Query 009485
Match_columns 533
No_of_seqs 267 out of 2331
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 06:15:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009485.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009485hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 1.1E-89 3.6E-94 738.8 51.7 500 28-531 3-513 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 1.9E-86 6.3E-91 712.0 50.0 486 31-531 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 4.9E-82 1.7E-86 683.2 46.2 490 26-532 5-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 2.4E-75 8.2E-80 624.6 39.6 456 31-532 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.4E-72 4.7E-77 605.9 38.6 450 47-530 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 5.7E-69 1.9E-73 582.0 41.9 455 33-530 24-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 1.1E-67 3.9E-72 572.0 44.6 460 28-531 17-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 1.4E-67 4.9E-72 571.5 42.8 449 48-531 33-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 3.2E-67 1.1E-71 566.6 41.4 457 28-531 5-479 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 7.3E-65 2.5E-69 543.4 38.0 436 47-530 12-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.6E-41 5.4E-46 369.3 36.6 219 27-265 29-258 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 6.7E-34 2.3E-38 307.9 38.6 197 70-273 52-259 (524)
13 3pm9_A Putative oxidoreductase 100.0 3.9E-35 1.3E-39 313.4 24.9 204 71-278 43-253 (476)
14 4bby_A Alkyldihydroxyacetoneph 100.0 3.3E-35 1.1E-39 326.3 21.7 240 28-274 160-406 (658)
15 4feh_A Oxidoreductase DPRE1; a 100.0 3E-32 1E-36 291.2 33.9 199 70-278 34-238 (481)
16 1wvf_A 4-cresol dehydrogenase 100.0 8.2E-32 2.8E-36 291.9 35.8 199 76-280 53-268 (520)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 5.3E-32 1.8E-36 295.5 21.7 200 76-276 134-338 (584)
18 2vfr_A Xylitol oxidase, aldito 100.0 4.1E-31 1.4E-35 279.5 23.7 175 71-258 12-189 (422)
19 2i0k_A Oxidoreductase; MIX alp 100.0 9.2E-30 3.1E-34 277.5 17.1 201 48-258 9-227 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 1.5E-28 5.1E-33 268.2 24.4 201 76-280 67-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 9.2E-29 3.1E-33 264.5 17.6 190 56-256 12-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 1.6E-28 5.6E-33 266.3 15.9 197 76-277 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.6E-25 5.4E-30 226.8 12.2 164 76-254 51-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 2.2E-25 7.5E-30 228.0 12.1 165 76-254 27-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 9.8E-25 3.3E-29 222.2 10.9 160 76-252 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 8.6E-24 2.9E-28 215.6 16.4 165 76-254 11-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 1.2E-22 4.2E-27 200.1 8.0 153 77-253 20-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.8E-19 9.7E-24 171.1 10.7 118 139-262 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.3 7.7E-07 2.6E-11 88.5 7.3 155 79-251 4-176 (287)
30 1n62_C Carbon monoxide dehydro 97.6 9.7E-05 3.3E-09 73.3 7.6 155 79-251 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.3 0.0001 3.4E-09 77.9 4.0 153 82-251 179-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 96.5 0.0038 1.3E-07 62.2 7.1 153 79-249 9-188 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.4 0.004 1.4E-07 61.5 6.2 151 79-249 4-173 (288)
34 3hrd_C Nicotinate dehydrogenas 92.9 0.18 6E-06 49.8 7.1 76 80-161 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 89.5 0.53 1.8E-05 47.0 6.6 77 79-162 5-84 (324)
36 4bby_A Alkyldihydroxyacetoneph 87.0 0.96 3.3E-05 49.7 7.2 28 496-523 625-653 (658)
37 3unc_A Xanthine dehydrogenase/ 72.9 4.3 0.00015 48.1 6.5 79 79-164 232-313 (1332)
38 1e8g_A Vanillyl-alcohol oxidas 57.9 13 0.00043 39.8 6.1 23 504-526 523-545 (560)
39 2i0k_A Oxidoreductase; MIX alp 46.9 6 0.0002 42.4 1.3 23 504-526 533-555 (561)
40 1xty_A PTH, peptidyl-tRNA hydr 45.1 20 0.0007 29.8 4.1 42 71-114 48-90 (120)
41 2uuu_A Alkyldihydroxyacetoneph 43.6 23 0.00079 38.0 5.3 28 496-523 551-579 (584)
42 1rzw_A Protein AF2095(GR4); be 41.1 30 0.001 29.0 4.5 42 71-114 42-84 (123)
43 1wn2_A Peptidyl-tRNA hydrolase 39.4 47 0.0016 27.7 5.5 42 71-114 49-91 (121)
44 1f0x_A DLDH, D-lactate dehydro 39.2 14 0.00048 39.6 2.7 28 502-530 535-562 (571)
45 2zv3_A PTH, peptidyl-tRNA hydr 38.4 46 0.0016 27.4 5.2 42 71-114 43-85 (115)
46 3js8_A Cholesterol oxidase; ch 37.8 10 0.00035 40.3 1.4 23 503-525 511-533 (540)
47 1rlk_A Hypothetical protein TA 37.1 48 0.0017 27.4 5.2 42 71-114 45-87 (117)
48 3zyv_A AOH1; oxidoreductase, m 36.6 24 0.00081 41.9 4.3 79 82-165 242-321 (1335)
49 1q7s_A BIT1, protein CGI-147; 30.9 85 0.0029 25.8 5.7 41 71-113 45-86 (117)
50 2ox1_A 3-dehydroquinate dehydr 21.6 1.5E+02 0.005 26.7 6.0 53 54-113 101-153 (196)
51 1yht_A DSPB; beta barrel, hydr 20.0 66 0.0022 32.2 3.5 29 86-114 91-121 (367)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.1e-89 Score=738.76 Aligned_cols=500 Identities=48% Similarity=0.915 Sum_probs=429.0
Q ss_pred hhhhHHHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEE
Q 009485 28 VQRTFLYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLR 107 (533)
Q Consensus 28 ~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 107 (533)
+.++|.+||+... .+|.++++.|++|+|+.|+++++++.+|.||+....++|.+||+|+|++||+++|++|+++++||+
T Consensus 3 ~~~~f~~c~~~~~-~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 81 (518)
T 3vte_A 3 PRENFLKCFSKHI-PNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIR 81 (518)
T ss_dssp HHHHHHHHHHHHC-CC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred hhHHHHHHHHhcC-CccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEE
Confidence 5678999999876 667788999999999999999888899999999889999999999999999999999999999999
Q ss_pred EEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCcccccccc
Q 009485 108 VRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHIT 187 (533)
Q Consensus 108 ~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ 187 (533)
+|||||++.|.+... ..+++||||++|++|++|+++++++||||+++.+|+++|.++|+++.+++|.|+++||||+++
T Consensus 82 vrggGh~~~g~~~~~--~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~ 159 (518)
T 3vte_A 82 TRSGGHDAEGMSYIS--QVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFS 159 (518)
T ss_dssp EESSCCCTTCTTTCC--SSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHH
T ss_pred EECCCcCCCCCccCC--CCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeC
Confidence 999999998877533 136899999999999999999999999999999999999999878999999999999999999
Q ss_pred CCCCCCCccccCccccceeeeEEEccCCceecccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecch-
Q 009485 188 GGAYGSMMRKYGIGADNVLDARIVDARGRVLDRAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTLE- 266 (533)
Q Consensus 188 ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~- 266 (533)
|||+|+++++||+++|+|++++||++||++++...+++|||||+|||++|+|||||+++||++|.|+....|.+.+..+
T Consensus 160 gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~ 239 (518)
T 3vte_A 160 GGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEI 239 (518)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCH
T ss_pred CCCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCH
Confidence 9999999999999999999999999999999754568999999999855899999999999999998877787777654
Q ss_pred hhHHHHHHHHHHHHHhhcccceEEEEEeecccc---ccCCceEEEEEEEEEeCCHhHHHHHHHhhCccCCCCcccceecC
Q 009485 267 QGATNILYKWQQVADKLDEDLFIRVLIQGSAAA---QKVNRTVTTSYNALFLGVADRLLQVMQKSFPELGLSRQDCIETS 343 (533)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~ 343 (533)
+++.+++.+|+++++.+|+++++.+.+...++. ..+.....+.+.++|+|+.+++.+.|.+.|++++....++..++
T Consensus 240 ~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~ 319 (518)
T 3vte_A 240 HGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFS 319 (518)
T ss_dssp HHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecc
Confidence 556789999999999999999998887653211 11123346788899999999999988888888887667788999
Q ss_pred hHHHHHHhcCCCCC-CC---hhhcccCCCCCcccceeccccccCCCCHHHHHHHHHHHhcC--CCcEEEEEecCCCCCCC
Q 009485 344 WIKSVIYIAGFPSN-ST---PEFLLQGKAMPKAYFKAKSDFVRTPIPTKALGGLWRRFLAE--DGPLMIWNPYGGMMSKI 417 (533)
Q Consensus 344 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~~~~~~~~~--~~~~i~~~~~Gg~~~~~ 417 (533)
|++.+.++..++.+ .+ ++.++++......|||.|++|+.+++++++++.+++.+.+. +.+.+.++++||+++++
T Consensus 320 w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v 399 (518)
T 3vte_A 320 WIDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEI 399 (518)
T ss_dssp HHHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTS
T ss_pred hhhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCC
Confidence 99988887655443 33 45555554344557889999998889999999999988763 35788999999999999
Q ss_pred CCCCCCCcccCCceEEEEEEeecCCChhHHHHHHHHHHHHHHhccccccCCCCccccccCCCccC-CCCCCCcchhhhhh
Q 009485 418 PENAIPFPHRKGTLFKIQYVTLWLDGEKSQNKHMNWIRNLYNYMAPYVSRFPRAAYVNYRDLDLG-MNNKCNASFNQARI 496 (533)
Q Consensus 418 ~~~~taf~~R~~~~~~i~~~~~W~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~-~~~~~~~~~~~~~~ 496 (533)
++++|||+||++..|.+++.+.|. +++.++++.+|++++++.|.|+.+.+++|+|+||+|.|++ .+...+++++.++.
T Consensus 400 ~~~~TAf~hR~~~~~~~~~~~~w~-~~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~ 478 (518)
T 3vte_A 400 SESAIPFPHRAGIMYELWYTASWE-KQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARI 478 (518)
T ss_dssp CTTSSSCCCCTTCCEEEEEEEEEC-CTTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHH
T ss_pred CCCCCcccccCcceEEEEEEEecC-CcchhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhh
Confidence 999999999995589999999997 4667788999999999999999766678999999999886 32123456677778
Q ss_pred hhhhhccccHHHHHHhhhccCCCCccccCCCCCCC
Q 009485 497 WGVKYFKNNFYRLVRVKTKVDPGNFFRHEQSIPTS 531 (533)
Q Consensus 497 ~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 531 (533)
|++.|||+||+||++||+||||+|||+++|||+|.
T Consensus 479 w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~ 513 (518)
T 3vte_A 479 WGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPL 513 (518)
T ss_dssp HHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCC
Confidence 99999999999999999999999999999999985
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=1.9e-86 Score=712.01 Aligned_cols=486 Identities=43% Similarity=0.791 Sum_probs=420.0
Q ss_pred hHHHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEe
Q 009485 31 TFLYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRS 110 (533)
Q Consensus 31 ~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~g 110 (533)
+|++||+... .++ ++.|++|+|++|+++++++.+|.||+....++|.+|++|+|++||+++|++|+++++||++||
T Consensus 1 ~~~~cl~~~~-~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrG 76 (495)
T 3fw9_A 1 DLLSCLTFNG-VRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRS 76 (495)
T ss_dssp CHHHHHHHTT-CCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEES
T ss_pred ChhHHHhhcC-CCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 4899999865 322 688999999999999878899999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCccccccccCCC
Q 009485 111 GGHDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGA 190 (533)
Q Consensus 111 gGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg 190 (533)
||||+.|.+...+ .+++||||++|++|++|+++++++||||+++.+|+++|.++|.++.+++|.|+++||||+++|||
T Consensus 77 gGh~~~g~~~~~~--~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg 154 (495)
T 3fw9_A 77 GGHSYEGLSYTSD--TPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGG 154 (495)
T ss_dssp SCCCTTCTTSCCS--SCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCC
T ss_pred CCcCCCCccccCC--CCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCC
Confidence 9999998877653 25899999999999999999999999999999999999999766889999999999999999999
Q ss_pred CCCCccccCccccceeeeEEEccCCceecccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecch-hhH
Q 009485 191 YGSMMRKYGIGADNVLDARIVDARGRVLDRAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTLE-QGA 269 (533)
Q Consensus 191 ~g~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~-~~~ 269 (533)
+|+++++||+++|+|++++||++||++++++.+++||||++|||++|+|||||+++||++|.|+....+.+.++.+ +.+
T Consensus 155 ~G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a 234 (495)
T 3fw9_A 155 FGMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEA 234 (495)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHH
T ss_pred CcccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHH
Confidence 9999999999999999999999999999855568999999999666899999999999999999887887777653 557
Q ss_pred HHHHHHHHHHHHhhcccceEEEEEeeccccccCCceEEEEEEEEEeCCHhHHHHHHHhhCccCCCCcccceecChHHHHH
Q 009485 270 TNILYKWQQVADKLDEDLFIRVLIQGSAAAQKVNRTVTTSYNALFLGVADRLLQVMQKSFPELGLSRQDCIETSWIKSVI 349 (533)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 349 (533)
.+++.+|+++++.+|+++++.+..... .....+.+.++|+|+.+++.+.|.+.|++++....++.+++|++.+.
T Consensus 235 ~~~l~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~ 308 (495)
T 3fw9_A 235 TSLLHKWQFVAEELEEDFTLSVLGGAD------EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFA 308 (495)
T ss_dssp HHHHHHHHHHHHHSCTTEEEEEEEEEE------TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHH
T ss_pred HHHHHHHHHHHhcCChhHeEEEEEcCC------CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHH
Confidence 789999999999999999887764311 23346788899999999999888887888877667788999999888
Q ss_pred HhcCCCCCCChhhcccCCCC-CcccceeccccccCCCCHHHHHHHHHHHhcCCCcEEEEEecCCCCCCCCCCCCCCcccC
Q 009485 350 YIAGFPSNSTPEFLLQGKAM-PKAYFKAKSDFVRTPIPTKALGGLWRRFLAEDGPLMIWNPYGGMMSKIPENAIPFPHRK 428 (533)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~-~~~~f~~~s~~~~~~l~~~~i~~~~~~~~~~~~~~i~~~~~Gg~~~~~~~~~taf~~R~ 428 (533)
++..++. ++.++++... .+.+||.|++|+.+++++++++.+++.+.+.+...+.++++||+++++++++|||+||+
T Consensus 309 ~~~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~ 385 (495)
T 3fw9_A 309 YLAGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRS 385 (495)
T ss_dssp HHTTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCT
T ss_pred HHhcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccC
Confidence 7754331 3334444322 34678999999998999999999999988777778999999999999999999999998
Q ss_pred CceEEEEEEeecCC-ChhHHHHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCC-----CCcchhhhhhhhhhhc
Q 009485 429 GTLFKIQYVTLWLD-GEKSQNKHMNWIRNLYNYMAPYVSRFPRAAYVNYRDLDLGMNNK-----CNASFNQARIWGVKYF 502 (533)
Q Consensus 429 ~~~~~i~~~~~W~~-~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~~~~~-----~~~~~~~~~~~~~~yy 502 (533)
+..|.+++.+.|.+ +++.++++.+|++++++.|.|+.+.+++|+|+||+|.+++.+.. ++.++++++.|++.||
T Consensus 386 ~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yy 465 (495)
T 3fw9_A 386 GTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYF 465 (495)
T ss_dssp TCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHH
T ss_pred ccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHh
Confidence 55899999999962 13567788999999999999997656679999999998763110 0234556678999999
Q ss_pred cccHHHHHHhhhccCCCCccccCCCCCCC
Q 009485 503 KNNFYRLVRVKTKVDPGNFFRHEQSIPTS 531 (533)
Q Consensus 503 G~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 531 (533)
|+||+||++||+||||+|||+++|||||.
