380772261|gb|EIC06113.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|380781728|gb|EIC11378.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
Length = 724
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 182/279 (65%), Gaps = 12/279 (4%)
Query: 243 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 302
AH+GQ R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG
Sbjct: 34 AHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDE 93
Query: 303 VADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 361
VA+LV+GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM T
Sbjct: 94 VANLVDGVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRT 147
Query: 362 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 421
L +P K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ +
Sbjct: 148 LKYMPPEKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKR 207
Query: 422 DEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 478
E + I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R
Sbjct: 208 RER--EAYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVR 265
Query: 479 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+IV +DCY L +VH+++ +PG+ KDYI PK N Y
Sbjct: 266 VIVTTVKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMY 304
>gi|125973859|ref|YP_001037769.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum ATCC
27405]
gi|125714084|gb|ABN52576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum ATCC
27405]
Length = 724
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 182/279 (65%), Gaps = 12/279 (4%)
Query: 243 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 302
AH+GQ R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG
Sbjct: 34 AHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDE 93
Query: 303 VADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 361
VA+LV+GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM T
Sbjct: 94 VANLVDGVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRT 147
Query: 362 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 421
L +P K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ +
Sbjct: 148 LKYMPPEKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKR 207
Query: 422 DEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 478
E + I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R
Sbjct: 208 RER--EAYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVR 265
Query: 479 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+IV +DCY L +VH+++ +PG+ KDYI PK N Y
Sbjct: 266 VIVTTVKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMY 304
>gi|422845570|ref|ZP_16892280.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325684220|gb|EGD26396.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 753
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEEFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVSMMDAKRSEREDYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 308
>gi|238852662|ref|ZP_04643072.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
gi|238834808|gb|EEQ27035.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
Length = 750
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 175/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A+ AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E + AI+ L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 DFSEIYDLLAVRVIVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGY 310
>gi|167563693|ref|ZP_02356609.1| GTP pyrophosphokinase [Burkholderia oklahomensis EO147]
Length = 788
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ + AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFGDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP+++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPNRYA 248
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIGAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGY
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGY 355
>gi|385813969|ref|YP_005850362.1| PpGpp synthetase [Lactobacillus helveticus H10]
gi|323466688|gb|ADX70375.1| PpGpp synthetase [Lactobacillus helveticus H10]
Length = 749
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + + AG LHDT++D ++
Sbjct: 30 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVT 89
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 90 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 143
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 144 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 200
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 201 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 258
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 259 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPIPGRFKDYIAMPKVNGY 311
>gi|116629512|ref|YP_814684.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus gasseri ATCC 33323]
gi|282852110|ref|ZP_06261468.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
gi|311110845|ref|ZP_07712242.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
gi|420147336|ref|ZP_14654612.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
gi|116095094|gb|ABJ60246.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus gasseri ATCC 33323]
gi|282556870|gb|EFB62474.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
gi|311065999|gb|EFQ46339.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
gi|398401337|gb|EJN54839.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
Length = 750
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 175/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A+ AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E + AI+ L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 DFSEIYDLLAVRVIVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGY 310
>gi|395244306|ref|ZP_10421275.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
gi|394483401|emb|CCI82283.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
Length = 748
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 176/294 (59%), Gaps = 18/294 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A +AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFARKAHEGQFRVSGQPYIIHPTQVAGTLATLKLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DARA 347
+ I FG VA +V+GV+KLS++ SKT E AD M +AMA D R
Sbjct: 87 NEDIKEKFGKDVAFIVDGVTKLSKIQ-------YKSKTHEEYLADNHRKMLIAMAKDLRV 139
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+++KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP
Sbjct: 140 IMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNP 199
Query: 408 DQHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+Q+ + SK E E + AI+ L Q L +I + + GR K +YSI+ KM+
Sbjct: 200 EQYYRIVNLMQSKRSER--EGYIADAIQILRQTLDSLHIDYEIY-GRPKHIYSIYKKMVN 256
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K EI+D+ +R+IV++ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 257 KHKDFSEIYDLLAVRVIVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKSNGY 310
>gi|428772185|ref|YP_007163973.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium stanieri PCC 7202]
gi|428686464|gb|AFZ46324.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium stanieri PCC 7202]
Length = 747
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 181/291 (62%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDD-AFL 290
+ KAF A + H GQ R SG+ Y++H + A LL +G ++ ++AAG LHD ++D +
Sbjct: 35 LICKAFEYAYKLHEGQYRKSGEAYIIHPIAVAELLRDLGGDAEMIAAGFLHDVVEDNEDI 94
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ D+I FG+ V LVE V+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 95 TPDHIEELFGSNVRQLVEAVTKLSKF-------NFSNKTERQAENFRRMFLAMAQDIRVI 147
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TLD LP K++ A ET EIF PLANRLG+ +K +LE+L FK+L+
Sbjct: 148 VVKLADRLHNMRTLDFLPSEKQKLIATETKEIFAPLANRLGMWQFKWELEDLSFKYLHSQ 207
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ + S + E EA + I+ + + L NI+ + + GR K LY I+ KM ++K
Sbjct: 208 EYGNIRSLIAERRSDREARINQVIDIITKGLHKSNINPIEVKGRPKHLYGIYEKMQRQKK 267
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I DI LR+IV +++CYQAL VVH + +PG+ KDYI PK N Y
Sbjct: 268 EFDQIFDIAALRVIVNTKQECYQALAVVHDAFRPIPGRFKDYIGLPKPNLY 318
>gi|366164520|ref|ZP_09464275.1| (p)ppGpp synthetase I SpoT/RelA [Acetivibrio cellulolyticus CD2]
Length = 725
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 184/293 (62%), Gaps = 14/293 (4%)
Query: 231 DFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
DF + KA+ + AH GQ R SG+P+++H +E A +LA + + T + AG+LHDT++D
Sbjct: 20 DFTLLEKAYLISREAHDGQQRVSGEPFIMHPMEVANILAELELDCTAIVAGILHDTIEDT 79
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+Y+ + FG VA LV+GV+KL ++ +E +A+ L MFLAM+ D R
Sbjct: 80 TYTYEQLKDKFGEEVALLVDGVTKLGKIPYTTKEEQ------QAENLRKMFLAMSKDIRV 133
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+LIKLADRLHNM TL + K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P
Sbjct: 134 ILIKLADRLHNMRTLKYMAPEKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDP 193
Query: 408 DQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKK 464
+ +L K+ + E + IE++ LK++ + L GR K YSI+ KM ++
Sbjct: 194 KGYYDLVDKIAKKRRER--EAYIEQIVLTLKERIAELGIEVRLDGRPKHFYSIYRKMEQQ 251
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I+D++ R+IV + +DCY L +VH+++ +PG+ KDYI PK N Y
Sbjct: 252 TKTLDQIYDLFAFRIIVSSVKDCYAVLGLVHEIYKPMPGRFKDYIAMPKPNMY 304
>gi|300361857|ref|ZP_07058034.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
gi|300354476|gb|EFJ70347.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
Length = 750
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 175/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A+ AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYKFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E + AI+ L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 DFSEIYDLLAVRVIVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGY 310
>gi|402567278|ref|YP_006616623.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cepacia GG4]
gi|402248475|gb|AFQ48929.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cepacia GG4]
Length = 788
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 182/305 (59%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+LA ++K V AF+ + AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLAPEEIKE-------VKAAFHFGDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILESAQRAMTDAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YSI+ KM K+L+ ++ D+YG R++VE+ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSIYRKMRDKQLSFSQVLDVYGFRVVVESPLDCYTCIGALHSLYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|406962538|gb|EKD88859.1| hypothetical protein ACD_34C00295G0001, partial [uncultured
bacterium]
Length = 691
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 182/316 (57%), Gaps = 30/316 (9%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + A+ AE AH GQ RASG+PY+ HCV A++LA + VV+A LLHDT++D +
Sbjct: 28 EMITHAYKYAETAHEGQKRASGEPYITHCVAVAIILAEMQVQPIVVSAALLHDTVEDTKI 87
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN-------TASKTVEAD---------- 333
+ D I + FG + LV+GV+KL+ L +++R + +K EAD
Sbjct: 88 TLDDIRKEFGTEIGGLVDGVTKLTHLPRVSRADQHDAEIFEQITKDSEADDSLLDSQLAR 147
Query: 334 ---------RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 383
L FLAM D R +LIKLADRLHNM TL +P KR+R A+ETL+IF P
Sbjct: 148 DRRRDLANETLRKTFLAMGEDIRVILIKLADRLHNMRTLGFMPEKKRKRIAQETLDIFAP 207
Query: 384 LANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC-FDEAMVTSAI-EKLEQALKDKN 441
LANRLGI K +LE+L F++ NP+++ E++ L E + AI +KLE+ L D
Sbjct: 208 LANRLGIWQLKWELEDLGFRYTNPEKYKEIAQNLSETRLERDRQMQAISDKLEKLLSDAG 267
Query: 442 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 501
+ + + R K ++SI+ KM +K + + D+ G+RLIV + CY AL ++H W +
Sbjct: 268 VK-VDISARSKHIFSIYKKMQEKNKPFELVRDLRGVRLIVPDIPSCYSALGLIHTNWRPI 326
Query: 502 PGKMKDYITRPKFNGY 517
P + DYI PK N Y
Sbjct: 327 PNEFDDYIAGPKDNFY 342
>gi|148240678|ref|YP_001226065.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. WH 7803]
gi|147849217|emb|CAK24768.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. WH 7803]
Length = 797
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 168/277 (60%), Gaps = 9/277 (3%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ + + FG V
Sbjct: 100 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPEQLESHFGPEV 159
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
+LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 160 RELVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 213
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 420
AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++
Sbjct: 214 GALREEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVATKRS 273
Query: 421 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 480
E + ++ L L + + GR K LY I KM +++ EI+D+ LR++
Sbjct: 274 EREERLGVTVQLLSDRLAAAGLENCEVNGRPKHLYGIWTKMQRQQKAFHEIYDVAALRIL 333
Query: 481 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 334 TPSVEACYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 370
>gi|383827879|ref|ZP_09982968.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora
xinjiangensis XJ-54]
gi|383460532|gb|EID52622.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora
xinjiangensis XJ-54]
Length = 782
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 180/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 81 RAYDVAEELHRDQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 140
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 141 LTDEFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 192
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 193 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 252
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I +L + L++ +S V GR K YSIH KM+ + +D+I
Sbjct: 253 VRLVADRAPSRDTYLRWVIGELTRQLEESRLSAKV-EGRPKHYYSIHQKMIVRGRDLDDI 311
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++V+ DCY A+ VVH LW +PG+ KDYI +P+F Y
Sbjct: 312 HDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVY 357
>gi|298291615|ref|YP_003693554.1| (p)ppGpp synthetase I SpoT/RelA [Starkeya novella DSM 506]
gi|296928126|gb|ADH88935.1| (p)ppGpp synthetase I, SpoT/RelA [Starkeya novella DSM 506]
Length = 733
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 178/292 (60%), Gaps = 12/292 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + +A+ A RAH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 20 EALLDRAYVYAMRAHGTQKRASGDPYFSHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ + I R FG + LVEG++K+ +L ++++ +A+ L + LA+AD R +
Sbjct: 80 TTREEIDRIFGPQIGALVEGLTKIKKLDLVSKQAK------QAENLRKLLLAIADDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL +P KR R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P+
Sbjct: 134 LVKLADRLHNMRTLKWVPEEKRSRVAQETLDIYAPLAGRMGMHDMREELEDLSFRQLSPE 193
Query: 409 QHTELSSKLVECFDEA---MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + ++L + E MV + +L A+ K +S V+ GR K YSI KM +K
Sbjct: 194 AYESIRTQL-QVLKEKNGEMVAAIERELSDAVIQKGLS-AVVRGREKRPYSIWRKMEQKS 251
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ DIYG R++VE E+CY AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 252 IAFEQLSDIYGFRILVEKTEECYAALGVVHTRWPLVPGRFKDYISTPKQNDY 303
>gi|87300813|ref|ZP_01083655.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
gi|87284684|gb|EAQ76636.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
Length = 779
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 175/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + AF A + H GQ+RA+G+PY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 68 EALLASAFDFAFQLHDGQVRATGEPYIIHPVAVADLLRDIGASAGVIAAGFLHDVVEDTD 127
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ + + FGA V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 128 VTPEELEVHFGAEVRALVEGVTKLGGI------HFTNHTEAQAENLRRMFLAMASDIRVV 181
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL AL K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 182 LVKLADRLHNMRTLGALKPEKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKILEPE 241
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ E+ ++ E + + + L Q L+ + + GR K LY I KM ++
Sbjct: 242 AYGEIKQQVASKRSDREERLAATVALLMQRLQGAGLHDCEVTGRPKHLYGIWSKMQMQQK 301
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ LR++ N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 302 AFHEIFDVAALRILTPNLEGCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 352
>gi|148243334|ref|YP_001228491.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. RCC307]
gi|147851644|emb|CAK29138.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. RCC307]
Length = 773
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 174/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + AF A + HR Q+RA+G+PY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 65 EGLLASAFDFAYQLHRQQVRATGEPYIIHPVAVADLLRDIGASAAVIAAGFLHDVVEDTD 124
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+S + I FGA V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 125 VSLEEIEGHFGAEVRQLVEGVTKLGGI------HFTNRTEAQAENLRKMFLAMASDIRVV 178
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL AL K+QR A ET +I+ PLANRLGI +K +LE+L FK L PD
Sbjct: 179 LVKLADRLHNMRTLGALRPEKQQRIATETRDIYAPLANRLGIGRFKWELEDLAFKVLEPD 238
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+S ++ E + ++ L L++ + + GR K LY I KM +++
Sbjct: 239 DFRSISQQVASKRSDREERLGVTVQLLRDRLENSGVHECEVVGRPKHLYGIWSKMQRQEK 298
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ +R++ + E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 299 EFHEIFDVAAVRIVAPSVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 349
>gi|375100160|ref|ZP_09746423.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora cyanea
NA-134]
gi|374660892|gb|EHR60770.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora cyanea
NA-134]
Length = 781
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 180/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 81 RAYDVAEELHRDQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 140
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 141 LTDEFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 192
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 193 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 252
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I +L + L++ IS V GR K YSIH KM+ + +D+I
Sbjct: 253 VRLVADRAPSRDTYLRWVIGELTRQLEESRISAKV-EGRPKHYYSIHQKMIVRGRDLDDI 311
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++V+ DCY A+ VVH LW +PG+ KDY+ +P++ Y
Sbjct: 312 HDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYVAQPRYGVY 357
>gi|82701185|ref|YP_410751.1| (p)ppGpp synthetase SpoT/RelA [Nitrosospira multiformis ATCC 25196]
gi|82409250|gb|ABB73359.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Nitrosospira multiformis ATCC 25196]
Length = 715
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 184/301 (61%), Gaps = 12/301 (3%)
Query: 222 QLKHKIFREDF--VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAG 279
+L + RED + A+ ++ AH GQ R SG+PY+ H + A +L + +S +AA
Sbjct: 22 ELSSYLTREDVSELQNAYLFSQSAHSGQFRQSGEPYISHPLAVASILGKLRLDSQTLAAA 81
Query: 280 LLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMF 339
LLHD ++D +S I FG VA+LV+GVSKL ++ + + +A+ M
Sbjct: 82 LLHDVMEDTHVSKAEIGDRFGKSVAELVDGVSKLDKIEFQSHAD------AQAENFRKML 135
Query: 340 LAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 398
LAMA D R +LIKLADRLHNM TL+A+ K++R A+ET+EI+ P+ANRLG++ +L+
Sbjct: 136 LAMARDVRVILIKLADRLHNMRTLEAMRPEKKRRIARETMEIYAPIANRLGLNNIYHELQ 195
Query: 399 NLCFKHLNPDQHTELS--SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 456
+L F++L P ++ L+ ++ MVT +E ++Q LK + V GR K LYS
Sbjct: 196 DLSFRYLYPRRYRVLTNATRAARGNRREMVTKILETMKQRLKTAGLDAEV-TGREKQLYS 254
Query: 457 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 516
I+ KM++K L+ EI DIYG R+IV++ CY AL +H L+ +PGK KDYI PK NG
Sbjct: 255 IYKKMVEKHLSFSEILDIYGFRVIVKDVASCYIALGALHSLYNPIPGKFKDYIAIPKANG 314
Query: 517 Y 517
Y
Sbjct: 315 Y 315
>gi|75676113|ref|YP_318534.1| RelA/SpoT protein [Nitrobacter winogradskyi Nb-255]
gi|74420983|gb|ABA05182.1| RelA/SpoT protein [Nitrobacter winogradskyi Nb-255]
Length = 774
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 178/291 (61%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q+RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 67 EDMLNRAYVYAMKAHGEQIRASGDPYFSHPLEVAAILTGLKLDDATIVAALLHDTIEDTE 126
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L ++RE +A+ L + LA+AD R +
Sbjct: 127 ATRAEIDNMFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 180
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL+ +P RQR A+ETL+I+ PLA R+G+ + +LE+L F+ L+P+
Sbjct: 181 LVKLADRLHNMRTLEFVPPASRQRIAEETLDIYAPLAGRMGMQEMREELEDLAFQTLDPE 240
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
H ++ +L + + ++ +L +L +K I+ V GR K +SI KM +K +
Sbjct: 241 AHGVVAQRLDALAERNRNLIGEIESQLTTSLANKGIAARV-AGRRKQPFSIWTKMERKSV 299
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R++V + E CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 300 GFEQLSDIFGFRVVVPDVEACYRALGVVHMTWPVVPGRFKDYISTPKQNDY 350
>gi|297564854|ref|YP_003683826.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus silvanus DSM 9946]
gi|296849303|gb|ADH62318.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus silvanus DSM 9946]
Length = 738
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 180/299 (60%), Gaps = 24/299 (8%)
Query: 243 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 302
AH+GQ+R SG+PY++H V A +LA +G ++ + AGLLHDT++D + + I FG
Sbjct: 41 AHQGQLRKSGEPYIVHPVAVAEILAELGLDAETLMAGLLHDTVEDTEVKPEDIEERFGTA 100
Query: 303 VADLVEGVSKLSQLSKLARENNTASKTVEADR---LHTMFLAMA-DARAVLIKLADRLHN 358
V +VEG +K+S+L KLA + ++E R L MF+AMA D R +++KLADRLHN
Sbjct: 101 VRRIVEGETKVSKLYKLAHQVAEERPSLEEQRAEDLRQMFIAMAEDVRIIIVKLADRLHN 160
Query: 359 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV 418
+ TL+ +P K+ R A+ETLEI+ PLA+RLGI K +LE+L F++L P+ + +L +L
Sbjct: 161 LRTLEFMPPHKQTRIARETLEIYAPLAHRLGIGQIKWELEDLSFRYLEPEAYADLLGRLK 220
Query: 419 --ECFDEAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
EA V E LE L+ +I + GR K LYSI KM ++ +++I
Sbjct: 221 SHRAEREAAVERGKEALEAVLQRDSVLGASIQGYEVTGRTKHLYSIWKKMQREGRALEQI 280
Query: 472 HDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ LR+I+E ++ CY L +VH LW +PG++KDYI PK NGY
Sbjct: 281 YDLLALRVILEPRPTPNLEEKAMREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGY 339
>gi|153941234|ref|YP_001392337.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|170754462|ref|YP_001782694.1| GTP pyrophosphokinase [Clostridium botulinum B1 str. Okra]
gi|384463312|ref|YP_005675907.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|429246540|ref|ZP_19209858.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
gi|152937130|gb|ABS42628.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|169119674|gb|ACA43510.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum B1 str.
Okra]
gi|295320329|gb|ADG00707.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|428756456|gb|EKX79010.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
Length = 723
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLAFRYINPNE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMY 301
>gi|394989576|ref|ZP_10382409.1| (p)ppGpp synthetase I SpoT/RelA [Sulfuricella denitrificans skB26]
gi|393791076|dbj|GAB72048.1| (p)ppGpp synthetase I SpoT/RelA [Sulfuricella denitrificans skB26]
Length = 729
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 172/285 (60%), Gaps = 10/285 (3%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
A++ ++ AH GQ R SG+PY+ H + A +LA ++ + A LLHD ++D ++ I
Sbjct: 42 AYHLSDSAHAGQFRKSGEPYISHPLAVAEILADWHLDAQTLMAALLHDVVEDTAITKKEI 101
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
FG VA+LV+GVSKL ++ E T +A+ M LAMA D R +LIK+AD
Sbjct: 102 AERFGKAVAELVDGVSKLDKI-----EFQTEIHA-QAENFRKMLLAMARDVRVILIKIAD 155
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHNM TL A+ KRQR A ETLEI+ P+ANRLG+++ +LE+L F HL P++ L+
Sbjct: 156 RLHNMRTLGAMAPEKRQRIANETLEIYAPIANRLGLNSVYDELEDLSFHHLYPNRFEVLA 215
Query: 415 S--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 472
K +V +E +EQ LKD I + GR K LYSI+ KM K LT E+
Sbjct: 216 KAVKAARGNRREVVGKVLEAIEQKLKDCQIE-ATITGREKHLYSIYKKMQGKSLTFSEVF 274
Query: 473 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIYG R+IV++ CY L +HQL+ +PGK KDYI PK NGY
Sbjct: 275 DIYGFRVIVKDVPTCYLTLGSLHQLYKPIPGKFKDYIAIPKANGY 319
>gi|428174361|gb|EKX43257.1| hypothetical protein GUITHDRAFT_73270 [Guillardia theta CCMP2712]
Length = 370
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 178/287 (62%), Gaps = 10/287 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KAFY A+R H GQ+R SG+PY +H V A ++A + +S + GLLHDT++D S +
Sbjct: 4 KAFYFAQRMHEGQLRRSGEPYFIHPVGVASIIADMKLDSASIVTGLLHDTVEDTSASLEL 63
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I + FG+ VA LV+GV+K+ ++ ++E +A+ M +AMA D R +L+KLA
Sbjct: 64 IQQEFGSEVAQLVDGVTKIGKIQFTSKEEQ------QAENFRKMIVAMARDIRVILVKLA 117
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HN+ TL +P K++ A+ETL+++ PLA+RLGI K +LE+ ++L P+ + EL
Sbjct: 118 DRTHNVRTLKFVPAQKQKEVARETLDLYAPLAHRLGIFWMKTELEDTSLRYLEPEVYEEL 177
Query: 414 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT-MDE 470
+ +E A +E LE++L D+ ++ +V+ GR K YSI+ KM ++L + E
Sbjct: 178 KMMVAAKKEERQAYTNEVMEILEKSLVDQGLTNVVVTGRAKHFYSIYQKMRSRRLKHVSE 237
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ D+ R++ ++ CYQAL +VH +W VPG+ KDYI PK N Y
Sbjct: 238 VQDLIAFRILTDDLSQCYQALGIVHSMWKPVPGRFKDYIALPKPNMY 284
>gi|355673973|ref|ZP_09059325.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
WAL-17108]
gi|354814096|gb|EHE98697.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
WAL-17108]
Length = 761
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 186/289 (64%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A+ AH+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 45 MIQKAYKIADEAHKEQRRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMT 104
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + + FG+ V+ LV+GV+KL+QL+ + ++AD L MFLAMA D R ++I
Sbjct: 105 LDQLTKEFGSEVSFLVDGVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIII 159
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K L P+ +
Sbjct: 160 KLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLKPEVY 219
Query: 411 TELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L K L + E V +++++ +K+ + V GR K +SI+ KM+ + T+
Sbjct: 220 YDLVEKVDLRKDARETFVQEIVDEVKSHMKEAGVEATV-GGRVKHFFSIYKKMVNQNKTL 278
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R++VE +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 279 DQIYDLFAVRIMVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMY 327
>gi|296270031|ref|YP_003652663.1| (p)ppGpp synthetase I [Thermobispora bispora DSM 43833]
gi|296092818|gb|ADG88770.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobispora bispora DSM 43833]
Length = 786
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 175/289 (60%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ A HRGQ R SGDPY+ H + A +LA +G + + A LLHDT++D S
Sbjct: 84 LIERAYETAAYYHRGQKRKSGDPYITHPLAVATILAELGTDDETLCAALLHDTVEDTEYS 143
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ +A+ + M +AM+ D R ++I
Sbjct: 144 LEQLRADFGENIARLVDGVTKLDKVK--------YGDAAQAETVRKMIVAMSRDIRVLVI 195
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ +P KR++ ++ETLEIF PLA+RLG++T K +LE+L F L P ++
Sbjct: 196 KLADRLHNMRTMRYMPEEKRKQKSRETLEIFAPLAHRLGMNTIKWELEDLAFSMLYPKRY 255
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E++ + E + + IEK+ L++ I V+ GR K YSI+ KM+ K L
Sbjct: 256 DEIARMVFERAPRRDLYLQQVIEKVSADLREAKIKATVM-GRPKHYYSIYQKMIAKGLAF 314
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN Y
Sbjct: 315 DDIYDLVGIRVLVDTVRDCYAALGTIHARWKPVPGRFKDYIAMPKFNMY 363
>gi|335048883|ref|ZP_08541895.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
gi|333764666|gb|EGL42052.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
Length = 733
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 178/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KAF A AH+ Q R SG+ Y++H + A +LA + ++T + A LLHD ++D D
Sbjct: 32 KAFLLAADAHKDQRRVSGEWYIVHPLAVAQILADMKIDATTITASLLHDVVEDTAYMLDD 91
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I + FG VA LV+GV+KL++L +E+ + + + MFLAMA D R V+IKLA
Sbjct: 92 IEKLFGKEVAFLVDGVTKLNRLDYRTKEDQ------QINSMRKMFLAMAKDVRVVVIKLA 145
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K++R ++ETLEIF PLA+RLGI K +LE+L F++L PD++ +L
Sbjct: 146 DRLHNMRTLRFMRSDKQKRISQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDL 205
Query: 414 SSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + E +V AIE L +AL +I F + GR K YSI+ KM K + ++
Sbjct: 206 VDQMKQKRHVREEIVNEAIEVLRKALTASHIQFEI-NGRPKHFYSIYKKMKKDNRDLSQV 264
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+Y +R+IV+ +DCY L +VH LW +P + KDYI PK N Y
Sbjct: 265 YDLYAIRIIVDTVQDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNY 310
>gi|384565591|ref|ZP_10012695.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora glauca
K62]
gi|384521445|gb|EIE98640.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora glauca
K62]
Length = 781
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 180/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 81 RAYDVAEELHRDQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 140
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 141 LTEDFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 192
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 193 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 252
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I +L + L++ I+ V GR K YSIH KM+ + +D+I
Sbjct: 253 VRLVADRAPSRDTYLRWVIGELTKQLEESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 311
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++V+ DCY A+ VVH LW +PG+ KDYI +P++ Y
Sbjct: 312 HDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRYGVY 357
>gi|378549163|ref|ZP_09824379.1| hypothetical protein CCH26_03720 [Citricoccus sp. CH26A]
Length = 803
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 177/299 (59%), Gaps = 12/299 (4%)
Query: 222 QLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLL 281
+++H D +I+AF A++AH GQ R SGDPY+ H V A +LA +G T +A LL
Sbjct: 89 KVRHPKEDLDLIIRAFEVADKAHAGQRRKSGDPYITHPVAVATILAELGMTGTTLAGALL 148
Query: 282 HDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA 341
HDT++D S + + R FG VA LV+GV+KL ++ +A+ + M LA
Sbjct: 149 HDTVEDTSYSLEQLRRDFGDEVAHLVDGVTKLDKVK--------FGDAAQAETVRKMVLA 200
Query: 342 MA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENL 400
MA D R ++IKLADRLHN T + R AKETLEI+ PLA+RLG++T K +LE+L
Sbjct: 201 MADDVRVLVIKLADRLHNARTWRYVAPESSARKAKETLEIYAPLAHRLGMNTIKWELEDL 260
Query: 401 CFKHLNPDQHTELSSKLVECFDEAMVTSAI--EKLEQALKDKNISFLVLCGRHKSLYSIH 458
F L P + E+ + E E A ++E+ LK+ I V+ GR K YSI+
Sbjct: 261 SFAALYPKVYAEIVRLVGERTPEREKNLAALRGQIERDLKEARIR-AVVTGRPKHFYSIY 319
Query: 459 CKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
KM+ + DEIHD+ G+R++V++ DCY AL V+H W+ +PG+ KDYI PK N Y
Sbjct: 320 QKMIVRGKDFDEIHDLMGVRVLVDSVRDCYGALGVLHSKWSPLPGRFKDYIAMPKLNMY 378
>gi|296444869|ref|ZP_06886831.1| (p)ppGpp synthetase I, SpoT/RelA [Methylosinus trichosporium OB3b]
gi|296257537|gb|EFH04602.1| (p)ppGpp synthetase I, SpoT/RelA [Methylosinus trichosporium OB3b]
Length = 737
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 177/292 (60%), Gaps = 12/292 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A +LHDT++D
Sbjct: 20 EDLLNRAYVYAMKAHGQQTRASGDPYFSHPLEVAAILTDLKLDDATIVAAVLHDTVEDTS 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ D I R FG + LV+G++K+ +L +++ K + + + LA++ D R +
Sbjct: 80 STLDEIERLFGPQIRKLVDGLTKIEKLDLVSK------KAAQGENFRKLLLAVSEDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL +PL KR R A+ETL+I+ PLA R+G+ + +LE L F+HL P+
Sbjct: 134 LVKLADRLHNMRTLHFVPLEKRARIAQETLDIYAPLAGRMGMQRLREELEGLAFRHLTPE 193
Query: 409 QHTELSSKLVECFDEAMVTSAIEKLEQALKD---KNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + ++L E A I+++E+ L + K + GR K+ +SI KM +K
Sbjct: 194 AYLAIETRLHEL--RAKNGRIIKRIEKELTEEFSKRGIHAAVTGRQKAPFSIWRKMERKS 251
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ DI+G R+IV+ EDCY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 252 IAFEQLSDIFGFRIIVDEVEDCYRALGIVHTKWPSVPGRFKDYISTPKQNDY 303
>gi|254456187|ref|ZP_05069616.1| RelA/SpoT family protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083189|gb|EDZ60615.1| RelA/SpoT family protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 581
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 190/302 (62%), Gaps = 13/302 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A +AH+ Q RASGDPY +H +E A +L + +S + GLLHDT++D F +YD
Sbjct: 25 KAYNFAVKAHQNQKRASGDPYSVHPIEVANILTDLKLDSATITTGLLHDTIEDTFATYDT 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I FG VA+LV+GV+K+S NTA + + + LA + D R +L+K+A
Sbjct: 85 IKTEFGDEVAELVDGVTKISVFE------NTAGANSKVENFRKLILATSKDIRVLLVKIA 138
Query: 354 DRLHNMMTLDALPL-CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 412
DRLHNM T+ A+P KR+R A+ET+EI+ PLA+R+G+ + +LE+L F+ LN D
Sbjct: 139 DRLHNMRTIKAIPKEDKRKRIAQETMEIYAPLADRMGMHRIRDELEDLSFEILNNDARKL 198
Query: 413 LSSKLVEC-FDEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
+ +L E D+ + + +L + L D +I+ + GR K+ +SI K+ KK++++++
Sbjct: 199 IKIRLDEIKLDKKDIFEELSFELSEILNDNHIN-AEIYGREKTPFSIWRKVQKKRVSLEQ 257
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY--IFSQVVLSYER 528
+ DI G R+I++N +DCY+ L + H+ W +PGK KDYI+ PK NGY I + V+ S ++
Sbjct: 258 VTDIIGFRIILKNIDDCYKTLGIFHKKWNCIPGKFKDYISSPKINGYKSIHTAVIGSNKK 317
Query: 529 NI 530
I
Sbjct: 318 PI 319
>gi|334119644|ref|ZP_08493729.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
gi|333457806|gb|EGK86427.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
Length = 758
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 178/292 (60%), Gaps = 11/292 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+ + +AF A H GQ R SG+PY+ H V A +L +G N+ ++AAG LHD ++D
Sbjct: 44 DSLICRAFEFARDLHEGQYRKSGEPYICHPVAVAGILRYMGGNNVMIAAGFLHDIVEDTD 103
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARA 347
++ + I + FGA V LVEGV+KLS+ N +SKT A+ MFLAMA D R
Sbjct: 104 ITLEEIEQRFGAEVRQLVEGVTKLSKF-------NFSSKTERLAENFRRMFLAMAKDIRV 156
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+++KLADRLHNM TL+ L K++ A ET +IF PLANRLGI +K +LE+L FK+L P
Sbjct: 157 IVVKLADRLHNMRTLEHLSEEKQRSIALETRDIFAPLANRLGIGRFKWELEDLAFKYLEP 216
Query: 408 DQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + E+ + E E + + L + L + I + GR K LY I+ KM +++
Sbjct: 217 EAYREIQELVAEKRADRETQLAEVTDCLRERLDNLGIKCYEVSGRPKHLYGIYGKMQRRQ 276
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++++DI +R+IVE+ +DCY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 277 KGFNQVYDIAAVRIIVESNDDCYRALAIVHDSFRPIPGRFKDYIGLPKANRY 328
>gi|218132940|ref|ZP_03461744.1| hypothetical protein BACPEC_00801 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991813|gb|EEC57817.1| RelA/SpoT family protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 776
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 188/286 (65%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A +AH GQ R SG+PY++H + A++LA + + + AGLLHD ++D ++ D
Sbjct: 67 KAYKIATKAHEGQFRKSGEPYIIHPICVAIILAELELDKESIIAGLLHDVVEDTVMTTDD 126
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I R FGA VA LV+GV+KL+QL+ E++ ++A+ L MFLAMA D R ++IKLA
Sbjct: 127 ITREFGAEVALLVDGVTKLTQLN---YEHDKIE--IQAENLRKMFLAMAKDIRVIMIKLA 181
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ K+ ++ET+EI+ P+A+RLGIS KV+L++L ++L PD + +L
Sbjct: 182 DRLHNMRTMQYQSPAKQIEKSRETMEIYAPIAHRLGISKIKVELDDLSMQYLMPDVYNDL 241
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + EA + S I++++ +++ I + GR K +SI+ KM+ + T+D+I
Sbjct: 242 VKQINMNKENREAFIKSIIKEVKMHIENAGIEAEI-DGRVKHFFSIYRKMVNQNKTLDQI 300
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ +R+ VE +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 301 YDLFAVRIKVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKENMY 346
>gi|372487190|ref|YP_005026755.1| RelA/SpoT family (p)ppGpp synthetase [Dechlorosoma suillum PS]
gi|359353743|gb|AEV24914.1| (p)ppGpp synthetase, RelA/SpoT family [Dechlorosoma suillum PS]
Length = 743
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 179/288 (62%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+ +AF E AHRGQ R SG+PY+ H + A +A +ST + A LLHDT++D +S
Sbjct: 59 IKEAFAFGEAAHRGQKRLSGEPYITHPLAVAGAIAEWRLDSTAIIAALLHDTMEDTGISK 118
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + FG GVADLV+G+SKL ++ ++ + +A+ M LAMA D R +LIK
Sbjct: 119 EELTERFGKGVADLVDGLSKLDKI------EFSSYQEAQAENFRKMLLAMAKDLRVILIK 172
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
L DRLHNM TL + KR+R A ETLEI+ P+ANRLG++T +L++L FKH +P ++
Sbjct: 173 LTDRLHNMQTLGCMRPDKRRRIALETLEIYAPIANRLGLNTVYRELQDLSFKHTHPMRYQ 232
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L ++ +++ ++ ++ ++D I V GR KSLYSI+ KM++K+L+
Sbjct: 233 VLLKAVMAARGNRREVLSKILDGVQSKMRDSGIEAQVF-GREKSLYSIYRKMVEKRLSFS 291
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ DIYG R++V++ CY L +H L+ +PGK KDYI PK NGY
Sbjct: 292 QVLDIYGFRVVVKDVPSCYLGLGALHALYKPLPGKFKDYIAIPKANGY 339
>gi|168179553|ref|ZP_02614217.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
gi|182669850|gb|EDT81826.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
Length = 723
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMY 301
>gi|302866778|ref|YP_003835415.1| RelA/SpoT family protein [Micromonospora aurantiaca ATCC 27029]
gi|302569637|gb|ADL45839.1| RelA/SpoT family protein [Micromonospora aurantiaca ATCC 27029]
Length = 823
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 121 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 180
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 181 MRADFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 232
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 233 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 292
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E EA++ +K+ LK I GR K LYSI+ KM+ + ++I
Sbjct: 293 NRLIGEHQPQREALLRQVTQKVSTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 351
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 352 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 397
>gi|315503193|ref|YP_004082080.1| (p)ppGpp synthetase I SpoT/RelA [Micromonospora sp. L5]
gi|315409812|gb|ADU07929.1| (p)ppGpp synthetase I, SpoT/RelA [Micromonospora sp. L5]
Length = 823
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 121 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 180
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 181 MRADFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 232
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 233 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 292
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E EA++ +K+ LK I GR K LYSI+ KM+ + ++I
Sbjct: 293 NRLIGEHQPQREALLRQVTQKVSTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 351
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 352 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 397
>gi|253699682|ref|YP_003020871.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M21]
gi|251774532|gb|ACT17113.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
Length = 716
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLRLDLAAVVTGLLHDTVEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + FGA VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 THEELESLFGAEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQL 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L+ K+ + E+ V + E +++ L++ I V GR K LYSI+ KM + +
Sbjct: 195 YYDLAGKVAKKKQERESYVATVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVD 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI+D+ +R+ VE+ +CY+ L ++H W +PG+ KDYI PK N Y
Sbjct: 254 IDEIYDLIAIRVSVEDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMY 303
>gi|381165523|ref|ZP_09874753.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Saccharomonospora azurea NA-128]
gi|379257428|gb|EHY91354.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Saccharomonospora azurea NA-128]
Length = 781
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 178/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 81 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSVEQ 140
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 141 LTNEFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 192
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 193 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 252
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I +L L + I+ V GR K YSIH KM+ + +D+I
Sbjct: 253 VRLVADRAPSRDTYLRWVIGELTNQLGESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 311
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE DCY A+ VVH LW +PG+ KDYI +P+F Y
Sbjct: 312 HDLVGVRILVEEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVY 357
>gi|148381010|ref|YP_001255551.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|153931540|ref|YP_001385381.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 19397]
gi|153936238|ref|YP_001388788.1| GTP pyrophosphokinase [Clostridium botulinum A str. Hall]
gi|226950488|ref|YP_002805579.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|387819316|ref|YP_005679663.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
gi|148290494|emb|CAL84622.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|152927584|gb|ABS33084.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
ATCC 19397]
gi|152932152|gb|ABS37651.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
Hall]
gi|226842731|gb|ACO85397.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|322807360|emb|CBZ04934.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
Length = 723
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMY 301
>gi|407799653|ref|ZP_11146531.1| (p)ppGpp synthetase I SpoT/RelA [Oceaniovalibus guishaninsula
JLT2003]
gi|407058130|gb|EKE44088.1| (p)ppGpp synthetase I SpoT/RelA [Oceaniovalibus guishaninsula
JLT2003]
Length = 714
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 181/306 (59%), Gaps = 12/306 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
+ +A + H D V +A++ R H GQ R SG+PY H V A +LA +
Sbjct: 15 DLIARIRAYHPTADFDLVRRAYHYGARMHEGQFRHSGEPYFTHPVAVAGILARQRLDDAT 74
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+ LLHDT++D SY+ + R FG +ADLV GV+KL+QL T++++ +A+
Sbjct: 75 IVTALLHDTVEDTRASYEDVERLFGTEIADLVNGVTKLTQL------QLTSTRSKQAENF 128
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+F+AM+ D R +L+KLADRLHNM T++++ +QR A+ET++IF PLA R+G+ +
Sbjct: 129 RKLFIAMSRDLRVILVKLADRLHNMRTIESMRPEGQQRKARETMDIFAPLAGRMGMQWMR 188
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALK---DKNISFLVLCGRH 451
+LE+L FK LNPD + + ++ EA + I+K+ ++ D+ + GR
Sbjct: 189 EELEDLAFKVLNPDGRNSIIRRFIKLQREA--GNVIDKITADIRLELDRAGIEGEVYGRA 246
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K +SI KM +KK+ + DIYG R+IV E +CY L V+HQ W VP + KDYI++
Sbjct: 247 KKPFSIWRKMEEKKIGFSRLSDIYGFRIIVGTESECYAVLGVIHQRWRAVPDRFKDYISQ 306
Query: 512 PKFNGY 517
PK NGY
Sbjct: 307 PKSNGY 312
>gi|313150268|dbj|BAJ39892.1| ppGpp synthetase [Actinoplanes teichomyceticus]
Length = 821
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 176/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KAF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 119 KAFDVAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQ 178
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FGA VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 179 MRNDFGAEVALLVDGVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 230
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 231 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 290
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E EA++ +++ LK I V GR K LYSI+ KM+ + ++I
Sbjct: 291 NRLIGEHQPQREALLRQVTNRVQLDLKSAKIKAEV-TGRPKHLYSIYQKMIVRGRDFNDI 349
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 350 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 395
>gi|116072003|ref|ZP_01469271.1| metal dependent phosphohydrolase [Synechococcus sp. BL107]
gi|116065626|gb|EAU71384.1| metal dependent phosphohydrolase [Synechococcus sp. BL107]
Length = 776
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 174/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E ++ AF + + H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 66 EALLVSAFDFSFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTD 125
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+S + I FG+ V +LVEGV+KL + R +A+ L MF+AMA D R V
Sbjct: 126 VSLEEIQAHFGSEVRELVEGVTKLGGIHFNDRTE------AQAENLRRMFMAMASDIRVV 179
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADR+HNM T+ AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 180 LVKLADRVHNMRTIGALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPE 239
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
E+ ++ E + + L + L+ + + GR K LY I KM +++
Sbjct: 240 AFREIQQEVATKRSEREQRLGVTVGLLNERLQRAGLEGCEVSGRPKHLYGIWSKMERQQK 299
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+ + E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 300 AFHEIYDVAALRITTPSVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|418463632|ref|ZP_13034628.1| (p)ppGpp synthetase, RelA/SpoT family protein [Saccharomonospora
azurea SZMC 14600]
gi|359732115|gb|EHK81136.1| (p)ppGpp synthetase, RelA/SpoT family protein [Saccharomonospora
azurea SZMC 14600]
Length = 774
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 178/286 (62%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 74 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSVEQ 133
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 134 LTNEFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 185
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 186 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 245
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I +L L + I+ V GR K YSIH KM+ + +D+I
Sbjct: 246 VRLVADRAPSRDTYLRWVIGELTNQLGESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 304
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE DCY A+ VVH LW +PG+ KDYI +P+F Y
Sbjct: 305 HDLVGVRILVEEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVY 350
>gi|212638570|ref|YP_002315090.1| GTP pyrophosphokinase [Anoxybacillus flavithermus WK1]
gi|212560050|gb|ACJ33105.1| GTP pyrophosphokinase (ppGpp synthetase) [Anoxybacillus
flavithermus WK1]
Length = 732
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 177/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ +A+ A+ AHR Q R SG+PY++H ++ A +L + + +AAG LHD ++D ++
Sbjct: 27 FIERAYEFAKEAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHDVVEDTHVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + R FG VA LV+GV+KL ++ + E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGKEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E + I+++ L + I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEMRARLLEVGIQAEI-SGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IVE+ +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRIIVESIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|197119579|ref|YP_002140006.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
bemidjiensis Bem]
gi|197088939|gb|ACH40210.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter bemidjiensis Bem]
Length = 716
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLRLDLPAVVTGLLHDTVEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + FGA VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 THEELESLFGAEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQL 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L+ K+ + E+ V + E +++ L++ I V GR K LYSI+ KM + +
Sbjct: 195 YYDLAGKVAKKKQERESYVATVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVD 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI+D+ +R+ VE+ +CY+ L ++H W +PG+ KDYI PK N Y
Sbjct: 254 IDEIYDLIAIRVSVEDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMY 303
>gi|170758445|ref|YP_001788379.1| GTP pyrophosphokinase [Clostridium botulinum A3 str. Loch Maree]
gi|169405434|gb|ACA53845.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A3 str.
Loch Maree]
Length = 723
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRAGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMY 301
>gi|168181749|ref|ZP_02616413.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|237796515|ref|YP_002864067.1| GTP pyrophosphokinase [Clostridium botulinum Ba4 str. 657]
gi|182675126|gb|EDT87087.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|229261873|gb|ACQ52906.1| RelA/SpoT family protein [Clostridium botulinum Ba4 str. 657]
Length = 723
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRAGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMY 301
>gi|116074036|ref|ZP_01471298.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9916]
gi|116069341|gb|EAU75093.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9916]
Length = 778
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 167/277 (60%), Gaps = 9/277 (3%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D L+ D + FG V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDLTADQLEEHFGPEV 139
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RALVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 420
+L K++R A+ET EI+ PLANRLGI +K +LE+L FK L P+ E++ ++
Sbjct: 194 GSLKREKQERIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREITEEVATKRS 253
Query: 421 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 480
E + ++ L L + + GR K LY I KM +++ EI+D+ +R+I
Sbjct: 254 EREERLGVTLKLLGDRLAAVGLESCEVNGRPKHLYGIWSKMQRQQKAFHEIYDVAAVRII 313
Query: 481 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 314 TPNLETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|424826931|ref|ZP_18251766.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
gi|365980468|gb|EHN16498.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
Length = 723
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ E E + + L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIVSNLQQNLKKAGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMY 301
>gi|212696222|ref|ZP_03304350.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
gi|212676851|gb|EEB36458.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
Length = 726
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 182/292 (62%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ AE HRGQ R SG+ Y +H + A ++ + + + AGL+HD L+D +
Sbjct: 26 DLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S D + FG + LV+GV+KL +L+ RE +A+ + M LAM+ D R +L
Sbjct: 86 SKDQMRDLFGEEITFLVDGVTKLKKLNYKTREEK------QAENIRKMVLAMSNDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P++
Sbjct: 140 IKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEE 199
Query: 410 HTELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ EL+ +K E E + IE L+++L I++ + GR K L+SI+ KM + K
Sbjct: 200 YYELAQMVHNKRRE--RENYINEIIETLDKSLSSSKINYEI-SGRPKGLFSIYKKMSRNK 256
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V+ DCY+ L VH +W +P ++KDYI +PK NGY
Sbjct: 257 IEFNEIYDLTAVRVLVDTVADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGY 308
>gi|83719914|ref|YP_442129.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
gi|167581000|ref|ZP_02373874.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis TXDOH]
gi|167619077|ref|ZP_02387708.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis Bt4]
gi|257138317|ref|ZP_05586579.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
gi|83653739|gb|ABC37802.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
Length = 789
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGY
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGY 355
>gi|204789670|gb|ACI02046.1| hypothetical protein [uncultured bacterium]
Length = 742
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 185/289 (64%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A +AH Q+R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 29 LIEKAYNIASKAHAKQLRKSGEPYIVHPLCVAIILADLQLDKESIVAGLLHDVVEDTVMT 88
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I R FG VA +V+GV+KL ++ + N +A+ L MF+AMA D R +++
Sbjct: 89 DEDIEREFGPDVALIVDGVTKLEKI-----KYNNDKLEYQAENLRRMFIAMAKDIRVIMV 143
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL P K++ AKET++I+ PLA RLGIS KV+L++L K+L P+ +
Sbjct: 144 KLADRLHNMRTLSHQPEAKQKEIAKETMDIYAPLAQRLGISKVKVELDDLSLKYLEPEVY 203
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L K+ + EA V ++++ +A+ I + GR K +SI+ KML + ++
Sbjct: 204 RDLVDKIAVRKSVREAFVQDIVDEVAEAISAAGIKAQI-DGRVKHFFSIYRKMLNQDKSL 262
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IV++ +DCY AL ++H+++ +PG+ KDYI PK N Y
Sbjct: 263 DQIYDLFAVRIIVDSIKDCYAALGIIHEIYKPIPGRFKDYIAMPKPNMY 311
>gi|256619448|ref|ZP_05476294.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
gi|256598975|gb|EEU18151.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
Length = 737
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG +A LV+GV+KL ++ + E A+ M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQL------AENYRKMLLAMAQDLRVIM 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + + D EA V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMY 308
>gi|421836333|ref|ZP_16270846.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
gi|409741806|gb|EKN41461.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
Length = 465
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMY 301
>gi|422558365|ref|ZP_16634105.1| GTP diphosphokinase [Propionibacterium acnes HL025PA2]
gi|328753279|gb|EGF66895.1| GTP diphosphokinase [Propionibacterium acnes HL025PA2]
Length = 774
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|227903817|ref|ZP_04021622.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
gi|227868704|gb|EEJ76125.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
Length = 749
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 179/293 (61%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV +A+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 30 FVERAYEFANKAHAGQKRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVT 89
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG V+ +V+GV+KL++ E N+ + + A+ M +AMA D R +++
Sbjct: 90 NDELKEKFGEDVSFIVDGVTKLNKY-----EYNSHQEFL-AENHRKMLIAMAKDLRVIMV 143
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 144 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 200
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E ++ I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 201 -EAYYRIVNLMDVKRSQREKYISDTIKTLKKTLDELGIKYDIY-GRPKHIYSIYKKMVNK 258
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 259 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 311
>gi|365974032|ref|YP_004955591.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn33]
gi|422427939|ref|ZP_16504850.1| GTP diphosphokinase [Propionibacterium acnes HL087PA1]
gi|422433331|ref|ZP_16510199.1| GTP diphosphokinase [Propionibacterium acnes HL059PA2]
gi|422435890|ref|ZP_16512747.1| GTP diphosphokinase [Propionibacterium acnes HL083PA2]
gi|422443695|ref|ZP_16520493.1| GTP diphosphokinase [Propionibacterium acnes HL002PA1]
gi|422445869|ref|ZP_16522616.1| GTP diphosphokinase [Propionibacterium acnes HL027PA1]
gi|422454300|ref|ZP_16530980.1| GTP diphosphokinase [Propionibacterium acnes HL087PA3]
gi|422510504|ref|ZP_16586650.1| GTP diphosphokinase [Propionibacterium acnes HL059PA1]
gi|422539308|ref|ZP_16615181.1| GTP diphosphokinase [Propionibacterium acnes HL013PA1]
gi|422547962|ref|ZP_16623778.1| GTP diphosphokinase [Propionibacterium acnes HL050PA3]
gi|422562921|ref|ZP_16638598.1| GTP diphosphokinase [Propionibacterium acnes HL046PA1]
gi|422570085|ref|ZP_16645692.1| GTP diphosphokinase [Propionibacterium acnes HL067PA1]
gi|422578538|ref|ZP_16654062.1| GTP diphosphokinase [Propionibacterium acnes HL005PA4]
gi|313764313|gb|EFS35677.1| GTP diphosphokinase [Propionibacterium acnes HL013PA1]
gi|313815851|gb|EFS53565.1| GTP diphosphokinase [Propionibacterium acnes HL059PA1]
gi|314915303|gb|EFS79134.1| GTP diphosphokinase [Propionibacterium acnes HL005PA4]
gi|314920223|gb|EFS84054.1| GTP diphosphokinase [Propionibacterium acnes HL050PA3]
gi|314931746|gb|EFS95577.1| GTP diphosphokinase [Propionibacterium acnes HL067PA1]
gi|314955647|gb|EFT00049.1| GTP diphosphokinase [Propionibacterium acnes HL027PA1]
gi|314958043|gb|EFT02146.1| GTP diphosphokinase [Propionibacterium acnes HL002PA1]
gi|315098675|gb|EFT70651.1| GTP diphosphokinase [Propionibacterium acnes HL059PA2]
gi|315101322|gb|EFT73298.1| GTP diphosphokinase [Propionibacterium acnes HL046PA1]
gi|327450641|gb|EGE97295.1| GTP diphosphokinase [Propionibacterium acnes HL087PA3]
gi|327454021|gb|EGF00676.1| GTP diphosphokinase [Propionibacterium acnes HL083PA2]
gi|328754059|gb|EGF67675.1| GTP diphosphokinase [Propionibacterium acnes HL087PA1]
gi|365744031|gb|AEW79228.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn33]
Length = 774
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|167837498|ref|ZP_02464381.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
gi|424903250|ref|ZP_18326763.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
gi|390931123|gb|EIP88524.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
Length = 789
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGY
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGY 355
>gi|379012030|ref|YP_005269842.1| GTP pyrophosphokinase RelA [Acetobacterium woodii DSM 1030]
gi|375302819|gb|AFA48953.1| GTP pyrophosphokinase RelA [Acetobacterium woodii DSM 1030]
Length = 723
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A+ AH+ Q R SG+ Y++H V A +LA + ++ + A +LHD ++D
Sbjct: 27 EMIYKAYNLAKEAHKDQKRLSGEDYVIHPVSVAYILAEMQMDTETIVAAILHDVIEDTIY 86
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SYDYI F +A+LVEGV+K+ ++ ++E + +A+ L M LAM+ D R +L
Sbjct: 87 SYDYIKEEFNETIANLVEGVTKIGRIGFQSKEES------QAENLRKMILAMSKDIRVIL 140
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKL DRLHNM TL+ + K+ AKETL+I+ PLANRLGIST K +LE+L K+L+PD
Sbjct: 141 IKLVDRLHNMRTLEYMRETKQIEKAKETLDIYAPLANRLGISTIKWELEDLALKYLDPDG 200
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + EA + I L + + +K + + GR K YSI+ KM + +
Sbjct: 201 YYDLVHKIKVKKSAREAYIADVIAVLAKEI-EKVGTHAEIYGRSKHFYSIYRKMKSQNRS 259
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV++ +DCY L +VH W +PG+ KDYI PK N Y
Sbjct: 260 FDEIYDLIAVRVIVDSLKDCYGVLGIVHSQWTPIPGRFKDYIAMPKPNLY 309
>gi|422485252|ref|ZP_16561614.1| GTP diphosphokinase [Propionibacterium acnes HL043PA2]
gi|327445780|gb|EGE92434.1| GTP diphosphokinase [Propionibacterium acnes HL043PA2]
Length = 774
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|428201543|ref|YP_007080132.1| RelA/SpoT family (p)ppGpp synthetase [Pleurocapsa sp. PCC 7327]
gi|427978975|gb|AFY76575.1| (p)ppGpp synthetase, RelA/SpoT family [Pleurocapsa sp. PCC 7327]
Length = 765
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 176/290 (60%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D ++
Sbjct: 48 LICRAFNFAYELHEGQYRKSGEPYIAHPIAVASLLRDLGGDKAMIAAGFLHDVVEDTDVT 107
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 108 LEEIEERFGAEVRQLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVII 160
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ L K++ A ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 161 VKLADRLHNMRTLEHLKPEKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYLEPEA 220
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + S + E EA + E L + L I+ + GR K LY I+ KM +++
Sbjct: 221 YRAVQSLVAEKRTDREARLEKVSEMLRERLTSLGINVREIKGRPKHLYGIYQKMQRQQKE 280
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI LR+IV+++++CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 281 FHEIYDIAALRIIVDSKDECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 330
>gi|53720172|ref|YP_109158.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei K96243]
gi|53726018|ref|YP_103668.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei ATCC 23344]
gi|67643935|ref|ZP_00442678.1| GTP pyrophosphokinase [Burkholderia mallei GB8 horse 4]
gi|76811711|ref|YP_334422.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei 1710b]
gi|121601566|ref|YP_992160.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei SAVP1]
gi|124383450|ref|YP_001028605.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei NCTC 10229]
gi|126439987|ref|YP_001059962.1| GTP pyrophosphokinase [Burkholderia pseudomallei 668]
gi|126449677|ref|YP_001081496.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei NCTC 10247]
gi|126452109|ref|YP_001067254.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106a]
gi|134280234|ref|ZP_01766945.1| GTP pyrophosphokinase [Burkholderia pseudomallei 305]
gi|166998290|ref|ZP_02264150.1| GTP pyrophosphokinase [Burkholderia mallei PRL-20]
gi|167720739|ref|ZP_02403975.1| GTP pyrophosphokinase [Burkholderia pseudomallei DM98]
gi|167739720|ref|ZP_02412494.1| GTP pyrophosphokinase [Burkholderia pseudomallei 14]
gi|167816924|ref|ZP_02448604.1| GTP pyrophosphokinase [Burkholderia pseudomallei 91]
gi|167825327|ref|ZP_02456798.1| GTP pyrophosphokinase [Burkholderia pseudomallei 9]
gi|167846829|ref|ZP_02472337.1| GTP pyrophosphokinase [Burkholderia pseudomallei B7210]
gi|167895420|ref|ZP_02482822.1| GTP pyrophosphokinase [Burkholderia pseudomallei 7894]
gi|167903805|ref|ZP_02491010.1| GTP pyrophosphokinase [Burkholderia pseudomallei NCTC 13177]
gi|167912071|ref|ZP_02499162.1| GTP pyrophosphokinase [Burkholderia pseudomallei 112]
gi|167920045|ref|ZP_02507136.1| GTP pyrophosphokinase [Burkholderia pseudomallei BCC215]
gi|226193783|ref|ZP_03789385.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pakistan 9]
gi|237813378|ref|YP_002897829.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Burkholderia
pseudomallei MSHR346]
gi|242318111|ref|ZP_04817127.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106b]
gi|254181032|ref|ZP_04887630.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1655]
gi|254191878|ref|ZP_04898381.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pasteur 52237]
gi|254196051|ref|ZP_04902476.1| GTP pyrophosphokinase [Burkholderia pseudomallei S13]
gi|254202366|ref|ZP_04908729.1| GTP pyrophosphokinase [Burkholderia mallei FMH]
gi|254207700|ref|ZP_04914050.1| GTP pyrophosphokinase [Burkholderia mallei JHU]
gi|254298848|ref|ZP_04966298.1| GTP pyrophosphokinase [Burkholderia pseudomallei 406e]
gi|254356400|ref|ZP_04972676.1| GTP pyrophosphokinase [Burkholderia mallei 2002721280]
gi|386860855|ref|YP_006273804.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei 1026b]
gi|403519675|ref|YP_006653809.1| GTP pyrophosphokinase [Burkholderia pseudomallei BPC006]
gi|418398307|ref|ZP_12971896.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354a]
gi|418533325|ref|ZP_13099192.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026a]
gi|418540114|ref|ZP_13105677.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258a]
gi|418546364|ref|ZP_13111584.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258b]
gi|418557416|ref|ZP_13122011.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354e]
gi|52210586|emb|CAH36569.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei K96243]
gi|52429441|gb|AAU50034.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 23344]
gi|76581164|gb|ABA50639.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1710b]
gi|121230376|gb|ABM52894.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei SAVP1]
gi|124291470|gb|ABN00739.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei NCTC 10229]
gi|126219480|gb|ABN82986.1| GTP diphosphokinase [Burkholderia pseudomallei 668]
gi|126225751|gb|ABN89291.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106a]
gi|126242547|gb|ABO05640.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei NCTC 10247]
gi|134248241|gb|EBA48324.1| GTP pyrophosphokinase [Burkholderia pseudomallei 305]
gi|147746613|gb|EDK53690.1| GTP pyrophosphokinase [Burkholderia mallei FMH]
gi|147751594|gb|EDK58661.1| GTP pyrophosphokinase [Burkholderia mallei JHU]
gi|148025397|gb|EDK83551.1| GTP pyrophosphokinase [Burkholderia mallei 2002721280]
gi|157809170|gb|EDO86340.1| GTP pyrophosphokinase [Burkholderia pseudomallei 406e]
gi|157939549|gb|EDO95219.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pasteur 52237]
gi|169652795|gb|EDS85488.1| GTP pyrophosphokinase [Burkholderia pseudomallei S13]
gi|184211571|gb|EDU08614.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1655]
gi|225934088|gb|EEH30073.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pakistan 9]
gi|237505941|gb|ACQ98259.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Burkholderia
pseudomallei MSHR346]
gi|238525404|gb|EEP88832.1| GTP pyrophosphokinase [Burkholderia mallei GB8 horse 4]
gi|242141350|gb|EES27752.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106b]
gi|243065365|gb|EES47551.1| GTP pyrophosphokinase [Burkholderia mallei PRL-20]
gi|385361360|gb|EIF67245.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026a]
gi|385362697|gb|EIF68504.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258a]
gi|385364782|gb|EIF70489.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258b]
gi|385365058|gb|EIF70755.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354e]
gi|385366377|gb|EIF72000.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354a]
gi|385657983|gb|AFI65406.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026b]
gi|403075318|gb|AFR16898.1| GTP pyrophosphokinase [Burkholderia pseudomallei BPC006]
Length = 789
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGY
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGY 355
>gi|50842646|ref|YP_055873.1| GTP pyrophosphokinase [Propionibacterium acnes KPA171202]
gi|289425156|ref|ZP_06426933.1| GTP diphosphokinase [Propionibacterium acnes SK187]
gi|335055041|ref|ZP_08547835.1| GTP diphosphokinase [Propionibacterium sp. 434-HC2]
gi|342211740|ref|ZP_08704465.1| GTP diphosphokinase [Propionibacterium sp. CC003-HC2]
gi|387503540|ref|YP_005944769.1| GTP pyrophosphokinase [Propionibacterium acnes 6609]
gi|422438217|ref|ZP_16515061.1| GTP diphosphokinase [Propionibacterium acnes HL092PA1]
gi|422457221|ref|ZP_16533883.1| GTP diphosphokinase [Propionibacterium acnes HL030PA1]
gi|422493438|ref|ZP_16569738.1| GTP diphosphokinase [Propionibacterium acnes HL086PA1]
gi|422495646|ref|ZP_16571933.1| GTP diphosphokinase [Propionibacterium acnes HL025PA1]
gi|422524246|ref|ZP_16600255.1| GTP diphosphokinase [Propionibacterium acnes HL053PA2]
gi|422532216|ref|ZP_16608162.1| GTP diphosphokinase [Propionibacterium acnes HL110PA1]
gi|50840248|gb|AAT82915.1| GTP pyrophosphokinase [Propionibacterium acnes KPA171202]
gi|289154134|gb|EFD02822.1| GTP diphosphokinase [Propionibacterium acnes SK187]
gi|313792000|gb|EFS40101.1| GTP diphosphokinase [Propionibacterium acnes HL110PA1]
gi|313812804|gb|EFS50518.1| GTP diphosphokinase [Propionibacterium acnes HL025PA1]
gi|313838871|gb|EFS76585.1| GTP diphosphokinase [Propionibacterium acnes HL086PA1]
gi|315077872|gb|EFT49923.1| GTP diphosphokinase [Propionibacterium acnes HL053PA2]
gi|315105673|gb|EFT77649.1| GTP diphosphokinase [Propionibacterium acnes HL030PA1]
gi|327453281|gb|EGE99935.1| GTP diphosphokinase [Propionibacterium acnes HL092PA1]
gi|333763083|gb|EGL40553.1| GTP diphosphokinase [Propionibacterium sp. 434-HC2]
gi|335277585|gb|AEH29490.1| GTP pyrophosphokinase [Propionibacterium acnes 6609]
gi|340767284|gb|EGR89809.1| GTP diphosphokinase [Propionibacterium sp. CC003-HC2]
Length = 774
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|289427301|ref|ZP_06429016.1| GTP diphosphokinase [Propionibacterium acnes J165]
gi|354607125|ref|ZP_09025095.1| hypothetical protein HMPREF1003_01662 [Propionibacterium sp.
5_U_42AFAA]
gi|386024111|ref|YP_005942416.1| GTP pyrophosphokinase [Propionibacterium acnes 266]
gi|407935561|ref|YP_006851203.1| GTP pyrophosphokinase [Propionibacterium acnes C1]
gi|417929159|ref|ZP_12572543.1| GTP diphosphokinase [Propionibacterium acnes SK182]
gi|422384764|ref|ZP_16464899.1| GTP diphosphokinase [Propionibacterium acnes HL096PA3]
gi|422388618|ref|ZP_16468721.1| GTP diphosphokinase [Propionibacterium acnes HL096PA2]
gi|422392957|ref|ZP_16473010.1| GTP diphosphokinase [Propionibacterium acnes HL099PA1]
gi|422424630|ref|ZP_16501580.1| GTP diphosphokinase [Propionibacterium acnes HL043PA1]
gi|422430858|ref|ZP_16507737.1| GTP diphosphokinase [Propionibacterium acnes HL072PA2]
gi|422449215|ref|ZP_16525940.1| GTP diphosphokinase [Propionibacterium acnes HL036PA3]
gi|422462028|ref|ZP_16538652.1| GTP diphosphokinase [Propionibacterium acnes HL038PA1]
gi|422474898|ref|ZP_16551362.1| GTP diphosphokinase [Propionibacterium acnes HL056PA1]
gi|422478227|ref|ZP_16554650.1| GTP diphosphokinase [Propionibacterium acnes HL007PA1]
gi|422480763|ref|ZP_16557166.1| GTP diphosphokinase [Propionibacterium acnes HL063PA1]
gi|422483265|ref|ZP_16559654.1| GTP diphosphokinase [Propionibacterium acnes HL036PA1]
gi|422488505|ref|ZP_16564834.1| GTP diphosphokinase [Propionibacterium acnes HL013PA2]
gi|422490606|ref|ZP_16566921.1| GTP diphosphokinase [Propionibacterium acnes HL020PA1]
gi|422498374|ref|ZP_16574646.1| GTP diphosphokinase [Propionibacterium acnes HL002PA3]
gi|422506137|ref|ZP_16582360.1| GTP diphosphokinase [Propionibacterium acnes HL036PA2]
gi|422508247|ref|ZP_16584428.1| GTP diphosphokinase [Propionibacterium acnes HL046PA2]
gi|422513517|ref|ZP_16589640.1| GTP diphosphokinase [Propionibacterium acnes HL087PA2]
gi|422518763|ref|ZP_16594831.1| GTP diphosphokinase [Propionibacterium acnes HL074PA1]
gi|422522018|ref|ZP_16598048.1| GTP diphosphokinase [Propionibacterium acnes HL045PA1]
gi|422527406|ref|ZP_16603396.1| GTP diphosphokinase [Propionibacterium acnes HL083PA1]
gi|422529839|ref|ZP_16605805.1| GTP diphosphokinase [Propionibacterium acnes HL053PA1]
gi|422534482|ref|ZP_16610406.1| GTP diphosphokinase [Propionibacterium acnes HL072PA1]
gi|422537214|ref|ZP_16613102.1| GTP diphosphokinase [Propionibacterium acnes HL078PA1]
gi|422552107|ref|ZP_16627898.1| GTP diphosphokinase [Propionibacterium acnes HL005PA3]
gi|422554043|ref|ZP_16629815.1| GTP diphosphokinase [Propionibacterium acnes HL005PA2]
gi|422560824|ref|ZP_16636511.1| GTP diphosphokinase [Propionibacterium acnes HL005PA1]
gi|422568522|ref|ZP_16644140.1| GTP diphosphokinase [Propionibacterium acnes HL002PA2]
gi|289159500|gb|EFD07689.1| GTP diphosphokinase [Propionibacterium acnes J165]
gi|313771968|gb|EFS37934.1| GTP diphosphokinase [Propionibacterium acnes HL074PA1]
gi|313807661|gb|EFS46148.1| GTP diphosphokinase [Propionibacterium acnes HL087PA2]
gi|313810168|gb|EFS47889.1| GTP diphosphokinase [Propionibacterium acnes HL083PA1]
gi|313818698|gb|EFS56412.1| GTP diphosphokinase [Propionibacterium acnes HL046PA2]
gi|313820468|gb|EFS58182.1| GTP diphosphokinase [Propionibacterium acnes HL036PA1]
gi|313822726|gb|EFS60440.1| GTP diphosphokinase [Propionibacterium acnes HL036PA2]
gi|313825340|gb|EFS63054.1| GTP diphosphokinase [Propionibacterium acnes HL063PA1]
gi|313830499|gb|EFS68213.1| GTP diphosphokinase [Propionibacterium acnes HL007PA1]
gi|313833535|gb|EFS71249.1| GTP diphosphokinase [Propionibacterium acnes HL056PA1]
gi|314925077|gb|EFS88908.1| GTP diphosphokinase [Propionibacterium acnes HL036PA3]
gi|314960386|gb|EFT04488.1| GTP diphosphokinase [Propionibacterium acnes HL002PA2]
gi|314973499|gb|EFT17595.1| GTP diphosphokinase [Propionibacterium acnes HL053PA1]
gi|314976179|gb|EFT20274.1| GTP diphosphokinase [Propionibacterium acnes HL045PA1]
gi|314978562|gb|EFT22656.1| GTP diphosphokinase [Propionibacterium acnes HL072PA2]
gi|314983799|gb|EFT27891.1| GTP diphosphokinase [Propionibacterium acnes HL005PA1]
gi|314987980|gb|EFT32071.1| GTP diphosphokinase [Propionibacterium acnes HL005PA2]
gi|314989790|gb|EFT33881.1| GTP diphosphokinase [Propionibacterium acnes HL005PA3]
gi|315080497|gb|EFT52473.1| GTP diphosphokinase [Propionibacterium acnes HL078PA1]
gi|315085511|gb|EFT57487.1| GTP diphosphokinase [Propionibacterium acnes HL002PA3]
gi|315088432|gb|EFT60408.1| GTP diphosphokinase [Propionibacterium acnes HL072PA1]
gi|315096046|gb|EFT68022.1| GTP diphosphokinase [Propionibacterium acnes HL038PA1]
gi|327326326|gb|EGE68116.1| GTP diphosphokinase [Propionibacterium acnes HL096PA2]
gi|327331799|gb|EGE73536.1| GTP diphosphokinase [Propionibacterium acnes HL096PA3]
gi|327443576|gb|EGE90230.1| GTP diphosphokinase [Propionibacterium acnes HL013PA2]
gi|327448237|gb|EGE94891.1| GTP diphosphokinase [Propionibacterium acnes HL043PA1]
gi|328753331|gb|EGF66947.1| GTP diphosphokinase [Propionibacterium acnes HL020PA1]
gi|328760712|gb|EGF74278.1| GTP diphosphokinase [Propionibacterium acnes HL099PA1]
gi|332675569|gb|AEE72385.1| GTP pyrophosphokinase [Propionibacterium acnes 266]
gi|340773282|gb|EGR95774.1| GTP diphosphokinase [Propionibacterium acnes SK182]
gi|353557240|gb|EHC26609.1| hypothetical protein HMPREF1003_01662 [Propionibacterium sp.