T Consensus 466 g~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 466 LSNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp GGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HhHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 99999999999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=4.9e-82 Score=683.17 Aligned_cols=490 Identities=45% Similarity=0.883 Sum_probs=410.6
Q ss_pred cchhhhHHHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCe
Q 009485 26 YSVQRTFLYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIH 105 (533)
Q Consensus 26 ~~~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~ 105 (533)
.+..++|.+||++.. . ...|++|+|+.|.+.+.++.+|.||+....++|.+||+|+|++||+++|++|+++++|
T Consensus 5 ~~~~~~f~~~L~~~~-~-----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~ 78 (500)
T 3tsh_A 5 PAAKEDFLGCLVKEI-P-----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVR 78 (500)
T ss_dssp ----CHHHHHHHHHS-C-----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCE
T ss_pred cccHHHHHHHHHhhC-C-----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCc
Confidence 346789999999876 2 4578899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCcccccc
Q 009485 106 LRVRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGH 185 (533)
Q Consensus 106 ~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~ 185 (533)
|++|||||++.|.+......+++++|||++||+|++|+++++++||||+++.+|+++|.++|+.+.+++|.|++||+||+
T Consensus 79 ~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~ 158 (500)
T 3tsh_A 79 IRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGN 158 (500)
T ss_dssp EEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHH
T ss_pred EEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCc
Confidence 99999999999887653323468999999999999999999999999999999999999999888899999999999999
Q ss_pred ccCCCCCCCccccCccccceeeeEEEccCCceecccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecc
Q 009485 186 ITGGAYGSMMRKYGIGADNVLDARIVDARGRVLDRAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTL 265 (533)
Q Consensus 186 ~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~ 265 (533)
++|||+|.++++||+++|||+++|||++||++++...+++||||++|||++|+|||||+++||++|.|+.+..+...+..
T Consensus 159 ~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~ 238 (500)
T 3tsh_A 159 FAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTV 238 (500)
T ss_dssp HHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEET
T ss_pred cccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCc
Confidence 99999999999999999999999999999999986667899999999888899999999999999999988777777766
Q ss_pred hhhHHHHHHHHHHHHHhhcccceEEEEEeeccccccCCceEEEEEEEEEeCCHhHHHHHHHhhCccCCCCcccceecChH
Q 009485 266 EQGATNILYKWQQVADKLDEDLFIRVLIQGSAAAQKVNRTVTTSYNALFLGVADRLLQVMQKSFPELGLSRQDCIETSWI 345 (533)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 345 (533)
.+.+.+++.+|+.+.+.+|+++...+.... ....+.++|+|+.+++.+.+.+.++.++.....+..++|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (500)
T 3tsh_A 239 SEGAVDIINKWQVVAPQLPADLMIRIIAQG----------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWI 308 (500)
T ss_dssp TTTHHHHHHHHHHHGGGSCTTEEEEEEESS----------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHH
T ss_pred HHHHHHHHHHHHHhhhccChhhEEEEEecC----------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhh
Confidence 666778999999999999998877665432 1346678899999888888877777777766666778888
Q ss_pred HHHHHhcCCCCCCChhhcccCCCCCcccceeccccccCCCCHHHHHHHHHHHhcCC-CcEEEEEecCCCCCCCCCCCCCC
Q 009485 346 KSVIYIAGFPSNSTPEFLLQGKAMPKAYFKAKSDFVRTPIPTKALGGLWRRFLAED-GPLMIWNPYGGMMSKIPENAIPF 424 (533)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~~~~~~~~~~-~~~i~~~~~Gg~~~~~~~~~taf 424 (533)
+...+............+.++......+.+.++.++.++++++.++.+++.+...+ ...+.++++||++.++++++++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~ 388 (500)
T 3tsh_A 309 QSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPF 388 (500)
T ss_dssp HHHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSC
T ss_pred ccchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcC
Confidence 86654432222211222333333334455667778888888888888877665544 46778999999999999999999
Q ss_pred cccCCceEEEEEEeecCCChhHHHHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCC--CCcchhhhhhhhhhhc
Q 009485 425 PHRKGTLFKIQYVTLWLDGEKSQNKHMNWIRNLYNYMAPYVSRFPRAAYVNYRDLDLGMNNK--CNASFNQARIWGVKYF 502 (533)
Q Consensus 425 ~~R~~~~~~i~~~~~W~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~~~~~--~~~~~~~~~~~~~~yy 502 (533)
+||+..++++++...|. +++.+++..+|++++++.+.|+....+.++|+||+|.+++..+. ....+...++|++.||
T Consensus 389 ~~R~~~l~~i~~~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~ 467 (500)
T 3tsh_A 389 PHRKGVLFNIQYVNYWF-APGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYF 467 (500)
T ss_dssp CCCTTCCEEEEEEEEEC-STTCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHH
T ss_pred cccCCcEEEEEEEEecC-CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhh
Confidence 99997778999999997 56677888999999999999998767789999999999864322 1123445568999999
Q ss_pred cccHHHHHHhhhccCCCCccccCCCCCCCC
Q 009485 503 KNNFYRLVRVKTKVDPGNFFRHEQSIPTSL 532 (533)
Q Consensus 503 G~n~~RL~~IK~kyDP~nvF~~~qsI~~~~ 532 (533)
|+||+||++||+||||+|+|+++|||||.+
T Consensus 468 g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 468 KGNFERLAITKGKVDPTDYFRNEQSIPPLI 497 (500)
T ss_dssp GGGHHHHHHHHHHHCTTCCSCCTTSCCCCC
T ss_pred hHHHHHHHHHHHHhCcccccCCCCCCCCCC
Confidence 999999999999999999999999999975
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.4e-75 Score=624.64 Aligned_cols=456 Identities=24% Similarity=0.417 Sum_probs=370.4
Q ss_pred hHHHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEe
Q 009485 31 TFLYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRS 110 (533)
Q Consensus 31 ~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~g 110 (533)
+|.+||+++. ..++.|+|+.|+.++. +|+.+..++|.+||+|+|++||+++|++|+++++||++||
T Consensus 2 ~l~~cl~~~~--------~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~g 67 (473)
T 3rja_A 2 AIEACLSAAG--------VPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKS 67 (473)
T ss_dssp HHHHHHHHTT--------CCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEES
T ss_pred hHHHHHHhCC--------CcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 6889999964 3689999999998753 3555556799999999999999999999999999999999
Q ss_pred CCcCCCCCccccCCCCCeEEEEcCCCCcEE-EeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCccccccccCC
Q 009485 111 GGHDYEGLSYASEIETPFIVVDLARLRSVN-VDINQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGG 189 (533)
Q Consensus 111 gGh~~~g~s~~~~g~~~gvvIdl~~~~~i~-~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~gg 189 (533)
||||+.|.+... .++++||||++|++|. +|+++++++||||+++.+|+++|.++| ++.++.|.|+++||||+++||
T Consensus 68 gGh~~~g~~~~~--~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~gg 144 (473)
T 3rja_A 68 GGHSYASFGFGG--ENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHG 144 (473)
T ss_dssp SCCCTTCGGGTS--SSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTC
T ss_pred CCCCCCCCcccC--CCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCC
Confidence 999998654432 2357999999999996 999999999999999999999999998 377889999999999999999
Q ss_pred CCCCCccccCccccceeeeEEEccCCceec-ccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecch--
Q 009485 190 AYGSMMRKYGIGADNVLDARIVDARGRVLD-RAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTLE-- 266 (533)
Q Consensus 190 g~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~-- 266 (533)
|+|+++++||+++|+|++++||++||++++ +..+++||||++|||+ |+|||||+++||++|.|+....+.+.++..
T Consensus 145 g~G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 223 (473)
T 3rja_A 145 GFGFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNK 223 (473)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSH
T ss_pred CCCcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccH
Confidence 999999999999999999999999999997 5556899999999996 899999999999999998877787777654
Q ss_pred hhHHHHHHHHHHHHH-hhcccceEEEEEeeccccccCCceEEEEEEEEEeCCHhHHHHHHHhhCccCC-CCcccce-ecC
Q 009485 267 QGATNILYKWQQVAD-KLDEDLFIRVLIQGSAAAQKVNRTVTTSYNALFLGVADRLLQVMQKSFPELG-LSRQDCI-ETS 343 (533)
Q Consensus 267 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~ 343 (533)
+++.+++++|+++.. ++|+++++.+.+. . + . .+.+.++|+|+.+++.+++++.+...+ +...++. .++
T Consensus 224 ~~~~~~~~~~~~~~~~~~p~~l~~~~~~~-~-~-----~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~ 294 (473)
T 3rja_A 224 TSALKGIEAVEDYARWVAPREVNFRIGDY-G-A-----G--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLN 294 (473)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTEEEEEEES-S-S-----S--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEEC
T ss_pred HHHHHHHHHHHHHhhhCCChhHEEEEEEc-C-C-----C--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccC
Confidence 246789999999988 8999998887765 1 1 1 257788999999999888876543333 3445667 899
Q ss_pred hHHHHHHhcCCCCCCChhhcccCCCCCcccceeccccccCCCCHHHHHHHHHHHhcCC-----C-cEEEEEecCC---CC
Q 009485 344 WIKSVIYIAGFPSNSTPEFLLQGKAMPKAYFKAKSDFVRTPIPTKALGGLWRRFLAED-----G-PLMIWNPYGG---MM 414 (533)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~~~~~~~~~~-----~-~~i~~~~~Gg---~~ 414 (533)
|++...++.... ..+.... . ....|+.|+.++. +++++.++.+++.+.+.. . +.+.++++|| ++
T Consensus 295 ~~~~~~~~~~~~---~~~~~~~--~-~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai 367 (473)
T 3rja_A 295 WIESVLSYSNFD---HVDFITP--Q-PVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQV 367 (473)
T ss_dssp HHHHHHHTSSSS---CCCCSSC--C-CCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGG
T ss_pred HHHHHHhhhcCC---CcccccC--C-CCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhh
Confidence 999876654311 1111100 0 1345678888754 699999999999885421 1 3578999998 67
Q ss_pred CCCCCCCCCCcccCCceEEEEEEeecCCChhHHHHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCCCCcchhhh
Q 009485 415 SKIPENAIPFPHRKGTLFKIQYVTLWLDGEKSQNKHMNWIRNLYNYMAPYVSRFPRAAYVNYRDLDLGMNNKCNASFNQA 494 (533)
Q Consensus 415 ~~~~~~~taf~~R~~~~~~i~~~~~W~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~~~~~~~~~~~~~ 494 (533)
+++++++|||+||+ ..|.+++.+.|.++++.+++..+|++++++.+.+.....+.|+|+||+|.+++ .
T Consensus 368 ~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~ 435 (473)
T 3rja_A 368 TKVTNAETAYPHRD-KLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------R 435 (473)
T ss_dssp GGSCTTTSSCCCTT-CSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------H
T ss_pred cCCCCCCCccccCC-ccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------c
Confidence 78889999999999 58999999999522333445567777777766544322346899999998864 1
Q ss_pred hhhhhhhccccHHHHHHhhhccCCCCccccCCCCCCCC
Q 009485 495 RIWGVKYFKNNFYRLVRVKTKVDPGNFFRHEQSIPTSL 532 (533)
Q Consensus 495 ~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~~ 532 (533)
.+|++.|||+||+||++||+||||+|+|+++|||+|++
T Consensus 436 ~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 436 DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 37999999999999999999999999999999999974
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.4e-72 Score=605.93 Aligned_cols=450 Identities=22% Similarity=0.403 Sum_probs=351.7
Q ss_pred CcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCC
Q 009485 47 SSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIET 126 (533)
Q Consensus 47 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~ 126 (533)
+.+.+++|+|++|++++. .+|.|| ..+|.+||+|+|++||+++|++|+++++||++|||||++.+.+... +
T Consensus 8 ~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~---~ 78 (501)
T 3pop_A 8 VPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTP---R 78 (501)
T ss_dssp -CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSS---C
T ss_pred CCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccC---C
Confidence 467899999999999863 455555 5699999999999999999999999999999999999999877654 2
Q ss_pred CeEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHHH-hCCceeecCCCCCCccccccccCCCCCCCccccCccccce
Q 009485 127 PFIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIYE-KSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGIGADNV 205 (533)
Q Consensus 127 ~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v 205 (533)
++++|||++||+|++|+++++++||||+++.+|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+++|+|
T Consensus 79 ~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v 156 (501)
T 3pop_A 79 RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHL 156 (501)
T ss_dssp CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGE
T ss_pred CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhE
Confidence 479999999999999999999999999999999999975 56 678899999999999999999999999999999999
Q ss_pred eeeEEEc--cCCc--eecc----cCCCcchHHHhhcCCCCceeEEEEEEEEE----------EeeC-ceEEEEEEEecch
Q 009485 206 LDARIVD--ARGR--VLDR----AAMGEDLFWAIRGGGGASFGIILAWKVKL----------VPVP-ATVTVFTVSKTLE 266 (533)
Q Consensus 206 ~~~~vV~--~~G~--~~~~----~~~~~dl~~a~rg~~~g~~GiVt~~~l~~----------~~~~-~~~~~~~~~~~~~ 266 (533)
+++|||+ +||+ +++. +.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+..
T Consensus 157 ~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~ 236 (501)
T 3pop_A 157 HAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWA 236 (501)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGG
T ss_pred EEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchh
Confidence 9999999 8999 4432 35689999999998669999999999998 6644 4566667766543
Q ss_pred ----hhHHHHHHHHHHHHH--hhccc----ceEEEEEeeccccccCCceEEEEEEEEEeCCHhHHHHHHHhhCcc----C
Q 009485 267 ----QGATNILYKWQQVAD--KLDED----LFIRVLIQGSAAAQKVNRTVTTSYNALFLGVADRLLQVMQKSFPE----L 332 (533)
Q Consensus 267 ----~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~----l 332 (533)
+...++++.|+++.. ..|++ +...+.+... ..+ .+.+...|.|+.++..+++++.+.. +
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~ 309 (501)
T 3pop_A 237 MIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV-----SSG--VLQLMVQQDADVDPEGEILARFVASLTEGT 309 (501)
T ss_dssp GCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG-----GGC--EEEEEEEEETTTCTTCHHHHHHHHHHHTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC-----CCC--eEEEEEEEeCChHHHHHHHHHHHHhhhhcc
Confidence 224577888888775 23443 3333333211 112 2455667788876654445443221 2
Q ss_pred CC-CcccceecChHHHHHHhcCCCCCCChhhcccCCCCCcccceeccccccCCCCHHHHHHHHHHHhcC---CCcEEEEE
Q 009485 333 GL-SRQDCIETSWIKSVIYIAGFPSNSTPEFLLQGKAMPKAYFKAKSDFVRTPIPTKALGGLWRRFLAE---DGPLMIWN 408 (533)
Q Consensus 333 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~~~~~~~~~---~~~~i~~~ 408 (533)
+. ...++..++|.+...+... +.+.+ ....++|.|+.++.++++++.++.+++.+... +.+.+.++
T Consensus 310 g~~p~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~ 379 (501)
T 3pop_A 310 GVVGIPRGGVMSWLTGTRYMSQ-ADCGD---------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFN 379 (501)
T ss_dssp SCCCEEEEEEEEHHHHHHHTCB-CSCGG---------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEE
T ss_pred CCCccceeEEeCHHHHHhhhcC-CCCCc---------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEE
Confidence 21 1223677899987655321 11000 01235778899998889999999999988653 23678899
Q ss_pred ecCCCCCCCCCCCCCCcccCCceEEEEEEeecCCChhHHHHHHHHHHHHHHhccccc------cCCCCccccccCCCccC
Q 009485 409 PYGGMMSKIPENAIPFPHRKGTLFKIQYVTLWLDGEKSQNKHMNWIRNLYNYMAPYV------SRFPRAAYVNYRDLDLG 482 (533)
Q Consensus 409 ~~Gg~~~~~~~~~taf~~R~~~~~~i~~~~~W~~~~~~~~~~~~w~~~~~~~l~~~~------~~~~~g~YvNy~d~~~~ 482 (533)
++||+++++++++|||+||+ ..|++++...|. +++.++++.+|++++++.|.++. +..+.|+|+||+|.|++
T Consensus 380 ~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~-~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~ 457 (501)
T 3pop_A 380 SYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQ-DAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLL 457 (501)
T ss_dssp ECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEES-CGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGG
T ss_pred ecCcccccCCCCCCCccCcC-ccEEEEEEEEeC-CcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccc
Confidence 99999999999999999999 589999999997 56677889999999999997653 22357999999999876
Q ss_pred CCCCCCcchhhhhhhhhhhccccHHHHHHhhhccCCCCccccCCCCCC
Q 009485 483 MNNKCNASFNQARIWGVKYFKNNFYRLVRVKTKVDPGNFFRHEQSIPT 530 (533)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~ 530 (533)
..+. +.+ +..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 458 ~~~~-~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 458 DPAR-NRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp CTTT-CCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccc-ccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 3110 011 2349999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=5.7e-69 Score=582.05 Aligned_cols=455 Identities=25% Similarity=0.445 Sum_probs=345.3
Q ss_pred HHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCC
Q 009485 33 LYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGG 112 (533)
Q Consensus 33 ~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggG 112 (533)
.+||.... ..|++|+|+.|++++ ...+|.||. ..|.+||+|+|++||+++|++|+++++||+|||||
T Consensus 24 ~~~l~~~~--------~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggG 90 (523)
T 2wdx_A 24 ERCLPPAG--------PVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGG 90 (523)
T ss_dssp --CCCCCC--------CEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred hhhcccCC--------CeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 38887743 578999999999986 236677774 48999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHHH-hCCceeecCCCCCCccccccccCCCC
Q 009485 113 HDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIYE-KSNIHGFPAGLCTSLGIGGHITGGAY 191 (533)
Q Consensus 113 h~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~G~~~~vgvgG~~~ggg~ 191 (533)
|++.+.+... .++++|||++||+|++|+++++|+||||+++.+|+++|.+ +| +.+++|.|++|||||+++|||+
T Consensus 91 h~~~g~~~~~---~~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~ 165 (523)
T 2wdx_A 91 HCFEDFVDNP---DVKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGY 165 (523)
T ss_dssp CCSSSSSSST---TCCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCC
T ss_pred CCCCCCccCC---CCeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCC
Confidence 9999876543 2579999999999999999999999999999999999985 87 5778899999999999999999
Q ss_pred CCCccccCccccceeeeEEEccC--Cceec---cc-CCCcc--hHHHhhcCCCCceeEEEEEEEEE-----------Eee
Q 009485 192 GSMMRKYGIGADNVLDARIVDAR--GRVLD---RA-AMGED--LFWAIRGGGGASFGIILAWKVKL-----------VPV 252 (533)
Q Consensus 192 g~~~~~~G~~~d~v~~~~vV~~~--G~~~~---~~-~~~~d--l~~a~rg~~~g~~GiVt~~~l~~-----------~~~ 252 (533)
|+++++||+++|+|+++|||++| |+++. +. ++++| ||||+|||++|+|||||+++||+ +|.
T Consensus 166 g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~ 245 (523)
T 2wdx_A 166 GPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPK 245 (523)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCC
T ss_pred CcccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCC
Confidence 99999999999999999999955 99753 22 24565 99999987768999999999999 998
Q ss_pred Cc-eEEEEEEEecch----hhHHHHHHHHHHHHHh--hccc----ceEEEEEeeccccccCCceEEEEEEEEEeCCHhHH
Q 009485 253 PA-TVTVFTVSKTLE----QGATNILYKWQQVADK--LDED----LFIRVLIQGSAAAQKVNRTVTTSYNALFLGVADRL 321 (533)
Q Consensus 253 ~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 321 (533)
|+ .+..+.+.|+.+ +...++++.|+++... .|++ +...+.+... ..+...+.+.+..+|.|+.++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~g~~~~~ 322 (523)
T 2wdx_A 246 PPATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE---VPGMGESGFMMPIQVDATRPDA 322 (523)
T ss_dssp CCSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC---CTTCTTCSEEEEEEEETTSTTH
T ss_pred CcccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC---CCCCcceeEEEEEEEeCCHHHH
Confidence 76 456667777542 2345788888888764 4554 3333333221 1121012345567788887665
Q ss_pred HHHHHhhCc---c-CC-CCcccceecChHHHHHHhcCCCCCCChhhcccCCCCCcccceeccccccCCCCHHHHHHHHHH
Q 009485 322 LQVMQKSFP---E-LG-LSRQDCIETSWIKSVIYIAGFPSNSTPEFLLQGKAMPKAYFKAKSDFVRTPIPTKALGGLWRR 396 (533)
Q Consensus 322 ~~~l~~~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~~~~~ 396 (533)
.+.+.+.+. . ++ ....++..++|.+..... .. ...+++.++.++.+.++++.+..+++.
T Consensus 323 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (523)
T 2wdx_A 323 RRLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPGR-------------GG---RGPASKTKAGYLRKRLTDRQIQAVYEN 386 (523)
T ss_dssp HHHHHHHHHHHHTTCTTCBCCCCEEEETTSSCCCC-------------CS---SCCEEEEEEEEESSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCccccceeccHHHHHHhh-------------cC---CCCceeeecccccCCCCHHHHHHHHHH
Confidence 555544222 1 23 222334455665421110 00 011456677777667888889999988
Q ss_pred HhcC---CCcEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEeecCCChhHHHHHHHHHHHHHHhcc------ccccC
Q 009485 397 FLAE---DGPLMIWNPYGGMMSKIPENAIPFPHRKGTLFKIQYVTLWLDGEKSQNKHMNWIRNLYNYMA------PYVSR 467 (533)
Q Consensus 397 ~~~~---~~~~i~~~~~Gg~~~~~~~~~taf~~R~~~~~~i~~~~~W~~~~~~~~~~~~w~~~~~~~l~------~~~~~ 467 (533)
+... +.+.+.++++||++++++.++++|+||+ ..+++++...|. +++.++.+.+|++++++.+. |+.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~-~~~~~~~~~~~~~~~~~~l~~~~~g~p~~~~ 464 (523)
T 2wdx_A 387 MTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWA-NPGNEAKHLTWVRKLYADVYAETGGVPVPND 464 (523)
T ss_dssp HTCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEES-SGGGHHHHHHHHHHHHHHHTGGGTTSCCSCS
T ss_pred HHhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcC-CCccHHHHHHHHHHHHHHHHhhhcCCCccCC
Confidence 8653 2356788999999999999999999999 589999999997 56677888999999999887 43211
Q ss_pred CCCccccccCCCccCCCCCCCcchhhhhhhhhhhccccHHHHHHhhhccCCCCccccCCCCCC
Q 009485 468 FPRAAYVNYRDLDLGMNNKCNASFNQARIWGVKYFKNNFYRLVRVKTKVDPGNFFRHEQSIPT 530 (533)
Q Consensus 468 ~~~g~YvNy~d~~~~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~ 530 (533)
...|+|+||+|.+++..+ .+.+. ..|++.|||+||+||++||+||||+|||+++|||+|
T Consensus 465 ~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 465 VSDGAYINYPDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp SBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CCCcceecCCcccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 235899999999865210 00111 139999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.1e-67 Score=572.02 Aligned_cols=460 Identities=24% Similarity=0.419 Sum_probs=342.3
Q ss_pred hhhhHHHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEE
Q 009485 28 VQRTFLYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLR 107 (533)
Q Consensus 28 ~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 107 (533)
-.-+...|+.... ..|++|+|+.|++++ +..+|.||. ..|.+||+|+|++||+++|++|+++++||+
T Consensus 17 ~~~~~~~~~~~~~--------~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 83 (521)
T 2ipi_A 17 WEFDGGACGARTA--------LVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIA 83 (521)
T ss_dssp ------------C--------CCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEE
T ss_pred hhccccccccCCC--------CeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEE
Confidence 3445667877643 478899999999986 235677774 489999999999999999999999999999
Q ss_pred EEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHH-HhCCceeecCCCCCCccccccc
Q 009485 108 VRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIY-EKSNIHGFPAGLCTSLGIGGHI 186 (533)
Q Consensus 108 ~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~-~~g~~~~~~~G~~~~vgvgG~~ 186 (533)
||||||++.+.+... .++++|||++||+|++|+++++|+||||+++.+|+++|. ++| +.+++|.|+++||||++
T Consensus 84 vrggGh~~~g~~~~~---~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~ 158 (521)
T 2ipi_A 84 VRSGGHCFEGFVDDP---AVRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHV 158 (521)
T ss_dssp EESSCCCTTCGGGCT---TCCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHT
T ss_pred EECCCcCCCCCcccC---CCeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcc
Confidence 999999998866433 257999999999999999999999999999999999997 677 67789999999999999
Q ss_pred cCCCCCCCccccCccccceeeeEEEccC--Cceec---cc-CCCcc--hHHHhhcCCCCceeEEEEEEEEE---------
Q 009485 187 TGGAYGSMMRKYGIGADNVLDARIVDAR--GRVLD---RA-AMGED--LFWAIRGGGGASFGIILAWKVKL--------- 249 (533)
Q Consensus 187 ~ggg~g~~~~~~G~~~d~v~~~~vV~~~--G~~~~---~~-~~~~d--l~~a~rg~~~g~~GiVt~~~l~~--------- 249 (533)
+|||+|+++++||+++|+|+++|||++| |+++. .. ++++| ||||+|||++|+|||||+++||+
T Consensus 159 ~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~ 238 (521)
T 2ipi_A 159 LGGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPS 238 (521)
T ss_dssp TTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGG
T ss_pred cCCCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcc
Confidence 9999999999999999999999999977 98742 22 24554 99999997668999999999999
Q ss_pred --EeeCc-eEEEEEEEecch----hhHHHHHHHHHHHHHh--hccc----ceEEEEEeeccccccCCceEEEEEEEEEeC
Q 009485 250 --VPVPA-TVTVFTVSKTLE----QGATNILYKWQQVADK--LDED----LFIRVLIQGSAAAQKVNRTVTTSYNALFLG 316 (533)
Q Consensus 250 --~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 316 (533)
+|.|+ .+..+.+.|+.+ +...++++.|+++... .|++ +...+.+... ..+ .+.+...|.|
T Consensus 239 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~-----~~~--~~~~~~~~~g 311 (521)
T 2ipi_A 239 QLLPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSR-----AAG--QILLDIQIDG 311 (521)
T ss_dssp GSSCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECT-----TSC--EEEEEEEEET
T ss_pred cccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccC-----CCC--ceEEEEEecc
Confidence 88875 355556666432 2235788888888754 3443 3333333221 112 2445566888
Q ss_pred CHhHHHHHHHhhC---cc-CC-CCcccceecChHHHHHHhcCCCCCCChhhcccCCCCCcccceeccccccCCCCHHHHH
Q 009485 317 VADRLLQVMQKSF---PE-LG-LSRQDCIETSWIKSVIYIAGFPSNSTPEFLLQGKAMPKAYFKAKSDFVRTPIPTKALG 391 (533)
Q Consensus 317 ~~~~~~~~l~~~~---~~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~ 391 (533)
+.++..+.+++.+ .. ++ +...+...++|.+......... ....+++.++.++.+.++++.++
T Consensus 312 ~~~~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~s~~~~~~~~~~~i~ 378 (521)
T 2ipi_A 312 GLDGAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDT-------------GGFDRTKSKGAYLRKPWTAAQAA 378 (521)
T ss_dssp TSTTHHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCC-------------TTCCEEEEEEEEESSCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCC-------------CCCccceeeccccccCCCHHHHH
Confidence 7766555554422 11 23 2234455678887543221100 00024556677777678889999
Q ss_pred HHHHHHhcCC--CcEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEeecCCChhHHHHHHHHHHHHHHhcc------c
Q 009485 392 GLWRRFLAED--GPLMIWNPYGGMMSKIPENAIPFPHRKGTLFKIQYVTLWLDGEKSQNKHMNWIRNLYNYMA------P 463 (533)
Q Consensus 392 ~~~~~~~~~~--~~~i~~~~~Gg~~~~~~~~~taf~~R~~~~~~i~~~~~W~~~~~~~~~~~~w~~~~~~~l~------~ 463 (533)
.+++.+.+.+ .+.+.++++||++++++.++|+|+||+ ..+++++...|. +++.++...+|++++++.+. |
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~g~p 456 (521)
T 2ipi_A 379 TLYRHLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWM-DPAHDDANLAWIREIYREIFATTGGVP 456 (521)
T ss_dssp HHHHHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEES-CGGGHHHHHHHHHHHHHHHTTTTTSSC
T ss_pred HHHHHHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecC-CCCchHHHHHHHHHHHHHHHhhhcCCC
Confidence 9999887643 367889999999999988999999999 589999999997 56667788999999999887 3
Q ss_pred cccCCCCccccccCCCccCCCCCCCcchhhhhhhhhhhccccHHHHHHhhhccCCCCccccCCCCCCC
Q 009485 464 YVSRFPRAAYVNYRDLDLGMNNKCNASFNQARIWGVKYFKNNFYRLVRVKTKVDPGNFFRHEQSIPTS 531 (533)
Q Consensus 464 ~~~~~~~g~YvNy~d~~~~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 531 (533)
+......|+|+||+|.+++..+ .+.++ ..|++.|||+||+||++||+||||+|+|+++|||+|.