5_U_42AFAA]
gi|407904142|gb|AFU40972.1| GTP pyrophosphokinase [Propionibacterium acnes C1]
gi|456739915|gb|EMF64454.1| GTP pyrophosphokinase [Propionibacterium acnes FZ1/2/0]
Length = 774
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|161507422|ref|YP_001577376.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
gi|160348411|gb|ABX27085.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
Length = 746
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + + AG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG GVA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEGVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++ A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRWIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|425459584|ref|ZP_18839070.1| hypothetical protein MICAG_950016 [Microcystis aeruginosa PCC 9808]
gi|389822624|emb|CCI29699.1| hypothetical protein MICAG_950016 [Microcystis aeruginosa PCC 9808]
Length = 559
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + HRGQ SG PY+ H + A LL +G +ST++AAG LHD ++D +
Sbjct: 246 DLICRAFNFAYQLHRGQYCKSGKPYITHPIAVAGLLRDLGGSSTIIAAGFLHDVVEDTEV 305
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAV 348
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 306 TPEEIEARFGFEVRNLVEAVTKLSKY-------NFSSKTERQAENFRRMFLAMAQDIRVI 358
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLA+RLHNM TL+ L ++QR A ET EIF PLAN LGI +K +LE+LCFK+L PD
Sbjct: 359 VVKLAERLHNMQTLEYLNPQQQQRIALETREIFAPLANCLGIERFKWELEDLCFKYLEPD 418
Query: 409 QHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ +S K ++ EA + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 419 AYRTVQLLVSEKRID--REACIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 476
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N Y
Sbjct: 477 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRY 529
>gi|334127724|ref|ZP_08501627.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
gi|333388860|gb|EGK60030.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
Length = 743
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 179/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQ+R SGD Y++H + A +L ++ + + A LLHD ++D + +
Sbjct: 32 RAYVYAEKAHSGQVRISGDAYIMHPLNVAYILTSLHLDDETICAALLHDVVEDTCATLEE 91
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG + +L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLA
Sbjct: 92 MEAQFGKNIMELIDGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIKLA 145
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + KR R AKETLE++ PLANRLGIS KV+LE+LC ++L P+ + L
Sbjct: 146 DRLHNMRTLKYMREDKRHRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYAL 205
Query: 414 SSKLVECFDEAM--VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ E + +I+++ + L+ I + GR K YSI+ KM + +++EI
Sbjct: 206 VEEVKHKRQERQDFIRESIQQIREKLEVAGIEAEI-KGRAKHFYSIYRKMKRDNKSVNEI 264
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 265 YDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|422516400|ref|ZP_16592509.1| GTP diphosphokinase [Propionibacterium acnes HL110PA2]
gi|422545278|ref|ZP_16621108.1| GTP diphosphokinase [Propionibacterium acnes HL082PA1]
gi|313802050|gb|EFS43284.1| GTP diphosphokinase [Propionibacterium acnes HL110PA2]
gi|314962656|gb|EFT06756.1| GTP diphosphokinase [Propionibacterium acnes HL082PA1]
Length = 774
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|404497180|ref|YP_006721286.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter metallireducens GS-15]
gi|418066658|ref|ZP_12704018.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
gi|78194783|gb|ABB32550.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter metallireducens GS-15]
gi|373560151|gb|EHP86423.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
Length = 716
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 182/291 (62%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ + H+GQ R SG+PYL+H +E A LLA + + V GLLHDT++D
Sbjct: 21 DLVRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGLLADLRLDVPTVVTGLLHDTIEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FGA VA+LV+GV+K+S++ +E + +A+ M LAMA D R +L
Sbjct: 81 TREELEGLFGAEVANLVDGVTKISKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ A+ETL+I+ P+ANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSIARETLDIYAPIANRLGISWIKSELEDLSFRYLEPQI 194
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 466
+ +L+SK+ + E S ++++ + + DK + + + GR K LYSI KM + +
Sbjct: 195 YYDLASKVTKKKKER--ESYVDEVRKIIVDKLVEHDIKGEVFGRSKHLYSIWRKMQSRSV 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D+ +R++V + +CY+ L ++H W +PG+ KDYI PK N Y
Sbjct: 253 DIDQIYDLIAIRVMVNDIRECYEVLGLIHSTWKPIPGRFKDYIAMPKGNMY 303
>gi|418412040|ref|ZP_12985305.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
gi|410890054|gb|EKS37854.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
Length = 729
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 183/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA +T+AI K+E + + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIENEMTNMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|365962856|ref|YP_004944422.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965098|ref|YP_004946663.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn17]
gi|422451696|ref|ZP_16528397.1| GTP diphosphokinase [Propionibacterium acnes HL030PA2]
gi|422501466|ref|ZP_16577720.1| GTP diphosphokinase [Propionibacterium acnes HL063PA2]
gi|422543035|ref|ZP_16618885.1| GTP diphosphokinase [Propionibacterium acnes HL037PA1]
gi|313827636|gb|EFS65350.1| GTP diphosphokinase [Propionibacterium acnes HL063PA2]
gi|314967479|gb|EFT11578.1| GTP diphosphokinase [Propionibacterium acnes HL037PA1]
gi|315108540|gb|EFT80516.1| GTP diphosphokinase [Propionibacterium acnes HL030PA2]
gi|365739537|gb|AEW83739.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365741779|gb|AEW81473.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn17]
Length = 774
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|352518328|ref|YP_004887645.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
gi|348602435|dbj|BAK95481.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
Length = 737
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 177/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A AH+ Q R SG+PY++H ++ A +LA + + +A G LHD ++D ++
Sbjct: 27 FVKKAYEYAVDAHKDQYRKSGEPYIIHPIQVAGILAELHMDPHTIAVGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL ++ + E A + M LAMA D R +++
Sbjct: 87 LDDLKNEFGHDVAMIVDGVTKLGKIKYKSHEEQLA------ENYRKMLLAMAQDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLRDDKQRRIARETLEIYAPLADRLGISRIKWELEDLSLRYLNPKQY 200
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + D E V A+E++ A +D +I + + GR K +YS++ KM+ KK
Sbjct: 201 YRIVHLMQSKRDEREKYVKQAVEEIRIATEDLDI-YAEIYGRPKHIYSVYRKMVDKKKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 260 DEIYDLLAIRVIVDSIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANMY 308
>gi|418326147|ref|ZP_12937339.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
gi|365226304|gb|EHM67523.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
Length = 729
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 183/290 (63%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA +T+AI K+E + + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIENEMTNMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|335051392|ref|ZP_08544312.1| GTP diphosphokinase [Propionibacterium sp. 409-HC1]
gi|333766726|gb|EGL44010.1| GTP diphosphokinase [Propionibacterium sp. 409-HC1]
Length = 774
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|419421340|ref|ZP_13961568.1| GTP pyrophosphokinase [Propionibacterium acnes PRP-38]
gi|422396586|ref|ZP_16476617.1| GTP diphosphokinase [Propionibacterium acnes HL097PA1]
gi|327330397|gb|EGE72146.1| GTP diphosphokinase [Propionibacterium acnes HL097PA1]
gi|379977831|gb|EIA11156.1| GTP pyrophosphokinase [Propionibacterium acnes PRP-38]
Length = 774
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|284105197|ref|ZP_06386190.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Poribacteria sp. WGA-A3]
gi|283830148|gb|EFC34409.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Poribacteria sp. WGA-A3]
Length = 728
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 177/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + +A+ + +AH GQ R SG+PYL H V A +L + + T + AGLLHDTL+D
Sbjct: 25 EALLRRAYAFSAKAHEGQTRRSGEPYLQHPVAVAGILTFLKLDVTAIVAGLLHDTLEDTV 84
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ + + FG VA LVEGV+K+ Q+ E +A+ M L+MAD R V
Sbjct: 85 ATQEELQTHFGHEVAHLVEGVTKIGQIPFRTYEEK------QAENFRKMLLSMADDIRVV 138
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
IKLADRLHNM TL LP K+++ A+ETLEI+ PLANRLG+S K +LE+LCF++L +
Sbjct: 139 FIKLADRLHNMRTLGHLPEDKQKQIAQETLEIYSPLANRLGMSWLKQELEDLCFQYLKTE 198
Query: 409 QHTELSSKLVECFDEAMVT--SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ L ++ + +E V+ S I++ AL + V+ GR K LYSIH KM + +
Sbjct: 199 AYSLLKLRVAQRDEERQVSVQSIIQETVDALAAAELPGHVV-GRPKHLYSIHQKMESQGI 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +E+HD+ +R+I + +CY L +VH LW VPG+ KDYI P+ N Y
Sbjct: 258 TFEEVHDLVAIRIITGTKSNCYTILGLVHSLWPPVPGRFKDYIATPRTNLY 308
>gi|302527845|ref|ZP_07280187.1| GTP pyrophosphokinase [Streptomyces sp. AA4]
gi|302436740|gb|EFL08556.1| GTP pyrophosphokinase [Streptomyces sp. AA4]
Length = 777
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 76 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLEQ 135
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V +LV+GV+KL ++ KL + EA+ + M +AMA D R ++IKLA
Sbjct: 136 LKADFGDKVGELVDGVTKLDKV-KLG-------TSAEAETIRKMVIAMAKDPRVLVIKLA 187
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 247
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + + + I L L I+ V GR K YSIH KM+ + +D+I
Sbjct: 248 VRLVADRAPSRDTYLRKVIADLTNNLVSSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 306
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R++VE+ DCY A+ VVH LW VPG+ KDYI +P+F Y
Sbjct: 307 HDLVGVRILVEDVRDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVY 352
>gi|289523398|ref|ZP_06440252.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503090|gb|EFD24254.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 764
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 174/289 (60%), Gaps = 16/289 (5%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A H+ Q RA+G+PY++H + A +L+ + + + A LLHD ++D +++
Sbjct: 75 EAFVYAANKHKNQKRATGEPYVVHVLSVAGILSDVNIDVETLVAALLHDVIEDTDSTFEE 134
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DARAVLI 350
+ FG VA LV+GV+KL N KTVE A+ L MFL MA D R VLI
Sbjct: 135 VKAKFGTNVAVLVDGVTKL---------GNIDFKTVEDYQAENLRKMFLVMAKDIRVVLI 185
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ L K+ R A+ETLEI+ PLA+RLGI K +LE+L FK L PD +
Sbjct: 186 KLADRLHNMRTIQVLRREKQLRIARETLEIYAPLAHRLGIYHMKRELEDLAFKVLEPDMY 245
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ ++ + EA++ AI+ L + L + I + GR K YSI+ KM +K LT+
Sbjct: 246 YEIRRRVRKKLPEREAIIKEAIDALSKKLDEGGIRAFI-TGRAKHFYSIYEKMKRKNLTI 304
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++++D+ LR+I + DCYQ L +VH +W +PG+ DYI PK N Y
Sbjct: 305 EQMYDLLALRVITNSVVDCYQVLGIVHTIWKPIPGQFDDYIANPKSNMY 353
>gi|145594359|ref|YP_001158656.1| RelA/SpoT family protein [Salinispora tropica CNB-440]
gi|145303696|gb|ABP54278.1| RelA/SpoT family protein [Salinispora tropica CNB-440]
Length = 815
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 113 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 172
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 173 MRADFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 224
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 225 DRLHNMRTLIFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 284
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E EA++ K+ LK I V GR K LYSI+ KM+ + ++I
Sbjct: 285 NRLIGEHQPQREALLRQVTRKVGTDLKSAKIRAEV-TGRPKHLYSIYQKMIVRGRDFNDI 343
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 344 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 389
>gi|302877631|ref|YP_003846195.1| (p)ppGpp synthetase I SpoT/RelA [Gallionella capsiferriformans
ES-2]
gi|302580420|gb|ADL54431.1| (p)ppGpp synthetase I, SpoT/RelA [Gallionella capsiferriformans
ES-2]
Length = 702
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 179/288 (62%), Gaps = 11/288 (3%)
Query: 234 IKAFYEAER-AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
I+A E R AH+GQ R SGDPY+ H + A +L + ++ + A LLHD ++D ++
Sbjct: 23 IRAAIEFSRIAHQGQTRQSGDPYVTHPIAVARILTPLHLDAQSIIAALLHDVVEDTEITT 82
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I FG VA+LV G+SKL ++ RE+ +A+ M LAMA D R +LIK
Sbjct: 83 EQIAEQFGKPVAELVGGLSKLEKIHFETRED------AQAENFRKMLLAMARDVRVILIK 136
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TLD++ K +R A+ET+EI+ P+ANRLG++ ++L++L FKHL+P+++T
Sbjct: 137 LADRLHNMRTLDSMRQDKCERIARETMEIYAPIANRLGLNEIYLELQDLSFKHLHPNRYT 196
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L+ K+ +V ++ + L+ K + V GR K++YSI+ KM K L
Sbjct: 197 VLAKALKVARGNRREVVGKILDAIRGQLEKKQVQAEV-TGREKNIYSIYKKMQLKSLAFS 255
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
E+ DIYG R++VE+ CY AL +H L+ +PGK+KDYI PK NGY
Sbjct: 256 EVLDIYGFRVLVEDTNACYLALGALHALYKPIPGKIKDYIAIPKSNGY 303
>gi|347753065|ref|YP_004860630.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 36D1]
gi|347585583|gb|AEP01850.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 36D1]
Length = 729
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 176/281 (62%), Gaps = 10/281 (3%)
Query: 240 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 299
A +AH GQ R SG+PY++H ++ A +LA + + + VAAG LHD ++D ++ D + F
Sbjct: 35 ASKAHEGQKRKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTDVTLDELREEF 94
Query: 300 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHN 358
VA LV+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHN
Sbjct: 95 NDEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHN 148
Query: 359 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--K 416
M TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K
Sbjct: 149 MRTLKHLPPEKQRRIANETLEIFAPLAHRLGISAIKWELEDTSLRYLNPQQYYRIVNLMK 208
Query: 417 LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 476
E + + IE++++ L D +I + GR K +YSI+ KM+++ +EI+D+
Sbjct: 209 RKRAEREQYLQNVIEEVKERLADIHIKSEI-SGRPKHIYSIYRKMVQQHKQFNEIYDLLA 267
Query: 477 LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+R+IV++ +DCY L V+H W +PG+ KDYI PK N Y
Sbjct: 268 VRIIVKSIKDCYAVLGVIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|117928545|ref|YP_873096.1| (p)ppGpp synthetase I SpoT/RelA [Acidothermus cellulolyticus 11B]
gi|117649008|gb|ABK53110.1| (p)ppGpp synthetase I, SpoT/RelA [Acidothermus cellulolyticus 11B]
Length = 820
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 176/288 (61%), Gaps = 12/288 (4%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ AE HRGQ+R SGDPY+ H + A +LA +G + A LLHDT++D +
Sbjct: 105 VQRAYEVAEFYHRGQLRRSGDPYITHPLAVATILAELGMTPPTIVAALLHDTVEDTTYTL 164
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
D + R FG VA LV+GV+KL R + TVE R M +AMA D R +++K
Sbjct: 165 DQLRRDFGDEVASLVDGVTKLD------RVKYGDAATVETVR--KMVVAMARDPRVLVLK 216
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL LP K++R A+ETLEI+ PLA+RLG++T K +LE+L F L P ++
Sbjct: 217 LADRLHNMRTLRYLPPEKQERKARETLEIYAPLAHRLGMNTLKWELEDLSFATLYPKRYE 276
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
E++ + E + + + IE++ L+ I V GR K YSI+ KM+ +
Sbjct: 277 EIARLVAERAPSRDTYLANVIEQVSAQLRAAKIKATV-TGRPKHYYSIYQKMIVRGRDFA 335
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ G+R++V+ DCY AL ++H +W VPG+ KD+I PKFN Y
Sbjct: 336 DIYDLLGVRVLVDTVRDCYAALGIIHAMWNPVPGRFKDFIAMPKFNLY 383
>gi|108804177|ref|YP_644114.1| (p)ppGpp synthetase I SpoT/RelA [Rubrobacter xylanophilus DSM 9941]
gi|108765420|gb|ABG04302.1| (p)ppGpp synthetase I, SpoT/RelA [Rubrobacter xylanophilus DSM
9941]
Length = 742
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 182/291 (62%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E+ + +A+ A AHRGQ R SG+P++LH + TA +LA + + T +AA LLHD L+D
Sbjct: 37 EELIAEAYNLAHAAHRGQRRRSGEPFILHPLATADILADLRMDPTTIAAALLHDVLEDTG 96
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ + + FGA VA++V+GV+KL +L E +A+ L M +AM+ D R +
Sbjct: 97 VTKEELAGRFGAEVAEIVDGVTKLKRLPSGNLEE------AQAESLRKMIVAMSRDVRVI 150
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
+IKLADRLHNM TL+ L + A ETLEI+ PLA+RLGI + K +LE+L F L+P
Sbjct: 151 IIKLADRLHNMRTLEYLKRETQLEKATETLEIYAPLAHRLGIYSLKWELEDLAFATLHPR 210
Query: 409 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ E+ + DE A +++ +L++ L + I V GR K YSI+ KM+++
Sbjct: 211 RYEEIKRLVAARRDEREAFISARAAELKRYLSEAGIEAEVR-GRVKHFYSIYNKMVRRNK 269
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ GLR+IV + DCY AL V+H +W +PG+ KDYI PKFN Y
Sbjct: 270 EFNEIYDLAGLRVIVGSVRDCYGALGVIHSVWKPIPGRFKDYIAMPKFNMY 320
>gi|429760116|ref|ZP_19292606.1| GTP diphosphokinase [Veillonella atypica KON]
gi|429178521|gb|EKY19799.1| GTP diphosphokinase [Veillonella atypica KON]
Length = 746
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 194/329 (58%), Gaps = 19/329 (5%)
Query: 192 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 251
AL+++ FN E+ + E Y +L + + D ++KAF A++AH GQ RAS
Sbjct: 10 ALVEQKGFNKEEALKE--FMDYVHSYLGDDEC-------DQIMKAFTLADKAHEGQFRAS 60
Query: 252 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 311
G+PY++H + A +LA + + + A LLHD ++D + + I + FGA VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGAEVAFLVDGVT 120
Query: 312 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 370
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKDMRSDKQ 174
Query: 371 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 428
+R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVND 234
Query: 429 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 488
+E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPDCY 293
Query: 489 QALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L + H +W +P + KDYI+ PK N Y
Sbjct: 294 AVLGIAHSIWKPLPYRFKDYISMPKSNMY 322
>gi|295108479|emb|CBL22432.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus obeum A2-162]
Length = 789
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 189/290 (65%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH+ Q R SG+PY++H + A++LA + + + AGLLHD ++D +++
Sbjct: 77 MIQKAYEVASDAHKDQKRKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMT 136
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ + + F A VA LV+GV+KL QLS +A K ++A+ L MFLAMA D R +L
Sbjct: 137 TEEVEKEFSAEVALLVDGVTKLGQLS------YSADKVELQAENLRKMFLAMAKDIRVIL 190
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD
Sbjct: 191 IKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDV 250
Query: 410 HTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L +K L + + V + +++++Q + + I V GR K +SI+ KM+ + T
Sbjct: 251 YYDLVNKVALRKSERQEFVNNIVKQVKQHMDEAAIKAQV-DGRIKHFFSIYKKMVNQDKT 309
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D++ +R++V+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 310 IDQIYDLFAVRILVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMY 359
>gi|317968168|ref|ZP_07969558.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. CB0205]
Length = 786
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 176/293 (60%), Gaps = 13/293 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + AF A + H GQ+RASG+PY+ H V A LL IGA++ V+AAG LHD ++D
Sbjct: 69 EALLASAFDFAFQLHDGQVRASGEPYICHPVAVADLLRDIGASAGVIAAGFLHDVVEDTE 128
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAV 348
++ + I + FG+ V LVEGV+KL + + T +A+ L MFLAM +D R V
Sbjct: 129 VTPEEIEQHFGSEVRGLVEGVTKLGGI------HFTNKTEAQAENLRRMFLAMVSDIRVV 182
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP- 407
L+KLADRLHNM TL AL K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P
Sbjct: 183 LVKLADRLHNMRTLGALKPEKQQRIARETREIYGPLANRLGIGRFKWELEDLAFKILEPE 242
Query: 408 ---DQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
D ++SSK + + VT+ I L L + + GR K LY I KM +
Sbjct: 243 AFRDVQQQVSSKRSDREERLGVTADI--LSGKLSSVGLGECEVSGRPKHLYGIWNKMQTQ 300
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ LR+I N E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 301 RKAFHEIYDVAALRIICPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 353
>gi|217420352|ref|ZP_03451857.1| GTP diphosphokinase [Burkholderia pseudomallei 576]
gi|217395764|gb|EEC35781.1| GTP diphosphokinase [Burkholderia pseudomallei 576]
Length = 789
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGY
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGY 355
>gi|187778360|ref|ZP_02994833.1| hypothetical protein CLOSPO_01952 [Clostridium sporogenes ATCC
15579]
gi|187771985|gb|EDU35787.1| RelA/SpoT family protein [Clostridium sporogenes ATCC 15579]
Length = 723
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L K+ E E + + L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIVSNLQQNLKKAGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N Y
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMY 301
>gi|255658298|ref|ZP_05403707.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
gi|260849615|gb|EEX69622.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
Length = 740
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ A +AH GQ R SG+ Y++H + A +L + + ++A LLHD ++D
Sbjct: 28 DLIRRAYELARKAHAGQTRVSGEAYIIHPLHVAQILTQLHLDDATISAALLHDVVEDTIY 87
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA L++GV+KL +L ++E + + MFLAMA D R ++
Sbjct: 88 TNDQMKEMFGDEVAMLIDGVTKLGRLQYKSKEE------AQLESYRKMFLAMAKDIRVIM 141
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++R A+ET+EI+ PLANRLGIS+ K +LE+LC ++L P+
Sbjct: 142 IKLADRLHNMRTLKYMREDKQKRIARETIEIYAPLANRLGISSIKWELEDLCLRYLEPEI 201
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E + ++IE++++ L + +I + GR K YSI+ KM +
Sbjct: 202 YYDLVENVKQKRKERQTFIDTSIEQIKEKLAEAHIKADI-SGRAKHFYSIYKKMKRDNKE 260
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ +R++V++ +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 261 LSEIYDLSAVRVLVDSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|206890423|ref|YP_002248838.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742361|gb|ACI21418.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 702
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ + AH Q R G PY+ H + A +LA + +ST +AAGLLHDT++DA +
Sbjct: 21 ELIKKAYIFSREAHCAQKRKEGIPYIYHPLAVAAILADMKLDSTTIAAGLLHDTVEDAEM 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D I F VA LV+ V+KLS+L + + +A+ MFLAM+ D R +L
Sbjct: 81 TIDDIGEIFTPDVAFLVDAVTKLSKL------QFSTVEEAQAESFRKMFLAMSKDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IK ADRLHNM T++ LP K++R AKETLEI+ PLANRLGI + + E+L FK L PD+
Sbjct: 135 IKFADRLHNMRTIEFLPPDKQKRIAKETLEIYAPLANRLGIGWMRSEFEDLSFKVLYPDE 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + + +A + + I L + + NI F + GR K Y I+ K++K+K+
Sbjct: 195 YDDLVKKVAKRKEDQQAYIDNVINILSEKISAMNIPFKIY-GRVKHYYGIYQKLIKQKIP 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++++D+ G+R+I + CY L ++H LW +PG+ KD+I+ PK N Y
Sbjct: 254 FEQVYDVIGIRIITDTVPHCYDILGIIHSLWTLIPGRFKDFISLPKSNYY 303
>gi|169831064|ref|YP_001717046.1| (p)ppGpp synthetase I SpoT/RelA [Candidatus Desulforudis
audaxviator MP104C]
gi|169637908|gb|ACA59414.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Desulforudis
audaxviator MP104C]
Length = 712
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 178/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ +A+ A+ AH Q R SG+ +++H +E A +LA + + V GLLHD ++DA +
Sbjct: 21 FIQRAYEFAQEAHHNQKRISGEDFIVHPLEVAQILAELELDLESVVGGLLHDVIEDAGIE 80
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA LV+GV+KL +L+ ++E +A+ L M LAMA D R +LI
Sbjct: 81 LCVIREEFGDEVALLVDGVTKLRRLAYRSKEEQ------QAENLRKMLLAMAKDVRVILI 134
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHN+ TL + K++ A+ETLEIF PLA+RLGI K +LE++ F+ P++H
Sbjct: 135 KLADRLHNLRTLQYHTVPKQREIAQETLEIFAPLAHRLGIYRIKSELEDIAFRFREPERH 194
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
EL+ +L E + I+ L++ L I+ + GR K LYSI+ KML ++ +
Sbjct: 195 EELTRRLSATRSVREGYIGGVIKILQEKLGGMGITADI-QGRPKHLYSIYQKMLAQEKDL 253
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI DI G+R++VE+ +DCY L VVH LW VPG+ KDYI PK N Y
Sbjct: 254 EEIFDILGIRILVESVKDCYATLGVVHTLWKPVPGRFKDYIAMPKSNMY 302
>gi|417647325|ref|ZP_12297167.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
gi|329724679|gb|EGG61185.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
Length = 729
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K++Y A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYYIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA +T+AI K++ + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|257416410|ref|ZP_05593404.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
gi|422695354|ref|ZP_16753342.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
gi|257158238|gb|EEU88198.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
gi|315147637|gb|EFT91653.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
Length = 737
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG +A LV+GV+KL ++ + E A+ M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQL------AENHRKMLLAMAQDLRVIM 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + + D EA V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMY 308
>gi|86740082|ref|YP_480482.1| (p)ppGpp synthetase I [Frankia sp. CcI3]
gi|86566944|gb|ABD10753.1| (p)ppGpp synthetase I [Frankia sp. CcI3]
Length = 862
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 190/318 (59%), Gaps = 24/318 (7%)
Query: 203 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 262
D ++ G L + + +A Q +AF A+ AH GQ+R SG PY+ H +
Sbjct: 126 DPVLRGLLANHPRADIAQVQ------------QAFEVADAAHAGQVRFSGHPYITHPIAV 173
Query: 263 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 322
A +LA +G ++ ++A LLHDTL++ L+ D I TFG +A +V+ VSKL+++
Sbjct: 174 ASILADLGMDTATLSAALLHDTLEETTLTVDAIRDTFGDHIALIVDAVSKLNRVK----- 228
Query: 323 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 381
+ +A+ + M +AMA D RA+++KLADRLHNM TL LP K++R A+ETLE++
Sbjct: 229 ---VGEAAQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLPEHKQERKARETLEVY 285
Query: 382 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKD 439
PLA+RLG+++ K +LE+L F L P ++ E+ + + + + I +++ L+D
Sbjct: 286 APLAHRLGMNSLKWELEDLSFAALYPKRYDEIVRLVADRAPSRDVYLAEVIGQVQVGLRD 345
Query: 440 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 499
I V+ GR K YSI+ KM+ + + D+I+D+ G+R++V++ DCY L VH W
Sbjct: 346 ARIK-AVVSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVDSVRDCYATLGTVHATWK 404
Query: 500 EVPGKMKDYITRPKFNGY 517
+PG+ KDYI PKFN Y
Sbjct: 405 PIPGRFKDYIAMPKFNMY 422
>gi|256961538|ref|ZP_05565709.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
gi|293384703|ref|ZP_06630558.1| GTP diphosphokinase [Enterococcus faecalis R712]
gi|293387403|ref|ZP_06631958.1| GTP diphosphokinase [Enterococcus faecalis S613]
gi|312908311|ref|ZP_07767275.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
gi|312910615|ref|ZP_07769457.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
gi|256952034|gb|EEU68666.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
gi|291078010|gb|EFE15374.1| GTP diphosphokinase [Enterococcus faecalis R712]
gi|291083194|gb|EFE20157.1| GTP diphosphokinase [Enterococcus faecalis S613]
gi|310625725|gb|EFQ09008.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
gi|311289163|gb|EFQ67719.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
Length = 737
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG +A LV+GV+KL ++ + E A M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLAENH------RKMLLAMAQDLRVIM 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + + D EA V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMY 308
>gi|149927813|ref|ZP_01916064.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Limnobacter sp. MED105]
gi|149823435|gb|EDM82666.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Limnobacter sp. MED105]
Length = 742
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 190/321 (59%), Gaps = 17/321 (5%)
Query: 200 NMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHC 259
N D + L A +L A+++ V +A+ ++ AH GQ RA+G+PY+ H
Sbjct: 11 NRPDVVSIAQLIGLASTYLPEAEIRR-------VREAYKFSDVAHLGQFRATGEPYVTHP 63
Query: 260 VETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKL 319
+ A L A+ +S + A LLHD ++D+ + + + FG VADLV+G+SKL ++
Sbjct: 64 IAVAELCASWRLDSQAIQAALLHDVMEDSGTTKEDLIERFGGSVADLVDGLSKLDKMEFS 123
Query: 320 ARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETL 378
+RE +A+ M LAMA D R +L+KLADRLHNM TLD + K++R A ETL
Sbjct: 124 SREE------AQAENFRKMLLAMARDLRVILVKLADRLHNMRTLDIMSPAKKRRIALETL 177
Query: 379 EIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQA 436
EI+ P+A+RLG++ +L+ L F+H P ++ L ++ +V +E +E+
Sbjct: 178 EIYAPIAHRLGLNEIFRELQELSFQHAYPMRYEVLKKAVLAARGNRREVVGKILEAVEKC 237
Query: 437 LKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQ 496
L D NI V GR K+LY I+ KM++K+L+ ++ D+YG R++V++ CY A+ ++HQ
Sbjct: 238 LSDANIECQVY-GREKALYGIYRKMIEKRLSFSQVLDVYGFRVVVKDMPGCYMAMGMLHQ 296
Query: 497 LWAEVPGKMKDYITRPKFNGY 517
L+ VPGK KDYI PK NGY
Sbjct: 297 LFKPVPGKFKDYIAIPKLNGY 317
>gi|251780257|ref|ZP_04823177.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084572|gb|EES50462.1| RelA/SpoT family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 728
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 185/294 (62%), Gaps = 18/294 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+Y AE AH+ Q R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D
Sbjct: 19 EMIKKAYYFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTC 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
SY+ + F +A+LV GV+KL ++ +E +AD + M LAMA D R ++
Sbjct: 79 SYESMKTIFNEEIANLVNGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D+
Sbjct: 133 IKLADRLHNMRTLKFMTKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDE 192
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ +L ++ E + +V EKL+++ D +I GR K YSI+ KM+
Sbjct: 193 YYQLVEQIAEKRVERETYINEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMIN 247
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 248 KNKSIEQIFDLTAIRILVNSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|254175404|ref|ZP_04882064.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 10399]
gi|160696448|gb|EDP86418.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 10399]
Length = 789
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L + ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAAIAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGY
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGY 355
>gi|417931889|ref|ZP_12575254.1| GTP diphosphokinase [Propionibacterium acnes SK182B-JCVI]
gi|340775832|gb|EGR97885.1| GTP diphosphokinase [Propionibacterium acnes SK182B-JCVI]
Length = 773
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 172/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 LIDRAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG VA LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEVALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVISIVRQDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|29376496|ref|NP_815650.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
gi|227519316|ref|ZP_03949365.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
gi|229545443|ref|ZP_04434168.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
gi|229549687|ref|ZP_04438412.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
gi|255972385|ref|ZP_05422971.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255975488|ref|ZP_05426074.1| RelA/SpoT protein [Enterococcus faecalis T2]
gi|256762903|ref|ZP_05503483.1| RelA/SpoT protein [Enterococcus faecalis T3]
gi|256853488|ref|ZP_05558858.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
gi|256959287|ref|ZP_05563458.1| RelA/SpoT protein [Enterococcus faecalis DS5]
gi|256964754|ref|ZP_05568925.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
gi|257079353|ref|ZP_05573714.1| RelA/SpoT protein [Enterococcus faecalis JH1]
gi|257082207|ref|ZP_05576568.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
gi|257084825|ref|ZP_05579186.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
gi|257087178|ref|ZP_05581539.1| RelA/SpoT protein [Enterococcus faecalis D6]
gi|257419654|ref|ZP_05596648.1| RelA/SpoT family protein [Enterococcus faecalis T11]
gi|294779745|ref|ZP_06745132.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
gi|300860169|ref|ZP_07106256.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
gi|307268139|ref|ZP_07549526.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
gi|307272834|ref|ZP_07554081.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
gi|307275913|ref|ZP_07557046.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
gi|307277696|ref|ZP_07558782.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
gi|307287881|ref|ZP_07567914.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
gi|307295910|ref|ZP_07575742.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
gi|312900879|ref|ZP_07760173.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
gi|312951286|ref|ZP_07770187.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
gi|384513600|ref|YP_005708693.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
gi|384518976|ref|YP_005706281.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
gi|397700204|ref|YP_006537992.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
gi|422686386|ref|ZP_16744584.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
gi|422692692|ref|ZP_16750707.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
gi|422697189|ref|ZP_16755135.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
gi|422704878|ref|ZP_16762688.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
gi|422711426|ref|ZP_16768355.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
gi|422713284|ref|ZP_16770037.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
gi|422717180|ref|ZP_16773870.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
gi|422719465|ref|ZP_16776106.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
gi|422724016|ref|ZP_16780506.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
gi|422725202|ref|ZP_16781670.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
gi|422730242|ref|ZP_16786635.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
gi|422732553|ref|ZP_16788884.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
gi|422735767|ref|ZP_16792033.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
gi|422741846|ref|ZP_16795868.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
gi|424672845|ref|ZP_18109788.1| GTP diphosphokinase [Enterococcus faecalis 599]
gi|424678338|ref|ZP_18115178.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
gi|424682195|ref|ZP_18118972.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
gi|424685423|ref|ZP_18122121.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
gi|424688183|ref|ZP_18124799.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
gi|424691052|ref|ZP_18127579.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
gi|424694635|ref|ZP_18131031.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
gi|424695820|ref|ZP_18132193.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
gi|424702067|ref|ZP_18138230.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
gi|424704288|ref|ZP_18140390.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
gi|424712754|ref|ZP_18144923.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
gi|424716877|ref|ZP_18146176.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
gi|424722259|ref|ZP_18151323.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
gi|424722967|ref|ZP_18151987.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
gi|424728350|ref|ZP_18156957.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
gi|424740517|ref|ZP_18168899.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
gi|424749874|ref|ZP_18177951.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
gi|424759337|ref|ZP_18187003.1| GTP diphosphokinase [Enterococcus faecalis R508]
gi|428767377|ref|YP_007153488.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
gi|430360791|ref|ZP_19426449.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
gi|430367252|ref|ZP_19427815.1| RelA/SpoT family protein [Enterococcus faecalis M7]
gi|29343960|gb|AAO81720.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
gi|227073245|gb|EEI11208.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
gi|229305167|gb|EEN71163.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
gi|229309359|gb|EEN75346.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
gi|255963403|gb|EET95879.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255968360|gb|EET98982.1| RelA/SpoT protein [Enterococcus faecalis T2]
gi|256684154|gb|EEU23849.1| RelA/SpoT protein [Enterococcus faecalis T3]
gi|256711947|gb|EEU26985.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
gi|256949783|gb|EEU66415.1| RelA/SpoT protein [Enterococcus faecalis DS5]
gi|256955250|gb|EEU71882.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
gi|256987383|gb|EEU74685.1| RelA/SpoT protein [Enterococcus faecalis JH1]
gi|256990237|gb|EEU77539.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
gi|256992855|gb|EEU80157.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
gi|256995208|gb|EEU82510.1| RelA/SpoT protein [Enterococcus faecalis D6]
gi|257161482|gb|EEU91442.1| RelA/SpoT family protein [Enterococcus faecalis T11]
gi|294453119|gb|EFG21534.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
gi|295113238|emb|CBL31875.1| (p)ppGpp synthetase, RelA/SpoT family [Enterococcus sp. 7L76]
gi|300849208|gb|EFK76958.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
gi|306496241|gb|EFM65820.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
gi|306501026|gb|EFM70333.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
gi|306505575|gb|EFM74759.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
gi|306507243|gb|EFM76380.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
gi|306510448|gb|EFM79471.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
gi|306515529|gb|EFM84057.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
gi|310630722|gb|EFQ14005.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
gi|311291978|gb|EFQ70534.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
gi|315025979|gb|EFT37911.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
gi|315028900|gb|EFT40832.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
gi|315033291|gb|EFT45223.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
gi|315034529|gb|EFT46461.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
gi|315143404|gb|EFT87420.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
gi|315149223|gb|EFT93239.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
gi|315152592|gb|EFT96608.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
gi|315159888|gb|EFU03905.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
gi|315161370|gb|EFU05387.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
gi|315163667|gb|EFU07684.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
gi|315167501|gb|EFU11518.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
gi|315174315|gb|EFU18332.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
gi|315574555|gb|EFU86746.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
gi|315581803|gb|EFU93994.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
gi|323481109|gb|ADX80548.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
gi|327535489|gb|AEA94323.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
gi|397336843|gb|AFO44515.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
gi|402349566|gb|EJU84510.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
gi|402351666|gb|EJU86546.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
gi|402353351|gb|EJU88183.1| GTP diphosphokinase [Enterococcus faecalis 599]
gi|402358773|gb|EJU93433.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
gi|402361575|gb|EJU96125.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
gi|402362896|gb|EJU97408.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
gi|402370073|gb|EJV04313.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
gi|402370270|gb|EJV04490.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
gi|402379160|gb|EJV12977.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
gi|402379631|gb|EJV13423.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
gi|402382377|gb|EJV16044.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
gi|402386637|gb|EJV20139.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
gi|402389444|gb|EJV22840.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
gi|402394029|gb|EJV27227.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
gi|402400374|gb|EJV33205.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
gi|402401938|gb|EJV34677.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
gi|402404795|gb|EJV37408.1| GTP diphosphokinase [Enterococcus faecalis R508]
gi|402407443|gb|EJV39973.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
gi|427185550|emb|CCO72774.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
gi|429512728|gb|ELA02326.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
gi|429516725|gb|ELA06204.1| RelA/SpoT family protein [Enterococcus faecalis M7]
Length = 737
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG +A LV+GV+KL ++ + E A M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLAENH------RKMLLAMAQDLRVIM 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + + D EA V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMY 308
>gi|114776357|ref|ZP_01451402.1| GTP pyrophosphokinase [Mariprofundus ferrooxydans PV-1]
gi|114553187|gb|EAU55585.1| GTP pyrophosphokinase [Mariprofundus ferrooxydans PV-1]
Length = 711
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 178/287 (62%), Gaps = 14/287 (4%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
A+ A AH GQ+R+SGDPY+ H + A +LA++G + V LLHDT++D + I
Sbjct: 26 AYVFAAHAHAGQVRSSGDPYITHPLAVAGILASLGMDEASVITALLHDTVEDTGVKLSEI 85
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
FGA VA LV+GV+K+ Q+ + +S+ +A+ M LA A D R +++KLAD
Sbjct: 86 EENFGADVARLVDGVTKIGQI------HFNSSEHKQAENFRKMILATAKDLRVLIVKLAD 139
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHNM TL +P KR+R +ETL+I+ PLA+RLG+ K ++E+L F HL P+ + L
Sbjct: 140 RLHNMRTLGFVPEHKRRRIGEETLQIYAPLAHRLGMHWIKQEMEDLVFSHLEPEAYKALM 199
Query: 415 SKLVECFDEAMVTSAIEKLE----QALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
++ + M+ E+LE +AL+ K ++ V GR K LYSIH KM +K + D+
Sbjct: 200 VEMQGRLE--MLNQTRERLEMLIQEALQRKGLAATV-HGRMKHLYSIHEKMQRKHVNFDD 256
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I D+ R+IV++ + CYQAL +VH L+ VPG+ KDYI PK NGY
Sbjct: 257 IFDLIAFRVIVDDAQTCYQALGIVHSLYRPVPGRFKDYIALPKPNGY 303
>gi|336114504|ref|YP_004569271.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 2-6]
gi|335367934|gb|AEH53885.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 2-6]
Length = 723
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 175/281 (62%), Gaps = 10/281 (3%)
Query: 240 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 299
A +AH GQ R SG+PY++H ++ A +LA + + + VAAG LHD ++D ++ D + F
Sbjct: 29 ASKAHEGQKRKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTDVTLDELREEF 88
Query: 300 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHN 358
VA LV+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHN
Sbjct: 89 NDEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHN 142
Query: 359 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--K 416
M TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K
Sbjct: 143 MRTLKHLPPEKQRRIANETLEIFAPLAHRLGISAIKWELEDTSLRYLNPQQYYRIVNLMK 202
Query: 417 LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 476
E + + IE++++ L D I + GR K +YSI+ KM+++ +EI+D+
Sbjct: 203 RKRAEREQYLQNVIEEVKERLADIRIKSEI-SGRPKHIYSIYRKMVQQHKQFNEIYDLLA 261
Query: 477 LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+R+IV++ +DCY L V+H W +PG+ KDYI PK N Y
Sbjct: 262 VRIIVKSIKDCYAVLGVIHTCWKPMPGRFKDYIAMPKPNMY 302
>gi|325846553|ref|ZP_08169468.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481311|gb|EGC84352.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 726
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 182/292 (62%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ AE HRGQ R SG+ Y +H + A ++ + + + AGL+HD L+D +
Sbjct: 26 DLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S D + FG + LV+GV+KL +L+ RE +A+ + M LAM+ D R +L
Sbjct: 86 SKDQMRDLFGEEITFLVDGVTKLKKLNYKTREEK------QAENIRKMVLAMSNDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P++
Sbjct: 140 IKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEE 199
Query: 410 HTELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ EL+ +K E E + I+ L+++L I++ + GR K L+SI+ KM + K
Sbjct: 200 YYELAQMVHNKRRE--RENYINEIIDTLDKSLSSSKINYEI-SGRPKGLFSIYKKMSRNK 256
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V+ DCY+ L VH +W +P ++KDYI +PK NGY
Sbjct: 257 IEFNEIYDLTAVRVLVDTVADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGY 308
>gi|257090255|ref|ZP_05584616.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
gi|312902753|ref|ZP_07761957.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
gi|422690313|ref|ZP_16748370.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
gi|422702134|ref|ZP_16759974.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
gi|256999067|gb|EEU85587.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
gi|310633807|gb|EFQ17090.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
gi|315169383|gb|EFU13400.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
gi|315576684|gb|EFU88875.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
Length = 737
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG +A LV+GV+KL ++ + E A M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLAENH------RKMLLAMAQDLRVIM 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + + D EA V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMY 308
>gi|290968824|ref|ZP_06560361.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
gi|290781120|gb|EFD93711.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
Length = 733
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 177/286 (61%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KAF A AH+ Q R SG+ Y++H + A +LA + ++T + A LLHD ++D D
Sbjct: 32 KAFLLAADAHKDQRRVSGEWYIVHPLAVAQILADMKIDATTITASLLHDVVEDTAYMLDD 91
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I FG VA LV+GV+KL++L +E+ + + + MFLAMA D R V+IKLA
Sbjct: 92 IENLFGKEVAFLVDGVTKLNRLDYRTKEDQ------QINSMRKMFLAMAKDVRVVVIKLA 145
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K++R ++ETLEIF PLA+RLGI K +LE+L F++L PD++ +L
Sbjct: 146 DRLHNMRTLRFMRSDKQKRISQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDL 205
Query: 414 SSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + E +V AIE L +AL +I F + GR K YSI+ KM K + ++
Sbjct: 206 VDQMKQKRHVREEIVNEAIEVLRKALTASHIQFEI-NGRPKHFYSIYKKMKKDNRDLSQV 264
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+Y +R+IV+ +DCY L +VH LW +P + KDYI PK N Y
Sbjct: 265 YDLYAIRIIVDTVQDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNY 310
>gi|88809826|ref|ZP_01125332.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
gi|88786210|gb|EAR17371.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
Length = 777
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 167/277 (60%), Gaps = 9/277 (3%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ + + FG V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPEQLESHFGPEV 139
Query: 304 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 362
LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RGLVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 363 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 420
AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++
Sbjct: 194 GALREEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVATKRS 253
Query: 421 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 480
E + ++ L L + + GR K LY I KM +++ EI+D+ LR++
Sbjct: 254 EREERLGVTVQLLRDRLAAAGLENCDVNGRPKHLYGIWTKMQRQQKAFHEIYDVAALRIL 313
Query: 481 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 314 TPSVEACYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|392426696|ref|YP_006467690.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
acidiphilus SJ4]
gi|391356659|gb|AFM42358.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
acidiphilus SJ4]
Length = 739
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 177/292 (60%), Gaps = 10/292 (3%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + V KA+ AE+AHR Q+R SG+ Y+LH +E A +LA + + +AA LLHD ++D
Sbjct: 18 RLEIVDKAYRFAEKAHRNQLRNSGEDYILHPLEVAQILADLEMDEATIAAALLHDVVEDT 77
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+ I R FG +A LV+GV+KL +++ ++ + + L MFLAMA D R
Sbjct: 78 EYTIADIEREFGPEIALLVDGVTKLGRIAYKSKVEQ------QVENLRKMFLAMAKDIRV 131
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+LIKLADRLHNM TL + K++ A+ETLEIF PLANRLGI K +LE+L F++L P
Sbjct: 132 ILIKLADRLHNMRTLKYHSVEKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLKP 191
Query: 408 DQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
++ +L L EA + I ++ + L + I + + GR K YSI+ KM +
Sbjct: 192 QEYYDLVEGIALKRREREAYINEVIVQMRKRLNEVEI-YADIAGRPKHFYSIYRKMTTQH 250
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ +R+IVE DCY AL ++H LW +PG+ KDYI PK N Y
Sbjct: 251 KELSEIYDLMAIRVIVETVNDCYGALGIIHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|257422238|ref|ZP_05599228.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
gi|422705431|ref|ZP_16763233.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
gi|257164062|gb|EEU94022.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
gi|315157277|gb|EFU01294.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
Length = 737
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG +A LV+GV+KL ++ + E A M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLAENH------RKMLLAMAQDLRVIM 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + + D EA V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMY 308
>gi|149376201|ref|ZP_01893966.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Marinobacter algicola DG893]
gi|149359606|gb|EDM48065.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Marinobacter algicola DG893]
Length = 732
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 178/292 (60%), Gaps = 10/292 (3%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + V +A+Y AE+AH GQMR SGD Y+ H + A +LA++ + + A +LHD ++D
Sbjct: 39 RINQVRRAYYYAEQAHEGQMRKSGDRYITHPLAVARILASLKLDHQSLMAAMLHDVIEDT 98
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+ D + FG VA+LV+GVSKL+Q+ +R +A+ M LAMA D R
Sbjct: 99 GIPKDALAEQFGEDVAELVDGVSKLTQIEFRSRAE------AQAENFQKMTLAMARDIRV 152
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM TL +P KRQR A ETL+I+ P+ANRLG+ + +LE+L F L P
Sbjct: 153 ILVKLADRLHNMRTLGPMPYEKRQRIANETLDIYAPIANRLGMHSICTELEDLGFSSLYP 212
Query: 408 DQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ +S + + ++ KL++ L+++++ +L GR K L SI+ KM K+
Sbjct: 213 MRSKYISKAVAKLRGSHREIIDDIRGKLQEKLEERSLPGRIL-GREKHLNSIYNKMKFKQ 271
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI D+Y R+I + E+DCY+ L VH L+ +PG+ KDYI PK NGY
Sbjct: 272 KSFHEIMDVYAFRIITDTEDDCYRILGAVHSLYKPLPGRFKDYIAMPKANGY 323
>gi|182679397|ref|YP_001833543.1| (p)ppGpp synthetase I SpoT/RelA [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635280|gb|ACB96054.1| (p)ppGpp synthetase I, SpoT/RelA [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 737
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 179/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A +AH Q RASGDPY H +E A +L + + + A +LHDT++D + +
Sbjct: 25 RAYVYAMQAHGLQKRASGDPYFSHPLEVAAILTDMKLDDATIIAAVLHDTIEDTDSTREE 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I R FG + LV+G++KL +L +++ + +A+ + LA+A D R +L+KLA
Sbjct: 85 IDRLFGPAIGKLVDGLTKLKKLDLVSK------RAAQAENFRKLLLAIAEDVRVLLVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL +PL KR R A+ETL+I+ PLA R+G+ + +LENL FKHL P+ + +
Sbjct: 139 DRLHNMRTLHFVPLEKRARVAQETLDIYAPLAGRMGMQHMRDELENLAFKHLMPEAYAMI 198
Query: 414 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+++L + + ++ + E+L + L + I+ V GR K YS+ KM +K ++ +++
Sbjct: 199 AARLEDLRQKNGRIIATIEEELTRELTARGIAAKV-EGRQKQPYSVWRKMERKSISFEQL 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DI+G R+IV N EDCY+ + VVH WA VPG+ KDYI+ PK N Y
Sbjct: 258 SDIFGFRVIVPNIEDCYRVIGVVHTKWAVVPGRFKDYISTPKPNDY 303
>gi|303229459|ref|ZP_07316249.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
gi|302515995|gb|EFL57947.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
Length = 746
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 194/329 (58%), Gaps = 19/329 (5%)
Query: 192 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 251
AL+++ FN E+ + E Y +L + + D ++KAF A++AH GQ RAS
Sbjct: 10 ALVEQKGFNKEEALKE--FMDYVHSYLGDDEC-------DQIMKAFTLADKAHEGQFRAS 60
Query: 252 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 311
G+PY++H + A +LA + + + A LLHD ++D + + I + FGA VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGAEVAFLVDGVT 120
Query: 312 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 370
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 174
Query: 371 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 428
+R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVND 234
Query: 429 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 488
+E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPDCY 293
Query: 489 QALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L + H +W +P + KDYI+ PK N Y
Sbjct: 294 AVLGIAHSIWKPLPYRFKDYISMPKSNMY 322
>gi|226311469|ref|YP_002771363.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
gi|226094417|dbj|BAH42859.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
Length = 723
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 177/292 (60%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ AE+AH GQ+R SG PY++H + A +LA + ++ +AAG LHD ++D +
Sbjct: 22 DLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVTIAAGFLHDVVEDTEI 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D++ FG VA LV+GV+KL ++ ++E A+ M +AMA D R ++
Sbjct: 82 TLDHLREQFGPDVALLVDGVTKLEKIKYKSKEEQL------AENHRKMLVAMAQDIRVIM 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++ + ETLEIF PLA+RLGI++ K +LE+ ++LNP Q
Sbjct: 136 IKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIASVKWELEDTALRYLNPQQ 195
Query: 410 HTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + K VE EA + A + + + L + NI + GR K +YSI KM ++
Sbjct: 196 YYRIVNLMQKKRVE--REAYLNEASDTIREKLGELNIEAEI-SGRPKHIYSIFKKMTRQN 252
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ LR+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 KQFNEIYDLLALRIIVNDIRDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMY 304
>gi|359790208|ref|ZP_09293117.1| GTP pyrophosphokinase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253888|gb|EHK56965.1| GTP pyrophosphokinase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 741
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 176/304 (57%), Gaps = 8/304 (2%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGHQRRASGDPYFSHPLEVAAILTEMHMDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + I FG + LVEG++KL +L +++ K +A+ L
Sbjct: 66 IAVALLHDTIEDTTATRQEIDELFGPDLGKLVEGLTKLKKLDLVSK------KAEQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TLD +P KR R A+ET+EI+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLDHVPDAKRLRIAEETMEIYAPLAGRMGMQGMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAM-VTSAIEKLEQALKDKNISFLVLCGRHKS 453
+LE L F+++NPD + ++ +L + F V IEK L +K+ V+ R K
Sbjct: 180 EELEELAFRYINPDAYRTVTERLADIFKRNRGVVEEIEKSLSGLFEKHSIEAVVKSRQKK 239
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
+S+ KM K L+ +++ DI+G R+IV EDCY+AL +H W+ VPG+ KDYI+ PK
Sbjct: 240 PWSVFRKMEAKALSFEQLSDIFGFRVIVGTVEDCYRALGAIHTTWSMVPGRFKDYISTPK 299
Query: 514 FNGY 517
N Y
Sbjct: 300 QNDY 303
>gi|242280235|ref|YP_002992364.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio salexigens DSM 2638]
gi|242123129|gb|ACS80825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio salexigens DSM
2638]
Length = 723
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 178/291 (61%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ + RAH GQ+R SG+PYL H + A LLA + + VAAGLLHDT++D
Sbjct: 21 DLIQRAYVFSARAHEGQVRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLHDTVEDTDT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAV 348
+ D I FG VAD+V+GV+K+S + + SK + +A+ + M LAMA D R +
Sbjct: 81 TIDEIADLFGEEVADIVDGVTKISMM-------DFESKAIAKAENIRKMILAMAEDIRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TLD K+ A+ET++I+ PLANRLG+ K LE+LC +L PD
Sbjct: 134 MVKLADRLHNMRTLDFQKSYKQLLIAQETMDIYSPLANRLGLYMVKRDLEDLCLYYLKPD 193
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ +++ L + V + I L L + I + GR K +YSIH KM ++ L
Sbjct: 194 VYQDITDGLERQHTIGKEYVDNVIGLLNGILDNNEIKGTIY-GRTKHIYSIHKKMQRQNL 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++D+++DI R+IVE+ +DCY L +VH +W + GK KDYI+ PK N Y
Sbjct: 253 SLDQVYDIIAFRVIVESVKDCYSVLGLVHSMWKPISGKFKDYISIPKANMY 303
>gi|374297070|ref|YP_005047261.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium clariflavum DSM
19732]
gi|359826564|gb|AEV69337.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium clariflavum DSM
19732]
Length = 725
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 182/288 (63%), Gaps = 14/288 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ ++ AH GQ R SG+P+++H +E A +LA + + T + AG+LHDT++D +Y+
Sbjct: 26 KAYQVSKEAHNGQQRVSGEPFIMHPMEVANILAELELDCTAIVAGILHDTIEDTTYTYEQ 85
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ +E +A+ L MFLAM+ D R +LIKLA
Sbjct: 86 LKEKFGEEVALLVDGVTKLGKIPYTTKEEQ------QAENLRKMFLAMSKDIRVILIKLA 139
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K+ AKETLEI+ P+A+RLGIS K +LE+L ++L+P + +L
Sbjct: 140 DRLHNMRTLKYMSPEKQIEKAKETLEIYAPIAHRLGISKIKWELEDLSLRYLDPKGYYDL 199
Query: 414 SSKLVECFDEAMVTSAIEKLEQALKDKNISFL----VLCGRHKSLYSIHCKMLKKKLTMD 469
K+ E + IEK+ LK+K IS L L GR K YSI+ KM ++ T+D
Sbjct: 200 VDKIANKRRER--EAYIEKILATLKEK-ISELGIQVRLDGRPKHFYSIYRKMQQQNKTLD 256
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D++ R+IV+ +DCY L +VH+++ +PG+ KDYI PK N Y
Sbjct: 257 QIYDLFAFRVIVDTVKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMY 304
>gi|124267906|ref|YP_001021910.1| GTP diphosphokinase [Methylibium petroleiphilum PM1]
gi|124260681|gb|ABM95675.1| GTP diphosphokinase [Methylibium petroleiphilum PM1]
Length = 763
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 188/321 (58%), Gaps = 15/321 (4%)
Query: 205 IVEGNLETYAKEFLANAQLKHKIFREDF-----VIKAFYEAERAHRGQMRASGDPYLLHC 259
+ E + T E + A L HK+ D V +A+ A+ AH GQ RASG+PY+ H
Sbjct: 27 VAEQDAATSDAEAASFAALTHKLSYLDAADIKRVREAYKFADEAHLGQFRASGEPYITHP 86
Query: 260 VETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKL 319
+ A L A ++ + A L+HD ++D + + FGA ADLV+G++KL +L
Sbjct: 87 IAVAGLCADWKLDAQAIMAALMHDAMEDCGIGKAELIERFGAPTADLVDGLTKLDKLQFS 146
Query: 320 ARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETL 378
RE + +A+ M LAMA D R +L+KLADRLHNM T+DA+ KR+R A+ET+
Sbjct: 147 TREES------QAESFRKMLLAMARDVRVILVKLADRLHNMRTIDAMLPVKRERIARETI 200
Query: 379 EIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQA 436
EI+ P+A+RLG++ QL+ L F+ L P +H LS ++ +V + +A
Sbjct: 201 EIYAPIAHRLGLNETYRQLQELSFQQLRPWRHAALSKAVLRARGNRRDIVERVQRDVVKA 260
Query: 437 LKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQ 496
K+ ++ V GR K+++SI+ KM +K+L+ ++ DI+G R++V +CY AL V+HQ
Sbjct: 261 FKEAKLAVQV-SGREKTIFSIYNKMDEKRLSFAQVSDIFGFRIVVNTLPECYLALGVLHQ 319
Query: 497 LWAEVPGKMKDYITRPKFNGY 517
L+ VPG+ KDYI PK NGY
Sbjct: 320 LYKPVPGRFKDYIAIPKANGY 340
>gi|291518572|emb|CBK73793.1| (p)ppGpp synthetase, RelA/SpoT family [Butyrivibrio fibrisolvens
16/4]
Length = 767
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 188/313 (60%), Gaps = 11/313 (3%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
N + KE + + H + K + A AH GQ R SG+PY++H + A++LA
Sbjct: 31 NPDELYKELIERVRKYHPNTDISMIEKGYLIARNAHEGQCRKSGEPYIIHPLCVAIILAD 90
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
+ + + AGLLHD ++D + + I + F VA+LV+GV+KL QL N A K
Sbjct: 91 LELDKETIVAGLLHDVVEDTICTKEEIAQEFSEEVAELVDGVTKLGQL------NYDADK 144
Query: 329 T-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 386
++A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET+EI+ PLA
Sbjct: 145 VEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMEIYAPLAQ 204
Query: 387 RLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISF 444
RLGIS K++L++L K+L PD + +L K L + + S ++ + + + I
Sbjct: 205 RLGISKVKIELDDLSLKYLEPDAYYDLVEKIALRKSQRTDYINSLVDDVRKHIDAAEIQA 264
Query: 445 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 504
V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+
Sbjct: 265 EVY-GRAKHFFSIYKKMVNQHKTIDQIYDLFAVRIIVDSIKDCYAALGVIHEMYTPIPGR 323
Query: 505 MKDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 324 FKDYIAMPKPNMY 336
>gi|398813763|ref|ZP_10572455.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
gi|398038063|gb|EJL31236.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
Length = 723
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 177/292 (60%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ AE+AH GQ+R SG PY++H + A +LA + ++ +AAG LHD ++D +
Sbjct: 22 DLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVTIAAGFLHDVVEDTEI 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D++ FG VA LV+GV+KL ++ ++E A+ M +AMA D R ++
Sbjct: 82 TLDHLREQFGPDVALLVDGVTKLEKIKYKSKEEQL------AENHRKMLVAMAQDIRVIM 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++ + ETLEIF PLA+RLGI++ K +LE+ ++LNP Q
Sbjct: 136 IKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIASVKWELEDTALRYLNPQQ 195
Query: 410 HTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + K VE EA + A + + + L + NI + GR K +YSI KM ++
Sbjct: 196 YYRIVNLMQKKRVE--REAYLNEASDTIREKLGELNIEAEI-SGRPKHIYSIFKKMTRQN 252
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ LR+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 KQFNEIYDLLALRIIVNDIRDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMY 304
>gi|91774406|ref|YP_544162.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
gi|91708393|gb|ABE48321.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
Length = 740
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + A+ + AH GQ+R SG+PY+ H V A +LA + + + A LLHD ++D +
Sbjct: 42 DHIWDAYRFSAAAHEGQVRRSGEPYVTHPVSVAGILAELHLDPPTLIAALLHDVVEDTGV 101
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ I FG VA+LV+G+SKL ++ E +A++ +A+ M LAM+ D R +L
Sbjct: 102 TKQEISDRFGKQVAELVDGLSKLDKI-----EFQSATQA-QAENFRKMLLAMSQDVRVIL 155
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TLD + K++R A+ETL+I+ P+ANRLG++ LE+L FK+L P +
Sbjct: 156 VKLADRLHNMSTLDVMKPEKQRRIARETLDIYAPIANRLGLNEIYQTLEDLSFKYLYPMR 215
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H +S ++ + +V ++ + Q LK++NI V GR K LYSI+ KM K +T
Sbjct: 216 HRVISKAVMAARGNRKEVVGKILDAINQRLKEQNIEAEV-TGREKHLYSIYKKMTGKTIT 274
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+DIYG R+IV + CY AL V+H L+ +PGK KDYI PK NGY
Sbjct: 275 FSQIYDIYGFRVIVRDLPTCYAALGVLHGLYKPIPGKFKDYIAIPKANGY 324
>gi|428320218|ref|YP_007118100.1| (p)ppGpp synthetase I, SpoT/RelA [Oscillatoria nigro-viridis PCC
7112]
gi|428243898|gb|AFZ09684.1| (p)ppGpp synthetase I, SpoT/RelA [Oscillatoria nigro-viridis PCC
7112]
Length = 756
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 179/292 (61%), Gaps = 11/292 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
+ + +AF A H GQ R SG+PY+ H V A +L +G N+ ++AAG LHD ++D
Sbjct: 43 DSLICRAFEFARDLHEGQYRKSGEPYICHPVAVAGILRYMGGNNVMIAAGFLHDIVEDTD 102
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARA 347
++ + I + FGA V LVEGV+KLS+ N +SKT A+ MFLAMA D R
Sbjct: 103 ITLEEIEQRFGAEVRQLVEGVTKLSKF-------NFSSKTERLAENFRRMFLAMAKDIRV 155
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+++KLADRLHNM TL+ L K++ A ET +IF PLANRLGI +K +LE+L FK+L P
Sbjct: 156 IVVKLADRLHNMRTLEHLSEEKQRSIALETRDIFAPLANRLGIGRFKWELEDLAFKYLEP 215
Query: 408 DQHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + E+ + V+ D E + + L + L + I + GR K LY I+ KM +++
Sbjct: 216 EAYREIQELVAVKRADRETQLAEVTDCLRERLDNLGIKCYEVSGRPKHLYGIYAKMQRRQ 275
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++++DI +R+IVE +DCY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 276 KGFNQVYDIAAVRIIVETNDDCYRALAIVHDSFRPIPGRFKDYIGLPKANRY 327
>gi|427706762|ref|YP_007049139.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc sp. PCC 7107]
gi|427359267|gb|AFY41989.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc sp. PCC 7107]
Length = 756
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 175/290 (60%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H GQ R SG+PY+ H V A LL +G + ++AAG LHD ++D ++
Sbjct: 42 LICRAFTFAYQLHHGQFRKSGEPYICHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 101
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FG+ V LVEGV+KLS++ N SKT +A+ MFLAMA D R ++
Sbjct: 102 IEEIEELFGSEVRLLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIV 154
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 155 VKLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPEA 214
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
++ + E E + A E L + L I L + GR K LYSI+ KM +++
Sbjct: 215 FRQMQQHVSEKRTAREEKLAKATEILRERLPHAGIHCLDISGRPKHLYSIYQKMQRQQKE 274
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 275 FHEIYDLAALRIIVQTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 324
>gi|392394513|ref|YP_006431115.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525591|gb|AFM01322.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 726
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 180/298 (60%), Gaps = 12/298 (4%)
Query: 225 HKIFRE--DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLH 282
HK+ E V KA+ AE AHRGQ+R SG+ Y+ H +E A +L+ + + +AA LH
Sbjct: 11 HKVSPEGIKLVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILSELEMDEATIAAAFLH 70
Query: 283 DTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM 342
D ++D + + I R FG+ VA LV+GV+KL ++ ++E ++ + L MFLAM
Sbjct: 71 DVVEDTKYTIEDIEREFGSQVAILVDGVTKLGRIEYKSKEE------LQVENLRKMFLAM 124
Query: 343 A-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLC 401
A D R +LIKLADRLHNM TL K++ A+ETLEIF PLANRLGI K +LE+L
Sbjct: 125 AKDIRVILIKLADRLHNMRTLKFHSEKKQKEIAQETLEIFAPLANRLGIFRIKWELEDLS 184
Query: 402 FKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHC 459
F++L P ++ +LS L E + I +L + L + I + GR K YSI+
Sbjct: 185 FRYLKPQEYYDLSEGIALKRAEREVQINEVITQLSKRLTEVGIKADI-SGRPKHFYSIYR 243
Query: 460 KMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
KM+ + + EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI PK N Y
Sbjct: 244 KMITQHRELSEIYDLTAVRVIVDSVNDCYGALGIIHTMWKPLPGRFKDYIAMPKPNMY 301
>gi|357057600|ref|ZP_09118458.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
43532]
gi|355374848|gb|EHG22139.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
43532]
Length = 743
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 178/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AE+AH GQ+R SGD Y++H + A +L + + + A LLHD ++D + +
Sbjct: 32 KAYDCAEKAHSGQVRISGDAYIVHPLNVAYILTGLHLDDETICAALLHDVVEDTCATLEE 91
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG + +L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLA
Sbjct: 92 MDAEFGRNIMELIDGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIKLA 145
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + KRQR AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ + L
Sbjct: 146 DRLHNMRTLKYMREDKRQRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYYAL 205
Query: 414 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ E + +I ++ + L+ I + GR K YSI+ KM + ++ EI
Sbjct: 206 VEEVKHKRQERQEFIRESIRQIREKLEAAGIEAEI-KGRAKHFYSIYRKMKRDNKSVSEI 264
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGY
Sbjct: 265 YDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGY 310
>gi|164687521|ref|ZP_02211549.1| hypothetical protein CLOBAR_01162 [Clostridium bartlettii DSM
16795]
gi|164603295|gb|EDQ96760.1| RelA/SpoT family protein [Clostridium bartlettii DSM 16795]
Length = 736
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 181/289 (62%), Gaps = 12/289 (4%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
VIKA+ A+ AH G R SG+PY++H + A +LA + + V+AAGLLHD ++D +Y
Sbjct: 25 VIKAYELAKSAHAGVFRKSGEPYIIHPIAVANILADLELDMEVIAAGLLHDVVEDTPYTY 84
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I FG +ADLV+GV+KL ++ +E + +A+ L MFLAMA D R +LIK
Sbjct: 85 EDIKELFGKDIADLVDGVTKLGKIKYQTKEES------QAENLRKMFLAMAKDIRVILIK 138
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL +P K + AKETLEI+ +A+R+GIS K +LE+L K+++P+ +
Sbjct: 139 LADRLHNMRTLKYMPEEKAKYKAKETLEIYGGIAHRIGISKIKWELEDLALKYIDPEGYR 198
Query: 412 ELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLC---GRHKSLYSIHCKMLKKKLTM 468
EL+ K+ + I+K+ + L+DK + C GR K YSI+ KM KK T
Sbjct: 199 ELAEKI--TMKRSQRQEYIDKIVRLLQDKFKEVDIDCEVSGRPKHFYSIYKKMKKKHKTF 256
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV +DCY L +VH +W +PG+ KDYI PK N Y
Sbjct: 257 EEIYDLTAVRIIVNTIKDCYAVLGMVHTMWIPMPGRFKDYIAMPKPNLY 305
>gi|336437345|ref|ZP_08617051.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336005471|gb|EGN35516.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 767
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 183/289 (63%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH GQ+R SG+PY++H + ++LA + + + AG+LHD ++D ++
Sbjct: 53 LIEKAYKTANEAHNGQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMT 112
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FG VA LV+GV+KL QLS + ++A+ L MFLAMA D R ++I
Sbjct: 113 LDDVSREFGEEVALLVDGVTKLGQLS-----YSQDKLEIQAENLRKMFLAMAKDIRVIII 167
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ + K++ AKET++I+ P+A RLGIS K++L++L K+ P+ +
Sbjct: 168 KLADRLHNMRTLEFMRPEKQKEKAKETMDIYAPIAQRLGISKIKIELDDLSLKYSQPEVY 227
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L L E E V + ++ +K+ +I V GR K +SI+ KM+ + T+
Sbjct: 228 QQLVHDLNERKTKREEFVQQIVSEVSTHMKNAHIQAKVY-GRVKHFFSIYKKMVNQNKTL 286
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+++D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 287 DQVYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMY 335
>gi|209964801|ref|YP_002297716.1| guanosine polyphosphate phosphohydrolase [Rhodospirillum centenum
SW]
gi|209958267|gb|ACI98903.1| guanosine polyphosphate phosphohydrolase [Rhodospirillum centenum
SW]
Length = 733
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 171/292 (58%), Gaps = 4/292 (1%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + KA+ +AH Q RASGDPY H + A LL + ++ + LLHDT++D
Sbjct: 28 EDALNKAYVFTIKAHGSQTRASGDPYFTHPIWVAYLLTELKLDTASIITALLHDTVEDTL 87
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
S I R FG VA LV+GV+KLS++ + + +A+ + LAM+ D R +
Sbjct: 88 TSLQEIQRAFGPDVARLVDGVTKLSRIELQHTGTPQSDQQKQAENFRKLVLAMSEDIRVL 147
Query: 349 LIKLADRLHNMMTLDALP-LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
L+KLADRLHNM TL + KR+R A+ET+EI+ PLA R+GI WK +LE L F+ LNP
Sbjct: 148 LVKLADRLHNMQTLHYIKNPDKRRRIARETIEIYAPLAERIGIQRWKDELEELAFQELNP 207
Query: 408 DQHTELSSKLVECFDEAM--VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + +L ++ V I++LE+ + + + GR K+ YSI KM +K
Sbjct: 208 EAFASIRGRLERLEEDGAGGVDRIIKELEETVHSAGLQTATVSGRRKAPYSIWRKMQRKN 267
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+ R++V+ E CYQAL V+H + VPG+ KDYI+ PK NGY
Sbjct: 268 VAFEQLSDVMAFRIVVDTVEHCYQALGVIHAKYPVVPGRFKDYISTPKPNGY 319
>gi|433463434|ref|ZP_20420988.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
gi|432187529|gb|ELK44809.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
Length = 734
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ +A+ AE+AH Q R SG+PY++H ++ A +L + + VA G LHD ++D ++
Sbjct: 27 FIRRAYEFAEKAHSNQFRKSGEPYIIHPIQVAGILVNLEMDPETVAGGFLHDVVEDTDIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LEEIGDAFNTEVAMLVDGVTKLGKIKYKSKEAQ------QAENHRKMFVAMAKDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + +E + I +++ L D NI L GR K LYSI+ KM+ +
Sbjct: 201 YRIVHLMKQKRNEREHYIEEVINEIQTQLDDVNIQ-ADLNGRPKHLYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+ VE+ +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRITVESIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLY 308
>gi|383781444|ref|YP_005466011.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
gi|381374677|dbj|BAL91495.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
Length = 830
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 174/286 (60%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KAF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 128 KAFDVAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQ 187
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FGA VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 188 MRNDFGAEVALLVDGVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 239
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 240 DRLHNMRTLTFLPRAKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 299
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E EA++ ++ LK I GR K LYSI+ KM+ + ++I
Sbjct: 300 NRLIGEHQPQREALLRQVTNRVSLDLKSAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 358
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 359 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 404
>gi|452994812|emb|CCQ93581.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 721
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 188/289 (65%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+IKA+ AE +H+GQ+R SG+ Y +H AM+LA + + T + AGLLHD L+D +S
Sbjct: 20 MIIKAYNFAEYSHQGQLRNSGEIYFVHPFNVAMILADLNMDGTTIVAGLLHDVLEDTSVS 79
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ + + FG VA+LV+GV+KL +L ++ + +A+ L M +AMA D R ++I
Sbjct: 80 YETLVKEFGEEVANLVDGVTKLKKLKYKTKQES------QAENLRKMVMAMAKDIRVIII 133
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ + K++ A ETLEI+ PLA+RLGIS K +LE+L ++L+P+ +
Sbjct: 134 KLADRLHNMRTLEYMSEEKKKEKALETLEIYAPLAHRLGISKIKWELEDLSLRYLDPEGY 193
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L K+ + EA + I+++++ L++ NI F + GR KS YSI+ KM+ + +
Sbjct: 194 YDLVDKVSKRRKEREAYIQRIIDEIDEKLEEMNI-FRDISGRPKSFYSIYKKMVYQNKSF 252
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I D+ +R+IV+ +DCY L +VH +W +PG+ KDYI PK N Y
Sbjct: 253 EQIFDLTAIRVIVDTIKDCYGVLGIVHTMWKPIPGRFKDYIAMPKPNMY 301
>gi|404328487|ref|ZP_10968935.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 724
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A++AH GQ+R SG+PY+ H VE A +L + + T + +G LHD ++D +
Sbjct: 20 ELIKKAYEYAKKAHAGQLRKSGEPYITHPVEVAGILVNLKMDVTTIMSGFLHDVVEDTPV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA LV+GV+KL ++E+ +A+ MF+AMA D R V+
Sbjct: 80 TLDDVRNEFGDNVAMLVDGVTKLRHFEYSSKEDQ------QAENHRKMFVAMARDLRCVI 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL + K+ + A ET+EIF PLANRLGIS K +LE++ ++LNP Q
Sbjct: 134 VKLADRLHNMRTLKYMTKEKQIQKANETMEIFAPLANRLGISAIKWELEDISLRYLNPQQ 193
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ + + + + EA + +E L++ +K +I + GR K +YSI+ KM+ +
Sbjct: 194 YYKIVNLMKQKREEREAYIAQVVEDLKKYVKSVHIKAEI-SGRPKHIYSIYRKMVNQHKQ 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D++ +R+IVE+ +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 253 FNEIYDLFAVRIIVESIKDCYAILGIIHTHWKPMPGRFKDYIAMPKANMY 302
>gi|295695639|ref|YP_003588877.1| (p)ppGpp synthetase I SpoT/RelA [Kyrpidia tusciae DSM 2912]
gi|295411241|gb|ADG05733.1| (p)ppGpp synthetase I, SpoT/RelA [Kyrpidia tusciae DSM 2912]
Length = 739
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 176/286 (61%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A+ AH GQ R+SG+ Y+LH + +LA + + T + A LLHD ++D ++ +
Sbjct: 46 EAYTLAKAAHAGQKRSSGEDYILHPIAVTEILADLHLDGTTLTAALLHDVVEDTPVTLEE 105
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I + FG V LV+GV+KL ++ RE +A+ L M LAMA D R +LIKLA
Sbjct: 106 IGKRFGPEVVALVDGVTKLRRIQYATREEQ------QAENLRKMLLAMAKDIRVILIKLA 159
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL +P K+ R AKETLEIF PLA+RLGIS + +LE+L ++LNP Q+ +
Sbjct: 160 DRLHNMRTLRHVPEQKQMRIAKETLEIFAPLAHRLGISRIQWELEDLALRYLNPQQYYRI 219
Query: 414 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + + EA + I+ L + + NI + GR K +YS++ KM+ + EI
Sbjct: 220 ANLMTKKRREREAYIQKVIDTLREKFVELNIKADI-SGRPKHIYSVYRKMVNQNKQFGEI 278
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ +R+IV+N +DCY L VVH LW +PG+ KDYI PK N Y
Sbjct: 279 YDLLAVRVIVDNIKDCYAILGVVHTLWRPLPGRFKDYIAMPKPNMY 324
>gi|297616954|ref|YP_003702113.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
gi|297144791|gb|ADI01548.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
Length = 724
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 178/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQ R SG+PY+ H + A++LA + ++ + A LLHD ++D ++ +
Sbjct: 24 RAYAFAEKAHAGQTRISGEPYVCHPLAVAIILAELELDAATLIAALLHDVVEDTEVTLEE 83
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL +L +++E +A+ L MFLAMA D R ++IKLA
Sbjct: 84 VKLQFGEEVALLVDGVTKLGKLEFMSKEE------AQAENLRKMFLAMAKDIRVLIIKLA 137
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL P K+ A+ETLEIFVPLA+RLGI +K +LE+L F +L PD + EL
Sbjct: 138 DRLHNMRTLVYQPERKQVEIAEETLEIFVPLAHRLGIFRFKWELEDLSFLYLEPDTYYEL 197
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ +L E V I ++ L+ I + GR K+LYSI+ KMLK+ +DEI
Sbjct: 198 ARRLKAKRKEREEYVHELIARIRAELQKIGIEADI-AGRPKNLYSIYTKMLKQGKDLDEI 256
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D +R++V+ DCY L ++H LW +PG+ KDYI PK N Y
Sbjct: 257 YDKIAIRVLVDTVRDCYGVLGIIHTLWKPLPGRFKDYIAMPKPNMY 302
>gi|312874138|ref|ZP_07734172.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
gi|311090208|gb|EFQ48618.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
Length = 750
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGY 310
>gi|428779441|ref|YP_007171227.1| RelA/SpoT family (p)ppGpp synthetase [Dactylococcopsis salina PCC
8305]
gi|428693720|gb|AFZ49870.1| (p)ppGpp synthetase, RelA/SpoT family [Dactylococcopsis salina PCC
8305]
Length = 762
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 180/305 (59%), Gaps = 13/305 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ AF A H GQ R SG+PY+ H V A L+ +G S ++ AG LHD ++D ++
Sbjct: 47 LIADAFQFAYELHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIGAGFLHDIVEDTEVT 106
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 107 CEEIEERFGESVRHLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 159
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL L K+++ A ET EIF PLANRLGI ++K +LE+L FK+L P+
Sbjct: 160 VKLADRLHNMRTLQHLKPEKQKQIALETREIFAPLANRLGIGSFKWELEDLSFKYLEPEA 219
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
E+ + + E + + E L++ I L GR K LY I+ KM +++ T
Sbjct: 220 FQEIRELVADRRTDREKRIQTVTEALQKRFDQGGIEVEELKGRPKHLYGIYQKMQQQQKT 279
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY--IFSQVVLS 525
EI+D+ G+R+I++ EDCY+AL ++H + +PG+ KDYI PK N Y + + V+
Sbjct: 280 FAEIYDLAGVRVILKTREDCYRALAIIHDEFKPIPGRFKDYIGLPKPNRYQSLHTTVIGG 339
Query: 526 YERNI 530
Y + I
Sbjct: 340 YGKPI 344
>gi|115374167|ref|ZP_01461454.1| RelA/SpoT family protein [Stigmatella aurantiaca DW4/3-1]
gi|310820896|ref|YP_003953254.1| GTP pyrophosphokinase [Stigmatella aurantiaca DW4/3-1]
gi|115368834|gb|EAU67782.1| RelA/SpoT family protein [Stigmatella aurantiaca DW4/3-1]
gi|309393968|gb|ADO71427.1| GTP pyrophosphokinase [Stigmatella aurantiaca DW4/3-1]
Length = 734
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 176/294 (59%), Gaps = 15/294 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +LA + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILAELKLDEASIVTGLLHDTIEDTLA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG V+ LV+GV+KLS+ S A + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGPEVSQLVDGVTKLSKFSASA---TLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P
Sbjct: 138 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQD 197
Query: 410 HTELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ L KL E + E T KLE+ + +S GR K +YSI+ K+
Sbjct: 198 YFSLLEKLNRRKKEREKYIEDTSTLVRSKLEERNLEGEVS-----GRFKHVYSIYKKIKA 252
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ + D+IHDI RL++ CY+AL +VHQLW VPG+ KD+I PK N Y
Sbjct: 253 QGIEFDQIHDIIAFRLLMPTVPSCYEALGLVHQLWKPVPGRFKDFIAIPKPNMY 306
>gi|349611483|ref|ZP_08890718.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
gi|348608576|gb|EGY58556.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
Length = 750
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGY 310
>gi|386851465|ref|YP_006269478.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
gi|359838969|gb|AEV87410.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
Length = 810
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 174/286 (60%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KAF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 108 KAFDVAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQ 167
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FGA VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 168 MRNDFGAEVALLVDGVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 219
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 220 DRLHNMRTLTFLPRAKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 279
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E EA++ ++ LK I GR K LYSI+ KM+ + ++I
Sbjct: 280 NRLIGEHQPQREALLRQVTNRVSLDLKSAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 338
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 339 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 384
>gi|163782986|ref|ZP_02177981.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881666|gb|EDP75175.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
Length = 702
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 179/292 (61%), Gaps = 13/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF H GQ+R SG+PY++H +E A LA + +ST V AGLLHDTL+D
Sbjct: 24 DIIHRAFEFVSEKHSGQLRKSGEPYVIHPLEVAKTLAELNMDSTTVIAGLLHDTLEDTDT 83
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLS-KLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+Y+ I FG VAD+VEGV+K+ ++ K RE +A+ + LA A D R V
Sbjct: 84 TYEEIEELFGKDVADIVEGVTKIGKIKFKNLRE-------AQAENFRKLILATAKDIRVV 136
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ L KR R A+ETLE++ P+A+RLGI K LE+L FK+L P
Sbjct: 137 VVKLADRLHNMKTLNHLRRDKRIRIAEETLEVYAPIAHRLGIWEIKRSLEDLSFKYLYPK 196
Query: 409 QHTELS---SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
++ + S+ +E + + I K+ + +K I V R K LYSI K ++K
Sbjct: 197 EYERVRKFVSQSLEDLEVYLKKFVIPKVREEIKKAGIKAEVTY-RPKHLYSIWQKTIRKN 255
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ ++E+HD+ G+R+IV+ ++CY L ++H L+ VPGK KDYI+ PK N Y
Sbjct: 256 IGLEEVHDLLGVRIIVDTIQECYVVLGLIHSLFKPVPGKFKDYISLPKPNLY 307
>gi|170732313|ref|YP_001764260.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia MC0-3]
gi|169815555|gb|ACA90138.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia MC0-3]
Length = 788
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 184/305 (60%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+LA ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLAPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKNELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YS++ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|146296035|ref|YP_001179806.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409611|gb|ABP66615.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 722
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 183/290 (63%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A++ H GQ R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 22 NLIKKAYEFAKKYHDGQERSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S I + FG +A LV+GV+KL +L T+ +A+ M +AMA D R +L
Sbjct: 82 SPQEIEQEFGGEIASLVDGVTKLGKLE------FTSKLEQQAENYRKMLIAMAKDIRVIL 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+P+
Sbjct: 136 IKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLALRYLDPEG 195
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++ T
Sbjct: 196 YYDLVEKIAKKRVEREEYIQRIINLISEKLKEANIEVGQIDGRPKHFYSIYRKMKQQGKT 255
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N Y
Sbjct: 256 LEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMY 305
>gi|107022080|ref|YP_620407.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia AU 1054]
gi|116689024|ref|YP_834647.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia HI2424]
gi|254246040|ref|ZP_04939361.1| RelA/SpoT protein [Burkholderia cenocepacia PC184]
gi|105892269|gb|ABF75434.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia AU 1054]
gi|116647113|gb|ABK07754.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia HI2424]
gi|124870816|gb|EAY62532.1| RelA/SpoT protein [Burkholderia cenocepacia PC184]
Length = 788
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 184/305 (60%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+LA ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLAPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKNELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YS++ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|258515502|ref|YP_003191724.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
gi|257779207|gb|ACV63101.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
Length = 727
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 178/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ KA+ AE AHR Q R SG+PY+ H + A +LA + + +A LLHD ++D ++
Sbjct: 19 FLRKAYNVAEAAHRNQWRISGEPYIFHPLAVAKILADLELDIEALAGALLHDVVEDTEIT 78
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I + FG+ VA LV+GV+KLS++ ++E + +A+ L MFLAMA D R +LI
Sbjct: 79 LQDIEKDFGSEVALLVDGVTKLSKIDFKSKEEH------QAENLRKMFLAMAKDIRVILI 132
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHN+ TL A P K++ A ETLEIF PLA+RLGI K ++E+L F+ L P ++
Sbjct: 133 KLADRLHNLRTLGAQPEAKQKEIALETLEIFAPLAHRLGIYHLKWEIEDLAFRFLQPSKY 192