T Consensus 457 ~~~~~~~g~Y~Ny~d~~~~~~~-~~~~~---~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 457 VPDDRTEGTFINYPDVDLVDER-WNTSG---VPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp CSSSSBCCCCTTSCCGGGGCTT-TSCCS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cccCCCCceEeCCCCccccccc-cccch---hhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 2111135899999999865210 00111 1499999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.4e-67 Score=571.47 Aligned_cols=449 Identities=27% Similarity=0.477 Sum_probs=342.3
Q ss_pred cceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCC
Q 009485 48 STYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETP 127 (533)
Q Consensus 48 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~ 127 (533)
...|++|+|+.|+.+++ .+|.||. ..|.+||.|+|++||+++|++|+++++||+||||||++.+.+... .+
T Consensus 33 ~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~---~~ 103 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANS---DV 103 (530)
T ss_dssp -CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCT---TC
T ss_pred CceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccC---CC
Confidence 34789999999999864 4566664 589999999999999999999999999999999999998866543 25
Q ss_pred eEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHHH-hCCceeecCCCCCCccccccccCCCCCCCccccCcccccee
Q 009485 128 FIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIYE-KSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGIGADNVL 206 (533)
Q Consensus 128 gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~ 206 (533)
+++|||++|++|++|+++++|+||||+++.+|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+++|+|+
T Consensus 104 gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 181 (530)
T 2y3s_A 104 RVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLH 181 (530)
T ss_dssp CEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEE
T ss_pred eEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhhee
Confidence 79999999999999999999999999999999999986 77 6788899999999999999999999999999999999
Q ss_pred eeEEEc--cCCceec---ccC-CCcc--hHHHhhcCCCCceeEEEEEEEEE------------EeeCc-eEEEEEEEecc
Q 009485 207 DARIVD--ARGRVLD---RAA-MGED--LFWAIRGGGGASFGIILAWKVKL------------VPVPA-TVTVFTVSKTL 265 (533)
Q Consensus 207 ~~~vV~--~~G~~~~---~~~-~~~d--l~~a~rg~~~g~~GiVt~~~l~~------------~~~~~-~~~~~~~~~~~ 265 (533)
++|||+ ++|+++. +.. +++| ||||+|||++|+|||||+++||+ +|.|+ .+..+.+.|+.
T Consensus 182 ~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 261 (530)
T 2y3s_A 182 AVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPW 261 (530)
T ss_dssp EEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEES
T ss_pred eEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecc
Confidence 999999 5599742 222 4555 99999998668999999999999 88875 45556666643
Q ss_pred h----hhHHHHHHHHHHHHHh--hccc----ceEEEEEeeccccccCCceEEEEEEEEEeCCHhHHHHHHHhhC---cc-
Q 009485 266 E----QGATNILYKWQQVADK--LDED----LFIRVLIQGSAAAQKVNRTVTTSYNALFLGVADRLLQVMQKSF---PE- 331 (533)
Q Consensus 266 ~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~---~~- 331 (533)
+ +...++++.|+++... .|++ +...+.+... ... .+.+...|.|+.++..+++++.+ ..
T Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~ 334 (530)
T 2y3s_A 262 EGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS-----QSG--ALAMTTQLDATGPDAEKRLETYLAAVSEG 334 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG-----GGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC-----CCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 2 2345788888887754 3443 3333333211 112 34455668888766555554422 12
Q ss_pred CC-CCcccceecChHHHHHHhcCCCCCCChhhcccCCCCCcccceeccccccCCCCHHHHHHHHHHHhcCC----CcEEE
Q 009485 332 LG-LSRQDCIETSWIKSVIYIAGFPSNSTPEFLLQGKAMPKAYFKAKSDFVRTPIPTKALGGLWRRFLAED----GPLMI 406 (533)
Q Consensus 332 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~~~~~~~~~~----~~~i~ 406 (533)
++ +...++..++|.+.......... .. .. .+++.++.++.+.++++.++.+++.+...+ .+.+.
T Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 403 (530)
T 2y3s_A 335 VGVQPHSDTRRLPWLHSTRWPGIAGD--------GD--MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVA 403 (530)
T ss_dssp CSSCCEEEEEEEEHHHHTTCHHHHCC--------CC--CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEE
T ss_pred cCCCccceeeeccHHHHHHhhcCCCC--------Cc--cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEE
Confidence 33 22344566788775432211000 00 01 345667878776788899999999887532 36788
Q ss_pred EEecCCCCCCCCCCCCCCcccCCceEEEEEEeecCCChhHHHHHHHHHHHHHHhcc------ccccCCCCccccccCCCc
Q 009485 407 WNPYGGMMSKIPENAIPFPHRKGTLFKIQYVTLWLDGEKSQNKHMNWIRNLYNYMA------PYVSRFPRAAYVNYRDLD 480 (533)
Q Consensus 407 ~~~~Gg~~~~~~~~~taf~~R~~~~~~i~~~~~W~~~~~~~~~~~~w~~~~~~~l~------~~~~~~~~g~YvNy~d~~ 480 (533)
++++||+++++++++++|+||+ ..+++++...|. +++.++++.+|++++++.+. |+.+....|+|+||+|.+
T Consensus 404 ~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~-~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~ 481 (530)
T 2y3s_A 404 LIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWE-DPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVD 481 (530)
T ss_dssp EEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEEC-CTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGG
T ss_pred EEecCCccccCCCCcCcccccc-cceeEEEEEecC-CCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcc
Confidence 9999999999999999999999 589999999997 45667788999999999887 332112358999999998
Q ss_pred cCCCCCCCcchhhhhhhhhhhccccHHHHHHhhhccCCCCccccCCCCCCC
Q 009485 481 LGMNNKCNASFNQARIWGVKYFKNNFYRLVRVKTKVDPGNFFRHEQSIPTS 531 (533)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 531 (533)
++..+ .+.+. ..|++.|||+||+||++||+||||+|||+++|||+|+
T Consensus 482 ~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 482 LADEE-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp GGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 65210 00111 1499999999999999999999999999999999985
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=3.2e-67 Score=566.63 Aligned_cols=457 Identities=21% Similarity=0.390 Sum_probs=353.0
Q ss_pred hhhhHHHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEE
Q 009485 28 VQRTFLYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLR 107 (533)
Q Consensus 28 ~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 107 (533)
..+.|.+||.... ..++.|+++.|.... .+|+.+....|.+||+|+|++||+++|++|+++++||+
T Consensus 5 ~~~~l~~~l~~~~--------~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 70 (503)
T 1zr6_A 5 EFNSINACLAAAD--------VEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQIS 70 (503)
T ss_dssp TTCHHHHHHHHTT--------CEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHhhCcCC--------ceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEE
Confidence 4567899998642 257889999998763 24665556799999999999999999999999999999
Q ss_pred EEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCcccccccc
Q 009485 108 VRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHIT 187 (533)
Q Consensus 108 ~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ 187 (533)
||||||++.+.+... ..++++|||++|++|++| ++++|+||||+++.+|+++|.+++ ++.++.|.|+++||||+++
T Consensus 71 v~ggGh~~~~~~~~~--~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~ 146 (503)
T 1zr6_A 71 AKGGGHSYGSYGFGG--EDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVL 146 (503)
T ss_dssp EESSCCCTTCTTTTS--SSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHH
T ss_pred EECCCcCCCCCcccC--CCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhc
Confidence 999999998765531 125799999999999999 888999999999999999998876 5788899999999999999
Q ss_pred CCCCCCCccccCccccceeeeEEEccCCceec-ccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecc-
Q 009485 188 GGAYGSMMRKYGIGADNVLDARIVDARGRVLD-RAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTL- 265 (533)
Q Consensus 188 ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~- 265 (533)
|||+|+++++||+++|+|+++|||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+....+.+.+..
T Consensus 147 gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~ 225 (503)
T 1zr6_A 147 GGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWN 225 (503)
T ss_dssp HCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCC
T ss_pred CCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCC
Confidence 99999999999999999999999999999997 5567899999999998 69999999999999999866666666644
Q ss_pred hhhHHHHHHHHHHHHHh-hcccceEEEEEeeccccccCCceEEEEEEEEEeCCHhHHHHHHHhhCccCCC--Ccccceec
Q 009485 266 EQGATNILYKWQQVADK-LDEDLFIRVLIQGSAAAQKVNRTVTTSYNALFLGVADRLLQVMQKSFPELGL--SRQDCIET 342 (533)
Q Consensus 266 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~~ 342 (533)
.+.+.++++.|+++... +|++++..+.+... .+.+..+|+|+.++..+.+++.+..++. ...++..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~ 295 (503)
T 1zr6_A 226 RKQHVAGLKALQDWAQNTMPRELSMRLEINAN----------ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVET 295 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTBCCEEEEETT----------EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhcCChhHEEEEEEeCC----------eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeC
Confidence 23456788999998876 88888887766421 4566788999988887777664333333 12344567
Q ss_pred ChHHHHHHhcCCCCCCChhhcccCCCCCcccceeccccccCCCCHHHHHHHHHHHh-cCC----C-cEEEEEecCC---C
Q 009485 343 SWIKSVIYIAGFPSNSTPEFLLQGKAMPKAYFKAKSDFVRTPIPTKALGGLWRRFL-AED----G-PLMIWNPYGG---M 413 (533)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~~~~~~~-~~~----~-~~i~~~~~Gg---~ 413 (533)
+|.+....+.. +..... ......+..++.++.++.+ ++++.++.+++.+. ... . +.+.++++|| +
T Consensus 296 ~~~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~a 369 (503)
T 1zr6_A 296 DWYGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSA 369 (503)
T ss_dssp CHHHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCS
T ss_pred CHHHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhh
Confidence 78764432211 000000 0011112346677777766 88889999998887 432 1 3578899999 8
Q ss_pred CCCCCCCCCCCcccCCceEEEEEEeecC----CChhHHHHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCCCCc
Q 009485 414 MSKIPENAIPFPHRKGTLFKIQYVTLWL----DGEKSQNKHMNWIRNLYNYMAPYVSRFPRAAYVNYRDLDLGMNNKCNA 489 (533)
Q Consensus 414 ~~~~~~~~taf~~R~~~~~~i~~~~~W~----~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~~~~~~~~ 489 (533)
+.++++++++|+||+ ..+++++...|. ++++.++...+|++++.+.+.........|+|+||+|.+++
T Consensus 370 v~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~------- 441 (503)
T 1zr6_A 370 LAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT------- 441 (503)
T ss_dssp GGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTTTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-------
T ss_pred hcCCCcccCCccccc-ceeEEEEEeeeccccCCCccchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-------
Confidence 888888999999999 578888766661 12233344456777666655433211124899999998753
Q ss_pred chhhhhhhhhhhccccHHHHHHhhhccCCCCccccCCCCCCC
Q 009485 490 SFNQARIWGVKYFKNNFYRLVRVKTKVDPGNFFRHEQSIPTS 531 (533)
Q Consensus 490 ~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 531 (533)
..+|++.|||+||+||++||+||||+|+|+++|+|+|.
T Consensus 442 ----~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~ 479 (503)
T 1zr6_A 442 ----KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPI 479 (503)
T ss_dssp ----HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred ----cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCch
Confidence 12699999999999999999999999999999999875
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=7.3e-65 Score=543.43 Aligned_cols=436 Identities=21% Similarity=0.287 Sum_probs=335.9
Q ss_pred CcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCC
Q 009485 47 SSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIET 126 (533)
Q Consensus 47 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~ 126 (533)
+.+.|++|+|+.|+..++ +|+......|.+|+.|+|++||+++|++|+++++|+++||||||+.+.+...
T Consensus 12 ~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~---- 81 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND---- 81 (459)
T ss_dssp CSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS----
T ss_pred CCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC----
Confidence 467899999999998643 4776667799999999999999999999999999999999999998876433
Q ss_pred CeEEEEcCCCCcEEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCCccccCcccccee
Q 009485 127 PFIVVDLARLRSVNVDINQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGIGADNVL 206 (533)
Q Consensus 127 ~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~ 206 (533)
++++|||++|++|++|+++.+|+||||++|.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+++|+|+
T Consensus 82 ~gvvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~ 159 (459)
T 2bvf_A 82 GGIVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNIL 159 (459)
T ss_dssp SSEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEE
T ss_pred CeEEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEE
Confidence 57999999999999999999999999999999999999987 7788899999999999999999999999999999999
Q ss_pred eeEEEccCCceec-ccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecchhhHH--HHHHHHHHHHHhh
Q 009485 207 DARIVDARGRVLD-RAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTLEQGAT--NILYKWQQVADKL 283 (533)
Q Consensus 207 ~~~vV~~~G~~~~-~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 283 (533)
++|||++||++++ ...+|+||||++|||+ |+|||||+++||++|.|+......+.|+.. ... ++++.|+++....
T Consensus 160 ~~~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 237 (459)
T 2bvf_A 160 GATLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEM 237 (459)
T ss_dssp EEEEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhC
Confidence 9999999999997 5557899999999987 899999999999999976666666666543 244 7888899988777
Q ss_pred cccceEEEEEeeccccccCCceEEEEEEEEEeCCHhHHHHHHHhhCccCC-CCcccceecChHHHHHHhcCCCCCCChhh
Q 009485 284 DEDLFIRVLIQGSAAAQKVNRTVTTSYNALFLGVADRLLQVMQKSFPELG-LSRQDCIETSWIKSVIYIAGFPSNSTPEF 362 (533)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (533)
|+.+...+ .... ...+. ..+.+...|.|+.++..+.+.+ |..++ ....++..++|.+...... ..
T Consensus 238 ~~~~~~~~-~~~~--~~~~~--~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 303 (459)
T 2bvf_A 238 ADHIYPSV-FVGV--DENRA--PSVTVCVGHLGGLDIAERDIAR-LRGLGRTVSDSIAVRSYDEVVALNA--------EV 303 (459)
T ss_dssp TTTCCCEE-EEEE--CTTCC--EEEEEEEECCSCHHHHHHHHHH-HHTTSCCSEECCEEECHHHHHHHHH--------HH
T ss_pred cHhhcccc-ccCc--ccCCC--ceEEEEEEEeCCHHHHHHHHHH-HHHhCcchhcceeecCHHHHHhccc--------cc
Confidence 77764333 2111 01122 3455667889998776666654 33343 2334456678876443311 00
Q ss_pred cccCCCCCccccee-ccccccCCCCHHHHHHHHHHHhcCC-Cc-EEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEee
Q 009485 363 LLQGKAMPKAYFKA-KSDFVRTPIPTKALGGLWRRFLAED-GP-LMIWNPYGGMMSKIPENAIPFPHRKGTLFKIQYVTL 439 (533)
Q Consensus 363 ~~~~~~~~~~~f~~-~s~~~~~~l~~~~i~~~~~~~~~~~-~~-~i~~~~~Gg~~~~~~~~~taf~~R~~~~~~i~~~~~ 439 (533)
. .... ....+.. ++.++.+.++.+.++.+++.+.+.+ .. .+.++.+||++.+ .+.++|+||+. .+ +++...
T Consensus 304 ~-~~~~-~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~~-~~-~~~~~~ 377 (459)
T 2bvf_A 304 G-SFED-GMSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRDA-MG-VLALAE 377 (459)
T ss_dssp S-CCCC-SCEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCSS-CE-EEEEEE
T ss_pred c-cCCC-CCcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCCc-ce-EEEEEE
Confidence 0 0000 1112222 4556553355566666666655433 33 3445555887766 56789999994 67 888999
Q ss_pred cCCChh-HHHHHHHHHHHHHHhccccccCCCCccccccCCCccCCCCCCCcchhhhhhhhhhhcccc-HHHHHHhhhccC
Q 009485 440 WLDGEK-SQNKHMNWIRNLYNYMAPYVSRFPRAAYVNYRDLDLGMNNKCNASFNQARIWGVKYFKNN-FYRLVRVKTKVD 517 (533)
Q Consensus 440 W~~~~~-~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~~~~~~~~~~~~~~~~~~~yyG~n-~~RL~~IK~kyD 517 (533)
|.+ +. .++.+.+|++.+++.+.|+......|+|+||+|.+. .+|++.|||+| |+||++||+|||
T Consensus 378 w~~-~~~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~kyD 443 (459)
T 2bvf_A 378 WSG-AAPGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREYD 443 (459)
T ss_dssp ECT-TSTTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred eCC-CccchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHhC
Confidence 973 33 556678999999999998842113589999999862 27999999986 999999999999
Q ss_pred CCCccccCCCCCC
Q 009485 518 PGNFFRHEQSIPT 530 (533)
Q Consensus 518 P~nvF~~~qsI~~ 530 (533)
|+|+|+++|+|+|
T Consensus 444 P~~vF~~~~~I~p 456 (459)
T 2bvf_A 444 PENRFRHNYNIDP 456 (459)
T ss_dssp TTCCCCSSSCCCC
T ss_pred cccccCCCCCCCC
Confidence 9999999999997
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.6e-41 Score=369.29 Aligned_cols=219 Identities=18% Similarity=0.231 Sum_probs=174.4
Q ss_pred chhhhHHHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHh--c-C
Q 009485 27 SVQRTFLYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKR--L-G 103 (533)
Q Consensus 27 ~~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~--~-~ 103 (533)
...+++.+||++.. +.+.|.+ ++..+.. +...|+......|.+|++|+|++||+++|++|++ + +
T Consensus 29 ~~~~~~~~~l~~~~------~~~~v~~-~~~~~~~------~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~ 95 (534)
T 1w1o_A 29 DRGRPWPASLAALA------LDGKLRT-DSNATAA------ASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWP 95 (534)
T ss_dssp -----------CTT------TTTCEEC-SHHHHHH------TSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCC
T ss_pred cchHHHHHHHHhcC------CCceEec-CHHHHHH------HhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCC
Confidence 35678899998843 1456665 2222222 2234666667799999999999999999999998 6 9
Q ss_pred CeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcE------EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecC-CC
Q 009485 104 IHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSV------NVDINQNTAWVQAGATVGELYYRIYEKSNIHGFPA-GL 176 (533)
Q Consensus 104 ~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i------~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~-G~ 176 (533)
+|++++|||||+.|.+.+. ++++|||++||+| ++|+++.+++||||+++.+|++++.++|+ .++. +.
T Consensus 96 ~~v~~~G~G~~~~g~~~~~----~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl--~~~~~~~ 169 (534)
T 1w1o_A 96 YTIAFRGRGHSLMGQAFAP----GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGV--APRSWTD 169 (534)
T ss_dssp CCEEEESSCCCSSSTTCCT----TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTE--EESCCCS
T ss_pred ceEEEECCCCCCCCCcCCC----CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCC--cccCCCC
Confidence 9999999999999877654 5799999999984 88888899999999999999999999984 4443 44
Q ss_pred CCCccccccccCCCCCCCccccCccccceeeeEEEccCCceec-ccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCce
Q 009485 177 CTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVLD-RAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPAT 255 (533)
Q Consensus 177 ~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~ 255 (533)
+..++|||.+++||.|.++++||.++|+|+++|||++||++++ ...+|+||||++|||+ |+|||||+++||++|.|+.
T Consensus 170 ~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~ 248 (534)
T 1w1o_A 170 YLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPAR 248 (534)
T ss_dssp SCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSE
T ss_pred CCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcc
Confidence 4678999999999999999999999999999999999999997 5557899999999987 8999999999999999987
Q ss_pred EEEEEEEecc
Q 009485 256 VTVFTVSKTL 265 (533)
Q Consensus 256 ~~~~~~~~~~ 265 (533)
..++.+.|..
T Consensus 249 ~~~~~~~~~~ 258 (534)
T 1w1o_A 249 ARWVRFVYTD 258 (534)
T ss_dssp EEEEEEEESC
T ss_pred eEEEEEEeCC
Confidence 7666666653
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=6.7e-34 Score=307.91 Aligned_cols=197 Identities=23% Similarity=0.286 Sum_probs=166.1
Q ss_pred cccCCCCCCCccEEEecCCHHHHHHHHHHHHh-cCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeC-----
Q 009485 70 LRYLQPSVPKPEFIFTPLYESHVQAAVICSKR-LGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDI----- 143 (533)
Q Consensus 70 ~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~-~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~----- 143 (533)
..|.......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+... ++|+|||++||+|+++.
T Consensus 52 ~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~----~gvvidl~~m~~i~i~~~~~~~ 127 (524)
T 2exr_A 52 RDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAE----GGLVVDMSTTAENHFEVGYLSG 127 (524)
T ss_dssp CCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCT----TSEEEEGGGGTTSCEEEEECCS
T ss_pred ccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCC----CEEEEECcCCCCcEEeecccCC
Confidence 34666567799999999999999999999996 999999999999999877654 46999999999987776
Q ss_pred CC--CEEEEcCCCcHHHHHHHHH-HhCCceeec-CCCCCCccccccccCCCCCCCccccCccccceeeeEEEccCCceec
Q 009485 144 NQ--NTAWVQAGATVGELYYRIY-EKSNIHGFP-AGLCTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVLD 219 (533)
Q Consensus 144 ~~--~~v~v~aG~~~~~l~~~l~-~~g~~~~~~-~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~ 219 (533)
++ .+++||||+++.++++++. ++|+ .++ .+.+..++|||+++++|.|..+.+||.++|+|++++||++||++++
T Consensus 128 ~~~~~~v~v~aGv~~~~l~~~~l~~~Gl--~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~ 205 (524)
T 2exr_A 128 GDATAFVDVSGGALWEDVLKRCVSEYGL--APRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVT 205 (524)
T ss_dssp SSSSEEEEEETTCBHHHHHHHHHHHHSE--ECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEE
T ss_pred CCCceEEEEeCCcCHHHHHHHHHHHcCC--CCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEE
Confidence 55 7999999999999866655 8884 322 2445678999999999999999999999999999999999999997
Q ss_pred -ccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecchhhHHHHH
Q 009485 220 -RAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTLEQGATNIL 273 (533)
Q Consensus 220 -~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (533)
...+|+||||++|||. |+|||||+++||++|.|+...++.+.|...+.+.+.+
T Consensus 206 ~~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~ 259 (524)
T 2exr_A 206 CSEIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDA 259 (524)
T ss_dssp EESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHH
T ss_pred ECCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHH
Confidence 4456899999999987 8999999999999999997766667665433333333
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.9e-35 Score=313.41 Aligned_cols=204 Identities=25% Similarity=0.295 Sum_probs=176.2
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEE
Q 009485 71 RYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSV-NVDINQNTAW 149 (533)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i-~~d~~~~~v~ 149 (533)
.|+......|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.+.+ ++++|||++||+| ++|+++.+++
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~---ggvvIdl~~m~~i~~id~~~~~v~ 119 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN---GEVVISLKRMDKIREIDTSSNTIT 119 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS---SCEEEECTTCCCEEEEETTTTEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC---CcEEEEeeCCCceEEEcCCCCeEE
Confidence 47655677999999999999999999999999999999999999998877642 4799999999998 8999999999
Q ss_pred EcCCCcHHHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCCccccCccccceeeeEEEccCCceec------ccCC
Q 009485 150 VQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVLD------RAAM 223 (533)
Q Consensus 150 v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~------~~~~ 223 (533)
||||+++.+|++++.++|+.+.+.++++..++|||++.+++.|..+.+||.++|+|++++||++||++++ +...
T Consensus 120 V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~ 199 (476)
T 3pm9_A 120 VEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNT 199 (476)
T ss_dssp EETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCS
T ss_pred ECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCC
Confidence 9999999999999999985444445777789999999999999999999999999999999999999985 2335
Q ss_pred CcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecchhhHHHHHHHHHH
Q 009485 224 GEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTLEQGATNILYKWQQ 278 (533)
Q Consensus 224 ~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (533)
++||+|+++|+. |+|||||+++||++|.|+......+.|+..+++.+++..+++
T Consensus 200 g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 200 GYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp SCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 789999999887 899999999999999998776666666544444455555543
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=3.3e-35 Score=326.26 Aligned_cols=240 Identities=21% Similarity=0.236 Sum_probs=195.4
Q ss_pred hhhhHHHHhccCcCCCCCCCcceEECCCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEE
Q 009485 28 VQRTFLYCLSFNANNLSTPSSTYFYTPNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLR 107 (533)
Q Consensus 28 ~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 107 (533)
+.++|+..|+......|..-..++.-....+|.+..+ . |....+..|.+||+|+|++||+++|++|+++++||+
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~r~~h~~g~s~~d~~~--~----~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVv 233 (658)
T 4bby_A 160 VNEDFLHELKKTNISYSQEADDRVFRAHGHCLHEIFL--L----REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCII 233 (658)
T ss_dssp CCHHHHHHHHHHTCEEECCHHHHHHTSCCSCHHHHHH--H----HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHhcccccCchHHHhhhcCCCCHHHHHH--H----hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEE
Confidence 4567777776644222222233455555667777654 2 445556699999999999999999999999999999
Q ss_pred EEeCCcCCCCCcccc-CCCCCeEEEEcCCCCcE-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCcccccc
Q 009485 108 VRSGGHDYEGLSYAS-EIETPFIVVDLARLRSV-NVDINQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGH 185 (533)
Q Consensus 108 ~~ggGh~~~g~s~~~-~g~~~gvvIdl~~~~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~ 185 (533)
++||||++.|.+.+. +...++|+|||++||+| +||+++++++||||+++.+|.++|.++|+.+.+.+++...++|||+
T Consensus 234 prGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~ 313 (658)
T 4bby_A 234 PIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGW 313 (658)
T ss_dssp EESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHH
T ss_pred EECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeeh
Confidence 999999988665542 22246799999999998 8999999999999999999999999999665556788888999999
Q ss_pred ccCCCCCCCccccCccccceeeeEEEccCCceec-----ccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEE
Q 009485 186 ITGGAYGSMMRKYGIGADNVLDARIVDARGRVLD-----RAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFT 260 (533)
Q Consensus 186 ~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-----~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~ 260 (533)
+++|+.|+.+.+||.+.|+|+++|||++||++++ +...+|||+|+++|+. |+|||||+++||++|.|+....+.
T Consensus 314 iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aGyDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~ 392 (658)
T 4bby_A 314 ISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGS 392 (658)
T ss_dssp HHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSSSCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEE
T ss_pred hhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCCcCHHHHhccCC-CcCcceeeeeeeeccCCccccccc
Confidence 9999999999999999999999999999999985 2345799999999887 899999999999999999877777
Q ss_pred EEecchhhHHHHHH
Q 009485 261 VSKTLEQGATNILY 274 (533)
Q Consensus 261 ~~~~~~~~~~~~~~ 274 (533)
+.|+..+++.+++.