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
EL+ K+ + + E + IE L++ D I + GR K LYSI+ KM ++K
Sbjct: 193 YELADKVAKTRNKREEDINEIIEVLKKKFIDVGIKADI-QGRPKHLYSIYEKMQRQKKDF 251
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I DI +R+ V+ +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 252 AQILDIMAVRVTVDTVKDCYGTLGIVHTLWKPIPGRFKDYIAMPKSNMY 300
>gi|188585914|ref|YP_001917459.1| (p)ppGpp synthetase I SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350601|gb|ACB84871.1| (p)ppGpp synthetase I, SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 729
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 178/287 (62%), Gaps = 12/287 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A H Q R SG+ Y++H +E A++LA + + ++AGLLHD ++D + +
Sbjct: 30 RAFEFARSYHNDQKRVSGEEYIVHPIEVALVLADLELDLDTISAGLLHDVMEDTPATREE 89
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG + LV+GV+KLS+L+ +E + +A+ L MF AMA D R +LIKLA
Sbjct: 90 LEELFGDEITLLVDGVTKLSRLNFKTKEEH------QAENLRKMFFAMANDIRVILIKLA 143
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL+ LP K++ AKET+EI+ PLANRLGI K +LE+L F+++ P+Q+ L
Sbjct: 144 DRTHNMRTLNYLPERKQKEIAKETMEIYAPLANRLGIYKIKWELEDLAFRYIEPEQYYYL 203
Query: 414 SSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDE 470
+ ++V+ E I+K++ L+DK + + GR K LYSI+ KM K ++E
Sbjct: 204 ADRIVQKRMER--EEYIKKIKVDLRDKLKEMGIDGEIHGRPKHLYSIYSKMKKTGKDLNE 261
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I+D+ LR+IV N +DCY L VH +W VPG+ KDYI PK N Y
Sbjct: 262 IYDLIALRIIVNNVKDCYAVLGTVHTMWKPVPGRFKDYIAVPKSNMY 308
>gi|325912633|ref|ZP_08175016.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
gi|325478054|gb|EGC81183.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
Length = 750
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGY 310
>gi|282853881|ref|ZP_06263218.1| GTP diphosphokinase [Propionibacterium acnes J139]
gi|386071338|ref|YP_005986234.1| GTP pyrophosphokinase [Propionibacterium acnes ATCC 11828]
gi|422390533|ref|ZP_16470628.1| GTP diphosphokinase [Propionibacterium acnes HL103PA1]
gi|422459390|ref|ZP_16536038.1| GTP diphosphokinase [Propionibacterium acnes HL050PA2]
gi|422465021|ref|ZP_16541628.1| GTP diphosphokinase [Propionibacterium acnes HL060PA1]
gi|422465932|ref|ZP_16542508.1| GTP diphosphokinase [Propionibacterium acnes HL110PA4]
gi|422469845|ref|ZP_16546366.1| GTP diphosphokinase [Propionibacterium acnes HL110PA3]
gi|422564622|ref|ZP_16640273.1| GTP diphosphokinase [Propionibacterium acnes HL082PA2]
gi|422575800|ref|ZP_16651338.1| GTP diphosphokinase [Propionibacterium acnes HL001PA1]
gi|282583334|gb|EFB88714.1| GTP diphosphokinase [Propionibacterium acnes J139]
gi|314923577|gb|EFS87408.1| GTP diphosphokinase [Propionibacterium acnes HL001PA1]
gi|314966622|gb|EFT10721.1| GTP diphosphokinase [Propionibacterium acnes HL082PA2]
gi|314981351|gb|EFT25445.1| GTP diphosphokinase [Propionibacterium acnes HL110PA3]
gi|315092017|gb|EFT63993.1| GTP diphosphokinase [Propionibacterium acnes HL110PA4]
gi|315092856|gb|EFT64832.1| GTP diphosphokinase [Propionibacterium acnes HL060PA1]
gi|315103624|gb|EFT75600.1| GTP diphosphokinase [Propionibacterium acnes HL050PA2]
gi|327327446|gb|EGE69222.1| GTP diphosphokinase [Propionibacterium acnes HL103PA1]
gi|353455704|gb|AER06223.1| GTP pyrophosphokinase [Propionibacterium acnes ATCC 11828]
Length = 774
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 172/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVISIVRQDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|296132724|ref|YP_003639971.1| (p)ppGpp synthetase I SpoT/RelA [Thermincola potens JR]
gi|296031302|gb|ADG82070.1| (p)ppGpp synthetase I, SpoT/RelA [Thermincola potens JR]
Length = 722
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 179/295 (60%), Gaps = 18/295 (6%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E F+ + + AE+AH GQ R SG+PY++H + A +LA + + +AAGLLHD ++D
Sbjct: 19 EKFIEETYRFAEKAHEGQTRISGEPYIIHPLSVAHILADLELDVVTIAAGLLHDVVEDTD 78
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I FG +A LV+GV+KLS++S N + VE L MFLAMA D R +
Sbjct: 79 SPLETIEEKFGVEIALLVDGVTKLSRISY----KNKMEQQVE--NLRKMFLAMAKDIRVI 132
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL L K++ ++ETLEIF PLA+RLGI K +LE+L ++L P
Sbjct: 133 LIKLADRLHNMRTLKHLAEPKQKEISEETLEIFAPLAHRLGIFKIKWELEDLALRYLEPK 192
Query: 409 QHTELSSKLVECFDE-----AMVTSAI-EKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
++ EL + + E A VT + EKLE +I GR K YSI+ KML
Sbjct: 193 KYYELVDGIAQKRAEREEYIARVTQILAEKLENVGIKADIQ-----GRPKHFYSIYKKML 247
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ + EI+D+ +R+IV+ +DCY AL ++H LW +PG+ KDYI PK N Y
Sbjct: 248 EQQKELAEIYDLLAVRVIVDTVKDCYGALGIIHTLWKPIPGRFKDYIAMPKSNMY 302
>gi|154247800|ref|YP_001418758.1| (p)ppGpp synthetase I SpoT/RelA [Xanthobacter autotrophicus Py2]
gi|154161885|gb|ABS69101.1| (p)ppGpp synthetase I, SpoT/RelA [Xanthobacter autotrophicus Py2]
Length = 742
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 181/291 (62%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + +A+ A RAH Q+RASGDPY H +E A +L + + + + LLHDT++D
Sbjct: 20 EALLDRAYVYAMRAHGSQLRASGDPYFSHPLEVAAILTDLKLDDATIVSALLHDTIEDTS 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I R FG +A LVEG++K+ +L ++++ +A+ L + LA+AD R +
Sbjct: 80 ATKVEIERLFGHQIATLVEGLTKIKKLDLVSKQAK------QAENLRKLLLAIADDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL +P KR R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P+
Sbjct: 134 LVKLADRLHNMRTLKWVPPEKRDRVAQETLDIYAPLAARMGMQDMREELEDLSFRQLSPE 193
Query: 409 QHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ ++ E + A+V +L+ L+ + I+ V GR K YSI KM +K +
Sbjct: 194 AYESIAERVSELRQGNGAVVQEIERELKDELERRGIAAEV-KGREKRPYSIWGKMERKAI 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ D+YG R+IV + EDCY+AL V+H WA VPG+ KDYI+ PK N Y
Sbjct: 253 GFEQLSDLYGFRVIVGSVEDCYRALGVIHTKWAIVPGRFKDYISTPKPNDY 303
>gi|295130724|ref|YP_003581387.1| GTP Pyrophosphokinase, (p)ppGpp synthetase I [Propionibacterium
acnes SK137]
gi|291376046|gb|ADD99900.1| GTP Pyrophosphokinase, (p)ppGpp synthetase I [Propionibacterium
acnes SK137]
Length = 774
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFCTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|259500575|ref|ZP_05743477.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
gi|302191266|ref|ZP_07267520.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus iners AB-1]
gi|329920168|ref|ZP_08276999.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
gi|259167959|gb|EEW52454.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
gi|328936622|gb|EGG33066.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
Length = 750
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGY 310
>gi|386714927|ref|YP_006181250.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
gi|384074483|emb|CCG45976.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
Length = 734
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ +A+ AE AH Q R SG+PY++H ++ A +L + + +A G LHD ++D +S
Sbjct: 27 FIRRAYQFAEEAHSDQFRKSGEPYIIHPIQVAGILVNLEMDPETIAGGFLHDVVEDTEVS 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + F V+ LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 IEEIEKAFNTEVSMLVDGVTKLGKIKYKSKEAQ------QAENHRKMFVAMAKDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + +E + I+++ LKD NI L GR K LYSI+ KM+ +
Sbjct: 201 YRIVHLMKQKRNEREHYIEEVIDEIRSQLKDVNID-ADLNGRPKHLYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+ V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRITVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLY 308
>gi|325912114|ref|ZP_08174512.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
gi|325476064|gb|EGC79232.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
Length = 750
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 176/291 (60%), Gaps = 12/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGY
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGY 310
>gi|114706256|ref|ZP_01439158.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:TGS domain:RelA/SpoT protein:Metal-dependent
[Fulvimarina pelagi HTCC2506]
gi|114538117|gb|EAU41239.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:TGS domain:RelA/SpoT protein:Metal-dependent
[Fulvimarina pelagi HTCC2506]
Length = 743
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 175/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + +A+ A + H Q RASGDPY H +E A +L + + +A LLHDT++D
Sbjct: 20 EALLNRAYVYAMQKHGAQKRASGDPYFSHPLEVAAILTELRLDEATIATALLHDTIEDTD 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I + FG + LVEG++KL +L +++ + +A+ L + LA+AD R +
Sbjct: 80 ATRKEIDQLFGPRIGQLVEGLTKLKRLDLVSK------RAAQAENLRKLLLAIADDIRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL + KR R A+ETL+I+ PLA R+G+ + +LE+L F+++N +
Sbjct: 134 LVKLADRLHNMRTLGPMRTDKRMRIAQETLDIYAPLAGRMGMQDMREELEDLAFRNVNME 193
Query: 409 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ LS +L E +T E L L+ K I V GR K YS+ KM +KKL
Sbjct: 194 AYETLSERLAELKRRYSGTITKIEEDLTSRLRSKGIDAKV-TGRQKRPYSVFSKMQRKKL 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ DI+G R++V ++EDCY+ L +VH+ W VPG+ KDYI+ PK N Y
Sbjct: 253 SFEQLSDIFGFRVVVASDEDCYRTLGIVHRTWRMVPGRFKDYISTPKQNDY 303
>gi|443290378|ref|ZP_21029472.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Micromonospora
lupini str. Lupac 08]
gi|385886705|emb|CCH17546.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Micromonospora
lupini str. Lupac 08]
Length = 842
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A R H GQ R SGDPY+ H + A +L +G ++T + A LLHDT++D + D
Sbjct: 140 RAFDTAARWHSGQYRKSGDPYITHPLAVATILGNLGMDTTTLVAALLHDTIEDTEYTLDA 199
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 200 MRADFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 251
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 252 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEI 311
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E E+++ +K+ LK I GR K LYSI+ KM+ + ++I
Sbjct: 312 NRLIGEHQPQRESLLRQVTQKVGTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 370
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 371 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 416
>gi|421074132|ref|ZP_15535173.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
gi|392527799|gb|EIW50884.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
Length = 736
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V +A+ A AH+GQ RASG+ Y+ H + A +LA + ++ ++A LLHD ++D S
Sbjct: 27 IVQQAYELAVDAHKGQTRASGEEYICHPLGVAKILAELQIDALTISASLLHDVVEDTAFS 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + + FG VA LV+GV+KLS++ ++E + + MFLAMA D R VLI
Sbjct: 87 LEELEKLFGKEVAMLVDGVTKLSRIEYKSKEEQ------QLENFRKMFLAMAKDIRVVLI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL +P K++R ++ET EIF PLA+RLGIS+ K +LE+L F++L P+++
Sbjct: 141 KLADRLHNMRTLKHMPEHKQRRISQETHEIFAPLAHRLGISSVKWELEDLAFRYLEPEKY 200
Query: 411 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
EL K+ + E ++ AI+ L L D I + GR K YSI+ KMLK +
Sbjct: 201 YELVEKVKQKRREREQLINEAIKILSTRLDDVEIKADI-QGRPKHFYSIYKKMLKGNKDL 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++V+ +DCY AL VVH LW +P + KDYI PK N Y
Sbjct: 260 SEIYDLSAVRILVDTVKDCYGALGVVHTLWKPLPLRFKDYIAMPKSNMY 308
>gi|83858192|ref|ZP_00951714.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Oceanicaulis sp. HTCC2633]
gi|83853015|gb|EAP90867.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Oceanicaulis sp. HTCC2633]
Length = 747
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 180/308 (58%), Gaps = 11/308 (3%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A + +A Q + D + +A+ A +H GQ R SG PY H V AMLLA + +
Sbjct: 19 ADDLVARVQAYYPQADADLIRRAYDFARDSHEGQTRQSGQPYYSHVVAVAMLLAELRLDV 78
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
V GLLHDT++D + + I R FG+ VA LV+GV+KL Q+ +LA + +T +A+
Sbjct: 79 ATVCTGLLHDTVEDTLATLEDIERLFGSDVAKLVDGVTKLGQM-ELA-----SKRTKQAE 132
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLC-KRQRFAKETLEIFVPLANRLGIS 391
L + +A+ D R +L+KL DRLHNM TL +P KR+R A ETLEI+ PLA R+G++
Sbjct: 133 NLQKLVVAITRDVRVLLVKLCDRLHNMRTLHYVPKPEKRERIALETLEIYAPLARRIGVN 192
Query: 392 TWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAI--EKLEQALKDKNISFLVLCG 449
V+LENL FK++NP + ++ +L E + AI L + L + I V G
Sbjct: 193 RVCVELENLSFKNVNPAAYESVTRRLTELRETRADAVAIVSSTLSERLTEAGIECRVF-G 251
Query: 450 RHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYI 509
R K YSI K+ KK ++ D+I DIY R++ E EDCY AL VVH+ W VP + DYI
Sbjct: 252 REKRPYSIWRKLEKKGVSFDDIADIYAFRILTETPEDCYAALGVVHRTWRCVPERFHDYI 311
Query: 510 TRPKFNGY 517
+ PK N Y
Sbjct: 312 STPKPNNY 319
>gi|160878706|ref|YP_001557674.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium phytofermentans ISDg]
gi|160427372|gb|ABX40935.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium phytofermentans ISDg]
Length = 813
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 188/291 (64%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AH+ Q+R SG+PY++H + A++LA + + + AG+LHD ++D L
Sbjct: 98 EIVEKAYKIATFAHKDQLRKSGEPYIIHPLCVAIILAELELDKETIVAGILHDVVEDTVL 157
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + + FG VA LV+GV+KL+QL N + K ++A+ L MFLAMA D R +
Sbjct: 158 TVSELTKEFGEEVALLVDGVTKLTQL------NYSKDKVEIQAENLRKMFLAMAKDIRVI 211
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM T+ K+ ++ET++I+ P+A RLGIS K++L++L ++L P+
Sbjct: 212 LIKLADRLHNMRTMQYQTPKKQIEKSRETMDIYAPIAQRLGISMIKIELDDLSLQYLEPE 271
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ EL+ K+ + EA + S +E + + + + NIS + GR K +SI+ KM+ +
Sbjct: 272 VYKELNEKIASKKEEREAFINSIVEDVGKHIAEANISAKI-DGRVKHFFSIYKKMVNQGK 330
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+++I+D++ +R++V+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 331 TLEQIYDLFAVRIVVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMY 381
>gi|302038556|ref|YP_003798878.1| GTP pyrophosphokinase [Candidatus Nitrospira defluvii]
gi|300606620|emb|CBK42953.1| GTP pyrophosphokinase [Candidatus Nitrospira defluvii]
Length = 727
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V +A+ + +AH GQMR SG+PY H + A LL + + T + AGLLHDTL+D
Sbjct: 26 DLVRRAYDFSAKAHEGQMRRSGEPYFRHPLAVAGLLTHLKTDVTAIVAGLLHDTLEDTLA 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVL 349
+ + + FG V LV+GV+K+ +++ E +A+ M L+MAD R VL
Sbjct: 86 TPLELEQRFGKDVVHLVDGVTKIGKITFRNYEEK------QAENFRKMVLSMADDIRVVL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ L KRQ+ A+ETLEI+ PLANRLGI K +LE+LC KHL PD
Sbjct: 140 IKLADRLHNMRTLEYLSEGKRQQIAQETLEIYAPLANRLGIGWIKNELEDLCLKHLKPDV 199
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L ++ + + + + I+ +++A+ + + V GR K LY I+ KM K+ ++
Sbjct: 200 YESLRVRVAKRDEDRQQYIIEVIDLVKKAMAEAGLQGEV-SGRPKHLYGIYQKMEKQSIS 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E++D+ LR+I + + +CY L V+H LW +PG+ KDYI PK N Y
Sbjct: 259 FEEVYDLAALRIITDIKMNCYALLGVIHSLWRPLPGRFKDYIAIPKSNMY 308
>gi|416938722|ref|ZP_11934326.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. TJI49]
gi|325524709|gb|EGD02697.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. TJI49]
Length = 788
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 181/305 (59%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLPPEEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+ A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 IMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPTEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMSDAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YS++ KM K+L+ ++ D+YG R++VEN DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSVYRKMRDKQLSFSQVLDVYGFRVVVENPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|401679361|ref|ZP_10811292.1| GTP diphosphokinase [Veillonella sp. ACP1]
gi|400219582|gb|EJO50446.1| GTP diphosphokinase [Veillonella sp. ACP1]
Length = 746
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 194/329 (58%), Gaps = 19/329 (5%)
Query: 192 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 251
AL+++ FN E+ + E Y +L + + D ++KAF A++AH GQ RAS
Sbjct: 10 ALVEQKGFNKEEALKE--FMDYVHSYLGDDEC-------DQIMKAFTLADKAHEGQFRAS 60
Query: 252 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 311
G+PY++H + A +LA + + + A LLHD ++D + + I + FG+ VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGSEVAFLVDGVT 120
Query: 312 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 370
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 174
Query: 371 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 428
+R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVND 234
Query: 429 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 488
+E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPDCY 293
Query: 489 QALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L + H +W +P + KDYI+ PK N Y
Sbjct: 294 AVLGIAHSIWKPLPYRFKDYISMPKSNMY 322
>gi|290961828|ref|YP_003493010.1| guanosine 3',5'-bis-pyrophosphate (ppGpp) synthetase RelA
[Streptomyces scabiei 87.22]
gi|260651354|emb|CBG74476.1| guanosine 3',5'-bis-pyrophosphate (ppGpp) synthetase RelA
[Streptomyces scabiei 87.22]
Length = 847
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/320 (40%), Positives = 187/320 (58%), Gaps = 30/320 (9%)
Query: 204 NIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETA 263
IV GN +A+++ R+ + KA+ AER HRGQ R SGDPY+ H +
Sbjct: 113 RIVRGN----------DAKIETSTLRQ--IEKAYQVAERWHRGQKRKSGDPYITHPLAVT 160
Query: 264 MLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAREN 323
+LA +G + + AGLLHDT++D D + R FG VA LV+GV+KL ++
Sbjct: 161 TILAELGMDPATLMAGLLHDTVEDTEYGLDQLRRDFGDSVALLVDGVTKLDKVK------ 214
Query: 324 NTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFV 382
+ +A+ + M +AMA D R ++IKLADRLHNM T+ L K+++ A+ETLEI+
Sbjct: 215 --FGEAAQAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMRYLKREKQEKKARETLEIYA 272
Query: 383 PLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE---CFDE--AMVTSAIEKLEQAL 437
PLA+RLG++T K +LE+L F L P + E+ + E DE A+VT ++++Q L
Sbjct: 273 PLAHRLGMNTIKWELEDLAFAILYPKMYDEIVRLVAERAPKRDEYLAIVT---DEVQQDL 329
Query: 438 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 497
+ I V GR K YS++ KM+ + EI+D+ G+R++V+ DCY AL VH
Sbjct: 330 RAARIKATV-TGRPKHYYSVYQKMIVRGRDFAEIYDLVGIRVLVDTVRDCYAALGTVHAR 388
Query: 498 WAEVPGKMKDYITRPKFNGY 517
W VPG+ KDYI PKFN Y
Sbjct: 389 WNPVPGRFKDYIAMPKFNMY 408
>gi|406874357|gb|EKD24330.1| hypothetical protein ACD_81C00051G0002 [uncultured bacterium]
Length = 584
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 183/294 (62%), Gaps = 10/294 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ +++AH Q R SG+PY H +TA+ LA+ ++ +AAGLLHDT++D
Sbjct: 25 ELLKKAYLTSQKAHENQKRNSGEPYFNHVFQTALTLASWDLDTATIAAGLLHDTVEDTSY 84
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE--ADRLHTMFLAMA-DARA 347
+ + + FG +A LV GV+KL L K T + +E A+ L M LA++ D R
Sbjct: 85 KLETLQKDFGEEIAFLVNGVTKLGHL-KYRTSVKTEHERMEHLAENLRKMILAISEDLRV 143
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
V +KLADRLHNM TL ++P K++R A ETLEI+ PLA RLG+ +LE+L F +L+P
Sbjct: 144 VFVKLADRLHNMTTLGSVPSLKQKRIALETLEIYAPLAYRLGMQNLSGELEDLTFMYLHP 203
Query: 408 DQHTELSSKLVECFDEAMVTSAIEKLE----QALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+++ + + E ++E + +E++E ALK NI + + R K L S++ K+L+
Sbjct: 204 EEYEWMKKNVSEQYEERV--QYLERVEPLLRTALKKANIEPIKIDYRAKRLSSLYKKLLR 261
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++I+D LR+IV E+CY AL +VHQLW +PG++KDYI PK NGY
Sbjct: 262 SDMNLEQIYDFVALRVIVNTVEECYSALGMVHQLWPPMPGRIKDYIALPKPNGY 315
>gi|167746626|ref|ZP_02418753.1| hypothetical protein ANACAC_01337 [Anaerostipes caccae DSM 14662]
gi|167653586|gb|EDR97715.1| RelA/SpoT family protein [Anaerostipes caccae DSM 14662]
Length = 758
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 184/290 (63%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH+ Q R SG+PY++H + A++LA + + + AGLLHD ++D +
Sbjct: 46 EMVSRAYDMAFEAHKDQKRKSGEPYIIHPICVAIILAELELDRETIIAGLLHDVVEDTDV 105
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +L
Sbjct: 106 TYEDVVREFGVEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVIL 160
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD
Sbjct: 161 IKLADRLHNMRTMQFMKPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLSLRYLKPDV 220
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL L + EA + ++++ ++ I + GR K +SI+ KM+ + T
Sbjct: 221 YKELEHSLDSQKVRREAYIKEIVDEVSGHIERSGIKAEI-DGRVKHFFSIYKKMVNQNKT 279
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D++ +R+ V+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 280 LDQIYDLFAVRIKVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMY 329
>gi|42523075|ref|NP_968455.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
gi|39575280|emb|CAE79448.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
Length = 738
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 184/306 (60%), Gaps = 21/306 (6%)
Query: 217 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 276
+ NA LK + KA+ +E+ H GQ+R SG+PY+ H + A +LA + +
Sbjct: 28 YYPNADLK-------IIEKAYSFSEKMHEGQIRRSGEPYISHPLSVAAILADFHLDLDTI 80
Query: 277 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 336
A GLLHDT++D + + I R FG +A LV+GV+K+ Q+ + N+ K + + +
Sbjct: 81 ATGLLHDTVEDTAATLEDIRREFGDVIAHLVDGVTKIGQM----KFKNSHEK--QGENIR 134
Query: 337 TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 395
M +AM D R VL+KLADRLHNM TL+ +P K++R A ETLEI+ PLA R+GIS K+
Sbjct: 135 KMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALETLEIYCPLAGRMGISALKI 194
Query: 396 QLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLE----QALKDKNISFLVLCGRH 451
+LE+LCF++ PD + EL ++ + EA IE+++ + L + V GR
Sbjct: 195 ELEDLCFRYYRPDMYYELVQQIKKT--EAEQNRYIEEVKHLIGKELTKAGFRYEVY-GRS 251
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K L+SI+ KM + + D+++D+ R++VE+ +CY AL +VH LW +PG+ KD+I
Sbjct: 252 KHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAECYAALGLVHSLWKPIPGRFKDFIAM 311
Query: 512 PKFNGY 517
PK N Y
Sbjct: 312 PKANNY 317
>gi|427392523|ref|ZP_18886528.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
gi|425731484|gb|EKU94302.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
Length = 736
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV +A+ AE AHRGQMR S + Y+ H V+ A +LA I + VA G LHD ++D S
Sbjct: 27 FVKRAYDVAEEAHRGQMRKSQEEYITHPVQVAAILAEIKMDPVTVATGFLHDVIEDTLYS 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
YD I F VADLV+GVSKL + ++E + +A+ M LAMA D R VL+
Sbjct: 87 YDDIAEMFNPKVADLVDGVSKLGKFKFKSKEEH------QAENHRKMLLAMAKDVRVVLV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL K++ A+ETLEI+ PLA+RLGIS K +LE+ +++NP Q+
Sbjct: 141 KLADRLHNMRTLKYHRPEKQREIARETLEIYAPLADRLGISRIKWELEDTALRYINPQQY 200
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + E + +A E +++++ D +I + GR K +YSI+ KM +K
Sbjct: 201 YRIVHLMKSRREDRERYIENAQELIQESVDDLDIEANI-TGRPKHIYSIYRKMKNQKKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV + +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 260 GEIYDLLAIRVIVPSIKDCYAVLGAIHTRWKPMPGRFKDYIAMPKANMY 308
>gi|402771637|ref|YP_006591174.1| ppGpp synthetase I, SpoT/RelA [Methylocystis sp. SC2]
gi|401773657|emb|CCJ06523.1| ppGpp synthetase I, SpoT/RelA [Methylocystis sp. SC2]
Length = 734
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 175/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A +LHDTL+D
Sbjct: 19 EDLLNRAYVYAMKAHGAQTRASGDPYFSHPLEVAAILTDLKLDDATIVAAVLHDTLEDTD 78
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ + I R FG + LVEG++K+ +L + ++ + + + LA+A D R +
Sbjct: 79 ATREEIDRLFGEQIGKLVEGLTKIEKLDLVTKQAR------QGENFRKLLLAVAEDVRVL 132
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL +P KR R A+ETL+I+ PLA R+G+ + +LE L F+HL P+
Sbjct: 133 LVKLADRLHNMRTLHFVPQEKRARIAQETLDIYAPLAGRMGMQRLREELEGLAFRHLMPE 192
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
H + +L + + ++ ++L + + + I+ V GR K+ +S+ KM +K +
Sbjct: 193 AHQTIEQRLHDLRAKNGRIIKRIEDELTKEFEARGITAAV-TGRQKTTFSVWRKMERKSI 251
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ DI+G R+IV EDCY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 252 SFEQLSDIFGFRIIVGAVEDCYRALGVVHTKWPNVPGRFKDYISTPKQNDY 302
>gi|325662331|ref|ZP_08150940.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086134|ref|ZP_08335216.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471333|gb|EGC74556.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406293|gb|EGG85807.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 767
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 182/289 (62%), Gaps = 7/289 (2%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A++AH GQ R SG+PY++H + ++LA + + + AG+LHD ++D ++
Sbjct: 51 MIEKAYRIAKQAHEGQKRKSGEPYIIHPLWVGIILAELEMDKETIVAGILHDAVEDTIMT 110
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I R FGA VA LVEGV+KL QLS + ++A+ L MFLAM+ D R +++
Sbjct: 111 RDDIEREFGAEVALLVEGVTKLGQLS---YSKDVDKMELQAENLRKMFLAMSKDIRVIIV 167
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T P K++ A+ET++I+ P+A RLGIS K +L++L K+ P+
Sbjct: 168 KLADRLHNMRTAQFWPPHKQKEKARETMDIYAPIAQRLGISKIKKELDDLALKYYQPEVF 227
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L ++ + E V ++++ +K+ +I V GR K +SI+ KM+ + T+
Sbjct: 228 YDLVKQINDRKTEREEFVQQIVDEVASHMKNADIQAEVY-GRVKHFFSIYKKMVNQDKTV 286
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+++D++ +R+IV+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 287 DQVYDLFAVRIIVDTVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMY 335
>gi|452850965|ref|YP_007492649.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
gi|451894619|emb|CCH47498.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
Length = 724
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 179/291 (61%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ + +AH G +R SG+PY+ H + A LLA + + VAAGLLHDT++D
Sbjct: 21 DLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVANLLADMQLDEATVAAGLLHDTVEDTDT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAV 348
+ D I FG+ VAD+V+GV+K+S++ + SK V+ A+ + + LAMA D R +
Sbjct: 81 TVDEIEELFGSDVADIVDGVTKISKM-------DFESKAVQQAENIRKLILAMAEDIRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL + K++ A+ET +I+ PLANRLG+ K +LE+LC ++L PD
Sbjct: 134 MVKLADRLHNMRTLQYMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELEDLCLRYLKPD 193
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+L+ + E E + I+ ++ L I V GR K +SIH KM ++ L
Sbjct: 194 VFEQLTDAVSEHRAAGEPYIDKVIDLIQNMLNKNKIKGRVY-GRTKHFHSIHVKMEQQGL 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T DEI+D+ R+IV++ +DCY L ++H W VPG+ KDYI+ PK N Y
Sbjct: 253 TFDEIYDLIAFRIIVDSLKDCYSVLGLIHAAWRPVPGRFKDYISIPKANMY 303
>gi|238063876|ref|ZP_04608585.1| relA/spoT family protein [Micromonospora sp. ATCC 39149]
gi|237885687|gb|EEP74515.1| relA/spoT family protein [Micromonospora sp. ATCC 39149]
Length = 828
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 174/289 (60%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 123 LIQTAFDTANRWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYT 182
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG V LV+GV+KL ++ KL +A+ + M +AMA D R ++I
Sbjct: 183 LDQMRADFGGEVTLLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVI 234
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP KR++ AKETLEI PLA+RLG++T K +LE+L F L P ++
Sbjct: 235 KLADRLHNMRTLSFLPAPKREQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRY 294
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E E+++ +K+ LK I GR K LYSI+ KM+ +
Sbjct: 295 EEILRLIGEHQPQRESLLRQVTQKVGTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDF 353
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN Y
Sbjct: 354 NDIYDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMY 402
>gi|303230780|ref|ZP_07317527.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
gi|302514540|gb|EFL56535.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
Length = 746
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 194/329 (58%), Gaps = 19/329 (5%)
Query: 192 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 251
AL+++ FN E+ + E Y +L + + D ++KAF A++AH GQ RAS
Sbjct: 10 ALVEQKGFNKEEALKE--FMDYVHSYLGDDEC-------DQIMKAFTLADKAHEGQFRAS 60
Query: 252 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 311
G+PY++H + A +LA + + + A LLHD ++D + + I + FG+ VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGSEVAFLVDGVT 120
Query: 312 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 370
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 174
Query: 371 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 428
+R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVND 234
Query: 429 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 488
+E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPDCY 293
Query: 489 QALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L + H +W +P + KDYI+ PK N Y
Sbjct: 294 AVLGIAHSIWKPLPYRFKDYISMPKSNMY 322
>gi|282881989|ref|ZP_06290630.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
gi|281298019|gb|EFA90474.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
Length = 711
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 183/292 (62%), Gaps = 19/292 (6%)
Query: 234 IKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
I++ YE A+ H+GQ R SG+ Y++H + AM+LA + +S + AGLLHDT++D ++Y
Sbjct: 22 IRSAYELAKVNHQGQKRNSGEDYIIHPLHVAMILADMNMDSATIIAGLLHDTIEDTSVTY 81
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I + FG +A+LV+GV+KL +L N + +A+ + M LAMA D R +++K
Sbjct: 82 EDIEKKFGKEIAELVDGVTKLKKL------NYKSKAEKQAENIRKMVLAMAKDIRVIIVK 135
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL+ + K+ A ETLEI+ P+A+RLG+S K +LE+L ++L+PD++
Sbjct: 136 LADRLHNMRTLEYMTEAKKIEKATETLEIYAPIADRLGMSRVKWELEDLSLRYLDPDEY- 194
Query: 412 ELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
KLV+ + E ++ S I+ L+ L+ I + GR K+ YSI+ KM K
Sbjct: 195 ---YKLVDMVNKRRKEREELINSIIDTLKVNLERVGIK-CEINGRPKNFYSIYKKMKVKG 250
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R++ + +DCY AL VVH LW +PG+ KDYI PK N Y
Sbjct: 251 KVFDEIYDLSAVRILTNDIKDCYGALGVVHTLWKPIPGRFKDYIAMPKPNNY 302
>gi|392542311|ref|ZP_10289448.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
piscicida JCM 20779]
Length = 700
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 175/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH GQ R+SG+PY+ H VE +LA++ + + A L+HD ++D
Sbjct: 21 DLVQKAYVVAREAHEGQTRSSGEPYITHPVEVTQILASMRLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S D + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQDDLAEIFGDTVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L S++ + + V S I+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 YRALRSEVAKARGNRKEVISNIQSEIESRLEEAGIQGSV-KGREKHLYSIYRKMLNKELM 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V+N + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRINVDNLDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|409201165|ref|ZP_11229368.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
flavipulchra JG1]
Length = 700
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 175/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH GQ R+SG+PY+ H VE +LA++ + + A L+HD ++D
Sbjct: 21 DLVQKAYVVAREAHEGQTRSSGEPYITHPVEVTQILASMRLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S D + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQDDLAEIFGDTVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L S++ + + V S I+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 YRALRSEVAKARGNRKEVISNIQSEIESRLEEAGIQGSV-KGREKHLYSIYRKMLNKELM 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V+N + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRINVDNLDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|399050755|ref|ZP_10740799.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
gi|433545167|ref|ZP_20501527.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
gi|398051471|gb|EJL43793.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
gi|432183556|gb|ELK41097.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
Length = 723
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 176/292 (60%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ AE+AH GQ+R SG PY++H + A +LA + ++ +AAG LHD ++D +
Sbjct: 22 DLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVTIAAGFLHDVVEDTDV 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA LV+GV+KL ++ ++E A+ M +AMA D R ++
Sbjct: 82 TLDDLREQFGPDVALLVDGVTKLEKIKYKSKEEQL------AENHRKMLVAMAQDIRVIM 135
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++ + ETLEIF PLA+RLGI++ K +LE+ ++LNP Q
Sbjct: 136 IKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIASVKWELEDTALRYLNPQQ 195
Query: 410 HTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + K VE EA + A + + + L + NI + GR K +YSI KM K+
Sbjct: 196 YYRIVNLMQKKRVE--REAYLNEASDTIREKLGELNIEAEI-SGRPKHIYSIFKKMTKQN 252
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ LR+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 253 KQFNEIYDLLALRIIVNDIRDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMY 304
>gi|428219731|ref|YP_007104196.1| (p)ppGpp synthetase I SpoT/RelA [Pseudanabaena sp. PCC 7367]
gi|427991513|gb|AFY71768.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena sp. PCC 7367]
Length = 746
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 177/293 (60%), Gaps = 12/293 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS-TVVAAGLLHDTLDDA 288
E + +A A H GQ RASG+PY+LH +E A +L +G S ++ AG LHD ++D
Sbjct: 40 EAIICRALKFACELHEGQYRASGEPYILHPIEVATILRDLGGGSKAMIVAGFLHDVVEDT 99
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEA-DRLHTMFLAMA-DAR 346
++ I FGA +A LVEGV+KLS+ N SKT A + MFLAMA D R
Sbjct: 100 EVTVADIEAEFGAEIAALVEGVTKLSKF-------NFESKTERAAENFRRMFLAMAQDIR 152
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+++KLADRLHNM TL+ LP K+ A+ET+EIF PLANRLGI K +LE+L FK+++
Sbjct: 153 VIVVKLADRLHNMRTLEHLPAPKQANIARETMEIFAPLANRLGIGQIKWELEDLSFKYID 212
Query: 407 PDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
D + ++ S +VE E + + L ++ ++ + GR K LY I+ KM +
Sbjct: 213 KDAYQQMRSLVVENRRNREERLARVRDILRSRIEQLGLTNFEISGRPKHLYGIYQKMQVR 272
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R+IVEN+E CY+ L VVH + +PG+ KDYI PK N Y
Sbjct: 273 QKKYEEIYDVSAIRIIVENKEACYRVLAVVHDCFRPIPGRFKDYIGLPKPNRY 325
>gi|222151518|ref|YP_002560674.1| GTP pyrophosphokinase [Macrococcus caseolyticus JCSC5402]
gi|222120643|dbj|BAH17978.1| GTP pyrophosphokinase [Macrococcus caseolyticus JCSC5402]
Length = 730
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 184/289 (63%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV+K++ AE+AH GQ R +G PY++H ++ A +LA + + + AG LHD ++D +
Sbjct: 27 FVVKSYELAEKAHEGQFRKNGLPYIMHPIQVAGILAEMKLDGPTIVAGFLHDVVEDTPYT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ + + F VA +V+GV+KL ++ ++ +A+ +F+A+A D R +L+
Sbjct: 87 YEDLKQMFNEEVAYIVDGVTKLEKVKYRSKAEE------QAENHRKLFIAIAKDVRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL A+P K+ R AKETLEI+ PLA+RLGI+T K +LE++ ++++ Q+
Sbjct: 141 KLADRLHNMRTLKAMPHEKQVRIAKETLEIYAPLAHRLGINTIKWELEDISLRYIDSIQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ K E+ + +AI+ +++ ++ I+ + GR K +YSI+ KM+K+K
Sbjct: 201 FRIVHLMKKKRSERESYIENAIDNIQKEMQITGINGEI-TGRPKHIYSIYRKMVKQKKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV++ +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 260 DQIFDLLAIRIIVDSIKDCYAVLGLVHTLWKPMPGRFKDYIAMPKPNMY 308
>gi|410637546|ref|ZP_11348124.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Glaciecola lipolytica E3]
gi|410142908|dbj|GAC15329.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Glaciecola lipolytica E3]
Length = 705
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 176/285 (61%), Gaps = 10/285 (3%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
A+ A+ AH GQMR+SGDPY+ H V A +LA + + + + LLHD ++D S D +
Sbjct: 26 AYVLAKDAHDGQMRSSGDPYITHPVAVAGILADMHLDEETIKSALLHDVIEDTHYSKDDL 85
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
R FG V DLVEGVSKL ++ ++ + +A+ M +AM D R +LIKLAD
Sbjct: 86 VREFGETVGDLVEGVSKLDKI------QFSSKQEAQAENFRKMMMAMVQDIRVILIKLAD 139
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
R HNM TL +L KR+R A+ETLEI+ P+A+RLGI K +LE+L F+ + P +H LS
Sbjct: 140 RTHNMRTLGSLRPDKRRRIARETLEIYAPIAHRLGIHDIKNELEDLGFQAMYPMRHRALS 199
Query: 415 S--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 472
+ K + ++ + E++E LK ++ V+ GR K LYSI+ KM K+L +E+
Sbjct: 200 AAVKQARGNRKEIIENTREEVETRLKANGLNGQVV-GREKHLYSIYRKMKNKELLFNEVM 258
Query: 473 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV++ + CY+AL +H L+ + G+ KDY+ P+ NGY
Sbjct: 259 DIYAFRVIVDSVDSCYRALGAMHGLYKPIEGRFKDYVAIPRTNGY 303
>gi|222055238|ref|YP_002537600.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter daltonii FRC-32]
gi|221564527|gb|ACM20499.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter daltonii FRC-32]
Length = 716
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 ELVRKAYVFCAKVHQGQTRLSGEPYLVHPMEVAGVLAELKLDVPTVVTGLLHDTVEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 TLEELEEMFGPEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L+P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSIAKETLDIYAPIANRLGISWVKSELEDLSFRYLDPQI 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L+SK+ + E V ++ ++ L D I V GR K LYSI+ KM + +
Sbjct: 195 YYDLASKVTKKKKERETYVDEVMQIIKAKLVDHGIKGEV-SGRSKHLYSIYRKMQSRSVD 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DEI+D+ +R++VE+ +CY+ L ++H W +PG+ KDYI PK N Y
Sbjct: 254 IDEIYDLIAIRVMVEDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMY 303
>gi|417002340|ref|ZP_11941729.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479481|gb|EGC82577.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 726
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 179/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ E HRGQ R SG+ Y +H + A L+ + + + AGL+HD L+D ++
Sbjct: 27 LIKKAYDFGELHHRGQKRNSGEDYYIHPIAVAKKLSEMKLDDQTICAGLMHDVLEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG + LV+GV+KL L+ +RE +A+ + M +AM+ D R VLI
Sbjct: 87 RDQMAEVFGEEITFLVDGVTKLKNLNYTSREEK------QAENIRKMVMAMSNDVRVVLI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KL+DRLHNM TL+ + K+ + A ETLEI+VPLA+RLGI + K +LE+LCF++ P+++
Sbjct: 141 KLSDRLHNMRTLEYMTRKKQIQIADETLEIYVPLAHRLGIYSLKWELEDLCFRYQEPEKY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
EL+ + EA + IE L ++L+ +I+F + GR KSLYSI+ KM + +
Sbjct: 201 YELAEMVNVKRREREAYINEIIESLSKSLEGTDINFEI-SGRPKSLYSINKKMQRNGIAF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V+ +CY L VH LW +P ++KDYI +PK NGY
Sbjct: 260 EEIYDLTAVRVLVDTIAECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGY 308
>gi|395204776|ref|ZP_10395716.1| GTP diphosphokinase [Propionibacterium humerusii P08]
gi|422439435|ref|ZP_16516258.1| GTP diphosphokinase [Propionibacterium acnes HL037PA3]
gi|422470924|ref|ZP_16547424.1| GTP diphosphokinase [Propionibacterium acnes HL037PA2]
gi|422574246|ref|ZP_16649800.1| GTP diphosphokinase [Propionibacterium acnes HL044PA1]
gi|313837766|gb|EFS75480.1| GTP diphosphokinase [Propionibacterium acnes HL037PA2]
gi|314927352|gb|EFS91183.1| GTP diphosphokinase [Propionibacterium acnes HL044PA1]
gi|314972703|gb|EFT16800.1| GTP diphosphokinase [Propionibacterium acnes HL037PA3]
gi|328907438|gb|EGG27204.1| GTP diphosphokinase [Propionibacterium humerusii P08]
Length = 773
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 172/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 LIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDEQTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG VA LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEVALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + + L + I V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVISIVRKDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|376294946|ref|YP_005166176.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans ND132]
gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
ND132]
Length = 737
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 179/291 (61%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ + +AH G +R SG+PY+ H + A LLA + + VAAGLLHDT++D
Sbjct: 21 DLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVAYLLADMQLDEATVAAGLLHDTVEDTDT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAV 348
+ D I FG+ VAD+V+GV+K+S++ + SK V+ A+ + + LAMA D R +
Sbjct: 81 TVDEIEELFGSDVADIVDGVTKISRM-------DFESKAVQQAENIRKLILAMAEDIRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ + K++ A+ET +I+ PLANRLG+ K +LE+LC ++L PD
Sbjct: 134 MVKLADRLHNMRTLEYMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELEDLCLRYLRPD 193
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ +LS + E E + I + LK I V GR K L+SI KM ++ L
Sbjct: 194 VYAQLSEAVHEHRAAGEPYIDKVIGLITDMLKKNKIKGRVF-GRTKHLHSIQVKMEQQGL 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T DEI+D+ R+IV + +DCY L ++H W VPG+ KDYI+ PK N Y
Sbjct: 253 TFDEIYDLIAFRVIVGSLKDCYAVLGLIHAAWRPVPGRFKDYISIPKANMY 303
>gi|288574632|ref|ZP_06392989.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570373|gb|EFC91930.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 753
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 174/286 (60%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A A AH Q R +G+PY++HCV A +LA + + + A LLHD ++D ++ +
Sbjct: 59 EALIFAAEAHGEQKRGTGEPYIIHCVYVASILADMKMDVKTMEAALLHDCIEDTVVTKEA 118
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V LV+GV+KL +L + E+ +A+ L MFL MA D R VLIKLA
Sbjct: 119 LAERFGEEVGVLVDGVTKLGKLPFKSFED------YQAENLRKMFLVMAKDIRVVLIKLA 172
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL AL K+QR AKETLEI+ PLA+RLGI K LE+L FK+ +P+ + E+
Sbjct: 173 DRTHNMRTLGALRKDKQQRIAKETLEIYAPLAHRLGIYQVKRTLEDLAFKYYDPNMYYEI 232
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K+ + EA + AI+ LE+ L + I L+ GR K YSI KM +K L++D++
Sbjct: 233 KKKVQKRLPEREATIKKAIDVLEEKLNSQGIDALI-KGRAKHFYSILEKMNRKGLSVDQL 291
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ +R+IV++ CY L +VH +W +PG+ DYI PK N Y
Sbjct: 292 YDLLAMRIIVDDITTCYTVLGIVHTIWKPIPGQFDDYIANPKNNMY 337
>gi|365898364|ref|ZP_09436325.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3843]
gi|365420889|emb|CCE08867.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3843]
Length = 761
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 56 EDLLNRAYVYAMKAHGSQTRASGDPYFTHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 115
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L ++RE +A+ L + LA+AD R +
Sbjct: 116 ATRAEIDHLFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 169
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL+ +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+PD
Sbjct: 170 LVKLADRLHNMRTLEFVPEASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPD 229
Query: 409 QHTELSSKLVECFDEAM-VTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + +L D + + IE +L + +D ++ V GR K +SI KM +K +
Sbjct: 230 AYRVVMQRLDALTDRNLDLIGEIESQLAKKFRDNGLTARV-SGRRKKPFSIWTKMERKSI 288
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+I+ + E CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 289 GFEQLSDIFGFRVIMPDVESCYRALGIVHTTWPVVPGRFKDYISTPKQNDY 339
>gi|330814148|ref|YP_004358387.1| GTP pyrophosphokinase [Candidatus Pelagibacter sp. IMCC9063]
gi|327487243|gb|AEA81648.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Candidatus Pelagibacter sp. IMCC9063]
Length = 571
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 175/285 (61%), Gaps = 9/285 (3%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
AF AE+AH Q R SG+PY+ H VE A +LA + + + LLHDT++D ++D +
Sbjct: 26 AFLFAEQAHISQKRDSGEPYINHPVEVANILAELKLDGPTITTALLHDTIEDTGTTFDEV 85
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
+ FG +A+LVEGV+KLS+L RE A+ + LA + D R +L+KLAD
Sbjct: 86 KKKFGNEIAELVEGVTKLSRLENKNRE------FTLAENFRKLILATSKDIRVLLVKLAD 139
Query: 355 RLHNMMTLDA-LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
RLHNM T+DA L K+ R A+ET+EI+ PLANR+G+ + +LE+L FK LN + T +
Sbjct: 140 RLHNMRTIDAVLSEEKKNRIARETMEIYAPLANRIGMHNVRDELEDLSFKVLNSEARTLI 199
Query: 414 SSKLVECF-DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 472
+L + + + S I L +KN + GR KS +SI K+ K++++++I
Sbjct: 200 LDRLENVYPNTQRLFSEISDEINLLFEKNQIKAKITGREKSCFSIWKKIQSKRISLEQIT 259
Query: 473 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DI G R+I++N EDCY+AL + HQ W VPG+ KDYI+ PK N Y
Sbjct: 260 DIMGFRIILDNVEDCYRALGIFHQNWKMVPGRFKDYISTPKSNNY 304
>gi|414154562|ref|ZP_11410880.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453959|emb|CCO08784.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 723
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ KA+ AE AHRGQ R SG+ Y++H + +++LA + + VAAGLLHD ++D ++
Sbjct: 22 FLRKAYNFAEHAHRGQKRISGEDYIVHPLAISIILAELQLDVQTVAAGLLHDVVEDTGIT 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FGA VA++V+GV+KL +L +E +A+ L MFLAMA D R +LI
Sbjct: 82 LADIENNFGAEVANMVDGVTKLGKLQYQTKEER------QAENLRKMFLAMAKDIRVILI 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHN+ TL K++ A+ETL F P+A+RLGI K +LE+L F++L P+Q+
Sbjct: 136 KLADRLHNLRTLQFQSERKQKEVAEETLHFFAPMAHRLGIYKIKWELEDLSFRYLEPEQY 195
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ +++ + E + I++L + L NI + GR K+LYSI+ KM++++ +
Sbjct: 196 QRMKAQIAKSRAKREEYIQGVIKELAEKLAAVNIKAEI-QGRPKNLYSIYQKMIEQQKEL 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I D+ +R++V + +DCY AL + H LW +PG+ KDYI PK N Y
Sbjct: 255 KDIFDVQAVRVLVNSVKDCYGALGIAHTLWKPIPGRFKDYIAMPKSNMY 303
>gi|171315538|ref|ZP_02904774.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MEX-5]
gi|171099375|gb|EDT44113.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MEX-5]
Length = 788
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 175/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K ++ +E ++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVIGKILEAAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFS 306
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ DCY + +H L+ VPGK KDYI PK NGY
Sbjct: 307 QVLDVYGFRVVVESPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGY 354
>gi|170698516|ref|ZP_02889587.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria IOP40-10]
gi|170136600|gb|EDT04857.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria IOP40-10]
Length = 788
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 182/305 (59%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLPPEEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILESAQRAMTDAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YSI+ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|17229041|ref|NP_485589.1| (p)ppGpp 3-pyrophosphohydrolase [Nostoc sp. PCC 7120]
gi|17135369|dbj|BAB77915.1| (p)ppGpp 3-pyrophosphohydrolase [Nostoc sp. PCC 7120]
Length = 751
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 174/289 (60%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H GQ R SG+ Y+ H + A LL +G + ++AAG LHD ++D ++
Sbjct: 43 LICRAFDFAYQLHHGQYRKSGELYISHPIAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 102
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FG V LVEGV+KLS++ N T+ K +A+ MFLAMA D R +++
Sbjct: 103 IEEIEERFGPEVKQLVEGVTKLSKI------NFTSKKESQAENFRRMFLAMAQDIRVIVV 156
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 157 KLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKNLEPEAF 216
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++ + E D E + A L L+ + L + GR K LYSI+ KM +++
Sbjct: 217 RQMQKYVSEKRDAREEKLAKATAILRDRLQQAGVRCLDISGRPKHLYSIYQKMHRQQKEF 276
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ LR+IVE E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 277 NEIYDLAALRIIVETNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 325
>gi|354558097|ref|ZP_08977353.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
metallireducens DSM 15288]
gi|353548822|gb|EHC18266.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
metallireducens DSM 15288]
Length = 726
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 182/306 (59%), Gaps = 13/306 (4%)
Query: 216 EFLANAQLKHKIFRED-FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
EFL QLKH +E KA+Y AE+AHRGQ+R SG+ Y+ H +E A +L + +
Sbjct: 5 EFLD--QLKHVFPQESGLAEKAYYFAEKAHRGQLRNSGEDYIQHPLEVAKILLELEMDEA 62
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 334
+AA LLHD ++D + + I + FG VA +V+GV+KL ++ + + +
Sbjct: 63 TIAAALLHDVVEDTPYTIEDIEKEFGPQVALMVDGVTKLGRIPYKTKVEQ------QVEN 116
Query: 335 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 393
L MFLAMA D R +LIKLADRLHNM TL K++ A+ET+EIF PLANRLGI
Sbjct: 117 LRKMFLAMAKDIRVILIKLADRLHNMRTLKYHSHEKQKEIAQETIEIFAPLANRLGIFRI 176
Query: 394 KVQLENLCFKHLNPDQHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRH 451
K +LE+L F++L P ++ +LS + E + IE+L L + I + GR
Sbjct: 177 KWELEDLSFRYLKPQEYYDLSEGIAFKRREREDQINEVIEQLRHRLGEVGIHAEI-AGRP 235
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K YSI+ KM+ + + EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI
Sbjct: 236 KHFYSIYRKMVTQNKELSEIYDLTAVRVIVDSVNDCYGALGIIHTMWKPLPGRFKDYIAM 295
Query: 512 PKFNGY 517
PK N Y
Sbjct: 296 PKPNMY 301
>gi|172059928|ref|YP_001807580.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia ambifaria MC40-6]
gi|171992445|gb|ACB63364.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MC40-6]
Length = 788
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 182/305 (59%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLPPEEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILESAQRAMSDAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YSI+ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|402850133|ref|ZP_10898344.1| GTP pyrophosphokinase [Rhodovulum sp. PH10]
gi|402499575|gb|EJW11276.1| GTP pyrophosphokinase [Rhodovulum sp. PH10]
Length = 766
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 174/291 (59%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + + A LLHDT++D
Sbjct: 54 EDLLNQAYVYAMKAHGEQKRASGDPYFSHPLEVAAILTDLKLDDSTIVAALLHDTIEDTD 113
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I R FG + LVEG++KL +L ++RE +A+ L + LA+A D R +
Sbjct: 114 ATRTDIDRIFGPDIGHLVEGLTKLKKLELVSREAK------QAENLRKLLLAIAEDVRVL 167
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL +P KR+R A+ET++I+ PLA R+G+ + +LE+L F+ L+PD
Sbjct: 168 LVKLADRLHNMRTLGYMPAEKRKRIAEETIDIYAPLAARMGMHEMRSELEDLSFRVLHPD 227
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+S++L V + ++ ++L L + I V GR K YS+ KM +K L
Sbjct: 228 AFQVISARLDQVAAKNSDLIAEIEQQLTAKLAGRGIEASV-TGRRKHAYSVWRKMERKAL 286
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DIYG R IV DCY AL VVH W VPG+ KDY++ PK N Y
Sbjct: 287 GFEQLSDIYGFRAIVATVADCYAALGVVHTTWPLVPGRFKDYVSTPKQNDY 337
>gi|345848758|ref|ZP_08801777.1| GTP pyrophosphokinase [Streptomyces zinciresistens K42]
gi|345639843|gb|EGX61331.1| GTP pyrophosphokinase [Streptomyces zinciresistens K42]
Length = 843
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 176/291 (60%), Gaps = 18/291 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D
Sbjct: 125 VEKAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGL 184
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
D + R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IK
Sbjct: 185 DQLRRDFGDSVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIK 236
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 237 LADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYD 296
Query: 412 ELSSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
E+ + E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 297 EIVRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGR 352
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 353 DFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 403
>gi|116513948|ref|YP_812854.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093263|gb|ABJ58416.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 754
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 172/294 (58%), Gaps = 19/294 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQ-RFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
KLADRLHNM TL+ L +Q R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP-- 198
Query: 410 HTELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
E K+V D E + AI+ L L I + + GR K +YSI+ KM+
Sbjct: 199 --EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVN 255
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K +EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 KHKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGY 309
>gi|347541215|ref|YP_004848641.1| (p)ppGpp synthetase I SpoT/RelA [Pseudogulbenkiania sp. NH8B]
gi|345644394|dbj|BAK78227.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania sp. NH8B]
Length = 718
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 173/286 (60%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF + AH GQ R SG+PY+ H + A +L + +AA LLHD L+D ++
Sbjct: 40 QAFELSRAAHEGQTRKSGEPYITHPLAVATMLTEWRLDVQGLAAALLHDVLEDTGVTKPT 99
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG +ADLV+G+SKL +L +E T +A+ M LAMA D R +++KLA
Sbjct: 100 LVEKFGRTIADLVDGLSKLERLEYQTKE------TAQAENFRKMVLAMARDIRVIIVKLA 153
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TLDA+ KRQR A ETLEI+ P+ANR+G++ +L++L FKHL+P ++ L
Sbjct: 154 DRLHNMRTLDAMREDKRQRIALETLEIYAPIANRIGLNKVYRELQDLAFKHLHPHRYHVL 213
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + +V+ + + Q L + NI + GR K+L+SI+ KM +K L+ E+
Sbjct: 214 SKAVRAARGNRREVVSKILHSVSQKLVECNIE-ATIKGREKNLFSIYKKMQEKHLSFSEV 272
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIYG R+IV + CY AL +H L+ +PGK KDYI PK NGY
Sbjct: 273 LDIYGFRVIVNDVPSCYLALGALHSLYKPIPGKFKDYIAIPKGNGY 318
>gi|115350915|ref|YP_772754.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia ambifaria AMMD]
gi|115280903|gb|ABI86420.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria AMMD]
Length = 788
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +++ +E ++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVISKILESAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFS 306
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGY
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGY 354
>gi|420187166|ref|ZP_14693188.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
gi|394256604|gb|EJE01533.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
Length = 729
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA +T+AI K++ + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|392943901|ref|ZP_10309543.1| (p)ppGpp synthetase, RelA/SpoT family [Frankia sp. QA3]
gi|392287195|gb|EIV93219.1| (p)ppGpp synthetase, RelA/SpoT family [Frankia sp. QA3]
Length = 836
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 188/311 (60%), Gaps = 16/311 (5%)
Query: 210 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 269
L+ + LAN H D V +AF A+ AH GQ+R SG PY+ H + A +LA +
Sbjct: 99 LDPVLRGLLAN----HPRADLDQVQRAFEVADAAHAGQVRFSGHPYITHPIAVASILADL 154
Query: 270 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 329
G ++ ++A LLHDTL++ LS + I TFG +A +V+ VSKL+++ +
Sbjct: 155 GMDTPTLSAALLHDTLEETSLSAEAIRETFGDQIALIVDAVSKLNRVK--------VGEA 206
Query: 330 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 388
+A+ + M +AMA D RA+++KLADRLHNM TL LP K++R A+ETLE++ PLA+RL
Sbjct: 207 AQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLPEHKQERKARETLEVYAPLAHRL 266
Query: 389 GISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLV 446
G+++ K +LE+L F L P ++ E+ + + + + I +++ + D I V
Sbjct: 267 GMNSLKWELEDLAFAALYPKRYDEIVRLVADRAPSRDVYLAEVIGQVQAGVGDARIR-AV 325
Query: 447 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 506
+ GR K YSI+ KM+ + + D+I+D+ G+R++V++ DCY L VH W +PG+ K
Sbjct: 326 VSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVDSVRDCYATLGTVHANWKPIPGRFK 385
Query: 507 DYITRPKFNGY 517
DYI PKFN Y
Sbjct: 386 DYIAMPKFNMY 396
>gi|238018954|ref|ZP_04599380.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
gi|237864438|gb|EEP65728.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
Length = 746
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 195/329 (59%), Gaps = 19/329 (5%)
Query: 192 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 251
AL+++ TFN E + E Y +L + + V+KAF A++AH GQ+RAS
Sbjct: 10 ALVEQGTFNKEKALAE--FMEYIHTYLTDDECNQ-------VLKAFELADKAHEGQLRAS 60
Query: 252 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 311
G+PY++H + A +LA + + + A L+HD ++D S + + + FG+ VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLMAALMHDVVEDTSYSKEDLEKMFGSEVAFLVDGVT 120
Query: 312 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 370
KL+Q +E+ + + M LAMA D R V+IKLADRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLADRLHNMRTLKHMRSDKQ 174
Query: 371 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 428
+R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQAREDIVND 234
Query: 429 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 488
+ +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMSQLTKALGEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTIPDCY 293
Query: 489 QALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L + H LW +P + KDYI+ PK N Y
Sbjct: 294 AVLGIAHSLWKPLPYRFKDYISMPKSNMY 322
>gi|111221581|ref|YP_712375.1| GTP pyrophosphokinase [Frankia alni ACN14a]
gi|111149113|emb|CAJ60796.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Frankia alni
ACN14a]
Length = 737
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 182/290 (62%), Gaps = 12/290 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V +AF A+ AH GQ+R SG PY+ H + A +LA +G ++ ++A LLHDTL++ L
Sbjct: 15 DQVQQAFEVADAAHAGQVRFSGHPYITHPIAVASILADLGMDTPTLSAALLHDTLEETSL 74
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + I TFG +A +V+ VSKL+++ + +A+ + M +AMA D RA++
Sbjct: 75 SAEAIRETFGDQIALIVDAVSKLNRVK--------VGEAAQAETIRRMVVAMARDPRALV 126
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL LP K++R A+ETLE++ PLA+RLG+++ K +LE+L F L P +
Sbjct: 127 VKLADRLHNMRTLRFLPEHKQERKARETLEVYAPLAHRLGMNSLKWELEDLAFAALYPKR 186
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ + + + + I +++ L+D I V+ GR K YSI+ KM+ + +
Sbjct: 187 YDEIVRLVADRAPSRDVYLAEVIGQVQAGLRDARIR-AVVSGRPKHYYSIYQKMVVRGRS 245
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D+ G+R++V++ DCY L VH W +PG+ KDYI PKFN Y
Sbjct: 246 FDDIYDLVGIRVLVDSVRDCYATLGTVHANWKPIPGRFKDYIAMPKFNMY 295
>gi|72383394|ref|YP_292749.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL2A]
gi|72003244|gb|AAZ59046.1| metal dependent phosphohydrolase [Prochlorococcus marinus str.
NATL2A]
Length = 775
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E ++ AF A + H+GQ R SG+PY+ H V A LL IGA+++V+AAG LHD ++D
Sbjct: 66 EALLVAAFDLAYQLHKGQFRKSGEPYITHPVAVADLLREIGASASVIAAGFLHDVVEDTD 125
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ + + FG+ V LVEGV+KL + NN +A+ L MFLAM+ D R V
Sbjct: 126 ITPEQLEGYFGSEVRYLVEGVTKLGGIHF----NNRTE--AQAENLRKMFLAMSSDIRVV 179
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T+ L K+ R A+ET EI+ PLANRLGI K +LE+L FK L PD
Sbjct: 180 LVKLADRLHNMRTISYLGEEKQTRIARETREIYAPLANRLGIGRLKWELEDLAFKLLEPD 239
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
E+ ++ E + + ++ L+ L + + GR K LY I KM ++K
Sbjct: 240 PFREIQQQIASKRSEREERLNTTVQLLKDRLNSAGLHQCEVSGRPKHLYGIWSKMQRQKK 299
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ LR+IV + E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 300 EFHEIFDVAALRIIVSDVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|420177943|ref|ZP_14684277.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
gi|420179188|ref|ZP_14685487.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
gi|394247130|gb|EJD92378.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
gi|394254263|gb|EJD99234.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
Length = 729
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA +T+AI K++ + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|418606224|ref|ZP_13169516.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
gi|418621259|ref|ZP_13184038.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
gi|374409014|gb|EHQ79818.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
gi|374829871|gb|EHR93665.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
Length = 590
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA +T+AI K++ + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|224823882|ref|ZP_03696991.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania ferrooxidans
2002]
gi|224604337|gb|EEG10511.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania ferrooxidans
2002]
Length = 722
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 173/286 (60%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF + AH GQ R SG+PY+ H + A +L + +AA LLHD L+D ++
Sbjct: 44 QAFELSRAAHEGQTRKSGEPYITHPLAVATMLTEWRLDVQGLAAALLHDVLEDTGVTKPT 103
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG +ADLV+G+SKL +L +E T +A+ M LAMA D R +++KLA
Sbjct: 104 LVEKFGRTIADLVDGLSKLERLEYQTKE------TAQAENFRKMVLAMARDIRVIIVKLA 157
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TLDA+ KRQR A ETLEI+ P+ANR+G++ +L++L FKHL+P ++ L
Sbjct: 158 DRLHNMRTLDAMREDKRQRIALETLEIYAPIANRIGLNKVYRELQDLAFKHLHPHRYHVL 217
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + +V+ + + Q L + NI + GR K+L+SI+ KM +K L+ E+
Sbjct: 218 SKAVRAARGNRREVVSKILHSVSQKLVECNIE-ATIKGREKNLFSIYKKMQEKHLSFSEV 276
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIYG R+IV + CY AL +H L+ +PGK KDYI PK NGY
Sbjct: 277 LDIYGFRVIVNDVPSCYLALGALHSLYKPIPGKFKDYIAIPKGNGY 322
>gi|27468233|ref|NP_764870.1| GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
gi|57867129|ref|YP_188772.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
gi|242242906|ref|ZP_04797351.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
gi|251811038|ref|ZP_04825511.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875942|ref|ZP_06284809.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
gi|293366410|ref|ZP_06613088.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417655951|ref|ZP_12305642.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
gi|417659668|ref|ZP_12309268.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
gi|417908499|ref|ZP_12552256.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
gi|417911252|ref|ZP_12554959.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
gi|417912614|ref|ZP_12556303.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
gi|418327807|ref|ZP_12938944.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|418603642|ref|ZP_13167024.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
gi|418609265|ref|ZP_13172424.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
gi|418611758|ref|ZP_13174827.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
gi|418615702|ref|ZP_13178641.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
gi|418616388|ref|ZP_13179313.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
gi|418623420|ref|ZP_13186131.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
gi|418626110|ref|ZP_13188736.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
gi|418628145|ref|ZP_13190702.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
gi|418630931|ref|ZP_13193403.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
gi|418633468|ref|ZP_13195881.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
gi|418664077|ref|ZP_13225573.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
gi|419771360|ref|ZP_14297414.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|420163791|ref|ZP_14670525.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
gi|420165616|ref|ZP_14672307.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
gi|420168637|ref|ZP_14675245.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
gi|420170335|ref|ZP_14676896.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
gi|420173158|ref|ZP_14679653.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
gi|420174606|ref|ZP_14681055.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
gi|420184598|ref|ZP_14690707.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
gi|420190242|ref|ZP_14696186.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
gi|420192570|ref|ZP_14698428.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
gi|420196874|ref|ZP_14702608.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
gi|420202331|ref|ZP_14707924.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
gi|420204546|ref|ZP_14710104.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
gi|420206053|ref|ZP_14711563.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
gi|420209134|ref|ZP_14714572.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
gi|420212181|ref|ZP_14717534.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
gi|420214089|ref|ZP_14719369.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
gi|420216238|ref|ZP_14721454.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
gi|420220573|ref|ZP_14725532.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
gi|420221584|ref|ZP_14726512.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
gi|420225825|ref|ZP_14730652.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
gi|420227420|ref|ZP_14732188.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
gi|420229734|ref|ZP_14734438.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
gi|420232145|ref|ZP_14736786.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
gi|421606876|ref|ZP_16048128.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
gi|59798397|sp|Q8CS97.1|RELA_STAES RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|81674357|sp|Q5HNR8.1|RELA_STAEQ RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|27315779|gb|AAO04914.1|AE016748_148 GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
gi|57637787|gb|AAW54575.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
gi|242233621|gb|EES35933.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
gi|251805456|gb|EES58113.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|281294967|gb|EFA87494.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
gi|291319444|gb|EFE59812.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329735305|gb|EGG71597.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
gi|329737201|gb|EGG73455.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
gi|341653575|gb|EGS77342.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
gi|341655860|gb|EGS79583.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
gi|341657324|gb|EGS81014.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
gi|365232585|gb|EHM73576.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|374407151|gb|EHQ78016.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
gi|374408270|gb|EHQ79102.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
gi|374410877|gb|EHQ81607.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
gi|374816752|gb|EHR80951.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
gi|374821214|gb|EHR85281.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
gi|374821769|gb|EHR85816.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
gi|374830622|gb|EHR94388.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
gi|374833733|gb|EHR97404.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
gi|374836241|gb|EHR99829.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
gi|374838528|gb|EHS02068.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
gi|374839221|gb|EHS02739.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
gi|383361586|gb|EID38956.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|394232917|gb|EJD78528.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
gi|394233346|gb|EJD78954.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
gi|394235417|gb|EJD80989.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
gi|394240336|gb|EJD85760.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
gi|394240673|gb|EJD86096.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
gi|394244837|gb|EJD90169.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
gi|394257249|gb|EJE02171.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
gi|394259133|gb|EJE04003.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
gi|394260743|gb|EJE05547.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
gi|394266848|gb|EJE11466.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
gi|394269739|gb|EJE14269.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
gi|394273556|gb|EJE17987.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
gi|394277892|gb|EJE22209.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
gi|394279362|gb|EJE23670.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
gi|394280021|gb|EJE24312.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
gi|394284011|gb|EJE28172.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
gi|394285926|gb|EJE29992.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
gi|394290379|gb|EJE34240.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
gi|394292328|gb|EJE36087.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
gi|394293259|gb|EJE36982.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
gi|394297044|gb|EJE40656.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
gi|394298913|gb|EJE42471.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
gi|394301468|gb|EJE44924.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
gi|406657456|gb|EKC83843.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
Length = 729
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA +T+AI K++ + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|374853909|dbj|BAL56805.1| GTP pyrophosphokinase [uncultured prokaryote]
Length = 732
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 194/315 (61%), Gaps = 14/315 (4%)
Query: 210 LETYAK--EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 267
+ET + + L Q + ED + +A+ + AH+GQ+RASG+PYL+H +E A +LA
Sbjct: 2 METLPRFDDILEQVQAYNPTCDEDLLRRAYVFSAMAHQGQVRASGEPYLVHPLEVARILA 61
Query: 268 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 327
+ + +A GLLHD L+D +++ + + FG + +LV+ ++K++ L K + A
Sbjct: 62 DMRLDEVAIAVGLLHDLLEDTYVTEETLRDQFGDRITNLVKALTKITTLEK----SYAAR 117
Query: 328 KTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 386
+ +A+ M LA + D R +L+KLADRLHNM TL+ L KRQR A+ETLEI+ PLA+
Sbjct: 118 QAAQAESFRRMLLASIEDIRVLLVKLADRLHNMRTLNFLDEPKRQRIAQETLEIYAPLAH 177
Query: 387 RLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIE----KLEQALKDKNI 442
RLGI K +LE+L F +L P++ LS +L ++A ++AIE +LE LKD +I
Sbjct: 178 RLGIGRIKAELEDLAFWNLFPEEAESLSRQLAAKREKA--SAAIELVRAELEHMLKDCSI 235
Query: 443 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 502
V R K LYSI K+ + +++D+++D R++V++ +CY +VHQ W +P
Sbjct: 236 EGEVRF-RIKHLYSIWRKLAVQGISLDQLYDFLAFRVVVDSVANCYAVFGLVHQRWKPIP 294
Query: 503 GKMKDYITRPKFNGY 517
G++KDYI PK NGY
Sbjct: 295 GRLKDYIAVPKSNGY 309
>gi|422549838|ref|ZP_16625638.1| GTP diphosphokinase [Propionibacterium acnes HL050PA1]
gi|314918146|gb|EFS81977.1| GTP diphosphokinase [Propionibacterium acnes HL050PA1]
Length = 774
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 172/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRPDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMY 350
>gi|156741205|ref|YP_001431334.1| (p)ppGpp synthetase I SpoT/RelA [Roseiflexus castenholzii DSM
13941]
gi|156232533|gb|ABU57316.1| (p)ppGpp synthetase I, SpoT/RelA [Roseiflexus castenholzii DSM
13941]
Length = 771
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 177/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E+ V A+ A AH Q R SG+PY+ H V A +L + ++ VAA LLHD L+D
Sbjct: 71 EELVRNAYAIACEAHSKQQRDSGEPYIDHPVAVAHILIDLQLDAASVAAALLHDVLEDTL 130
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
++ + + FGA +A+LV+GV+KLS L RE + MF+AMAD R V
Sbjct: 131 VTKEQLIALFGAEIANLVDGVTKLSALEARTREE------AQVGTYRKMFIAMADDPRVV 184
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T+ +L +++R A+ETLEI+ PLA+RLGI K +LE+ F LNP
Sbjct: 185 LVKLADRLHNMRTISSLSEERQKRMARETLEIYAPLAHRLGIWQIKWELEDRAFAVLNPA 244
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ E+S +L D E ++ I++L Q L+ + I + GR K +YSI+ KM +K +
Sbjct: 245 KYQEISRQLALRRDARERLIHRVIQRLRQVLEKEGIKADI-TGRPKHIYSIYRKMERKGV 303
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++D+I+D +R+IV+ DCY+ L +VH W VPG+ DYI PK + Y
Sbjct: 304 SLDQIYDQLAVRVIVDTVADCYRVLGLVHATWPPVPGEFDDYIAMPKESMY 354
>gi|418702279|ref|ZP_13263190.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410758798|gb|EKR25024.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 674
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 176/292 (60%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D RA+LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRAILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|451981332|ref|ZP_21929693.1| GTP pyrophosphokinase [Nitrospina gracilis 3/211]
gi|451761445|emb|CCQ90949.1| GTP pyrophosphokinase [Nitrospina gracilis 3/211]
Length = 737
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 183/305 (60%), Gaps = 10/305 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E Q H D ++ A+ + +AHRGQ R SG+ YL H VE A L + +
Sbjct: 6 EITEAVQAYHSTANVDIILDAYIYSAKAHRGQSRRSGEAYLSHPVEVAYNLTRLKMDERT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
VAAGLLHDT++D + D I FG + LV+GV+K+ ++ + E +A+
Sbjct: 66 VAAGLLHDTIEDTLATADEIRELFGDEIYGLVDGVTKIGEIEFSSHEEK------QAENY 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R V+IKLADR HN+ TL +L +++R A+ETL+I+ LANRLGI K
Sbjct: 120 RKMILAMARDIRVVMIKLADRAHNLRTLGSLDPSRQKRIARETLDIYAALANRLGIGWLK 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+LE+ FK+L+P+Q+ + +++ + +E +V + LE+ LK ++ V+ GR K
Sbjct: 180 AELEDGSFKYLHPEQYQAIVNRMHKGQEERDQLVKNVYTLLEKELKSADLDG-VITGRSK 238
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
YSI+ KM+ +++ +++++D+ G+R+I + +DCY L +VH LW +PGK KDYI P
Sbjct: 239 HYYSIYRKMVTQQIDLEDVYDLIGVRVITHSVKDCYAVLGLVHSLWRPIPGKFKDYIAMP 298
Query: 513 KFNGY 517
K N Y
Sbjct: 299 KPNMY 303
>gi|229918416|ref|YP_002887062.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sp. AT1b]
gi|229469845|gb|ACQ71617.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sp. AT1b]
Length = 729
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 180/288 (62%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A+ H GQ R SG+PY+LH V+ A +L IG ++T + LLHD ++D +S
Sbjct: 28 VKRAYEYAKLHHTGQFRRSGEPYILHPVQVAGILVDIGLDATTIIGALLHDVVEDTDISL 87
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA LV+GV+KL ++ +++ A + M +AMA D R +LIK
Sbjct: 88 QQLTDDFGPDVAMLVDGVTKLGKIKYKSKKEELA------ENHRKMIIAMAEDVRVILIK 141
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL +P K+ + A+ETLEIF PLA+R+GIST K +LE++ +++NP Q+
Sbjct: 142 LADRLHNMRTLQHMPKEKQVQKAEETLEIFAPLAHRMGISTIKWELEDISLRYINPQQYY 201
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
++ S K EA+VTS I ++ L++ +I V GR K +YSI+ KM+K K +
Sbjct: 202 KIVSMMKQKRTEREALVTSVITEVNGVLEEVHIDADV-NGRPKHIYSIYNKMVKHKKEFN 260
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ DCY L ++H + +PG+ KDYI PK N Y
Sbjct: 261 EIYDLMAVRIIVDSIRDCYAVLGIIHTQYKPMPGRFKDYIAMPKPNMY 308
>gi|86606590|ref|YP_475353.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
gi|86555132|gb|ABD00090.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
Length = 760
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 180/292 (61%), Gaps = 13/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A H+GQ R SGDPY+ H V A LL +G ++ VAAGLLHD ++D +
Sbjct: 50 DLLRRAFEFAYCLHKGQKRKSGDPYIAHPVAVASLLRELGGDAVTVAAGLLHDVVEDTEV 109
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + + FG V LVEGV+KLSQ N +SKT +A+ MF+AMA D R +
Sbjct: 110 TLEALEAEFGPEVRLLVEGVTKLSQF-------NFSSKTEQQAENFRRMFVAMAKDIRVI 162
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL LP K+++ A ET+EIF PLANRLGI +K +LE+L FK+L+ +
Sbjct: 163 VVKLADRLHNMRTLQYLPPHKQKQIAAETMEIFAPLANRLGIWHFKWELEDLAFKYLDYE 222
Query: 409 QHTELSSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ ++ +LV EA + + IE+L + L + + GR K LY I+ KM +++
Sbjct: 223 AYRQI-QELVNAKRSEREAEIQAFIEELRKHLIQGGLEHFEISGRPKHLYGIYRKMQQQR 281
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV+ +CY+ L VVH + +PG+ KDYI PK N Y
Sbjct: 282 KEFHEIYDLLAVRVIVQTVSECYRVLAVVHNCFRPIPGRFKDYIGLPKANRY 333
>gi|421867271|ref|ZP_16298930.1| GTP pyrophosphokinase ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia H111]
gi|358072685|emb|CCE49808.1| GTP pyrophosphokinase ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia H111]
Length = 788
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 183/305 (60%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLGPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKNELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YS++ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|317471454|ref|ZP_07930806.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
gi|316901069|gb|EFV23031.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
Length = 904
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 184/290 (63%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH+ Q R SG+PY++H + A++LA + + + AGLLHD ++D +
Sbjct: 192 EMVSRAYDMAFEAHKDQKRKSGEPYIIHPICVAIILAELELDRETIIAGLLHDVVEDTDV 251
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +L
Sbjct: 252 TYEDVVREFGVEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVIL 306
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD
Sbjct: 307 IKLADRLHNMRTMQFMKPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLSLRYLKPDV 366
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL L + EA + ++++ ++ I + GR K +SI+ KM+ + T
Sbjct: 367 YKELEHSLDSQKVRREAYIKEIVDEVSGHIERSGIKAEI-DGRVKHFFSIYKKMVNQNKT 425
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D++ +R+ V+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 426 LDQIYDLFAVRIKVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMY 475
>gi|420183290|ref|ZP_14689423.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
gi|420234790|ref|ZP_14739350.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
gi|394249753|gb|EJD94966.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
gi|394304033|gb|EJE47443.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
Length = 729
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA +T+AI K++ + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|408533281|emb|CCK31455.1| GTP pyrophosphokinase [Streptomyces davawensis JCM 4913]
Length = 847
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 175/289 (60%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 130 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQ 189
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 190 LRRDFGDSVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 241
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 242 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 301
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 302 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 357
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 358 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 406
>gi|374579512|ref|ZP_09652606.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
DSM 17734]
gi|374415594|gb|EHQ88029.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
DSM 17734]
Length = 748
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 181/305 (59%), Gaps = 10/305 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + + K R V KA+ AERAHR Q+R SG+ Y+LH ++ A +L + +
Sbjct: 5 ELMVKMKKKSPQARLAIVDKAYQFAERAHRNQLRNSGEDYILHPLQVAQILVELEMDEAT 64
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
VAA LLHD ++D + I + FG +A LV+GV+KL +L+ ++ + + L
Sbjct: 65 VAASLLHDVVEDTAFTIHDIEKEFGPEIALLVDGVTKLGRLAYKSKVEQ------QVENL 118
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
MFLAMA D R +LIKLADRLHNM TL + K++ A+ETLEIF PLANRLGI K
Sbjct: 119 RKMFLAMAKDIRVILIKLADRLHNMRTLRYHSVEKQKEIAQETLEIFAPLANRLGIFRIK 178
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+LE+L F++L P ++ +L L EA + I ++ + L + I + + GR K
Sbjct: 179 WELEDLSFRYLRPQEYYDLVEGIALKRREREAYINEVIVQMRERLNEVEI-YADIAGRPK 237
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
YSI+ KM + ++EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI P
Sbjct: 238 HFYSIYRKMKTQNKELNEIYDLMAIRVIVDSVNDCYGALGIIHTMWKPIPGRFKDYIAMP 297
Query: 513 KFNGY 517
K N Y
Sbjct: 298 KPNMY 302
>gi|315127921|ref|YP_004069924.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
sp. SM9913]
gi|315016435|gb|ADT69773.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
sp. SM9913]
Length = 701
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AH GQ R+SG+PY+ H VE +LA++ + + A L+HD ++D
Sbjct: 21 ELVQKAYVVAREAHEGQTRSSGEPYITHPVEVTQILASMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQTEIEARLEESGIKATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|392557332|ref|ZP_10304469.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
undina NCIMB 2128]
Length = 701
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AH GQ R+SG+PY+ H VE +LA++ + + A L+HD ++D
Sbjct: 21 ELVQKAYVVAREAHEGQTRSSGEPYITHPVEVTQILASMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQTEIEARLEESGIKATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|359444205|ref|ZP_09234008.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20439]
gi|358041956|dbj|GAA70257.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20439]
Length = 701
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AH GQ R+SG+PY+ H VE +LA++ + + A L+HD ++D
Sbjct: 21 ELVQKAYVVAREAHEGQTRSSGEPYITHPVEVTQILASMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQTEIEARLEESGIKATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|160903362|ref|YP_001568943.1| (p)ppGpp synthetase I SpoT/RelA [Petrotoga mobilis SJ95]
gi|160361006|gb|ABX32620.1| (p)ppGpp synthetase I, SpoT/RelA [Petrotoga mobilis SJ95]
Length = 712
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 188/314 (59%), Gaps = 11/314 (3%)
Query: 211 ETYAKEF--LANAQLKHKIFREDFVIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLA 267
++Y KE L N +L K E IK YE AE +H GQ R SG+ + H ++LA
Sbjct: 6 KSYEKEVEKLLNVKLTKK---EKERIKIAYELAETSHSGQFRDSGEEFFEHPKSVGLILA 62
Query: 268 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 327
+ + + AGLLHD ++D +S D I FG VA++V GV+K+S L R N
Sbjct: 63 GLKMDVDTIIAGLLHDVVEDCGVSIDKIKDLFGIDVANIVSGVTKISNLKLNERLNENDM 122
Query: 328 KTVE-ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 385
K++E + + M AM+ D R +++KLADRLHNM TL+ + K+ A ETL+I+ P+A
Sbjct: 123 KSLEKVETIRKMLFAMSEDIRVIIVKLADRLHNMRTLEFVDRKKQIAKADETLKIYAPIA 182
Query: 386 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNIS 443
+RLGI K +LE+L F++L P+ + +L +K+ E + + + ++Q L ++ I
Sbjct: 183 HRLGIYKMKEELEDLSFRYLYPETYFDLKTKIEEKIRLGQNRLNEYAQIIKQELDNQKIK 242
Query: 444 FLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 503
V GR K LYSI KM++K T+DEI+D LR+I E++ CY L ++H +W+ VPG
Sbjct: 243 ATV-EGRSKHLYSIWDKMIRKGKTLDEIYDYIALRIITEDQNKCYAVLGIIHSIWSPVPG 301
Query: 504 KMKDYITRPKFNGY 517
++KDYI PKFNGY
Sbjct: 302 RIKDYIATPKFNGY 315
>gi|386828714|ref|ZP_10115821.1| (p)ppGpp synthetase, RelA/SpoT family [Beggiatoa alba B18LD]
gi|386429598|gb|EIJ43426.1| (p)ppGpp synthetase, RelA/SpoT family [Beggiatoa alba B18LD]
Length = 734
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 177/286 (61%), Gaps = 5/286 (1%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A ++ Q R SG+PYL+H + A +LA +G ++ V+ A +LH+ LD F S +
Sbjct: 40 QAYQFACEIYQEQTRPSGEPYLIHVLTVADILADLGMDTDVLVAAILHEALDQHF-SLET 98
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I FG V +L++GV+K+ + L + ++ EA+ L M LAM D R VLIKLA
Sbjct: 99 IQNRFGKVVTNLLDGVNKMRFIDNLIEYQKFSEESQEAEGLRKMLLAMVEDVRVVLIKLA 158
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP+ ++RFA++TL+IFVPLANRLGI K +LE+L ++L+ D++ E+
Sbjct: 159 DRLHNMRTLKHLPIDVQKRFAQDTLDIFVPLANRLGIWQIKWELEDLALRYLHADEYQEI 218
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ KL E E + I+ L++ L+ I V+ GR K +YSI KM KK L D I
Sbjct: 219 ARKLDEKRVDRERYIAQVIQILQEELRQAGIKGDVM-GRPKHIYSIWRKMQKKNLDFDRI 277
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DI +R++V N DCY AL ++H W +P + DYI+ PK N Y
Sbjct: 278 YDIRAVRVLVHNVHDCYLALGLIHSKWKHLPSEFDDYISNPKPNNY 323
>gi|386775351|ref|ZP_10097729.1| (p)ppGpp synthetase, RelA/SpoT family protein [Brachybacterium
paraconglomeratum LC44]
Length = 805
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 177/291 (60%), Gaps = 12/291 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
++ V +A+ AERAHRGQ R SGDPY+ H V A +LA +G+ + VVAA LLHDT++D
Sbjct: 78 QELVRQAYTVAERAHRGQTRRSGDPYITHPVSVATILAELGSPADVVAAALLHDTVEDTD 137
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
S D + FG +A +V+GV+KL ++ T + +A+ + M +AM+ D R +
Sbjct: 138 YSLDQLRAEFGEVIAVMVDGVTKLDKV--------TYGEAAQAETVRKMIVAMSRDVRVL 189
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHN T +P +R AKETLEI+ PLA+RLG++T K +LE+ F+ L P
Sbjct: 190 LIKLADRLHNARTWKYVPAASAERKAKETLEIYAPLAHRLGLNTMKWELEDRSFQVLYPK 249
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ E+ S + + E +++ ++++ LK I V GR K YSI+ KM+ +
Sbjct: 250 VYEEIVSLVAQHAPAREQYLSTVSSQIQEDLKKARIKAEV-TGRPKHYYSIYQKMIVRGR 308
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ G+R++V+ DCY L +H W+ V G+ KDYI PKFN Y
Sbjct: 309 DFSDIYDLVGVRVLVDTVRDCYGVLGTLHARWSPVQGRFKDYIALPKFNLY 359
>gi|339441909|ref|YP_004707914.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
gi|338901310|dbj|BAK46812.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
Length = 779
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 196/316 (62%), Gaps = 19/316 (6%)
Query: 215 KEFLANAQLKHKIFRE----------DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAM 264
K+F++ +L ++ R V KA++ A AH+GQ+R SG+ Y++H + A+
Sbjct: 27 KDFVSPEELHEELIRSIRRYHPSTDISLVEKAYHIAANAHKGQVRKSGEEYIIHPLCVAI 86
Query: 265 LLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN 324
+LA + + + AGLLHD +D ++ + + F VA LV+GV+KL+QLS +
Sbjct: 87 ILADLEMDKETIVAGLLHDVAEDTGMTLEELAEDFNDEVALLVDGVTKLNQLS-----YD 141
Query: 325 TASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 383
V+A+ L MFLAMA D R ++IKLADRLHNM TL + K++ A+ET+EI+ P
Sbjct: 142 ADKIEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMKPEKQKEKARETMEIYAP 201
Query: 384 LANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKN 441
+A RLGIS+ KV+LE+L K+L P+ + +L K L + +A V + +++++ + +
Sbjct: 202 IAQRLGISSIKVELEDLSLKYLEPEAYYDLVEKIALRKKERDAYVDALVKQVKSTIAAAD 261
Query: 442 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 501
I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+ + V
Sbjct: 262 IEATVY-GRAKHFFSIYKKMVNQDKTLDQIYDLFAIRIIVKDVKDCYAALGVIHEHYTPV 320
Query: 502 PGKMKDYITRPKFNGY 517
PG+ KDYI PK N Y