T Consensus 393 ~~f~d~~~a~~av~ 406 (658)
T 4bby_A 393 VAFPNFEQGVACLR 406 (658)
T ss_dssp EEESSHHHHHHHHH
T ss_pred cccCCchhhhhhHH
Confidence 77764333334443
No 15
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=3e-32 Score=291.22 Aligned_cols=199 Identities=17% Similarity=0.236 Sum_probs=167.1
Q ss_pred cccCCCCCCCccEEEecCCHHHHHHHHHHHHhc--CCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCC
Q 009485 70 LRYLQPSVPKPEFIFTPLYESHVQAAVICSKRL--GIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSV-NVDINQN 146 (533)
Q Consensus 70 ~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~--~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i-~~d~~~~ 146 (533)
.+|.. ....|.+|+.|+|++||+++|++|+++ ++|+.++|+|||+.+.+... ++++|||++||+| ++|++++
T Consensus 34 ~~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~----~gvvIdl~~l~~i~~~d~~~~ 108 (481)
T 4feh_A 34 TGWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG----GGLVIDMTPLNTIHSIDADTK 108 (481)
T ss_dssp CCTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT----TSEEEECTTCCCEEEEETTTT
T ss_pred ecccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc----CeEEEECccCCCceEEcCCCC
Confidence 35754 478999999999999999999999999 79999999999997665433 5799999999998 9999999
Q ss_pred EEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCCccccCccccceeeeEEEccCCceec-ccC-CC
Q 009485 147 TAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVLD-RAA-MG 224 (533)
Q Consensus 147 ~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~-~~ 224 (533)
+|+||||+++.+|++.|.++|+.+...+|. ..++|||.+++|++|..++.||..+|+|++++||++||++++ +.. +|
T Consensus 109 ~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~ 187 (481)
T 4feh_A 109 LVDIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGED 187 (481)
T ss_dssp EEEEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTT
T ss_pred EEEEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCC
Confidence 999999999999999999998543322444 567899999999999999999999999999999999999997 444 68
Q ss_pred cchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEE-EEEecchhhHHHHHHHHHH
Q 009485 225 EDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVF-TVSKTLEQGATNILYKWQQ 278 (533)
Q Consensus 225 ~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 278 (533)
+||||++|||. |++||||+++||++|.|+..... ...+ ....++++.|.+
T Consensus 188 ~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~~~~~---~~l~~~~~~~~~ 238 (481)
T 4feh_A 188 AELFWATVGGN-GLTGIIMRATIEMTPTSTAYFIADGDVT---ASLDETIALHSD 238 (481)
T ss_dssp HHHHHHHTTCT-TTTCEEEEEEEECEECSCSEEEEEEEEC---SSHHHHHHHHSS
T ss_pred hHHHHHhhccC-CCceEEEEEEEEEEeCCccEEEEEEEeC---CCHHHHHHHHHH
Confidence 99999999987 89999999999999998643222 2222 234556655553
No 16
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=8.2e-32 Score=291.93 Aligned_cols=199 Identities=21% Similarity=0.259 Sum_probs=165.9
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCC-CCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEEEcCC
Q 009485 76 SVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYE-GLSYASEIETPFIVVDLARLRSV-NVDINQNTAWVQAG 153 (533)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~s~~~~g~~~gvvIdl~~~~~i-~~d~~~~~v~v~aG 153 (533)
....|.+||+|+|++||+++|++|+++++||+++|+|||+. |.+... ..++++|||++||+| ++|+++++++||||
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~--~~~gvvidl~~m~~i~~id~~~~~v~v~aG 130 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPV--QRGQVILDLKKMNKIIKIDPEMCYALVEPG 130 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCS--STTCEEEECTTCCCEEEEETTTTEEEECTT
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCC--CCCeEEEECCCCCceEEECCCCCEEEECCC
Confidence 34589999999999999999999999999999999999986 655431 125799999999999 99999999999999
Q ss_pred CcHHHHHHHHHHhCCceeecCC---CCCCccccccccCCCCCCCccccCccccceeeeEEEccCCceeccc---CCCcch
Q 009485 154 ATVGELYYRIYEKSNIHGFPAG---LCTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVLDRA---AMGEDL 227 (533)
Q Consensus 154 ~~~~~l~~~l~~~g~~~~~~~G---~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~~~---~~~~dl 227 (533)
+++.+|+++|.++|+. ++++ ....+||||++++||.|.. +||.++|+|++++||++||++++.. .+++|+
T Consensus 131 v~~~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l 206 (520)
T 1wvf_A 131 VTFGQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNT 206 (520)
T ss_dssp CCHHHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSC
T ss_pred CCHHHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchh
Confidence 9999999999999864 3433 3347889999999998885 9999999999999999999999632 357898
Q ss_pred HHHhhcCCC---------CceeEEEEEEEEEEeeCceEEEEEEEecchhhHHHHHHHHHHHH
Q 009485 228 FWAIRGGGG---------ASFGIILAWKVKLVPVPATVTVFTVSKTLEQGATNILYKWQQVA 280 (533)
Q Consensus 228 ~~a~rg~~~---------g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (533)
|++.|||.| ++|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 207 ~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 207 WQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred HhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 777776642 59999999999999999977677777765445555565666554
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=5.3e-32 Score=295.53 Aligned_cols=200 Identities=22% Similarity=0.245 Sum_probs=167.1
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEEEcCCC
Q 009485 76 SVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSV-NVDINQNTAWVQAGA 154 (533)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i-~~d~~~~~v~v~aG~ 154 (533)
....|.+||+|+|++||+++|++|+++++||+++|||||+.|.+.+.++..++|+|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 3458999999999999999999999999999999999999887765422235799999999998 899999999999999
Q ss_pred cHHHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCCccccCccccceeeeEEEccCCceec----ccCCCcchHHH
Q 009485 155 TVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVLD----RAAMGEDLFWA 230 (533)
Q Consensus 155 ~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~----~~~~~~dl~~a 230 (533)
++.+|.++|.++|+.+...+++...++|||++++|+.|+.+.+||.++|+|++++||++||++++ +...++||+|+
T Consensus 214 ~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~ 293 (584)
T 2uuu_A 214 MGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHI 293 (584)
T ss_dssp BHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHH
T ss_pred cHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhh
Confidence 99999999999985332223334568899999999999999999999999999999999999886 34468999999
Q ss_pred hhcCCCCceeEEEEEEEEEEeeCceEEEEEEEecchhhHHHHHHHH
Q 009485 231 IRGGGGASFGIILAWKVKLVPVPATVTVFTVSKTLEQGATNILYKW 276 (533)
Q Consensus 231 ~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (533)
++|+. |+|||||+++||++|.|+....+.+.|+..+++.+++..+
T Consensus 294 ~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 338 (584)
T 2uuu_A 294 ILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQI 338 (584)
T ss_dssp HTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred hccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHH
Confidence 99887 8999999999999999997766677675433333333333
No 18
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.97 E-value=4.1e-31 Score=279.48 Aligned_cols=175 Identities=20% Similarity=0.247 Sum_probs=155.4
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEE
Q 009485 71 RYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSV-NVDINQNTAW 149 (533)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i-~~d~~~~~v~ 149 (533)
.|+......|.+|++|+|++||+++|++| +|++++||||++.+.+... .++++|||++||+| ++|+++++|+
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~---~~g~vi~l~~l~~i~~~d~~~~~v~ 84 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG---DGGVLLSLAGLPSVVDVDTAARTVR 84 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC---TTCEEECSTTSCCCEEEETTTTEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC---CCcEEEEhhhCCCcEEEcCCCCEEE
Confidence 48777788999999999999999999998 8999999999998877621 25799999999997 9999999999
Q ss_pred EcCCCcHHHHHHHHHHhCCceeec-CCCCCCccccccccCCCCCCCccccCccccceeeeEEEccCCceec-ccCCCcch
Q 009485 150 VQAGATVGELYYRIYEKSNIHGFP-AGLCTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVLD-RAAMGEDL 227 (533)
Q Consensus 150 v~aG~~~~~l~~~l~~~g~~~~~~-~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl 227 (533)
||||+++.+|.++|.++|+ .++ .+.++.++|||.+++|++|.. .+||.++|+|+++++|++||++++ ...+|+
T Consensus 85 v~aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~-- 159 (422)
T 2vfr_A 85 VGGGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER-- 159 (422)
T ss_dssp EETTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--
T ss_pred EcCCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--
Confidence 9999999999999999985 444 478888999999999999986 799999999999999999999997 434455
Q ss_pred HHHhhcCCCCceeEEEEEEEEEEeeCceEEE
Q 009485 228 FWAIRGGGGASFGIILAWKVKLVPVPATVTV 258 (533)
Q Consensus 228 ~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~ 258 (533)
||+++|+. |++||||+++||++|.|+....
T Consensus 160 f~~~~g~~-G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 160 FGGAVTSL-GALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GGGTSSCT-TTTCEEEEEEEECEECCEEEEE
T ss_pred cceEEecC-CCCEEEEEEEEEEEecCceEEE
Confidence 89999887 8999999999999999876543
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=9.2e-30 Score=277.49 Aligned_cols=201 Identities=14% Similarity=0.121 Sum_probs=167.3
Q ss_pred cceEECC-CCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCC-C
Q 009485 48 STYFYTP-NTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEI-E 125 (533)
Q Consensus 48 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g-~ 125 (533)
.+.+++| +++.|+... ..|+.+....|.+|+.|+|++||+++|++|+++++|++++|+|||+.+.+...+. .
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4577888 999998753 3587777789999999999999999999999999999999999999765544321 1
Q ss_pred CCeEEEEc-CCCCcEEEeC--CCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCC--------
Q 009485 126 TPFIVVDL-ARLRSVNVDI--NQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSM-------- 194 (533)
Q Consensus 126 ~~gvvIdl-~~~~~i~~d~--~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~-------- 194 (533)
.++++||| ++||+|++|+ ++++|+||||+++.+|.++|.++|+.+...++ .+.++|||.+.+|++|.+
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~-~~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPA-PGVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCS-CTTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCC-CCCcccCCCcccCCcccccccCCccc
Confidence 25899999 8999999998 78899999999999999999999854433233 366889999888877775
Q ss_pred --ccccCccccceeeeEEEccCCc---eecccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEE
Q 009485 195 --MRKYGIGADNVLDARIVDARGR---VLDRAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTV 258 (533)
Q Consensus 195 --~~~~G~~~d~v~~~~vV~~~G~---~~~~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~ 258 (533)
+++||..+|+|++++||++||+ +++...+++||+|+++|.| . ||||+++||++|.++....
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEE
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEE
Confidence 7789999999999999999999 6654445899999999554 3 8999999999999875433
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=1.5e-28 Score=268.24 Aligned_cols=201 Identities=15% Similarity=0.112 Sum_probs=164.9
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCC-CCccccCCCCCeEEEEc-CCCCcE-EEeCCCCEEEEcC
Q 009485 76 SVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYE-GLSYASEIETPFIVVDL-ARLRSV-NVDINQNTAWVQA 152 (533)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~s~~~~g~~~gvvIdl-~~~~~i-~~d~~~~~v~v~a 152 (533)
....|.+||+|+|++||+++|++|+++++||++||+||++. |.+.+. ..++||||| ++||+| ++|+++++|+|||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~--~~~gvvidl~~~mn~il~id~~~~~v~v~a 144 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPR--VSGSVVLDMGKNMNRVLEVNVEGAYCVVEP 144 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCS--STTCEEEECTTTCCCEEEEETTTTEEEECT
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCC--cCCEEEEEchHhcCCeEEEcCCCCEEEEeC
Confidence 45689999999999999999999999999999999999986 654431 015799999 999999 9999999999999
Q ss_pred CCcHHHHHHHHHHhCCc--eeecCCCCCCccccccccCCCCCCCccccCccccceeeeEEEccCCceeccc---CCCc--
Q 009485 153 GATVGELYYRIYEKSNI--HGFPAGLCTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVLDRA---AMGE-- 225 (533)
Q Consensus 153 G~~~~~l~~~l~~~g~~--~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~~~---~~~~-- 225 (533)
|+++.+|.++|.++|+. +.+.+++...+||||++++||.|+. +||..+|+|++++||++||++++.. ..++
T Consensus 145 Gv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~ 222 (560)
T 1e8g_A 145 GVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKR 222 (560)
T ss_dssp TCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCC
T ss_pred CCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccc
Confidence 99999999999999975 5444455557889999999998875 9999999999999999999999632 2231
Q ss_pred -------------chHHHhhcC----------CCCceeEEEEEEEEEEeeCceEEEEEEEecchhhHHHHHHHHHHHH
Q 009485 226 -------------DLFWAIRGG----------GGASFGIILAWKVKLVPVPATVTVFTVSKTLEQGATNILYKWQQVA 280 (533)
Q Consensus 226 -------------dl~~a~rg~----------~~g~~GiVt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (533)
+++|+++++ .+|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 223 ~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 223 PETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 566766643 2479999999999999999987777777765455555666666654
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=9.2e-29 Score=264.51 Aligned_cols=190 Identities=16% Similarity=0.172 Sum_probs=155.7
Q ss_pred CCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCC-CCCeEEEEcC
Q 009485 56 TRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEI-ETPFIVVDLA 134 (533)
Q Consensus 56 ~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g-~~~gvvIdl~ 134 (533)
-+.|.... .+|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+.++..+. ..++|+|||+
T Consensus 12 i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls 85 (540)
T 3js8_A 12 IPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTT 85 (540)
T ss_dssp SCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETT
T ss_pred cchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECc
Confidence 35665542 2488888889999999999999999999999999999999999999644322210 1368999995
Q ss_pred -CCCcEEEeCC--CCEEEEcCCCcHHHHHHHHHHhCCceeecC-CCCCCccccccccCCCCCCC----------ccccCc
Q 009485 135 -RLRSVNVDIN--QNTAWVQAGATVGELYYRIYEKSNIHGFPA-GLCTSLGIGGHITGGAYGSM----------MRKYGI 200 (533)
Q Consensus 135 -~~~~i~~d~~--~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~-G~~~~vgvgG~~~ggg~g~~----------~~~~G~ 200 (533)
+||+|++|++ .++|+||||+++.+|+++|.++|+ .++. +.++.++|||.+++|++|.. +++||.
T Consensus 86 ~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL--~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~ 163 (540)
T 3js8_A 86 RYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGL--GVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGS 163 (540)
T ss_dssp TTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTTE--ECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSC
T ss_pred CcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcCC--EEEecCCCCCeEEcccccCCCCccccccccccccccccccc
Confidence 7999999975 579999999999999999999984 4442 33466899999999999986 689999
Q ss_pred cccceeeeEEEccCCc-----eecccCCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceE
Q 009485 201 GADNVLDARIVDARGR-----VLDRAAMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATV 256 (533)
Q Consensus 201 ~~d~v~~~~vV~~~G~-----~~~~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~ 256 (533)
.+|+|++++||++||+ +++...+++|| |++|+|+ |+ ||||+++||++|.+...
T Consensus 164 ~~D~V~~levV~adG~~~~~~i~~~s~~~~DL-~a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 164 ISNLVLSLTAVVYDKASGAYALRKFARNDPQI-APLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp GGGGEEEEEEEEEETTTTEEEEEEEETTSGGG-HHHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred HHHhEEEEEEEcCCCCCceeeEEEeCCCChhH-HHHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 9999999999999998 66544468998 5666666 56 69999999999988644
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=1.6e-28 Score=266.34 Aligned_cols=197 Identities=11% Similarity=0.081 Sum_probs=162.9
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCC--CeEEEEcCCCCcE-EEeCCCCEEEEcC
Q 009485 76 SVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIET--PFIVVDLARLRSV-NVDINQNTAWVQA 152 (533)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~--~gvvIdl~~~~~i-~~d~~~~~v~v~a 152 (533)
....|.+||+|+|++||+++|++|+++++||+++||||++.|.+.+.+++. ++++|||++||+| ++|+ +++|+|+|
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 356899999999999999999999999999999999999998877653111 3899999999999 7984 57999999
Q ss_pred CCcHHHHHHHHHHhCCceeecC---CCCCCccccccccCCCCCCCccccCcccc----------------ceeeeEEEcc
Q 009485 153 GATVGELYYRIYEKSNIHGFPA---GLCTSLGIGGHITGGAYGSMMRKYGIGAD----------------NVLDARIVDA 213 (533)
Q Consensus 153 G~~~~~l~~~l~~~g~~~~~~~---G~~~~vgvgG~~~ggg~g~~~~~~G~~~d----------------~v~~~~vV~~ 213 (533)
|+++.+|.++|.++|+ .++. ++|..++|||.+++|++|..+.+||..+| +|++++||++
T Consensus 121 Gv~l~~L~~~l~~~Gl--~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGR--EPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp TCBHHHHHHHHGGGTE--ECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred CcCHHHHHHHHHhcCc--cCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 9999999999999984 3332 34456789999999999999999999999 9999999999
Q ss_pred CCceec-c-----------------cCCCc-----------------chHHHh--hcCCCCceeEEEEEEEEEEeeCceE
Q 009485 214 RGRVLD-R-----------------AAMGE-----------------DLFWAI--RGGGGASFGIILAWKVKLVPVPATV 256 (533)
Q Consensus 214 ~G~~~~-~-----------------~~~~~-----------------dl~~a~--rg~~~g~~GiVt~~~l~~~~~~~~~ 256 (533)
||++++ . ...++ ||+|++ +|+. |+||| |+++||++|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeE
Confidence 999985 1 12233 998888 9887 89999 99999999999877
Q ss_pred EEEEEEecchhhHHHHHHHHH
Q 009485 257 TVFTVSKTLEQGATNILYKWQ 277 (533)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~ 277 (533)
..+.+.++..+++.+++..+.
T Consensus 277 ~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 277 QVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHH
Confidence 666666654344444444443
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.92 E-value=1.6e-25 Score=226.77 Aligned_cols=164 Identities=18% Similarity=0.134 Sum_probs=132.6
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCc
Q 009485 76 SVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~ 155 (533)
....|.+++.|+|++||+++|++|+++++|+.++|+|||+.+.+.. .+++||||++|++|++| +.+++|+||++
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~----~~gvvI~l~~~~~I~~d--~~~v~v~aG~~ 124 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGG----IRGVILHLDLLQTIERN--NTQIVAMSGAK 124 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTC----EEEEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCC----CCeEEEECCCCCcEEEC--CCEEEEecCcC
Confidence 4568999999999999999999999999999999999998743222 25899999999999876 45999999999
Q ss_pred HHHHHHHHHHhCC-ceeecCCCCCCccccccccCCCCCCCcccc-CccccceeeeEEEccCCceecccCCCcchHHHhhc
Q 009485 156 VGELYYRIYEKSN-IHGFPAGLCTSLGIGGHITGGAYGSMMRKY-GIGADNVLDARIVDARGRVLDRAAMGEDLFWAIRG 233 (533)
Q Consensus 156 ~~~l~~~l~~~g~-~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~-G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rg 233 (533)
|.+|.+++.++|+ ++.++.|.+++ |||.+..++ +.| |.++|+|++++||++||++++.. .+|++|+||+
T Consensus 125 ~~~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~Na-----GgyGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~ 195 (322)
T 3tx1_A 125 LIDTAKFALNESLSGLEFACGIPGS--IGGALHMNA-----GAYGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRF 195 (322)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTC-----EETTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-
T ss_pred HHHHHHHHHHcCCcccccCCCCcch--hHHHHHhCc-----cCcccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhh
Confidence 9999999999986 44566676654 445444332 235 68899999999999999999744 3599999998
Q ss_pred CCCC-ceeEEEEEEEEEEeeCc
Q 009485 234 GGGA-SFGIILAWKVKLVPVPA 254 (533)
Q Consensus 234 ~~~g-~~GiVt~~~l~~~~~~~ 254 (533)
+..+ .+||||+++||++|.|+
T Consensus 196 s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 196 STIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp CTTTGGGCEEEEEEEECEECCH
T ss_pred cccCCCCEEEEEEEEEEEeCCH
Confidence 7544 57899999999999863
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=2.2e-25 Score=227.97 Aligned_cols=165 Identities=14% Similarity=0.020 Sum_probs=144.8
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeC--CCCEEEEcCC
Q 009485 76 SVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDI--NQNTAWVQAG 153 (533)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~--~~~~v~v~aG 153 (533)
....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+. . +|+||+++ |++|+++. ++.+++|+||
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~----~GvVI~l~-~~~i~v~~~~~~~~v~v~AG 100 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-Y----TGMIVVNR-LNGIEHQQDDDYHRLHVAGG 100 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-E----EEEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-C----CeEEEEcC-CCceEEeccCCceEEEEeCC
Confidence 456889999999999999999999999999999999999875432 2 58999998 99998753 4568999999
Q ss_pred CcHHHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCCccccCc-cccceeeeEEEcc-CCceecccCCCcchHHHh
Q 009485 154 ATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGI-GADNVLDARIVDA-RGRVLDRAAMGEDLFWAI 231 (533)
Q Consensus 154 ~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~~~~~~~~~~dl~~a~ 231 (533)
++|.+|.+++.++|+ .|.++.+||+|.+ ||+.+++++.||. ++|+|+++++|++ +|++++.. +.|++|+|
T Consensus 101 ~~~~~l~~~a~~~Gl-----~GlE~l~gIPGtV-GGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~Y 172 (357)
T 3i99_A 101 EDWPSLVSWCVEQGI-----GGLENLALIPGCA-GSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGY 172 (357)
T ss_dssp SBHHHHHHHHHHTTC-----TTCGGGTTCCSBG-GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBT
T ss_pred CcHHHHHHHHHHcCC-----cCccccCCCCchh-HHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccc
Confidence 999999999999984 5888888898876 9999999999997 8999999999999 99999754 45999999
Q ss_pred hcCCC----CceeEEEEEEEEEEeeCc
Q 009485 232 RGGGG----ASFGIILAWKVKLVPVPA 254 (533)
Q Consensus 232 rg~~~----g~~GiVt~~~l~~~~~~~ 254 (533)
|++.. +++||||+++||++|.++
T Consensus 173 R~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 173 RDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 98754 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=9.8e-25 Score=222.21 Aligned_cols=160 Identities=21% Similarity=0.202 Sum_probs=132.9
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCc
Q 009485 76 SVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~ 155 (533)
....|.+|++|+|++||+++|++|+++++|++++|||||+.+.+.+. ++++|||++|++|++| +.+++||||++
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~----~gvvI~l~~m~~i~id--~~~v~v~aGv~ 118 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGI----RGIVISLLSLDHIEVS--DDAIIAGSGAA 118 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCE----EEEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCC----CeEEEEeCCCCceEEc--CCEEEEeCCCc
Confidence 45689999999999999999999999999999999999987554332 4799999999999887 36999999999
Q ss_pred HHHHHHHHHHhCC-ceeecCCCCCCccccccccCCCCCCCccccC-ccccceeeeEEEccCCceecccCCCcchHHHhhc
Q 009485 156 VGELYYRIYEKSN-IHGFPAGLCTSLGIGGHITGGAYGSMMRKYG-IGADNVLDARIVDARGRVLDRAAMGEDLFWAIRG 233 (533)
Q Consensus 156 ~~~l~~~l~~~g~-~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rg 233 (533)
+.+|.+++.++|+ ++...++.++ +|||.+.+++.| || .++|+|++++||++||++++... .|++|+||+
T Consensus 119 ~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~ 189 (326)
T 1hsk_A 119 IIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRN 189 (326)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTB
T ss_pred HHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccc
Confidence 9999999999985 3334455443 466766655443 88 89999999999999999997443 388999997
Q ss_pred CC---CCceeEEEEEEEEEEee
Q 009485 234 GG---GASFGIILAWKVKLVPV 252 (533)
Q Consensus 234 ~~---~g~~GiVt~~~l~~~~~ 252 (533)
.. +| ||||+++||++|.
T Consensus 190 ~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 190 SIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp CHHHHTT--CEEEEEEEECEEC
T ss_pred cccCCCC--EEEEEEEEEEEcC
Confidence 42 23 9999999999997
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=8.6e-24 Score=215.58 Aligned_cols=165 Identities=15% Similarity=0.046 Sum_probs=142.8
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcEE-EeCCC-CEEEEcCC
Q 009485 76 SVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSVN-VDINQ-NTAWVQAG 153 (533)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~-~d~~~-~~v~v~aG 153 (533)
....|.+++.|+|++||+++|++|+++++|+.++|||||+.+.+. .+|+||+++ |+++. ++.++ .+++|+||
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-----~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG 84 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-----YRGTVIINR-IKGIEIHDEPDAWYLHVGAG 84 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-----EEEEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-----CCeEEEEcc-CCCcEEEecCCCeEEEEecC
Confidence 345799999999999999999999999999999999999875432 258999996 99984 56666 68999999
Q ss_pred CcHHHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCCccccCc-cccceeeeEEEcc-CCceecccCCCcchHHHh
Q 009485 154 ATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGI-GADNVLDARIVDA-RGRVLDRAAMGEDLFWAI 231 (533)
Q Consensus 154 ~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~~~~~~~~~~dl~~a~ 231 (533)
++|.+|.+++.++|+ .|.+..+||+|.+ ||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|+|
T Consensus 85 ~~~~~l~~~~~~~Gl-----~Gle~~~gIPGtV-GGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gY 156 (340)
T 1uxy_A 85 ENWHRLVKYTLQEGM-----PGLENLALIPGCV-GSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGY 156 (340)
T ss_dssp SBHHHHHHHHHHTTC-----CSCGGGTTCCSBG-GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBT
T ss_pred CCHHHHHHHHHHCCC-----CccccccCCccch-hHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhcccc
Confidence 999999999999984 6778888898866 9999999999996 8999999999996 99998754 35999999
Q ss_pred hcCCC----CceeEEEEEEEEEEeeCc
Q 009485 232 RGGGG----ASFGIILAWKVKLVPVPA 254 (533)
Q Consensus 232 rg~~~----g~~GiVt~~~l~~~~~~~ 254 (533)
|++.. +++||||+++||+.|.+.
T Consensus 157 R~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 157 RDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 98742 258999999999999763
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=1.2e-22 Score=200.10 Aligned_cols=153 Identities=20% Similarity=0.196 Sum_probs=129.5
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEcCCCcH
Q 009485 77 VPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSVNVDINQNTAWVQAGATV 156 (533)
Q Consensus 77 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~ 156 (533)
...|. +++|+|++||+++| ++|+.++|+|||+.+.+.+. .+++||++++|++|++| + +|+||++|
T Consensus 20 gg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~---~~GvVI~l~~~~~I~vd--~---~v~aG~~~ 84 (268)
T 2gqt_A 20 GGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGV---PERVIRLAGEFQTYDLK--G---WVGAGTLL 84 (268)
T ss_dssp CCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCC---SSEEEEECGGGGCBCTT--S---EEETTSBH
T ss_pred CcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCc---CCeEEEEcCCCCCcEEc--C---EEECCCCH
Confidence 34566 99999999999999 89999999999987543322 23899999999999765 2 99999999
Q ss_pred HHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCCccccC-ccccceeeeEEEccCCceecccCCCcchHHHhhcCC
Q 009485 157 GELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYG-IGADNVLDARIVDARGRVLDRAAMGEDLFWAIRGGG 235 (533)
Q Consensus 157 ~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rg~~ 235 (533)
.+|.+++.++| + .|.++.+|++|.+ ||+..++++.|| .++|+|+++++| +||++++.. +.|++|+||++.
T Consensus 85 ~~l~~~~~~~G--l---~Gle~~~giPGtv-GGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~ 155 (268)
T 2gqt_A 85 PLLVQEAARAG--L---SGLEGLLGIPAQV-GGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSH 155 (268)
T ss_dssp HHHHHHHHHTT--E---ESCGGGTTCCCBH-HHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCC
T ss_pred HHHHHHHHHcC--C---cCCccccCccchh-HHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCC
Confidence 99999999998 3 4778888899865 999999999999 689999999999 999999754 358999999876
Q ss_pred CCceeEEEEEEEEEEeeC
Q 009485 236 GASFGIILAWKVKLVPVP 253 (533)
Q Consensus 236 ~g~~GiVt~~~l~~~~~~ 253 (533)
...-||||+++||++|.+
T Consensus 156 ~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 156 LPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp CSTTCEEEEEEECCEECC
T ss_pred cCCCceEEEEEEEEEeCC
Confidence 321249999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.78 E-value=2.8e-19 Score=171.15 Aligned_cols=118 Identities=19% Similarity=0.218 Sum_probs=99.3
Q ss_pred EEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceeecCCCCCCccccccccCCCCCCCccccCccccceeeeEEEccCCcee
Q 009485 139 VNVDINQNTAWVQAGATVGELYYRIYEKSNIHGFPAGLCTSLGIGGHITGGAYGSMMRKYGIGADNVLDARIVDARGRVL 218 (533)
Q Consensus 139 i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~G~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~ 218 (533)
+++|+++++|+|+||+++.+|++++.++|+.+...+|+++. +|||++.+|++| ++||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 46889999999999999999999999998433222355555 999999999998 899999 9999999999999998
Q ss_pred c-cc-----CCCcchHHHhhcCCCCceeEEEEEEEEEEeeCceEEEEEEE
Q 009485 219 D-RA-----AMGEDLFWAIRGGGGASFGIILAWKVKLVPVPATVTVFTVS 262 (533)
Q Consensus 219 ~-~~-----~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~~~~~~~~~~~~ 262 (533)
+ .. ..++||||+++|+. |+|||||+++||++|.|+....+.+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 6 21 24589999999886 89999999999999998866554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.31 E-value=7.7e-07 Score=88.49 Aligned_cols=155 Identities=18% Similarity=0.166 Sum_probs=101.7
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCC---CCcEEEeCCCCEEEEcCCCc
Q 009485 79 KPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLAR---LRSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~---~~~i~~d~~~~~v~v~aG~~ 155 (533)
.+.-++.|+|.+|+.++++. ++.+..+.|||++..-. ........+++||+++ |+.|+.+ ++.+++|||++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~-~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~t 77 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPM-MKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTV 77 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHH-HHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCB
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHH-HhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCc
Confidence 45568999999999999875 34679999999996421 0011112579999985 6777664 45799999999
Q ss_pred HHHHHHH-HHHhCC-ceee----cCCCC--CCccccccccCCCCCCCccccCcccccee-------eeEEEccCCceecc
Q 009485 156 VGELYYR-IYEKSN-IHGF----PAGLC--TSLGIGGHITGGAYGSMMRKYGIGADNVL-------DARIVDARGRVLDR 220 (533)
Q Consensus 156 ~~~l~~~-l~~~g~-~~~~----~~G~~--~~vgvgG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~~~~~ 220 (533)
+.+|.+. +.++++ ++.. ..|.. +..+|||.+..+.. .+|.+. .+++..++| ..+.
T Consensus 78 l~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r~i 147 (287)
T 1ffv_C 78 ENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RRTV 147 (287)
T ss_dssp HHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EEEE
T ss_pred HHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eEEE
Confidence 9999963 334433 2111 12221 23568999876632 356554 588899999 3433
Q ss_pred cCCCcchHHHhhcCCCCceeEEEEEEEEEEe
Q 009485 221 AAMGEDLFWAIRGGGGASFGIILAWKVKLVP 251 (533)
Q Consensus 221 ~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~ 251 (533)
+. .|+|+.+|-.....-.|||+++|...+
T Consensus 148 ~~--~df~~g~~~t~l~~~eii~~i~ip~~~ 176 (287)
T 1ffv_C 148 PA--DGFFLGTYMTLLEENEVMVEIRVPAFA 176 (287)
T ss_dssp ES--TTTEEETTEESCCTTCEEEEEEEECCC
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEecCCC
Confidence 32 388888873222223599999997665
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.60 E-value=9.7e-05 Score=73.28 Aligned_cols=155 Identities=21% Similarity=0.141 Sum_probs=95.0
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCC---CCcEEEeCCCCEEEEcCCCc
Q 009485 79 KPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLAR---LRSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~---~~~i~~d~~~~~v~v~aG~~ 155 (533)
.+.-++.|+|.+|+.++++. ++-+..+.+|||+..-.- ........++||+++ |+.|+. +++.+++||+++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~-k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t 77 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIM-KTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTT 77 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHH-HTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCB
T ss_pred CceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHH-hcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCc
Confidence 45568999999999998863 244688999999953210 000012469999986 466665 455899999999
Q ss_pred HHHHHH--HHHHhCCceeecCCCC------CCccccccccCCCCCCCccccCcccccee-------eeEEEccCCceecc
Q 009485 156 VGELYY--RIYEKSNIHGFPAGLC------TSLGIGGHITGGAYGSMMRKYGIGADNVL-------DARIVDARGRVLDR 220 (533)
Q Consensus 156 ~~~l~~--~l~~~g~~~~~~~G~~------~~vgvgG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~~~~~ 220 (533)
+.++.+ .+.++-..+.-..... +..+|||++..+. ..+|.+. .+++..++|+ .+.