Sbjct: 321 PGRFKDYIAMPKPNMY 336
>gi|310829081|ref|YP_003961438.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
gi|308740815|gb|ADO38475.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
Length = 725
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 185/316 (58%), Gaps = 23/316 (7%)
Query: 218 LANAQLKHKI-------------FREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAM 264
+AN ++HKI + ++KA++ A+ AH+ Q R SG+ Y++H V A
Sbjct: 1 MANEAIEHKIDSLIELVKKNNPDADTELILKAYHLADGAHKDQKRLSGEAYIIHPVSVAY 60
Query: 265 LLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN 324
+LA ++ + A +LHD ++D +YD I F VADLVEGV+K+ ++ ++E +
Sbjct: 61 ILAEYKMDTETIVAAILHDVIEDTSYTYDDIKEMFNEQVADLVEGVTKIGKIEYQSKEES 120
Query: 325 TASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 383
+A+ L M LAM+ D R +LIKL DRLHNM TL+ + K+ ++ETL+I+ P
Sbjct: 121 ------QAENLRKMVLAMSKDIRVILIKLVDRLHNMRTLEYMKESKQIEKSRETLDIYAP 174
Query: 384 LANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAMVTSAIEKLEQALKDKN 441
+ANRLGI T K +LE+L K+L+PD + +L K+ + E + I+ LE+ + +
Sbjct: 175 IANRLGIQTIKAELEDLALKYLDPDGYYDLVKKVKMKKQSREEYINKVIKILEKKIDEVG 234
Query: 442 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 501
I + GR K YSI+ KM + DEI+D+ +R+IV++ +DCY L +VH W +
Sbjct: 235 IEAKIY-GRSKHFYSIYRKMKAQNRNFDEIYDLIAVRVIVDSVKDCYGVLGIVHTQWKPI 293
Query: 502 PGKMKDYITRPKFNGY 517
PG+ KDYI PK N Y
Sbjct: 294 PGRFKDYIAMPKPNMY 309
>gi|88797492|ref|ZP_01113081.1| RelA/SpoT protein [Reinekea blandensis MED297]
gi|88779664|gb|EAR10850.1| RelA/SpoT protein [Reinekea sp. MED297]
Length = 700
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 183/291 (62%), Gaps = 16/291 (5%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+ +A++ AE+AH GQMR SG+ Y+ H + A +L+ + + + A +LHD L+D +S
Sbjct: 23 IKRAYFYAEQAHEGQMRRSGERYITHPLAVANILSEMHMDHQSIMAAMLHDVLEDTAVSK 82
Query: 293 DYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
D I FG GVA+LV+GVSKL+ L SKL + A+ M LAM+ D R +
Sbjct: 83 DAIIEQFGEGVAELVDGVSKLTHLEFESKLEEQ---------AENFQKMVLAMSKDIRVI 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T+ A+P K++R ++ETLEI+ P+A RLGI+ +V+LENL F+++ P
Sbjct: 134 LVKLADRLHNMRTMGAMPPEKKRRKSRETLEIYAPIALRLGINDMRVELENLAFENMYPL 193
Query: 409 QHTELSSKLVECFDEAMVTSA-IEKLEQA-LKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + + S + + T A IE QA L D+ I+ V GR K L+SI+ KM +K+
Sbjct: 194 RASRIQSAIKKQIGARKETVAHIEGALQARLLDEGINANV-NGRQKHLFSIYQKMREKRK 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ EI D+Y R+I ++ + CY+ L +VH L+ VP + KDYI PK NGY
Sbjct: 253 SLKEILDVYAFRIITDSVDSCYRILGIVHNLYKPVPNRFKDYIAVPKINGY 303
>gi|358447867|ref|ZP_09158379.1| (p)ppGpp synthetase I, SpoT/RelA [Marinobacter manganoxydans
MnI7-9]
gi|357227926|gb|EHJ06379.1| (p)ppGpp synthetase I, SpoT/RelA [Marinobacter manganoxydans
MnI7-9]
Length = 713
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 177/293 (60%), Gaps = 12/293 (4%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + V +A+Y AE+AH GQMR SGD Y+ H + A +LA + + + A +LHD ++D
Sbjct: 22 RINQVRRAYYYAEQAHEGQMRKSGDRYITHPLAVAHILADLRLDHQSLMAAMLHDVIEDT 81
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+ D + FG VA+LV+GVSKL+Q+ +R +A+ M LAMA D R
Sbjct: 82 GIPKDALAEQFGDDVAELVDGVSKLTQIEFRSRAE------AQAENFQKMTLAMARDIRV 135
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM TL +P KRQR A ETL+I+ P+ANRLG+ + +LE+L F L P
Sbjct: 136 ILVKLADRLHNMRTLGPMPYEKRQRIATETLDIYAPIANRLGMHSICTELEDLGFTSLYP 195
Query: 408 DQHTELSSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
++ SK V+ ++ KL++ L+++ + +L GR K L SI+ KM K
Sbjct: 196 -MRSKYISKAVDKLRGSHREIIEDIRGKLQEKLEERGLPGRIL-GREKHLNSIYNKMKFK 253
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ + EI D+Y R+I + E+DCY+ L VH L+ +PG+ KDYI PK NGY
Sbjct: 254 QKSFHEIMDVYAFRIITDTEDDCYRILGAVHSLYKPLPGRFKDYIAMPKANGY 306
>gi|258405012|ref|YP_003197754.1| (p)ppGpp synthetase I SpoT/RelA [Desulfohalobium retbaense DSM
5692]
gi|257797239|gb|ACV68176.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfohalobium retbaense DSM
5692]
Length = 733
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 181/290 (62%), Gaps = 12/290 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH GQ R SG+PYL H +E A +LA + ++ +AAGLLHDTL+D +
Sbjct: 22 LIQKAYVFSASAHAGQRRLSGEPYLSHPLEVAHILAELRLDAPTIAAGLLHDTLEDTQSN 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ FG VA +VEGV+K+ ++ T+ + +A+ + M LAMA D R +++
Sbjct: 82 VSDLEEQFGEEVAQIVEGVTKIGKV------RFTSKEEAQAENIRKMILAMAEDIRVIIV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL K++ ++ET+EI+ PLANRLG+ KVQLE++ F++L PD +
Sbjct: 136 KLADRLHNMRTLQHQKGIKQRLISQETMEIYAPLANRLGLYRVKVQLEDISFQYLRPDVY 195
Query: 411 TELSSKLVECFDEAMVTSAIEK---LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
++ S + + + + IE+ L Q++ D+N + GR K LYSI KM ++ L+
Sbjct: 196 YQIKSGVEQ--HQTLGQQYIERVTGLIQSILDENSIPGRVSGRQKHLYSIFHKMQRQGLS 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++HD+ R+I+++ DCY L ++H +W VPG+ KDYI+ PK N Y
Sbjct: 254 LDQVHDLVAFRVILKSVRDCYAVLGLIHSIWKPVPGRFKDYISMPKANMY 303
>gi|90420858|ref|ZP_01228763.1| GTP pyrophosphokinase, Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Aurantimonas manganoxydans
SI85-9A1]
gi|90334833|gb|EAS48605.1| GTP pyrophosphokinase, Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Aurantimonas manganoxydans
SI85-9A1]
Length = 738
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 177/292 (60%), Gaps = 12/292 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + +A+ A + H Q RASGDPY H +E A +L + + VA LLHDT++D
Sbjct: 20 EALLNRAYVYAMQKHGAQKRASGDPYFSHPLEVAAILTEMHLDEATVAVALLHDTIEDTD 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I + FG + LVEG++KL +L +++ K +A+ L + LA+AD R +
Sbjct: 80 ATRKEIDQHFGPKIGQLVEGLTKLKRLDLVSK------KAAQAENLRKLLLAIADDIRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL + KR R ++ET++I+ PLA R+G+ + +LE+L F+H+N +
Sbjct: 134 LVKLADRLHNMRTLGHMAPEKRARISQETMDIYAPLAGRMGMHDMREELEDLAFRHVNLE 193
Query: 409 QHTELSSKLVECFDEAMVTSAIEKLEQALKDK---NISFLVLCGRHKSLYSIHCKMLKKK 465
+ +S++L E S I +E L D+ N + GR K YS+ KM +K
Sbjct: 194 AYETISARLEELNQRH--ASRIASIETDLTDRLRENGIVATVSGRQKKPYSVFSKMQRKA 251
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L+++++ DI+G R+IVE EE+CY+ L +VH+ WA VPG+ KDYI+ PK N Y
Sbjct: 252 LSLEQLSDIFGFRVIVETEEECYRTLGIVHRSWAMVPGRFKDYISTPKQNDY 303
>gi|206561355|ref|YP_002232120.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia J2315]
gi|444361973|ref|ZP_21162546.1| RelA/SpoT family protein [Burkholderia cenocepacia BC7]
gi|444373868|ref|ZP_21173181.1| RelA/SpoT family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198037397|emb|CAR53332.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia J2315]
gi|443591028|gb|ELT59960.1| RelA/SpoT family protein [Burkholderia cenocepacia K56-2Valvano]
gi|443597844|gb|ELT66253.1| RelA/SpoT family protein [Burkholderia cenocepacia BC7]
Length = 788
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 183/305 (60%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLGPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKNELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YS++ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|390449872|ref|ZP_10235472.1| (p)ppGpp synthetase I SpoT/RelA [Nitratireductor aquibiodomus RA22]
gi|389663445|gb|EIM74974.1| (p)ppGpp synthetase I SpoT/RelA [Nitratireductor aquibiodomus RA22]
Length = 750
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 179/305 (58%), Gaps = 10/305 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGHQRRASGDPYFSHPLEVAAILTDMHLDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + D I FG + LVEG++KL +L +++ K +A+ L
Sbjct: 66 IAVALLHDTIEDTSATRDEIDELFGPDIGKLVEGLTKLKRLDLVSK------KAHQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TLD +P KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLDHVPEHKRLRIAEETMDIYAPLAGRMGMQDMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAM-VTSAIEK-LEQALKDKNISFLVLCGRHK 452
+LE L F+H+NP+ ++ +L E F+ V AIE+ L + I V R K
Sbjct: 180 EELEELAFRHINPEAFRAVTERLAEFFERNRGVIKAIEEALSHLFAEHQIEATVKS-RQK 238
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
+S+ KM K L+ +++ DI+G R++V++ EDCY+AL V+H W+ VPG+ KDYI+ P
Sbjct: 239 KPWSVFRKMETKALSFEQLSDIFGFRVLVDSVEDCYRALGVIHSTWSMVPGRFKDYISTP 298
Query: 513 KFNGY 517
K N Y
Sbjct: 299 KQNDY 303
>gi|224476731|ref|YP_002634337.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421338|emb|CAL28152.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 729
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 190/307 (61%), Gaps = 17/307 (5%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
AK +L+ + +H V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSEEEYEH-------VLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMHLDG 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+ AG LHD ++D ++D + F VA +VEGV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTPYTFDDVKAMFNDEVAMIVEGVTKLKKVKYRSKEEQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 393 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE++ ++++ Q+ + + K EA + +AI+++ + +IS + GR
Sbjct: 183 IKWELEDIALRYIDGVQYFRIVNLMKKKRSEREAYIANAIDRISAEMDKMHISGEI-NGR 241
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +YSI+ KM+K+K D+I D+ +R+IV++ +DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRIIVDSIKDCYAVLGLVHTLWKPMPGRFKDYIA 301
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 302 MPKQNMY 308
>gi|405375362|ref|ZP_11029395.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Chondromyces apiculatus DSM 436]
gi|397086374|gb|EJJ17492.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 740
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 176/290 (60%), Gaps = 7/290 (2%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 138 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 197
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
LS KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 198 FFALSEKLNKRKKEREKYIEETCDVIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 256
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N Y
Sbjct: 257 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMY 306
>gi|392960862|ref|ZP_10326327.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|421054380|ref|ZP_15517348.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|421059720|ref|ZP_15522283.1| RelA/SpoT family protein [Pelosinus fermentans B3]
gi|421068769|ref|ZP_15530010.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|421071241|ref|ZP_15532361.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392439135|gb|EIW16869.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|392440738|gb|EIW18398.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|392447157|gb|EIW24411.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392454759|gb|EIW31581.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|392458415|gb|EIW34950.1| RelA/SpoT family protein [Pelosinus fermentans B3]
Length = 736
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 180/289 (62%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V +A+ A AH+GQ RASG+ Y+ H + A +L+ + ++ ++A LLHD ++D S
Sbjct: 27 IVQQAYELAVDAHKGQTRASGEEYICHPLGVAKILSELQIDALTISASLLHDVVEDTAFS 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + + FG VA LV+GV+KLS++ ++E + + MFLAMA D R VLI
Sbjct: 87 LEELEKLFGKEVAMLVDGVTKLSRIEYKSKEEQ------QLENFRKMFLAMAKDIRVVLI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL +P K++R ++ET EIF PLA+RLGIS+ K +LE+L F++L P+++
Sbjct: 141 KLADRLHNMRTLKHMPEHKQRRISQETHEIFAPLAHRLGISSVKWELEDLAFRYLEPEKY 200
Query: 411 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
EL K+ + E ++ AI+ L L D I + GR K YSI+ KMLK +
Sbjct: 201 YELVEKVKQKRREREQLINEAIKILSARLDDVEIKADI-QGRPKHFYSIYKKMLKGNKDL 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++V+ +DCY AL VVH LW +P + KDYI PK N Y
Sbjct: 260 SEIYDLSAVRILVDTVKDCYGALGVVHTLWKPLPLRFKDYIAMPKSNMY 308
>gi|260426691|ref|ZP_05780670.1| GTP pyrophosphokinase [Citreicella sp. SE45]
gi|260421183|gb|EEX14434.1| GTP pyrophosphokinase [Citreicella sp. SE45]
Length = 712
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 173/289 (59%), Gaps = 11/289 (3%)
Query: 233 VIKAFYEAERA-HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+I+A Y+ RA H GQ+R SG+PY H V A +L + + LLHDT++D S
Sbjct: 22 LIRAAYDFGRAMHEGQLRHSGEPYFTHPVAVAAILTEQQLDDATIITALLHDTIEDTRAS 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FG VADLV+GV+KL+ L ++S+T +A+ +F+AM+ D R +L+
Sbjct: 82 WKDIADRFGEDVADLVDGVTKLTNL------QLSSSETKQAENFRKLFMAMSKDLRVILV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ A+ K+ + A+ET++I+ PLA R+G+ + +LE+L F+ LNP+
Sbjct: 136 KLADRLHNMRTIKAMRAEKQVQKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNPEGR 195
Query: 411 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + EA ++ + L++ I V GR K YSI KM +K L
Sbjct: 196 ASIIRRFITLQKEAGDVIHRITGDMRHELEEAGIDAEVF-GRAKKPYSIWRKMQEKGLGF 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ DIYG R+I NE DCY+AL V+HQ W VPG+ KDYI++PK NGY
Sbjct: 255 SRLSDIYGFRVITRNEMDCYRALGVIHQRWRSVPGRFKDYISQPKSNGY 303
>gi|323485946|ref|ZP_08091279.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323693057|ref|ZP_08107277.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|355621474|ref|ZP_09046124.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
gi|323400736|gb|EGA93101.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323502938|gb|EGB18780.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|354823569|gb|EHF07899.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
Length = 761
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 192/310 (61%), Gaps = 9/310 (2%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E +E +A + H V KA+ A AH+ Q R SG+PY++H + A++LA +
Sbjct: 24 EKLYQELIAGIRKYHPSDDITMVEKAYDIAYNAHKEQKRRSGEPYIIHPLCVAIILADLE 83
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 330
+ + AG+LHD ++D ++ + + FG VA LV+GV+KL+Q+S + +
Sbjct: 84 LDKETIVAGILHDVVEDTVMTEEELTSIFGEEVALLVDGVTKLTQISW-----SMDKVEI 138
Query: 331 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 389
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A+RLG
Sbjct: 139 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYAPIADRLG 198
Query: 390 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVL 447
IS K +L++L K+L P+ + EL+ K+ D EA V + +++ ++D I V
Sbjct: 199 ISKIKTELDDLSLKYLEPEVYYELAEKVALRKDAREAFVQGIVFEVKSHMEDAGIEAKV- 257
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K +SI+ KM+ + T+++I+D++ +R++VE +DCY AL V+H+L+ +PG+ KD
Sbjct: 258 DGRVKHFFSIYKKMVNQDKTLEQIYDLFAVRIVVETVKDCYAALGVIHELYKPIPGRFKD 317
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 318 YIAMPKPNMY 327
>gi|94985409|ref|YP_604773.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus geothermalis DSM
11300]
gi|94555690|gb|ABF45604.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus geothermalis DSM
11300]
Length = 766
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 187/317 (58%), Gaps = 34/317 (10%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYD 293
+A+ A AH G R SG+PY+ H V A +LA +G ++ + AGLLHDT++D ++++
Sbjct: 33 RAYVFARDAHAGVNRKSGEPYITHPVAVATILARLGMDTDSIMAGLLHDTVEDVDGVTFE 92
Query: 294 YIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT---VEADRLHTMFLAMAD-ARAVL 349
I R FG V +VEG +K+S+LSK + T ++A+ L M +AM D R ++
Sbjct: 93 VIEREFGPDVRRIVEGETKVSKLSKQGSQQAEVRDTGRDLQAENLRQMLIAMTDDLRIIV 152
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+ K+QR A+ET++IF PLA+RLGI K +LE+L F++L PD
Sbjct: 153 VKLADRLHNMRTLGAMKPEKQQRIARETMDIFAPLAHRLGIGQIKWELEDLAFQYLQPDA 212
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKML 462
+ L S+L +E A++ A+ +L +AL+D + +S + + GR K L+SIH KM
Sbjct: 213 YAYLQSRLRTRQEERDALIQQAVTQLREALEDDLELPEWVSDIDIAGRSKHLWSIHNKMQ 272
Query: 463 KKKLTMDEIHDIYGLRLI-------VENEED---------------CYQALRVVHQLWAE 500
++ T+++I D+ +R+I V D CY + +VH +W
Sbjct: 273 RENKTLEQIFDLLAIRVILTPRPLSVPPGTDEKRRERAEETREKRICYHTVSIVHSIWTP 332
Query: 501 VPGKMKDYITRPKFNGY 517
+PG+ KDYI PK NGY
Sbjct: 333 LPGRFKDYIAVPKPNGY 349
>gi|359439886|ref|ZP_09229816.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20429]
gi|392535457|ref|ZP_10282594.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
arctica A 37-1-2]
gi|358038226|dbj|GAA66065.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20429]
Length = 701
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 173/290 (59%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V K++ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKSYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + ++T+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVITNIQHEIEARLEESGIKATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHSLYKPIETRFKDYIAVPKTNGY 303
>gi|332532744|ref|ZP_08408618.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332037771|gb|EGI74221.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 701
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 173/290 (59%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V K++ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKSYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + ++T+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVITNIQHEIEARLEESGIKATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHSLYKPIETRFKDYIAVPKTNGY 303
>gi|385330046|ref|YP_005883997.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Marinobacter adhaerens HP15]
gi|311693196|gb|ADP96069.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Marinobacter adhaerens HP15]
Length = 713
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 177/293 (60%), Gaps = 12/293 (4%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + V +A+Y AE+AH GQMR SGD Y+ H + A +LA + + + A +LHD ++D
Sbjct: 22 RINQVRRAYYYAEQAHEGQMRKSGDRYITHPLAVAHILADLRLDHQSLMAAMLHDVIEDT 81
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+ D + FG VA+LV+GVSKL+Q+ +R +A+ M LAMA D R
Sbjct: 82 GIPKDALAEQFGDDVAELVDGVSKLTQIEFRSRAE------AQAENFQKMTLAMARDIRV 135
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM TL +P KRQR A ETL+I+ P+ANRLG+ + +LE+L F L P
Sbjct: 136 ILVKLADRLHNMRTLGPMPYEKRQRIATETLDIYAPIANRLGMHSICTELEDLGFTSLYP 195
Query: 408 DQHTELSSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
++ SK V+ ++ KL++ L+++ + +L GR K L SI+ KM K
Sbjct: 196 -MRSKYISKAVDKLRGSHREIIEDIRGKLQEKLEERGLPGRIL-GREKHLNSIYNKMKFK 253
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ + EI D+Y R+I + E+DCY+ L VH L+ +PG+ KDYI PK NGY
Sbjct: 254 QKSFHEIMDVYAFRIITDTEDDCYRILGAVHSLYKPLPGRFKDYIAMPKANGY 306
>gi|313679281|ref|YP_004057020.1| (p)ppGpp synthetase I SpoT/RelA [Oceanithermus profundus DSM 14977]
gi|313151996|gb|ADR35847.1| (p)ppGpp synthetase I, SpoT/RelA [Oceanithermus profundus DSM
14977]
Length = 734
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 188/300 (62%), Gaps = 26/300 (8%)
Query: 240 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDYIFRT 298
A RAH GQ R SG+PY+ H V +LA + + + AGLLHDT++D +S++ I +
Sbjct: 37 AYRAHEGQFRRSGEPYITHPVAVTEILAELQMDPDSLIAGLLHDTVEDVESVSFETIRQR 96
Query: 299 FGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLH 357
FG VA +VEG +K+S+LSK+A T+ + +A+ L MF+AM D R +++KLADR H
Sbjct: 97 FGEDVARIVEGETKVSKLSKMA----TSVEDQQAENLRQMFIAMTRDLRIIIVKLADRTH 152
Query: 358 NMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL 417
NM TL+ +P K++R +KETLEIF P+A+RLGI K++LE+L F++L+P+++ L +L
Sbjct: 153 NMRTLEFMPPEKQRRISKETLEIFAPMAHRLGIGQIKLELEDLAFRYLHPEEYAALVERL 212
Query: 418 VECFD--EAMVTSAIEKLEQALKDK-----NISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
+V +A LE AL++ ++ + GR K L+SI KM +++ T+++
Sbjct: 213 AHHSQAHREVVDNAKGALEHALENDYVLGLSVDGFSVSGRTKHLFSIWKKMQREEKTLEQ 272
Query: 471 IHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I+D+ LR+I++ ++ CY L +VH LW +PG++KDYI +PK NGY
Sbjct: 273 IYDLLALRVILDPKPVASPEEAASREKQVCYHVLGLVHALWPPIPGRVKDYIAQPKPNGY 332
>gi|299144024|ref|ZP_07037104.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518509|gb|EFI42248.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 713
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 187/310 (60%), Gaps = 18/310 (5%)
Query: 215 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
+E L ++ + + + +AF A H+ Q R SG+PY++H A++LA + ++
Sbjct: 3 EELLEKIKIYNPSVEVELIEEAFNLASEHHKKQKRNSGEPYIVHPFNVALILADMNMDTA 62
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 334
+ AGLLHDT++D ++Y+ I + FG +ADLVEGV+KL +L N + +A+
Sbjct: 63 TIIAGLLHDTIEDTDVTYEDIKKEFGVEIADLVEGVTKLKKL------NYQTKQEKQAEN 116
Query: 335 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 393
+ M LAMA D R +++KLADRLHNM TL+ + K+ A ETLEI+ P+A+RLG+S
Sbjct: 117 IRKMVLAMARDIRVIIVKLADRLHNMRTLEYMTDAKKHEKALETLEIYAPIADRLGMSKI 176
Query: 394 KVQLENLCFKHLNPDQHTELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVL 447
K +LE+L ++L+P+ + + LVE + EA+++ ++E+ L I +
Sbjct: 177 KWELEDLSLRYLDPENYYQ----LVEMVNKRRHEREALISKITLEIEKNLNKIGIHADI- 231
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K+ YSI+ KM K DEI+D+ +R++V++ +DCY L VVH LW +PG+ KD
Sbjct: 232 HGRPKNFYSIYKKMKIKGKAFDEIYDLSAVRVLVDDIKDCYGVLGVVHTLWKPIPGRFKD 291
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 292 YIAMPKPNKY 301
>gi|13476436|ref|NP_108006.1| GTP pyrophosphokinase [Mesorhizobium loti MAFF303099]
gi|14027197|dbj|BAB54151.1| GTP pyrophosphokinase [Mesorhizobium loti MAFF303099]
Length = 742
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 180/304 (59%), Gaps = 8/304 (2%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGHQKRASGDPYFSHPLEVAAILTEMHMDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + I FG + LVEG++KL +L +++ K +A+ L
Sbjct: 66 IAVALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKKLDLVSK------KAEQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TLD +P KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLDHMPEAKRLRIAEETMDIYAPLAGRMGMQGMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAM-VTSAIEKLEQALKDKNISFLVLCGRHKS 453
+LE + F+++NP+ + ++++L E F+ V + IEK AL +K+ + R K
Sbjct: 180 EELEEIAFRYINPEAYRAVTARLAEIFERNKGVLTDIEKALSALFEKHAINAGVKSRQKK 239
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
+S+ KM K L+ +++ DI+G R++V+ EDCY+AL +H W+ VPG+ KDYI+ PK
Sbjct: 240 PWSVFRKMEAKALSFEQLSDIFGFRVVVDTVEDCYRALGAIHTTWSMVPGRFKDYISTPK 299
Query: 514 FNGY 517
N Y
Sbjct: 300 QNDY 303
>gi|209884971|ref|YP_002288828.1| GTP pyrophosphokinase [Oligotropha carboxidovorans OM5]
gi|209873167|gb|ACI92963.1| GTP pyrophosphokinase [Oligotropha carboxidovorans OM5]
Length = 754
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 54 EDLLNRAYVYAMKAHGEQKRASGDPYFSHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 113
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I + FG + LVEG++KL +L ++RE +A+ L + LA++ D R +
Sbjct: 114 STRAEIDQLFGTKIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAISSDVRVL 167
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+ D
Sbjct: 168 LVKLADRLHNMRTMEFMPPASRKRIAEETLDIYAPLAARMGMQEMREELEDLSFRVLDSD 227
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
H ++ +L D ++ +L +L+ I LV GR K YSI KM +K +
Sbjct: 228 AHEVVTQRLDALTDLNRNLIGEIETQLFASLEKHGIKALV-KGRRKQPYSIWTKMERKSV 286
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ D++G R+IVE E+CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 287 NFEQLSDVFGFRIIVETPEECYRALGVVHTCWPVVPGRFKDYISTPKQNDY 337
>gi|94967206|ref|YP_589254.1| (p)ppGpp synthetase SpoT/RelA [Candidatus Koribacter versatilis
Ellin345]
gi|94549256|gb|ABF39180.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Koribacter versatilis Ellin345]
Length = 740
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 187/295 (63%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KAF +++ H GQ RASG+PYL+H +E ++LA + ++T +AAGLLHD+++D +
Sbjct: 35 EIVKKAFEFSQKHHAGQTRASGEPYLVHPLEVGIILADMRLDTTAIAAGLLHDSVEDTSV 94
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I FG VA +VEGV+K+S++ +RE +A+ + M LAM D R VL
Sbjct: 95 TIEEIQEQFGEQVAHIVEGVTKISRIDFASREE------AQAENVRKMVLAMVDDIRVVL 148
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL L ++++ A+ETLEI+ P+A+RLG+ + +LE+L F +++P
Sbjct: 149 IKLADRLHNMRTLQHLSQERQEKIARETLEIYAPIAHRLGMGRVRGELEDLAFPYVDP-- 206
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQA-------LKDKNISFLVLCGRHKSLYSIHCKML 462
+ K VE E+ E LEQ LK+ +I V R K LYSI+ K++
Sbjct: 207 ---IGYKRVEEAVESRRKKGEEFLEQVKGVITAKLKENSIDARV-DSRIKRLYSINQKLI 262
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++++ +++++D+Y LR+I ++ DCY L ++H LW VPG++KD+I P+ N Y
Sbjct: 263 RQRIDVEQVYDMYALRIITKSVVDCYSILGIIHNLWRPVPGRIKDFIAMPRPNFY 317
>gi|428297512|ref|YP_007135818.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 6303]
gi|428234056|gb|AFY99845.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 6303]
Length = 758
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 176/291 (60%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H+GQ R SG+PY+ H V A LL +G + ++AAG LHD ++D +
Sbjct: 42 DLICRAFIFAYQLHQGQYRKSGEPYIYHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTEV 101
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAV 348
+ + I FG V LVEGV+KLS++ N SKT +A+ MFLAMA D R +
Sbjct: 102 TVEDIESKFGEEVRRLVEGVTKLSKI-------NFKSKTEGQAENFRRMFLAMAQDIRVI 154
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM T++ + R+R A+ET +I+ PLANRLGI +K +LE+L FK+L P
Sbjct: 155 VVKLADRLHNMRTMEVMSEESRRRNAQETRDIYAPLANRLGIWRFKWELEDLAFKYLEPQ 214
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
E+ + E D E + + + L + + I + GR K LYSI KM ++
Sbjct: 215 SFREMQKHVAEKRDAREDRLKTVSDMLRTRMVEAGIQCTDISGRPKHLYSIFQKMQRQNK 274
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV E+CY+AL V+H ++ +PG+ KDYI PK N Y
Sbjct: 275 EFNEIYDLAAIRVIVTTNEECYRALAVLHDVFRPIPGRFKDYIGLPKSNRY 325
>gi|53803680|ref|YP_114455.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Methylococcus capsulatus str. Bath]
gi|53757441|gb|AAU91732.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Methylococcus capsulatus str. Bath]
Length = 735
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+ KA+ A +AH GQ R SG+PY+ H + A++LA + ++ + A LLHD ++D L+
Sbjct: 43 IQKAYEVAAKAHEGQFRLSGEPYVCHPLSVAIILAEMRMDAKGIMAALLHDVIEDTPLTK 102
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + FGA VA+LV+GVSKL+QL +R +A+ + M LAM D R +++K
Sbjct: 103 EDLSARFGAEVAELVDGVSKLTQLDCKSRAE------AQAENVRKMVLAMVKDLRVIMVK 156
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TLD + +R R A+ETL+I+ P+A+RLG++ +++LENL F + P +H
Sbjct: 157 LADRLHNMRTLDVMNPGRRCRIARETLDIYAPIAHRLGMNEVRLELENLGFSAMYPMRHR 216
Query: 412 ELSSKLVECFDEAM-----VTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
L +C +A V + IE L+ LKD + + GR K LYS++ KM K
Sbjct: 217 VLE----QCVKKARGNRKEVLATIESTLKARLKDCGMPDARIIGREKHLYSLYQKMRSKH 272
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVL 524
L +++D+Y R++V++ ++CY+AL VH L+ +PG+ KDYI PK NGY VL
Sbjct: 273 LPFAQVYDVYAFRIVVDSPDECYRALGAVHNLYKPIPGRFKDYIALPKANGYQSLHTVL 331
>gi|392309353|ref|ZP_10271887.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
citrea NCIMB 1889]
Length = 700
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 172/290 (59%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKAYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMKLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG+ VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGSTVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEIF P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIFAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E LK+ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQTEIECRLKESGIEASV-SGREKHLYSIYRKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
E+ DIY R+ V + + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FTEVMDIYAFRINVNSMDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|357402877|ref|YP_004914802.1| GTP pyrophosphokinase (RelA/SpoT) [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|337769286|emb|CCB77999.1| GTP pyrophosphokinase (RelA/SpoT) [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 820
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 175/289 (60%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 106 RAFQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 165
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 166 LRRDFGEQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 217
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 218 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 277
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 278 VRLVAERAPKRDEYLAVVT---DQVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 333
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN Y
Sbjct: 334 AEIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMY 382
>gi|226939389|ref|YP_002794462.1| SpoT [Laribacter hongkongensis HLHK9]
gi|226714315|gb|ACO73453.1| SpoT [Laribacter hongkongensis HLHK9]
Length = 724
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 187/318 (58%), Gaps = 14/318 (4%)
Query: 203 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 262
D +VEG A+E L K FV AF A AH GQ R SG+PY+ H +
Sbjct: 13 DAMVEGQ----AEELLRTVATYLKPDDLPFVRAAFEFARDAHAGQTRKSGEPYITHPLSV 68
Query: 263 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 322
A +L ++ +AA LLHDT++D ++ + FG VA+LV+G+SKL +L ++E
Sbjct: 69 AQILTEWKLDAHGLAAALLHDTMEDTGVAKSTLAEKFGKQVAELVDGLSKLERLEYQSKE 128
Query: 323 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 381
+A+ M LAMA D R ++IKLADRLHNM TLD++ KR+R A ETL+++
Sbjct: 129 AR------QAENFRKMVLAMARDIRVIIIKLADRLHNMRTLDSMREEKRRRIALETLDVY 182
Query: 382 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKD 439
PLANR+G++ +LE+LCFK+L P++++ L+ + +V + + + L +
Sbjct: 183 TPLANRIGLNKVYRELEDLCFKYLYPNRYSVLAKAVRAARGNRRELVGKILTAIARKLVE 242
Query: 440 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 499
NI + GR K+LYSI+ KM +K+L+ E+ DIY R+IV + CY AL +H L+
Sbjct: 243 ANIEAGIR-GREKNLYSIYRKMQEKQLSFSEVLDIYAFRVIVNDIPSCYLALGALHSLYK 301
Query: 500 EVPGKMKDYITRPKFNGY 517
+PGK KDYI PK NGY
Sbjct: 302 PIPGKFKDYIAIPKSNGY 319
>gi|153854672|ref|ZP_01995922.1| hypothetical protein DORLON_01920 [Dorea longicatena DSM 13814]
gi|149752776|gb|EDM62707.1| RelA/SpoT family protein [Dorea longicatena DSM 13814]
Length = 781
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 183/286 (63%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A +AH Q R SG+PY++H + A++LA + + +AAG+LHD ++D + +
Sbjct: 69 KAYKLAVKAHGDQRRKSGEPYIIHPLWVAIILADLEMDKETIAAGMLHDVVEDTKFTEED 128
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I R FG VA LV+GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLA
Sbjct: 129 IRREFGDEVALLVDGVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLA 183
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL + K++ AKET++I+ P+A RLGIS K +L++L K+ P+ +L
Sbjct: 184 DRLHNMRTLQFMTPAKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFYDL 243
Query: 414 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+++ + E V +E++ +K+ NI V GR K +SI+ KM+ + T+D+I
Sbjct: 244 VNQINARKTEREEFVEQIVEEVSTHMKNANIKAEV-NGRVKHFFSIYKKMVNQDKTVDQI 302
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D++ +R+IVE+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 303 YDLFAVRIIVESVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMY 348
>gi|409990716|ref|ZP_11274054.1| (p)ppGpp synthetase I [Arthrospira platensis str. Paraca]
gi|291567306|dbj|BAI89578.1| (p)ppGpp 3-pyrophosphohydrolase [Arthrospira platensis NIES-39]
gi|409938424|gb|EKN79750.1| (p)ppGpp synthetase I [Arthrospira platensis str. Paraca]
Length = 764
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 177/290 (61%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H+GQ R SG+PY+ H + A LL +G+++ +VAAG LHD ++D +
Sbjct: 43 DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGLLRFLGSDTAMVAAGFLHDIIEDTDV 102
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG V LVEGV+KLS+ + +NT + +A+ MFLAMA D R ++
Sbjct: 103 TPEELESNFGPEVRHLVEGVTKLSKFNF----SNTTER--QAENFRRMFLAMAQDIRVIV 156
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ + K++ A ET EIF PLANRLGI K +LE+L FK++ P+
Sbjct: 157 VKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEA 216
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ ++ + E + + + L ++ I + GR K LY I+ KM ++
Sbjct: 217 YREIQIRVADRRAIREEKLAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQ 276
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI LRLIVE E+CY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 277 FHEIYDIAALRLIVETNEECYRALAIVHDSFRPIPGRFKDYIGLPKANRY 326
>gi|320334134|ref|YP_004170845.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus maricopensis DSM
21211]
gi|319755423|gb|ADV67180.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus maricopensis DSM
21211]
Length = 748
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 192/329 (58%), Gaps = 31/329 (9%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E L A + + + + +A+ A AH G +R SG+PY+ H V A++LA +G ++
Sbjct: 2 EDLRRAVQERSLEEREKIERAYEFARDAHDGVLRKSGEPYITHPVAVALILAELGMDTDA 61
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+ AG LHDT++D +++ I FG V +VEG +K+S+L+K T+ + +++ L
Sbjct: 62 ICAGFLHDTVEDTDVTFQQIEDHFGRDVRRIVEGETKVSKLTK----QTTSLQDQQSENL 117
Query: 336 HTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M +AM D R +++KLADRLHNM TL ++ K+QR ++ET+EI+ PLA+RLGI K
Sbjct: 118 RQMLIAMTDDIRIIVVKLADRLHNMRTLGSMRPDKQQRISRETIEIYAPLAHRLGIGQIK 177
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKD-----KNISFLVL 447
+LE+L FK+L P+ + +L+ +L D EA V A+++L +AL + + I + +
Sbjct: 178 WELEDLSFKYLEPEAYADLARRLRTRQDQREAHVKLALQQLREALTEDLELPEWIDNIDI 237
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI-------------------VENEEDCY 488
GR K LYSIH KM K+ +++I D+ +R+I V + CY
Sbjct: 238 AGRSKHLYSIHTKMRKEGKALEQIFDLLAIRVILTPKPVNAPEGKQKDRAEEVREKRVCY 297
Query: 489 QALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+L +VH +W +PG+ KDYI PK NGY
Sbjct: 298 HSLGIVHSMWTPIPGRFKDYIAVPKPNGY 326
>gi|331090638|ref|ZP_08339489.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401078|gb|EGG80673.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 766
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 184/290 (63%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A+ AH GQ+R SG+ Y++H ++LA + + +AAG+LHD ++D ++
Sbjct: 53 LIEKAYRIAKEAHEGQVRKSGEAYIIHPTWVGLILADLELDKETIAAGILHDVVEDTVMT 112
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVL 349
+ I FG+ VA LV+GV+KL QLS +A K V+A+ L MFLAMA D R +L
Sbjct: 113 EEEITEEFGSEVALLVDGVTKLGQLS------YSADKLEVQAENLRKMFLAMAKDIRVIL 166
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++ A+ET++I+ P+A RLGIS K +L++L K+ PD
Sbjct: 167 IKLADRLHNMRTLQFMRPEKQKEKARETMDIYAPIAQRLGISKIKTELDDLALKYSQPDV 226
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+L +++ + E V +E++ +K+ NI V GR K +SI+ KM+ + T
Sbjct: 227 FYDLVNQINARKTEREEFVQQIVEEVSTHMKNANIKAEVY-GRVKHFFSIYKKMVNQDKT 285
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D++ +R+IV++ +DCY AL +H+++ +PG+ KDYI PK N Y
Sbjct: 286 VDQIYDLFAIRIIVDSVKDCYAALGAIHEMYTPIPGRFKDYIAMPKPNMY 335
>gi|375105007|ref|ZP_09751268.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderiales bacterium
JOSHI_001]
gi|374665738|gb|EHR70523.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderiales bacterium
JOSHI_001]
Length = 761
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 179/304 (58%), Gaps = 17/304 (5%)
Query: 217 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 276
+L A+LK V +A+ A+ AH GQ RASG PY+ H + A L+A ++ V
Sbjct: 45 YLGKAELK-------LVREAYKFADSAHLGQFRASGQPYITHPIAVAGLVADWRLDAQAV 97
Query: 277 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 336
A L+HD ++D ++ + FGA ADLV+G++KL +L RE +A+
Sbjct: 98 MAALMHDAMEDCGVTKPELIERFGAPTADLVDGLTKLDKLQFSTREEG------QAESFR 151
Query: 337 TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 395
M LAMA D R +LIKLADRLHNM T+ A+ KR R A+ETL+I+ P+A+RLG++
Sbjct: 152 KMLLAMARDVRIILIKLADRLHNMRTMGAMQPNKRGRIARETLDIYAPIAHRLGLNQIYR 211
Query: 396 QLENLCFKHLNPDQHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKS 453
+L+ L F+HL+P +H L+ + +V ++E+A D + V GR K+
Sbjct: 212 ELQELSFEHLHPWRHGALTKAVQRARGHRRDIVARVQREVEKAFADAKMKVQV-GGREKT 270
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
+YSI+ KM +K + ++ DI+G R+IV DCY +L V+HQL+ VPG+ KDYI PK
Sbjct: 271 VYSIYRKMREKHTSFAQVSDIFGFRIIVPALPDCYLSLGVLHQLYKPVPGRFKDYIAIPK 330
Query: 514 FNGY 517
NGY
Sbjct: 331 ANGY 334
>gi|92117778|ref|YP_577507.1| (p)ppGpp synthetase SpoT/RelA [Nitrobacter hamburgensis X14]
gi|91800672|gb|ABE63047.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Nitrobacter hamburgensis X14]
Length = 769
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q+RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 62 EDLLNRAYVYAMKAHGEQIRASGDPYFSHPLEVAAILTGLKLDDATIVAALLHDTIEDTE 121
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I FG + LVEG++KL +L ++RE +A+ L + LA+A D R +
Sbjct: 122 ATRAEIDNMFGHEIGTLVEGLTKLKRLELVSREAK------QAENLRKLLLAIAEDVRVL 175
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL+ +P RQR A+ETL+I+ PLA R+G+ + +LE+L F L+P+
Sbjct: 176 LIKLADRLHNMRTLEFVPPASRQRIAEETLDIYAPLAGRMGMQEMREELEDLAFHTLDPE 235
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
H +S +L + + ++ +L +L +K I+ V GR K +SI KM +K +
Sbjct: 236 AHAVVSQRLDALAERNRNLIGEIENQLTTSLANKGITAHV-NGRRKQPFSIWTKMERKSV 294
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+++ + CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 295 GFEQLSDIFGFRVVMPDVGACYRALGVVHTTWPVVPGRFKDYISTPKQNDY 345
>gi|410667595|ref|YP_006919966.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
gi|409105342|gb|AFV11467.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
Length = 726
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 183/304 (60%), Gaps = 10/304 (3%)
Query: 217 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 276
LA + + F + V +A+ A+ AHRGQ R SG+ ++ H ++ A +LA + + T +
Sbjct: 6 LLAKIEQYYPNFDRELVERAYLFAKEAHRGQFRNSGEAFIEHPLQVACILADLQLDITSI 65
Query: 277 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 336
AGLLHD ++D S I FG V LV GV+KL ++ ++E+ A+ L
Sbjct: 66 VAGLLHDVVEDTNTSLQDIETDFGPEVRFLVAGVTKLGKIEYKSKEDR------HAENLR 119
Query: 337 TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 395
MFLAMA D R +LIKLADRLHN+ TL A + K++ A+ETLEIF P+A+RLGI K
Sbjct: 120 KMFLAMARDIRVILIKLADRLHNLRTLGAHEVPKQREIARETLEIFAPVAHRLGIYKIKW 179
Query: 396 QLENLCFKHLNPDQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKS 453
++E+L F++L PD++ EL+ ++ + E + I KL + L + I + GR K+
Sbjct: 180 EMEDLAFRYLEPDKYYELADRIAKKRKEREDYINLVITKLREKLTEAGIKAEI-SGRPKN 238
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
YSI+ KM+ + + EI+D+ +R+IVE ++CY L +VH +W +PG+ KDYI PK
Sbjct: 239 FYSIYRKMVDQGKDLSEIYDLVAVRVIVETVKECYATLGIVHTMWKPIPGRFKDYIAMPK 298
Query: 514 FNGY 517
N Y
Sbjct: 299 QNMY 302
>gi|304309936|ref|YP_003809534.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [gamma
proteobacterium HdN1]
gi|301795669|emb|CBL43868.1| Guanosine-3\',5\'-bis(Diphosphate) 3\'-pyrophosphohydrolase [gamma
proteobacterium HdN1]
Length = 703
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 174/286 (60%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A AH GQ R +GDPY+ H + +M+LA + ++ + AGLLHD ++D +S +
Sbjct: 24 KAYTFAASAHEGQFRRTGDPYIAHPLAVSMILADMHMDAPSIMAGLLHDVIEDTHVSKEA 83
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA+LV+GVSK+ + + +A M LAM D R +L+KLA
Sbjct: 84 VKQEFGETVANLVDGVSKIGAIK------FESKAEAQAQNFRKMMLAMTKDIRVILVKLA 137
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL L KR+R A ETLEI+ P+A RLG++ +++LE+L F+ + P + T +
Sbjct: 138 DRLHNMRTLAVLHPQKRRRIATETLEIYAPIAYRLGMNEVRIELEDLGFQAIYPMRATRI 197
Query: 414 SSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+++ + M+ S E L AL+ ++ V+ GR K LYSI+ KM ++ EI
Sbjct: 198 KKAIIKARGTRKDMIVSIQEMLVHALEHNHLPARVI-GREKHLYSIYQKMKTQRKPFSEI 256
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+YG R+IV+N + CY+AL VH L+ +PG+ KDYI PK NGY
Sbjct: 257 MDVYGFRIIVDNVDACYRALGTVHNLYTPIPGRFKDYIAIPKSNGY 302
>gi|78065581|ref|YP_368350.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia sp. 383]
gi|77966326|gb|ABB07706.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. 383]
Length = 788
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 182/305 (59%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLPPEEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 289
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
++YS++ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 513 KFNGY 517
K NGY
Sbjct: 350 KINGY 354
>gi|15806838|ref|NP_295561.1| GTP pyrophosphokinase [Deinococcus radiodurans R1]
gi|6459617|gb|AAF11392.1|AE002024_3 GTP pyrophosphokinase [Deinococcus radiodurans R1]
Length = 787
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 188/316 (59%), Gaps = 34/316 (10%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDY 294
A+ A AH G MR SG+PY+ H V A++LA +G ++ + AGLLHDT++D ++++
Sbjct: 59 AYVFARDAHAGVMRKSGEPYITHPVAVAIILARLGMDTDSLMAGLLHDTVEDVEGVTFEV 118
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTA---SKTVEADRLHTMFLAM-ADARAVLI 350
I R FG V +VEG +K+S+LSK + + ++A+ L M +AM D R +++
Sbjct: 119 IERNFGPDVRRIVEGETKVSKLSKQGNQQAEVPGDGRDMQAENLRQMLIAMTVDLRIIVV 178
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL ++ K+QR A+ET+EIF PLA+RLGI K +LE+L F++L+PD +
Sbjct: 179 KLADRLHNMRTLGSMKPEKQQRIARETMEIFAPLAHRLGIGRIKWELEDLSFRYLHPDAY 238
Query: 411 TELSSKLVECFDE--AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLK 463
L ++L +E ++ +A+ +L+ AL+D + + + + GR K L+SIH KM K
Sbjct: 239 EYLQTRLRTRQEERDELIVNAVAELQDALEDDLELLEWVEDIDIAGRSKHLWSIHNKMQK 298
Query: 464 KKLTMDEIHDIYGLRLIVENEE----------------------DCYQALRVVHQLWAEV 501
+ +++I D+ LR+I++ CY L VVH +W +
Sbjct: 299 EGKALEQIFDLLALRVILKPRPLTVPEGVEESRRERAEENREKRVCYHTLSVVHSMWTPL 358
Query: 502 PGKMKDYITRPKFNGY 517
PG++KDYI PK NGY
Sbjct: 359 PGRVKDYIAVPKPNGY 374
>gi|365873417|ref|ZP_09412950.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
gi|363983504|gb|EHM09711.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
Length = 760
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 176/286 (61%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A A AHR Q R SG+PY++H + A +LA + + + A LLHD L+D + +
Sbjct: 65 EALVFAANAHRDQRRHSGEPYVVHSISVAAILADMELDVDTLCAALLHDVLEDTEIGKEE 124
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V +V+GV+KL +L+ + E+ +A+ L MFL MA D R VLIKLA
Sbjct: 125 MQSRFGEDVVTMVDGVTKLGKLAFKSMED------YQAENLRKMFLVMAKDIRVVLIKLA 178
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL A K+ AKETLEI+ PLA+RLGI K +LE+LCFK L P+ + E+
Sbjct: 179 DRLHNMRTLQAHRRDKQITIAKETLEIYAPLAHRLGIYNVKRELEDLCFKILEPEIYYEI 238
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + EA++ A++ L+Q LK++ I L GR K YSI+ KM +K L+++++
Sbjct: 239 RRRVRKKLPEREAIIKQALDVLQQKLKEEGIEA-SLSGRPKHFYSIYEKMRRKNLSLEQL 297
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ LR++V +CYQ L +VH +W +PG+ DYI PK N Y
Sbjct: 298 YDLLALRVVVGTVAECYQVLGLVHTIWKPIPGQFDDYIANPKSNMY 343
>gi|442804848|ref|YP_007372997.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740698|gb|AGC68387.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 759
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 187/290 (64%), Gaps = 12/290 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A AH GQ R+SG+P+++H ++ A +LA + ++ V AG+LHDT++D+ +
Sbjct: 55 LIEKAYKFACIAHEGQKRSSGEPFVIHPLQVAYILAEMEMDTATVVAGMLHDTVEDSSFT 114
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ + FG +A+LV+GV+KL+++ T + ++A+ L MFLAM+ D R ++I
Sbjct: 115 YENTLKNFGEEIANLVDGVTKLAKIP------YTNKQEIQAENLRKMFLAMSKDIRVIII 168
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL P K+ A+ETL+I+ PLA+RLGI K +LE+L F++L+ ++
Sbjct: 169 KLADRLHNMRTLKYKPREKQIEIAQETLDIYAPLAHRLGIYKVKWELEDLSFRYLHEKEY 228
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLT 467
+L+ K+ + E IE + + + +K + + + GR K LYSI+ KM ++
Sbjct: 229 YDLAEKIAKKRKER--EEYIENIMKTVAEKAMEMGIEAHIDGRPKHLYSIYMKMKRQHKE 286
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D++ +R+IV +DCY L +VH+L+ +PG+ KDYI+ PK N Y
Sbjct: 287 LDQIYDLFAIRVIVNTVKDCYAVLGLVHELYKPMPGRFKDYISMPKPNMY 336
>gi|237806954|ref|YP_002891394.1| (p)ppGpp synthetase I SpoT/RelA [Tolumonas auensis DSM 9187]
gi|237499215|gb|ACQ91808.1| (p)ppGpp synthetase I, SpoT/RelA [Tolumonas auensis DSM 9187]
Length = 715
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 124/285 (43%), Positives = 175/285 (61%), Gaps = 10/285 (3%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
AF A AH GQ R+SG+PY+ H V A +LA + + ++A L+HD ++D ++ + +
Sbjct: 26 AFLVARDAHEGQTRSSGEPYITHPVAVATILAEMHLDYETISAALMHDVIEDTPVTKEQL 85
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
FG VA+LV GVSKL +L R++ K +A+ M +AM D R +LIKLAD
Sbjct: 86 ALQFGPAVAELVSGVSKLDKLK--FRDH----KEAQAENFRKMVMAMVQDIRVILIKLAD 139
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL- 413
R HNM TL +L KR+R A+ETLEIF P+ANRLGI T+K +LE L F+ L P + L
Sbjct: 140 RTHNMRTLGSLRPDKRRRIARETLEIFSPIANRLGIHTFKSELEELGFEALYPMRARILR 199
Query: 414 -SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 472
S K + ++ S +++ L+D I V CGR K+LYSI+ KM+KK+L E+
Sbjct: 200 ESVKRARGNRKEVIDSVYKEIAGRLQDAGIKAEV-CGREKNLYSIYNKMVKKELRFYEVM 258
Query: 473 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV++ + CY+ L +H L+ PG+ KDYI PK NGY
Sbjct: 259 DIYAFRVIVDDIDTCYRVLGQMHSLYKPRPGRFKDYIAIPKTNGY 303
>gi|427737096|ref|YP_007056640.1| RelA/SpoT family (p)ppGpp synthetase [Rivularia sp. PCC 7116]
gi|427372137|gb|AFY56093.1| (p)ppGpp synthetase, RelA/SpoT family [Rivularia sp. PCC 7116]
Length = 805
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 192/329 (58%), Gaps = 19/329 (5%)
Query: 200 NMEDNIVEGNLETYAKEFLANAQLKHKIFR-------EDFVIKAFYEAERAHRGQMRASG 252
NM +V+ + E+L + L K+ R +D + +AF A H GQMR SG
Sbjct: 53 NMNPTVVDSQINIPLPEWLEDC-LNSKVDRSDPQAADKDLISRAFRFAYHLHEGQMRKSG 111
Query: 253 DPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSK 312
+PY+ H V A +L +G +S ++AAG LHD ++D ++ + I FG V LVEGV+K
Sbjct: 112 EPYICHPVAVAGILRDLGGSSVMIAAGFLHDVVEDTEITIEEIEERFGEEVRRLVEGVTK 171
Query: 313 LSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 370
LS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL+A+P KR
Sbjct: 172 LSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEAMPEHKR 224
Query: 371 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTS 428
+ A ET EIF PLANRLGI K +LE+L FK+L D + ++ + + E +T+
Sbjct: 225 RAKALETREIFAPLANRLGIWHVKWELEDLAFKYLETDSYRQIQQLVADKRAAREERLTN 284
Query: 429 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 488
E L LK I + L GR K LYSI+ KM ++ EI D+ LR+IV+ E+CY
Sbjct: 285 VTETLRSRLKKAGIECVDLSGRPKHLYSIYQKMQRQNKEFHEIFDLAALRIIVKTNEECY 344
Query: 489 QALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+AL +VH + +PG+ KDYI PK N Y
Sbjct: 345 RALALVHDSFRPIPGRFKDYIGLPKPNRY 373
>gi|291301292|ref|YP_003512570.1| (p)ppGpp synthetase I SpoT/RelA [Stackebrandtia nassauensis DSM
44728]
gi|290570512|gb|ADD43477.1| (p)ppGpp synthetase I, SpoT/RelA [Stackebrandtia nassauensis DSM
44728]
Length = 787
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 77 RAYATAERLHEGQFRKSGDPYITHPLAVASILAELGMDTTSLVAALLHDTVEDTDYTLEA 136
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 137 ITEDFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 188
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL LP K+++ A ETLEI PLA+RLG++T K +LE+L F L ++ E+
Sbjct: 189 DRLHNMRTLTFLPAAKQEQKAHETLEILAPLAHRLGMNTIKWELEDLSFATLYRKRYAEI 248
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ E E ++ +++ L++ I V GR K LYSI+ KM+ + +I
Sbjct: 249 GRLVAEHTPQREMLLAQVTDRVNADLREARIKATV-SGRPKHLYSIYQKMIVRGRDFSDI 307
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++V +E DCY AL V+H W VPG+ KD+I PKFN Y
Sbjct: 308 YDLVGIRILVNSERDCYAALGVIHANWQPVPGRFKDFIAMPKFNMY 353
>gi|431794423|ref|YP_007221328.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784649|gb|AGA69932.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 729
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 174/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ AE AHRGQ+R SG+ Y+ H +E A +L + + +AA LHD ++D S
Sbjct: 20 LVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVVEDTKYS 79
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG+ VA LV+GV+KL ++ ++E ++ + L MFLAMA D R +LI
Sbjct: 80 VEDIEKEFGSQVALLVDGVTKLGRIEYKSKEE------LQVENLRKMFLAMAKDIRVILI 133
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL K++ A+ET+EIF PLANRLGI K +LE+L F++L P ++
Sbjct: 134 KLADRLHNMRTLKFHSEKKQKEIAQETIEIFAPLANRLGIFRIKWELEDLSFRYLKPQEY 193
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+LS L E + I +L L + I + GR K YSI+ KM+ + +
Sbjct: 194 YDLSEGIALKRAEREVQINEVITQLRSRLSEVGIRADI-SGRPKHFYSIYRKMINQHKEL 252
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ DCY AL ++H LW +PG+ KDYI PK N Y
Sbjct: 253 SEIYDLTAVRVIVDSVNDCYGALGIIHTLWKPLPGRFKDYIAMPKPNMY 301
>gi|89895197|ref|YP_518684.1| hypothetical protein DSY2451 [Desulfitobacterium hafniense Y51]
gi|219669627|ref|YP_002460062.1| (p)ppGpp synthetase I SpoT/RelA [Desulfitobacterium hafniense
DCB-2]
gi|423073423|ref|ZP_17062162.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
gi|89334645|dbj|BAE84240.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539887|gb|ACL21626.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium hafniense
DCB-2]
gi|361855729|gb|EHL07687.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
Length = 726
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 174/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ AE AHRGQ+R SG+ Y+ H +E A +L + + +AA LHD ++D +
Sbjct: 20 LVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVVEDTHYT 79
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I R FG+ VA LV+GV+KL ++ ++E ++ + L MFLAMA D R +LI
Sbjct: 80 NEDIEREFGSQVAILVDGVTKLGRIEYKSKEE------LQVENLRKMFLAMAKDIRVILI 133
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL K++ A ETLEIF PLANRLGI K +LE+L F++L P ++
Sbjct: 134 KLADRLHNMRTLKFHSEKKQKEIALETLEIFAPLANRLGIFRIKWELEDLSFRYLKPQEY 193
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+LS L E + I +L + L + I + GR K YSI+ KM+ + +
Sbjct: 194 YDLSEGIALKRAEREVQINEVISQLSKRLAEVGIKADI-SGRPKHFYSIYRKMINQHREL 252
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI PK N Y
Sbjct: 253 SEIYDLTAVRVIVDSVNDCYGALGIIHTMWKPLPGRFKDYIAMPKPNMY 301
>gi|380302298|ref|ZP_09851991.1| (p)ppGpp synthetase, RelA/SpoT family protein [Brachybacterium
squillarum M-6-3]
Length = 809
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 177/294 (60%), Gaps = 14/294 (4%)
Query: 229 REDF--VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
+ED V +A+ AERAHRGQ R SGDPY+ H V A +LA +G+ + VVAA LLHDT++
Sbjct: 76 KEDLGLVQRAYTVAERAHRGQQRKSGDPYITHPVSVATILAELGSPAEVVAAALLHDTVE 135
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 345
D S D + FG +A +V+GV+KL ++ T + +A+ + M +AM+ D
Sbjct: 136 DTDYSLDQLRADFGEVIAVMVDGVTKLDKV--------TYGEAAQAETVRKMIVAMSRDV 187
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R +LIKLADRLHN T +P +R AKETLEI+ PLA+RLG++T K +LE+ F+ L
Sbjct: 188 RVLLIKLADRLHNARTWKYVPAASAERKAKETLEIYAPLAHRLGLNTIKWELEDRSFQVL 247
Query: 406 NPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
P + E+ + + + E + S ++ + LK I V GR K YSI+ KM+
Sbjct: 248 YPKVYEEIVALVAQHAPAREQYLRSVSGQILEDLKQARIKAEV-TGRPKHYYSIYQKMIV 306
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +I+D+ G+R++V+ DCY L +H W+ VPG+ KDYI PKFN Y
Sbjct: 307 RGRDFADIYDLVGVRVLVDTVRDCYAVLGTLHARWSPVPGRFKDYIALPKFNLY 360
>gi|392429319|ref|YP_006470333.1| GTP pyrophosphokinase [Streptococcus intermedius JTH08]
gi|419776206|ref|ZP_14302129.1| GTP diphosphokinase [Streptococcus intermedius SK54]
gi|423071137|ref|ZP_17059912.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius F0413]
gi|355364499|gb|EHG12231.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius F0413]
gi|383846414|gb|EID83813.1| GTP diphosphokinase [Streptococcus intermedius SK54]
gi|391758468|dbj|BAM24085.1| GTP pyrophosphokinase [Streptococcus intermedius JTH08]
Length = 738
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA A HRGQ R SG+PY++H ++ A +LA + ++ VA G LHD ++D +
Sbjct: 27 LVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGFLHDVVEDTNAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FG V +V+GV+KL ++ ++ E A + M +AM+ D R +L+
Sbjct: 87 LDDLDREFGHDVRGIVDGVTKLGKVKYMSHEEQLA------ENHRKMLMAMSKDIRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++LNP +
Sbjct: 141 KLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLAFRYLNPTEF 200
Query: 411 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++S + E E +V + K+E D+N+ + GR K +YSI+ KM KK
Sbjct: 201 YKISHLMKEKRREREELVDEVVRKIETYASDRNLRGNIY-GRPKHIYSIYRKMQDKKKRF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R I++ + D Y L +H+LW +PG+ KDYI K NGY
Sbjct: 260 DEIYDLIAIRCILDTQSDVYAMLGYIHELWRPMPGRFKDYIANRKANGY 308
>gi|424788484|ref|ZP_18215238.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius BA1]
gi|422112705|gb|EKU16477.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius BA1]
Length = 738
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA A HRGQ R SG+PY++H ++ A +LA + ++ VA G LHD ++D +
Sbjct: 27 LVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGFLHDVVEDTNAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FG V +V+GV+KL ++ ++ E A + M +AM+ D R +L+
Sbjct: 87 LDDLDREFGHDVRGIVDGVTKLGKVKYMSHEEQLA------ENHRKMLMAMSKDIRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++LNP +
Sbjct: 141 KLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLAFRYLNPTEF 200
Query: 411 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++S + E E +V + K+E D+N+ + GR K +YSI+ KM KK
Sbjct: 201 YKISHLMKEKRREREELVDEVVRKIETYASDRNLRGNIY-GRPKHIYSIYRKMQDKKKRF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R I++ + D Y L +H+LW +PG+ KDYI K NGY
Sbjct: 260 DEIYDLIAIRCILDTQSDVYAMLGYIHELWRPMPGRFKDYIANRKANGY 308
>gi|223044113|ref|ZP_03614152.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
gi|417907908|ref|ZP_12551675.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
gi|222442507|gb|EEE48613.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
gi|341594995|gb|EGS37673.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
Length = 729
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA + +AI K+E ++ N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYIDNAINKIEAEMEKMNLSGEI-NGRPKHIYSIYRKMMKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|212702010|ref|ZP_03310138.1| hypothetical protein DESPIG_00012 [Desulfovibrio piger ATCC 29098]
gi|212674525|gb|EEB35008.1| RelA/SpoT family protein [Desulfovibrio piger ATCC 29098]
Length = 719
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 176/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A AH GQ R SG+PYL H + A LA +G + VAAGLLHDT++D
Sbjct: 21 ELIQKAYVFAATAHAGQTRLSGEPYLSHPLAVAYTLADMGFDEPTVAAGLLHDTVEDTGT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I FG VAD+V+GV+K+S + +E +A+ + M LAM+ D R ++
Sbjct: 81 TIEEIDDKFGEDVADIVDGVTKISMIVFENKEE------AQAENIRKMILAMSHDMRVLM 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TLD K++R A+ET++I+ PLANRLG+ K QLE+L FK+L PD
Sbjct: 135 VKLADRLHNMSTLDFQKPHKQRRIAQETMDIYAPLANRLGLYLLKRQLEDLSFKYLRPDI 194
Query: 410 HTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ L + ++ ++ + ++ L + V GR K YSI+ KM + LT
Sbjct: 195 YNQIDHWLDAHQVVEKQIIEKVVSLIQDLLASNGLEGQVY-GRIKHKYSIYKKMQSQSLT 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DE+HDI R++V++ DCY L +VH W V G+ KDYI+ PK NGY
Sbjct: 254 LDEMHDIMAFRVLVKDIRDCYAVLGLVHSQWKPVHGRFKDYISMPKANGY 303
>gi|386856222|ref|YP_006260399.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
gi|379999751|gb|AFD24941.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
Length = 753
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 187/317 (58%), Gaps = 34/317 (10%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYD 293
+AF A AH G R SG+PY+ H V A++LA +G +S + AGLLHDT++D +++
Sbjct: 21 EAFEFARDAHAGVNRKSGEPYITHPVAVAVILAKLGMDSDSLMAGLLHDTVEDVEGVTFA 80
Query: 294 YIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT---VEADRLHTMFLAM-ADARAVL 349
I FGA V +VEG +K+S+LSK + S T V+A+ L M +AM AD R ++
Sbjct: 81 GIEALFGADVRRIVEGETKVSKLSKQGSQAAQVSDTGRDVQAENLRQMLVAMTADIRIIV 140
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL ++ K+ R A+ET+EIF PLA+RLGI K +LE+L F++LNPD
Sbjct: 141 VKLADRLHNMRTLGSMKPEKQARIARETMEIFAPLAHRLGIGQIKWELEDLSFRYLNPDA 200
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKML 462
+ LS++L + EA++ A+ +L + L D + +S + + GR K L+SIH KM
Sbjct: 201 YEYLSTRLRTRQEEREALIAEAVAQLREGLDDDLELHEWVSGIDIAGRSKHLWSIHNKMQ 260
Query: 463 KKKLTMDEIHDIYGLRLIVENEE----------------------DCYQALRVVHQLWAE 500
K+ +++I D+ +R+I+ + CY + VVH +W
Sbjct: 261 KEGKGLEQIFDLLAIRVILRPRDLVVPPGTDEKRRERAEETREKRICYHTVSVVHSMWTP 320
Query: 501 VPGKMKDYITRPKFNGY 517
+PG+ KDYI PK NGY
Sbjct: 321 LPGRFKDYIAVPKPNGY 337
>gi|238922253|ref|YP_002935767.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
gi|238873925|gb|ACR73633.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
Length = 770
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 182/287 (63%), Gaps = 11/287 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A +AH GQ R SG+PY++H + A++LA + + + AGLLHD ++D ++ +
Sbjct: 60 KAYETARKAHEGQFRKSGEPYIIHPLCVAIILAELELDKESIIAGLLHDVVEDTVMTSED 119
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKL 352
+ + FG VA LV+GV+KL+QL N K V+A+ L MFLAMA D R +LIKL
Sbjct: 120 VAKEFGDEVALLVDGVTKLTQL------NYQHDKIEVQAENLRKMFLAMAKDIRVILIKL 173
Query: 353 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 412
ADRLHNM T+ K+ ++ET+EI+ P+A+RLGIS KV+L++L K+L PD + +
Sbjct: 174 ADRLHNMRTMQYQSPAKQIEKSRETMEIYAPIAHRLGISKIKVELDDLSMKYLMPDVYND 233
Query: 413 LSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
L + L EA + S I+++ + + I + GR K +SI+ KM+ + T+D+
Sbjct: 234 LVEQVNLNRPGREAFIKSIIKEVGMHISNAGIEAEI-DGRVKHFFSIYRKMVNQNKTLDQ 292
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I+DI+ +R+ V+ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 293 IYDIFAVRIKVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNNY 339
>gi|414160989|ref|ZP_11417252.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876668|gb|EKS24566.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 729
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 189/307 (61%), Gaps = 17/307 (5%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
AK +L+ + +H V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSKEEYEH-------VLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMHLDG 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+ AG LHD ++D ++D + F VA +VEGV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTPYTFDDVKAMFNDEVAMIVEGVTKLKKVKYRSKEEQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 393 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE++ ++++ Q+ + + K EA + +AI+ + + +IS + GR
Sbjct: 183 IKWELEDIALRYIDGVQYFRIVNLMKKKRSEREAYIANAIDNIRAEMDKMHISGEI-NGR 241
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +YSI+ KM+K+K D+I D+ +R+IV++ +DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRIIVDSIKDCYAVLGLVHTLWKPMPGRFKDYIA 301
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 302 MPKQNMY 308
>gi|82523943|emb|CAI78665.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[uncultured delta proteobacterium]
Length = 713
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 184/292 (63%), Gaps = 12/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ + H+GQ+R SG+PYL H +E A +LA + ++ + +GLLHDT++D
Sbjct: 21 EMIKKAYVYSAAVHQGQVRLSGEPYLTHPMEVAGILADMKMDAATIISGLLHDTVEDTLS 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG VA LV G++KLS +S ++E +A+ M LAM+ D R +L
Sbjct: 81 TVEQVEEEFGKDVAFLVSGLTKLSLISFRSQEER------QAENFRKMILAMSSDIRILL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
++LADR+HNM TL PL KR A+ET++++ PLANRLGI+ K +LE+L F++L+P+
Sbjct: 135 VRLADRIHNMRTLQYQPLEKRVYIARETIDVYAPLANRLGINWIKTELEDLSFQYLSPEA 194
Query: 410 HTELSSKLVECFD-EAMVTSAIEKL-EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ELS ++V+ + T ++KL + LK I V GR K LY I+ KM ++ L
Sbjct: 195 YNELSMRVVQSNESRHRYTEEVKKLISEELKKFKIEGEV-EGRAKHLYGIYKKMHEQHLN 253
Query: 468 MDEIHDIYGLRLIVENEED--CYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DE++D+ R+I++++++ CY+ L VVH LW VPG+ KDYI PK N Y
Sbjct: 254 FDEVYDLIAFRVILDSDQEKGCYETLSVVHSLWKPVPGRFKDYIAMPKANNY 305
>gi|329897893|ref|ZP_08272243.1| GTP pyrophosphokinase [gamma proteobacterium IMCC3088]
gi|328921019|gb|EGG28438.1| GTP pyrophosphokinase [gamma proteobacterium IMCC3088]
Length = 702
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 181/295 (61%), Gaps = 10/295 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +AF+ AE+AH GQ R SGDPY+ H + A +LA + + + AGLLHD ++D +S
Sbjct: 23 VKRAFFYAEQAHFGQTRRSGDPYVTHPLAVACILAEMHMDPQSIMAGLLHDVIEDTGISK 82
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+GVSKL+Q+ N+ A K +A+ M LAMA D R +L+K
Sbjct: 83 TALAEQFGDTVAELVDGVSKLTQIEF----NSLAEK--QAENFQKMALAMARDIRVILVK 136
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL L K +R AKETLEI+ P+A RLG++T +++ E+L FK L+P ++
Sbjct: 137 LADRLHNMRTLGVLNPAKSRRIAKETLEIYAPIAMRLGMNTVRMEFEDLGFKALHPMRYE 196
Query: 412 ELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+ + + + +V + ++E AL + S V GR K LYSI+ KM +K+ +
Sbjct: 197 RIMAARAKARGHRKELVENIRSQIEAALHREGHSATV-TGREKHLYSIYQKMKEKRKSFA 255
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVL 524
EI DIY R+IV++ + CY+ L VH ++ VPG+ DYI PK NGY VL
Sbjct: 256 EIMDIYAFRIIVDSVDTCYRVLGCVHSIYKPVPGEFTDYIAMPKANGYQSLHTVL 310
>gi|226942443|ref|YP_002797516.1| guanosine 3,5-bis-pyrophosphate (ppGpp) synthetase, RelA/SpoT
protein [Azotobacter vinelandii DJ]
gi|226717370|gb|ACO76541.1| guanosine 3,5-bis-pyrophosphate (ppGpp) synthetase, RelA/SpoT
protein [Azotobacter vinelandii DJ]
Length = 702
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 178/294 (60%), Gaps = 18/294 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+Y AE+AH GQ R SG+PY+ H + A +LA + + + A +LHD ++D +
Sbjct: 21 NLVRRAYYYAEQAHDGQRRRSGEPYVTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGI 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + FG VA+LV+GVSKL+Q+ EN + +A+ M +AMA D R +L
Sbjct: 81 PKEALVEQFGETVAELVDGVSKLTQMKF---ENKAEA---QAENFQKMAMAMARDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TLDA+P K +R AKETLEI+ P+ANRLG+ + +V+ E+L FK ++P +
Sbjct: 135 VKLADRLHNMRTLDAMPYEKSRRIAKETLEIYAPIANRLGMHSMRVEFEDLGFKAMHPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIEK-----LEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ + + + + IE+ LE+ D ++ GR K LYSI+ KM
Sbjct: 195 SARIRQAVRRARGNRKEIVTKIEQSLVACLEREGLDGDVK-----GREKHLYSIYKKMRG 249
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K+ +EI D+Y R++V+ + CY+ L VH L+ +PG+ KDYI PK NGY
Sbjct: 250 KRKAFNEIMDVYAFRIVVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKANGY 303
>gi|337741395|ref|YP_004633123.1| GTP pyrophosphokinase RelA [Oligotropha carboxidovorans OM5]
gi|386030411|ref|YP_005951186.1| GTP pyrophosphokinase RelA [Oligotropha carboxidovorans OM4]
gi|336095479|gb|AEI03305.1| GTP pyrophosphokinase RelA [Oligotropha carboxidovorans OM4]
gi|336099059|gb|AEI06882.1| GTP pyrophosphokinase RelA [Oligotropha carboxidovorans OM5]
Length = 720
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 20 EDLLNRAYVYAMKAHGEQKRASGDPYFSHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I + FG + LVEG++KL +L ++RE +A+ L + LA++ D R +
Sbjct: 80 STRAEIDQLFGTKIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAISSDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+ D
Sbjct: 134 LVKLADRLHNMRTMEFMPPASRKRIAEETLDIYAPLAARMGMQEMREELEDLSFRVLDSD 193
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
H ++ +L D ++ +L +L+ I LV GR K YSI KM +K +
Sbjct: 194 AHEVVTQRLDALTDLNRNLIGEIETQLFASLEKHGIKALV-KGRRKQPYSIWTKMERKSV 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ D++G R+IVE E+CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 253 NFEQLSDVFGFRIIVETPEECYRALGVVHTCWPVVPGRFKDYISTPKQNDY 303
>gi|125559150|gb|EAZ04686.1| hypothetical protein OsI_26844 [Oryza sativa Indica Group]
Length = 296
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 139/183 (75%)
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLAD 354
I G A VS LS LSKLAR N+TAS+ EAD+L T+FLAM DARAVLIKLAD
Sbjct: 35 ILHAHACGEAMASAKVSNLSHLSKLARRNDTASRVDEADKLRTVFLAMEDARAVLIKLAD 94
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHNM TLD+LP K+Q FAKETLEIF PLAN+LGI WK QLENLCFK+L P+ + ELS
Sbjct: 95 RLHNMRTLDSLPKVKQQCFAKETLEIFAPLANQLGILNWKEQLENLCFKYLYPELYEELS 154
Query: 415 SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 474
S L++ +++ M+ +AI +LEQAL+ + + + + GR+KS+YSI+ KM +KKL MDEI+DI
Sbjct: 155 SNLLKFYNQDMIAAAIRRLEQALQVRGLCYHTISGRNKSMYSIYSKMARKKLDMDEIYDI 214
Query: 475 YGL 477
+G+
Sbjct: 215 HGM 217
>gi|383454940|ref|YP_005368929.1| GTP pyrophosphokinase [Corallococcus coralloides DSM 2259]
gi|380734107|gb|AFE10109.1| GTP pyrophosphokinase [Corallococcus coralloides DSM 2259]
Length = 739
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 175/290 (60%), Gaps = 7/290 (2%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +LA + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLIHPLEVAGILAELKLDEASIVTGLLHDTIEDTLA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG VA LV+GV+KLS+ S A + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGPEVAQLVDGVTKLSKFSASA---TLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + K+ R +ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 138 VKLADRTHNMRTLDHMSEEKQARIGQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 197
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
L +L + EA + + + L+++ + V GR K +YSI K+ + +
Sbjct: 198 FFALEEQLNKRKKEREAYIEDTCDLMRAKLQERGLKGDV-SGRFKHVYSIWKKIKSQGID 256
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+IHDI R+I + CY+AL +VHQ+W VPG+ KD+I PK N Y
Sbjct: 257 FDQIHDIIAFRIIAPSVPSCYEALGMVHQMWKPVPGRFKDFIAIPKPNMY 306
>gi|311069245|ref|YP_003974168.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|419820104|ref|ZP_14343718.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
gi|310869762|gb|ADP33237.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|388475754|gb|EIM12463.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
Length = 734
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 177/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E V +++++ +++ NIS GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYVEEVVDEVKNRVEEVNIS-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVGSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|299135106|ref|ZP_07028297.1| (p)ppGpp synthetase I, SpoT/RelA [Afipia sp. 1NLS2]
gi|298590083|gb|EFI50287.1| (p)ppGpp synthetase I, SpoT/RelA [Afipia sp. 1NLS2]
Length = 755
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 177/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 53 EDLLNRAYVYAMKAHGEQKRASGDPYFSHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 112
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I + FG + LVEG++KL +L ++RE +A+ L + LA++ D R +
Sbjct: 113 STRAEIDQLFGTEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAISNDVRVL 166
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ +P RQR A+ETL+I+ PLA R+G+ + +LE+L FK L+P+
Sbjct: 167 LVKLADRLHNMRTMEFMPPASRQRIAEETLDIYAPLAGRMGMQEMREELEDLSFKVLDPE 226
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L + + ++ +L +L+ + V+ GR K +SI KM +K +
Sbjct: 227 ARAVVTQRLDALTELNRNLIGEIETQLSASLESHGLK-AVVKGRRKQPFSIWVKMERKSV 285
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+I+E E+CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 286 NFEQLSDIFGFRVILETPEECYRALGVVHTTWPVVPGRFKDYISTPKQNDY 336
>gi|422502180|ref|ZP_16578425.1| GTP diphosphokinase [Propionibacterium acnes HL027PA2]
gi|315084168|gb|EFT56144.1| GTP diphosphokinase [Propionibacterium acnes HL027PA2]
Length = 774
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 172/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ GLR++V+ DCY AL V+H W +PG+ K YI PK+N Y
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKYYIAMPKYNMY 350
>gi|314933798|ref|ZP_07841163.1| GTP diphosphokinase [Staphylococcus caprae C87]
gi|313653948|gb|EFS17705.1| GTP diphosphokinase [Staphylococcus caprae C87]
Length = 734
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 31 EYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 90
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 91 TFEDVKDMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 144
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 145 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 204
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA + +AI K+E ++ N+S + GR K +YSI+ KM+K+K
Sbjct: 205 YFRIVNLMKKKRSEREAYIDNAINKIEAEMEKMNLSGEI-NGRPKHIYSIYRKMMKQKKQ 263
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 264 FDQIFDLLAIRIIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNMY 313
>gi|146341381|ref|YP_001206429.1| GTP pyrophosphokinase [Bradyrhizobium sp. ORS 278]
gi|146194187|emb|CAL78208.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 278]
Length = 763
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 174/291 (59%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 55 EDLLNRAYVYAMKAHGSQTRASGDPYFTHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 114
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I R FG + LVEG++KL +L ++RE +A+ L + LA+AD R +
Sbjct: 115 ATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 168
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P
Sbjct: 169 LVKLADRLHNMRTLDFVPEASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPQ 228
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + +L D ++ +L + +D ++ V GR K +SI KM +K +
Sbjct: 229 AYGVVMQRLDALADRNRNLIGEIESQLARKFRDHGLTARVF-GRRKRPFSIWTKMERKSI 287
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+I+ + E CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 288 GFEQLSDIFGFRVIMPDLESCYRALGIVHTTWPVVPGRFKDYISTPKQNDY 338
>gi|6647734|sp|O52177.1|RELA_MYXXA RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2736190|gb|AAB97677.1| (p)ppGpp synthetase [Myxococcus xanthus]
Length = 757
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 176/290 (60%), Gaps = 7/290 (2%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 39 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 98
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 99 TEEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 155
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 156 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 215
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
L +KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 216 FFALQAKLNKRKKEREKYIEDTCDLIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 274
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N Y
Sbjct: 275 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMY 324
>gi|227821398|ref|YP_002825368.1| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Sinorhizobium fredii NGR234]
gi|227340397|gb|ACP24615.1| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Sinorhizobium fredii NGR234]
Length = 741
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 177/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRQEIDELFGEDIGALVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET++I+ PLA R+G+ + +LENL F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSAEKRARISEETMDIYAPLAGRMGMQDMREELENLAFRHINPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E ++ E+L + L+ + + + GR K YS+ KM K L
Sbjct: 194 AYETVTRRLEELSQRNEGLIKKIEEELSELLRAEGLKNAQVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D++G R+IV++ CY+AL +VH W VPG+ KDY++ PK N Y
Sbjct: 254 SFEQLSDVWGFRIIVDDIPSCYRALGIVHTRWRVVPGRFKDYVSTPKQNDY 304
>gi|386358955|ref|YP_006057201.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365809462|gb|AEW97678.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 776
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 175/289 (60%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 62 RAFQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 121
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 122 LRRDFGEQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 173
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 174 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 233
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 234 VRLVAERAPKRDEYLAVVT---DQVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 289
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN Y
Sbjct: 290 AEIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMY 338
>gi|83590516|ref|YP_430525.1| (p)ppGpp synthetase SpoT/RelA [Moorella thermoacetica ATCC 39073]
gi|83573430|gb|ABC19982.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Moorella
thermoacetica ATCC 39073]
Length = 717
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 180/312 (57%), Gaps = 17/312 (5%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
LE + + +A LK V A+ A AHRGQ R SG+ Y+ H ++ A +LA
Sbjct: 5 ELEQQIRNYQPDADLK-------LVRDAYTLAATAHRGQKRRSGEDYITHPLQVAAILAE 57
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
+ + +AA LLHD ++D +S D I FG VA LV+GV+KLS+L +E
Sbjct: 58 LQLDVVTIAAALLHDVVEDTPVSLDTIKELFGEEVALLVDGVTKLSRLEYKTKEEQ---- 113
Query: 329 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ L MFL MA D R +LIKLADRLHNM TL P K+Q A+ETLEIF PLA+R
Sbjct: 114 --QAETLRKMFLTMAQDIRVILIKLADRLHNMRTLKYHPPEKQQEIARETLEIFAPLAHR 171
Query: 388 LGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
LGI K +LE+ ++L P+++ EL S + E + ++ L Q L + I
Sbjct: 172 LGIFRLKWELEDQSLRYLEPERYYELVNSINMKRREREEYIRQVVDILRQKLDEAGIKAD 231
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
+ GR K YSI+ KM+K+ + EI+D+ +R+IV+ ++CY L VVH +W +PG+
Sbjct: 232 I-QGRPKHFYSIYNKMVKQGKELSEIYDLIAVRVIVDTVKECYAVLGVVHAIWKPIPGRF 290
Query: 506 KDYITRPKFNGY 517
KDY+ PK N Y
Sbjct: 291 KDYVAMPKPNMY 302
>gi|363894837|ref|ZP_09321896.1| hypothetical protein HMPREF9629_02165 [Eubacteriaceae bacterium
ACC19a]
gi|361961297|gb|EHL14508.1| hypothetical protein HMPREF9629_02165 [Eubacteriaceae bacterium
ACC19a]
Length = 733
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 181/291 (62%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +I+A+ AE+ H GQ+R SG+ Y++H +E A +LA + + +AAGL+HD ++D
Sbjct: 19 DILIRAYEYAEKKHDGQVRRSGEKYIMHPIEVAGILAELELDVATIAAGLMHDVVEDTDT 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FGA +A LV+GV+KL ++ ++E N + + L MF+AMA D R VL
Sbjct: 79 TNEQMINMFGAEIATLVDGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K + +KET+EIF P+A RLGIS K ++E++ ++L PD
Sbjct: 133 IKLADRLHNMRTLKFMTPRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPDF 192
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ K+ + + + I KL++ ++ + NI + GR K++YSI+ KM K
Sbjct: 193 YFDMERKISRRITQRDSYINGIISKLKEKIQVEANIPCEIY-GREKNMYSIYKKMKFKNK 251
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D +R++V+ +DCY + +VH +W +P + KDYI PK N Y
Sbjct: 252 SFEEIYDFIAVRVVVKELKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMY 302
>gi|226356444|ref|YP_002786184.1| GTP diphosphokinase [Deinococcus deserti VCD115]
gi|226318434|gb|ACO46430.1| putative GTP diphosphokinase (ppGpp synthetase I) (RelA/SpoT) (GTP
pyrophosphokinase) [Deinococcus deserti VCD115]
Length = 760
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 189/321 (58%), Gaps = 34/321 (10%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-F 289
D + A+ A AH G R SG+PY+ H V A++LA +G ++ V AGLLHDT++D
Sbjct: 17 DRIELAYEFARDAHEGVNRKSGEPYITHPVAVAVILARLGMDTESVMAGLLHDTVEDVEG 76
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT---VEADRLHTMFLAM-ADA 345
++++ I FG V +VEG +K+S+LSK + + T ++A+ L M +AM AD
Sbjct: 77 VTFESIEELFGPDVRRIVEGETKVSKLSKQGSQQAEVAHTGRDMQAENLRQMLIAMTADI 136
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R +++KLADRLHNM TL ++ K+QR A+ET+EIF PLA+RLGI K +LE+L F++L
Sbjct: 137 RIIVVKLADRLHNMRTLGSMKPEKQQRIARETMEIFAPLAHRLGIGKIKWELEDLSFQYL 196
Query: 406 NPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIH 458
PD + L S+L +E A++ A+++L +AL+D + + + + GR K L+SIH
Sbjct: 197 QPDDYAYLQSRLRTRQEERDALIQGAVKQLREALEDDLELPEWVGEIDIAGRSKHLWSIH 256
Query: 459 CKMLKKKLTMDEIHDIYGLR-------LIVENEED---------------CYQALRVVHQ 496
KM ++ +++I D+ +R LIV D CY + +VH
Sbjct: 257 TKMKREGKALEQIFDLLAIRVILTPKDLIVPPGTDEKRRERAEETREKRICYHTVSIVHS 316
Query: 497 LWAEVPGKMKDYITRPKFNGY 517
+W +PG+ KDYI PK NGY
Sbjct: 317 MWTPLPGRFKDYIAVPKPNGY 337
>gi|254252971|ref|ZP_04946289.1| Guanosine polyphosphate pyrophosphohydrolase [Burkholderia dolosa
AUO158]
gi|124895580|gb|EAY69460.1| Guanosine polyphosphate pyrophosphohydrolase [Burkholderia dolosa
AUO158]
Length = 788
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 175/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K ++ +E ++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVIGKILEAAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFS 306
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGY
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGY 354
>gi|406986311|gb|EKE06927.1| hypothetical protein ACD_18C00232G0001 [uncultured bacterium]
Length = 494
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 176/294 (59%), Gaps = 12/294 (4%)
Query: 229 REDF-VIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
+ DF +I+ Y+ A+ AH GQ R SG+PY++H + A +LA + + ++ A LLHD +
Sbjct: 20 KADFEMIRIVYDYAKDAHEGQFRKSGEPYIVHPLAAAYILAEMSIDPVIIMATLLHDVPE 79
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 345
D + + + + FG +A LVEG++KL +L E + L MF+AMA D
Sbjct: 80 DTDKTLEDLEKNFGKEIASLVEGITKLGKLKYRGVERYI-------ENLRKMFIAMAEDV 132
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R ++IK ADR+HN+ TLDALP KR R A E+LEI+ P+ANRLG+ K QLE+L FK +
Sbjct: 133 RVMIIKFADRIHNLTTLDALPPQKRYRIALESLEIYAPIANRLGMDEMKGQLEDLSFKFV 192
Query: 406 NPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
P ++ + E E I ++ L++ NIS + + GR+K LYS++ K++
Sbjct: 193 YPKEYERVKKMRDEKLQGKEKYFKHIINITQKELENSNISIISIHGRNKKLYSLYKKLID 252
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K + I+DI +R+IV+N CY L ++H +W + G++KDYI +PK NGY
Sbjct: 253 KNNELGRIYDIVAIRIIVDNVAKCYATLGILHSIWKPIKGRIKDYIAQPKPNGY 306
>gi|23099479|ref|NP_692945.1| GTP pyrophosphokinase [Oceanobacillus iheyensis HTE831]
gi|22777708|dbj|BAC13980.1| GTP pyrophosphokinase (stringent response) [Oceanobacillus
iheyensis HTE831]
Length = 734
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 179/289 (61%), Gaps = 11/289 (3%)
Query: 233 VIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+I+ YE A AH+ Q R SG+PY++H V+ A +LA + +S ++AG LHD ++D ++
Sbjct: 27 LIEQAYEFASDAHKDQFRKSGEPYIIHPVQVAGILADLQMDSETISAGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + F +A LV+GV+KL ++ +E +A+ MF+AMA D R ++I
Sbjct: 87 VEQLEEAFNHEIAMLVDGVTKLGKIRYETKEAQ------QAENHRKMFVAMAKDIRVIMI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLAPEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + + E+ + I++L L NI + GR K LYSI+ KM+K+K
Sbjct: 201 YRIVQLMKQKREERESYIQEVIDELALELDTVNIE-AEMSGRPKHLYSIYQKMVKQKKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++VEN +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVENIKDCYAVLGIIHTNWKPMPGRFKDYIAMPKQNLY 308
>gi|407010993|gb|EKE25735.1| hypothetical protein ACD_5C00050G0005 [uncultured bacterium]
Length = 498
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 182/289 (62%), Gaps = 9/289 (3%)
Query: 233 VIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
VIK YE A++AH GQ R SG+ Y+ H + A +LA IG +AA LLHDT +D ++
Sbjct: 25 VIKKAYEFAKKAHEGQKRRSGEDYIQHPLAAAKILAEIGMGGKTIAASLLHDTAEDTEVT 84
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I +TFG +A +V+GV+KL ++ KL + + + L MF+AMA D R ++I
Sbjct: 85 IEEIEKTFGKEIAAMVDGVTKLGKI-KL----RGSHEEYFLENLRKMFIAMATDIRVIII 139
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ P K+ R A+ET+E+F P+ANRLG+ K QL++L F++L+P +
Sbjct: 140 KLADRLHNMQTLEHNPPEKQIRIARETMEVFAPIANRLGMGEIKTQLQDLAFQYLDPVNY 199
Query: 411 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + E V AI +LE +K + I L + GR KS+YS++ K+ K + +
Sbjct: 200 ERVKELEEKDYKERKKFVDQAISELETEIKKEGIDVLEIHGRAKSIYSLYLKLQKHDMDI 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ ++D+ +R++V DCY+ L VVH+ + + G++KDYI+ PK NGY
Sbjct: 260 NRVYDLSAVRILVNEVADCYETLGVVHKKYRPMIGRIKDYISLPKPNGY 308
>gi|83648950|ref|YP_437385.1| guanosine polyphosphate pyrophosphohydrolase/synthetase-like
protein [Hahella chejuensis KCTC 2396]
gi|83636993|gb|ABC32960.1| Guanosine polyphosphate pyrophosphohydrolase/synthetases [Hahella
chejuensis KCTC 2396]
Length = 709
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +AFY AE+AH GQ R SG+PY+ H + A LLA + + +AA +LHD ++D +
Sbjct: 21 NVVRRAFYYAEQAHEGQYRQSGEPYITHPLAVANLLADLQLDHQCLAAAMLHDVIEDTGI 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
D + FG +A+LV+GVSKL+Q+ + +A+ M LAMA D R +L
Sbjct: 81 PKDALSSQFGESIAELVDGVSKLTQIE------FKSKAEAQAENFQKMTLAMAKDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP-- 407
+KLADRLHNM TL L KR+R A ETL+I+ P+ANRLGI T V+LE+L F+ + P
Sbjct: 135 VKLADRLHNMRTLGPLKPEKRRRIATETLDIYAPIANRLGIHTMCVELEDLGFQAMFPMR 194
Query: 408 DQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
++ + + + + ++ KLE LK++ +S + GR K L+SI+ KM K+ +
Sbjct: 195 AKYIQEAVRKLRGTHYEIIEEIKHKLEGKLKERGLSVRI-QGREKHLHSIYQKMKAKRRS 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I D+Y R+I ++ + CY+ L VVH ++ VPG+ KDYI PK NGY
Sbjct: 254 FHDIMDVYAFRIITDSVDSCYRTLGVVHGMYKPVPGRFKDYIALPKANGY 303
>gi|225568638|ref|ZP_03777663.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
15053]
gi|225162566|gb|EEG75185.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
15053]
Length = 793
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 185/288 (64%), Gaps = 13/288 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A +AH Q R SG+PY++H + A++LA + + +AAG+LHD ++D +S +
Sbjct: 81 KAYETARKAHGDQCRKSGEPYIVHPLWVAIILANLEMDKETIAAGMLHDVVEDTSVSEEE 140
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I + FG VA LV+GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLA
Sbjct: 141 IKKNFGEEVALLVDGVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLA 195
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP----DQ 409
DRLHNM TL + K++ AKET++I+ P+A RLGIS K +L++L K+ P D
Sbjct: 196 DRLHNMRTLQFMTPAKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFFDL 255
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+++S+ E E V ++++ +K+ NI V GR K +SI+ KM+ ++ T+D
Sbjct: 256 VNQINSRKTE--REEFVQQIVDEVSTHMKNANIKADV-NGRVKHFFSIYKKMVNQEKTVD 312
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 313 QIYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMY 360
>gi|34499223|ref|NP_903438.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Chromobacterium violaceum ATCC 12472]
gi|34105074|gb|AAQ61430.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Chromobacterium
violaceum ATCC 12472]
Length = 718
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 183/311 (58%), Gaps = 10/311 (3%)
Query: 210 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 269
+E+ A FL +A K + + AF + AH GQ R SG+PY+ H + A +L
Sbjct: 15 IESEAAAFLESAARYLKPEDVEMLRLAFQVSRDAHEGQTRKSGEPYITHPLAVATMLTDW 74
Query: 270 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 329
+ +AA LLHD L+D ++ + FG VADLV+G+SKL +L +E+
Sbjct: 75 RLDVQGLAAALLHDVLEDTGVTKPTLVEKFGKIVADLVDGLSKLERLEYQTKED------ 128
Query: 330 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 388
+A+ M LAMA D R +++KLADRLHNM TLD++ KR+R A ETLEI+ P+ANR+
Sbjct: 129 AQAESFRKMVLAMARDIRVIIVKLADRLHNMRTLDSMREDKRRRIALETLEIYAPIANRI 188
Query: 389 GISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLV 446
G++ +L++L FKHL+P +++ LS + +V ++ + Q L NI
Sbjct: 189 GLNKVYRELQDLAFKHLHPHRYSVLSKAVRAARGNRREVVNKILQAVSQRLVQSNIE-AT 247
Query: 447 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 506
+ GR K+LYSI+ KM +K L+ E+ DIYG R++V + CY AL +H L+ +PGK K
Sbjct: 248 IKGREKNLYSIYKKMQEKHLSFSEVLDIYGFRVVVNDIPACYLALGALHSLYKPIPGKFK 307
Query: 507 DYITRPKFNGY 517
DYI PK NGY
Sbjct: 308 DYIAIPKGNGY 318
>gi|269836765|ref|YP_003318993.1| (p)ppGpp synthetase I SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
gi|269786028|gb|ACZ38171.1| (p)ppGpp synthetase I, SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
Length = 748
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 176/290 (60%), Gaps = 5/290 (1%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A++AH G++R SGDPY+ H + A++LA + + + A LLHD ++D S
Sbjct: 49 LVRKAYEFADQAHAGKLRRSGDPYISHPLAVAIILAEMQLDQETLCAALLHDVIEDTDTS 108
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENN-TASKTVEADRLHTMFLAMAD-ARAVL 349
+ + FG +A LV+GV+KL ++ E++ T K +A+ L MFLAM D R VL
Sbjct: 109 VEELTTIFGERIARLVDGVTKLGRIRWATEEDSVTREKERQAESLRKMFLAMVDDVRVVL 168
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ +P K+ R A+ET+EI+ PLANRLGI K +LE+L ++L+P
Sbjct: 169 IKLADRLHNMRTLEHMPRAKQLRSAQETMEIYAPLANRLGIWQLKSELEDLALRYLDPQT 228
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + L E + I L +AL + I + R K + SI KM +K +
Sbjct: 229 YFSIKRALDRRGTDRERYLQRVINDLTKALAEAGIRAEI-SAREKHITSIARKMERKGRS 287
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ G+R+IV+ ++DCY AL V+H +W +PG+ DYI PK + Y
Sbjct: 288 FDEIYDVLGVRVIVDEKKDCYGALGVIHTMWHPIPGEFDDYIATPKESMY 337
>gi|421468095|ref|ZP_15916662.1| RelA/SpoT domain protein, partial [Burkholderia multivorans ATCC
BAA-247]
gi|400232601|gb|EJO62207.1| RelA/SpoT domain protein, partial [Burkholderia multivorans ATCC
BAA-247]
Length = 417
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 183/313 (58%), Gaps = 17/313 (5%)
Query: 208 GNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 267
NL E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A
Sbjct: 56 ANLTAALAEYLGPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICA 108
Query: 268 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 327
++ + A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE
Sbjct: 109 GWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE---- 164
Query: 328 KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 386
+A+ M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+
Sbjct: 165 --AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAH 222
Query: 387 RLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISF 444
RLG++ +L+++ F + NP ++ L K ++ +E ++A+ D +
Sbjct: 223 RLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREVIGKILEAAQRAMADAKLDA 282
Query: 445 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 504
+ GR K++YSI+ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK
Sbjct: 283 EI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGK 341
Query: 505 MKDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 342 FKDYIAIPKINGY 354
>gi|421130113|ref|ZP_15590310.1| putative GTP diphosphokinase [Leptospira kirschneri str.
2008720114]
gi|410358572|gb|EKP05728.1| putative GTP diphosphokinase [Leptospira kirschneri str.
2008720114]
Length = 674
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|363889992|ref|ZP_09317340.1| hypothetical protein HMPREF9628_01782 [Eubacteriaceae bacterium
CM5]
gi|361966090|gb|EHL19031.1| hypothetical protein HMPREF9628_01782 [Eubacteriaceae bacterium
CM5]
Length = 733
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 181/291 (62%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +I+A+ AE+ H GQ+R SG+ Y++H +E A +LA + + +AAGL+HD ++D
Sbjct: 19 DILIRAYEYAEKKHDGQVRRSGEKYIMHPIEVAGILAELELDVATIAAGLMHDVVEDTDT 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FGA +A LV+GV+KL ++ ++E N + + L MF+AMA D R VL
Sbjct: 79 TNEQMINMFGAEIATLVDGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K + +KET+EIF P+A RLGIS K ++E++ ++L PD
Sbjct: 133 IKLADRLHNMRTLKFMTPRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPDF 192
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ K+ + + + I KL++ ++ + NI + GR K++YSI+ KM K
Sbjct: 193 YFDMERKISRRITQRDSYINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNK 251
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D +R++V+ +DCY + +VH +W +P + KDYI PK N Y
Sbjct: 252 SFEEIYDFIAVRVVVKELKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMY 302
>gi|456386014|gb|EMF51567.1| relA protein [Streptomyces bottropensis ATCC 25435]
Length = 849
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 174/289 (60%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 134 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQ 193
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 194 LRRDFGDSVGLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 245
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 246 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 305
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 306 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 361
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 362 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 410
>gi|319892687|ref|YP_004149562.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius HKU10-03]
gi|386319104|ref|YP_006015267.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius ED99]
gi|317162383|gb|ADV05926.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus
pseudintermedius HKU10-03]
gi|323464275|gb|ADX76428.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius ED99]
Length = 729
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 189/307 (61%), Gaps = 17/307 (5%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
AK++L Q ++V+K+++ A +AH GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKQYLDKEQY-------EYVLKSYHIAYKAHEGQFRKNGLPYIMHPIQVAGILTEMHLDG 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+ AG LHD ++D ++D + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTPYTFDDVAEMFNVEIATIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLRAMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 393 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE++ ++++ Q+ + + K EA + +AIE + + + +I+ + GR
Sbjct: 183 IKWELEDIALRYIDNVQYFRIVNLMKKKRSEREAYIENAIENIRKEMDIMDIAGDI-NGR 241
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +YSI+ KM+K+K D+I D+ +R+IV + +DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRVIVHSIKDCYAVLGLVHTLWKPMPGRFKDYIA 301
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 302 MPKQNMY 308
>gi|429200273|ref|ZP_19191983.1| GTP diphosphokinase [Streptomyces ipomoeae 91-03]
gi|428664025|gb|EKX63338.1| GTP diphosphokinase [Streptomyces ipomoeae 91-03]
Length = 737
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 175/289 (60%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 22 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQ 81
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 82 LRRDFGDSVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 133
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 134 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 193
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 194 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 249
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 250 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 298
>gi|39997334|ref|NP_953285.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|409912678|ref|YP_006891143.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
gi|39984225|gb|AAR35612.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|298506271|gb|ADI84994.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
Length = 716
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 179/291 (61%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLIRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGVLADLKLDVPTVVTGLLHDTIEDTLT 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FGA VA+LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 TREELEGMFGAEVANLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL P K++ ++ETL+I+ PLANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSISRETLDIYAPLANRLGISWIKSELEDLSFRYLEPQI 194
Query: 410 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 466
+ +L+SK+ + E S +E++ Q + K + + GR K LYSI KM + +
Sbjct: 195 YYDLASKVAKKKKER--ESYVEEVRQIIVSKLAEHDLKGDVFGRSKHLYSIWRKMQARNV 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+D+ +R++V + +CY+ L ++H W +PG+ KDYI PK N Y
Sbjct: 253 DIDQIYDLVAIRVMVNDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMY 303
>gi|317502040|ref|ZP_07960222.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
gi|316896514|gb|EFV18603.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 774
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 202/343 (58%), Gaps = 23/343 (6%)
Query: 189 SSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRE----------DFVIKAFY 238
+ A +EL N+E IV+G+ +++ QL H + + KA+
Sbjct: 9 AGTAEYEELNKNLE--IVDGHAVKAPEDYQDPEQLYHVLIERVRKYHPSADITMIEKAYR 66
Query: 239 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 298
+ AHR Q+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D +
Sbjct: 67 IGKEAHRDQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGE 126
Query: 299 FGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRL 356
FG VA LV+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRL
Sbjct: 127 FGEEVALLVDGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRL 180
Query: 357 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 416
HNM TL+ + K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L
Sbjct: 181 HNMRTLEFMTPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRD 240
Query: 417 L--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 474
L + E V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D+
Sbjct: 241 LNRRKTEREEFVQQIVAEVSKHMKNAHIEAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDL 299
Query: 475 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 300 FAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMY 342
>gi|416384945|ref|ZP_11684705.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
gi|357264961|gb|EHJ13781.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
Length = 744
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 178/291 (61%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H V A +L +G + ++AAG LHD ++D +
Sbjct: 37 DLICRAFNFAYQLHEGQTRKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVEDTDV 96
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I + FG VA LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 97 TVEDIEQRFGQEVALLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVI 149
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KL+DRLHNM TL+ L K++R A ET EIF PLANRLGI K +LE+L FK+L +
Sbjct: 150 VVKLSDRLHNMRTLEPLRPDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKYLESE 209
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ + + E E + + + L + L I L GR K LY I+CKM ++
Sbjct: 210 DYRKIQNFVSEKRIDRETRIETVKKLLSKRLDTMGIQVEELQGRPKHLYGIYCKMQRQNK 269
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY++L VVH L+ +PG+ KDYI PK N Y
Sbjct: 270 GFHEIYDLAALRIIVKTNEECYRSLAVVHDLFKPMPGRFKDYIGLPKPNLY 320
>gi|417007457|ref|ZP_11945369.1| ppGpp synthetase [Lactobacillus helveticus MTCC 5463]
gi|328467645|gb|EGF38700.1| ppGpp synthetase [Lactobacillus helveticus MTCC 5463]
Length = 746
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 173/293 (59%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + + AG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++ + ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRWISSETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|161525569|ref|YP_001580581.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia multivorans ATCC
17616]
gi|189349703|ref|YP_001945331.1| GTP pyrophosphokinase [Burkholderia multivorans ATCC 17616]
gi|221213621|ref|ZP_03586595.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Burkholderia
multivorans CGD1]
gi|421478118|ref|ZP_15925888.1| RelA/SpoT family protein [Burkholderia multivorans CF2]
gi|160342998|gb|ABX16084.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia multivorans ATCC
17616]
gi|189333725|dbj|BAG42795.1| GTP pyrophosphokinase [Burkholderia multivorans ATCC 17616]
gi|221166410|gb|EED98882.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Burkholderia
multivorans CGD1]
gi|400225265|gb|EJO55442.1| RelA/SpoT family protein [Burkholderia multivorans CF2]
Length = 788
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 183/312 (58%), Gaps = 17/312 (5%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
NL E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A
Sbjct: 57 NLTAALAEYLGPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAG 109
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
++ + A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE
Sbjct: 110 WKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE----- 164
Query: 329 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+R
Sbjct: 165 -AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHR 223
Query: 388 LGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFL 445
LG++ +L+++ F + NP ++ L K ++ +E ++A+ D +
Sbjct: 224 LGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREVIGKILEAAQRAMADAKLDAE 283
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
+ GR K++YSI+ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK
Sbjct: 284 I-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKF 342
Query: 506 KDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 343 KDYIAIPKINGY 354
>gi|262273554|ref|ZP_06051368.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Grimontia hollisae CIP 101886]
gi|262222532|gb|EEY73843.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Grimontia hollisae CIP 101886]
Length = 702
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 175/286 (61%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY++H + A +LA + + + A LLHD ++D ++ +
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYIIHPIAVARILAEMRLDHETLMAALLHDVIEDTEVTKED 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VADLV+GVSKL +L R+ +A+ M +AMA D R +LIKLA
Sbjct: 85 LQQRFGDTVADLVDGVSKLDKLKFRDRQE------AQAENFRKMIMAMAHDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL AL KR+R A+ETLEIF PLA+RLGI KV+LE L F+ L P+++ L
Sbjct: 139 DRTHNMRTLGALRPDKRRRIARETLEIFSPLAHRLGIHNIKVELEELGFEALYPNRYRVL 198
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+++ + M+ ++E L+D I+ VL GR K+LYSI+ KM K+ I
Sbjct: 199 REVVIQARGNRKEMIQKIHAEIEGRLQDAGINAKVL-GREKNLYSIYNKMKNKEQRFHTI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+Y R+IV+ + CY+ L +H L+ PG+MKDYI PK NGY
Sbjct: 258 MDLYAFRVIVDTVDTCYRVLGQMHNLYKPRPGRMKDYIAVPKANGY 303
>gi|378825349|ref|YP_005188081.1| GTP pyrophosphokinase [Sinorhizobium fredii HH103]
gi|365178401|emb|CCE95256.1| GTP pyrophosphokinase [Sinorhizobium fredii HH103]
Length = 741
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 177/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRQEIDELFGEDIGALVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET++I+ PLA R+G+ + +LENL F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSAEKRARISEETMDIYAPLAGRMGMQDMREELENLAFRHINPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E ++ E+L + L+ + + + GR K YS+ KM K L
Sbjct: 194 AYETVTRRLEELSQRNEGLIKKIEEELSELLQAEGLKNAQVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D++G R+IV++ CY+AL +VH W VPG+ KDY++ PK N Y
Sbjct: 254 SFEQLSDVWGFRIIVDDIPSCYRALGIVHTRWRVVPGRFKDYVSTPKQNDY 304
>gi|114570125|ref|YP_756805.1| (p)ppGpp synthetase I SpoT/RelA [Maricaulis maris MCS10]
gi|114340587|gb|ABI65867.1| (p)ppGpp synthetase I, SpoT/RelA [Maricaulis maris MCS10]
Length = 743
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 181/310 (58%), Gaps = 15/310 (4%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A E +A + DFV +A+ AE AHR Q R SG+PY H + AM+LA + +
Sbjct: 20 ADELIARIRRYFPKVDADFVRRAYDFAEEAHRPQRRQSGEPYFAHVAQVAMILADLRMDV 79
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
V GLLHDT++D + + + F VA LV GV+KL Q+ ++ +T +A+
Sbjct: 80 ATVCTGLLHDTVEDTPATLEDLTDAFSEEVASLVNGVTKLGQMELRSK------RTKQAE 133
Query: 334 RLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLC-KRQRFAKETLEIFVPLANRLGIS 391
L + +A++D R +++KL DRLHNM TLDA+ KR+R A ETLEI+ PLA R+GI+
Sbjct: 134 NLQKLVVAISDDVRVLIVKLCDRLHNMRTLDAISRADKRERIALETLEIYAPLARRIGIN 193
Query: 392 TWKVQLENLCFKHLNPDQHTELSSKLVECFD----EAMVTSAIEKLEQALKDKNISFLVL 447
V+LE+L F+H+N H ++++L D E V SA + +L I +
Sbjct: 194 RVCVELEDLAFEHVNASAHESINTRLKRLRDAHAEEVSVVSA--AMTDSLAKAGIEGRIF 251
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K YSI K+ +K LT +EI DIY RLIV+ +DCY+AL V+HQ W VP + +D
Sbjct: 252 -GREKRPYSIWRKLERKGLTFEEIADIYAFRLIVDTPDDCYRALGVIHQSWRCVPERFRD 310
Query: 508 YITRPKFNGY 517
+I+ PK N Y
Sbjct: 311 FISLPKPNNY 320
>gi|402837147|ref|ZP_10885675.1| GTP diphosphokinase [Eubacteriaceae bacterium OBRC8]
gi|402275627|gb|EJU24772.1| GTP diphosphokinase [Eubacteriaceae bacterium OBRC8]
Length = 733
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 180/291 (61%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +IKA+ AE H GQ+R SG+ Y++H V+ A +LA + + +AAGL+HD ++D
Sbjct: 19 DILIKAYEYAENKHEGQVRRSGEAYIVHPVQVAGILAELELDVATIAAGLMHDVVEDTDT 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG +A LV+GV+KL ++ ++E N + + L MF+AMA D R VL
Sbjct: 79 TNEQMINMFGVEIATLVDGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K + +KET+EIF P+A RLGIS K ++E++ ++L P+
Sbjct: 133 IKLADRLHNMRTLKFMPPRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPEF 192
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ K+ + + + I KL++ ++ + NI + GR K++YSI+ KM K
Sbjct: 193 YFDMERKISRRITQRDSYINGIISKLKEKIQVEANIPCEIY-GREKNMYSIYKKMKFKNK 251
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D +R++V+ +DCY + +VH +W +P + KDYI PK N Y
Sbjct: 252 SFEEIYDFIAVRVVVKELKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMY 302
>gi|357025772|ref|ZP_09087884.1| GTP pyrophosphokinase [Mesorhizobium amorphae CCNWGS0123]
gi|355542281|gb|EHH11445.1| GTP pyrophosphokinase [Mesorhizobium amorphae CCNWGS0123]
Length = 742
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 179/304 (58%), Gaps = 8/304 (2%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGHQKRASGDPYFSHPLEVAAILTEMHMDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + I FG + LVEG++KL +L +++ K +A+ L
Sbjct: 66 IAVALLHDTIEDTTATRAEIDELFGPEMGKLVEGLTKLKKLDLVSK------KAEQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TLD +P KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLDHVPEAKRLRIAEETMDIYAPLAGRMGMQGMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAM-VTSAIEKLEQALKDKNISFLVLCGRHKS 453
+LE + F+++NP+ + ++++L E F+ V S IEK L +K+ + R K
Sbjct: 180 EELEEIAFRYINPEAYRAVTARLAEIFERNKGVLSEIEKSLSTLFEKHAIKAGVKSRQKK 239
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
+S+ KM K L+ +++ DI+G R++V+ EDCY+AL +H W+ VPG+ KDYI+ PK
Sbjct: 240 PWSVFRKMEAKALSFEQLSDIFGFRVVVDTVEDCYRALGAIHTAWSMVPGRFKDYISTPK 299
Query: 514 FNGY 517
N Y
Sbjct: 300 QNDY 303
>gi|124024980|ref|YP_001014096.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL1A]
gi|123960048|gb|ABM74831.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL1A]
Length = 778
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E ++ AF A + H+GQ R SG+PY+ H V A LL IGA+++V+AAG LHD ++D
Sbjct: 66 EALLVAAFDLAYQLHKGQFRKSGEPYITHPVAVADLLREIGASASVIAAGFLHDVVEDTD 125
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ + + FG+ V LVEGV+KL + NN +A+ L MFLAM+ D R V
Sbjct: 126 ITPEQLEGYFGSEVRYLVEGVTKLGGIHF----NNRTE--AQAENLRKMFLAMSSDIRVV 179
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T+ L K+ R A+ET EI+ PLANRLGI K +LE+L FK L PD
Sbjct: 180 LVKLADRLHNMRTISYLGEEKQIRIARETREIYAPLANRLGIGRLKWELEDLAFKLLEPD 239
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
E+ ++ E + + ++ L+ L + + GR K LY I KM ++K
Sbjct: 240 PFREIQQQIASKRSEREERLNTTVQLLKDRLNSAGLHQCEVSGRPKHLYGIWSKMQRQKK 299
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ LR+IV + E CY+AL VVH + +PG+ KDYI PK NGY
Sbjct: 300 EFHEIFDVAALRIIVLDVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGY 350
>gi|359450272|ref|ZP_09239731.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20480]
gi|358043918|dbj|GAA75980.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20480]
Length = 701
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V K++ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKSYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I+ V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQTEVEARLEESGIAATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|221201205|ref|ZP_03574245.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Burkholderia
multivorans CGD2M]
gi|221206341|ref|ZP_03579354.1| RelA/SpoT family protein [Burkholderia multivorans CGD2]
gi|221173650|gb|EEE06084.1| RelA/SpoT family protein [Burkholderia multivorans CGD2]
gi|221179055|gb|EEE11462.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Burkholderia
multivorans CGD2M]
Length = 788
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 183/312 (58%), Gaps = 17/312 (5%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
NL E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A
Sbjct: 57 NLTAALAEYLGPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAG 109
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
++ + A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE
Sbjct: 110 WKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE----- 164
Query: 329 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+R
Sbjct: 165 -AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHR 223
Query: 388 LGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFL 445
LG++ +L+++ F + NP ++ L K ++ +E ++A+ D +
Sbjct: 224 LGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREVIGKILEAAQRAMADAKLDAE 283
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
+ GR K++YSI+ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK
Sbjct: 284 I-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKF 342
Query: 506 KDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 343 KDYIAIPKINGY 354
>gi|119472964|ref|ZP_01614820.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Alteromonadales
bacterium TW-7]
gi|119444633|gb|EAW25943.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Alteromonadales
bacterium TW-7]
Length = 701
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V K++ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKSYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I+ V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQTEVEARLEESGIAATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|392540172|ref|ZP_10287309.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
marina mano4]
Length = 701
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V K++ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKSYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I+ V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQTEVEARLEESGIAATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|67921546|ref|ZP_00515064.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
gi|67856658|gb|EAM51899.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
Length = 744
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 178/291 (61%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H GQ R SG+PY+ H V A +L +G + ++AAG LHD ++D +
Sbjct: 37 DLICRAFNFAYQLHEGQTRKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVEDTDV 96
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + I + FG VA LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 97 TVEDIEQRFGQEVALLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVI 149
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KL+DRLHNM TL+ L K++R A ET EIF PLANRLGI K +LE+L FK+L +
Sbjct: 150 VVKLSDRLHNMRTLEPLRPDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKYLESE 209
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ + + E E + + + L + L I L GR K LY I+CKM ++
Sbjct: 210 DYRKIQNFVSEKRIDRETRIETVKKLLSKRLDTMGIQVEELQGRPKHLYGIYCKMQRQNK 269
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY++L VVH L+ +PG+ KDYI PK N Y
Sbjct: 270 GFHEIYDLAALRIIVKTNEECYRSLAVVHDLFKPMPGRFKDYIGLPKPNLY 320
>gi|331090444|ref|ZP_08339325.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336440256|ref|ZP_08619849.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
1_1_57FAA]
gi|330401191|gb|EGG80784.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336013722|gb|EGN43596.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 767
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 202/343 (58%), Gaps = 23/343 (6%)
Query: 189 SSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRE----------DFVIKAFY 238
+ A +EL N+E IV+G+ +++ QL H + + KA+
Sbjct: 2 AGTAEYEELNKNLE--IVDGHAVKAPEDYQDPEQLYHVLIERVRKYHPSADITMIEKAYR 59
Query: 239 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 298
+ AHR Q+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D +
Sbjct: 60 IGKEAHRDQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGE 119
Query: 299 FGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRL 356
FG VA LV+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRL
Sbjct: 120 FGEEVALLVDGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRL 173
Query: 357 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 416
HNM TL+ + K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L
Sbjct: 174 HNMRTLEFMTPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRD 233
Query: 417 L--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 474
L + E V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D+
Sbjct: 234 LNRRKTEREEFVQQIVAEVSKHMKNAHIEAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDL 292
Query: 475 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 293 FAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMY 335
>gi|119493798|ref|ZP_01624366.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
sp. PCC 8106]
gi|119452440|gb|EAW33628.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
sp. PCC 8106]
Length = 755
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 175/291 (60%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +AF A + H GQ R SG+PY+ H + A LL +G+ TV+AAG LHD ++D +
Sbjct: 42 EIVCRAFEFAYKLHEGQYRKSGEPYINHPIAVAGLLRYLGSEGTVIAAGFLHDIIEDTEV 101
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ D + FG+ V LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 102 TPDELESHFGSEVRQLVEGVTKLSKF-------NFSNKTERQAENFRRMFLAMAKDIRVI 154
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL+ LP KR+ A ET EIF PLA+RLGI +K +LE+L FK+L P+
Sbjct: 155 VVKLADRLHNMRTLEFLPDHKRRSIALETREIFAPLAHRLGIGRFKWELEDLSFKYLEPE 214
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ E+ S + + E + + L L+ I + GR K L+ I+ KM +
Sbjct: 215 AYREIQSLVADKRNIREEKLAEVADFLRTRLEKAGIKSYEVNGRPKHLHGIYRKMHNHQK 274
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IVE E+CY+ L +VH + +PG+ KDYI PK N Y
Sbjct: 275 QFHEIYDLAALRVIVETNEECYRTLAIVHDAFRPIPGRFKDYIGLPKPNRY 325
>gi|45656898|ref|YP_000984.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|421087294|ref|ZP_15548135.1| putative GTP diphosphokinase [Leptospira santarosai str. HAI1594]
gi|421102246|ref|ZP_15562852.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600135|gb|AAS69621.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
gi|410367953|gb|EKP23335.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430403|gb|EKP74773.1| putative GTP diphosphokinase [Leptospira santarosai str. HAI1594]
Length = 674
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|433776113|ref|YP_007306580.1| (p)ppGpp synthetase, RelA/SpoT family [Mesorhizobium australicum
WSM2073]
gi|433668128|gb|AGB47204.1| (p)ppGpp synthetase, RelA/SpoT family [Mesorhizobium australicum
WSM2073]
Length = 742
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 180/304 (59%), Gaps = 8/304 (2%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGHQKRASGDPYFSHPLEVAAILTEMHMDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + I FG + LVEG++KL +L +++ K +A+ L
Sbjct: 66 IAVALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKKLDLVSK------KAEQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TLD +P KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLDHMPEAKRLRIAEETMDIYAPLAGRMGMQGMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAM-VTSAIEKLEQALKDKNISFLVLCGRHKS 453
+LE + F+ +NP+ + ++++L E F+ V + IEK AL +K+ + R K
Sbjct: 180 EELEEIAFRFINPEAYRAVTARLAEIFERNKGVLTDIEKALSALFEKHAINAGVKSRQKK 239
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
+S+ KM K L+ +++ DI+G R++V++ EDCY+AL +H W+ VPG+ KDYI+ PK
Sbjct: 240 PWSVFRKMEAKALSFEQLSDIFGFRVVVDSVEDCYRALGAIHTTWSMVPGRFKDYISTPK 299
Query: 514 FNGY 517
N Y
Sbjct: 300 QNDY 303
>gi|427731593|ref|YP_007077830.1| RelA/SpoT family (p)ppGpp synthetase [Nostoc sp. PCC 7524]
gi|427367512|gb|AFY50233.1| (p)ppGpp synthetase, RelA/SpoT family [Nostoc sp. PCC 7524]
Length = 797
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 176/290 (60%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H+GQ R SG+ Y+ H V A LL +G + ++AAG LHD ++D ++
Sbjct: 89 LICRAFEFAYQLHKGQYRKSGELYISHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 148
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I + FG V LVEGV+KLS++ N SKT +A+ MFLAMA D R ++
Sbjct: 149 IEEIEQHFGPEVRQLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIV 201
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 202 VKLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEA 261
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
++ + E E + A L++ L+ I L + GR K LYSI+ KM +++
Sbjct: 262 FRQIQQHVSEKRTAREEKLVKATTILQERLQQAGIRCLDISGRPKHLYSIYQKMQRQQKE 321
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 322 FHEIYDLAALRIIVQGNEECYRALAIVHDAFRPIPGRFKDYIGLPKPNRY 371
>gi|399543598|ref|YP_006556906.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Marinobacter sp. BSs20148]
gi|399158930|gb|AFP29493.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Marinobacter sp. BSs20148]
Length = 707
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 175/297 (58%), Gaps = 20/297 (6%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + V +A+Y AE+AH GQMR SGD Y+ H + A +LA + + + A +LHD ++D
Sbjct: 14 RINQVRRAYYFAEQAHEGQMRKSGDRYISHPLAVARILAEMRLDHQSLMAAMLHDVIEDT 73
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+ D + FG VA+LV+GVSKL+Q+ R +A+ M LAMA D R
Sbjct: 74 GIPKDALADQFGEDVAELVDGVSKLTQIEFRTRAE------AQAENFQKMTLAMARDIRV 127
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM TL +P KR+R A ETL+I+ P+ANRLG+ + +LE+L F + P
Sbjct: 128 ILVKLADRLHNMRTLGPMPYEKRKRIATETLDIYAPIANRLGMHSISTELEDLGFSTMYP 187
Query: 408 DQH-------TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCK 460
+ T+L E DE +L + L+++ + +L GR K L SI+ K
Sbjct: 188 MRSKFISKAVTKLRGSHREIIDEIR-----GRLHEKLEERGMPGRIL-GREKHLNSIYNK 241
Query: 461 MLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
M K+ + EI D+Y R+I +NE+DCY+ L VH L+ +PG+ KDYI PK NGY
Sbjct: 242 MKFKQKSFREIMDVYAFRIITDNEDDCYRILGAVHSLYKPMPGRFKDYIAMPKVNGY 298
>gi|377820111|ref|YP_004976482.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. YI23]
gi|357934946|gb|AET88505.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Burkholderia sp. YI23]
Length = 786
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 73 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQSIMAALLHDVIEDQGVTK 132
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 133 TEIAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 186
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP+++
Sbjct: 187 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPNRYA 246
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++ + D I+ V GR K++YSI+ KM K+L+
Sbjct: 247 TLEKAVKAARGNRREVVGKILEAVQRTIADAKINAEV-TGREKTIYSIYKKMRDKQLSFS 305
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 306 QVLDVYGFRVVVESALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 353
>gi|359456480|ref|ZP_09245629.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20495]
gi|358046468|dbj|GAA81878.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20495]
Length = 701
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 173/290 (59%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V K++ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKSYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQNEIEARLEESGIKATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHSLYKPIETRFKDYIAVPKTNGY 303
>gi|294828236|ref|NP_713265.2| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. 56601]
gi|417760220|ref|ZP_12408246.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000624]
gi|417765432|ref|ZP_12413394.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|417768721|ref|ZP_12416648.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Pomona]
gi|417776288|ref|ZP_12424129.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000621]
gi|417785522|ref|ZP_12433226.1| putative GTP diphosphokinase [Leptospira interrogans str. C10069]
gi|418666430|ref|ZP_13227853.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418675521|ref|ZP_13236812.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000623]
gi|418682526|ref|ZP_13243741.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|418693250|ref|ZP_13254313.1| putative GTP diphosphokinase [Leptospira interrogans str. FPW2026]
gi|418705583|ref|ZP_13266447.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418709158|ref|ZP_13269952.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418717424|ref|ZP_13277086.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 08452]
gi|418723737|ref|ZP_13282571.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12621]
gi|418731431|ref|ZP_13289830.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12758]
gi|421116511|ref|ZP_15576896.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421119978|ref|ZP_15580292.1| putative GTP diphosphokinase [Leptospira interrogans str. Brem 329]
gi|421125931|ref|ZP_15586175.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135462|ref|ZP_15595584.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|293386086|gb|AAN50283.2| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. 56601]
gi|400325689|gb|EJO77963.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400352369|gb|EJP04565.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400356908|gb|EJP13066.1| putative GTP diphosphokinase [Leptospira interrogans str. FPW2026]
gi|409943787|gb|EKN89378.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000624]
gi|409949367|gb|EKN99344.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Pomona]
gi|409951387|gb|EKO05902.1| putative GTP diphosphokinase [Leptospira interrogans str. C10069]
gi|409962535|gb|EKO26269.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12621]
gi|410011971|gb|EKO70077.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410020359|gb|EKO87162.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410347064|gb|EKO97983.1| putative GTP diphosphokinase [Leptospira interrogans str. Brem 329]
gi|410436583|gb|EKP85695.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410573896|gb|EKQ36937.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000621]
gi|410577683|gb|EKQ45553.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000623]
gi|410757794|gb|EKR19401.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410764849|gb|EKR35552.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410770494|gb|EKR45713.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410773963|gb|EKR53984.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12758]
gi|410787021|gb|EKR80756.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 08452]
gi|455665880|gb|EMF31366.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Fox 32256]
gi|455791273|gb|EMF43089.1| putative GTP diphosphokinase [Leptospira interrogans serovar Lora
str. TE 1992]
gi|456825939|gb|EMF74313.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 674
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|413963295|ref|ZP_11402522.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. SJ98]
gi|413929127|gb|EKS68415.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. SJ98]
Length = 798
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 175/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 84 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQSIMAALLHDVIEDQGVTK 143
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 144 TEIAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 197
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP+++
Sbjct: 198 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPNRYA 257
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++ + D I+ V GR K++YSI+ KM K+L+
Sbjct: 258 TLEKAVKAARGNRREVVGKILEAVQRTIADAKINAEV-TGREKTIYSIYKKMRDKQLSFS 316
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 317 QVLDVYGFRVVVEGALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 364
>gi|363892830|ref|ZP_09319981.1| RelA/SpoT family protein [Eubacteriaceae bacterium CM2]
gi|361962457|gb|EHL15582.1| RelA/SpoT family protein [Eubacteriaceae bacterium CM2]
Length = 733
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 180/291 (61%), Gaps = 11/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +IKA+ AE H GQ+R SG+ Y++H V+ A +LA + + +AAGL+HD ++D
Sbjct: 19 DILIKAYEYAENKHEGQVRRSGEAYIVHPVQVAGILAELELDVATIAAGLMHDVVEDTDT 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG +A LV+GV+KL ++ ++E N + + L MF+AMA D R VL
Sbjct: 79 TNEQMINMFGVEIATLVDGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K + +KET+EIF P+A RLGIS K ++E++ ++L P+
Sbjct: 133 IKLADRLHNMRTLKFMPPRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPEF 192
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ K+ + + + I KL++ ++ + NI + GR K++YSI+ KM K
Sbjct: 193 YFDMERKISRRITQRDSYINGIISKLKEKIQVEANIPCEIY-GREKNMYSIYKKMKFKNK 251
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D +R++V+ +DCY + +VH +W +P + KDYI PK N Y
Sbjct: 252 SFEEIYDFIAVRVVVKELKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMY 302
>gi|398338439|ref|ZP_10523142.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
kirschneri serovar Bim str. 1051]
gi|418676031|ref|ZP_13237317.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418688085|ref|ZP_13249242.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418695002|ref|ZP_13256028.1| putative GTP diphosphokinase [Leptospira kirschneri str. H1]
gi|418739479|ref|ZP_13295863.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421089191|ref|ZP_15550005.1| putative GTP diphosphokinase [Leptospira kirschneri str. 200802841]
gi|421106960|ref|ZP_15567521.1| putative GTP diphosphokinase [Leptospira kirschneri str. H2]
gi|400323796|gb|EJO71644.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|409957161|gb|EKO16076.1| putative GTP diphosphokinase [Leptospira kirschneri str. H1]
gi|410002142|gb|EKO52665.1| putative GTP diphosphokinase [Leptospira kirschneri str. 200802841]
gi|410007974|gb|EKO61652.1| putative GTP diphosphokinase [Leptospira kirschneri str. H2]
gi|410737509|gb|EKQ82250.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410753279|gb|EKR10248.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 674
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|398350680|ref|YP_006396144.1| GTP pyrophosphokinase Rsh [Sinorhizobium fredii USDA 257]
gi|390126006|gb|AFL49387.1| GTP pyrophosphokinase Rsh [Sinorhizobium fredii USDA 257]
Length = 741
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 177/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRQEIDELFGEDIGALVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET++I+ PLA R+G+ + +LENL F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSAEKRARISEETMDIYAPLAGRMGMQDMREELENLAFRHINPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E ++ E+L + L+ + + + GR K YS+ KM K L
Sbjct: 194 AYETVTRRLEELSQRNEGLIKKIEEELSELLQAEGLRNAQVKGRQKRPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D++G R+IV++ CY+AL +VH W VPG+ KDY++ PK N Y
Sbjct: 254 SFEQLSDVWGFRIIVDDISSCYRALGIVHTRWRVVPGRFKDYVSTPKQNDY 304
>gi|299822818|ref|ZP_07054704.1| GTP diphosphokinase [Listeria grayi DSM 20601]
gi|299816347|gb|EFI83585.1| GTP diphosphokinase [Listeria grayi DSM 20601]
Length = 740
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ A AH+ Q R SG+PY++H ++ A +LA + + + VA+G LHD ++D ++
Sbjct: 29 IVEKAYTFARDAHKEQFRKSGEPYIIHPIQVAGILAELRMDPSTVASGFLHDVVEDTPVT 88
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 89 LDDLKAEFGEEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 142
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 143 KLADRLHNMRTLKHLPTQKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 202
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + D E + I+ + L++ NI + GR K +YSI+ KM ++
Sbjct: 203 YRIVHLMRQKRDERERYLQDVIDGVNDNLEELNIQADI-TGRPKHIYSIYRKMSIQQKQF 261
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 262 NEIYDLLAVRIIVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMY 310
>gi|291612869|ref|YP_003523026.1| (p)ppGpp synthetase I, SpoT/RelA [Sideroxydans lithotrophicus ES-1]
gi|291582981|gb|ADE10639.1| (p)ppGpp synthetase I, SpoT/RelA [Sideroxydans lithotrophicus ES-1]
Length = 709
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 171/278 (61%), Gaps = 10/278 (3%)
Query: 243 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 302
AH+GQ+R SG PY+ H + A +L + ++ + A LLHD +D +S + I FG
Sbjct: 35 AHQGQLRQSGAPYITHPIAVARILTPLHLDAQAITAALLHDVAEDTSISIEQIGEQFGKP 94
Query: 303 VADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 361
VA+LV+G+SKL +L +E+ +A+ M +AMA D R +LIKLADRLHNM T
Sbjct: 95 VAELVDGLSKLDKLKFETKED------AQAENFRKMLMAMARDVRVILIKLADRLHNMRT 148
Query: 362 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVE 419
LD++ K +R A+ET++I+ P+ANRLG++T +LE+L FK+L P+++ LS K+
Sbjct: 149 LDSVSKEKSERIARETMDIYAPIANRLGLNTLYQELEDLSFKYLYPNRYAVLSKALKVAR 208
Query: 420 CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 479
+V+ +E + Q L + +I + GR K LY I+ KM K L ++ DIYG R+
Sbjct: 209 GNRREVVSKILEAIRQRLDENHIKAEI-RGREKHLYGIYQKMQSKSLAFAQVLDIYGFRV 267
Query: 480 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+V++ CY AL V+H L+ PGK KDYI PK NGY
Sbjct: 268 LVDDVPSCYVALGVLHALYKPFPGKFKDYIAIPKANGY 305
>gi|443628964|ref|ZP_21113301.1| putative GTP pyrophosphokinase [Streptomyces viridochromogenes
Tue57]
gi|443337562|gb|ELS51867.1| putative GTP pyrophosphokinase [Streptomyces viridochromogenes
Tue57]
Length = 845
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 175/289 (60%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 127 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQ 186
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 187 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 238
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 239 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 298
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 299 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 354
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 355 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 403
>gi|433604288|ref|YP_007036657.1| putative GTP pyrophosphokinase [Saccharothrix espanaensis DSM
44229]
gi|407882141|emb|CCH29784.1| putative GTP pyrophosphokinase [Saccharothrix espanaensis DSM
44229]
Length = 766
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 174/286 (60%), Gaps = 14/286 (4%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S D +
Sbjct: 67 AYDVAEEKHRPQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSLDQL 126
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
FG VA LV+GV+KL ++ KL EA+ + M +AMA D R ++IKLAD
Sbjct: 127 RVDFGNEVALLVDGVTKLDKV-KLG-------AAAEAETIRKMVIAMAKDPRVLVIKLAD 178
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 179 RLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIV 238
Query: 415 SKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+LV + ++ I +L L+ I+ V GR K YSIH KM+ + D+I
Sbjct: 239 -RLVANRAPSRDTYLSGVINELSSQLEGARITAKV-EGRPKHYYSIHQKMIVRGRDFDDI 296
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
HD+ G+R+ V+ DCY A+ VVH LW +PG+ KDYI +P+F Y
Sbjct: 297 HDLVGVRIQVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVY 342
>gi|383787986|ref|YP_005472554.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
gi|381363622|dbj|BAL80451.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
Length = 682
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 179/285 (62%), Gaps = 10/285 (3%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
A+ A H GQ R SG+ Y++H + A++LA + ++ AA LLHD ++D ++ + I
Sbjct: 29 AYKFALEKHSGQTRESGEEYIIHPLNVAIILANLKLDAETYAAALLHDVIEDTNVTLEDI 88
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
FG VA LV GV+KL + ++ E + L M LAMA D R VLIKLAD
Sbjct: 89 KSQFGETVAFLVNGVTKLRGIKSVSTEE------AHLESLRKMLLAMAQDVRVVLIKLAD 142
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHNM TL+ LP +++ AKET++I+VPLA+RLGI T K +LE+L F++L P+++ EL+
Sbjct: 143 RLHNMRTLNYLPSERQKEIAKETMDIYVPLAHRLGIYTMKWELEDLSFRYLEPEKYYELA 202
Query: 415 SKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 472
K+ + + EA V +E+L LK+ IS +V GR K+LY I+ KM++ +EI+
Sbjct: 203 RKVAKKREEREAYVNELMEELRNLLKEHGISGIV-EGRPKNLYGIYRKMIRDGKQFEEIY 261
Query: 473 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DI LR+IV++ CYQ L +V+ + VPG++KDYI PK N Y
Sbjct: 262 DIIALRIIVDDIPTCYQVLGIVNNYYKLVPGRIKDYIAMPKPNFY 306
>gi|398806933|ref|ZP_10565828.1| (p)ppGpp synthetase, RelA/SpoT family [Polaromonas sp. CF318]
gi|398086767|gb|EJL77375.1| (p)ppGpp synthetase, RelA/SpoT family [Polaromonas sp. CF318]
Length = 745
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 179/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V +A+ A+ AH GQ+R SG+PY+ H + A A ++ + A LLHD ++D +
Sbjct: 38 DNVRRAYRFADEAHLGQLRNSGEPYITHPIAVAQQCAEWKLDAQALMAALLHDAIEDCGV 97
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + FGA VA+LV+G++KL +L RE N +A+ M LAMA D R +L
Sbjct: 98 TKPELIDRFGAPVAELVDGLTKLEKLEFNTREEN------QAESFRKMLLAMARDVRVIL 151
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL +P K R ++ETL+I+ P+A+RLG++T +L++L F+HL+P +
Sbjct: 152 IKLADRTHNMRTLGDVPRAKWTRISRETLDIYAPIAHRLGLNTTYRELQDLSFQHLHPWR 211
Query: 410 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L+ L + ++ ++E A + + +V+ GR K+LYSI+ KM +K L+
Sbjct: 212 YATLTKALQKARGRRRDVIKRVQGEVESAFSNAQVP-VVISGREKTLYSIYRKMDEKHLS 270
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R+IV++ CY A+ V+HQL+ +PGK KDYI PK NGY
Sbjct: 271 FAQVTDLYGFRVIVKDLTACYTAMGVLHQLYKPLPGKFKDYIAIPKINGY 320
>gi|77361702|ref|YP_341277.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
haloplanktis TAC125]
gi|76876613|emb|CAI87835.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudoalteromonas
haloplanktis TAC125]
Length = 702
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V KA+ A AH GQ R+SG+PY+ H VE + +LA++ + + A L+HD ++D
Sbjct: 21 ELVQKAYVVAREAHEGQTRSSGEPYITHPVEVSQILASMHLDHETLMAALMHDVIEDTNF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGDTVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL +L KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGSLRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L+ I V GR K +YSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQNEIEMRLEQSGIKATV-SGREKHIYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ VE+ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVESMDICYRVLGVAHNLYKPIETRFKDYIAVPKTNGY 303
>gi|310658609|ref|YP_003936330.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
gi|308825387|emb|CBH21425.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
Length = 729
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D VIKA+ A AH GQ R SG+ Y++H +E A +LA + + +AAGL+HD ++D +
Sbjct: 19 DIVIKAYNYAYNAHEGQYRKSGEKYIIHPLEVAKILAELELDVFTIAAGLMHDVVEDTEV 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S+ I R FG VA+LV+GV+KL ++ ++E +A+ L MF+AM D R +L
Sbjct: 79 SFSDIERLFGTEVAELVDGVTKLGKIEYKSKEE------TQAENLRKMFMAMGKDIRVIL 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K + A ET+EI+ P+A+RLGIS K ++E++ ++L+P+
Sbjct: 133 IKLADRLHNMRTLKYMSEEKAKEKATETIEIYAPIAHRLGISRVKWEMEDIALRYLDPEG 192
Query: 410 HTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + EA + I+ L+ L++ NI + GR K YSI+ KM + +
Sbjct: 193 YYDLIEKVSKKRREREAYIQGVIDLLKNKLEEANIEGDI-KGRAKHFYSIYRKMKYQSKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V++ +DCY + +VH +W +PG+ KDYI PK N Y
Sbjct: 252 FEEIYDLMAVRILVDSLKDCYGVVGIVHTIWKPMPGRFKDYIAMPKPNMY 301
>gi|338534399|ref|YP_004667733.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
gi|337260495|gb|AEI66655.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
Length = 740
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 175/290 (60%), Gaps = 7/290 (2%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 138 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 197
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
L KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 198 FFALQEKLNKRKKEREKYIEDTCDVIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 256
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N Y
Sbjct: 257 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMY 306
>gi|108762300|ref|YP_631405.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
gi|108466180|gb|ABF91365.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
Length = 753
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 176/290 (60%), Gaps = 7/290 (2%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 35 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 94
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 95 TEEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 151
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 152 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 211
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
L +KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 212 FFALQAKLNKRKKEREKYIEDTCDLIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 270
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N Y
Sbjct: 271 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMY 320
>gi|359431659|ref|ZP_09222083.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20652]
gi|357921697|dbj|GAA58332.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. BSi20652]
Length = 701
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 173/290 (59%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V K++ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKSYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQHEIEARLEESGIKATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHSLYKPIETRFKDYIAVPKTNGY 303
>gi|386332969|ref|YP_006029138.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum Po82]
gi|334195417|gb|AEG68602.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum Po82]
Length = 866
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 174/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V +AF+ ++ AH GQ R SG+PY+ H V A + A + + A LLHD ++D ++
Sbjct: 167 LVKEAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVT 226
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ FGA VA+LV+G++KL +L +RE +A+ M LAMA D R +L+
Sbjct: 227 KSELAEKFGAKVAELVDGLTKLDKLEFQSREQ------AQAESFRKMLLAMARDVRVILV 280
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADR HNM TLD +P KR+R A ET+EI+ P+A+RLG++T +L+ L F+ +P ++
Sbjct: 281 KLADRTHNMRTLDHVPPEKRRRIAGETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRY 340
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
L K +V+ +E ++AL D I L GR K+LYSI+ KM K+L+
Sbjct: 341 ATLEKAVKAARGNRREVVSRILEAAQRALADAGIP-AELTGREKTLYSIYRKMHDKQLSF 399
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE + CY A+ +H L+ +PGK KDYI PK NGY
Sbjct: 400 SQVLDVYGFRVVVETQMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGY 448
>gi|374993650|ref|YP_004969149.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus orientis
DSM 765]
gi|357212016|gb|AET66634.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus orientis
DSM 765]
Length = 739
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 179/305 (58%), Gaps = 10/305 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E L + K R V KA++ AE AHR Q+R SG+ Y+LH +E A +L + +
Sbjct: 5 ELLVKMKKKSPQARLAIVDKAYHFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEAT 64
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+AA LLHD ++D + I + FG +A LV+GV+KL ++ ++ + + L
Sbjct: 65 IAAALLHDVVEDTEYTIADIEKNFGEEIALLVDGVTKLGRIEYKSKVEQ------QVENL 118
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
MFLAMA D R +LIKLADRLHNM TL K++ A+ETLEIF PLANRLGI K
Sbjct: 119 RKMFLAMAKDIRVILIKLADRLHNMRTLKYHSPAKQKEIAQETLEIFAPLANRLGIFRIK 178
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+LE+L F++L P+++ +L L EA + I ++ + L + I + + GR K
Sbjct: 179 WELEDLSFRYLKPEEYYDLVEGIALKRREREAYINEVIVQMREKLDEVQI-YADIAGRPK 237
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
YSI+ KM + + EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI P
Sbjct: 238 HFYSIYRKMTTQNKELSEIYDLMAIRVIVDSVNDCYGALGIIHTMWKPIPGRFKDYIAMP 297
Query: 513 KFNGY 517
K N Y
Sbjct: 298 KPNMY 302
>gi|147677380|ref|YP_001211595.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
gi|146273477|dbj|BAF59226.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
Length = 765
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 173/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V+ A+ A AHR Q R SG+P+++H +E A +LA + + + AGLLHD ++D ++
Sbjct: 59 VVAAYEFAANAHREQKRFSGEPFIVHPLEVAKILAELELDQETLVAGLLHDVVEDTGVTL 118
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I FG A LV+G +KLS++ ++E ++A+ L MFLAMA D R +LIK
Sbjct: 119 QDIREQFGVETALLVDGTTKLSRIEYKSKEE------LQAENLRKMFLAMAKDIRVILIK 172
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHN+ TL P K+ A ETLEIF PLA+RLGI K +LE+L F+ PD++
Sbjct: 173 LADRLHNLRTLKYHPEPKQVEIANETLEIFAPLAHRLGIYRIKWELEDLSFRFKEPDRYF 232
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
EL +K+ D E + S I L L++ I + GR K YSI+ KM++++ ++
Sbjct: 233 ELVNKIASTRDKREEYIRSVISILAGKLEEVGIEAEI-QGRPKHFYSIYAKMIEQQKDLN 291
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ +R +VE DCY L +VH +W +PG+ KDYI PK N Y
Sbjct: 292 EIFDVMAVRCLVETVRDCYATLGIVHTMWTPIPGRFKDYIAMPKSNMY 339
>gi|456966424|gb|EMG08042.1| RelA/SpoT domain protein, partial [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 385
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|27262490|gb|AAN87526.1| GTP pyrophosphokinase [Heliobacillus mobilis]
Length = 734
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+FV + F A+ AH GQ+R SG+PY+ H + A +LA + + +AAGLLHD ++D +
Sbjct: 23 EFVRRDFQYADVAHTGQLRKSGEPYIYHPLAVAFILADLELDMATIAAGLLHDVVEDTPI 82
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + + FG VA LV+GV+KLS+L +++ + + L MFLAMA D R +L
Sbjct: 83 TLEELEKEFGPEVALLVDGVTKLSRLEVRSKQEQ------QVESLRKMFLAMAKDIRVIL 136
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL K++ A+ET+E+F PLANRLGIS K +LE+L ++L P+
Sbjct: 137 IKLADRLHNMRTLRHQKPEKQREIAEETIELFAPLANRLGISRIKWELEDLSLRYLEPET 196
Query: 410 HTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L ++ E + I +L + L+ + + GR K YSI+ KM +K
Sbjct: 197 YYDLVQRIATKRAEREERINDIIRELSEKLEAVGVKADI-SGRPKHFYSIYRKMTNQKKD 255
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ +R++V++ +DCY AL ++H +W +P + KDYI PK N Y
Sbjct: 256 LSEIYDLIAVRVLVDSVKDCYGALGIIHTIWKPIPMRFKDYIATPKTNMY 305
>gi|75911185|ref|YP_325481.1| (p)ppGpp synthetase I [Anabaena variabilis ATCC 29413]
gi|75704910|gb|ABA24586.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Anabaena
variabilis ATCC 29413]
Length = 751
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 174/290 (60%), Gaps = 11/290 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +AF A + H GQ R SG+ Y+ H + A LL +G + ++AAG LHD ++D ++
Sbjct: 43 LICRAFDFAYQLHHGQYRKSGELYISHPIAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 102
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 349
+ I FG V LVEGV+KLS++ N SKT +A+ MFLAMA D R ++
Sbjct: 103 IEEIEERFGPEVKQLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIV 155
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 156 VKLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKNLEPEA 215
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
++ + E D E + A L L+ I L + GR K LYSI+ KM +++
Sbjct: 216 FRQMQKYVSEKRDAREEKLAKATAILRDRLQQAGIRCLDISGRPKHLYSIYQKMHRQQKE 275
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ LR+IVE E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 276 FNEIYDLAALRIIVETNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 325
>gi|308233820|ref|ZP_07664557.1| (p)ppGpp synthetase I, SpoT/RelA [Atopobium vaginae DSM 15829]
gi|328944552|ref|ZP_08242013.1| GTP diphosphokinase [Atopobium vaginae DSM 15829]
gi|327490953|gb|EGF22731.1| GTP diphosphokinase [Atopobium vaginae DSM 15829]
Length = 796
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 175/287 (60%), Gaps = 10/287 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA-IGANSTVVAAGLLHDTLDDAFLSYD 293
+A+ A H+ QMR SG+PY+ H VE A +LA + + + A LLHDT++D + D
Sbjct: 63 EAYDFASTYHKKQMRQSGEPYINHPVEVAFILAKDLHMDEDSICAALLHDTVEDTSATLD 122
Query: 294 YIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKL 352
I FG V DLV+GV+KL+ + + + +A L MFLAM+ D R ++IKL
Sbjct: 123 DIRNLFGETVMDLVDGVTKLTSIEVSSMDEK------QALNLRKMFLAMSKDIRVIIIKL 176
Query: 353 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ--H 410
ADRLHNM TL ALP +R A+ET++++ PLA+RLGIS+ K +LE+L F +L D+ H
Sbjct: 177 ADRLHNMRTLAALPPHRRNFKARETMDVYAPLADRLGISSIKWELEDLAFLYLEHDEYEH 236
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
L + E +TS I LEQ L IS + GR K L+SI+ KML+K + ++
Sbjct: 237 VALMVQETRAQREQNITSTIHMLEQELHKVGISDFQIQGRPKHLWSIYQKMLRKDKSFND 296
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I+D+ +R++ ++ DCY AL VH +W +PG+ KDYI PK NGY
Sbjct: 297 IYDLVAIRVLTKSVGDCYLALGAVHTIWHPLPGRFKDYIAMPKPNGY 343
>gi|456989321|gb|EMG24130.1| putative GTP diphosphokinase, partial [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 493
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|456354826|dbj|BAM89271.1| GTP pyrophosphokinase [Agromonas oligotrophica S58]
Length = 767
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 175/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 57 EDLLNRAYVYAMKAHGSQTRASGDPYFTHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 116
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I R FG + LVEG++KL +L ++RE +A+ L + LA+A D R +
Sbjct: 117 ATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 170
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL+ +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P
Sbjct: 171 LVKLADRLHNMRTLEFVPEASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPQ 230
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ + +L D ++ +L + +D ++ V GR K +SI KM +K +
Sbjct: 231 AYSVVMQRLDALADRNRNLIGEIESQLARKFRDHGLTARVF-GRRKRPFSIWTKMERKSI 289
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+I+ + E CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 290 GFEQLSDIFGFRVIMPDLESCYRALGIVHTTWPVVPGRFKDYISTPKQNDY 340
>gi|260437936|ref|ZP_05791752.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
gi|292809687|gb|EFF68892.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
Length = 762
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 185/289 (64%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A++AH GQ R SG+PY++H + A++LA + + + AG+LHD ++D ++
Sbjct: 47 LIEKAYKVADKAHSGQKRKSGEPYIIHPLCVAIILAQLELDKETIIAGILHDVIEDTEVT 106
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y+ I R FG VA LV+GV+KL+QL+ E++ ++A+ L MFLAMA D R +LI
Sbjct: 107 YEDISREFGEEVALLVDGVTKLTQLN---YEHDKIE--IQAENLRKMFLAMAKDIRVILI 161
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ K+ ++ET+EI+ P+A RLGIS KV+L++L +L PD +
Sbjct: 162 KLADRLHNMRTMQYQKPEKQIEKSRETMEIYSPIAQRLGISKIKVELDDLSLMYLQPDVY 221
Query: 411 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L L + E V + ++++ L I++ + GR K +SI+ KM+ + T+
Sbjct: 222 HKLEHDLTLGKEARENFVKEIVAEVKEKLSTTGINY-TIDGRVKHFFSIYKKMVNQDKTL 280
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D++ +R+IV+ +DCY L ++H+++ +PG+ KDYI PK N Y
Sbjct: 281 DQIYDLFAVRIIVDTIKDCYAVLGLIHEMYKPIPGRFKDYIAMPKPNMY 329
>gi|110633300|ref|YP_673508.1| (p)ppGpp synthetase I SpoT/RelA [Chelativorans sp. BNC1]
gi|110284284|gb|ABG62343.1| (p)ppGpp synthetase I, SpoT/RelA [Chelativorans sp. BNC1]
Length = 745
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 181/306 (59%), Gaps = 12/306 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGHQKRASGDPYFSHPLEVAAILTDMHLDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + D I FG+ + LVEG++KL +L ++ S+ +A+ L
Sbjct: 66 IAVALLHDTIEDTSATRDEIDELFGSEIGKLVEGLTKLKKLDLVS------SRAEQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TLD +P KR R A+ET+EI+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLDHMPSHKRLRIAEETMEIYAPLAGRMGMQDMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRH 451
+LE L F+++NP+ + ++ +L + + I ++EQAL+ ++ + + R
Sbjct: 180 EELEELAFRYINPEAYHAVTERLADLTERN--RGVIGEIEQALQHLFENYKINAAVKSRQ 237
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K +S+ KM K L+ +++ DI+G R+IVE EDCY+AL +H W+ VPG+ KDYI+
Sbjct: 238 KKPWSVFRKMEAKALSFEQLSDIFGFRVIVETVEDCYRALGAIHTTWSLVPGRFKDYIST 297
Query: 512 PKFNGY 517
PK N Y
Sbjct: 298 PKQNDY 303
>gi|298491762|ref|YP_003721939.1| (p)ppGpp synthetase I ['Nostoc azollae' 0708]
gi|298233680|gb|ADI64816.1| (p)ppGpp synthetase I, SpoT/RelA ['Nostoc azollae' 0708]
Length = 758
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 172/289 (59%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ AF A + H+GQ R SG+ Y+ H V A LL +G + ++ AG LHD ++D ++
Sbjct: 43 LICHAFQFAYQLHQGQYRKSGEAYIAHPVAVAGLLRDLGGSPAMIGAGFLHDVVEDTEVT 102
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FGA V LVEGV+KLS++ N T+ +A+ MFLAMA D R +++
Sbjct: 103 IEEIEEHFGAEVRQLVEGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVV 156
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L PD
Sbjct: 157 KLADRLHNMRTLQYMSEASRRRSAQETRDIFAPLANRLGIWRVKWELEDLAFKYLEPDAF 216
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E E + A E L + ++ I L + GR K LYSI+ KM ++
Sbjct: 217 REIQQHVSEKRTAREEKLARATEVLRKRMQQAGIQCLDVSGRPKHLYSIYQKMHRQHKEF 276
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N Y
Sbjct: 277 HEIYDLAALRIIVQTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRY 325
>gi|126666527|ref|ZP_01737505.1| Guanosine polyphosphate pyrophosphohydrolase/synthetases
[Marinobacter sp. ELB17]
gi|126628915|gb|EAZ99534.1| Guanosine polyphosphate pyrophosphohydrolase/synthetases
[Marinobacter sp. ELB17]
Length = 707
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 175/297 (58%), Gaps = 20/297 (6%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + V +A+Y AE+AH GQMR SGD Y+ H + A +LA + + + A +LHD ++D
Sbjct: 14 RINQVRRAYYFAEQAHEGQMRKSGDRYISHPLAVARILAEMRLDHQSLMAAMLHDVIEDT 73
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+ D + FG VA+LV+GVSKL+Q+ R +A+ M LAMA D R
Sbjct: 74 GIPKDALADQFGEDVAELVDGVSKLTQIEFRTRAE------AQAENFQKMTLAMARDIRV 127
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM TL +P KR+R A ETL+I+ P+ANRLG+ + +LE+L F + P
Sbjct: 128 ILVKLADRLHNMRTLGPMPYEKRKRIATETLDIYAPIANRLGMHSISTELEDLGFSTMYP 187
Query: 408 DQH-------TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCK 460
+ T+L E DE +L + L+++ + +L GR K L SI+ K
Sbjct: 188 MRSKFISKAVTKLRGSHREIIDEIR-----GRLHEKLEERGMPGRIL-GREKHLNSIYNK 241
Query: 461 MLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
M K+ + EI D+Y R+I +NE+DCY+ L VH L+ +PG+ KDYI PK NGY
Sbjct: 242 MKFKQKSFHEIMDVYAFRIITDNEDDCYRILGAVHSLYKPMPGRFKDYIAMPKVNGY 298
>gi|407002062|gb|EKE18918.1| hypothetical protein ACD_9C00200G0011 [uncultured bacterium]
Length = 494
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 180/289 (62%), Gaps = 9/289 (3%)
Query: 233 VIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
VI YE A++AH GQ R SG+ Y H TA +LA +G +AAGL+HD +D +
Sbjct: 24 VISEAYEFAQQAHEGQKRRSGEEYFQHPAATAKILAQMGMGGKTIAAGLMHDVPEDTEFT 83
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I + FG +A LV+GV+KL ++ KL + + + L M LAMA D R +LI
Sbjct: 84 LEDIEKKFGKEIAHLVDGVTKLGRI-KL----RGSHEEYYLENLRKMLLAMASDIRVILI 138
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ LP K+QR A+ET+EIF P+ANRLGI K QL++L F++L+ + +
Sbjct: 139 KLADRLHNMQTLNHLPPDKQQRIAQETMEIFAPIANRLGIGEIKTQLQDLSFRYLDKENY 198
Query: 411 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + + E V AI++L++ +K + I + GR KS+YS+ K+ K + +
Sbjct: 199 SLVKELEEKDYKERSRYVQQAIDELKEEIKKEGIQIIQADGRAKSIYSLFLKLQKHDMDI 258
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ I+D+ +R+IV DCY+ L +VH+ + + G++KDYI+ PK NGY
Sbjct: 259 NRIYDLAAVRIIVPEVADCYETLGIVHKKYRPMIGRIKDYISLPKPNGY 307
>gi|367475461|ref|ZP_09474920.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 285]
gi|365272177|emb|CCD87388.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 285]
Length = 768
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 175/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 57 EDLLNRAYVYAMKAHGSQTRASGDPYFTHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 116
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I R FG + LVEG++KL +L ++RE +A+ L + LA+A D R +
Sbjct: 117 ATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 170
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL+ +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P
Sbjct: 171 LVKLADRLHNMRTLEFVPEASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPQ 230
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ + +L D ++ +L + +D ++ V GR K +SI KM +K +
Sbjct: 231 AYSVVMQRLDALADRNRNLIGEIESQLARKFRDHGLTARVF-GRRKRPFSIWTKMERKSI 289
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+I+ + E CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 290 GFEQLSDIFGFRVIMPDLESCYRALGIVHTTWPVVPGRFKDYISTPKQNDY 340
>gi|433449313|ref|ZP_20412177.1| GTP pyrophosphokinase [Weissella ceti NC36]
gi|429538827|gb|ELA06865.1| GTP pyrophosphokinase [Weissella ceti NC36]
Length = 741
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 179/289 (61%), Gaps = 11/289 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ AE H QMR SG+PY++H ++ A +LA + + V AG LHD ++D +
Sbjct: 28 VDKAYAFAENLHHDQMRQSGEPYIMHPIQVAGILADLNMDPDTVVAGYLHDVIEDTDATL 87
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLS-KLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FGA VA +V+GVSKLS++ K +RE A+ + LAM+ D R +++
Sbjct: 88 EELTELFGANVAIIVDGVSKLSKIEYKSSREQ-------LAENHRKLLLAMSKDIRVIIV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TLDAL K++R A ETLEI+ PLA+RLGI T K +LE+L ++L+PD +
Sbjct: 141 KLADRLHNMRTLDALKPEKQRRIASETLEIYAPLADRLGIMTIKWELEDLSLRYLDPDAY 200
Query: 411 TELSSKLVECFDEAM--VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+++ K+ E + V A++++E + N+ + GR K +YS++ KM+ K
Sbjct: 201 HDIAKKMKMRRQERLNFVEEAVDEIENIISSLNLEHTDVYGRPKHIYSVYRKMVDKHKDF 260
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I D+ +R++V++ + Y L ++H W +PG+ KDYI PK NGY
Sbjct: 261 EDIFDLSAIRVVVDSMPETYAVLGMIHSKWTPMPGRFKDYIALPKNNGY 309
>gi|186475437|ref|YP_001856907.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia phymatum STM815]
gi|184191896|gb|ACC69861.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia phymatum STM815]
Length = 794
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A AA ++ + A LLHD ++D ++
Sbjct: 79 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAETCAAWKLDAQSIMAALLHDVMEDQGVTK 138
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 139 TELAERFGAKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 192
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++
Sbjct: 193 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYA 252
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++A+ D + V GR K+++SI+ KM K+L+
Sbjct: 253 TLEKAVKAARGNRREVVGKILESVQRAIADAKLDAEV-TGREKTIFSIYKKMRDKQLSFS 311
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ +CY L +H L+ VPGK KDYI PK NGY
Sbjct: 312 QVLDVYGFRVVVESPLECYTCLGALHALYKPVPGKFKDYIAIPKVNGY 359
>gi|345857932|ref|ZP_08810350.1| relA/SpoT family protein [Desulfosporosinus sp. OT]
gi|344329019|gb|EGW40379.1| relA/SpoT family protein [Desulfosporosinus sp. OT]
Length = 735
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 174/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ AE AHR Q+R SG+ Y+LH +E A +L + + +AA LLHD ++D +
Sbjct: 21 IVDKAYQFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEATIAAALLHDVVEDTDFT 80
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I + FG+ +A LV+GV+KL +L ++ + + L MFLAMA D R +LI
Sbjct: 81 IVDIEKEFGSEIALLVDGVTKLGRLEYKSKMEQ------QVENLRKMFLAMAKDIRVILI 134
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL + K++ A+ETLEIF PLANRLGI K +LE+L F++L P ++
Sbjct: 135 KLADRLHNMRTLKYHSVQKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLKPQEY 194
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L L EA + I ++ + L + I + + GR K YSI+ KM + +
Sbjct: 195 YDLVEGIALKRREREAYINEVIVQMRERLNEVEI-YAEIAGRPKHFYSIYRKMTTQHKEL 253
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++VE+ DCY AL ++H +W +PG+ KDYI PK N Y
Sbjct: 254 SEIYDLMAIRVVVESVNDCYGALGIIHTMWKPIPGRFKDYIAMPKPNMY 302
>gi|404371563|ref|ZP_10976867.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
gi|226912310|gb|EEH97511.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
Length = 730
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D V KA+ A AH+ Q R SG+PY+ H ++ A +LA +G +++ + AGLLHD ++D
Sbjct: 19 DIVKKAYDLACDAHKNQKRESGEPYITHPIDVAEILAEMGMDTSTIVAGLLHDVIEDTHY 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+YD I F VADLV+GV+KL ++ +E +AD + M LAMA D R ++
Sbjct: 79 TYDDIKNIFNEEVADLVQGVTKLGKIEYKTKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHN+ TL +P K+++ AKETL+I+ PLA+RLGIS K +LE+L F++L+ ++
Sbjct: 133 IKLADRLHNLRTLKFMPKEKQKQKAKETLDIYAPLAHRLGISKIKWELEDLAFRYLHEEE 192
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L ++ E E + IE L L++ I + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVKQIAEKRVERETYIAEIIEDLHNKLEESEIDSDI-DGRPKHFYSIYKKMINKNKS 251
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMY 301
>gi|449095202|ref|YP_007427693.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
gi|449029117|gb|AGE64356.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
Length = 734
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|336324396|ref|YP_004604363.1| (p)ppGpp synthetase I SpoT/RelA [Flexistipes sinusarabici DSM 4947]
gi|336107977|gb|AEI15795.1| (p)ppGpp synthetase I, SpoT/RelA [Flexistipes sinusarabici DSM
4947]
Length = 710
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 178/286 (62%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A + +RGQ R SG+PYL H + A +LA + + V G+LHDTL+D +Y+
Sbjct: 29 KAYVYAAQKYRGQQRKSGEPYLSHPLNVAYILAEMNMDLDTVIGGILHDTLEDTDATYEE 88
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG +A +V+GVSK+ ++ +S+ +A+ M ++M+ D R ++IK A
Sbjct: 89 LAEMFGEDIAFIVDGVSKIGKIK------FKSSEEKQAENFRKMLISMSKDVRVIVIKHA 142
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+D L KR+R AKETLEI+ PLA+RLGI+ K ++E++CF+ LNP+ + ++
Sbjct: 143 DRLHNMRTIDHLDEEKRKRVAKETLEIYAPLAHRLGIAWIKWEMEDMCFRVLNPEMYYDI 202
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ KL E+ + I L+ +K++ I + GR K YSI+ KM+KKK + +EI
Sbjct: 203 YNKVKLKRSERESYLNEIISILKSHMKEEKIDAEIF-GRPKHFYSIYNKMVKKKSSFNEI 261
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ LR++V + +CY L ++H LW + G+ KDYI PK N Y
Sbjct: 262 YDLLALRILVNSVPECYAVLGLIHSLWKPIQGRFKDYIAMPKSNMY 307
>gi|337280958|ref|YP_004620430.1| GTP pyrophosphokinase [Ramlibacter tataouinensis TTB310]
gi|334732035|gb|AEG94411.1| candidate GTP pyrophosphokinase (GTP pyrophosphokinase)
[Ramlibacter tataouinensis TTB310]
Length = 753
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A+ AH GQ+RASG+PY+ H + A A ++ + A LLHD ++D ++
Sbjct: 47 VRRAYRFADEAHLGQIRASGEPYITHPIAVAAQCAEWKLDAQALMAALLHDAIEDCGVTK 106
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G++KL +L RE N +A+ M LAMA D R +LIK
Sbjct: 107 PELIERFGAPVAELVDGLTKLDKLQFNTREEN------QAESFRKMLLAMARDVRVILIK 160
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADR HNM TLD +P K R + ETLEI+ P+A+RLG++ +L+ L F+HL P ++
Sbjct: 161 LADRTHNMRTLDDVPREKWTRISSETLEIYAPIAHRLGLNQTYRELQELSFRHLKPWRYQ 220
Query: 412 ELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
LS + + ++ ++E A + I+ + L GR K+LYSI+ KM +K L+
Sbjct: 221 VLSKAVTKARSRRRDLIQKVQREVEAAFEAAGIA-IRLAGREKTLYSIYRKMDEKHLSFA 279
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ DIYG R++V + DCY AL ++HQ++ VPG+ KD+I PK NGY
Sbjct: 280 QVTDIYGFRVVVPSVIDCYTALGILHQMYKPVPGRFKDHIAIPKVNGY 327
>gi|395240870|ref|ZP_10417894.1| GTP diphosphokinase [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475652|emb|CCI87871.1| GTP diphosphokinase [Lactobacillus gigeriorum CRBIP 24.85]
Length = 748
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 176/293 (60%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV A+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 30 FVEHAYDFANKAHEGQFRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVT 89
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 90 NDDIKNIFGEDVAFIVDGVTKLNKYQY------QSHQEFLAENHRKMLIAMAKDLRVIMV 143
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ L K++R A ET++I+ PLA+RLGI + K +LE++ F +LNPD +
Sbjct: 144 KLADRLHNMHTLEHLRPDKQRRIASETMDIYAPLADRLGIGSIKWELEDISFHYLNPDAY 203
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
++V D E ++ AI +++ L I + + GR K +YSI+ KM+ K
Sbjct: 204 Y----RIVGLMDVKRSERERYISDAISVMKKTLDSLGIQYQIY-GRPKHIYSIYKKMVNK 258
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R++V+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 259 HKDFEDIYDLLAVRVLVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGY 311
>gi|114764530|ref|ZP_01443755.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Pelagibaca bermudensis HTCC2601]
gi|114543097|gb|EAU46116.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Roseovarius sp. HTCC2601]
Length = 712
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 172/289 (59%), Gaps = 11/289 (3%)
Query: 233 VIKAFYEAERA-HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+I+A YE RA H GQMR SG+PY H V A +L + + LLHDT++D S
Sbjct: 22 LIRAAYEFGRAMHDGQMRHSGEPYFTHPVAVAAILTEQQLDDATIITALLHDTIEDTRAS 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I FG VADLV+GV+KL+ L ++S+T +A+ +F+AM+ D R +L+
Sbjct: 82 WSDIAERFGEDVADLVDGVTKLTNLQL------SSSETKQAENFRKLFMAMSKDLRVILV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ A+ K+ + A+ET++I+ PLA R+G+ + +LE+L F+ LNP+
Sbjct: 136 KLADRLHNMRTIKAMRAEKQIQKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNPEGR 195
Query: 411 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + EA ++ + L++ I V GR K YSI KM +K +
Sbjct: 196 ASIIRRFITLQKEAGDVIHRITGDMRHELEEAGIEAEVF-GRAKKPYSIWRKMQEKGMGF 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ DIYG R+I N+ DCY AL V+HQ W VPG+ KDY+++PK NGY
Sbjct: 255 SRLSDIYGFRVITRNDMDCYGALGVIHQRWRAVPGRFKDYVSQPKSNGY 303
>gi|420144910|ref|ZP_14652389.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403467|gb|EJN56709.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 746
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 178/291 (61%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA A H+ Q R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVKKALDFANYVHKEQFRQSGEPYIVHPIQVAAILAELKMDPATVASGFLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS++ +A ++ A + M LAMA D R V++
Sbjct: 87 LGDIQELFGHDVAVIVDGVTKLSKIKYVAHKDELA------ENHRKMILAMAKDLRVVMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIS +K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLRPEKQRRIANETLEIYAPLADRLGISQFKWELEDTALRYLNPQQY 200
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++SK + +A + AI++++ ++ D NI + + GR K +YSI+ KM K
Sbjct: 201 YRIVHLMNSKRAQR--QAYIDEAIKQIKASMTDFNIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV+ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFEEIYDLLAIRVIVDTIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANMY 308
>gi|257792451|ref|YP_003183057.1| (p)ppGpp synthetase I SpoT/RelA [Eggerthella lenta DSM 2243]
gi|317490319|ref|ZP_07948805.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325833401|ref|ZP_08165850.1| GTP diphosphokinase [Eggerthella sp. HGA1]
gi|257476348|gb|ACV56668.1| (p)ppGpp synthetase I, SpoT/RelA [Eggerthella lenta DSM 2243]
gi|316910609|gb|EFV32232.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325485325|gb|EGC87794.1| GTP diphosphokinase [Eggerthella sp. HGA1]
Length = 802
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 177/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KAF A AH GQ R SG+P++ H VE A++LA + + + A LLHDT++D
Sbjct: 72 EAMLAKAFRFASEAHEGQCRKSGEPFVAHPVEVAIILADLRMDVETLCAALLHDTVEDTS 131
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
++ D + F VA LVEGV+K++++ + + A+ + MF+AM+ D R +
Sbjct: 132 VTRDQVEAEFNPQVAQLVEGVTKITRIEVESLTDEQAAT------IRKMFVAMSKDIRVI 185
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
+IKLADRLHNM TL AL +R A+ETLEI+ P+A+RLGI+ K +LE+L F +L P+
Sbjct: 186 VIKLADRLHNMRTLGALREDRRIFKARETLEIYAPIAHRLGINNIKWELEDLSFYYLEPN 245
Query: 409 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++S + E E + I L ++ NI ++ GR K LYSI+ KM KK
Sbjct: 246 KFKQISRMVTESRSEREGYLDQIISILHDEMEKVNIQAQIM-GRPKHLYSIYQKMTKKGK 304
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV++ +DCY AL VH LW +PG+ KDYI PKFN Y
Sbjct: 305 GFSEIYDLIAVRVIVKSVKDCYSALGAVHTLWHPMPGRFKDYIAMPKFNMY 355
>gi|91977118|ref|YP_569777.1| RelA/SpoT family protein [Rhodopseudomonas palustris BisB5]
gi|91683574|gb|ABE39876.1| RelA/SpoT family protein [Rhodopseudomonas palustris BisB5]
Length = 762
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 171/290 (58%), Gaps = 8/290 (2%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 57 EDMLNRAYVYAMMAHGEQTRASGDPYFSHPLEVAAILTNLKLDDATIVAALLHDTIEDTE 116
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I + FG + LVEG++KL +L ++RE +A+ L + LA+AD R +
Sbjct: 117 ATRTEIDKLFGHEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 170
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TLD +P RQR A+ETL+I+ PLA R+G+ + +LE+L F+ L+P+
Sbjct: 171 LIKLADRLHNMRTLDFVPPASRQRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPE 230
Query: 409 QHTELSSKLVECFDEAM-VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
T + +L + + IE A KN + GR K +SI KM +K +
Sbjct: 231 AFTVVMQRLDALAERNRNLIGEIETQLSANLGKNGITAEVTGRRKRPFSIWTKMERKSVG 290
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DIYG R+++ + E CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 291 FEQLSDIYGFRVVLNDVEACYRALGVVHTTWPMVPGRFKDYISTPKQNDY 340
>gi|221310698|ref|ZP_03592545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315022|ref|ZP_03596827.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221319943|ref|ZP_03601237.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324224|ref|ZP_03605518.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SMY]
gi|255767631|ref|NP_390638.2| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|321312288|ref|YP_004204575.1| GTP pyrophosphokinase [Bacillus subtilis BSn5]
gi|384176340|ref|YP_005557725.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|386759315|ref|YP_006232531.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402776914|ref|YP_006630858.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis QB928]
gi|418032062|ref|ZP_12670545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428280212|ref|YP_005561947.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|430755894|ref|YP_007208735.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452915236|ref|ZP_21963862.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
gi|251757446|sp|O54408.3|RELA_BACSU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2739435|gb|AAC46041.1| (p)ppGpp synthetase [Bacillus subtilis subsp. subtilis str. JH642]
gi|225185259|emb|CAB14719.2| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485169|dbj|BAI86244.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|320018562|gb|ADV93548.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis BSn5]
gi|349595564|gb|AEP91751.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351470925|gb|EHA31046.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|384932597|gb|AFI29275.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402482094|gb|AFQ58603.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis QB928]
gi|407959953|dbj|BAM53193.1| GTP pyrophosphokinase [Bacillus subtilis BEST7613]
gi|407965596|dbj|BAM58835.1| GTP pyrophosphokinase [Bacillus subtilis BEST7003]
gi|430020414|gb|AGA21020.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452115584|gb|EME05980.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
Length = 734
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|335428878|ref|ZP_08555788.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|335429314|ref|ZP_08556213.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|334890012|gb|EGM28294.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|334891819|gb|EGM30065.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
Length = 727
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 181/292 (61%), Gaps = 14/292 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + +A+ A+ H Q+R SG+PY++H +E +++L + A +AAGL+HD L+D +
Sbjct: 26 NIIKRAYQYAKEKHAKQIRKSGEPYIIHPIEVSLILTSFHAGPKTIAAGLMHDVLEDTEV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG + LV+GV+KL Q+ +++E +A MFLAMA D R ++
Sbjct: 86 TEEEMADLFGNEITTLVDGVTKLGQIKYVSKEQ------AQAKNHQKMFLAMAKDIRVII 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL +P K+ R +KETL IF P+A+RLG+ K +LE+ C + ++P++
Sbjct: 140 IKLADRLHNMRTLKHMPRHKQVRISKETLGIFAPIAHRLGMYRLKSELEDRCLRFIDPEE 199
Query: 410 HTELSS----KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ ++S K E D+ + S I +++ LK+++I F + GR K+++S+H KM +K
Sbjct: 200 YYYIASLINTKQREREDD--IDSIINEIKGCLKEQDIKF-AIKGRIKNIFSVHKKMREKN 256
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ LR+IV++E CYQ L ++H W +P + KDYI PK N Y
Sbjct: 257 KEFSEIFDLLALRIIVDDEASCYQVLGLIHSNWKPIPKRFKDYIAMPKPNMY 308
>gi|425734810|ref|ZP_18853127.1| (p)ppGpp synthetase I, SpoT/RelA [Brevibacterium casei S18]
gi|425480746|gb|EKU47910.1| (p)ppGpp synthetase I, SpoT/RelA [Brevibacterium casei S18]
Length = 765
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 177/302 (58%), Gaps = 18/302 (5%)
Query: 222 QLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLL 281
Q H D V++A+ AE AHRGQ R SGDPY+ H V A +LA IG +AA LL
Sbjct: 41 QASHPKADIDLVVRAYTVAEEAHRGQTRKSGDPYITHPVAVATILAEIGMLPVTLAAALL 100
Query: 282 HDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA 341
HDT++D S + + +FG VA +V+GV+KL +L T + +++ + M +A
Sbjct: 101 HDTVEDTDYSLEQLTESFGPEVAAMVDGVTKLDKL--------TYGQVAQSETVRKMIVA 152
Query: 342 MA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENL 400
MA D R ++IKLADRLHN T +P + A+ETLEI+ PLA+RLG++T K +LE+L
Sbjct: 153 MAKDIRVLVIKLADRLHNARTWKFVPAASSTKKARETLEIYAPLAHRLGMNTIKWELEDL 212
Query: 401 CFKHLNPDQHTELSSKLVECFDE-----AMVTSAIEKLEQALKDKNISFLVLCGRHKSLY 455
F+ L+P + E+ + + E A V+S +L+ L + I + GR K Y
Sbjct: 213 SFQVLHPKVYDEVVRLVADRAPEREKYLATVSS---ELQSELAESGIE-AAITGRPKHYY 268
Query: 456 SIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFN 515
SI+ KM+ + +I+D+ G+R++VE +CY L +VH W VPG+ KDYI PK+N
Sbjct: 269 SIYQKMVVRGHEFADIYDLVGVRVLVETVRECYATLGIVHARWNPVPGRFKDYIAMPKYN 328
Query: 516 GY 517
Y
Sbjct: 329 MY 330
>gi|417645315|ref|ZP_12295229.1| GTP diphosphokinase [Staphylococcus warneri VCU121]
gi|445059472|ref|YP_007384876.1| GTP pyrophosphokinase [Staphylococcus warneri SG1]
gi|330683916|gb|EGG95684.1| GTP diphosphokinase [Staphylococcus epidermidis VCU121]
gi|443425529|gb|AGC90432.1| GTP pyrophosphokinase [Staphylococcus warneri SG1]
Length = 729
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 186/307 (60%), Gaps = 17/307 (5%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
AK +L+ ++ + +V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSESEYQ-------YVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+ AG LHD ++D ++D + F VA +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTAYTFDDVKNMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 393 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE+ ++++ Q+ + + K EA + +AI ++E + NI + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYIDNAIGQIETEMDKMNIVGEI-NGR 241
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +YSI+ KM+K+K D+I D+ +R+IV DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAIRIIVNTINDCYAILGLVHTLWKPMPGRFKDYIA 301
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 302 MPKQNMY 308
>gi|427723832|ref|YP_007071109.1| (p)ppGpp synthetase I SpoT/RelA [Leptolyngbya sp. PCC 7376]
gi|427355552|gb|AFY38275.1| (p)ppGpp synthetase I, SpoT/RelA [Leptolyngbya sp. PCC 7376]
Length = 749
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 185/313 (59%), Gaps = 12/313 (3%)
Query: 210 LETYAKEFLANAQLKH-KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
L ++ K++L ++ + + KAF A H GQ R SG PY+ H V A LL
Sbjct: 16 LPSWLKDYLYGGGVQEISVGDRQLICKAFRFAHELHEGQERKSGRPYIEHPVAVAGLLRD 75
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
+G NS ++AAG LHD ++D ++ + I FG V LVEGV+KL++ + +SK
Sbjct: 76 LGGNSAMIAAGFLHDVVEDTDVTPEEIEEHFGEEVRQLVEGVTKLTKFT-------FSSK 128
Query: 329 T-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 386
T +A+ MFL+MA D R +++KLADRLHNM TL+ L K++R A ET EIF PLAN
Sbjct: 129 TERQAENFRRMFLSMAEDIRVIVVKLADRLHNMRTLEPLRPDKQKRIALETKEIFAPLAN 188
Query: 387 RLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISF 444
RLGI +K +LE+LCFK+L + + + E EA V AI+ + L +
Sbjct: 189 RLGIWRFKWELEDLCFKYLESEAFRAMQDHISEKRAEREARVNEAIDIVRDRLHKLKLHV 248
Query: 445 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 504
+ GR K LYSI+ KM ++ DEI DI G+R+IVE+ ++CY+AL V+H + +PG+
Sbjct: 249 WEIKGRPKHLYSIYDKMQRQHKEFDEIFDISGIRVIVESTDECYRALAVIHDAFKPIPGR 308
Query: 505 MKDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 309 FKDYIGLPKPNRY 321
>gi|398311619|ref|ZP_10515093.1| GTP pyrophosphokinase RelA/SpoT [Bacillus mojavensis RO-H-1]
Length = 734
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|375087257|ref|ZP_09733639.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
gi|374562074|gb|EHR33409.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
Length = 740
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ A AH Q R SG+ Y+ H + AM+L + + +AA LLHD ++D
Sbjct: 27 DLITKAYNLAYEAHADQKRISGEMYITHPLHVAMILTDLHIDEVTIAAALLHDVVEDTIY 86
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG VA L++GV+KLS++ ++E+ + + MFLAMA D R ++
Sbjct: 87 TIEQMKELFGEEVAMLIDGVTKLSKMKYKSKEDQ------QLETYRKMFLAMAKDIRVIM 140
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++R AKETLE++ PLANRLGIS K +LE+LC ++L P+
Sbjct: 141 IKLADRLHNMRTLKYMREEKQKRIAKETLEVYAPLANRLGISNIKWELEDLCLRYLEPET 200
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + +E + A+ K++Q ++ + GR K YSI+ KM K
Sbjct: 201 YYDLVDKVNQKREERQGFINDAVAKIQQEFDKIHLKGEI-KGRAKHFYSIYRKMKKSNKD 259
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +I D+ +R++V+ DCY L ++H +W +PG+ KDYI PK NGY
Sbjct: 260 ISDIFDLLAVRVLVQTIPDCYTVLGIIHAMWKPLPGRFKDYIAVPKTNGY 309
>gi|390567578|ref|ZP_10247906.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia terrae BS001]
gi|420252454|ref|ZP_14755564.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderia sp. BT03]
gi|389940479|gb|EIN02280.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia terrae BS001]
gi|398054679|gb|EJL46791.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderia sp. BT03]
Length = 793
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 186/318 (58%), Gaps = 17/318 (5%)
Query: 203 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 262
D + L T ++L+ ++K V AF+ ++ AH GQ R SG+PY+ H V
Sbjct: 56 DVVSIAKLTTALSDYLSPEEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAV 108
Query: 263 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 322
A A+ ++ + A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE
Sbjct: 109 AETCASWKLDAQSIMAALLHDVMEDQGVTKTELAERFGPKVAELVDGLSKLDKMEFRSRE 168
Query: 323 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 381
+A+ M LAMA D R +L+KLADRLHNM TL A+P KR+R A+ETL+I+
Sbjct: 169 E------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPPEKRRRVARETLDIY 222
Query: 382 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKD 439
P+A+RLG++ +L++L F + NP ++ L K +V +E +++A+ D
Sbjct: 223 APIAHRLGLNNTYRELQDLSFANFNPHRYATLEKAVKAARGNRREVVGKILESVQRAISD 282
Query: 440 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 499
+ V GR K+++SI+ KM K+L+ ++ D+YG R++VEN +CY L +H L+
Sbjct: 283 AKLDAEV-TGREKTIFSIYKKMRDKQLSFSQVLDVYGFRVVVENPLECYTCLGALHALYK 341
Query: 500 EVPGKMKDYITRPKFNGY 517
VPGK KDYI PK NGY
Sbjct: 342 PVPGKFKDYIAIPKVNGY 359
>gi|197303672|ref|ZP_03168709.1| hypothetical protein RUMLAC_02399 [Ruminococcus lactaris ATCC
29176]
gi|197297192|gb|EDY31755.1| RelA/SpoT family protein [Ruminococcus lactaris ATCC 29176]
Length = 774
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 183/289 (63%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH+ Q+R SG+PY++H + ++LA + + + AG+LHD ++D ++
Sbjct: 59 MIEKAYRIGKEAHKDQVRKSGEPYIIHPLWVGIILAELEMDKETIVAGMLHDVVEDTEMT 118
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R ++I
Sbjct: 119 LDDITREFGEEVALLVDGVTKLGQLS-----YSQDKLEVQAENLRKMFLAMAKDIRVIII 173
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ + K++ A+ET++I+ P+A RLGIS K +L++L K+ P+ +
Sbjct: 174 KLADRLHNMRTLEFMTEAKQKEKARETMDIYAPIAQRLGISKIKTELDDLSLKYYQPEVY 233
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L L + E V + ++ + +++ +I V GR K +SI+ KM+ + T+
Sbjct: 234 YQLVKDLNARKTEREEFVQQIVAEVSKHMENASIKAKVY-GRVKHFFSIYKKMVNQNKTL 292
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+++D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 293 DQVYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMY 341
>gi|296331695|ref|ZP_06874164.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675346|ref|YP_003867018.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151290|gb|EFG92170.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413590|gb|ADM38709.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 734
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|406981761|gb|EKE03162.1| hypothetical protein ACD_20C00238G0002 [uncultured bacterium]
Length = 718
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 186/298 (62%), Gaps = 11/298 (3%)
Query: 224 KHKIFREDFVIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLH 282
+H+ E I++ Y+ A H+GQ R S +PY++H VE A +LA + A++ + A LLH
Sbjct: 17 QHRPEEEIKKIRSAYDFAASWHKGQYRISEEPYIVHPVEVANILANLQADTDTICAALLH 76
Query: 283 DTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM 342
D L+D + I FG V +LV GV+KLS+ S ++E +A+ MFLAM
Sbjct: 77 DILEDTDTKPEQIKELFGEDVLNLVNGVTKLSKYSFNSKEER------QAENFRKMFLAM 130
Query: 343 A-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLC 401
A D R + +KLADRLHNM TL+ + K++ A+ET+EIF PLANRLG+ + +LE+L
Sbjct: 131 AEDVRVIFLKLADRLHNMRTLNYMAPHKQKEIAQETVEIFAPLANRLGMGKIRAELEDLS 190
Query: 402 FKHLNPDQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHC 459
++LNP+++ E++ + + E V + I+K+ +LK+ NI V+ GR K+ SI+
Sbjct: 191 LRYLNPEKYFEIAQLVAQSKAERDLTVQAIIDKINSSLKNMNIE-AVITGRAKNYNSIYN 249
Query: 460 KMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
KM +++ + +++DI R++V+NE++CY+ L V+H + +PG+ KDYI PK N Y
Sbjct: 250 KMTRQQKSYQDLYDITAARIVVDNEKECYEVLGVIHSAFKPIPGRFKDYIAMPKSNLY 307
>gi|333394996|ref|ZP_08476815.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|336392924|ref|ZP_08574323.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 746
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 178/291 (61%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA A H+ Q R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVKKALDFATYVHKEQFRQSGEPYIVHPIQVAAILAELKMDPATVASGFLHDVVEDTNIT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG VA +V+GV+KLS++ +A ++ A + M LAMA D R V++
Sbjct: 87 LGDIQELFGHDVAVIVDGVTKLSKIKYVAHKDELA------ENHRKMILAMAKDLRVVMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIS +K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLRPEKQRRIANETLEIYAPLADRLGISQFKWELEDTALRYLNPQQY 200
Query: 411 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++SK + +A + AI++++ ++ D NI + + GR K +YSI+ KM K
Sbjct: 201 YRIVHLMNSKRAQR--QAYIDEAIKQIKASMTDFNIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R+IV+ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 258 QFEEIYDLLAIRVIVDTIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANMY 308
>gi|407720009|ref|YP_006839671.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti Rm41]
gi|407318241|emb|CCM66845.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti Rm41]
Length = 741
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 177/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRQEIDDLFGEDIGALVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET++I+ PLA R+G+ + +LENL F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSAEKRARISEETMDIYAPLAGRMGMQDMREELENLSFRHINPE 193
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E + E ++ E+L + L+ + ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTRRLQELSERNEGLIKKIEEELSELLQAEGLTDAQVRGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D++G R+IV + CY+AL +VH W VPG+ KDY++ PK N Y
Sbjct: 254 SFEQLSDVWGFRIIVNDIPSCYRALGIVHTRWRVVPGRFKDYVSTPKQNDY 304
>gi|153816124|ref|ZP_01968792.1| hypothetical protein RUMTOR_02372 [Ruminococcus torques ATCC 27756]
gi|145846609|gb|EDK23527.1| RelA/SpoT family protein [Ruminococcus torques ATCC 27756]
Length = 438
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 202/343 (58%), Gaps = 23/343 (6%)
Query: 189 SSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRE----------DFVIKAFY 238
+ A +EL N+E IV+G+ +++ QL H + + KA+
Sbjct: 9 AGTAEYEELNKNLE--IVDGHAVKAPEDYQDPEQLYHVLIERVRKYHPSADITMIEKAYR 66
Query: 239 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 298
+ AHR Q+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D +
Sbjct: 67 IGKEAHRDQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGE 126
Query: 299 FGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRL 356
FG VA LV+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRL
Sbjct: 127 FGEEVALLVDGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRL 180
Query: 357 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 416
HNM TL+ + K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L
Sbjct: 181 HNMRTLEFMTPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRD 240
Query: 417 L--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 474
L + E V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D+
Sbjct: 241 LNRRKTEREEFVQQIVAEVSKHMKNAHIEAKV-YGRVKHFFSIYKKMVNQNKTLDQVYDL 299
Query: 475 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 300 FAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMY 342
>gi|326780479|ref|ZP_08239744.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces griseus XylebKG-1]
gi|326660812|gb|EGE45658.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces griseus XylebKG-1]
Length = 874
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 158 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 217
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 218 LKRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 269
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 270 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 329
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 330 VRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 385
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 386 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 434
>gi|350266929|ref|YP_004878236.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599816|gb|AEP87604.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 734
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|374709317|ref|ZP_09713751.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus inulinus CASD]
Length = 724
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 180/288 (62%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A+ AH+GQ+R SG+PY++H +E A +L + + T + +G LHD ++D ++
Sbjct: 22 VKEAYRFADEAHKGQVRKSGEPYIIHPIEVAGILVQLNMDVTTIVSGFLHDVVEDTRVTL 81
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
D I FG VA+LV+GV+KL ++E+ +A+ MF+AMA D R V++K
Sbjct: 82 DDIRVKFGDNVAELVDGVTKLRNFEYTSKEDQ------QAENHRKMFVAMARDLRCVIVK 135
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL + K+ + A ETLEI+ PLANRLGIS K +LE++ ++L P Q+
Sbjct: 136 LADRLHNMRTLKYMRHEKQIQKANETLEIYAPLANRLGISAIKWELEDISLRYLKPQQYY 195
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
++ + + + + EA + +E L+ +K +I V GR K +YSI+ KM+ + +
Sbjct: 196 KIVNLMKQKREEREAYIAKVVEDLKAYVKSVHIPAEV-SGRPKHIYSIYRKMVNQHKQFN 254
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D++ +R+IV+ +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 255 EIYDLFAVRIIVKTIKDCYAILGIIHTHWKPMPGRFKDYIAMPKPNMY 302
>gi|15964818|ref|NP_385171.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti 1021]
gi|334315609|ref|YP_004548228.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti AK83]
gi|384528777|ref|YP_005712865.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti BL225C]
gi|384535182|ref|YP_005719267.1| putative GTP pyrophosphokinase (ATP:GTP 3'- pyrophosphotransferase)
protein [Sinorhizobium meliloti SM11]
gi|418400042|ref|ZP_12973586.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti CCNWSX0020]
gi|433612835|ref|YP_007189633.1| (p)ppGpp synthetase, RelA/SpoT family [Sinorhizobium meliloti GR4]
gi|11321260|gb|AAG34109.1|AF306550_1 (p)ppGpp synthetase [Sinorhizobium meliloti]
gi|15073997|emb|CAC45644.1| Putative GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Sinorhizobium meliloti 1021]
gi|47716787|gb|AAT37571.1| RelA [Sinorhizobium meliloti]
gi|51451369|gb|AAU03121.1| RelA [Sinorhizobium meliloti]
gi|333810953|gb|AEG03622.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti BL225C]
gi|334094603|gb|AEG52614.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti AK83]
gi|336032074|gb|AEH78006.1| putative GTP pyrophosphokinase (ATP:GTP 3'- pyrophosphotransferase)
protein [Sinorhizobium meliloti SM11]
gi|359505940|gb|EHK78458.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti CCNWSX0020]
gi|429551025|gb|AGA06034.1| (p)ppGpp synthetase, RelA/SpoT family [Sinorhizobium meliloti GR4]
Length = 741
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 177/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRQEIDDLFGEDIGALVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET++I+ PLA R+G+ + +LENL F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSAEKRARISEETMDIYAPLAGRMGMQDMREELENLSFRHINPE 193
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E + E ++ E+L + L+ + ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTRRLQELSERNEGLIKKIEEELSELLQAEGLTDAQVRGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D++G R+IV + CY+AL +VH W VPG+ KDY++ PK N Y
Sbjct: 254 SFEQLSDVWGFRIIVNDIPSCYRALGIVHTRWRVVPGRFKDYVSTPKQNDY 304
>gi|297623247|ref|YP_003704681.1| (p)ppGpp synthetase I SpoT/RelA [Truepera radiovictrix DSM 17093]
gi|297164427|gb|ADI14138.1| (p)ppGpp synthetase I, SpoT/RelA [Truepera radiovictrix DSM 17093]
Length = 729
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 181/297 (60%), Gaps = 17/297 (5%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE AHRG R SG+PY+ H V LLA + + + AGLLHDT++D ++++
Sbjct: 24 EAYALAEAAHRGVTRRSGEPYITHPVAVTELLAEMHLDVDALIAGLLHDTVEDTDVTFEE 83
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIKLA 353
I FGA V +VEG +K+S+L R+ ++ +A+ L M LAM D R +L+KLA
Sbjct: 84 IEARFGAPVRRIVEGETKISKLK--IRQLEAGAEEEQAENLRQMLLAMVGDVRIILVKLA 141
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL +P K++R A+ETLEIF PLA+RLGI+ K +LE L F +L P+++ L
Sbjct: 142 DRLHNMRTLRHMPPEKQRRIARETLEIFAPLAHRLGINHIKSELEELGFFYLEPERYRAL 201
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ EA V +I LE+ L + ++F + GR K LYS++ KM + +D+I
Sbjct: 202 QRQVRMRRAEREAYVQRSIALLEERLAQEGLTFEI-SGRSKGLYSVYRKMQRDAKNLDQI 260
Query: 472 HDIYGLRLI---------VENEED--CYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+ +R I VE+EE CY+AL ++H +W +PG+ KDY+ PK NGY
Sbjct: 261 FDLMAIRAILTPTGGGESVEDEEKAICYRALGIIHSIWTPIPGRFKDYVAVPKPNGY 317
>gi|298529911|ref|ZP_07017313.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509285|gb|EFI33189.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
Length = 720
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 183/289 (63%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH GQ+R SG+PYL H +E + +LA + ++ +AAGLLHDT++D S
Sbjct: 22 LIQKAYVFSASAHAGQIRLSGEPYLSHPLEVSDMLADLHLDADTIAAGLLHDTVEDTKAS 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLI 350
+ + FG VA +V+GV+K+ ++S ++E +A+ + M LAMAD R +L+
Sbjct: 82 LEEVRDQFGEEVARIVKGVTKIGKMSFDSKEE------AQAENIRKMILAMADDIRVILV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ K++ A+ET++I+ PLANRLG+ K+QLE+L +++ PD +
Sbjct: 136 KLADRLHNMKTLEHQSSFKQKAVAQETMDIYAPLANRLGLYRLKIQLEDLSLRYMKPDVY 195
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++ + + E + + +E+ L+ +I V GR K +YSI+ KM+++ L++
Sbjct: 196 FQIQEGVNKQKVVGEQYIQKVCQNIEEILEQNSIEGRV-SGRMKHIYSIYHKMVQQGLSL 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ DI R++V++ +DCY L +VH +W VPG+ KDYI+ PK N Y
Sbjct: 255 DQVFDIIAFRVLVQSIKDCYAVLGLVHSIWKPVPGRFKDYISMPKANMY 303
>gi|374261430|ref|ZP_09620014.1| hypothetical protein LDG_6401 [Legionella drancourtii LLAP12]
gi|363538325|gb|EHL31735.1| hypothetical protein LDG_6401 [Legionella drancourtii LLAP12]
Length = 708
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 175/286 (61%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQMR SG+PY+ H V A++LA + + + A LLHD ++D +S +
Sbjct: 25 QAYLVAEKAHYGQMRRSGEPYITHPVAAALILARMRLDYQTIMATLLHDVVEDTSVSKED 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG + LV+GV+KL+++ + +A+ M LAM D R +++KLA
Sbjct: 85 LTRQFGEDITALVDGVTKLTKI------KFESKAEAQAENFRKMVLAMVKDIRVIIVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL A+P KR+R A ETLEI+ P+ANRLG+ + V LE+L F+ L P ++ +
Sbjct: 139 DRLHNMRTLGAMPPAKRRRIAIETLEIYAPIANRLGMHSIYVGLEDLGFQALYPMRYRAI 198
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + +T IE+ L+QAL NI + + GR K LYSI+ KM KK + EI
Sbjct: 199 KSAVEKSRGNRRELTQTIERDLQQALAQLNIPYEQVFGRQKHLYSIYRKMRLKKASFTEI 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ R+I E+ + CY+ L +H + VP + KDYI PK NGY
Sbjct: 259 TDVFAFRVITEDIDSCYRILGALHCTYKPVPQRFKDYIGIPKANGY 304
>gi|182439815|ref|YP_001827534.1| ppGpp synthetase [Streptomyces griseus subsp. griseus NBRC 13350]
gi|178468331|dbj|BAG22851.1| putative ppGpp synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 858
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 142 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 201
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 202 LKRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 253
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 254 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 313
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 314 VRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 369
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 370 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 418
>gi|348174215|ref|ZP_08881109.1| GTP pyrophosphokinase [Saccharopolyspora spinosa NRRL 18395]
Length = 772
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 174/287 (60%), Gaps = 14/287 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + AGLLHDT++D S +
Sbjct: 68 RAYDVAEEKHSSQRRKSGDPYITHPLAVATILAELGMDTTTLVAGLLHDTVEDTDYSLEK 127
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V LV+GV+KL ++ KL EA+ + M +AMA D R ++IKLA
Sbjct: 128 LGAEFGEEVGHLVDGVTKLDKV-KLG-------AAAEAETIRKMIIAMARDPRVLVIKLA 179
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 180 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATIKWELEDLAFAILQPKKYDEI 239
Query: 414 SSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
+LV + + + I +L L ++ V GR K YSIH KM+ + D+
Sbjct: 240 V-RLVANRAPSRDTYLRTVIHELSHQLDTARLAAKV-EGRPKHYYSIHQKMIVRGRDFDD 297
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
IHD+ G+R++V+ DCY A+ VVH LW +PG+ KDYI +P+F Y
Sbjct: 298 IHDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVY 344
>gi|402571498|ref|YP_006620841.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus meridiei
DSM 13257]
gi|402252695|gb|AFQ42970.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus meridiei
DSM 13257]
Length = 744
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 179/305 (58%), Gaps = 10/305 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E L + K R V KA++ AE AHR Q+R SG+ Y+LH +E A +L + +
Sbjct: 5 ELLVKMKKKFPQSRLAIVDKAYHFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEAT 64
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+AA LLHD ++D + I + FG+ +A LV+GV+KL ++ ++ + + L
Sbjct: 65 IAASLLHDVVEDTEFTIADIEKEFGSEIALLVDGVTKLGRIEYKSKVEQ------QVENL 118
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
MFLAMA D R +LIKLADRLHNM TL K++ A+ETLEIF PLANRLGI K
Sbjct: 119 RKMFLAMAKDIRVILIKLADRLHNMRTLKYHSEQKQKEIAQETLEIFAPLANRLGIFRIK 178
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+LE+L F++L P ++ +L L EA + I ++ + L + I F + GR K
Sbjct: 179 WELEDLSFRYLKPQEYYDLVEGIALKRREREAYINEVIVQMRERLDEVEI-FADIAGRPK 237
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
YSI+ KM + + EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI P
Sbjct: 238 HFYSIYRKMTTQNKDLSEIYDLMAIRVIVDSVNDCYGALGIIHTMWKPIPGRFKDYIAMP 297
Query: 513 KFNGY 517
K N Y
Sbjct: 298 KPNMY 302
>gi|376001755|ref|ZP_09779611.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
gi|375329867|emb|CCE15364.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
Length = 764
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 177/290 (61%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H+GQ R SG+PY+ H + A +L +G+++ +VAAG LHD ++D +
Sbjct: 43 DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDV 102
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG V LVEGV+KLS+ + +NT + +A+ MFLAMA D R ++
Sbjct: 103 TPEELESHFGPEVRHLVEGVTKLSKFNF----SNTTER--QAENFRRMFLAMAQDIRVIV 156
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ + K++ A ET EIF PLANRLGI K +LE+L FK++ P+
Sbjct: 157 VKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEA 216
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ ++ + E + + + L ++ I + GR K LY I+ KM ++
Sbjct: 217 YREIQIRVADRRATREEKLAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQ 276
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI LRLIVE E+CY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 277 FHEIYDIAALRLIVETNEECYRALAIVHDSYRPIPGRFKDYIGLPKPNRY 326
>gi|154505866|ref|ZP_02042604.1| hypothetical protein RUMGNA_03408 [Ruminococcus gnavus ATCC 29149]
gi|336432177|ref|ZP_08612016.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153793884|gb|EDN76304.1| RelA/SpoT family protein [Ruminococcus gnavus ATCC 29149]
gi|336019336|gb|EGN49062.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 768
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 183/289 (63%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH+ Q+R SG+PY++H + ++LA + + + AG+LHDT++D ++
Sbjct: 53 LIEKAYKLSREAHKEQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDTVEDTEMT 112
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R ++I
Sbjct: 113 VEDITREFGEEVALLVDGVTKLGQLS-----YSKDKLEVQAENLRKMFLAMAKDIRVIII 167
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ + K++ A+ET++I+ P+A RLGIS K +L++L K+ P+ +
Sbjct: 168 KLADRLHNMRTLEFMVPAKQKEKARETMDIYAPIAQRLGISKIKTELDDLSLKYYQPEVY 227
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L L E E V + ++ +++ +I V GR K +SI+ KM+ + T+
Sbjct: 228 FQLVKDLNERKTEREEFVQQIVAEVSHHMENAHIQAKVY-GRVKHFFSIYKKMVNQNKTL 286
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+++D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 287 DQVYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMY 335
>gi|373451938|ref|ZP_09543856.1| RelA/SpoT family protein [Eubacterium sp. 3_1_31]
gi|371967370|gb|EHO84841.1| RelA/SpoT family protein [Eubacterium sp. 3_1_31]
Length = 738
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 175/291 (60%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF AE+ H GQ R SG+PY++H ++ +LA + +AAGLLHD ++D +
Sbjct: 32 DLITRAFLCAEKNHAGQYRKSGEPYIIHAIQVGYILAMLRTGPKTIAAGLLHDVVEDCDV 91
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ I FG VA LVE V+K+ L K E K A +F+AMA D R +L
Sbjct: 92 CLEQISEMFGEEVASLVESVTKIGAL-KFKDE-----KEYLASNHRKIFIAMAKDVRVIL 145
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKL+DRLHNM TL + K+Q+ A ETLE++ P+A+RLGIS K +LE+LCF++LN ++
Sbjct: 146 IKLSDRLHNMRTLQYMTPQKQQKIASETLEVYAPIAHRLGISDIKNELEDLCFQYLNKEK 205
Query: 410 HTELSSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ E+ +KLVE +A V S I ++ L + I + + GR K LYSI+ KM+ K
Sbjct: 206 YYEI-AKLVEKRKTERDAQVQSMIREISSLLDEHQIKYRIF-GRSKHLYSIYKKMITKNK 263
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI D+ +R+I + + CY+ L +H + +PG+ KDYI PK N Y
Sbjct: 264 RFEEILDLLAIRIITDTDTACYEILGYIHAKYRPIPGRFKDYIAMPKVNMY 314
>gi|332799394|ref|YP_004460893.1| (p)ppGpp synthetase I SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697129|gb|AEE91586.1| (p)ppGpp synthetase I, SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
Length = 721
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ A+ AH GQ R SG+ ++ H + AM+LA + + +AAGLLHD ++D
Sbjct: 20 DLIRKAYMFAKEAHSGQHRVSGELFISHPLGVAMILADLELDIPTIAAGLLHDVVEDTDY 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I + FG+ +A LV+GV+KL +L +E +A+ L MF AMA D R +L
Sbjct: 80 TIEDIEKIFGSEIAILVDGVTKLGKLEFKTKEEQ------QAENLRKMFFAMAKDIRIIL 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL ++P K++ A ET++IF PLA+RLGIS K +LE+L F++L P+
Sbjct: 134 IKLADRLHNMRTLKSMPEEKQREKAMETIDIFAPLAHRLGISKIKWELEDLAFRYLEPEH 193
Query: 410 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + E + I+ L + L I+ + GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAKKRQERENHINKMIDILNERLLATGINAEI-QGRPKHFYSIYKKMKDQNKT 252
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY AL VVH LW +PG+ KDYI PK N Y
Sbjct: 253 FEQIYDLTAVRVIVNTVKDCYGALGVVHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|354721375|ref|ZP_09035590.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Enterobacter mori
LMG 25706]
Length = 704
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 169/286 (59%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA+LVEGVSKL +L N K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKL------NFRDKKEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV + + CY+ L +H L+ PG+MKDYI PK NGY
Sbjct: 258 MDIYAFRVIVHDSDTCYRVLGQMHSLYKPRPGRMKDYIAIPKANGY 303
>gi|160893486|ref|ZP_02074271.1| hypothetical protein CLOL250_01037 [Clostridium sp. L2-50]
gi|156864881|gb|EDO58312.1| RelA/SpoT family protein [Clostridium sp. L2-50]
Length = 777
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 181/290 (62%), Gaps = 17/290 (5%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A +AH GQ+R SG+PY++H + A++LA + + + AG+LHD ++D ++ +
Sbjct: 71 KAYKVASKAHEGQLRKSGEPYIMHPLCVAIILAELELDKETIVAGILHDVVEDTVMTSEE 130
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I F VA LVEGV+KL+QL + T V+A+ L MFL+MA D R +LIKLA
Sbjct: 131 IAAEFSEEVAFLVEGVTKLTQL-----KMTTDKIEVQAENLRKMFLSMAKDIRVILIKLA 185
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHN+ TL K+ A+ET++I+ P+A+RLGIS KV+L++L K+L P+ + +L
Sbjct: 186 DRLHNLRTLQYQSPAKQVEKARETMDIYAPIAHRLGISKIKVELDDLSMKYLMPEVYKDL 245
Query: 414 SSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
++++ E + + +V + ++ A D I GR K L+SI+ KM + T
Sbjct: 246 TAQIDARMHEREAYIKRIVADVKKHIDNAHLDAEID-----GRVKHLFSIYKKMKNQNKT 300
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+I+DI+ +R+ VE DCY AL ++H+++ +PG+ KDYI PK N Y
Sbjct: 301 LDQIYDIFAVRIKVETVRDCYSALGIIHEMYKPIPGRFKDYIAMPKSNMY 350
>gi|438002543|ref|YP_007272286.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
gi|432179337|emb|CCP26310.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
Length = 716
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 178/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ A+ AH GQ R SG+ ++ H + AM+LA + + +AAGLLHD ++D
Sbjct: 15 DLIRKAYMFAKEAHSGQHRVSGELFISHPLGVAMILADLELDIPTIAAGLLHDVVEDTDY 74
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I + FG+ +A LV+GV+KL +L +E +A+ L MF AMA D R +L
Sbjct: 75 TIEDIEKIFGSEIAILVDGVTKLGKLEFKTKEEQ------QAENLRKMFFAMAKDIRIIL 128
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL ++P K++ A ET++IF PLA+RLGIS K +LE+L F++L P+
Sbjct: 129 IKLADRLHNMRTLKSMPEEKQREKAMETIDIFAPLAHRLGISKIKWELEDLAFRYLEPEH 188
Query: 410 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L K+ + E + I+ L + L I+ + GR K YSI+ KM + T
Sbjct: 189 YYDLVEKVAKKRQERENHINKMIDILNERLLATGINAEI-QGRPKHFYSIYKKMKDQNKT 247
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++I+D+ +R+IV +DCY AL VVH LW +PG+ KDYI PK N Y
Sbjct: 248 FEQIYDLTAVRVIVNTVKDCYGALGVVHTLWKPIPGRFKDYIAMPKPNMY 297
>gi|328543518|ref|YP_004303627.1| GTP pyrophosphokinase [Polymorphum gilvum SL003B-26A1]
gi|326413262|gb|ADZ70325.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp
synthetase I) ((P)ppGpp synthetase) [Polymorphum gilvum
SL003B-26A1]
Length = 735
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 173/291 (59%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H QMRASGDPY H +E A +L + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGSQMRASGDPYFSHPLEVAAILTDLRLDEATIAVALLHDTIEDTD 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L +++ K +A+ + LA+AD R +
Sbjct: 80 ATRSEIDTVFGEEIGKLVEGLTKIKRLDLVSQ------KAKQAENFRKLLLAIADDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL +P KR R A+ET+EI+ PLA R+G+ + +LE++ F+ LNP+
Sbjct: 134 LVKLADRLHNMRTLQHMPEHKRGRIAEETMEIYAPLAGRMGMQDMREELEDIAFRTLNPE 193
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L + ++ ++ E L L ++ I+ +V GR K YSI KM +K L
Sbjct: 194 AFDTIAERLETLRARNKGLIAEIEETLTARLAERGIAAIV-KGREKRPYSIFRKMQQKSL 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DIYG R+IV E CY+ L V+H W+ VPG+ KDYI+ PK N Y
Sbjct: 253 GFEQLSDIYGFRVIVGTVEACYRVLGVIHTTWSTVPGRFKDYISTPKQNDY 303
>gi|443632083|ref|ZP_21116263.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348198|gb|ELS62255.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 734
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEGAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVEEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|365889055|ref|ZP_09427776.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3809]
gi|365335232|emb|CCE00307.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3809]
Length = 765
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 174/291 (59%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 55 EDLLNRAYVYAMKAHGSQTRASGDPYFTHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 114
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I R FG + LVEG++KL +L ++RE +A+ L + LA+A D R +
Sbjct: 115 ATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 168
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL+ +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P
Sbjct: 169 LVKLADRLHNMRTLEFVPEASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPQ 228
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + +L D ++ +L + +D ++ V GR K +SI KM +K +
Sbjct: 229 AYGVVMQRLDALADRNRNLIGEIESQLARKFRDHGLTARVF-GRRKRPFSIWTKMERKSI 287
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+I+ + E CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 288 GFEQLSDIFGFRVIMPDLESCYRALGIVHTTWPVVPGRFKDYISTPKQNDY 338
>gi|150395901|ref|YP_001326368.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium medicae WSM419]
gi|150027416|gb|ABR59533.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium medicae WSM419]
Length = 741
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 177/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRQEIDGLFGEDIGALVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET++I+ PLA R+G+ + +LENL F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSAEKRARISEETMDIYAPLAGRMGMQDMREELENLSFRHINPE 193
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E + E ++ E+L + L+ + ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTRRLQELSERNEGLIKKIEEELSELLQAEGLADAQVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D++G R+IV + CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVWGFRIIVSDIPACYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|350545396|ref|ZP_08914883.1| GTP pyrophosphokinase , (p)ppGppsynthetase II /
Guanosine-3',5'-bis(diphosphate)3'-pyrophosphohydrolase
[Candidatus Burkholderia kirkii UZHbot1]
gi|350526830|emb|CCD39459.1| GTP pyrophosphokinase , (p)ppGppsynthetase II /
Guanosine-3',5'-bis(diphosphate)3'-pyrophosphohydrolase
[Candidatus Burkholderia kirkii UZHbot1]
Length = 795
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 175/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R G+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 84 VKAAFHFSDEAHLGQYRQRGEPYITHPVAVAEICAGWKLDAQSIMAALLHDVIEDQGVTK 143
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
I FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 144 TEITERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 197
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP+++
Sbjct: 198 LADRLHNMHTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPNRYA 257
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++ + D I+ V GR K++YSI+ KM K+L+
Sbjct: 258 TLEKAVKAARGNRREVVGKILEAVQRTIADAKINAEV-TGREKTIYSIYKKMRDKQLSFS 316
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 317 QVLDVYGFRVVVESALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 364
>gi|347753839|ref|YP_004861403.1| (p)ppGpp synthetase RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
gi|347586357|gb|AEP10887.1| (p)ppGpp synthetase, RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
Length = 731
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 183/290 (63%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ + + H+GQ+R SG+PYL+H + A +LA + + V GLLHD ++D +
Sbjct: 21 DLLRRAYLLSAQMHKGQVRKSGEPYLMHPLAVAYILAEMRLDVICVTTGLLHDVVEDTHV 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVL 349
+ + + + FG +A LV+G++K+S + +RE+ +A+ + M LAM D R VL
Sbjct: 81 TLEELEQQFGPEIAHLVDGLTKISNIEYTSREDR------QAETVRKMLLAMVDDIRVVL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TLD LP KR A+ETL+I+ P+A+RLG+ + +LE+L F++L PD
Sbjct: 135 VKLADRLHNMRTLDYLPPEKRAAKAQETLDIYAPIAHRLGMGKIRGELEDLSFQYLYPDD 194
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ L S L + EA + L++ L + N+ + + GR K LYS++ K+ ++ ++
Sbjct: 195 YQHLKSILDQRRPALEADLAHVRATLQEKLPEHNVKVVEIQGRIKRLYSLYRKLKERAIS 254
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+++D+ +R+I ++ DCY A+ VVH +W +PG+ KD+I P+ N Y
Sbjct: 255 IDQVYDLMAVRVITQDIADCYAAVGVVHNIWKPIPGRFKDWIGIPRNNLY 304
>gi|386289242|ref|ZP_10066377.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [gamma
proteobacterium BDW918]
gi|385277701|gb|EIF41678.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [gamma
proteobacterium BDW918]
Length = 726
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 179/295 (60%), Gaps = 10/295 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+Y AE+AH GQ R SG+PY+ H + A +LA + + + A +LHD ++D ++
Sbjct: 39 VRRAYYYAEQAHEGQNRRSGEPYVTHPLAVASILAEMHMDVQSLMAAMLHDVIEDTHVTK 98
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG VA+LV+GVSKL+++ ++ +A+ M LAMA D R +L+K
Sbjct: 99 QGLSDQFGDVVAELVDGVSKLTRIEFQSKAEQ------QAENFQKMALAMAKDIRVILVK 152
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETLEI+ P+A RLG+ +V+ E+L F ++P +
Sbjct: 153 LADRLHNMRTLGAMPQDKRRRIARETLEIYAPIAQRLGMHNIRVEFEDLGFMSMHPMRAR 212
Query: 412 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+ + F + +T+ E +E L ++ S V+ GR K L+SI+ KM K+ ++
Sbjct: 213 RIRKAITTRFGDRKKTITTIKESIENCLTEEGHSANVI-GREKHLFSIYSKMRNKRKSLK 271
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYIFSQVVL 524
EI D+Y R++V++ + CY+ L VH L+ VPG+ KDYI PK NGY VL
Sbjct: 272 EIMDLYAFRIVVDSVDSCYRVLGCVHSLYKPVPGQFKDYIAIPKANGYQSLHTVL 326
>gi|315640053|ref|ZP_07895178.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
gi|315484181|gb|EFU74652.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
Length = 745
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 173/289 (59%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA A AH GQ R SG+PY++H ++ A +LA + + VA G LHD ++D ++
Sbjct: 35 FVQKALDYATSAHEGQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTDVT 94
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ FG VA LV+GV+KL ++ + E A M +AMA D R +++
Sbjct: 95 LQDLTEEFGPDVAMLVDGVTKLGKIKYKSHEEQLAENH------RKMLIAMAQDLRVIMV 148
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R A+ETL+I+ PLA+RLGIS K +LE+ +++NP Q+
Sbjct: 149 KLADRLHNMRTLKHLREDKQRRIARETLDIYAPLAHRLGISRIKWELEDRSLRYINPQQY 208
Query: 411 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + DE A V +E+L A ++ +I + + GR K +YSI+ KM+ KK
Sbjct: 209 YRIVHLMKTKRDEREAYVDKTVEELRIATEELDI-YAEIYGRPKHIYSIYRKMVDKKKQF 267
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N Y
Sbjct: 268 DEIYDLLAIRVIVDSIKDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMY 316
>gi|411001452|ref|ZP_11377781.1| ppGpp synthetase [Streptomyces globisporus C-1027]
Length = 873
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 157 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 216
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 217 LKRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 268
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 269 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 328
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 329 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 384
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 385 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 433
>gi|407796127|ref|ZP_11143083.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
gi|407019481|gb|EKE32197.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
Length = 733
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 187/309 (60%), Gaps = 14/309 (4%)
Query: 214 AKEFLANAQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGA 271
A+E + A +H + +D F+ KA A AHR Q R SG+PY++H V+ A +L +
Sbjct: 9 AEEVIDGA--RHYLNEDDLQFIRKAHEYAAWAHRDQYRKSGEPYIIHPVQVAGILVNLEL 66
Query: 272 NSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE 331
++ +A+G LHDT++D ++ + + TF VA LV+GV+KL ++ ++E +
Sbjct: 67 DAETIASGFLHDTVEDTGVTVEDLKVTFNEEVAMLVDGVTKLGKIKYKSKEEQ------Q 120
Query: 332 ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGI 390
A+ MF+AMA D R +LIKLADRLHNM TL LP K++R + ETLEIF PLA+RLGI
Sbjct: 121 AENHRKMFVAMAKDLRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGI 180
Query: 391 STWKVQLENLCFKHLNPDQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLC 448
ST K +LE+ ++LNP Q+ + + + +E V I ++ L + NI L
Sbjct: 181 STIKWELEDTALRYLNPQQYYRIVHLMKQKRNEREHYVDEVINQIRGELDNVNIE-ADLD 239
Query: 449 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 508
GR K LYSI+ KM+ + +EI+D+ +R++V + +DCY L ++H W +PG+ KDY
Sbjct: 240 GRPKHLYSIYKKMVLQSKQFNEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDY 299
Query: 509 ITRPKFNGY 517
I PK N Y
Sbjct: 300 IAMPKPNLY 308
>gi|256371735|ref|YP_003109559.1| (p)ppGpp synthetase I SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
gi|256008319|gb|ACU53886.1| (p)ppGpp synthetase I, SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
Length = 721
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 181/298 (60%), Gaps = 12/298 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V+ A A +AH GQ+R SG+PY++H + A +A + A+ VAA LLHDT++D +S
Sbjct: 16 LVLDALALATKAHHGQLRRSGEPYIVHPLAVARRVAELRADPITVAAALLHDTVEDTSIS 75
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + + FGA VA LV+G +KL +LS ++E +A + M +AMA D R ++I
Sbjct: 76 LEELEQRFGAEVAALVDGATKLDRLSFDSKE------VAQAATMRKMLIAMARDVRVLVI 129
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ AL K++R A ET++I+ PLA+RLGI K QLE+ F L+P ++
Sbjct: 130 KLADRLHNMQTIGALGREKQRRIAHETMDIYAPLAHRLGIEEVKWQLEDHAFAVLHPRRY 189
Query: 411 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + + EA + + E+L L I V R K ++SI+ KM+ +
Sbjct: 190 AEMEHLVSQRAPEREARLQAVSEQLAAKLAQVGIVAEV-TARPKHVWSIYEKMVLRGKEF 248
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY--IFSQVVL 524
D I+DI G+R+I E DC+ AL V+H LWA +PG+ KDYI PKFN Y + + VVL
Sbjct: 249 DAIYDILGVRIITHEERDCWAALGVIHSLWAPIPGRFKDYINAPKFNLYQSLHTTVVL 306
>gi|149913463|ref|ZP_01901996.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Roseobacter sp. AzwK-3b]
gi|149812583|gb|EDM72412.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Roseobacter sp. AzwK-3b]
Length = 713
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 173/292 (59%), Gaps = 11/292 (3%)
Query: 230 EDFVIKAFYEAERA-HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
++ +I+A Y+ RA H GQ R SG+PY H V A +LA + + LLHDT++D
Sbjct: 19 DEALIRAAYDYGRAMHEGQFRHSGEPYFTHPVAVAAILAEQRLDDATIITALLHDTIEDT 78
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
SY+ + FG VADLV+GV+KL+ L ++S+T +A+ +F+AM+ D R
Sbjct: 79 RASYNEVAERFGGEVADLVDGVTKLTNLQL------SSSETKQAENFRKLFMAMSKDLRV 132
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM T+ A+ K+ + A+ET++IF PLA R+G+ + +LE+L F+ LNP
Sbjct: 133 ILVKLADRLHNMRTIKAMRPEKQAQKARETMDIFAPLAGRMGMQWMREELEDLAFRVLNP 192
Query: 408 DQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
D + + + E +V + L+ + V GR K YSI KM +K+
Sbjct: 193 DARASIIRRFITLQKETGDVVERITGDMRLELRKAKLEAEVF-GRAKKPYSIWRKMQEKE 251
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ + DIYG R+I +EEDCY L +H+ W VPG+ KDYI++PK NGY
Sbjct: 252 MGFSRLSDIYGFRIITGSEEDCYAVLGAIHRRWRAVPGRFKDYISQPKSNGY 303
>gi|401678143|ref|ZP_10810111.1| bifunctional (p)ppGpp synthase/hydrolase SpoT [Enterobacter sp.
SST3]
gi|400214511|gb|EJO45429.1| bifunctional (p)ppGpp synthase/hydrolase SpoT [Enterobacter sp.
SST3]
Length = 704
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 169/286 (59%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA+LVEGVSKL +L N K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKL------NFRDKKEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV + + CY+ L +H L+ PG+MKDYI PK NGY
Sbjct: 258 MDIYAFRVIVHDSDTCYRVLGQMHSLYKPRPGRMKDYIAIPKANGY 303
>gi|115525032|ref|YP_781943.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris BisA53]
gi|115518979|gb|ABJ06963.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris
BisA53]
Length = 759
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 173/291 (59%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 53 EDLLNRAYVYAMMAHGDQTRASGDPYFSHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 112
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I + FG + LVEG++KL +L ++RE +A+ L + LA++D R +
Sbjct: 113 ATRTEIDKIFGHEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAISDDVRVL 166
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL+ +P RQR A+ETL+I+ PLA R+G+ + +LE+ F+ +NPD
Sbjct: 167 LIKLADRLHNMRTLEFVPPASRQRIAEETLDIYAPLAGRMGMHEMREELEDQSFRTINPD 226
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L D ++ +L L+ I V GR K +SI KM +K +
Sbjct: 227 AYAVVTQRLDALADRNRNLIGEIESQLSANLQQNGIDARV-YGRRKRPFSIWNKMERKSV 285
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DIYG R+I+++ E CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 286 GFEQLSDIYGFRVILQDVEACYRALGVVHTTWPVVPGRFKDYISTPKQNDY 336
>gi|260101667|ref|ZP_05751904.1| GTP diphosphokinase [Lactobacillus helveticus DSM 20075]
gi|260084527|gb|EEW68647.1| GTP diphosphokinase [Lactobacillus helveticus DSM 20075]
Length = 746
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 172/293 (58%), Gaps = 18/293 (6%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV KA+ A +AH GQ RASG PY++H + A LA +G + + AG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG V +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVTFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++ + ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRWISSETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 411 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGY
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGY 308
>gi|39935759|ref|NP_948035.1| GTP pyrophosphokinase [Rhodopseudomonas palustris CGA009]
gi|192291346|ref|YP_001991951.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris TIE-1]
gi|39649612|emb|CAE28134.1| GTP pyrophosphokinase [Rhodopseudomonas palustris CGA009]
gi|192285095|gb|ACF01476.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris TIE-1]
Length = 760
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 173/291 (59%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 54 EDLLNRAYVYAMMAHGEQTRASGDPYFSHPLEVAAILTNLKLDDATIVAALLHDTIEDTE 113
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L ++RE +A+ L + LA+AD R +
Sbjct: 114 ATRTEIDTMFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 167
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL+ +P RQR A+ETL+I+ PLA R+G+ + +LE+L F+ L+P+
Sbjct: 168 LIKLADRLHNMRTLEFVPPASRQRIAEETLDIYAPLAGRMGMQEMREELEDLSFRSLDPE 227
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
T + +L + + ++ +L L I+ V GR K +SI KM +K +
Sbjct: 228 AFTVVMQRLDALAERNRNLIGEIESQLSANLARHGITAEV-TGRRKRPFSIWTKMERKSV 286
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DIYG R++++N E CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 287 GFEQLSDIYGFRVVLDNVEACYRALGVVHTTWPMVPGRFKDYISTPKQNDY 337
>gi|330838608|ref|YP_004413188.1| (p)ppGpp synthetase I, SpoT/RelA [Selenomonas sputigena ATCC 35185]
gi|329746372|gb|AEB99728.1| (p)ppGpp synthetase I, SpoT/RelA [Selenomonas sputigena ATCC 35185]
Length = 740
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ A+ AH+GQ R SG+ Y++H + A +L + + ++A +LHD ++D
Sbjct: 26 DLIRRAYELADAAHKGQKRVSGEDYIIHPLAVAKILTDLQIDDITISAAILHDVVEDTTH 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA L++GV+KL ++ ++E + + MFLAMA D R ++
Sbjct: 86 TLDEMRELFGDEVAMLIDGVTKLGRIQYKSKEEQ------QLESYRKMFLAMAKDIRVIM 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++R A+ET+EI+ PLANRLGIS K +LE+LC ++L+P
Sbjct: 140 IKLADRLHNMRTLKYMREDKQKRIARETIEIYAPLANRLGISNVKWELEDLCLRYLDPKA 199
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E A + A E++ + L++ +I+ + GR K YSI+ KM + +
Sbjct: 200 YYDLVESVKQKRQERQAFIDEAHEQIVEKLEEAHITAEI-QGRAKHFYSIYKKMKRDQKD 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ LR++V++ +DCY L ++H +W +PG+ KDYI PK NGY
Sbjct: 259 ISEIYDLSALRVLVDSVKDCYGVLGIIHAMWKPLPGRFKDYIAMPKSNGY 308
>gi|229828401|ref|ZP_04454470.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
14600]
gi|229792995|gb|EEP29109.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
14600]
Length = 790
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 186/310 (60%), Gaps = 9/310 (2%)
Query: 211 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 270
E +E +A H + KA+ A +AH+ Q R SG+PY++H + A++LA +
Sbjct: 38 EVIYRELVARINRYHPNTDISMIEKAYGIARQAHKDQKRKSGEPYIIHPLSVALILADLE 97
Query: 271 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 330
+ + GLLHD ++D +S D + R F +A LV+GV+KL QLS + +
Sbjct: 98 LDKETIVGGLLHDVVEDTVMSLDDVRREFSDEIALLVDGVTKLGQLSY-----DADKVEI 152
Query: 331 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 389
+A+ L MFLAM+ D R +LIKLADRLHNM TL + K++ A+ET+EI+ PLA RLG
Sbjct: 153 QAENLRKMFLAMSKDIRVLLIKLADRLHNMRTLKFMTPAKQKEKARETMEIYAPLAQRLG 212
Query: 390 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVL 447
IS KV+L++L K L PD + +L +L + E + S + + + + I +
Sbjct: 213 ISKVKVELDDLALKFLEPDAYYDLLEQLNQRESERSEYIQSLADLVTRQIDAAGIKAKIY 272
Query: 448 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 507
GR K L+SI+ KM+ + T+D+I+D++ +R+IV++ +DCY +L ++H+ + +PG+ KD
Sbjct: 273 -GRAKHLFSIYKKMVNQHKTLDQIYDLFAVRIIVDDLKDCYASLGIIHEHYTPIPGRFKD 331
Query: 508 YITRPKFNGY 517
YI PK N Y
Sbjct: 332 YIAMPKPNMY 341
>gi|414072707|ref|ZP_11408634.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. Bsw20308]
gi|410804868|gb|EKS10906.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudoalteromonas sp. Bsw20308]
Length = 701
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 173/290 (59%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V K++ A AH GQ R+SG+PY+ H VE +LA + + + A L+HD ++D
Sbjct: 21 ELVQKSYVVAREAHEGQTRSSGEPYITHPVEVTQILAGMHLDHETLMAALMHDVIEDTDF 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S + FG VA+LVEGVSKL +LS K +A+ M +AM D R +L
Sbjct: 81 SQQDLAEIFGETVAELVEGVSKLDKLS------FKDKKEFQAENYRKMIMAMTQDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADR HNM TL AL KR+R A+ETL+I+ P+ANRLGI K +LE+L F+ L P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIARETLDIYAPIANRLGIHDIKNELEDLGFQALYPMR 194
Query: 410 HTELSSKLVECF-DEAMVTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
H L S++ + + V S I+ ++E L++ I V GR K LYSI+ KML K+L
Sbjct: 195 HRALKSEVAKARGNRKEVISNIQNEIEARLEESGIKATV-SGREKHLYSIYKKMLNKELL 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+E+ DIY R+ V++ + CY+ L V H L+ + + KDYI PK NGY
Sbjct: 254 FNEVMDIYAFRIAVDSMDTCYRVLGVAHSLYKPIETRFKDYIAVPKTNGY 303
>gi|29833382|ref|NP_828016.1| ppGpp synthetase [Streptomyces avermitilis MA-4680]
gi|29610505|dbj|BAC74551.1| putative ppGpp synthetase [Streptomyces avermitilis MA-4680]
Length = 845
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 126 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 185
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 186 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 237
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 238 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 297
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 298 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 353
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 354 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 402
>gi|365883079|ref|ZP_09422259.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 375]
gi|365288511|emb|CCD94790.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 375]
Length = 765
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 174/291 (59%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 57 EDLLNRAYVYAMKAHGSQTRASGDPYFTHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 116
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I R FG + LVEG++KL +L ++RE +A+ L + LA+A D R +
Sbjct: 117 ATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 170
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL+ +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P
Sbjct: 171 LVKLADRLHNMRTLEFVPEASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPQ 230
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + +L D ++ +L + +D ++ V GR K +SI KM +K +
Sbjct: 231 AYGVVMQRLDALADRNRNLIGEIESQLARKFRDHGLTARVF-GRRKRPFSIWTKMERKSI 289
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+I+ + E CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 290 GFEQLSDIFGFRVIMPDLESCYRALGIVHTTWPVVPGRFKDYISTPKQNDY 340
>gi|159184586|ref|NP_354053.2| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Agrobacterium fabrum str. C58]
gi|159139888|gb|AAK86838.2| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Agrobacterium fabrum str. C58]
Length = 744
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 180/293 (61%), Gaps = 13/293 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RA+GDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRANGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L + R K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKLKKLDLVTR------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ +P KR R ++ET+EI+ PLA R+G+ + +LE+L F++LNP+
Sbjct: 134 LVKLADRLHNMRTMEYMPADKRSRISEETMEIYAPLAGRMGMQDMRDELEDLSFRYLNPE 193
Query: 409 QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLC----GRHKSLYSIHCKMLKK 464
+ ++++L+E E I+K+E L++ ++ +L GR K YS+ KM K
Sbjct: 194 AYETVTNRLLEL--ETRNEGLIKKIEDELRELLVANGLLGTHVKGRQKKPYSVFRKMQSK 251
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L+ +++ D+YG R++V++ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 252 SLSFEQLSDVYGFRILVDDIPGCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|410449683|ref|ZP_11303736.1| putative GTP diphosphokinase [Leptospira sp. Fiocruz LV3954]
gi|418743759|ref|ZP_13300118.1| putative GTP diphosphokinase [Leptospira santarosai str. CBC379]
gi|418751581|ref|ZP_13307865.1| putative GTP diphosphokinase [Leptospira santarosai str. MOR084]
gi|409968054|gb|EKO35867.1| putative GTP diphosphokinase [Leptospira santarosai str. MOR084]
gi|410016440|gb|EKO78519.1| putative GTP diphosphokinase [Leptospira sp. Fiocruz LV3954]
gi|410795154|gb|EKR93051.1| putative GTP diphosphokinase [Leptospira santarosai str. CBC379]
gi|456874475|gb|EMF89768.1| putative GTP diphosphokinase [Leptospira santarosai str. ST188]
Length = 674
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V+KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VLKAYNVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLY 309
>gi|423062390|ref|ZP_17051180.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
gi|406716298|gb|EKD11449.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
Length = 741
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 177/290 (61%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H+GQ R SG+PY+ H + A +L +G+++ +VAAG LHD ++D +
Sbjct: 20 DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDV 79
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG V LVEGV+KLS+ + +NT + +A+ MFLAMA D R ++
Sbjct: 80 TPEELESHFGPEVRHLVEGVTKLSKFNF----SNTTER--QAENFRRMFLAMAQDIRVIV 133
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ + K++ A ET EIF PLANRLGI K +LE+L FK++ P+
Sbjct: 134 VKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEA 193
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ ++ + E + + + L ++ I + GR K LY I+ KM ++
Sbjct: 194 YREIQIRVADRRATREEKLAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQ 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI LRLIVE E+CY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 254 FHEIYDIAALRLIVETNEECYRALAIVHDSYRPIPGRFKDYIGLPKPNRY 303
>gi|170079402|ref|YP_001736040.1| GTP pyrophosphokinase [Synechococcus sp. PCC 7002]
gi|169887071|gb|ACB00785.1| GTP pyrophosphokinase/ RelA/SpoT family protein [Synechococcus sp.
PCC 7002]
Length = 755
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/287 (43%), Positives = 175/287 (60%), Gaps = 11/287 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+AF A H GQ R SG+PY+ H + A LL +G N ++AAG LHD ++D +S +
Sbjct: 48 EAFRFAHALHEGQTRKSGEPYIAHPIAVAGLLLDLGGNGAMIAAGFLHDVVEDTEVSPEE 107
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKL 352
I FGA LVEGV+KL++ + +SKT +A+ MFL+MA D R +++KL
Sbjct: 108 IEERFGAETRKLVEGVTKLTKFT-------FSSKTERQAENFRRMFLSMAEDIRVIVVKL 160
Query: 353 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 412
ADRLHNM TL+ L K++R A ET EIF PLANRLGI +K +LE+LCFK+L + +
Sbjct: 161 ADRLHNMRTLEHLRPDKQERIALETREIFAPLANRLGIWRFKWELEDLCFKYLEREAYRS 220
Query: 413 LSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
+ + E EA + AIE + L+ + + GR K LYSI+ KM ++ DE
Sbjct: 221 MQKHISEKRTEREAKLEEAIEIIRDRLRHLGLHVWEIKGRPKHLYSIYHKMQRQHKEFDE 280
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I DI G+R+IVE ++CY+AL V+H + +PG+ KDYI PK N Y
Sbjct: 281 IFDIAGIRIIVETNDECYRALAVIHDAFKPIPGRFKDYIGLPKPNRY 327
>gi|442321697|ref|YP_007361718.1| GTP pyrophosphokinase [Myxococcus stipitatus DSM 14675]
gi|441489339|gb|AGC46034.1| GTP pyrophosphokinase [Myxococcus stipitatus DSM 14675]
Length = 737
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 176/290 (60%), Gaps = 7/290 (2%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ + + H+GQ+R SG+PYL+H +E A +LA + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILADLKLDEASIVTGLLHDTIEDTLA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGSEVAQLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 138 VKLADRTHNMRTLDHMNEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 197
Query: 410 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
L KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 198 FFGLQEKLNKRKKEREKYIEDTCDLIRSKLAERGLKGEV-SGRFKHVYSIYKKIKAQGID 256
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N Y
Sbjct: 257 FDQIHDIIAFRIIAPAAPACYEALGLVHEMWKPVPGRFKDFIAIPKPNMY 306
>gi|365157987|ref|ZP_09354230.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
gi|363622166|gb|EHL73337.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
Length = 730
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 171/288 (59%), Gaps = 8/288 (2%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA+ AE AH+ Q R SG+PY++H V+ A +LA + + VAAG LHD ++D ++
Sbjct: 27 LVYKAYRVAEEAHKHQYRKSGEPYIMHPVQVAGILADLEMDPATVAAGFLHDVVEDTEMT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + R F +A LV+GV+KL ++ + E +A+ MFLAMA D R +LI
Sbjct: 87 LEDLKREFNEEIAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV-LCGRHKSLYSIHCKMLKKKLTMD 469
+ + + E E + K +S + GR K +YSI+ KM+ K +
Sbjct: 201 YRIVNLMKRKRAEREEYLEEVVEEVRERLKEVSIEAEISGRPKHIYSIYRKMVIKNKQFN 260
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 261 EIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|294811578|ref|ZP_06770221.1| Putative ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294324177|gb|EFG05820.1| Putative ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 862
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 148 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 207
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 208 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 259
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 260 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 319
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 320 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 375
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 376 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 424
>gi|420198789|ref|ZP_14704475.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM031]
gi|394272970|gb|EJE17413.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM031]
Length = 729
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K E+ +T+AI K++ + ++S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSERESYITNAINKIKNEMTKMSLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|390559275|ref|ZP_10243626.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
gi|390174152|emb|CCF82919.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
Length = 721
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 180/291 (61%), Gaps = 8/291 (2%)
Query: 233 VIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V+K ++ A AH G+ R SG+PY+ H VE A++LA + + +AA LLHD ++D +
Sbjct: 16 VVKQAHDFARDAHEGKFRRSGEPYISHPVEVAIILAEMQLDQETLAAALLHDVVEDTDTT 75
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTA--SKTVEADRLHTMFLAMAD-ARAV 348
+ + FG + LV+GV+KL ++ + A E + A K +A+ L MFLAM D R V
Sbjct: 76 MEDLRTLFGDRIVRLVDGVTKLGRI-RWAAETDHAVREKERQAESLRKMFLAMVDDVRVV 134
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TL+ +P K+ R AKET+EI+ PLANRLGI K +LE+L ++++P
Sbjct: 135 LIKLADRLHNMRTLEHMPRAKQLRSAKETMEIYAPLANRLGIWQIKSELEDLALRYVDPQ 194
Query: 409 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + L + + S I +L + L+D I + GR K + SI KM +K+
Sbjct: 195 TYFTIERALERRGTDRDQYLESVIAELSRTLEDAGIGAEI-SGREKHITSIARKMERKER 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ DEI+D+ G+R+IV+ ++DCY AL V+H +W +PG+ DY+ PK + Y
Sbjct: 254 SFDEIYDVLGIRVIVDEKKDCYGALGVIHSIWHPIPGEFDDYVATPKESMY 304
>gi|332528407|ref|ZP_08404399.1| (p)ppGpp synthetase I, SpoT/RelA [Hylemonella gracilis ATCC 19624]
gi|332042086|gb|EGI78420.1| (p)ppGpp synthetase I, SpoT/RelA [Hylemonella gracilis ATCC 19624]
Length = 710
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 172/288 (59%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A+ AH GQ+R SG+PY+ H + A L A ++ + A LLHD ++D ++
Sbjct: 5 VRQAYRFADEAHLGQLRNSGEPYITHPIAVAGLCAEWKLDAQALMAALLHDAIEDCGVTK 64
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G++KL +L RE N +A+ M LAMA D R +LIK
Sbjct: 65 PELIERFGAPVAELVDGLTKLDKLQFSTREEN------QAESFRKMLLAMARDVRVILIK 118
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADR HNM TL +P K R + ETLEI+ P+A RLG++ +L+ L F HL P +H
Sbjct: 119 LADRSHNMRTLSDVPRSKWARISSETLEIYAPIAYRLGLNQTYRELQELSFSHLRPWRHA 178
Query: 412 ELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
LS L ++ +++E A + +I + L GR K+LYSI+ KM +K L+
Sbjct: 179 VLSKALERARSRRRDLIGKVQKEVEAAFEAAHIP-VRLAGREKTLYSIYKKMDEKHLSFA 237
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I D+YG R+IV + DCY AL V+HQL+ VPGK KD I PK NGY
Sbjct: 238 QISDMYGFRVIVPSLADCYTALGVLHQLYKPVPGKFKDLIAIPKANGY 285
>gi|260887825|ref|ZP_05899088.1| GTP diphosphokinase [Selenomonas sputigena ATCC 35185]
gi|260862431|gb|EEX76931.1| GTP diphosphokinase [Selenomonas sputigena ATCC 35185]
Length = 749
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ A+ AH+GQ R SG+ Y++H + A +L + + ++A +LHD ++D
Sbjct: 35 DLIRRAYELADAAHKGQKRVSGEDYIIHPLAVAKILTDLQIDDITISAAILHDVVEDTTH 94
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA L++GV+KL ++ ++E + + MFLAMA D R ++
Sbjct: 95 TLDEMRELFGDEVAMLIDGVTKLGRIQYKSKEEQ------QLESYRKMFLAMAKDIRVIM 148
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++R A+ET+EI+ PLANRLGIS K +LE+LC ++L+P
Sbjct: 149 IKLADRLHNMRTLKYMREDKQKRIARETIEIYAPLANRLGISNVKWELEDLCLRYLDPKA 208
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E A + A E++ + L++ +I+ + GR K YSI+ KM + +
Sbjct: 209 YYDLVESVKQKRQERQAFIDEAHEQIVEKLEEAHITAEI-QGRAKHFYSIYKKMKRDQKD 267
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ LR++V++ +DCY L ++H +W +PG+ KDYI PK NGY
Sbjct: 268 ISEIYDLSALRVLVDSVKDCYGVLGIIHAMWKPLPGRFKDYIAMPKSNGY 317
>gi|239986442|ref|ZP_04707106.1| putative ppGpp synthetase [Streptomyces roseosporus NRRL 11379]
Length = 818
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 102 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 161
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 162 LKRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 213
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 214 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 273
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 274 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIKA----TVTGRPKHYYSVYQKMIVRGRDF 329
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 330 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 378
>gi|373494894|ref|ZP_09585491.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
gi|371967256|gb|EHO84728.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
Length = 733
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 186/311 (59%), Gaps = 11/311 (3%)
Query: 210 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 269
+ET A +FL + + + + + AF A + H GQ+R SG+PY +H + A++LA +
Sbjct: 1 METKA-QFLEELKKYNDNYNPEVIGAAFDMAHKLHEGQLRKSGEPYFIHPIAVAIILAQL 59
Query: 270 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 329
G + + GLLHD ++D + + + FG VA LV+GV+KL + +E
Sbjct: 60 GMDEATIVGGLLHDVVEDTEYTREMLVNDFGEEVAVLVDGVTKLGSIKFDTKEE------ 113
Query: 330 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 388
+A+ L MF AM+ D R ++IKLADRLHNM T + K++ ++ETL+I+ PLA+RL
Sbjct: 114 AQAENLRKMFFAMSKDIRVLIIKLADRLHNMRTAEYWSESKQKEKSRETLDIYAPLASRL 173
Query: 389 GISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLV 446
GI T K +LE+ K+L+P ++ L ++ E + E ++ S IE++ L+ N+ F +
Sbjct: 174 GIFTVKFELEDTALKYLHPQEYETLKREVSEKREQREKVINSVIERISTNLEQLNLHFDI 233
Query: 447 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 506
GR K LYSI+ KM+ + +DEI D+ +R+IV++ +DCY L +VH +W +P + K
Sbjct: 234 -SGRSKHLYSIYKKMVLQNKQLDEIFDLTAVRVIVDSVKDCYAVLGLVHTMWKPIPRRFK 292
Query: 507 DYITRPKFNGY 517
DYI PK N Y
Sbjct: 293 DYIAMPKPNMY 303
>gi|359685240|ref|ZP_09255241.1| GTP pyrophosphokinase [Leptospira santarosai str. 2000030832]
Length = 674
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V+KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VLKAYNVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLY 309
>gi|262199001|ref|YP_003270210.1| (p)ppGpp synthetase I SpoT/RelA [Haliangium ochraceum DSM 14365]
gi|262082348|gb|ACY18317.1| (p)ppGpp synthetase I, SpoT/RelA [Haliangium ochraceum DSM 14365]
Length = 728
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 168/289 (58%), Gaps = 8/289 (2%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + +A+ A AH GQ R SGDPY+ H + A ++A + + + A LLHD ++D
Sbjct: 21 ELIRRAYEYAAEAHEGQTRRSGDPYVTHPLSVAGIVADLRLDGATICAALLHDAVEDTSA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I FG VA LV+GV+KL +L +RE +A+ M LAMA D R +L
Sbjct: 81 TIEDITSMFGKEVAFLVDGVTKLGKLPYTSREER------QAENFRKMLLAMARDIRVIL 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+K DRL NM TLD LP K++R A ETL+I+ PLA+R+GI K +LE+L FK+L ++
Sbjct: 135 LKFCDRLDNMRTLDHLPSEKQERIASETLQIYAPLAHRIGIQWIKTELEDLSFKYLYREE 194
Query: 410 HTELSSKLVECFDEA-MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ +L+ + + E +E+L KN + GR K L+SI KM + K
Sbjct: 195 YDDLAGDVAKTRKERNRYIVDVERLIYKEMAKNSVRCKVTGRAKHLWSIRQKMQRTKRPY 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EIHD G R++ EN+ CY+AL VVH W +PG+ KDYI PK NGY
Sbjct: 255 NEIHDAIGFRVVTENQRGCYEALGVVHAAWTPIPGRFKDYIALPKPNGY 303
>gi|444376910|ref|ZP_21176148.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Enterovibrio sp. AK16]
gi|443679035|gb|ELT85697.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Enterovibrio sp. AK16]
Length = 702
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 174/286 (60%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY++H + A +LA + + + A LLHD ++D ++ +
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYIIHPIAVARILAEMRLDHETLMAALLHDVIEDTDVTKED 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VADLV+GVSKL +L R+ +A+ M +AMA D R +LIKLA
Sbjct: 85 LQQRFGDTVADLVDGVSKLDKLKFRDRQE------AQAENFRKMIMAMAHDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL AL KR+R A+ETLEIF PLA+RLGI KV+LE L F+ L P ++ L
Sbjct: 139 DRTHNMRTLGALRPDKRRRIARETLEIFSPLAHRLGIHNIKVELEELGFEALYPTRYRVL 198
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + M+ ++E L+D I+ VL GR K+LYSI+ KM K+ I
Sbjct: 199 REVVIHARGNRKEMIQKIHAEIEGRLQDAGINAKVL-GREKNLYSIYNKMKNKEQRFHTI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+Y R+IV++ + CY+ L +H L+ PG+MKDYI PK NGY
Sbjct: 258 MDLYAFRVIVDSVDTCYRVLGQMHNLYKPRPGRMKDYIAVPKANGY 303
>gi|291443389|ref|ZP_06582779.1| ppGpp synthetase [Streptomyces roseosporus NRRL 15998]
gi|291346336|gb|EFE73240.1| ppGpp synthetase [Streptomyces roseosporus NRRL 15998]
Length = 818
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 102 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 161
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 162 LKRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 213
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 214 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 273
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 274 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIKA----TVTGRPKHYYSVYQKMIVRGRDF 329
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 330 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 378
>gi|209522975|ref|ZP_03271532.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
gi|209496562|gb|EDZ96860.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
Length = 764
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 177/290 (61%), Gaps = 9/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF A + H+GQ R SG+PY+ H + A +L +G+++ +VAAG LHD ++D +
Sbjct: 43 DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDV 102
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG V LVEGV+KLS+ + +NT + +A+ MFLAMA D R ++
Sbjct: 103 TPEELESHFGPEVRHLVEGVTKLSKFNF----SNTTER--QAENFRRMFLAMAQDIRVIV 156
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL+ + K++ A ET EIF PLANRLGI K +LE+L FK++ P+
Sbjct: 157 VKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEA 216
Query: 410 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ E+ ++ + E + + + L ++ I + GR K LY I+ KM ++
Sbjct: 217 YREIQIRVADRRATREEKLAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQ 276
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+DI LRLIVE E+CY+AL +VH + +PG+ KDYI PK N Y
Sbjct: 277 FHEIYDIAALRLIVETNEECYRALAIVHDSYRPIPGRFKDYIGLPKPNRY 326
>gi|86357023|ref|YP_468915.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase [Rhizobium
etli CFN 42]
gi|86281125|gb|ABC90188.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Rhizobium etli CFN 42]
Length = 744
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|386074939|ref|YP_005989257.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. IPAV]
gi|353458729|gb|AER03274.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. IPAV]
Length = 674
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW PG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPAPGRFKDYIATPKTNMY 309
>gi|227484948|ref|ZP_03915264.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
gi|227237103|gb|EEI87118.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
Length = 726
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + KA+ H GQ R SG+ Y +H + A L+ + + + AGL+HD L+D +
Sbjct: 26 DLIKKAYDFGVLHHNGQKRNSGEDYFIHPIAVASNLSDMKLDDETICAGLMHDVLEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG + LV+GV+KL + N T+ + +A+ + M +AMA D R VL
Sbjct: 86 TRDEMKAEFGEEITFLVDGVTKLKNI------NYTSKEEKQAENIRKMVMAMANDVRVVL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL+ + K+ + A ET+EI+VPLA+RLGI + K +LE+LCF++ P++
Sbjct: 140 IKLADRLHNMRTLEYMTREKQLQKANETIEIYVPLAHRLGIYSLKWELEDLCFRYQEPEK 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ EL+ + E + I+ L +AL NI+F + GR KSLYSI+ KM + K+
Sbjct: 200 YYELAEMVNVKRRERENYINEIIDTLTKALDSTNINFEI-SGRPKSLYSINKKMERNKIA 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V+ +CY L VH LW +P ++KDYI +PK NGY
Sbjct: 259 FEEIYDLTAIRVLVDTIAECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGY 308
>gi|339017988|ref|ZP_08644132.1| GTP pyrophosphokinase [Acetobacter tropicalis NBRC 101654]
gi|338752877|dbj|GAA07436.1| GTP pyrophosphokinase [Acetobacter tropicalis NBRC 101654]
Length = 787
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 199/355 (56%), Gaps = 25/355 (7%)
Query: 183 AVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAER 242
AV+ GS+ A + E N ++ L +E+ A + D + +AF A++
Sbjct: 28 AVVKDGSAVAAVPEK--NGRGDVNCERLVNVVREYAPAADV-------DLIRRAFAVAKK 78
Query: 243 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 302
AH GQ+R +GDPY+ H + AM+LA + + GLLHDT++D ++ D + FG
Sbjct: 79 AHEGQLRDNGDPYITHPLAVAMILAGFRLDVPSILTGLLHDTIEDTGVTQDDLRTQFGDT 138
Query: 303 VADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 361
VADLV+GV+KL++L + +T +A+ + LAM+ D R +L+KLADRLHNM T
Sbjct: 139 VADLVDGVTKLTRLEL------QSDRTKQAENFRKLVLAMSKDIRVLLVKLADRLHNMRT 192
Query: 362 LDALP-LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC 420
L + + +RQR A+ETL+I+ PLA R+G+ K +L+NL F L P+ + ++L
Sbjct: 193 LHFVERVDRRQRIARETLDIYAPLAERIGMDRVKTELQNLSFAQLEPEADVTIRARL--N 250
Query: 421 FDEAMVTSAIEKLEQAL----KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 476
+ IE++ + L + + + + GR KS YSI KM ++ + +++ DI
Sbjct: 251 YLRGQGADVIEEVRRELLRLCHEAGLKNVHVSGREKSPYSIWEKMQRRNVAFEQLSDIMA 310
Query: 477 LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY--IFSQVVLSYERN 529
R+IVE EDCY AL VH + + G+ KDYI+ PK NGY + + V L RN
Sbjct: 311 FRVIVETREDCYMALGAVHAAYPVIAGRFKDYISTPKANGYQSLHTGVTLRSPRN 365
>gi|336421845|ref|ZP_08602000.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009694|gb|EGN39685.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 781
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 187/289 (64%), Gaps = 9/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A++AH GQ R SG+PY++H + A++LA + + + +G+LHD ++D +S
Sbjct: 66 MIEKAYQLAKKAHGGQCRKSGEPYIVHPLWVAIILADLEMDKETIVSGMLHDVVEDTEVS 125
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I R FG VA LV+GV+KL +LS ++ V+A+ L MFLAMA D R ++I
Sbjct: 126 EEDIKREFGEEVALLVDGVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIII 180
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL+ + K++ AKET++I+ P+A RLGIS K +L++L K+ P+
Sbjct: 181 KLADRLHNMRTLEFMTPAKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVF 240
Query: 411 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+L +++ + E V ++++ +K+ +I V GR K +SI+ KM+ + T+
Sbjct: 241 FDLVNQINARKTEREEFVQQIVDEVSTHMKNASIKADV-NGRVKHFFSIYKKMVNQDKTV 299
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+++D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N Y
Sbjct: 300 DQVYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMY 348
>gi|296100482|ref|YP_003610628.1| hypothetical protein ECL_00111 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|392976993|ref|YP_006475581.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Enterobacter
cloacae subsp. dissolvens SDM]
gi|295054941|gb|ADF59679.1| conserved hypothetical protein [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|392322926|gb|AFM57879.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 704
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 169/286 (59%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA+LVEGVSKL +L N K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKL------NFRDKKEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV + + CY+ L +H L+ PG+MKDYI PK NGY
Sbjct: 258 MDIYAFRVIVHDADTCYRVLGQMHSLYKPRPGRMKDYIAIPKANGY 303
>gi|190891068|ref|YP_001977610.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Rhizobium
etli CIAT 652]
gi|190696347|gb|ACE90432.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase protein
[Rhizobium etli CIAT 652]
Length = 744
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSRRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|402833070|ref|ZP_10881692.1| GTP diphosphokinase [Selenomonas sp. CM52]
gi|402281437|gb|EJU30072.1| GTP diphosphokinase [Selenomonas sp. CM52]
Length = 740
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ A+ AH+GQ R SG+ Y++H + A +L + + ++A +LHD ++D
Sbjct: 26 DLIRRAYELADAAHKGQKRVSGEDYIIHPLAVAKILTDLQIDDITISAAILHDVVEDTTH 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ D + FG VA L++GV+KL ++ ++E + + MFLAMA D R ++
Sbjct: 86 TLDEMRELFGDEVAMLIDGVTKLGRIQYKSKEEQ------QLESYRKMFLAMAKDIRVIM 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL + K++R A+ET+EI+ PLANRLGIS K +LE+LC ++L+P
Sbjct: 140 IKLADRLHNMRTLKYMREDKQKRIARETIEIYAPLANRLGISNVKWELEDLCLRYLDPKA 199
Query: 410 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L + + E A + A E++ + L++ +I+ + GR K YSI+ KM + +
Sbjct: 200 YYDLVESVKQKRQERQAFIDEAHEQIVEKLEEAHITAEIR-GRAKHFYSIYKKMKRDQKD 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ LR++V++ +DCY L ++H +W +PG+ KDYI PK NGY
Sbjct: 259 ISEIYDLSALRVLVDSVKDCYGVLGIIHAMWKPLPGRFKDYIAMPKSNGY 308
>gi|429762033|ref|ZP_19294440.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
gi|429182579|gb|EKY23677.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
Length = 765
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 183/288 (63%), Gaps = 9/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A +AH Q R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 48 VERAYKVAYKAHEKQKRKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTH 107
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +LIK
Sbjct: 108 EDIVRDFGEEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIK 162
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD +
Sbjct: 163 LADRLHNMRTMQFMRPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYE 222
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+L L + EA + +++++ + I + GR K ++SI+ KM+ + T+D
Sbjct: 223 DLERSLDSAKEEREAFIQEIVDEVKGHIDRAGIKAEI-DGRVKHMFSIYKKMVNQHKTID 281
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D++ +R+ V+ +DCY AL ++H+++ +PG+ KDYI PK N Y
Sbjct: 282 QIYDLFAVRIKVDTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMY 329
>gi|421739510|ref|ZP_16177818.1| (p)ppGpp synthetase, RelA/SpoT family [Streptomyces sp. SM8]
gi|406692146|gb|EKC95859.1| (p)ppGpp synthetase, RelA/SpoT family [Streptomyces sp. SM8]
Length = 836
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 122 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 181
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 182 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 233
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 234 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 293
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 294 VRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 349
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 350 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 398
>gi|408676832|ref|YP_006876659.1| GTP pyrophosphokinase , (p)ppGpp synthetase I, partial
[Streptomyces venezuelae ATCC 10712]
gi|328881161|emb|CCA54400.1| GTP pyrophosphokinase , (p)ppGpp synthetase I, partial
[Streptomyces venezuelae ATCC 10712]
Length = 846
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 174/291 (59%), Gaps = 18/291 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D
Sbjct: 130 VERAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGL 189
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
D + R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IK
Sbjct: 190 DTLRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIK 241
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 242 LADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYD 301
Query: 412 ELSSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
E+ + E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 302 EIVRLVAERAPKRDEYLAIVTDEVQADLRAARIKA----TVTGRPKHYYSVYQKMIVRGR 357
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 358 DFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 408
>gi|254391321|ref|ZP_05006525.1| GTP pyrophosphokinase [Streptomyces clavuligerus ATCC 27064]
gi|326440038|ref|ZP_08214772.1| ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
gi|150170983|emb|CAL64065.1| ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197705012|gb|EDY50824.1| GTP pyrophosphokinase [Streptomyces clavuligerus ATCC 27064]
Length = 845
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 131 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 190
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 191 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 242
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 243 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 302
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 303 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 358
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 359 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 407
>gi|441162933|ref|ZP_20968190.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440616458|gb|ELQ79597.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 838
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 174/291 (59%), Gaps = 18/291 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D
Sbjct: 122 VERAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGL 181
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
D + R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IK
Sbjct: 182 DTLRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIK 233
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 234 LADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYD 293
Query: 412 ELSSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
E+ + E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 294 EIVRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGR 349
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 350 DFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 400
>gi|66864711|gb|AAY57436.1| RelA [Rhizobium etli]
Length = 744
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|319784510|ref|YP_004143986.1| RelA/SpoT family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170398|gb|ADV13936.1| RelA/SpoT family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 742
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 178/304 (58%), Gaps = 8/304 (2%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGHQKRASGDPYFSHPLEVAAILTEMHMDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + I FG + LVEG++KL +L +++ K +A+ L
Sbjct: 66 IAVALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKKLDLVSK------KAEQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TLD +P KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLDHMPEAKRLRIAEETMDIYAPLAGRMGMQGMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAM-VTSAIEKLEQALKDKNISFLVLCGRHKS 453
+LE + F+ +NP+ + ++++L E F+ V + IEK L +K+ + R K
Sbjct: 180 EELEEIAFRFINPEAYRAVTARLAEIFERNKGVLTDIEKALSTLFEKHAINASVKSRQKK 239
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
+S+ KM K L+ +++ DI+G R++V+ EDCY+AL +H W+ VPG+ KDYI+ PK
Sbjct: 240 PWSVFRKMEAKALSFEQLSDIFGFRVVVDTVEDCYRALGAIHTAWSMVPGRFKDYISTPK 299
Query: 514 FNGY 517
N Y
Sbjct: 300 QNDY 303
>gi|405380031|ref|ZP_11033875.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF142]
gi|397323436|gb|EJJ27830.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF142]
Length = 744
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSQEKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGLVKKIEAELRDLLIANGLTTAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|359143861|ref|ZP_09178076.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces sp. S4]
Length = 836
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 122 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 181
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 182 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 233
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 234 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 293
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 294 VRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 349
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 350 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 398
>gi|418406564|ref|ZP_12979883.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens 5A]
gi|358007057|gb|EHJ99380.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens 5A]
Length = 744
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 178/291 (61%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RA+GDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRANGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L + R K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKLKKLDLVTR------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ +P KR R ++ET+EI+ PLA R+G+ + +LE+L F++LNP+
Sbjct: 134 LVKLADRLHNMRTMEYMPADKRSRISEETMEIYAPLAGRMGMQDMRDELEDLSFRYLNPE 193
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++++L +E +E ++ ++L + L + + GR K YS+ KM K L
Sbjct: 194 AYETVTNRLQELETRNEGLIKKIEDELRELLVANGLLGASVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG R++V++ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRILVDDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|16303981|gb|AAL16895.1|AF421216_2 ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 843
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 129 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 188
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 189 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 240
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 241 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 300
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 301 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 356
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 357 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 405
>gi|116251272|ref|YP_767110.1| stringent response protein [Rhizobium leguminosarum bv. viciae
3841]
gi|424874563|ref|ZP_18298225.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|115255920|emb|CAK07001.1| putative stringent response protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|393170264|gb|EJC70311.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 744
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|440226021|ref|YP_007333112.1| GTP pyrophosphokinase [Rhizobium tropici CIAT 899]
gi|440037532|gb|AGB70566.1| GTP pyrophosphokinase [Rhizobium tropici CIAT 899]
Length = 743
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 174/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMRLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDEMFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSPEKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHINPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
H ++ +L E +E +V +L L ++ ++ GR K YS+ KM K L
Sbjct: 194 AHETVTKRLEELSRRNEGLVKKIETELRDLLVANGLANAMVKGRLKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ DIYG RL+V++ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDIYGFRLLVDDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|288817459|ref|YP_003431806.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenobacter thermophilus TK-6]
gi|384128229|ref|YP_005510842.1| (p)ppGpp synthetase I SpoT/RelA [Hydrogenobacter thermophilus TK-6]
gi|288786858|dbj|BAI68605.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenobacter thermophilus TK-6]
gi|308751066|gb|ADO44549.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobacter thermophilus
TK-6]
Length = 699
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 176/289 (60%), Gaps = 11/289 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA E H Q+RASG+PY++H +E A+ LA +G ++ + A LLHD L+D +Y
Sbjct: 25 VRKAIDFIEERHEHQVRASGEPYIMHPIEVAITLAEMGLDADTIVAALLHDVLEDTPTTY 84
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG GVAD+V+GV+KL + E +A+ + LA A D R +L+K
Sbjct: 85 QELKEKFGQGVADIVQGVTKLGKFEFKDMERQ------KAENYRKLLLATAKDLRVILVK 138
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL L K+ R AKETLEI+VP+ANRLG+ K +LE+LCF +L P ++
Sbjct: 139 LADRLHNMKTLGYLRKDKQVRIAKETLEIYVPIANRLGVWKIKTELEDLCFMYLYPAEYE 198
Query: 412 ELSS---KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + + +E + S I KL++AL+ NI ++ R K LY I K ++K + +
Sbjct: 199 RVKNFVGRSKKDLEEYLKRSFIPKLKEALRTFNIDAHIMY-RPKHLYGIWQKTVRKGIKL 257
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++HD+ G+R+I+ ++CY L ++H + VPGK DYI+ PK N Y
Sbjct: 258 EDVHDVLGVRVILSTPQECYLVLGIIHSTFKPVPGKFDDYISLPKPNLY 306
>gi|424914796|ref|ZP_18338160.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850972|gb|EJB03493.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 744
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|50541737|gb|AAT78347.1| RelA [Rhizobium etli]
Length = 744
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|421190653|ref|ZP_15647949.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB422]
gi|421191378|ref|ZP_15648655.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB548]
gi|399969423|gb|EJO03763.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB422]
gi|399972201|gb|EJO06415.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB548]
Length = 748
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 187/320 (58%), Gaps = 17/320 (5%)
Query: 201 MEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCV 260
+E+ E + Y K +LA Q+K V A+ A++ H GQ R SG+ Y+ H +
Sbjct: 4 IENRSFEDVHDIYVK-YLAPDQVKR-------VDSAYQLAKKMHAGQKRKSGEDYIYHPI 55
Query: 261 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 320
+ A +LA + + +AAG LHD ++D + D I + +G VAD+V+GV+KL ++ +
Sbjct: 56 QVAGILADLKMDPDTIAAGFLHDVVEDTPETNDEIRQNYGDDVADIVDGVTKLGRIHYES 115
Query: 321 RENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLE 379
E N A + LAMA D R +++KLADRLHNM TL K+ R A ETL+
Sbjct: 116 TEENMAENH------RKLLLAMAKDVRVIIVKLADRLHNMRTLQVHRPEKQHRIASETLD 169
Query: 380 IFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQAL 437
I+ PLA+RLG++ K +LE+L ++L+PD++ ++ + +E A + SA +++E+ +
Sbjct: 170 IYAPLAHRLGLANIKWELEDLSLRYLDPDEYHRIAKMMHSRREERDADIASATKQIEKVI 229
Query: 438 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 497
D I + GR K +YSI+ KM K EI+D+ +R++V++ +DCY AL +H
Sbjct: 230 SDLKIGHFEVTGRPKHIYSIYRKMTDKHKQFSEIYDLLAIRVLVDSVDDCYAALGTIHAN 289
Query: 498 WAEVPGKMKDYITRPKFNGY 517
W +PG+ KDYI PK NGY
Sbjct: 290 WKPLPGRFKDYIALPKPNGY 309
>gi|416125363|ref|ZP_11595961.1| GTP pyrophosphokinase [Staphylococcus epidermidis FRI909]
gi|319400960|gb|EFV89179.1| GTP pyrophosphokinase [Staphylococcus epidermidis FRI909]
Length = 729
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 182/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLHDVIEDTSY 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K E+ +T+AI K++ + ++S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSERESYITNAINKIKNEMTKMSLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMY 308
>gi|335034156|ref|ZP_08527517.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. ATCC 31749]
gi|333794474|gb|EGL65810.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. ATCC 31749]
Length = 754
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 180/293 (61%), Gaps = 13/293 (4%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RA+GDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 30 EALLNKAYVYAMQKHGQQKRANGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 89
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L + R K +A+ L + LA++D R +
Sbjct: 90 ATRAEIDELFGEDIGRLVEGLTKLKKLDLVTR------KAKQAENLRKLLLAISDDVRVL 143
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ +P KR R ++ET+EI+ PLA R+G+ + +LE+L F++LNP+
Sbjct: 144 LVKLADRLHNMRTMEYMPADKRSRISEETMEIYAPLAGRMGMQDMRDELEDLSFRYLNPE 203
Query: 409 QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLC----GRHKSLYSIHCKMLKK 464
+ ++++L+E E I+K+E L++ ++ +L GR K YS+ KM K
Sbjct: 204 AYETVTNRLLEL--ETRNEGLIKKIEDELRELLVANGLLGTHVKGRQKKPYSVFRKMQSK 261
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L+ +++ D+YG R++V++ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 262 SLSFEQLSDVYGFRILVDDIPGCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 314
>gi|241203884|ref|YP_002974980.1| (p)ppGpp synthetase I SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857774|gb|ACS55441.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 744
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|408787767|ref|ZP_11199494.1| GTP pyrophosphohydrolase/synthetase [Rhizobium lupini HPC(L)]
gi|424909913|ref|ZP_18333290.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845944|gb|EJA98466.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408486388|gb|EKJ94715.1| GTP pyrophosphohydrolase/synthetase [Rhizobium lupini HPC(L)]
Length = 744
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 178/291 (61%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RA+GDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRANGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L + R K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKLKKLDLVTR------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ +P KR R ++ET+EI+ PLA R+G+ + +LE+L F++LNP+
Sbjct: 134 LVKLADRLHNMRTMEYMPADKRSRISEETMEIYAPLAGRMGMQDMRDELEDLSFRYLNPE 193
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++++L +E +E ++ ++L + L + + GR K YS+ KM K L
Sbjct: 194 AYETVTNRLQELETRNEGLIKKIEDELRELLVANGLIGAGVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG R++V++ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRILVDDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|424880848|ref|ZP_18304480.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517211|gb|EIW41943.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 744
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|258645309|ref|ZP_05732778.1| GTP diphosphokinase [Dialister invisus DSM 15470]
gi|260402658|gb|EEW96205.1| GTP diphosphokinase [Dialister invisus DSM 15470]
Length = 792
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 184/319 (57%), Gaps = 20/319 (6%)
Query: 202 EDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVE 261
E N + L+TY E + ++H AF A++AH GQ+RA+G+PY++H +
Sbjct: 67 EYNKLMEKLKTYIHETQSMETIRH----------AFEIAQKAHEGQIRATGEPYIIHPLA 116
Query: 262 TAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAR 321
A +LA + ++ + A LLHD ++D + + I R FG VA +V+G++KLSQ +
Sbjct: 117 VAYILAELEIDAQGIIAALLHDVVEDTAYTLEDIRRIFGDEVAFIVDGITKLSQFHYKDK 176
Query: 322 ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 380
E+ + + MFLAMA D R V+IKLADRLHNM TL K+ R AKET+EI
Sbjct: 177 EDQ------QTENFRKMFLAMAQDIRVVVIKLADRLHNMRTLGIFRREKQIRIAKETMEI 230
Query: 381 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALK 438
+ PLA+RLGI K +LE+LCF +L+ +++ +L ++ + E +V +E L Q++
Sbjct: 231 YAPLAHRLGIYNIKWELEDLCFHYLHTEEYYDLVRQMRQKRKAREEIVNDTMEVLHQSIN 290
Query: 439 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 498
D I + GR K YSI+ KM + + +I+D+Y +R+IV CY L + H LW
Sbjct: 291 DAGIK-ATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVNTIPQCYAVLGIAHSLW 349
Query: 499 AEVPGKMKDYITRPKFNGY 517
+P + KDYI PK N Y
Sbjct: 350 KPLPNRFKDYIAVPKPNMY 368
>gi|317498122|ref|ZP_07956424.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894599|gb|EFV16779.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 765
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 183/288 (63%), Gaps = 9/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A +AH Q R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 48 VERAYKVAYKAHEKQKRKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTH 107
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +LIK
Sbjct: 108 EDIVRDFGEEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIK 162
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD +
Sbjct: 163 LADRLHNMRTMQFMRPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYE 222
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+L L + EA + +++++ + I + GR K ++SI+ KM+ + T+D
Sbjct: 223 DLEHSLDSAKEEREAFIQEIVDEVKGHIDHAGIKAEI-DGRVKHMFSIYKKMVNQHKTID 281
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D++ +R+ V+ +DCY AL ++H+++ +PG+ KDYI PK N Y
Sbjct: 282 QIYDLFAVRIKVDTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMY 329
>gi|337269782|ref|YP_004613837.1| (p)ppGpp synthetase I SpoT/RelA [Mesorhizobium opportunistum
WSM2075]
gi|336030092|gb|AEH89743.1| (p)ppGpp synthetase I, SpoT/RelA [Mesorhizobium opportunistum
WSM2075]
Length = 742
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 178/304 (58%), Gaps = 8/304 (2%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGHQKRASGDPYFSHPLEVAAILTEMHMDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + I FG + LVEG++KL +L +++ K +A+ L
Sbjct: 66 IAVALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKKLDLVSK------KAEQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TLD +P KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLDHMPEAKRLRIAEETMDIYAPLAGRMGMQGMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAM-VTSAIEKLEQALKDKNISFLVLCGRHKS 453
+LE + F+ +NP+ + ++++L E F+ V + IEK L +K+ + R K
Sbjct: 180 EELEEIAFRFINPEAYRAVTARLAEIFERNKGVLTDIEKALSTLFEKHAINAGVKSRQKK 239
Query: 454 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 513
+S+ KM K L+ +++ DI+G R++V+ EDCY+AL +H W+ VPG+ KDYI+ PK
Sbjct: 240 PWSVFRKMEAKALSFEQLSDIFGFRVVVDTVEDCYRALGAIHTTWSMVPGRFKDYISTPK 299
Query: 514 FNGY 517
N Y
Sbjct: 300 QNDY 303
>gi|347532608|ref|YP_004839371.1| (p)ppGpp synthetase I SpoT/RelA [Roseburia hominis A2-183]
gi|345502756|gb|AEN97439.1| (p)ppGpp synthetase I, SpoT/RelA [Roseburia hominis A2-183]
Length = 788
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 185/312 (59%), Gaps = 11/312 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E +A+ + H + KA++ A AH GQ R SG+PY++H + A++LA + +
Sbjct: 42 ELIASVRKYHPSADISLIEKAYHVARDAHEGQTRKSGEPYIVHPLCVAIILAELELDKET 101
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+AAGLLHD L+D ++ D I F V LV+GV+KL L +N K A+RL
Sbjct: 102 IAAGLLHDVLEDTVMTADEIKEEFSEEVLLLVDGVTKLRHLHLTDNSHNHDQKDRSAERL 161
Query: 336 H-------TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
MFLAMA D R +LIKLADRLHNM TL + R A+ET EI+ P+A R
Sbjct: 162 EMQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYQSKEAQIRIARETQEIYCPIAQR 221
Query: 388 LGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFL 445
LGIS K++L++L K+L P+ + +L ++ + + V S +E++ +K I
Sbjct: 222 LGISKIKIELDDLSLKYLEPEAYYDLVRQIDQRKSVRDDYVQSLVEEVRAHIKAAGI-VA 280
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
+ GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+
Sbjct: 281 EIEGRAKHFFSIYKKMVNQDKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRF 340
Query: 506 KDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 341 KDYIAMPKPNMY 352
>gi|91784884|ref|YP_560090.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Burkholderia xenovorans LB400]
gi|385208471|ref|ZP_10035339.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderia sp. Ch1-1]
gi|91688838|gb|ABE32038.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Burkholderia xenovorans LB400]
gi|385180809|gb|EIF30085.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderia sp. Ch1-1]
Length = 785
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 175/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 73 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWNLDAQSIMAALLHDVMEDQGVTK 132
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 133 AELAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 186
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++
Sbjct: 187 LADRLHNMRTLGAVPAEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYA 246
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++A+ D + V GR K+++SI+ KM K+L+
Sbjct: 247 TLEKAVKAARGNRREVVGKILESVQRAIADAKLDAEV-TGREKTIFSIYKKMRDKQLSFS 305
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 306 QVLDVYGFRVVVESALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 353
>gi|319940232|ref|ZP_08014584.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
gi|319810534|gb|EFW06870.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
Length = 738
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA A HRGQ R SG+PY++H ++ A +LA + ++ VA G LHD ++D +
Sbjct: 27 LVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGFLHDVVEDTNAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FG V +V+GV+KL ++ ++ E A + M +AM+ D R +L+
Sbjct: 87 LDDLEREFGHEVRVIVDGVTKLGKVKYMSHEEQLA------ENHRKMLMAMSKDIRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++LNP +
Sbjct: 141 KLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLAFRYLNPTEF 200
Query: 411 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++S + E E +V + K+E ++N+ + GR K +YSI+ KM KK
Sbjct: 201 YKISHLMKEKRREREELVDEVVHKIETYASERNLHGEIY-GRPKHIYSIYRKMQDKKKRF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R I++ + D Y L +H+LW +PG+ KDYI K NGY
Sbjct: 260 DEIYDLIAIRCILDTQSDVYAMLGYIHELWRPMPGRFKDYIANRKANGY 308
>gi|407474189|ref|YP_006788589.1| GTP pyrophosphokinase/(p)ppGpp synthetase I [Clostridium acidurici
9a]
gi|407050697|gb|AFS78742.1| GTP pyrophosphokinase/(p)ppGpp synthetase I [Clostridium acidurici
9a]
Length = 721
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 179/294 (60%), Gaps = 18/294 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D VIKA++ AE+AH GQ R SG+ Y +H V AM+LA + ++ +AAGL+HD L+D +
Sbjct: 19 DEVIKAYHFAEQAHEGQFRKSGEKYFIHPVNVAMILAELNMDTATIAAGLMHDVLEDTDV 78
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ I F +A+LV+GV+KL +L +E N + + L M +AM+ D R ++
Sbjct: 79 TYETIVEEFSEEIANLVDGVTKLKKLKYKTKEEN------QVENLRKMIIAMSKDIRVII 132
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHN TLD + K++ A ETL+I+ P+ANRLG+S K +LE+L ++++P
Sbjct: 133 IKLADRLHNARTLDFMSDAKQKEKALETLDIYAPIANRLGMSKVKWELEDLSLRYIDPKG 192
Query: 410 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
+ +L K+ E + ++ S EKL++ IS GR K YSI+ KM+
Sbjct: 193 YFDLVEKVSMKRKEREKYIRKIIVSLKEKLDEMEIPNEIS-----GRPKHFYSIYRKMVY 247
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ T ++I D+ +R+IV+ +DCY L + H LW +PG+ KDYI PK N Y
Sbjct: 248 QNKTFEQIFDLTAIRVIVDTVKDCYGVLGIAHTLWKPIPGRFKDYIAMPKPNMY 301
>gi|209548596|ref|YP_002280513.1| (p)ppGpp synthetase I SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534352|gb|ACI54287.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 744
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYETVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|167767126|ref|ZP_02439179.1| hypothetical protein CLOSS21_01644 [Clostridium sp. SS2/1]
gi|167711101|gb|EDS21680.1| RelA/SpoT family protein [Clostridium sp. SS2/1]
gi|291559545|emb|CBL38345.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
SSC/2]
Length = 765
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 183/288 (63%), Gaps = 9/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+ A +AH Q R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 48 VERAYKVAYKAHEKQKRKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTH 107
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +LIK
Sbjct: 108 EDIVRDFGEEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIK 162
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD +
Sbjct: 163 LADRLHNMRTMQFMRPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYE 222
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+L L + EA + +++++ + I + GR K ++SI+ KM+ + T+D
Sbjct: 223 DLERSLDSAKEEREAFIQEIVDEVKGHIDRAGIKAEI-DGRVKHMFSIYKKMVNQHKTID 281
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D++ +R+ V+ +DCY AL ++H+++ +PG+ KDYI PK N Y
Sbjct: 282 QIYDLFAVRIKVDTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMY 329
>gi|365866646|ref|ZP_09406254.1| putative ppGpp synthetase [Streptomyces sp. W007]
gi|364003919|gb|EHM25051.1| putative ppGpp synthetase [Streptomyces sp. W007]
Length = 759
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 44 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 103
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 104 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 155
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 156 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 215
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 216 VRLVAERAPKRDEYLAIVTDEVQADLRAARIKA----TVTGRPKHYYSVYQKMIVRGRDF 271
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 272 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 320
>gi|220904804|ref|YP_002480116.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869103|gb|ACL49438.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 719
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 175/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ + KA+ A AH GQ R SG+PYL H + A LA +G + + V AGLLHDT++D
Sbjct: 21 ELIQKAYVYAATAHAGQTRLSGEPYLSHPLAVADTLAEMGFDESTVVAGLLHDTVEDTKA 80
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + FG VAD+V+GV+K+S + +E +A+ + M LAM+ D R ++
Sbjct: 81 TLEELDENFGEDVADIVDGVTKISMIPFENKEE------AQAENIRKMILAMSHDMRVLM 134
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TLD K++ A+ET++I+ PLANRLG+ K LE+L FK+L PD
Sbjct: 135 VKLADRLHNMRTLDFQKAHKQKGIAQETMDIYAPLANRLGLYIMKRNLEDLSFKYLRPDI 194
Query: 410 HTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
++ L + ++ ++ ++ ++ L I V GR K YSI+ KM + LT
Sbjct: 195 FNQIDHWLDKHQVVEKQIIAKVVDLIKDLLASNGIEGQVY-GRIKHKYSIYKKMQSQSLT 253
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+DE+HDI R++V++ DCY AL +VH W V G+ KDYI+ PK NGY
Sbjct: 254 LDEMHDIMAFRVLVKDIRDCYAALGLVHSQWRPVHGRFKDYISMPKTNGY 303
>gi|261341742|ref|ZP_05969600.1| hypothetical protein ENTCAN_08220 [Enterobacter cancerogenus ATCC
35316]
gi|288316109|gb|EFC55047.1| guanosine 3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Enterobacter cancerogenus ATCC 35316]
Length = 705
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 170/286 (59%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA+LVEGVSKL +L N K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKL------NFRDKKEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV++ + CY+ L +H L+ PG++KDYI PK NGY
Sbjct: 258 MDIYAFRVIVQDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGY 303
>gi|296107622|ref|YP_003619323.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Legionella pneumophila 2300/99 Alcoy]
gi|295649524|gb|ADG25371.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Legionella pneumophila 2300/99 Alcoy]
Length = 707
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 174/286 (60%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQMR SG+PY+ H V A++LA + + + A LLHD ++D +S +
Sbjct: 25 QAYLVAEKAHHGQMRRSGEPYITHPVAAALILARMRLDYQTIMATLLHDVVEDTSISKEE 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V LV+GV+KL+++ + +A+ M LAM D R +++KLA
Sbjct: 85 LVNQFGEEVTALVDGVTKLTKI------KFESKAEAQAENFRKMVLAMVKDIRVIIVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL ++P KR+R A ETLEI+ P+ANRLG+ + + LE+L F+ L P ++ +
Sbjct: 139 DRLHNMRTLGSMPAAKRRRIAIETLEIYAPIANRLGMHSIYIGLEDLGFQALYPMRYRAI 198
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + +T IEK L+ AL NI + + GR K LYSI+ KM +KK + EI
Sbjct: 199 KSAVEKSRGNRRELTQTIEKDLQHALSQLNIPYEQVFGRQKHLYSIYRKMKQKKASFTEI 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ R+I E+ + CY+ L +H + VP + KDYI PK NGY
Sbjct: 259 TDVFAFRIITEDIDSCYRILGALHCTYKPVPQRFKDYIGIPKANGY 304
>gi|381336834|ref|YP_005174609.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|356644800|gb|AET30643.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 745
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 179/288 (62%), Gaps = 9/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ A H+ Q R SG+PY++H ++ A +LA + ++ V +G LHD ++D +
Sbjct: 28 VKKAYEWALELHKEQKRKSGEPYIIHPIQVAGILAELKMDTATVISGYLHDVVEDTTATL 87
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FG +A +++GV+K+S++ +S+ A+ + LAM+ D R +++K
Sbjct: 88 QDVRDNFGETIAQIIDGVTKISKIQY------QSSQEQLAENHRKLLLAMSKDIRVIIVK 141
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL AL K++R AKETLEI+ PLA+RLGIST K +LE+L +++P+Q+
Sbjct: 142 LADRLHNMRTLGALREVKQKRIAKETLEIYAPLADRLGISTIKWELEDLSLSYIDPEQYY 201
Query: 412 ELSSKLVECFDEAM--VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
++S + +E + V A+E++ A+KD +S + + GR K +YSI+ KM+ K +
Sbjct: 202 HIASLMNMKREERISYVQEAVEQINGAIKDLELSHVDVYGRPKHIYSIYRKMVDKHKAFE 261
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R++ ++ D Y L +H W +PG+ KDYI PK NGY
Sbjct: 262 EIYDLLAVRVLTDSIPDTYAVLGAIHSKWTPIPGRFKDYIALPKANGY 309
>gi|271967384|ref|YP_003341580.1| GTP diphosphokinase [Streptosporangium roseum DSM 43021]
gi|270510559|gb|ACZ88837.1| GTP diphosphokinase [Streptosporangium roseum DSM 43021]
Length = 785
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ A HR Q R SGDPY+ H + A +LA +G + + A LLHDT++D
Sbjct: 77 LIERAYDVAAYHHRDQKRKSGDPYITHPLAVATILAELGTDDETLCAALLHDTVEDTAYG 136
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG +A LV+GV+KL ++ +A+ + M +AM+ D R ++I
Sbjct: 137 LDELRSDFGDNIALLVDGVTKLDKVK--------FGDAAQAETVRKMVVAMSRDIRVLVI 188
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ LP KRQ+ ++ETLEIF PLA+RLG++T K +LE+L F L P ++
Sbjct: 189 KLADRLHNMRTMRYLPEHKRQQKSRETLEIFAPLAHRLGMNTIKWELEDLAFAMLYPKRY 248
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E++ + E + + IEK+ L++ I V+ GR K YS++ KM+ + +
Sbjct: 249 DEIARMVSERAPRRDLFLQEVIEKVSGDLREAKIR-AVVKGRPKHYYSVYQKMIARDVAF 307
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN Y
Sbjct: 308 DDIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMY 356
>gi|385652802|ref|ZP_10047355.1| GTP pyrophosphokinase [Leucobacter chromiiresistens JG 31]
Length = 731
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 176/295 (59%), Gaps = 16/295 (5%)
Query: 229 REDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
R D + +A+ AERAHRGQ R SG+PY+ H + A +LA +G V+AA LLHDT++
Sbjct: 27 RADLTVIERAYAVAERAHRGQKRRSGEPYITHPIAVAQILADLGIAPGVIAAALLHDTVE 86
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 345
D + D + + FG +A LV+GV+KL ++ + +A+ + M +AMA D
Sbjct: 87 DTEYTLDQLTQEFGEEIAMLVDGVTKLDKVKY--------GDSAQAETVRKMVVAMAKDI 138
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R ++IKLADRLHN T + +R A+ET+EI+ PLA+RLGI + K +LE+L F L
Sbjct: 139 RVLVIKLADRLHNARTWGFVSGDSAKRKAQETIEIYAPLAHRLGIQSMKTELEDLSFAVL 198
Query: 406 NPDQHTELSSKLVECFD---EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
P + E+ + LVE + + +V I +E L++ I V GR K LYSI+ KM+
Sbjct: 199 KPKLYAEIQN-LVEQRNPQRDELVGRVIGAIEGDLRESKIRGEV-TGRPKELYSIYQKMI 256
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ D+I+D+ G+R++V + DCY L VH W +PG+ KDYI PKFN Y
Sbjct: 257 VRGREFDDIYDLVGIRVLVNSIRDCYAVLGAVHARWTPIPGRFKDYIATPKFNLY 311
>gi|54294906|ref|YP_127321.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Legionella pneumophila str. Lens]
gi|148359580|ref|YP_001250787.1| guanosine-3, 5-bis(diphosphate)-3- pyrophosphohydrolase [Legionella
pneumophila str. Corby]
gi|397664492|ref|YP_006506030.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Legionella
pneumophila subsp. pneumophila]
gi|397667737|ref|YP_006509274.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Legionella
pneumophila subsp. pneumophila]
gi|53754738|emb|CAH16225.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Legionella pneumophila str. Lens]
gi|148281353|gb|ABQ55441.1| guanosine-3, 5-bis(diphosphate)-3- pyrophosphohydrolase [Legionella
pneumophila str. Corby]
gi|395127903|emb|CCD06105.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Legionella
pneumophila subsp. pneumophila]
gi|395131148|emb|CCD09403.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Legionella
pneumophila subsp. pneumophila]
Length = 707
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 174/286 (60%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQMR SG+PY+ H V A++LA + + + A LLHD ++D +S +
Sbjct: 25 QAYLVAEKAHHGQMRRSGEPYITHPVAAALILARMRLDYQTIMATLLHDVVEDTSISKEE 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V LV+GV+KL+++ + +A+ M LAM D R +++KLA
Sbjct: 85 LVNQFGEEVTALVDGVTKLTKI------KFESKAEAQAENFRKMVLAMVKDIRVIIVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL ++P KR+R A ETLEI+ P+ANRLG+ + + LE+L F+ L P ++ +
Sbjct: 139 DRLHNMRTLGSMPAAKRRRIAIETLEIYAPIANRLGMHSIYIGLEDLGFQALYPMRYRAI 198
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + +T IEK L+ AL NI + + GR K LYSI+ KM +KK + EI
Sbjct: 199 KSAVEKSRGNRRELTQTIEKDLQHALSQLNIPYEQVFGRQKHLYSIYRKMKQKKASFTEI 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ R+I E+ + CY+ L +H + VP + KDYI PK NGY
Sbjct: 259 TDVFAFRIITEDIDSCYRILGALHCTYKPVPQRFKDYIGIPKANGY 304
>gi|417922710|ref|ZP_12566197.1| RelA/SpoT family protein [Streptococcus cristatus ATCC 51100]
gi|342832237|gb|EGU66537.1| RelA/SpoT family protein [Streptococcus cristatus ATCC 51100]
Length = 739
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 185/319 (57%), Gaps = 17/319 (5%)
Query: 202 EDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVE 261
E+N+ + K++LA + FV KA A H GQ R SG+PY++H ++
Sbjct: 4 EENLTGNQVVALTKKYLAAEDVA-------FVQKALIYAMECHSGQTRKSGEPYIVHPIQ 56
Query: 262 TAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAR 321
A +LA + ++ VA G LHD ++D + D + R FG V +V+GV+KL ++ +
Sbjct: 57 VAGILAKLKLDAVSVACGFLHDVVEDTAATLDDLEREFGHDVRVIVDGVTKLGKVKYKSH 116
Query: 322 ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 380
E A + M +AM+ D R +L+KLADRLHNM TL+ L K++R ++ET+EI
Sbjct: 117 EEQLA------ENHRKMLMAMSEDLRVILVKLADRLHNMRTLNHLRPDKQERISQETMEI 170
Query: 381 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAMVTSAIEKLEQALK 438
+ PLA+RLGIS+ K +LE+L F++LNP + ++S + E EA+V + K+E
Sbjct: 171 YAPLAHRLGISSVKWELEDLSFRYLNPTEFYKISHMMKEKRREREALVEEVVHKIETYAG 230
Query: 439 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 498
++N+ + GR K +YSI+ KM KK DEI+D+ +R I+ D Y L +H+LW
Sbjct: 231 ERNLHGKIY-GRPKHIYSIYRKMQDKKKRFDEIYDLIAIRCILSTHSDVYAMLGYIHELW 289
Query: 499 AEVPGKMKDYITRPKFNGY 517
+PG+ KDYI K NGY
Sbjct: 290 KPMPGRFKDYIANRKANGY 308
>gi|242373934|ref|ZP_04819508.1| GTP pyrophosphokinase [Staphylococcus epidermidis M23864:W1]
gi|242348358|gb|EES39960.1| GTP pyrophosphokinase [Staphylococcus epidermidis M23864:W1]
Length = 734
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 180/290 (62%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 31 EYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 90
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 91 TFEDVKSMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 144
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 145 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 204
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K EA + +AI K+E + +S + GR K +YSI+ KM+K+K
Sbjct: 205 YFRIVNLMKKKRSEREAYIANAISKIEAEMDKMKLSGEI-SGRPKHIYSIYRKMMKQKKQ 263
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N Y
Sbjct: 264 FDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNMY 313
>gi|418735206|ref|ZP_13291618.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410749462|gb|EKR02354.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 674
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|418963994|ref|ZP_13515820.1| RelA/SpoT family protein [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383342165|gb|EID20399.1| RelA/SpoT family protein [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 738
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA A HRGQ R SG+PY++H ++ A +LA + ++ VA G LHD ++D +
Sbjct: 27 LVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGFLHDVVEDTNAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + R FG V +V+GV+KL ++ ++ E A + M +AM+ D R +L+
Sbjct: 87 LDDLEREFGHDVRMIVDGVTKLGKVKYMSHEEQLA------ENHRKMLMAMSKDIRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++LNP +
Sbjct: 141 KLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLAFRYLNPTEF 200
Query: 411 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++S + E E +V + K+E ++N+ + GR K +YSI+ KM KK
Sbjct: 201 YKISHLMKEKRREREELVDEVVHKIETYASERNLHGEIY-GRPKHIYSIYRKMQDKKKRF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R I++ + D Y L +H+LW +PG+ KDYI K NGY
Sbjct: 260 DEIYDLIAIRCILDTQSDVYAMLGYIHELWRPMPGRFKDYIANRKANGY 308
>gi|329938958|ref|ZP_08288332.1| GTP pyrophosphokinase [Streptomyces griseoaurantiacus M045]
gi|329301843|gb|EGG45736.1| GTP pyrophosphokinase [Streptomyces griseoaurantiacus M045]
Length = 807
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 175/289 (60%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D +
Sbjct: 89 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLED 148
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 149 LRRDFGDVVALLVDGVTKLDRVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 200
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 201 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 260
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 261 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 316
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 317 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 365
>gi|291450322|ref|ZP_06589712.1| ppGpp synthetase [Streptomyces albus J1074]
gi|291353271|gb|EFE80173.1| ppGpp synthetase [Streptomyces albus J1074]
Length = 740
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 26 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 85
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 86 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 137
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 138 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 197
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 198 VRLVAERAPKRDEYLAIVTDEVQADLRAARIKA----TVTGRPKHYYSVYQKMIVRGRDF 253
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 254 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 302
>gi|152979858|ref|YP_001353016.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Janthinobacterium sp. Marseille]
gi|151279935|gb|ABR88345.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Janthinobacterium sp. Marseille]
Length = 758
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 183/312 (58%), Gaps = 17/312 (5%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
L T E+L ++LK V +A+ ++ AH GQMR SG+PY+ H + A + A
Sbjct: 48 QLTTKLAEYLTPSELKK-------VKEAYRFSDEAHLGQMRMSGEPYISHPIAVAEICAD 100
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
++ + A LLHD ++D + D + FGA VA+LV+G+SKL ++ +
Sbjct: 101 WKLDAQAIMAALLHDVMEDQDVRKDELIERFGAPVANLVDGLSKLEKI------EFQSQV 154
Query: 329 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ M LAMA D R +L+KLADRLHNM TL ++ K++R A+ET+E++VP+A+R
Sbjct: 155 EAQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGSMAPAKKRRIARETMEVYVPIAHR 214
Query: 388 LGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFL 445
LG++ +L++L F HL P ++ L+ K +V+ +E + L I
Sbjct: 215 LGLNNIYRELQDLAFSHLYPMRYKTLAKAVKAARGNRREVVSKILESVNNTLDATGIPAQ 274
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
V GR K+LY I+ KML K+L+ ++ DIYG R++V++ +CY AL +H L+ +PGK
Sbjct: 275 VY-GREKTLYGIYTKMLNKRLSFSQVLDIYGFRVVVDSFANCYVALGTLHALFKPMPGKF 333
Query: 506 KDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 334 KDYIAIPKLNGY 345
>gi|54297935|ref|YP_124304.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Legionella pneumophila str. Paris]
gi|53751720|emb|CAH13142.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Legionella pneumophila str. Paris]
Length = 707
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 174/286 (60%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQMR SG+PY+ H V A++LA + + + A LLHD ++D +S +
Sbjct: 25 QAYLVAEKAHHGQMRRSGEPYITHPVAAALILARMRLDYQTIMATLLHDVVEDTSISKEE 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V LV+GV+KL+++ + +A+ M LAM D R +++KLA
Sbjct: 85 LVNQFGEEVTALVDGVTKLTKI------KFESKAEAQAENFRKMVLAMVKDIRVIIVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL ++P KR+R A ETLEI+ P+ANRLG+ + + LE+L F+ L P ++ +
Sbjct: 139 DRLHNMRTLGSMPAAKRRRIAIETLEIYAPIANRLGMHSIYIGLEDLGFQALYPMRYRAI 198
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + +T IEK L+ AL NI + + GR K LYSI+ KM +KK + EI
Sbjct: 199 KSAVEKSRGNRRELTQTIEKDLQHALSQLNIPYEQVFGRQKHLYSIYRKMKQKKASFTEI 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ R+I E+ + CY+ L +H + VP + KDYI PK NGY
Sbjct: 259 TDVFAFRIITEDIDSCYRILGALHCTYKPVPQRFKDYIGIPKANGY 304
>gi|282857439|ref|ZP_06266672.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
gi|282584724|gb|EFB90059.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
Length = 816
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 174/286 (60%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A A +AH QMRASG+PY++H V +LA + + + AGLLHD L+D ++ D
Sbjct: 122 EALVFAAQAHGDQMRASGEPYVIHPVYVTSILADMRMDLPTLQAGLLHDVLEDTPVTADE 181
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FGA V LV+GV+KL +L E+ +A+ L MFL MA D R VLIKLA
Sbjct: 182 MKNRFGATVEMLVDGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIKLA 235
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM +L AL K+QR AKETLEI+ PLA+RLGI K LE+L FK+ +P + ++
Sbjct: 236 DRTHNMRSLGALRRDKQQRIAKETLEIYAPLAHRLGIYQVKRTLEDLAFKYYDPTMYYDI 295
Query: 414 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
++ + EA+V A+E L + L+ I + GR K YSI KM +KKL+++++
Sbjct: 296 KRRVKKRLPEREAIVNQAMEVLGERLRSIGIEAHI-KGRAKHFYSIFEKMNRKKLSVEQL 354
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ LR+IV + CY L +VH LW +PG+ DYI PK N Y
Sbjct: 355 YDLLALRVIVNDVTTCYTVLGIVHTLWKPIPGQFDDYIANPKNNMY 400
>gi|209519142|ref|ZP_03267947.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. H160]
gi|209500442|gb|EEA00493.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. H160]
Length = 786
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 175/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 73 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWNLDAQAIMAALLHDVMEDQGVTK 132
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 133 AELAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 186
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++
Sbjct: 187 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYA 246
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++A+ D + V GR K+++SI+ KM K+L+
Sbjct: 247 TLEKAVKAARGNRREVVGKILESVQRAIADAKLDAEV-TGREKTIFSIYKKMRDKQLSFS 305
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE+ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 306 QVLDVYGFRVVVESALECYTCIGALHALFKPVPGKFKDYIAIPKVNGY 353
>gi|160947570|ref|ZP_02094737.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
gi|158446704|gb|EDP23699.1| RelA/SpoT family protein [Parvimonas micra ATCC 33270]
Length = 717
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
+ KA+ + H GQ R SG+PY +H V A +LA + + + AGL+HD L+D +++
Sbjct: 21 ITKAYNFTKECHEGQFRNSGEPYFIHPVAVANILADLYMDDATIIAGLMHDILEDTEVTF 80
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIK 351
+ + FG +A+LV+GV+KL ++ +++ + +AD L M LAM +D R ++IK
Sbjct: 81 EEMSGMFGEEIANLVDGVTKLKKIKYQSKQES------QADNLRKMLLAMNSDIRVIIIK 134
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
+ADRLHN+ TL+ + K+ AKETLEI+ PLA RLG+S K +LE+L ++L P+ +
Sbjct: 135 IADRLHNIRTLEYMKKAKQLEKAKETLEIYAPLAYRLGMSNVKWELEDLSLRYLEPEIYY 194
Query: 412 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+L+ ++ + E ++ IE++ +LK+ NI + GR KSLYSI+ KM K+ + D
Sbjct: 195 DLAERVKKKRSEREKIINDIIEEISISLKEHNIQGEI-SGRPKSLYSIYKKMYKQNKSFD 253
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI D+ +R+IV DCY L +VH W +P + KDYI PK N Y
Sbjct: 254 EIFDLTAIRIIVPTISDCYAVLGIVHSKWKPIPSRFKDYIAVPKPNLY 301
>gi|424891053|ref|ZP_18314652.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|424894354|ref|ZP_18317928.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393173271|gb|EJC73316.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393178581|gb|EJC78620.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 744
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET+EI+ PLA R+G+ + +LE L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSADKRARISEETMEIYAPLAGRMGMQDMREELEELSFRHMNPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L ++ + GR K YS+ KM K L
Sbjct: 194 AYDTVTKRLEELSKRNEGIVKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG RLIVE+ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRLIVEDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|387929855|ref|ZP_10132532.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
gi|387586673|gb|EIJ78997.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
Length = 731
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 175/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ VIKA+ A+ AH Q R SG+PY++H ++ A +LA + + VAAG LHD ++D +
Sbjct: 26 NLVIKAYEFAKAAHSDQYRKSGEPYIIHPIQVAGILADLEMDPITVAAGFLHDVVEDTDV 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + F VA LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEEMREAFNDEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LPL K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPLEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
Query: 410 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ + + K E + IE++ L + +I + GR K +YSI+ KM +
Sbjct: 200 YYRIVNLMKKKRAEREQYLDEVIEEVRNRLNEVSIKAEI-SGRPKHIYSIYRKMALQNKQ 258
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 259 FNEIYDLLAVRIVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|307610733|emb|CBX00340.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Legionella pneumophila 130b]
Length = 707
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 174/286 (60%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQMR SG+PY+ H V A++LA + + + A LLHD ++D +S +
Sbjct: 25 QAYLVAEKAHHGQMRRSGEPYITHPVAAALILARMRLDYQTIMATLLHDVVEDTSISKEE 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V LV+GV+KL+++ + +A+ M LAM D R +++KLA
Sbjct: 85 LVNQFGEEVTALVDGVTKLTKI------KFESKAEAQAENFRKMVLAMVKDIRVIIVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL ++P KR+R A ETLEI+ P+ANRLG+ + + LE+L F+ L P ++ +
Sbjct: 139 DRLHNMRTLGSMPAAKRRRIAIETLEIYAPIANRLGMHSIYIGLEDLGFQALYPMRYRAI 198
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + +T IEK L+ AL NI + + GR K LYSI+ KM +KK + EI
Sbjct: 199 KSAVEKSRGNRRELTQTIEKDLQHALSQLNIPYEQVFGRQKHLYSIYRKMKQKKASFTEI 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ R+I E+ + CY+ L +H + VP + KDYI PK NGY
Sbjct: 259 TDVFAFRIITEDIDSCYRILGALHCTYKPVPQRFKDYIGIPKANGY 304
>gi|170693642|ref|ZP_02884800.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia graminis C4D1M]
gi|170141424|gb|EDT09594.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia graminis C4D1M]
Length = 787
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 174/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A + + A LLHD ++D ++
Sbjct: 73 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWNLDGQAIMAALLHDVMEDQGVTK 132
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 133 AELAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 186
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++
Sbjct: 187 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYA 246
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++A+ D I V GR K+++SI+ KM K+L+
Sbjct: 247 TLEKAVKAARGNRREVVGKILESVQRAIADAKIDAEV-TGREKTIFSIYKKMRDKQLSFS 305
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++V++ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 306 QVLDVYGFRVVVDSALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 353
>gi|302874945|ref|YP_003843578.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium cellulovorans 743B]
gi|307690437|ref|ZP_07632883.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulovorans 743B]
gi|302577802|gb|ADL51814.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulovorans 743B]
Length = 724
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
++ + KA++ E+AH GQ R SG+ Y +H VE A +L +G ++ + AGLLHD ++D
Sbjct: 18 KELIEKAYFFTEKAHEGQKRLSGEAYFIHPVEVAKILTEMGMDTATIVAGLLHDVVEDTD 77
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+Y+ + R F VADLV+GV+KL ++ +E +AD + M LAM D R +
Sbjct: 78 FTYEDMVREFTKEVADLVDGVTKLDKIHYRTKEE------AQADNIRKMLLAMTKDIRVI 131
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM T+ K++ AKET++I+ PLA+RLGI K +LE+LC ++L+
Sbjct: 132 LIKLADRLHNMRTIKFQSPDKQKEIAKETMDIYAPLAHRLGIFKIKWELEDLCLRYLHST 191
Query: 409 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ +L K+ E + I++L L NI + GR K YSI+ KM+ K
Sbjct: 192 EYYDLVQKIASKRTERENDIREIIDELINNLGASNIHADI-DGRPKHFYSIYKKMVNKNK 250
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++D+I D+ +R++V+ +DCY L +VH ++ +PG+ KDYI PK N Y
Sbjct: 251 SLDQIFDLMAVRILVKTIKDCYATLGIVHTMYKPIPGRFKDYIAMPKPNMY 301
>gi|418721778|ref|ZP_13280952.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
09149]
gi|421095922|ref|ZP_15556630.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200801926]
gi|410361337|gb|EKP12382.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200801926]
gi|410741822|gb|EKQ90575.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
09149]
gi|456889585|gb|EMG00473.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200701203]
Length = 674
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|316934148|ref|YP_004109130.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris DX-1]
gi|315601862|gb|ADU44397.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris DX-1]
Length = 760
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 172/291 (59%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 54 EDLLNRAYVYAMMAHGEQTRASGDPYFSHPLEVAAILTNLKLDDATIVAALLHDTIEDTE 113
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L ++RE +A+ L + LA+AD R +
Sbjct: 114 ATRTEIDTMFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 167
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
LIKLADRLHNM TLD +P RQR A+ETL+I+ PLA R+G+ + +LE+L F+ L+P+
Sbjct: 168 LIKLADRLHNMRTLDFVPPASRQRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPE 227
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
T + +L + + ++ +L L I+ V GR K +SI KM +K +
Sbjct: 228 AFTVVMQRLDALAERNRNLIGEIETQLSANLARHGIAAEV-TGRRKRPFSIWTKMERKSV 286
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DIYG R++++ E CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 287 GFEQLSDIYGFRVVLDEVESCYRALGVVHTTWPMVPGRFKDYISTPKQNDY 337
>gi|417860536|ref|ZP_12505592.1| RelA [Agrobacterium tumefaciens F2]
gi|338823600|gb|EGP57568.1| RelA [Agrobacterium tumefaciens F2]
Length = 754
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 178/291 (61%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RA+GDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 30 EALLNKAYVYAMQKHGQQKRANGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTT 89
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++KL +L + R K +A+ L + LA++D R +
Sbjct: 90 ATRAEIDELFGEDIGRLVEGLTKLKKLDLVTR------KAKQAENLRKLLLAISDDVRVL 143
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T++ +P KR R ++ET+EI+ PLA R+G+ + +LE+L F++LNP+
Sbjct: 144 LVKLADRLHNMRTMEYMPADKRSRISEETMEIYAPLAGRMGMQDMRDELEDLSFRYLNPE 203
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++++L +E +E ++ ++L + L + + GR K YS+ KM K L
Sbjct: 204 AYETVTNRLQELETRNEGLIKKIEDELRELLVANGLIGANVKGRQKKPYSVFRKMQSKSL 263
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG R++V++ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 264 SFEQLSDVYGFRILVDDIPSCYRALGIVHTRWRVVPGRFKDYISTPKQNDY 314
>gi|148658211|ref|YP_001278416.1| (p)ppGpp synthetase I SpoT/RelA [Roseiflexus sp. RS-1]
gi|148570321|gb|ABQ92466.1| (p)ppGpp synthetase I, SpoT/RelA [Roseiflexus sp. RS-1]
Length = 774
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E+ V A+ A AH Q R SG+PY+ H V A +L + ++ VAA LLHD L+D
Sbjct: 71 EELVRNAYAVACEAHGKQKRDSGEPYIDHPVAVAHILIDLQLDAASVAAALLHDVLEDTL 130
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+S + + FGA +A+LV+ V+KLS L RE + MF+AMAD R V
Sbjct: 131 VSKEQLTALFGAEIANLVDSVTKLSALEARTREE------AQVGTYRKMFIAMADDPRVV 184
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM T+ +L +++R A ETLEI+ PLA+RLGI K +LE+ F LNP+
Sbjct: 185 LVKLADRLHNMRTIGSLSEERQKRMALETLEIYAPLAHRLGIWQIKWELEDRAFAVLNPE 244
Query: 409 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ E+S +L D E +V I++L Q L+ + I + GR K +YSI+ KM +K +
Sbjct: 245 KYQEISRQLSLRRDARERLVHRVIQRLRQVLEKEGIKADI-TGRPKHIYSIYRKMERKGV 303
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++D+I+D +R+IV+ DCY+ L +VH W VPG+ DYI PK + Y
Sbjct: 304 SLDQIYDQLAVRVIVDTVADCYRVLGLVHATWPPVPGEFDDYIAMPKESMY 354
>gi|307730696|ref|YP_003907920.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia sp. CCGE1003]
gi|307585231|gb|ADN58629.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. CCGE1003]
Length = 786
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 174/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A + + A LLHD ++D ++
Sbjct: 73 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWNLDGQAIMAALLHDVMEDQGVTK 132
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 133 AELAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 186
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++
Sbjct: 187 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYA 246
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++A+ D I V GR K+++SI+ KM K+L+
Sbjct: 247 TLEKAVKAARGNRREVVGKILESVQRAIADAKIDAEV-TGREKTIFSIYKKMRDKQLSFS 305
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++V++ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 306 QVLDVYGFRVVVDSALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 353
>gi|239637561|ref|ZP_04678533.1| GTP pyrophosphokinase [Staphylococcus warneri L37603]
gi|239596779|gb|EEQ79304.1| GTP pyrophosphokinase [Staphylococcus warneri L37603]
Length = 729
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 186/307 (60%), Gaps = 17/307 (5%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
AK +L+ ++ + +V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSESEYQ-------YVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+ AG LHD ++D ++D + F VA +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTAYTFDDVKNMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 393 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE+ ++++ Q+ + + K EA + +AI ++E + DK + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYIDNAIGQIETEM-DKMSIVGEINGR 241
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +YSI+ KM+K+K D+I D+ +R+IV DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAIRIIVNTINDCYAILGLVHTLWKPMPGRFKDYIA 301
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 302 MPKQNMY 308
>gi|372267890|ref|ZP_09503938.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Alteromonas
sp. S89]
Length = 705
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 178/291 (61%), Gaps = 14/291 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
FV +A++ AE+AH GQ R SG+PY+ H + A +LA + ++ +AA +LHD ++D +
Sbjct: 22 FVRRAYFYAEQAHEGQARRSGEPYITHPLAVATILAGMHMDAQSLAAAMLHDVIEDTGIP 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ FG +ADLV+GVSKL+Q ++ A K +A+ M LAMA D R +L+
Sbjct: 82 KAALAEQFGEEIADLVDGVSKLTQFET----DSPAEK--QAENFQKMALAMARDIRVILV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL +L KR R A+ETLEI+ P+ANRLG++ +++ E+ F + P +
Sbjct: 136 KLADRLHNMRTLGSLKPSKRARIARETLEIYAPIANRLGMNDVRIEFEDRAFFAIYPLRA 195
Query: 411 TELSSKLVECFDEAMVTSAIEKLEQA----LKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ L + LV +EK++ A L+ +NI LV+ GR K L+SI+ KM KK
Sbjct: 196 SRLRAALVAA--RGNRKELLEKIQNAIELRLERENIDALVI-GREKHLFSIYQKMRSKKK 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI D+Y R+IV++ + CY+ V+H L+ V + KDYI PK NGY
Sbjct: 253 SFKEIMDVYAFRIIVDSVDTCYRTFGVIHNLYKPVISEFKDYIAIPKSNGY 303
>gi|325290218|ref|YP_004266399.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophobotulus glycolicus DSM
8271]
gi|324965619|gb|ADY56398.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophobotulus glycolicus DSM
8271]
Length = 718
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 170/288 (59%), Gaps = 11/288 (3%)
Query: 234 IKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
IKA Y AE AHRGQ+R SG+ Y+ H +E A++LA + + + + A LHD +D
Sbjct: 22 IKAAYRYAEEAHRGQLRVSGEDYIQHPLEVALILAELEMDDSTIIAAFLHDVAEDTERKL 81
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ I + FG V LV+GV+KL +L + V+ + L MFLAMA D R +LIK
Sbjct: 82 EDIRKVFGEEVEGLVDGVTKLGKLE------YKSKMEVQVENLRKMFLAMAKDIRVILIK 135
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL K++ A+ET+EI+ PLANRLGI K +LE+L F++L+P ++
Sbjct: 136 LADRLHNMRTLRFKTEQKQKEIAQETIEIYAPLANRLGIFRIKWELEDLSFRYLHPQEYY 195
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+L L E + IE L+ L + I + GR K YSI+ KM+ + +
Sbjct: 196 DLVEGIALKRKEREEQINKVIEHLKARLGEVGIEADI-AGRPKHFYSIYKKMITQNKDLS 254
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IVE DCY AL V+H LW +PG+ KDYI PK N Y
Sbjct: 255 EIYDLTAIRVIVETVNDCYGALGVIHTLWKPIPGRFKDYIAMPKPNMY 302
>gi|148256036|ref|YP_001240621.1| GTP pyrophosphokinase [Bradyrhizobium sp. BTAi1]
gi|146408209|gb|ABQ36715.1| GTP pyrophosphokinase [Bradyrhizobium sp. BTAi1]
Length = 729
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 175/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 20 EDLLNRAYVYAMKAHGSQTRASGDPYFTHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ I R FG + LVEG++KL +L ++RE +A+ L + LA+A D R +
Sbjct: 80 ATRAEIDRLFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL+ +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P
Sbjct: 134 LVKLADRLHNMRTLEFVPEASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPQ 193
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ + +L + + ++ +L + +D ++ V GR K +SI KM +K +
Sbjct: 194 AYDVVMQRLDALAERNRNLIGEIESQLARKFRDHGLTARVF-GRRKRPFSIWTKMERKSI 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R+I+ + E CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 253 GFEQLSDIFGFRVIMPDLESCYRALGIVHTTWPVVPGRFKDYISTPKQNDY 303
>gi|134095317|ref|YP_001100392.1| bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Herminiimonas
arsenicoxydans]
gi|133739220|emb|CAL62269.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) (Penta-phosphate
guanosine-3'-pyrophosphohydrolase) [Herminiimonas
arsenicoxydans]
Length = 760
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 182/305 (59%), Gaps = 17/305 (5%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E+L ++LK + +A+ ++ AH GQMR SG+PY+ H + A + A ++
Sbjct: 55 EYLTPSELKK-------IKEAYRFSDEAHLGQMRMSGEPYISHPIAVAEICADWKLDAQA 107
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+ A LLHD ++D + D + FGA VA++V+G+SKL +L + +A+
Sbjct: 108 IMAALLHDVMEDQDVRKDELIERFGAPVANIVDGLSKLEKLE------FQSQIEAQAENF 161
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
M LAMA D R +LIKLADRLHNM TL ++ K++R A+ET+E++VP+A+RLG++
Sbjct: 162 RKMLLAMARDVRVILIKLADRLHNMRTLGSMSAVKKRRIARETMEVYVPIAHRLGLNNIY 221
Query: 395 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 452
+L++L F HL P ++ L K +V+ +E + + L+ I V GR K
Sbjct: 222 RELQDLAFSHLYPMRYKTLGKAVKAARGNRREVVSKILESVNKTLEATGIPAQVY-GREK 280
Query: 453 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 512
+LY I+ KML K+L+ ++ DIYG R++V++ +CY AL +H L+ +PGK KDYI P
Sbjct: 281 TLYGIYTKMLNKRLSFSQVLDIYGFRVVVDSFANCYVALGTLHALFKPMPGKFKDYIAIP 340
Query: 513 KFNGY 517
K NGY
Sbjct: 341 KLNGY 345
>gi|407714470|ref|YP_006835035.1| GTP pyrophosphokinase [Burkholderia phenoliruptrix BR3459a]
gi|407236654|gb|AFT86853.1| GTP pyrophosphokinase [Burkholderia phenoliruptrix BR3459a]
Length = 786
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 174/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A + + A LLHD ++D ++
Sbjct: 73 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWNLDGQAIMAALLHDVMEDQGVTK 132
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 133 AELAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 186
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++
Sbjct: 187 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYA 246
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++A+ D I V GR K+++SI+ KM K+L+
Sbjct: 247 TLEKAVKAARGNRREVVGKILESVQRAIADAKIDAEV-TGREKTIFSIYKKMRDKQLSFS 305
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++V++ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 306 QVLDVYGFRVVVDSALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 353
>gi|134098602|ref|YP_001104263.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|291008201|ref|ZP_06566174.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|133911225|emb|CAM01338.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
Length = 771
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 176/287 (61%), Gaps = 14/287 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE HR Q R SGDPY+ H + + +LA +G ++T + A LLHDT++D S +
Sbjct: 68 RAYDVAEDKHRDQRRKSGDPYITHPLAVSTILAELGMDTTTLVAALLHDTVEDTDYSLER 127
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V+ LV+GV+KL ++ KL EA+ + M +AMA D R ++IKLA
Sbjct: 128 LSGDFGEEVSHLVDGVTKLDKV-KLG-------AAAEAETIRKMIIAMARDPRVLVIKLA 179
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 180 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 239
Query: 414 SSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
+LV + + + I++L L ++ V GR K YSIH KM+ + D+
Sbjct: 240 V-RLVANRAPSRDTYLRTVIDELSGQLDTARLAARV-EGRPKHYYSIHQKMIVRGRDFDD 297
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
IHD+ G+R++V+ DCY A+ VVH LW +PG+ KDYI +P+F Y
Sbjct: 298 IHDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVY 344
>gi|52842226|ref|YP_096025.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|378777862|ref|YP_005186300.1| guanosine-3, 5-bis(diphosphate)-3-pyrophosphohydrolase [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629337|gb|AAU28078.1| guanosine-3,5-bis(diphosphate)-3-pyrophosphohydrolase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508677|gb|AEW52201.1| guanosine-3, 5-bis(diphosphate)-3-pyrophosphohydrolase [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 715
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 174/286 (60%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQMR SG+PY+ H V A++LA + + + A LLHD ++D +S +
Sbjct: 33 QAYLVAEKAHHGQMRRSGEPYITHPVAAALILARMRLDYQTIMATLLHDVVEDTSISKEE 92
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG V LV+GV+KL+++ + +A+ M LAM D R +++KLA
Sbjct: 93 LVNQFGEEVTALVDGVTKLTKI------KFESKAEAQAENFRKMVLAMVKDIRVIIVKLA 146
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL ++P KR+R A ETLEI+ P+ANRLG+ + + LE+L F+ L P ++ +
Sbjct: 147 DRLHNMRTLGSMPAAKRRRIAIETLEIYAPIANRLGMHSIYIGLEDLGFQALYPMRYRAI 206
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + +T IEK L+ AL NI + + GR K LYSI+ KM +KK + EI
Sbjct: 207 KSAVEKSRGNRRELTQTIEKDLQHALSQLNIPYEQVFGRQKHLYSIYRKMKQKKASFTEI 266
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ R+I E+ + CY+ L +H + VP + KDYI PK NGY
Sbjct: 267 TDVFAFRIITEDIDSCYRILGALHCTYKPVPQRFKDYIGIPKANGY 312
>gi|220920086|ref|YP_002495387.1| (p)ppGpp synthetase I SpoT/RelA [Methylobacterium nodulans ORS
2060]
gi|219944692|gb|ACL55084.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium nodulans ORS
2060]
Length = 737
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 176/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + +A+ A RAH QMRASGD + H +E A +L + + + A +LHDT++D
Sbjct: 20 EAMLNRAYVYAMRAHGSQMRASGDLFFAHPLEVAAILTELRVDDATIVAAVLHDTVEDTA 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 348
+ + I RTF + LV+G++K+ +L ++++ + + + LA+A D R +
Sbjct: 80 ATLEEINRTFTPEIGTLVDGLTKIKRLDLVSKQ------AAQGENFRKLLLAIAADVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL +P KR R A+ETL+I+ PLA R+G+ + +LE+L F++L PD
Sbjct: 134 LVKLADRLHNMRTLHHMPPEKRVRIAQETLDIYAPLAGRMGMQELREELEDLSFRNLKPD 193
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ +S +L + E++V S L Q L K I+ V GR K YSI KM +K +
Sbjct: 194 VYATISKRLDDLTTKSESLVESIERDLVQRLAAKGITAQV-RGRQKRPYSIWSKMERKSV 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G R++V++ + CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 253 AFEQLSDIFGFRVVVDSVDTCYRALGVVHTTWPMVPGRYKDYISTPKQNDY 303
>gi|424845459|ref|ZP_18270070.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
22815]
gi|363986897|gb|EHM13727.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
22815]
Length = 762
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 174/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +AF A AH QMR G+PY++H V A +LA + + + A LLHD L+D +
Sbjct: 67 VGEAFVFAAGAHGEQMRMGGEPYIIHPVFAASILADMKLDVATLQAALLHDVLEDTECTA 126
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + FG V LV+GV+KL +L E+ +A+ L MFL MA D R VLIK
Sbjct: 127 EQMRERFGEVVTTLVDGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIK 180
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADR HNM +L A+ K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +P+ +
Sbjct: 181 LADRTHNMRSLGAMRRDKQIRTAKETLEIYAPLAHRLGIYQMKRTLEDLAFKYYDPEMYY 240
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
E+ SK+ + EA+V A+E L+ L + I + GR K YSI+ KM +KKL++D
Sbjct: 241 EIKSKVKKRLPEREAVVEQALEILQARLDEMGIKNSI-KGRAKHFYSIYEKMNRKKLSID 299
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++D+ LR+IVE+ CY L VVH +W +PG+ DYI PK N Y
Sbjct: 300 QLYDLLALRVIVEDVAQCYSVLGVVHTIWKPIPGQFDDYIANPKNNMY 347
>gi|293400748|ref|ZP_06644893.1| GTP diphosphokinase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305774|gb|EFE47018.1| GTP diphosphokinase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 738
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 175/291 (60%), Gaps = 12/291 (4%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ AE+ H GQ R SG+PY++H ++ +LA + +AAGLLHD ++D +
Sbjct: 32 DLITRAYLCAEKNHAGQYRKSGEPYIIHAIQVGYILAMLRTGPKAIAAGLLHDVVEDCDV 91
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ I FG VA LVE V+K+ L K E K A +F+AMA D R +L
Sbjct: 92 CLEQISEMFGEEVASLVESVTKIGAL-KFKDE-----KEYLASNHRKIFIAMAKDVRVIL 145
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKL+DRLHNM TL + K+Q+ A ETLE++ P+A+RLGIS K +LE+LCF++LN ++
Sbjct: 146 IKLSDRLHNMRTLQYMTPQKQQKIASETLEVYAPIAHRLGISDIKNELEDLCFQYLNKEK 205
Query: 410 HTELSSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ E+ +KLVE +A V S I ++ L + I + + GR K LYSI+ KM+ K
Sbjct: 206 YYEI-AKLVEKRKTERDAQVQSMIREISSLLDEHQIKYRIF-GRSKHLYSIYKKMITKNK 263
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI D+ +R+I + + CY+ L +H + +PG+ KDYI PK N Y
Sbjct: 264 RFEEILDLLAIRIITDTDTACYEILGYIHAKYRPIPGRFKDYIAMPKVNMY 314
>gi|323527032|ref|YP_004229185.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia sp. CCGE1001]
gi|323384034|gb|ADX56125.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. CCGE1001]
Length = 786
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 174/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V AF+ ++ AH GQ R SG+PY+ H V A + A + + A LLHD ++D ++
Sbjct: 73 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWNLDGQAIMAALLHDVMEDQGVTK 132
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 133 AELAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 186
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++
Sbjct: 187 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYA 246
Query: 412 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
L K +V +E +++A+ D I V GR K+++SI+ KM K+L+
Sbjct: 247 TLEKAVKAARGNRREVVGKILESVQRAIADAKIDAEV-TGREKTIFSIYKKMRDKQLSFS 305
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++V++ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 306 QVLDVYGFRVVVDSALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 353
>gi|167629913|ref|YP_001680412.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
gi|167592653|gb|ABZ84401.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
Length = 736
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+FV +AF A+ AH GQ+R SG+PY+ H + A +LA + + +AAGLLHD ++D +
Sbjct: 23 EFVRRAFEYADAAHTGQLRKSGEPYIYHPMAVAYILADLELDVATIAAGLLHDVVEDTAI 82
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + + + FG VA +V+GV+KLS+L +++ + + L MFLAMA D R +L
Sbjct: 83 TQEQLEKDFGPEVALMVDGVTKLSRLEFHSKQEQ------QVESLRKMFLAMAKDIRVIL 136
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL K++ A ET+E+F PLANRLGIS K +LE+L ++L P+
Sbjct: 137 IKLADRLHNMRTLKHQTPEKQREIAIETIELFAPLANRLGISRIKWELEDLALRYLEPET 196
Query: 410 HTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ +L +++ E + I L + L I + GR K YSI+ KM +K
Sbjct: 197 YYDLVTRIATKRAEREERINEIIAILREKLAAVGIKAEI-SGRPKHFYSIYRKMTSQKKD 255
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ EI+D+ +R++V++ +DCY AL ++H +W +P + KDYI PK N Y
Sbjct: 256 LSEIYDLIAVRVLVDSVKDCYGALGIIHTIWKPIPMRFKDYIATPKTNMY 305
>gi|421100332|ref|ZP_15560964.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200901122]
gi|410796642|gb|EKR98769.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200901122]
Length = 674
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIIHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|423612609|ref|ZP_17588470.1| GTP pyrophosphokinase [Bacillus cereus VD107]
gi|401245334|gb|EJR51690.1| GTP pyrophosphokinase [Bacillus cereus VD107]
Length = 727
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 182/312 (58%), Gaps = 27/312 (8%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+ V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 STVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 393 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 506 KDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 297 KDYIAMPKANLY 308
>gi|238897836|ref|YP_002923515.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465593|gb|ACQ67367.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 700
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 180/312 (57%), Gaps = 17/312 (5%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
NL KE+L Q+K + +A+ A AH GQ+R+SG+PY+ H V + +LA
Sbjct: 6 NLYLLIKEYLPEEQIKR-------LRQAYLVARDAHDGQVRSSGEPYITHPVAVSCILAK 58
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
+ + + A LLHD L+D +Y+ + FG VA+LVEG+SKL +L N K
Sbjct: 59 MRLDYETLIAALLHDVLEDTPATYEDMELLFGKTVAELVEGLSKLDKL------NFRDKK 112
Query: 329 TVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ M +AM D R +LIKLADR HNM TL +L KR+R A ETLEI+ PLA+R
Sbjct: 113 EAQAENFRKMIMAMVDDIRVILIKLADRTHNMRTLGSLHPAKRRRIALETLEIYSPLAHR 172
Query: 388 LGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFL 445
LGI K++LE L F+ L P+++ + K + M+ +++ L++ IS
Sbjct: 173 LGIHHLKIELEELGFQVLYPNRYRVIKEVIKTARGNRKEMIQKIFSEIKGRLREARISCK 232
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
V GR K LYSI+CKM +K+ D I DIY R+IV+ + CY+ L +H L+ P ++
Sbjct: 233 V-SGREKHLYSIYCKMRRKEQQFDSIMDIYAFRVIVKEVDTCYRVLGQIHCLYKPRPSRV 291
Query: 506 KDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 292 KDYIAIPKANGY 303
>gi|57233675|ref|YP_180760.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
gi|57224123|gb|AAW39180.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
Length = 728
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 125/287 (43%), Positives = 176/287 (61%), Gaps = 16/287 (5%)
Query: 244 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 303
H GQMR SG+P++ H + A+ LA + +S +AA LLHD +DA +S + I + FGA V
Sbjct: 33 HTGQMRKSGEPFIEHPLNVAITLADLQLDSATLAAALLHDVPEDAHISLEQIEKKFGADV 92
Query: 304 ADLVEGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLH 357
A LV+GV+KLS+L+ + AR + +A+ L M +AM+ D R V IKLADR H
Sbjct: 93 AKLVDGVTKLSKLALGPGIEDARRPGGNASLRQAENLRKMLVAMSEDLRVVFIKLADRFH 152
Query: 358 NMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS--- 414
NM TL AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L+P + +++
Sbjct: 153 NMRTLQALSAEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLV 212
Query: 415 -SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK---KKLTMDE 470
SKL + + SAI Q+ +KN + L GR K LYSI+ KM K + ++
Sbjct: 213 DSKLAQRKNYIEHVSAI---LQSEFEKNGLKVELSGRPKHLYSIYQKMEKYASQGKQFED 269
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I+D+ LR++V + DCY A+ +VH LW +PG DYI PK NGY
Sbjct: 270 IYDVLALRVLVNDIPDCYHAIGIVHSLWHPIPGAFDDYIANPKPNGY 316
>gi|374985148|ref|YP_004960643.1| ppGpp synthetase [Streptomyces bingchenggensis BCW-1]
gi|297155800|gb|ADI05512.1| ppGpp synthetase [Streptomyces bingchenggensis BCW-1]
Length = 832
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 118 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 177
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 178 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 229
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 230 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 289
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 290 VRLVAERAPKRDEYLAVVTDQVQGDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 345
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN Y
Sbjct: 346 AEIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMY 394
>gi|253997766|ref|YP_003049829.1| (p)ppGpp synthetase I SpoT/RelA [Methylovorus glucosetrophus
SIP3-4]
gi|313199830|ref|YP_004038488.1| (p)ppGpp synthetase I SpoT/RelA [Methylovorus sp. MP688]
gi|253984445|gb|ACT49302.1| (p)ppGpp synthetase I, SpoT/RelA [Methylovorus glucosetrophus
SIP3-4]
gi|312439146|gb|ADQ83252.1| (p)ppGpp synthetase I, SpoT/RelA [Methylovorus sp. MP688]
Length = 740
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 190/326 (58%), Gaps = 25/326 (7%)
Query: 197 LTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDF--VIKAFYEAERAHRGQMRASGDP 254
L + ED+++ L Y K ED V A+ ++ AH GQ+R SG+P
Sbjct: 21 LPADSEDSLLTQRLRVYLKP-------------EDIEQVWAAYRFSDMAHTGQLRKSGEP 67
Query: 255 YLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLS 314
Y+ H V A +LA + + + A LLHD ++D ++ + FG VA+LV+G+SKL
Sbjct: 68 YITHPVSVACILAELHMDVPTLVAALLHDVVEDTGVTTQEVSERFGKQVAELVDGLSKLD 127
Query: 315 QLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRF 373
++ K + E +A+ M LAM+ D R +L+KLADRLHNM TL + KR+R
Sbjct: 128 KI-KFSTETEA-----QAENFRKMLLAMSQDVRVILVKLADRLHNMSTLGVMTPEKRRRT 181
Query: 374 AKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIE 431
A+ETLEI+ P+ANRLG++ +LE+L FKHL P +++ +S ++ + +V ++
Sbjct: 182 ARETLEIYAPIANRLGLNAIYQELEDLSFKHLYPMRYSVISKAILAARGNRKEVVGKILD 241
Query: 432 KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQAL 491
+ + L + +I V GR K LYSI+ KM K +T +I+DIYG R+IV++ CY AL
Sbjct: 242 AIRERLGEMHIEAEV-TGREKHLYSIYRKMTGKTVTFSQIYDIYGFRIIVKDLSSCYLAL 300
Query: 492 RVVHQLWAEVPGKMKDYITRPKFNGY 517
V+H L+ +PGK KDYI PK NGY
Sbjct: 301 GVLHGLYKPIPGKFKDYIAIPKANGY 326
>gi|345010658|ref|YP_004813012.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces violaceusniger Tu
4113]
gi|344037007|gb|AEM82732.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces violaceusniger Tu
4113]
Length = 843
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 130 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 189
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 190 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMARDPRVLVIKLA 241
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 242 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 301
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 302 VRLVAERAPKRDEYLAVVTDQVQGDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 357
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN Y
Sbjct: 358 AEIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMY 406
>gi|323702158|ref|ZP_08113825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|333924436|ref|YP_004498016.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323532845|gb|EGB22717.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|333749997|gb|AEF95104.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 723
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 177/289 (61%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ KA+ AE AHRGQ R SG+ Y++H + A++LA + + VAAGLLHD ++D ++
Sbjct: 22 FLRKAYNFAENAHRGQKRISGEDYIVHPLAIAIILAELQLDIKTVAAGLLHDVVEDTGVT 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
I FG+ VA +V+GV+KL +L +RE +A+ L MFLAMA D R +LI
Sbjct: 82 LADIENNFGSEVARMVDGVTKLGKLQFQSREER------QAENLRKMFLAMAKDIRVILI 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHN+ TL K++ A+ETL F PLA+RLGI K +LE+L F++ P+Q+
Sbjct: 136 KLADRLHNLRTLQFQSERKQKEVAEETLVFFAPLAHRLGIYKIKWELEDLSFRYKEPEQY 195
Query: 411 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
L ++ + E + I L + L NI + GR K+LYSI+ KM++++ +
Sbjct: 196 QHLKMQIAKTRAKREEYIQEVIRLLAEKLNAVNIRAEI-QGRPKNLYSIYQKMVEQQKEL 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I D+ +R++V+ +DCY AL + H LW +PG+ KDYI PK N Y
Sbjct: 255 KDIFDVQAVRVLVDTVKDCYGALGIAHTLWKPIPGRFKDYIAMPKSNMY 303
>gi|170781154|ref|YP_001709486.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155722|emb|CAQ00843.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 749
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 174/306 (56%), Gaps = 12/306 (3%)
Query: 215 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
++ + A+L H + +A+ AERAH GQ R SG+PY+ H V A +LA +G
Sbjct: 29 EQLIRTARLHHPKADMSLIERAYAVAERAHEGQKRKSGEPYITHPVAVAQILADLGIGPK 88
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 334
+AA LLHDT++D + D + FG +A LV+GV+KL +L + +A+
Sbjct: 89 TLAAALLHDTVEDTEYTLDMLRHDFGDEIAMLVDGVTKLDKLK--------YGDSAQAET 140
Query: 335 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 393
+ M +AM+ D R +++KLADRLHN T + +R AKETLEI+ PLA+RLGIST
Sbjct: 141 VRKMVVAMSKDIRVLVVKLADRLHNARTWGFVESASAERKAKETLEIYAPLAHRLGISTI 200
Query: 394 KVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRH 451
K +LE+L F L P + E+ + K E V I+ + L+ I V GR
Sbjct: 201 KWELEDLSFAVLYPKIYVEIENLVKQRTPQREEFVQQVIDSVNDDLRAAKIRGKV-AGRP 259
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K YSI+ KM+ + DEI+D+ G+R++V++ DCY L +H W VPG+ KDYI
Sbjct: 260 KQYYSIYQKMVVRGREFDEIYDLVGIRVLVDSLRDCYAVLGAIHARWTPVPGRFKDYIAT 319
Query: 512 PKFNGY 517
PKFN Y
Sbjct: 320 PKFNLY 325
>gi|73662434|ref|YP_301215.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418575969|ref|ZP_13140116.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|72494949|dbj|BAE18270.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379325717|gb|EHY92848.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 729
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 186/309 (60%), Gaps = 14/309 (4%)
Query: 214 AKEFLANAQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGA 271
A E L+ A K + +ED FV+K+++ A AH GQ R +G PY++H ++ A +L +
Sbjct: 9 ADEVLSKA--KSYLSKEDYEFVLKSYHIAYEAHEGQFRKNGLPYIMHPIQVAGILTEMHL 66
Query: 272 NSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE 331
+ + AG LHD ++D ++D + F +A +VEGV+KL ++ ++E +
Sbjct: 67 DGPTIVAGFLHDVIEDTPYTFDDVKGMFNEEIAVIVEGVTKLKKVKYRSKEEQ------Q 120
Query: 332 ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGI 390
A+ +F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI
Sbjct: 121 AENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGI 180
Query: 391 STWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLC 448
+T K +LE+ ++ + Q+ + + K E + +AI +++ L NI +
Sbjct: 181 NTIKWELEDTALRYTDSVQYFRIVNLMKKKRSEREEYIQNAINQIQSDLTSMNIVGDI-N 239
Query: 449 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 508
GR K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDY
Sbjct: 240 GRPKHIYSIYRKMVKQKKQFDQIFDLLAIRIIVNSINDCYAVLGLVHTLWKPMPGRFKDY 299
Query: 509 ITRPKFNGY 517
I PK N Y
Sbjct: 300 IAMPKQNMY 308
>gi|269956465|ref|YP_003326254.1| (p)ppGpp synthetase I SpoT/RelA [Xylanimonas cellulosilytica DSM
15894]
gi|269305146|gb|ACZ30696.1| (p)ppGpp synthetase I, SpoT/RelA [Xylanimonas cellulosilytica DSM
15894]
Length = 781
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 170/286 (59%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AHRGQ+R SGDPY+ H V A +LA +G T +AA LLHDT++D S D
Sbjct: 65 RAYTVAEKAHRGQLRKSGDPYITHPVSVATILAELGFEGTTIAAALLHDTVEDTDYSLDQ 124
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG A LV+GV+KL ++ +A+ + M +AMA D R ++IKLA
Sbjct: 125 LRTDFGDDAALLVDGVTKLDKVKY--------GDAAQAETVRKMVVAMAKDIRVLVIKLA 176
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHN T +P +R A+ETLEI+ PLA+RLG++T K +LE+L F+ L P + E+
Sbjct: 177 DRLHNARTWKYVPSSSAERKARETLEIYAPLAHRLGMNTIKWELEDLSFQALYPKVYDEI 236
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ E E ++ E+++ L+ I V GR K YSI+ KM+ + +I
Sbjct: 237 VHLVAERAPAREEYLSVVREQIQADLRGAKIKATV-TGRPKHYYSIYQKMIVRGHDFQDI 295
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G R++V++ DCY AL +H W VPG+ KDYI PKFN Y
Sbjct: 296 YDLVGTRVLVDSVRDCYAALGALHARWNPVPGRFKDYIAMPKFNMY 341
>gi|226323920|ref|ZP_03799438.1| hypothetical protein COPCOM_01697 [Coprococcus comes ATCC 27758]
gi|225207469|gb|EEG89823.1| RelA/SpoT family protein [Coprococcus comes ATCC 27758]
Length = 774
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 182/287 (63%), Gaps = 11/287 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA++ A AH+GQ R SG+ Y++H + ++LA + + + AG+LHD ++D ++ +
Sbjct: 62 KAYHIARDAHKGQTRKSGEEYIIHPLWVGIILAQLEMDKETIVAGILHDVVEDTVMTDEE 121
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKL 352
I + FG VA LV+GV+KL QLS +A K V+A+ L MFLAMA D R ++IKL
Sbjct: 122 IRQEFGDEVALLVDGVTKLGQLS------YSADKLEVQAENLRKMFLAMAKDIRVIIIKL 175
Query: 353 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 412
ADRLHNM TL + K+ AKET++I+ P+A RLGIS K +L++L K+ P+ +
Sbjct: 176 ADRLHNMRTLQYMRPEKQLEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFND 235
Query: 413 LSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
L ++ + E V ++++ +K+ NI V GR K +SI+ KM+ + T+D+
Sbjct: 236 LVKQINARKTEREEFVQQIVDEVSTHMKNANIDAEV-NGRVKHFFSIYKKMVNQDKTVDQ 294
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I+D++ +R+IV++ +DCY AL V+H+++ VPG+ KDYI PK N Y
Sbjct: 295 IYDLFAVRIIVDSVKDCYAALGVIHEMYTPVPGRFKDYIAMPKANMY 341
>gi|335030989|ref|ZP_08524458.1| GTP diphosphokinase [Streptococcus anginosus SK52 = DSM 20563]
gi|333770798|gb|EGL47791.1| GTP diphosphokinase [Streptococcus anginosus SK52 = DSM 20563]
Length = 738
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 178/293 (60%), Gaps = 12/293 (4%)
Query: 230 EDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDD 287
ED V+ KA + A HRGQ R SG+PY++H ++ A +LA + ++ VA G LHD ++D
Sbjct: 23 EDVVLVQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGFLHDVVED 82
Query: 288 AFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DAR 346
+ D + FG V +V+GV+KL ++ ++ E A + M +AM+ D R
Sbjct: 83 TAATLDDLEGEFGHDVRVIVDGVTKLGKVKYMSHEEQLA------ENHRKMLMAMSKDIR 136
Query: 347 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 406
+L+KLADRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++LN
Sbjct: 137 VILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLAFRYLN 196
Query: 407 PDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
P + ++S + E E +V + K+E ++N+ + GR K +YSI+ KM K
Sbjct: 197 PTEFYKISHLMKEKRREREELVDEVVHKIETYASERNLHGEIY-GRPKHIYSIYRKMQDK 255
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
K DEI+D+ +R I++ + D Y L +H+LW +PG+ KDYI K NGY
Sbjct: 256 KKRFDEIYDLIAIRCILDTQSDVYAMLGYIHELWRPMPGRFKDYIANRKANGY 308
>gi|388455923|ref|ZP_10138218.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fluoribacter dumoffii Tex-KL]
Length = 708
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 176/286 (61%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH GQMR SG+PY+ H V A++LA + + + A LLHD ++D +S +
Sbjct: 25 QAYLVAEKAHHGQMRRSGEPYITHPVAAALILARMRLDYQTIMATLLHDVVEDTSVSKED 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG + LV+GV+KL+++ ++ +A+ M LAM D R +++KLA
Sbjct: 85 LTRQFGEEITSLVDGVTKLTKIKFESKAE------AQAENFRKMVLAMVKDIRVIIVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL ++P KR+R A ETLEI+ P+ANRLG+ + V LE+L F+ L P ++ +
Sbjct: 139 DRLHNMKTLGSMPYAKRRRIAIETLEIYAPIANRLGMHSIYVGLEDLGFQALYPMRYRAI 198
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + +T IE+ L+ AL NI + + GR K LYSI+ KM +KK + EI
Sbjct: 199 KSAVEKSRGNRRELTQTIERDLQLALAQLNIPYEQVFGRQKHLYSIYKKMRQKKASFTEI 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ R+I E+ + CY+ L +H + VP + KDYI PK NGY
Sbjct: 259 TDVFAFRVITEDIDSCYRILGALHCTYKPVPQRFKDYIGIPKANGY 304
>gi|374339110|ref|YP_005095846.1| RelA/SpoT family (p)ppGpp synthetase [Marinitoga piezophila KA3]
gi|372100644|gb|AEX84548.1| (p)ppGpp synthetase, RelA/SpoT family [Marinitoga piezophila KA3]
Length = 717
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 179/292 (61%), Gaps = 15/292 (5%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+Y A+ AH GQMRASG+P+ H + +LA + + +A+ LLHD ++D + +
Sbjct: 30 KAYYLAKEAHNGQMRASGEPFFEHPKAVSKILAELKMDVESIASALLHDVVEDCDVPIEK 89
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEA-DRLHTMFLAMA-DARAVLIKL 352
I FG ++ +V+GV+K+S L + N K++E + + M LAM+ D R +++KL
Sbjct: 90 ITNEFGPEISRIVDGVTKISNLKLNEKLNKVDMKSLEKIETIRKMLLAMSNDIRVIIVKL 149
Query: 353 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 412
ADRLHNM TL +P K+ ++ETL+I+ P+A+RLGI K +LE+L FK+L P+ + +
Sbjct: 150 ADRLHNMRTLQYVPYKKQVIKSQETLKIYAPIAHRLGIHKIKAELEDLSFKYLYPEAYED 209
Query: 413 LSSKLVECFDEAMVTSAIEKLEQ-------ALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
L KL E V++ +++E+ L+ NI L GR K LYSI KML+K
Sbjct: 210 LKRKL-----EERVSNVHDRMEEYKTTIKEQLEKHNIK-ATLQGRTKHLYSIWEKMLRKN 263
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ ++I+D LR+I E+ CY AL VVH +W VPG++KDYI PK NGY
Sbjct: 264 KSFEDIYDFIALRIITESPTACYAALGVVHSVWRPVPGRIKDYIAVPKSNGY 315
>gi|417916440|ref|ZP_12560019.1| GTP diphosphokinase [Streptococcus mitis bv. 2 str. SK95]
gi|342829647|gb|EGU63996.1| GTP diphosphokinase [Streptococcus mitis bv. 2 str. SK95]
Length = 738
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 178/294 (60%), Gaps = 12/294 (4%)
Query: 229 RED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
+ED FV KA A H GQ R SG+PY++H ++ A +LA + ++ VA G LHD ++
Sbjct: 22 KEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGFLHDVVE 81
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 345
D + D + R FG V +V+GV+KL ++ + E A + M +AM+ D
Sbjct: 82 DTEATLDDLEREFGHDVRIIVDGVTKLGKVEYKSIEEQLA------ENHRKMLMAMSEDI 135
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R +L+KL+DRLHNM TL+ L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++L
Sbjct: 136 RVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLSFRYL 195
Query: 406 NPDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
NP + +++ + E EA+V + KLE ++N+ + GR K +YSI+ KM
Sbjct: 196 NPTEFYKITHMMKEKRREREALVDEVVTKLEDYTSERNLKGKIY-GRPKHIYSIYRKMQD 254
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
KK +EI+D+ +R I+E D Y L VH+LW +PG+ KDYI K NGY
Sbjct: 255 KKKRFEEIYDLIAIRCILETHSDVYAMLGYVHELWKPMPGRFKDYIANRKANGY 308
>gi|86609008|ref|YP_477770.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557550|gb|ABD02507.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 760
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +AF + H+GQ R SGDPY+ H V A LL +G ++ VAAGLLHD ++D +
Sbjct: 50 DLLRRAFEFSYCLHQGQKRKSGDPYIAHPVAVATLLRELGGDAVTVAAGLLHDVIEDTEV 109
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 348
+ + + FG+ V LVEGV+KLS+ N +SKT +A+ MF+AMA D R +
Sbjct: 110 TPEALEAEFGSEVRLLVEGVTKLSKF-------NFSSKTEQQAENFRRMFVAMAKDIRVI 162
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
++KLADRLHNM TL L K+++ A ET+EIF PLANRLGI +K +LE+L FK+L+ +
Sbjct: 163 VVKLADRLHNMRTLQYLSPSKQRQIAAETMEIFAPLANRLGIWHFKWELEDLAFKYLDYE 222
Query: 409 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ ++ ++K E EA + + IE+L Q L + + GR K LYSI+ KM ++
Sbjct: 223 AYRKIQELVNAKRAE--REAEIQAFIEELRQNLLQAGLEHFEISGRPKHLYSIYRKMQQQ 280
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV +CY+ L VVH + +PG+ KDYI PK N Y
Sbjct: 281 HKEFHEIYDLSAVRVIVHTNSECYRVLAVVHNCFRPIPGRFKDYIGLPKANRY 333
>gi|255994169|ref|ZP_05427304.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
gi|255993837|gb|EEU03926.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
Length = 733
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 179/299 (59%), Gaps = 12/299 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A + H GQ R SG+PY++H A +LA +G + + AGLLHD ++D + +
Sbjct: 25 EAYDVAYKQHNGQKRKSGEPYIIHPEAVAKILAELGMDEDTLIAGLLHDVIEDTDFTPEM 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ FG+ V LVEGV+KL L +E V+A+ + MFLAM+ D R ++IKLA
Sbjct: 85 VEEKFGSDVRHLVEGVTKLGTLVFETKEE------VQAENMRKMFLAMSKDIRVLIIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHN+ T++ + K + +ETL+I+ PLA+RLGI + K +LE++ K L+P+ + EL
Sbjct: 139 DRLHNLRTINYMSQDKIKLKCQETLDIYAPLASRLGIYSIKFELEDIALKCLHPETYEEL 198
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ E E + I ++E+ALK I + + GR K YSI+ KM +K ++DEI
Sbjct: 199 KKNVNEKKTEREKAIKDVISEVERALKPLGIEYTIY-GRSKHFYSIYKKMQHQKKSLDEI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY--IFSQVVLSYER 528
D+ +R+IV + DCY L VVH +W +PG+ KDYI PK N Y I + V+ S R
Sbjct: 258 FDLTAIRIIVNEKSDCYAVLGVVHNIWTPIPGRFKDYIAMPKMNMYQSIHTTVIGSIGR 316
>gi|426403554|ref|YP_007022525.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425860222|gb|AFY01258.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 738
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 179/309 (57%), Gaps = 27/309 (8%)
Query: 217 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 276
+ NA LK + KA+ +E+ H GQ+R SG+PY+ H + A +LA + +
Sbjct: 28 YYPNADLK-------IIEKAYSFSEKMHEGQIRRSGEPYISHPLSVAAILADFHLDLDTI 80
Query: 277 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 336
A GLLHDT++D + + I FG +A LV+GV+K+ Q+ + N+ K + + +
Sbjct: 81 ATGLLHDTVEDTAATLEDIRTEFGDVIAHLVDGVTKIGQM----KFKNSHEK--QGENIR 134
Query: 337 TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 395
M +AM D R VL+KLADRLHNM TL+ +P K++R A ETLEI+ PLA R+GIS K+
Sbjct: 135 KMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALETLEIYCPLAGRMGISALKI 194
Query: 396 QLENLCFKHLNPDQHTELSSKLVEC-------FDEAMVTSAIEKLEQALKDKNISFLVLC 448
+LE+LCF++ PD + EL ++ + DE V E L + V
Sbjct: 195 ELEDLCFRYYRPDMYYELVQQIKKTESEQNRYIDEVKVLIGKE-----LNKAGFRYEVY- 248
Query: 449 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 508
GR K L+SI+ KM + + D+++D+ R++VE+ +CY AL +VH LW +PG+ KD+
Sbjct: 249 GRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAECYAALGLVHSLWKPIPGRFKDF 308
Query: 509 ITRPKFNGY 517
I PK N Y
Sbjct: 309 IAMPKANNY 317
>gi|384218336|ref|YP_005609502.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 6]
gi|354957235|dbj|BAL09914.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 6]
Length = 751
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 177/291 (60%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
ED + +A+ A +AH Q RASGDPY H +E A +L + + + A LLHDT++D
Sbjct: 45 EDLLNRAYVYAMKAHGSQTRASGDPYFSHPLEVAAILTDLKLDDATIVAALLHDTIEDTE 104
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I + FG + LVEG++KL +L ++RE +A+ L + LA+AD R +
Sbjct: 105 ATRAEIDQIFGPEIGALVEGLTKLKRLELVSREAK------QAENLRKLLLAIADDVRVL 158
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD +P R+R A+ETL+I+ PLA R+G+ + +LE+L F+ L+P+
Sbjct: 159 LVKLADRLHNMRTLDFVPPESRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRTLDPE 218
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
++ + +L + + ++ ++L L+ + + V GR K +SI KM +K +
Sbjct: 219 AYSVVMQRLDALAERNRNLIGEIEDQLSNNLRHRGLGARV-YGRRKKPFSIWTKMERKSV 277
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DI+G RL+V + E CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 278 GFEQLSDIFGFRLVVNDIEACYRALGIVHTNWPVVPGRFKDYISTPKQNDY 328
>gi|83951638|ref|ZP_00960370.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Roseovarius nubinhibens ISM]
gi|83836644|gb|EAP75941.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Roseovarius nubinhibens ISM]
Length = 723
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 172/289 (59%), Gaps = 11/289 (3%)
Query: 233 VIKAFYEAERA-HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+I+A YE RA H GQ R SG+PY H V A +LA+ + + LLHDT++D S
Sbjct: 22 LIRAAYEYGRAMHEGQFRHSGEPYFSHPVAVAAILASQRLDDATIITALLHDTIEDTRAS 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
Y I FG +ADLV+GV+KL+ L +LA +S+T +A+ +F+AM+ D R +L+
Sbjct: 82 YSSIEEQFGRHIADLVDGVTKLTNL-QLA-----SSETKQAENFRKLFMAMSKDMRVILV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM T+ A+ K+ + A+ET++IF PLA R+G+ + +LE+L F+ +NP+
Sbjct: 136 KLADRLHNMRTIKAMRAEKQLQKARETMDIFAPLAGRMGMQWMREELEDLAFRVINPEAR 195
Query: 411 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + + E+ ++ + L I V GR K YSI KM +K++
Sbjct: 196 ASIMRRFITLQKESGDVIERITGDMRHELDAAGIEAEVF-GRAKKPYSIWRKMREKEIGF 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ DIYG R+I NE DCY L +HQ W VPG+ KDYI++PK NGY
Sbjct: 255 SRLSDIYGFRVITTNEPDCYGVLGAIHQRWRAVPGRFKDYISQPKSNGY 303
>gi|410938453|ref|ZP_11370300.1| putative GTP diphosphokinase [Leptospira noguchii str. 2006001870]
gi|410786378|gb|EKR75322.1| putative GTP diphosphokinase [Leptospira noguchii str. 2006001870]
Length = 680
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +E AH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 35 VQKAYDVSEHAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 94
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 95 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 148
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 149 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 208
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 209 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 263
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 264 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 315
>gi|260599947|ref|YP_003212518.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Cronobacter
turicensis z3032]
gi|260219124|emb|CBA34479.1| Guanosine-3',5'-bis(diphosphate)3'-pyrophosphohydrolase
[Cronobacter turicensis z3032]
Length = 706
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 170/286 (59%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA+LVEGVSKL +L K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKL------KFRDKKEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L+P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEALHPNRYRVI 198
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV++ + CY+ L +H L+ PG+MKDYI PK NGY
Sbjct: 258 MDIYAFRVIVKDVDTCYRVLGQMHSLYKPRPGRMKDYIAIPKANGY 303
>gi|148272990|ref|YP_001222551.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830920|emb|CAN01864.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 749
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 174/306 (56%), Gaps = 12/306 (3%)
Query: 215 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
++ + A+L H + +A+ AERAH GQ R SG+PY+ H V A +LA +G
Sbjct: 29 EQLIRTARLHHPKADMSLIERAYAVAERAHEGQKRKSGEPYITHPVAVAQILADLGIGPK 88
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 334
+AA LLHDT++D + D + FG +A LV+GV+KL +L + +A+
Sbjct: 89 TLAAALLHDTVEDTEYTLDMLRHDFGDEIAMLVDGVTKLDKLK--------YGDSAQAET 140
Query: 335 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 393
+ M +AM+ D R +++KLADRLHN T + +R AKETLEI+ PLA+RLGIST
Sbjct: 141 VRKMVVAMSKDIRVLVVKLADRLHNARTWGFVESASAERKAKETLEIYAPLAHRLGISTI 200
Query: 394 KVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRH 451
K +LE+L F L P + E+ + K E V I+ + L+ I V GR
Sbjct: 201 KWELEDLSFAVLYPKIYVEIENLVKQRTPQREEFVQQVIDSVNDDLRAAKIRGKV-AGRP 259
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K YSI+ KM+ + DEI+D+ G+R++V++ DCY L +H W VPG+ KDYI
Sbjct: 260 KQYYSIYQKMVVRGREFDEIYDLVGIRVLVDSLRDCYAVLGAIHARWTPVPGRFKDYIAT 319
Query: 512 PKFNGY 517
PKFN Y
Sbjct: 320 PKFNLY 325
>gi|116328856|ref|YP_798576.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330538|ref|YP_800256.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116121600|gb|ABJ79643.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124227|gb|ABJ75498.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 674
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|294084105|ref|YP_003550863.1| (p)ppGpp synthetase I [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663678|gb|ADE38779.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 709
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 177/291 (60%), Gaps = 10/291 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D +++AF AH GQ+RASG+ Y H V A +LA +G + V LLHDT++D +
Sbjct: 22 DILMRAFDFGMTAHDGQLRASGEAYYTHPVAVANMLAGMGLDLDTVITALLHDTVEDCDV 81
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
S D I TFGA VA LV+GV+KLS++ + R++ T +A+ + LAM+ D R +L
Sbjct: 82 SLDTIEATFGASVAQLVDGVTKLSRIGEQNRQS-----TAQAENFRKLLLAMSEDVRVLL 136
Query: 350 IKLADRLHNMMTLDALPLC-KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
+KLADR HNM TL +P KR R A+ET+EI+VPLA R+G++ + +LE+ F LNP+
Sbjct: 137 VKLADRTHNMRTLSFIPKAEKRTRIARETMEIYVPLAERIGVTNIQNELEDYAFGVLNPE 196
Query: 409 QHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++L E ++ + +L+ ++ +I V GR K+ YSI KM KK+
Sbjct: 197 MQETIKNRLEYLVTETELIIPTISVELQHVVERHDIECSV-TGRIKTPYSIWRKMQHKKV 255
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
TMD++ DI R++V + E CY+ L VH + V G+ KDYI+ PK NGY
Sbjct: 256 TMDQLADIMAFRVLVPDVESCYRTLGAVHGTYPSVMGRFKDYISTPKRNGY 306
>gi|319651680|ref|ZP_08005807.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
gi|317396747|gb|EFV77458.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
Length = 744
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 182/307 (59%), Gaps = 17/307 (5%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
AKE+L + + V KA+ A+ AHR Q R SG+PY++H ++ A +LA + +
Sbjct: 29 AKEYLNDEHA-------ELVKKAYEFAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDP 81
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
+ VAAG LHD ++D +S + I +F + VA LV+GV+KL ++ ++E +A+
Sbjct: 82 STVAAGFLHDVVEDTEISLENIEESFNSEVAMLVDGVTKLGKIKYKSQEEQ------QAE 135
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MF+AMA D R +LIKLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS
Sbjct: 136 NHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISK 195
Query: 393 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 450
K +LE+ ++LNP Q+ + + K E + I + L + +I + GR
Sbjct: 196 IKWELEDTALRYLNPQQYYRIVNLMKKKRAEREEYLDDVINVMRGRLSEVSIKSEI-SGR 254
Query: 451 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 510
K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI
Sbjct: 255 PKHIYSIYRKMALQNKQFNEIYDLLAVRIVVSSIKDCYAVLGIIHTCWKPMPGRFKDYIA 314
Query: 511 RPKFNGY 517
PK N Y
Sbjct: 315 MPKQNMY 321
>gi|207743761|ref|YP_002260153.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum IPO1609]
gi|206595160|emb|CAQ62087.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum IPO1609]
Length = 793
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 174/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V +AF+ ++ AH GQ R SG+PY+ H V A + A + + A LLHD ++D ++
Sbjct: 94 LVKEAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVT 153
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ FGA VA+LV+G++KL +L +RE +A+ M LAMA D R +L+
Sbjct: 154 KSELAEKFGAKVAELVDGLTKLDKLEFQSREQ------AQAESFRKMLLAMARDVRVILV 207
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADR HNM TLD +P KR+R A ET+EI+ P+A+RLG++T +L+ L F+ +P ++
Sbjct: 208 KLADRTHNMRTLDHVPPEKRRRIAGETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRY 267
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
L K +V+ +E ++AL D I L GR K+LYSI+ KM K+L+
Sbjct: 268 ATLEKAVKAARGNRREVVSRILEAAQRALADAGIP-AELTGREKTLYSIYRKMHDKQLSF 326
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE + CY A+ +H L+ +PGK KDYI PK NGY
Sbjct: 327 SQVLDVYGFRVVVETQMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGY 375
>gi|300703578|ref|YP_003745180.1| bifunctional (p)ppgpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Ralstonia
solanacearum CFBP2957]
gi|421891396|ref|ZP_16322200.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia solanacearum K60-1]
gi|299071241|emb|CBJ42559.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia solanacearum CFBP2957]
gi|378963271|emb|CCF98948.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia solanacearum K60-1]
Length = 761
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 174/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V +AF+ ++ AH GQ R SG+PY+ H V A + A + + A LLHD ++D ++
Sbjct: 62 LVKEAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVT 121
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ FGA VA+LV+G++KL +L +RE +A+ M LAMA D R +L+
Sbjct: 122 KSELAEKFGAKVAELVDGLTKLDKLEFQSREQ------AQAESFRKMLLAMARDVRVILV 175
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADR HNM TLD +P KR+R A ET+EI+ P+A+RLG++T +L+ L F+ +P ++
Sbjct: 176 KLADRTHNMRTLDHVPPEKRRRIAGETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRY 235
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
L K +V+ +E ++AL D I L GR K+LYSI+ KM K+L+
Sbjct: 236 ATLEKAVKAARGNRREVVSRILEAAQRALADAGIP-AELTGREKTLYSIYRKMHDKQLSF 294
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ D+YG R++VE + CY A+ +H L+ +PGK KDYI PK NGY
Sbjct: 295 SQVLDVYGFRVVVETQMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGY 343
>gi|229175081|ref|ZP_04302598.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|423457346|ref|ZP_17434143.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
gi|228608377|gb|EEK65682.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|401147730|gb|EJQ55223.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
Length = 727
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 181/312 (58%), Gaps = 27/312 (8%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 393 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 506 KDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 297 KDYIAMPKANLY 308
>gi|453053369|gb|EMF00835.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 844
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 130 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDD 189
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 190 LRRDFGDQVALLVDGVTKLDRVQ--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 241
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 242 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 301
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 302 VRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 357
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 358 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 406
>gi|260655712|ref|ZP_05861185.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
gi|260629629|gb|EEX47823.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
Length = 762
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 174/288 (60%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +AF A AH QMR G+PY++H V A +LA + + + A LLHD L+D +
Sbjct: 67 VGEAFVFAAGAHGEQMRMGGEPYIIHPVFAASILADMKLDVATLQAALLHDVLEDTECTA 126
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + FG V LV+GV+KL +L E+ +A+ L MFL MA D R VLIK
Sbjct: 127 EQMRERFGEVVTTLVDGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIK 180
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADR HNM +L A+ K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +P+ +
Sbjct: 181 LADRAHNMRSLGAMRRDKQIRTAKETLEIYAPLAHRLGIYQMKRTLEDLAFKYYDPEMYY 240
Query: 412 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
E+ SK+ + EA+V A+E L+ L + I + GR K YSI+ KM +KKL++D
Sbjct: 241 EIKSKVKKRLPEREAVVEQALEILQARLDEMGIKNSI-KGRAKHFYSIYEKMNRKKLSID 299
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++D+ LR+IVE+ CY L VVH +W +PG+ DYI PK N Y
Sbjct: 300 QLYDLLALRVIVEDVAQCYSVLGVVHTIWKPIPGQFDDYIANPKNNMY 347
>gi|297588487|ref|ZP_06947130.1| GTP diphosphokinase [Finegoldia magna ATCC 53516]
gi|297573860|gb|EFH92581.1| GTP diphosphokinase [Finegoldia magna ATCC 53516]
Length = 723
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 176/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ RAH GQ R SG+PY +H + A +LA++ + + AGL HD ++D +
Sbjct: 25 DEITRAYGYMVRAHEGQFRNSGEPYAIHPMAVAKILASLNMDDATIIAGLFHDVVEDTEI 84
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + F +ADLV+GV+KL Q+ +++N +A+ L M LAMA D R ++
Sbjct: 85 TYEDLEYLFSKEIADLVDGVTKLKQIKFKTKKDN------QAENLKKMILAMAKDIRVII 138
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKL+DRLHNM TL+ + K+ A E LEI+ PLA+RLG+ST K +LE+L K+L P+
Sbjct: 139 IKLSDRLHNMRTLEYMTREKQIEKANEVLEIYAPLAHRLGMSTIKWELEDLSLKYLEPNI 198
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ +K+ E E+ + + I + + L+ NI + GR KS++SI+ KM KK L
Sbjct: 199 YQDIVNKINETRQQRESQIQNIIRQFQDELEKYNIKAEIF-GRPKSVFSIYKKMYKKHLA 257
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI D+ +R+IV E +CY L + H+ + +P KDYI PK N Y
Sbjct: 258 FEEIKDLSAIRVIVNKESECYDVLGIAHRFFRPIPNTFKDYIATPKPNMY 307
>gi|322388258|ref|ZP_08061862.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
gi|419844284|ref|ZP_14367580.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
gi|321140930|gb|EFX36431.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
gi|385701999|gb|EIG39153.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 180/294 (61%), Gaps = 12/294 (4%)
Query: 229 RED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
+ED FV KA A H GQ R SG+PY++H ++ A +LA + ++ VA G LHD ++
Sbjct: 22 KEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGFLHDVVE 81
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 345
D + D + R FG V +V+GV+KL ++ + E A + M +AM+ D
Sbjct: 82 DTDATLDDLEREFGHDVRVIVDGVTKLGKVEYKSIEEQLA------ENHRKMLMAMSEDI 135
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R +L+KL+DRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++L
Sbjct: 136 RVILVKLSDRLHNMRTLTHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLSFRYL 195
Query: 406 NPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
NP + +++ + E EA+V + KLE+ ++N++ + GR K +YSI+ KM
Sbjct: 196 NPTEFYKITHMMKEKRQEREALVDEVVTKLEEYSSERNLTGKIY-GRPKHIYSIYRKMQD 254
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
KK +EI+D+ +R I++ + D Y L VH+LW +PG+ KDYI K NGY
Sbjct: 255 KKKRFEEIYDLIAIRCILDTQSDVYAMLGYVHELWKPMPGRFKDYIANRKANGY 308
>gi|433455625|ref|ZP_20413702.1| (p)ppGpp synthetase I SpoT/RelA [Arthrobacter crystallopoietes
BAB-32]
gi|432197381|gb|ELK53766.1| (p)ppGpp synthetase I SpoT/RelA [Arthrobacter crystallopoietes
BAB-32]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 175/297 (58%), Gaps = 20/297 (6%)
Query: 229 REDF--VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
REDF + +AF AER+HRGQ R SGDPY+ H V A +LA +G T +AA LLHDT++
Sbjct: 32 REDFDLIHRAFVIAERSHRGQKRKSGDPYITHPVAVATILAELGMTGTTLAAALLHDTVE 91
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 345
D + D + FG VA LV+GV+KL ++ +++ + M +AMA D
Sbjct: 92 DTEYTLDQLRSEFGPEVAMLVDGVTKLDKVQ--------FGDAAQSETVRKMVVAMAKDI 143
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R ++IKLADRLHN T + + A+ETLEIF PLA+RLG++T K +LE+L F L
Sbjct: 144 RVLVIKLADRLHNARTWRFVSPESSAKKARETLEIFAPLAHRLGMNTIKWELEDLSFAAL 203
Query: 406 NPDQHTELSSKLVECFDE-----AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCK 460
+P + E+ + + E M+ + I +A+K K + GR K YSI+ K
Sbjct: 204 HPKVYEEIVRMVGDRTPEREKYLTMLRTKIGDDLRAVKIKA----TITGRPKHYYSIYQK 259
Query: 461 MLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
M+ + D+IHD+ G+R++VE+ DCY AL +H W +PG+ KDYI PKFN Y
Sbjct: 260 MIVRGKDFDDIHDLMGIRVLVESVRDCYAALGALHSRWNPLPGRFKDYIAMPKFNMY 316
>gi|166031162|ref|ZP_02233991.1| hypothetical protein DORFOR_00848 [Dorea formicigenerans ATCC
27755]
gi|166029009|gb|EDR47766.1| RelA/SpoT family protein [Dorea formicigenerans ATCC 27755]
Length = 803
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 183/287 (63%), Gaps = 11/287 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A++AH Q R SG+PY++H + A++LA + + + A LLHD ++D + DY
Sbjct: 92 KAYNLAKKAHGDQKRKSGEPYIIHPLWVAIILADLEMDKETIIAALLHDVVEDTRIGEDY 151
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKL 352
I FG VA LV+GV+KL +++ +A K ++A+ L MFLAMA D R ++IKL
Sbjct: 152 IKEEFGEEVALLVDGVTKLGRVA------YSADKLELQAENLRKMFLAMAKDIRVIIIKL 205
Query: 353 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 412
ADRLHNM TL + K+Q A+ET++I+ P+A RLGIS K +L++L K+L PD +
Sbjct: 206 ADRLHNMRTLQFMTPAKQQEKARETMDIYAPIAGRLGISKIKTELDDLSLKYLKPDVFFD 265
Query: 413 LSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
L +++ + E V ++++ +K+ I V GR K +SI+ KM+ + T+D+
Sbjct: 266 LVNQINARKTEREEFVQQIVDEVSMHMKNAGIKADV-NGRVKHFFSIYKKMVNQDKTVDQ 324
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I+D++ +R+IV++ +DCY AL ++H+++ +PG+ KDYI PK N Y
Sbjct: 325 IYDLFAVRIIVDSVKDCYAALGIIHEIYTPIPGRFKDYIAMPKPNMY 371
>gi|398333292|ref|ZP_10517997.1| GTP pyrophosphokinase [Leptospira alexanderi serovar Manhao 3 str.
L 60]
Length = 674
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|401684009|ref|ZP_10815892.1| GTP diphosphokinase [Streptococcus sp. BS35b]
gi|418974870|ref|ZP_13522779.1| RelA/SpoT family protein [Streptococcus oralis SK1074]
gi|419783424|ref|ZP_14309212.1| GTP diphosphokinase [Streptococcus oralis SK610]
gi|383182308|gb|EIC74866.1| GTP diphosphokinase [Streptococcus oralis SK610]
gi|383348241|gb|EID26200.1| RelA/SpoT family protein [Streptococcus oralis SK1074]
gi|400186314|gb|EJO20526.1| GTP diphosphokinase [Streptococcus sp. BS35b]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 182/302 (60%), Gaps = 12/302 (3%)
Query: 221 AQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAA 278
A K + +ED FV KA A H GQ R SG+PY++H ++ A +LA + ++ VA
Sbjct: 14 ALTKEYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVAC 73
Query: 279 GLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTM 338
G LHD ++D + D + R FG V +V+GV+KL ++ + E A + M
Sbjct: 74 GFLHDVVEDTDATLDDLEREFGHDVRIIVDGVTKLGKVEYKSLEEQLA------ENHRKM 127
Query: 339 FLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 397
+AM+ D R +L+KL+DRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +L
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 398 ENLCFKHLNPDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLY 455
E+L F++LNP + +++ + E EA+V + KLE+ ++N+ + GR K +Y
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDEVVTKLEEYATERNLKGKIY-GRPKHIY 246
Query: 456 SIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFN 515
SI+ KM KK +EI+D+ +R I++ + D Y L VH+LW +PG+ KDYI K N
Sbjct: 247 SIYRKMQDKKKRFEEIYDLIAIRCILDTQSDVYAMLGYVHELWKPMPGRFKDYIANRKAN 306
Query: 516 GY 517
GY
Sbjct: 307 GY 308
>gi|270157353|ref|ZP_06186010.1| guanosine-3, 5-bis(diphosphate)-3-pyrophosphohydrolase SpoT
[Legionella longbeachae D-4968]
gi|269989378|gb|EEZ95632.1| guanosine-3, 5-bis(diphosphate)-3-pyrophosphohydrolase SpoT
[Legionella longbeachae D-4968]
Length = 708
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 175/286 (61%), Gaps = 9/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AE+AH+GQ R SG+PY+ H V A++LA + + + A LLHD ++D +S +
Sbjct: 25 QAYLVAEKAHQGQTRRSGEPYITHPVAAALILARMRLDYQTIMATLLHDVVEDTAVSKED 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG V LV+GV+KL+++ + +A+ M LAM D R +++KLA
Sbjct: 85 LTRQFGEEVTSLVDGVTKLTKI------KFESKAEAQAENFRKMVLAMVKDIRVIIVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL A+P KR+R A ETLEI+ P+ANRLG+ + V LE+L F+ L P ++ +
Sbjct: 139 DRLHNMKTLGAMPYAKRRRIAIETLEIYAPIANRLGMHSIYVGLEDLGFQALYPMRYRAI 198
Query: 414 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S + + + +T IE+ L+ AL NI + + GR K LYSI+ KM +KK + EI
Sbjct: 199 KSAVEKSRGNRRELTQTIERDLQLALAQLNIPYEQVFGRQKHLYSIYRKMRQKKASFTEI 258
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D++ R+I E+ + CY+ L +H + VP + KDYI PK NGY
Sbjct: 259 TDVFAFRVITEDIDSCYRILGALHCTYKPVPQRFKDYIGIPKANGY 304
>gi|256828245|ref|YP_003156973.1| (p)ppGpp synthetase I SpoT/RelA [Desulfomicrobium baculatum DSM
4028]
gi|256577421|gb|ACU88557.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfomicrobium baculatum DSM
4028]
Length = 715
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 174/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ + AH GQ+R SG+PYL H +E + +L + ++ + AGLLHDT++D +S
Sbjct: 22 LIQKAYVFSAAAHAGQIRLSGEPYLSHPLEVSNILVDLRLDAATIVAGLLHDTVEDTEVS 81
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLI 350
I FG V +VEGV+K+S++ N + + +A+ + M LAMAD R +L+
Sbjct: 82 IPQIVELFGPEVGAIVEGVTKISKM------NFESKEQAQAENIRKMILAMADDIRVILV 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHN+ TL+ K++ A+ETL I+ PLANRLG+ KVQLEN +++ PD +
Sbjct: 136 KLADRLHNISTLEFQKEYKQRAIAQETLGIYAPLANRLGLYRIKVQLENYGLRYMKPDVY 195
Query: 411 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++S + D+ A + ++ L + I+ V GR K YSI+ KM ++ LT+
Sbjct: 196 AQISEGINRYQDQGQAYIDKVSAMIQDVLAENEINGRV-KGRIKHTYSIYHKMKQRGLTL 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+I D+ R+IV N +CY L +VH LW VPGK KDYI+ PK N Y
Sbjct: 255 DQIFDMIAFRVIVNNLRECYTVLGLVHSLWKPVPGKFKDYISMPKANMY 303
>gi|311031524|ref|ZP_07709614.1| GTP pyrophosphokinase [Bacillus sp. m3-13]
Length = 732
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 176/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
F+ +A+ A+ AH Q R SG+PY++H ++ A +L + + + +AAG LHD ++D ++
Sbjct: 27 FLERAYEFAKNAHAEQYRKSGEPYIIHPIQVAGILVDLDLDPSTIAAGFLHDVVEDTSVT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ I F A VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LEEIKEAFNAEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 411 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ + K E ++ + ++ L++ I+ L GR K +YSI+ KM K+
Sbjct: 201 YRIVNLMKRKRAEREEYISEVMNEVNDRLEEVEIT-AELSGRPKHIYSIYRKMAKQNKQF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 260 SEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMY 308
>gi|75760574|ref|ZP_00740607.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491943|gb|EAO55126.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 181/312 (58%), Gaps = 27/312 (8%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 393 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 506 KDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 297 KDYIAMPKANLY 308
>gi|456865837|gb|EMF84149.1| putative GTP diphosphokinase [Leptospira weilii serovar Topaz str.
LT2116]
Length = 674
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|229163355|ref|ZP_04291307.1| GTP pyrophosphokinase [Bacillus cereus R309803]
gi|228620136|gb|EEK77010.1| GTP pyrophosphokinase [Bacillus cereus R309803]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 181/312 (58%), Gaps = 27/312 (8%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A ++LAN + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLANEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEVTLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGI+T
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINT 182
Query: 393 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 506 KDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 297 KDYIAMPKANLY 308
>gi|89053005|ref|YP_508456.1| (p)ppGpp synthetase I SpoT/RelA [Jannaschia sp. CCS1]
gi|88862554|gb|ABD53431.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) SpoT/RelA [Jannaschia
sp. CCS1]
Length = 722
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 10/292 (3%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
RE + AF R H GQ R SG+PY H V A +L + + LLHDT++D
Sbjct: 34 RESLIRDAFAYGARMHDGQTRHSGEPYFTHPVAVAAILTEQQLDDATIVTALLHDTIEDT 93
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+Y + + FG +A+L++GV+KL+ L RE+ +A+ +F+AM+ D R
Sbjct: 94 RSTYGEVAKHFGPEIAELIDGVTKLTNLQLSNRESK------QAENFRKLFMAMSKDLRV 147
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM T+ + K+++ A+ET++I+ PLA R+G+ + +LE+L F+ LNP
Sbjct: 148 ILVKLADRLHNMRTIRHMRPDKQKQKAQETMDIYAPLAGRMGMHWMREELEDLSFRVLNP 207
Query: 408 DQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
+ + + + + E + + +E L + + V GR K YSI KM +KK
Sbjct: 208 EARSSILRRFITLQKETGDAIPKISDDIETVLNKRGVHADVY-GRAKKPYSIWRKMQEKK 266
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
L + DIYG R+I E E+DCY+ L +HQ W VPG+ KDYI++PK NGY
Sbjct: 267 LAFSRLSDIYGFRVITETEDDCYRVLGAIHQRWKSVPGRFKDYISQPKSNGY 318
>gi|429758836|ref|ZP_19291349.1| GTP diphosphokinase [Actinomyces sp. oral taxon 181 str. F0379]
gi|429173050|gb|EKY14587.1| GTP diphosphokinase [Actinomyces sp. oral taxon 181 str. F0379]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 170/289 (58%), Gaps = 12/289 (4%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ +A+ AE+AHRGQMR SG+PY+ H V A +LA +G S +AA LLHDT++D S
Sbjct: 24 LIERAYATAEKAHRGQMRKSGEPYITHPVAVATILAEVGMTSPTLAAALLHDTVEDTDYS 83
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + FG +A LV+GV+KL ++ R +++ L M +AM+ D R +LI
Sbjct: 84 LEQLTADFGPAIAQLVDGVTKLDKIRYGER--------AQSETLRKMIIAMSRDIRVLLI 135
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHN T +P+ ++ A+ETLEI+ PLA+RLG++ K +LE FK L P+ +
Sbjct: 136 KLADRLHNARTWRFVPVESAKKKARETLEIYAPLAHRLGMNMIKWELEERSFKILYPEIY 195
Query: 411 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
E+ + E E + I ++E+ L+ V GR K+ YSI+ KM+ +
Sbjct: 196 EEIDHLVAERAPERDLYLREVISQIEEDLRRSGTQGTV-TGRPKNHYSIYQKMIVRNKAF 254
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI D+ +R++VE DCY L +H W +PG+ KDYI PKFN Y
Sbjct: 255 DEIFDLVAVRVLVETVRDCYAVLGALHGRWNPIPGRFKDYIAMPKFNFY 303
>gi|30022482|ref|NP_834113.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218232359|ref|YP_002369216.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218899576|ref|YP_002447987.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228902935|ref|ZP_04067076.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|228910243|ref|ZP_04074061.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228941575|ref|ZP_04104123.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228960680|ref|ZP_04122324.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228967483|ref|ZP_04128511.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974504|ref|ZP_04135071.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981098|ref|ZP_04141399.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|229048116|ref|ZP_04193687.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|229111879|ref|ZP_04241425.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|229129687|ref|ZP_04258655.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|229146978|ref|ZP_04275340.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|229152610|ref|ZP_04280799.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|296504899|ref|YP_003666599.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|384188479|ref|YP_005574375.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564115|ref|YP_006606839.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|410676793|ref|YP_006929164.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|423358556|ref|ZP_17336059.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|423385906|ref|ZP_17363162.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|423527737|ref|ZP_17504182.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|423561125|ref|ZP_17537401.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|423585115|ref|ZP_17561202.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|423631131|ref|ZP_17606878.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|423640514|ref|ZP_17616132.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|423650270|ref|ZP_17625840.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|423657360|ref|ZP_17632659.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|434377574|ref|YP_006612218.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|452200870|ref|YP_007480951.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29898040|gb|AAP11314.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218160316|gb|ACK60308.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218543265|gb|ACK95659.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228630871|gb|EEK87511.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|228636475|gb|EEK92943.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|228653804|gb|EEL09674.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|228671635|gb|EEL26933.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|228723219|gb|EEL74593.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|228778639|gb|EEM26905.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|228785221|gb|EEM33233.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228792198|gb|EEM39772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228798986|gb|EEM45959.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228818082|gb|EEM64159.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228849407|gb|EEM94243.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228856719|gb|EEN01238.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|296325951|gb|ADH08879.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|326942188|gb|AEA18084.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084428|gb|EJP92674.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|401202179|gb|EJR09041.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|401233758|gb|EJR40244.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|401264498|gb|EJR70610.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|401279575|gb|EJR85497.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|401282688|gb|EJR88587.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|401290103|gb|EJR95807.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|401635962|gb|EJS53717.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|401792767|gb|AFQ18806.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|401876131|gb|AFQ28298.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|402451400|gb|EJV83219.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|409175922|gb|AFV20227.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|452106263|gb|AGG03203.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 181/312 (58%), Gaps = 27/312 (8%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 393 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 506 KDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 297 KDYIAMPKANLY 308
>gi|49481489|ref|YP_038457.1| GTP diphosphokinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228987658|ref|ZP_04147772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|49333045|gb|AAT63691.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228772118|gb|EEM20570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 174/295 (58%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>gi|301055915|ref|YP_003794126.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
gi|300378084|gb|ADK06988.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 174/295 (58%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>gi|229186646|ref|ZP_04313807.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
gi|228596905|gb|EEK54564.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 174/295 (58%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>gi|359727202|ref|ZP_09265898.1| GTP pyrophosphokinase [Leptospira weilii str. 2006001855]
gi|417779516|ref|ZP_12427301.1| putative GTP diphosphokinase [Leptospira weilii str. 2006001853]
gi|410780345|gb|EKR64939.1| putative GTP diphosphokinase [Leptospira weilii str. 2006001853]
Length = 674
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 351
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 412 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 465
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 466 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N Y
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMY 309
>gi|116490651|ref|YP_810195.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni PSU-1]
gi|290890065|ref|ZP_06553148.1| hypothetical protein AWRIB429_0538 [Oenococcus oeni AWRIB429]
gi|419758622|ref|ZP_14284937.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB304]
gi|419857019|ref|ZP_14379733.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB202]
gi|419858563|ref|ZP_14381234.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|421184442|ref|ZP_15641865.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB318]
gi|421188651|ref|ZP_15645987.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB419]
gi|421193977|ref|ZP_15651217.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB553]
gi|421194238|ref|ZP_15651460.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB568]
gi|421197168|ref|ZP_15654348.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB576]
gi|116091376|gb|ABJ56530.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni PSU-1]
gi|290480256|gb|EFD88897.1| hypothetical protein AWRIB429_0538 [Oenococcus oeni AWRIB429]
gi|399904650|gb|EJN92103.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB304]
gi|399964824|gb|EJN99458.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB419]
gi|399967156|gb|EJO01639.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB318]
gi|399970443|gb|EJO04736.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB553]
gi|399975682|gb|EJO09718.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB576]
gi|399978250|gb|EJO12206.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB568]
gi|410498511|gb|EKP89961.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|410498678|gb|EKP90126.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB202]
Length = 748
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 186/320 (58%), Gaps = 17/320 (5%)
Query: 201 MEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCV 260
+E+ E + Y K +LA Q+K V A+ A++ H GQ R SG+ Y+ H +
Sbjct: 4 IENRSFEDVHDIYVK-YLAPDQVKR-------VDSAYQLAKKMHAGQKRKSGEDYIYHPI 55
Query: 261 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 320
+ A +LA + + +AAG LHD ++D + D I + +G VAD+V+GV+KL ++ +
Sbjct: 56 QVAGILADLKMDPDTIAAGFLHDVVEDTPETNDEIRQNYGDDVADIVDGVTKLGRIHYES 115
Query: 321 RENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLE 379
E N A + LAMA D R +++KLADRLHNM TL K+ R A ETL+
Sbjct: 116 TEENMAENH------RKLLLAMAKDVRVIIVKLADRLHNMRTLQVHRPEKQHRIASETLD 169
Query: 380 IFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQAL 437
I+ PLA+RLG++ K +LE+L ++L+PD++ ++ + +E A + SA +++E+ +
Sbjct: 170 IYAPLAHRLGLANIKWELEDLSLRYLDPDEYHRIAKMMHSRREERDADIASATKQIEKVI 229
Query: 438 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 497
D I + GR K +YSI+ KM K EI+D+ +R++V++ DCY AL +H
Sbjct: 230 SDLKIGHFEVTGRPKHIYSIYRKMTDKHKQFSEIYDLLAIRVLVDSVADCYAALGTIHAN 289
Query: 498 WAEVPGKMKDYITRPKFNGY 517
W +PG+ KDYI PK NGY
Sbjct: 290 WKPLPGRFKDYIALPKPNGY 309
>gi|406909576|gb|EKD49800.1| hypothetical protein ACD_63C00043G0001, partial [uncultured
bacterium]
Length = 445
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/314 (40%), Positives = 182/314 (57%), Gaps = 15/314 (4%)
Query: 213 YAKEFLANAQLKH-----KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 267
YAK F NA + + F + F AE+ HRGQ R +G+PY++H +ET L
Sbjct: 10 YAKYFDINAIIDEIGKYLQNFDSKKFLSVFEFAEKHHRGQARKNGEPYIVHPIETIKTLI 69
Query: 268 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 327
+ A+ + A LLHD +D + I FG VA LV+G++KLS K+ ++
Sbjct: 70 KLHADEDTLIAALLHDVPEDTEGDLNQIKELFGEKVAFLVDGITKLS---KVYYRHDMEE 126
Query: 328 KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLC-KRQRFAKETLEIFVPLA 385
+ +E+ L + + A D R +LIKLADRLHNM TL+ + KR+R +KETLEI+VP+A
Sbjct: 127 RQIES--LKKLLIHTAKDPRVILIKLADRLHNMQTLEFISKPEKRERISKETLEIYVPIA 184
Query: 386 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNIS 443
N LGI K LE+LCFK L P+ + +L K+ + + ++ I+ ++Q LK I
Sbjct: 185 NLLGIQDLKANLEDLCFKFLYPEDYEKLREKVSSTMERYKGVLDEMIKMIKQELKKHEIR 244
Query: 444 FLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 503
V GR K LYSI+ K+ + T+D+IHD LR+I +N+ DCY AL + H ++ PG
Sbjct: 245 AKV-YGREKGLYSIYKKIKSENKTIDDIHDRLALRIITKNKPDCYTALGITHDIFNPKPG 303
Query: 504 KMKDYITRPKFNGY 517
K KDYI PK NGY
Sbjct: 304 KFKDYIAVPKINGY 317
>gi|346307058|ref|ZP_08849203.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
4_6_53AFAA]
gi|345907004|gb|EGX76722.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
4_6_53AFAA]
Length = 781
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 183/287 (63%), Gaps = 11/287 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
KA+ A++AH Q R SG+PY++H + A++LA + + + A LLHD ++D + DY
Sbjct: 70 KAYNLAKKAHGDQKRKSGEPYIIHPLWVAIILADLEMDKETIIAALLHDVVEDTQIGEDY 129
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKL 352
I FG VA LV+GV+KL +++ +A K ++A+ L MFLAMA D R ++IKL
Sbjct: 130 IKEEFGEEVALLVDGVTKLGRVA------YSADKLELQAENLRKMFLAMAKDIRVIIIKL 183
Query: 353 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 412
ADRLHNM TL + K+Q A+ET++I+ P+A RLGIS K +L++L K+L PD +
Sbjct: 184 ADRLHNMRTLQFMTPAKQQEKARETMDIYAPIAGRLGISKIKTELDDLSLKYLKPDVFFD 243
Query: 413 LSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 470
L +++ + E V ++++ +K+ I V GR K +SI+ KM+ + T+D+
Sbjct: 244 LVNQINARKTEREEFVQQIVDEVSMHMKNAGIKADV-NGRVKHFFSIYKKMVNQDKTVDQ 302
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
I+D++ +R+IV++ +DCY AL ++H+++ +PG+ KDYI PK N Y
Sbjct: 303 IYDLFAVRIIVDSVKDCYAALGIIHEIYTPIPGRFKDYIAMPKPNMY 349
>gi|47566596|ref|ZP_00237418.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118479564|ref|YP_896715.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|196034529|ref|ZP_03101938.1| GTP diphosphokinase [Bacillus cereus W]
gi|196039332|ref|ZP_03106638.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|196044908|ref|ZP_03112142.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|206975952|ref|ZP_03236862.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217961898|ref|YP_002340468.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218905602|ref|YP_002453436.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|222097852|ref|YP_002531909.1| gtp diphosphokinase (gtp pyrophosphokinase) [Bacillus cereus Q1]
gi|225866388|ref|YP_002751766.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228917043|ref|ZP_04080603.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929452|ref|ZP_04092473.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935727|ref|ZP_04098540.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948121|ref|ZP_04110405.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229093478|ref|ZP_04224581.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|229123948|ref|ZP_04253140.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|229141146|ref|ZP_04269687.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|229158022|ref|ZP_04286093.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|229198534|ref|ZP_04325238.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|254724667|ref|ZP_05186450.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus anthracis
str. A1055]
gi|375286411|ref|YP_005106850.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|376268304|ref|YP_005121016.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|423354899|ref|ZP_17332524.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|423373632|ref|ZP_17350971.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|423549853|ref|ZP_17526180.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|423570646|ref|ZP_17546891.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|423573914|ref|ZP_17550033.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|423603933|ref|ZP_17579826.1| GTP pyrophosphokinase [Bacillus cereus VD102]
gi|47556626|gb|EAL14958.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118418789|gb|ABK87208.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|195993071|gb|EDX57030.1| GTP diphosphokinase [Bacillus cereus W]
gi|196024396|gb|EDX63069.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|196029959|gb|EDX68560.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|206745704|gb|EDZ57101.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217066579|gb|ACJ80829.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218537532|gb|ACK89930.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|221241910|gb|ACM14620.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus Q1]
gi|225788454|gb|ACO28671.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228585037|gb|EEK43151.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|228625475|gb|EEK82231.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|228642309|gb|EEK98599.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|228659250|gb|EEL14898.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|228689949|gb|EEL43753.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|228811479|gb|EEM57816.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228823965|gb|EEM69784.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830240|gb|EEM75856.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842650|gb|EEM87738.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|358354938|dbj|BAL20110.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|364514104|gb|AEW57503.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|401085783|gb|EJP94019.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|401095836|gb|EJQ03889.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|401189469|gb|EJQ96519.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|401203557|gb|EJR10394.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|401212483|gb|EJR19226.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|401245619|gb|EJR51972.1| GTP pyrophosphokinase [Bacillus cereus VD102]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 174/295 (58%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>gi|169824507|ref|YP_001692118.1| GTP pyrophosphokinase [Finegoldia magna ATCC 29328]
gi|302380745|ref|ZP_07269210.1| putative GTP diphosphokinase [Finegoldia magna ACS-171-V-Col3]
gi|303233691|ref|ZP_07320345.1| putative GTP diphosphokinase [Finegoldia magna BVS033A4]
gi|417926542|ref|ZP_12569940.1| GTP diphosphokinase [Finegoldia magna SY403409CC001050417]
gi|167831312|dbj|BAG08228.1| GTP pyrophosphokinase [Finegoldia magna ATCC 29328]
gi|302311688|gb|EFK93704.1| putative GTP diphosphokinase [Finegoldia magna ACS-171-V-Col3]
gi|302495125|gb|EFL54877.1| putative GTP diphosphokinase [Finegoldia magna BVS033A4]
gi|341589057|gb|EGS32424.1| GTP diphosphokinase [Finegoldia magna SY403409CC001050417]
Length = 723
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 176/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
D + +A+ RAH GQ R SG+PY +H + A +LA++ + + AGL HD ++D +
Sbjct: 25 DEITRAYGYMVRAHEGQFRNSGEPYAIHPMAVAKILASLNMDDATIIAGLFHDVVEDTEI 84
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+Y+ + F +ADLV+GV+KL Q+ +++N +A+ L M LAMA D R ++
Sbjct: 85 TYEDLEYLFSKEIADLVDGVTKLKQIKFKTKKDN------QAENLKKMILAMAKDIRVII 138
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKL+DRLHNM TL+ + K+ A E LEI+ PLA+RLG+ST K +LE+L K+L P+
Sbjct: 139 IKLSDRLHNMRTLEYMTREKQIEKANEVLEIYAPLAHRLGMSTIKWELEDLSLKYLEPNI 198
Query: 410 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ ++ +K+ E E+ + + I + + L+ NI + GR KS++SI+ KM KK L
Sbjct: 199 YQDIVNKINETRQQRESQIQNIIRQFQNELEKCNIKAEIF-GRPKSIFSIYKKMYKKHLA 257
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+EI D+ +R+IV E +CY L + H+ + +P KDYI PK N Y
Sbjct: 258 FEEIKDLSAIRVIVNKESECYDVLGIAHRFFRPIPNTFKDYIATPKPNMY 307
>gi|335046678|ref|ZP_08539701.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|363896423|ref|ZP_09322974.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
gi|333760464|gb|EGL38021.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|361960709|gb|EHL13942.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
Length = 755
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 186/293 (63%), Gaps = 17/293 (5%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
+ KA+ A+ H+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 42 MITKAYEVAKEQHKEQKRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTGMT 101
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
+ + + F VA LV+GV+KL++L+ N+ ++A+ L MF++MA D R ++I
Sbjct: 102 LEEVEKEFNPDVATLVDGVTKLTKLNL-----NSDKVEMQAENLRKMFVSMAKDIRVIII 156
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHN+ TL+ KR+ A+E+LEI+ PLA+RLGIS K+++++L K+L P+ +
Sbjct: 157 KLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLADRLGISKIKIEMDDLSLKYLEPEVY 216
Query: 411 TELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+L+ K+ E A+V E +E++ + NI GR K +SI+ KM+ +
Sbjct: 217 YDLADKVHFKREAREDRINAIVEEVREHIEESGIEANIK-----GRIKHFFSIYKKMVNQ 271
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
T+D+I+D++ +R+IVE+ DCY L V+H+++ +PG+ KDYI PK N Y
Sbjct: 272 NKTIDQIYDLFAIRIIVESVRDCYAVLGVIHKMYRPIPGRFKDYIAMPKPNMY 324
>gi|421276618|ref|ZP_15727439.1| GTP diphosphokinase [Streptococcus mitis SPAR10]
gi|395876824|gb|EJG87896.1| GTP diphosphokinase [Streptococcus mitis SPAR10]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 180/294 (61%), Gaps = 12/294 (4%)
Query: 229 RED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
+ED FV KA A H GQ R SG+PY++H ++ A +LA + ++ VA G LHD ++
Sbjct: 22 KEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGFLHDVVE 81
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 345
D + D + R FG V +V+GV+KL ++ + E A + M +AM+ D
Sbjct: 82 DTDATLDDLEREFGHDVRVIVDGVTKLGKVEYKSIEEQLA------ENHRKMLMAMSEDI 135
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R +L+KL+DRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++L
Sbjct: 136 RVILVKLSDRLHNMRTLTHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLSFRYL 195
Query: 406 NPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
NP + +++ + E EA+V + KLE+ ++N++ + GR K +YSI+ KM
Sbjct: 196 NPTEFYKITHMMKEKRQEREALVDEVVTKLEEYSSERNLTGKIY-GRPKHIYSIYRKMQD 254
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
KK +EI+D+ +R I++ + D Y L VH+LW +PG+ KDYI K NGY
Sbjct: 255 KKKRFEEIYDLIAIRCILDTQSDVYAMLGYVHELWKPMPGRFKDYIANRKANGY 308
>gi|373106414|ref|ZP_09520717.1| RelA/SpoT family protein [Stomatobaculum longum]
gi|371652789|gb|EHO18197.1| RelA/SpoT family protein [Stomatobaculum longum]
Length = 754
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 187/306 (61%), Gaps = 9/306 (2%)
Query: 215 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 274
+E +A + H + +A+ A+ AH Q R SG+PY++H + A++LA + +
Sbjct: 23 EELIAAIERYHPSDDTSLIHRAYMTAKNAHMDQKRKSGEPYIIHPLCVAIILADLELDKE 82
Query: 275 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 334
+ AGLLHD ++D L+ + I R FG VA LV+GV+KL+Q++ T ++A+
Sbjct: 83 TIIAGLLHDVVEDTILTREQISRVFGEDVAVLVDGVTKLTQITW-----TTDKLDIQAEN 137
Query: 335 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 393
L MFLAM+ D R +LIKLADRLHNM TL + K++ AKETLEI+ PLA+RLGIS
Sbjct: 138 LRKMFLAMSQDIRVILIKLADRLHNMRTLQHMRPEKQREKAKETLEIYAPLADRLGISRL 197
Query: 394 KVQLENLCFKHLNPDQHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRH 451
KV+L++L ++L P + +L K+ E E ++ + I +++ + I V+ GR
Sbjct: 198 KVELDDLALRYLEPKAYRDLEEKIEEKSHSTERLLETIIAEVQGIMNSSKIPSSVI-GRR 256
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K ++SI+ KM+ + T DEI+D++ +R++V++ DCY AL +H + + + KDYI R
Sbjct: 257 KHIFSIYKKMVNQHKTFDEIYDLFAVRVLVQDLNDCYAALGQLHVHFTPLSERFKDYIAR 316
Query: 512 PKFNGY 517
PK N Y
Sbjct: 317 PKPNRY 322
>gi|326329825|ref|ZP_08196145.1| GTP diphosphokinase [Nocardioidaceae bacterium Broad-1]
gi|325952411|gb|EGD44431.1| GTP diphosphokinase [Nocardioidaceae bacterium Broad-1]
Length = 771
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 170/286 (59%), Gaps = 12/286 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER H QMR SGDPY+ H + +LA +G + A LLHDT++D +
Sbjct: 69 RAYVTAERLHGTQMRKSGDPYITHPLAVTTILAELGMTEPTLVAALLHDTVEDTPYTLKE 128
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ R FG VA LV+GV+KL ++ T + +A+ + M +AM+ D R ++IKLA
Sbjct: 129 LTRDFGEEVAHLVDGVTKLDKV--------TYGDSAQAETIRKMVVAMSRDIRVLVIKLA 180
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL +P ++R A+ETL+I+ PLA+RLG++T K +LE+L F L P + EL
Sbjct: 181 DRLHNMRTLRYVPQKSQERSARETLDIYAPLAHRLGMNTIKFELEDLAFATLYPKMYDEL 240
Query: 414 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
+ + E + I+++E+ L D I V GR K YSI+ KM+ +I
Sbjct: 241 VRLVADRNPSREKFLAQVIDQVERDLHDARIKATV-TGRPKHYYSIYQKMIVGGKDFSDI 299
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+D+ G+R++VE+E DCY L ++H W V G+ KDYI PKFN Y
Sbjct: 300 NDLVGIRILVEDERDCYSVLGILHSRWNPVLGRFKDYIAMPKFNMY 345
>gi|265983775|ref|ZP_06096510.1| GTP pyrophosphokinase [Brucella sp. 83/13]
gi|306837514|ref|ZP_07470389.1| RelA/SpoT family protein [Brucella sp. NF 2653]
gi|264662367|gb|EEZ32628.1| GTP pyrophosphokinase [Brucella sp. 83/13]
gi|306407406|gb|EFM63610.1| RelA/SpoT family protein [Brucella sp. NF 2653]
Length = 750
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 179/306 (58%), Gaps = 12/306 (3%)
Query: 216 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 275
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEAT 65
Query: 276 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 335
+A LLHDT++D + I + FG + LVEG++KL +L +++ K V+A+ L
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSK------KAVQAENL 119
Query: 336 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 394
+ LA++ D R +L+KLADRLHNM TL + KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMR 179
Query: 395 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALK---DKNISFLVLCGRH 451
+LE L F+++NPD ++ +L E ++ ++K+E L +KN + R
Sbjct: 180 EELEELAFRYINPDAWRAVTDRLAELLEKN--RGLLQKIETDLSEIFEKNGIKASVKSRQ 237
Query: 452 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 511
K +S+ CKM K L+ +++ DI+G R++V+ +DCY+AL ++H W+ VPG+ KDYI+
Sbjct: 238 KKPWSVFCKMETKGLSFEQLSDIFGFRVMVDTVQDCYRALGLIHTTWSMVPGRFKDYIST 297
Query: 512 PKFNGY 517
PK N Y
Sbjct: 298 PKQNDY 303
>gi|170738398|ref|YP_001767053.1| (p)ppGpp synthetase I SpoT/RelA [Methylobacterium sp. 4-46]
gi|168192672|gb|ACA14619.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium sp. 4-46]
Length = 733
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 173/286 (60%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A RAH QMRASGD + H +E A +L + + + A +LHDT++D + +
Sbjct: 25 RAYVYAMRAHGSQMRASGDLFFAHPLEVAAILTDLRVDDATIVAAVLHDTVEDTAATLEE 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I RTF + LV+G++K+ +L ++++ + + + LA+A D R +L+KLA
Sbjct: 85 INRTFSPEIGTLVDGLTKIKRLDLVSKQ------AAQGENFRKLLLAIAADVRVLLVKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL +P KR R A+ETL+I+ PLA+R+G+ + +LE+L F++L PD + +
Sbjct: 139 DRLHNMRTLQHMPPEKRVRIAQETLDIYAPLASRMGMQELREELEDLSFRNLKPDVYATI 198
Query: 414 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
S +L + E +V S L Q L K I V GR K YSI KM +K + +++
Sbjct: 199 SRRLDDLTAKSERLVESIERDLVQRLAAKGIVAKV-KGRQKRPYSIWSKMERKSVAFEQL 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DI+G R+IV++ + CY+AL VVH W VPG+ KDYI+ PK N Y
Sbjct: 258 SDIFGFRVIVDSVDTCYRALGVVHTTWPMVPGRYKDYISTPKQNDY 303
>gi|399037150|ref|ZP_10734045.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF122]
gi|398065296|gb|EJL56939.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF122]
Length = 749
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 176/291 (60%), Gaps = 9/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTDMHLDESTIAVALLHDTIEDTT 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I FG + LVEG++K+ +L + + K +A+ L + LA++D R +
Sbjct: 80 ATRAEIDELFGEDIGRLVEGLTKIKKLDLVTK------KAKQAENLRKLLLAISDDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TLD + KR R ++ET++I+ PLA R+G+ + +LE+L F+H+NP+
Sbjct: 134 LVKLADRLHNMRTLDHMSPEKRARISEETMDIYAPLAGRMGMQDMREELEDLSFRHINPE 193
Query: 409 QHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ ++ +L E +E +V +L L+ ++ ++ GR K YS+ KM K L
Sbjct: 194 AYETVTGRLEELSKRNEGLVKKIETELGDLLEANGLTGAIVKGRQKKPYSVFRKMQSKSL 253
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +++ D+YG R+IV++ CY+AL +VH W VPG+ KDYI+ PK N Y
Sbjct: 254 SFEQLSDVYGFRIIVDDIPACYRALGIVHTRWRVVPGRFKDYISTPKQNDY 304
>gi|187925057|ref|YP_001896699.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia phytofirmans PsJN]
gi|187716251|gb|ACD17475.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia phytofirmans PsJN]
Length = 785
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 174/285 (61%), Gaps = 10/285 (3%)
Query: 236 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 295
AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++ +
Sbjct: 76 AFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWNLDAQALMAALLHDVMEDQGVTKAEL 135
Query: 296 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 354
FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+KLAD
Sbjct: 136 AERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLAD 189
Query: 355 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 414
RLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++ L
Sbjct: 190 RLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYATLE 249
Query: 415 S--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 472
K +V +E +++A+ D + V GR K+++SI+ KM K+L+ ++
Sbjct: 250 KAVKAARGNRREVVGKILESVQRAIADAKLDAEV-TGREKTIFSIYKKMRDKQLSFSQVL 308
Query: 473 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
D+YG R++VE+ +CY + +H L+ VPGK KDYI PK NGY
Sbjct: 309 DVYGFRVVVESALECYTCIGALHALYKPVPGKFKDYIAIPKVNGY 353
>gi|421489591|ref|ZP_15936968.1| GTP diphosphokinase [Streptococcus anginosus SK1138]
gi|400374658|gb|EJP27574.1| GTP diphosphokinase [Streptococcus anginosus SK1138]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 175/289 (60%), Gaps = 10/289 (3%)
Query: 232 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 291
V KA + A HRGQ R SG+PY++H ++ A +LA + ++ VA G LHD ++D +
Sbjct: 27 LVQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGFLHDVVEDTAAT 86
Query: 292 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 350
D + FG V +V+GV+KL ++ ++ E A + M +AM+ D R +L+
Sbjct: 87 LDDLEGEFGHDVRVIVDGVTKLGKVKYMSHEEQLA------ENHRKMLMAMSKDIRVILV 140
Query: 351 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 410
KLADRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++LNP +
Sbjct: 141 KLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLAFRYLNPTEF 200
Query: 411 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
++S + E E +V + K+E ++N+ + GR K +YSI+ KM KK
Sbjct: 201 YKISHLMKEKRREREELVDEVVHKIETYASERNLHGEIY-GRPKHIYSIYRKMQDKKKRF 259
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI+D+ +R I++ + D Y L +H+LW +PG+ KDYI K NGY
Sbjct: 260 DEIYDLIAIRCILDTQSDVYAMLGYIHELWRPMPGRFKDYIANRKANGY 308
>gi|417793474|ref|ZP_12440750.1| GTP diphosphokinase [Streptococcus oralis SK255]
gi|334272884|gb|EGL91238.1| GTP diphosphokinase [Streptococcus oralis SK255]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 179/294 (60%), Gaps = 12/294 (4%)
Query: 229 RED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 286
+ED FV KA A H GQ R SG+PY++H ++ A +LA + ++ VA G LHD ++
Sbjct: 22 KEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGFLHDVVE 81
Query: 287 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 345
D + D + R FG V +V+GV+KL ++ + E A + M +AM+ D
Sbjct: 82 DTDATLDDLEREFGHDVRIIVDGVTKLGKVEYKSLEEQLA------ENHRKMLMAMSEDI 135
Query: 346 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 405
R +L+KL+DRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +LE+L F++L
Sbjct: 136 RVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLSFRYL 195
Query: 406 NPDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 463
NP + +++ + E EA+V + KLE+ ++N+ + GR K +YSI+ KM
Sbjct: 196 NPTEFYKITHMMKEKRREREALVDEVVTKLEEYTSERNLKGKIY-GRPKHIYSIYRKMQD 254
Query: 464 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
KK +EI+D+ +R I++ + D Y L VH+LW +PG+ KDYI K NGY
Sbjct: 255 KKKRFEEIYDLIAIRCILDTQSDVYAMLGYVHELWKPMPGRFKDYIANRKANGY 308
>gi|228954691|ref|ZP_04116714.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071915|ref|ZP_04205126.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|229081671|ref|ZP_04214166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|229180683|ref|ZP_04308023.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|365158800|ref|ZP_09354991.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411798|ref|ZP_17388918.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|423426539|ref|ZP_17403570.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|423432416|ref|ZP_17409420.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|423437851|ref|ZP_17414832.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|423502906|ref|ZP_17479498.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449091374|ref|YP_007423815.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228602828|gb|EEK60309.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|228701675|gb|EEL54166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|228711211|gb|EEL63175.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|228805018|gb|EEM51614.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363626294|gb|EHL77285.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103866|gb|EJQ11843.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|401111286|gb|EJQ19185.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|401117172|gb|EJQ25010.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|401121006|gb|EJQ28802.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|402459127|gb|EJV90864.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449025131|gb|AGE80294.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 174/295 (58%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>gi|120553570|ref|YP_957921.1| (p)ppGpp synthetase I SpoT/RelA [Marinobacter aquaeolei VT8]
gi|120323419|gb|ABM17734.1| (p)ppGpp synthetase I, SpoT/RelA [Marinobacter aquaeolei VT8]
Length = 714
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 175/293 (59%), Gaps = 12/293 (4%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + V +A+Y AE+AH GQMR SGD Y+ H + A +LA + + + A +LHD ++D
Sbjct: 23 RINQVRRAYYYAEQAHEGQMRKSGDRYITHPLAVAGILADLRLDHQSLMAAMLHDVIEDT 82
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+ D + FG VA+LV+GVSKL+Q+ +R +A+ M LAMA D R
Sbjct: 83 GIPKDALAEQFGEDVAELVDGVSKLTQIEFRSRAE------AQAENFQKMTLAMAKDIRV 136
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM TL +P KR R A ETL+I+ P+ANRLG+ + +LE+L F L P
Sbjct: 137 ILVKLADRLHNMRTLGPMPYEKRLRIATETLDIYAPIANRLGMHSICTELEDLGFSSLYP 196
Query: 408 DQHTELSSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ SK VE ++ KL++ L+++ + +L GR K L SI+ KM K
Sbjct: 197 -MRAKYISKAVEKLRGSHREIIEDIQGKLQEKLEERGLPGRIL-GREKHLNSIYNKMKFK 254
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ + EI D+Y R+I + E++CY+ L VH L+ +PG+ KDYI PK NGY
Sbjct: 255 QKSFHEIMDVYAFRIITDTEDNCYRILGAVHSLYKPLPGRFKDYIAMPKSNGY 307
>gi|423395299|ref|ZP_17372500.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|423406174|ref|ZP_17383323.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
gi|401654710|gb|EJS72249.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|401660168|gb|EJS77650.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 181/312 (58%), Gaps = 27/312 (8%)
Query: 214 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 273
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 274 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 333
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 334 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 392
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 393 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 445
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 506 KDYITRPKFNGY 517
KDYI PK N Y
Sbjct: 297 KDYIAMPKANLY 308
>gi|206969775|ref|ZP_03230729.1| GTP diphosphokinase [Bacillus cereus AH1134]
gi|206735463|gb|EDZ52631.1| GTP diphosphokinase [Bacillus cereus AH1134]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 174/295 (58%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>gi|419781279|ref|ZP_14307111.1| GTP diphosphokinase [Streptococcus oralis SK100]
gi|383184671|gb|EIC77185.1| GTP diphosphokinase [Streptococcus oralis SK100]
Length = 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 182/302 (60%), Gaps = 12/302 (3%)
Query: 221 AQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAA 278
A K + +ED FV KA A H GQ R SG+PY++H ++ A +LA + ++ VA
Sbjct: 14 ALTKEYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVAC 73
Query: 279 GLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTM 338
G LHD ++D + D + R FG V +V+GV+KL ++ + E A + M
Sbjct: 74 GFLHDVVEDTDATLDDLEREFGHDVRIIVDGVTKLGKVEYKSLEEQLA------ENHRKM 127
Query: 339 FLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 397
+AM+ D R +L+KL+DRLHNM TL L K++R ++ET+EI+ PLA+RLGIS+ K +L
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 398 ENLCFKHLNPDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLY 455
E+L F++LNP + +++ + E EA+V + KLE+ ++N+ + GR K +Y
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDEVVTKLEEYATERNLKGKIY-GRPKHIY 246
Query: 456 SIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFN 515
SI+ KM KK +EI+D+ +R I++ + D Y L VH+LW +PG+ KDYI K N
Sbjct: 247 SIYRKMQDKKKRFEEIYDLIAIRCILDTQSDVYAMLGYVHELWKPMPGRFKDYIANRKAN 306
Query: 516 GY 517
GY
Sbjct: 307 GY 308
>gi|421186884|ref|ZP_15644265.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB418]
gi|399965134|gb|EJN99760.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB418]
Length = 748
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 186/320 (58%), Gaps = 17/320 (5%)
Query: 201 MEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCV 260
+E+ E + Y K +LA Q+K V A+ A++ H GQ R SG+ Y+ H +
Sbjct: 4 IENRSFEDVHDIYVK-YLAPDQVKR-------VDSAYQLAKKMHAGQKRKSGEDYIYHPI 55
Query: 261 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 320
+ A +LA + + +AAG LHD ++D + D I + +G VAD+V+GV+KL ++ +
Sbjct: 56 QVAGILADLKMDPDTIAAGFLHDVVEDTPETNDEIRQNYGDDVADIVDGVTKLGRIHYES 115
Query: 321 RENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLE 379
E N A + LAMA D R +++KLADRLHNM TL K+ R A ETL+
Sbjct: 116 TEENMAENH------RKLLLAMAKDVRVIIVKLADRLHNMRTLQVHRPEKQHRIASETLD 169
Query: 380 IFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQAL 437
I+ PLA+RLG++ K +LE+L ++L+PD++ ++ + +E A + SA +++E+ +
Sbjct: 170 IYAPLAHRLGLANIKWELEDLSLRYLDPDEYHRIAKMMHSRREERDADIASATKQIEKVI 229
Query: 438 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 497
D I + GR K +YSI+ KM K EI+D+ +R++V++ DCY AL +H
Sbjct: 230 SDLKIGHFEVTGRPKHIYSIYRKMTDKHKQFSEIYDLLAIRVLVDSVADCYAALGTIHAN 289
Query: 498 WAEVPGKMKDYITRPKFNGY 517
W +PG+ KDYI PK NGY
Sbjct: 290 WKPLPGRFKDYIALPKPNGY 309
>gi|52141100|ref|YP_085730.1| GTP diphosphokinase [Bacillus cereus E33L]
gi|51974569|gb|AAU16119.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus E33L]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 174/295 (58%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>gi|387812914|ref|YP_005428391.1| guanosine 3'-diphosphate 5-' diphosphate [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381337921|emb|CCG93968.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase In eubacteria
ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a
mediator of the stringent response that coordinates a
variety of cellular activities in response to changes in
nutritional abundance. This enzyme catalyzes the
degradation of ppGpp into GDP. It may also be capable of
catalyzing the synthesis of ppGpp [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 732
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 175/293 (59%), Gaps = 12/293 (4%)
Query: 229 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 288
R + V +A+Y AE+AH GQMR SGD Y+ H + A +LA + + + A +LHD ++D
Sbjct: 41 RINQVRRAYYYAEQAHEGQMRKSGDRYITHPLAVAGILADLRLDHQSLMAAMLHDVIEDT 100
Query: 289 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 347
+ D + FG VA+LV+GVSKL+Q+ +R +A+ M LAMA D R
Sbjct: 101 GIPKDALAEQFGEDVAELVDGVSKLTQIEFRSRAE------AQAENFQKMTLAMAKDIRV 154
Query: 348 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 407
+L+KLADRLHNM TL +P KR R A ETL+I+ P+ANRLG+ + +LE+L F L P
Sbjct: 155 ILVKLADRLHNMRTLGPMPYEKRLRIATETLDIYAPIANRLGMHSICTELEDLGFSSLYP 214
Query: 408 DQHTELSSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 464
+ SK VE ++ KL++ L+++ + +L GR K L SI+ KM K
Sbjct: 215 -MRAKYISKAVEKLRGSHREIIEDIRGKLQEKLEERGLPGRIL-GREKHLNSIYNKMKFK 272
Query: 465 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ + EI D+Y R+I + E++CY+ L VH L+ +PG+ KDYI PK NGY
Sbjct: 273 QKSFHEIMDVYAFRIITDTEDNCYRILGAVHSLYKPLPGRFKDYIAMPKSNGY 325
>gi|254469589|ref|ZP_05082994.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Pseudovibrio sp. JE062]
gi|211961424|gb|EEA96619.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Pseudovibrio sp. JE062]
Length = 735
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 171/291 (58%), Gaps = 10/291 (3%)
Query: 230 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 289
E + KA+ A + H Q RASGDPY+ H +E A +L + + +A LLHDT++D
Sbjct: 20 EALLNKAYVYAMQKHGTQTRASGDPYISHPLEVAAILTDMKLDDATIAVALLHDTIEDTD 79
Query: 290 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 348
+ I R FG + LVEG++K+ +L ++R K +A+ + LA+AD R +
Sbjct: 80 ATRAEIDRMFGEEIGKLVEGLTKIQRLDLVSR------KAKQAENFRKLLLAIADDVRVL 133
Query: 349 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 408
L+KLADRLHNM TL + KR R A+ET+EI+ PLA R+G+ + +LE++ F+ L PD
Sbjct: 134 LVKLADRLHNMRTLHHMREDKRIRIAEETMEIYAPLAGRMGMQDIRDELEDISFETLYPD 193
Query: 409 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 466
+ +L + +E ++T E L Q L ++ I+ + GR K YSI KM +K L
Sbjct: 194 ARNTIRERLAILHSKNEGLITDIEEDLTQRLAEQGITAKI-SGREKRAYSIFRKMEEKSL 252
Query: 467 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+++ DIYG R IV EDCY+ L V+H W VPG+ KDYI+ PK N Y
Sbjct: 253 GFEQLSDIYGFRAIVPALEDCYRVLGVIHTAWPCVPGRFKDYISTPKQNDY 303
>gi|239817298|ref|YP_002946208.1| (p)ppGpp synthetase I SpoT/RelA [Variovorax paradoxus S110]
gi|239803875|gb|ACS20942.1| (p)ppGpp synthetase I, SpoT/RelA [Variovorax paradoxus S110]
Length = 752
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 174/290 (60%), Gaps = 10/290 (3%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A+ AH GQ+R SG+PY+ H + A A ++ + A LLHD ++D +
Sbjct: 47 ELVRRAYRFADEAHLGQLRNSGEPYITHPIAVAAQCAEWKLDAQALMAALLHDAIEDCGV 106
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + FGA VA+LV+G++KL +L RE N +A+ M LAMA D R +L
Sbjct: 107 TKPELIERFGAPVAELVDGLTKLDKLQFNTREEN------QAESFRKMLLAMARDVRVIL 160
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
+KLADR HNM TLD P K R ++ETLEI+ P+A+RLG++ +L+ L F+HL P +
Sbjct: 161 VKLADRTHNMRTLDDAPREKWARISRETLEIYAPIAHRLGLNQTYRELQELSFRHLKPWR 220
Query: 410 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 467
+ LS + + ++ ++E A + N++ L + GR K+LYSI+ KM +K L+
Sbjct: 221 YATLSKAVAKARGRRRDLIQKVQREVETAFANANMT-LRIAGREKTLYSIYRKMEEKHLS 279
Query: 468 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
++ DIYG RLIV N CY L ++HQ++ +PGK KD+I K NGY
Sbjct: 280 FAQVTDIYGFRLIVPNVIACYTGLGILHQMYKPLPGKFKDHIAIAKLNGY 329
>gi|152998381|ref|YP_001343216.1| (p)ppGpp synthetase I SpoT/RelA [Marinomonas sp. MWYL1]
gi|150839305|gb|ABR73281.1| (p)ppGpp synthetase I, SpoT/RelA [Marinomonas sp. MWYL1]
Length = 705
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 179/289 (61%), Gaps = 11/289 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V +A+Y AE+AH GQ R SG+PY+ H + A +L+ + + + A LLHD ++D +S
Sbjct: 23 VKRAYYYAEQAHDGQRRKSGEPYVTHPLAVAEILSELRMDCDGLTAALLHDVIEDTGISR 82
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIK 351
+ + FG GVA LV+GVSKL+ L E N+ + +A M +AMAD R +L+K
Sbjct: 83 EALTEQFGEGVAGLVDGVSKLTHL-----EFNSQIEK-QAHNFQKMAMAMADDIRVILVK 136
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
LADRLHNM TLDA+P K++R A+ETL+I+ P+ANRLG+ +V LE+L F+ P +
Sbjct: 137 LADRLHNMRTLDAMPAHKKRRIARETLDIYAPIANRLGMYNVRVDLESLAFQAYYPMRAR 196
Query: 412 ELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTM 468
L + + + + + +KLE ++ + + + + R K +YSI+ KM KK+ ++
Sbjct: 197 MLQKAIHKKYGQQRIKDT-QKLEDTIRSELAADYIEATISVREKHIYSIYQKMDKKRRSL 255
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DEI D+ G+R++ + + CY+ L V+H L+ + G+ KDYI PK NGY
Sbjct: 256 DEIMDVMGVRIVTDRHDSCYRILGVIHALFKPIEGRFKDYIAVPKSNGY 304
>gi|217977182|ref|YP_002361329.1| (p)ppGpp synthetase I SpoT/RelA [Methylocella silvestris BL2]
gi|217502558|gb|ACK49967.1| (p)ppGpp synthetase I, SpoT/RelA [Methylocella silvestris BL2]
Length = 736
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 173/287 (60%), Gaps = 12/287 (4%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A +AH Q RASGDPY H +E A +L + + + A +LHDT++D + +
Sbjct: 24 RAYVYAMKAHGSQKRASGDPYFSHPLEVAAILTDMKLDDATIVAAVLHDTIEDTDSTREE 83
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
I R FG + LV+G++KL +L +++ K A+ + LA+A D R +L+KLA
Sbjct: 84 IDRLFGQDIGRLVDGLTKLKKLDLVSK------KAAHAENFRKLLLAIAQDVRVLLVKLA 137
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM TL +P KR+R A+ETL+I+ PLA R+G+ + +LE+L F+HL P+ + +
Sbjct: 138 DRLHNMRTLHFVPPEKRERIAEETLDIYAPLAGRMGMQGMRDELEDLAFRHLMPEAYATI 197
Query: 414 SSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDE 470
++L E + AI +E+ D+ + + + GR K YS+ KM +K + ++
Sbjct: 198 EARLDEFRRKN--GKAIATIEKEFVDELAAHGIKAKVAGREKQPYSVWRKMERKSIAFEQ 255
Query: 471 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ DI+G R++VE EDCY+ + VH WA VPG+ KDYI+ PK N Y
Sbjct: 256 LSDIFGFRVVVETVEDCYRVIGAVHTKWAVVPGRFKDYISTPKPNDY 302
>gi|357414529|ref|YP_004926265.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces flavogriseus ATCC
33331]
gi|320011898|gb|ADW06748.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces flavogriseus ATCC
33331]
Length = 884
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 173/289 (59%), Gaps = 18/289 (6%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 168 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 227
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 228 LRKDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 279
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 280 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 339
Query: 414 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 468
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 340 VRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 395
Query: 469 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN Y
Sbjct: 396 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMY 444
>gi|269103908|ref|ZP_06156605.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163806|gb|EEZ42302.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 701
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 182/312 (58%), Gaps = 17/312 (5%)
Query: 209 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 268
+L+ A E+L Q+ + + +A+ A AH GQ R+SG+PY++H + A +LA
Sbjct: 6 SLKEVAIEYLPEPQI-------EALRQAYLVARDAHEGQTRSSGEPYIIHPIAVARILAE 58
Query: 269 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 328
+ + + A LLHD ++D ++ D + FG VA+LV+GVSKL +L R K
Sbjct: 59 MRLDYETLMAALLHDVIEDTEVTKDDLATRFGDTVAELVDGVSKLDKLKFRDR------K 112
Query: 329 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 387
+A+ M +AMA D R +LIKLADR HNM TL AL KR+R A+ETLEIF PLA+R
Sbjct: 113 EAQAENFRKMIMAMAHDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIFSPLAHR 172
Query: 388 LGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFL 445
LGI K +LE L F+ L P+++ L + + + M+ ++E L D I
Sbjct: 173 LGIHNIKTELEELGFEALYPNRYRVLKNVVAAARGNRKEMINKIHAEIEGRLVDAGIDAQ 232
Query: 446 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 505
VL GR K+LYSI+ KM K+L I DIY R++V++ + CY+ L VH L+ P +M
Sbjct: 233 VL-GREKNLYSIYNKMKNKELRFHSIMDIYAFRVLVKDIDTCYRVLGQVHNLYKPRPSRM 291
Query: 506 KDYITRPKFNGY 517
KDYI PK NGY
Sbjct: 292 KDYIAIPKANGY 303
>gi|229192618|ref|ZP_04319579.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
gi|228590925|gb|EEK48783.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
Length = 727
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 174/295 (58%), Gaps = 20/295 (6%)
Query: 231 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 290
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 291 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 349
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 350 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 409
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 410 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 462
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 463 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N Y
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLY 308
>gi|313893200|ref|ZP_07826777.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442553|gb|EFR60968.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
Length = 742
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 177/288 (61%), Gaps = 10/288 (3%)
Query: 233 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 292
V+KAF A++AH GQ RASG+PY++H + A +LA + + + A L+HD ++D +
Sbjct: 42 VLKAFELADKAHEGQFRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYTK 101
Query: 293 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 351
+ + + FG+ VA LV+GV+KL+Q +E+ + + M LAMA D R V+IK
Sbjct: 102 EDLEKMFGSEVAFLVDGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIK 155
Query: 352 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 411
L DRLHNM TL + K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++
Sbjct: 156 LGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYY 215
Query: 412 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 469
+L ++ + E +V + +L +AL + NI + GR K YSI+ KM K +
Sbjct: 216 DLVDQMKQKRQVREDIVNDTMSQLTKALGEANIKADI-KGRPKHFYSIYKKMKKDNRDLS 274
Query: 470 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
+I+D+ +R+IV+ DCY L + H LW +P + KDYI+ PK N Y
Sbjct: 275 QIYDLLAVRVIVDTIPDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMY 322
>gi|423122732|ref|ZP_17110416.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Klebsiella oxytoca 10-5246]
gi|376392013|gb|EHT04680.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Klebsiella oxytoca 10-5246]
Length = 706
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 168/286 (58%), Gaps = 10/286 (3%)
Query: 235 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 294
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDHETLMAALLHDVIEDTPATYQD 84
Query: 295 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 353
+ + FG VA+LVEGVSKL +L K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKL------KFRDKKEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 354 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 413
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 414 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 471
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 472 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 517
DIY R+IV + + CY+ L +H L+ PG+MKDYI PK NGY
Sbjct: 258 MDIYAFRVIVHDADTCYRVLGQMHSLYKPRPGRMKDYIAIPKANGY 303
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,686,224,007
Number of Sequences: 23463169
Number of extensions: 302319787
Number of successful extensions: 990666
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5523
Number of HSP's successfully gapped in prelim test: 1248
Number of HSP's that attempted gapping in prelim test: 930961
Number of HSP's gapped (non-prelim): 35528
length of query: 533
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 386
effective length of database: 8,910,109,524
effective search space: 3439302276264
effective search space used: 3439302276264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)