T Consensus 78 ~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v 147 (288)
T 1n62_C 78 QHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIV 147 (288)
T ss_dssp HHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEE
T ss_pred HHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEE
Confidence 999995 4443210111001111 2347899987652 2466654 6777788884 322
Q ss_pred cCCCcchHHHhhcCCCCceeEEEEEEEEEEe
Q 009485 221 AAMGEDLFWAIRGGGGASFGIILAWKVKLVP 251 (533)
Q Consensus 221 ~~~~~dl~~a~rg~~~g~~GiVt~~~l~~~~ 251 (533)
+. .|+|..++--.-..--|||++.+...+
T Consensus 148 ~~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 148 AA--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp EH--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 22 266666542111222599999986544
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.34 E-value=0.0001 Score=77.86 Aligned_cols=153 Identities=16% Similarity=0.123 Sum_probs=99.0
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCC---CCcEEEeCCCCEEEEcCCCcHHH
Q 009485 82 FIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLAR---LRSVNVDINQNTAWVQAGATVGE 158 (533)
Q Consensus 82 ~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~---~~~i~~d~~~~~v~v~aG~~~~~ 158 (533)
.++.|+|.+|+.++++.. . +..+.+||++..-.- ........++||+++ |+.|+.+ ++.+++|||+++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~-k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWV-TKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHH-HTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhh-hccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 468999999999988752 2 578899999975210 011113568999987 6777765 44799999999999
Q ss_pred HHHHHHHhCCc-e----eecCCCC--CCccccccccCCCCCCCccccCcccccee----eeEEEccCCceecccCCCcch
Q 009485 159 LYYRIYEKSNI-H----GFPAGLC--TSLGIGGHITGGAYGSMMRKYGIGADNVL----DARIVDARGRVLDRAAMGEDL 227 (533)
Q Consensus 159 l~~~l~~~g~~-~----~~~~G~~--~~vgvgG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G~~~~~~~~~~dl 227 (533)
|.+.+. +.+. + ....+.. +..+|||++..+.. .+....-++ .+++..++|+ .+.+. .|+
T Consensus 252 l~~~l~-~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~vp~--~dF 321 (462)
T 2w3s_A 252 LRAFAE-GPHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RRMPL--EDF 321 (462)
T ss_dssp HHHHHT-TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CCCBG--GGG
T ss_pred HHHHHH-HHhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EEEEH--HHh
Confidence 998743 3331 1 1112211 34578999977653 244555666 7888888883 33332 478
Q ss_pred HHHhhcCCCCceeEEEEEEEEEEe
Q 009485 228 FWAIRGGGGASFGIILAWKVKLVP 251 (533)
Q Consensus 228 ~~a~rg~~~g~~GiVt~~~l~~~~ 251 (533)
|..+|-.....--|||+++|...+
T Consensus 322 ~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 322 FLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EEETTEESCCTTCEEEEEEEESCC
T ss_pred hcccccccCCCCcEEEEEEEecCC
Confidence 887763211222599999986544
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.51 E-value=0.0038 Score=62.24 Aligned_cols=153 Identities=12% Similarity=0.002 Sum_probs=89.8
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CcEEEeCCCCEEEEcCCCc
Q 009485 79 KPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARL---RSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~---~~i~~d~~~~~v~v~aG~~ 155 (533)
.+...+.|+|.+|+.++++. +. ...+.+||++....-. .+......+||++++ +.|+. +++.+++||+++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k-~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 81 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMK-FKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 81 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHH-HSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHh-cCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCc
Confidence 45678999999999987743 22 3578899999642100 001124589999875 55554 456899999999
Q ss_pred HHHHHHHHHHh----------CC-cee----ecCC--CCCCccccccccCCCCCCCccccCccccce---e----eeEEE
Q 009485 156 VGELYYRIYEK----------SN-IHG----FPAG--LCTSLGIGGHITGGAYGSMMRKYGIGADNV---L----DARIV 211 (533)
Q Consensus 156 ~~~l~~~l~~~----------g~-~~~----~~~G--~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v---~----~~~vV 211 (533)
+.++.+.+.++ .+ .+. ...+ .-+..+|||++..+.. .+|.. + .+++.
T Consensus 82 ~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p---------~sD~~~~L~AldA~v~l~ 152 (305)
T 3nvz_B 82 LSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP---------ISDLNPVFMASGTKLTIV 152 (305)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT---------TCSSHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC---------chHHHHHHHHcCCEEEEE
Confidence 99999876532 00 000 0011 1135578999866532 24432 2 56777
Q ss_pred ccCCceecccCCCcchHHHhhcCCCCceeEEEEEEEEE
Q 009485 212 DARGRVLDRAAMGEDLFWAIRGGGGASFGIILAWKVKL 249 (533)
Q Consensus 212 ~~~G~~~~~~~~~~dl~~a~rg~~~g~~GiVt~~~l~~ 249 (533)
.++|+....- ..|+|-+++--....--|||++.+..
T Consensus 153 ~~~G~R~vp~--~~df~~g~~~t~l~~~Eil~~I~iP~ 188 (305)
T 3nvz_B 153 SRGTRRTVPM--DHTFFPSYRKTLLGPEEILLSIEIPY 188 (305)
T ss_dssp ETTEEEEEEC--CGGGCCSTTCCSCCTTCEEEEEEEEC
T ss_pred cCCCcEEEEe--ehHhhcCcccccCCCCcEEEEEEecC
Confidence 7888532211 12566555411111124999998854
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.36 E-value=0.004 Score=61.54 Aligned_cols=151 Identities=15% Similarity=0.055 Sum_probs=90.0
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CcEEEeCCCCEEEEcCCCc
Q 009485 79 KPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARL---RSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~---~~i~~d~~~~~v~v~aG~~ 155 (533)
.|.-++.|+|.+|+.++++- +-...+.+||++..-.- .........+||++++ +.|+. +++.+++||+++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~-k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLL-AFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVT 76 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHH-HTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCB
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHH-hcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCc
Confidence 45568999999999998863 23467789999953110 0000113589999875 55655 456899999999
Q ss_pred HHHHHH--HHHHhCCceeec---CCC---CCCccccccccCCCCCCCccccCcccccee-------eeEEEccCCceecc
Q 009485 156 VGELYY--RIYEKSNIHGFP---AGL---CTSLGIGGHITGGAYGSMMRKYGIGADNVL-------DARIVDARGRVLDR 220 (533)
Q Consensus 156 ~~~l~~--~l~~~g~~~~~~---~G~---~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~~~~~ 220 (533)
+.++.+ .+.++-..+.-. .|+ -+..++||++..+- ..+|... .+++..++|+.. .
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~-v 146 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRS-V 146 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEE-E
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEE-E
Confidence 999986 343321111000 111 13456899986441 2467665 777777888532 2
Q ss_pred cCCCcchHHHhhc-CCCCceeEEEEEEEEE
Q 009485 221 AAMGEDLFWAIRG-GGGASFGIILAWKVKL 249 (533)
Q Consensus 221 ~~~~~dl~~a~rg-~~~g~~GiVt~~~l~~ 249 (533)
+- .|+|..++- .. ..--|||++.+..
T Consensus 147 p~--~dF~~g~~~t~L-~~~Eil~~I~iP~ 173 (288)
T 1t3q_C 147 SA--TDFMKGHYFTDL-EAGEVLVRVEIPI 173 (288)
T ss_dssp EH--HHHEEETTEESC-CTTCEEEEEEEEC
T ss_pred EH--HHHhcCcccccC-CCCCEEEEEEecC
Confidence 21 255544431 11 1225899998854
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=92.93 E-value=0.18 Score=49.84 Aligned_cols=76 Identities=20% Similarity=0.211 Sum_probs=52.5
Q ss_pred ccEEEecCCHHHHHHHHHHHHhcCC-eEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CcEEEeCCCCEEEEcCCCc
Q 009485 80 PEFIFTPLYESHVQAAVICSKRLGI-HLRVRSGGHDYEGLSYASEIETPFIVVDLARL---RSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 80 p~~vv~p~s~~dv~~~v~~a~~~~~-~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~---~~i~~d~~~~~v~v~aG~~ 155 (533)
|--.+.|+|.+|+.++++ +++- ...+.+||++....- .........+||++++ +.|+. +++.+++||+++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~-k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEI-NDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALST 76 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHH-HTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCB
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHh-hcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCc
Confidence 456799999999888764 3332 467889999964210 0000124589999886 44554 567899999999
Q ss_pred HHHHHH
Q 009485 156 VGELYY 161 (533)
Q Consensus 156 ~~~l~~ 161 (533)
+.++.+
T Consensus 77 ~~~l~~ 82 (296)
T 3hrd_C 77 FTQIEN 82 (296)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=89.48 E-value=0.53 Score=46.96 Aligned_cols=77 Identities=16% Similarity=0.104 Sum_probs=53.0
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CcEEEeCCCCEEEEcCCCc
Q 009485 79 KPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARL---RSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~---~~i~~d~~~~~v~v~aG~~ 155 (533)
.|--.+.|+|.+|+.++++ + -.-.+.+||+++...- .........+||++++ +.|+.++ ++.+++||+++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~-k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt 77 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNL-RRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGAT 77 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHH-HTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHH-hccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCc
Confidence 4446899999999999876 2 2477889999863110 0000124589999875 5666542 34799999999
Q ss_pred HHHHHHH
Q 009485 156 VGELYYR 162 (533)
Q Consensus 156 ~~~l~~~ 162 (533)
+.++.+.
T Consensus 78 ~~~l~~~ 84 (324)
T 1rm6_B 78 LEAIAEH 84 (324)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999864
No 36
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=86.98 E-value=0.96 Score=49.70 Aligned_cols=28 Identities=36% Similarity=0.507 Sum_probs=24.4
Q ss_pred hhhhhhccc-cHHHHHHhhhccCCCCccc
Q 009485 496 IWGVKYFKN-NFYRLVRVKTKVDPGNFFR 523 (533)
Q Consensus 496 ~~~~~yyG~-n~~RL~~IK~kyDP~nvF~ 523 (533)
.|...+||+ .++.+++||+.+||+|+|+
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILN 653 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFG 653 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 577777875 7999999999999999996
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=72.93 E-value=4.3 Score=48.12 Aligned_cols=79 Identities=5% Similarity=-0.097 Sum_probs=53.5
Q ss_pred CccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CcEEEeCCCCEEEEcCCCc
Q 009485 79 KPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARL---RSVNVDINQNTAWVQAGAT 155 (533)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~---~~i~~d~~~~~v~v~aG~~ 155 (533)
.+...++|+|.+|+.++++. + -.-.+.+||++..-.-. ........+||++++ +.|+. ++..+++||+++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k-~~~~~~~~lIdl~~i~EL~~I~~--~~~~l~IGA~vt 304 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMK-FKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 304 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHH-HSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhh-cCCCCCCeEEEcCCCHHhCceEE--eCCEEEEEecCh
Confidence 34568999999999887653 2 12467789988531100 000123589999875 45555 456799999999
Q ss_pred HHHHHHHHH
Q 009485 156 VGELYYRIY 164 (533)
Q Consensus 156 ~~~l~~~l~ 164 (533)
+.+|.+.+.
T Consensus 305 l~~l~~~l~ 313 (1332)
T 3unc_A 305 LSSVEKTLL 313 (1332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988664
No 38
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=57.93 E-value=13 Score=39.81 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=19.1
Q ss_pred ccHHHHHHhhhccCCCCccccCC
Q 009485 504 NNFYRLVRVKTKVDPGNFFRHEQ 526 (533)
Q Consensus 504 ~n~~RL~~IK~kyDP~nvF~~~q 526 (533)
..++-+++||+.+||+|+|+--.
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk 545 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGK 545 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTG
T ss_pred HHHHHHHHHHHHcCccCCCCCCc
Confidence 36888899999999999997443
No 39
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=46.87 E-value=6 Score=42.42 Aligned_cols=23 Identities=17% Similarity=0.268 Sum_probs=21.0
Q ss_pred ccHHHHHHhhhccCCCCccccCC
Q 009485 504 NNFYRLVRVKTKVDPGNFFRHEQ 526 (533)
Q Consensus 504 ~n~~RL~~IK~kyDP~nvF~~~q 526 (533)
.++++.+++|+++||+++|.++.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999999998753
No 40
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=45.10 E-value=20 Score=29.84 Aligned_cols=42 Identities=10% Similarity=0.230 Sum_probs=35.1
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCcC
Q 009485 71 RYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHL-RVRSGGHD 114 (533)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (533)
+|.. ...|..|+++.+++|+.++.+.|.+.|++. .++=.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4754 468999999999999999999999999986 56666664
No 41
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=43.56 E-value=23 Score=38.01 Aligned_cols=28 Identities=18% Similarity=0.364 Sum_probs=18.3
Q ss_pred hhhhhhccc-cHHHHHHhhhccCCCCccc
Q 009485 496 IWGVKYFKN-NFYRLVRVKTKVDPGNFFR 523 (533)
Q Consensus 496 ~~~~~yyG~-n~~RL~~IK~kyDP~nvF~ 523 (533)
.|....+|+ .++=+++||+.+||+|+|+
T Consensus 551 ~~l~~~~g~~~~~lmr~iK~a~DP~gIlN 579 (584)
T 2uuu_A 551 PWMTRYATRGWINVYRSLKETIDPKDICN 579 (584)
T ss_dssp --------CTHHHHHHHHHHHHCTTCCBS
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCCCcCCC
Confidence 466666775 6899999999999999996
No 42
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=41.08 E-value=30 Score=29.01 Aligned_cols=42 Identities=12% Similarity=0.172 Sum_probs=34.6
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCcC
Q 009485 71 RYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHL-RVRSGGHD 114 (533)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (533)
+|.. ...+..|+++.+++|+.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 4743 348999999999999999999999999986 55666765
No 43
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=39.36 E-value=47 Score=27.67 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=34.7
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCcC
Q 009485 71 RYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHL-RVRSGGHD 114 (533)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (533)
+|.. ...|..|+++.+++|+.++.+.|.+.|+|. .++-.|+.
T Consensus 49 ~W~~--~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 49 AWFR--EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4653 468999999999999999999999999986 56666664
No 44
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=39.23 E-value=14 Score=39.60 Aligned_cols=28 Identities=18% Similarity=0.163 Sum_probs=21.0
Q ss_pred ccccHHHHHHhhhccCCCCccccCCCCCC
Q 009485 502 FKNNFYRLVRVKTKVDPGNFFRHEQSIPT 530 (533)
Q Consensus 502 yG~n~~RL~~IK~kyDP~nvF~~~qsI~~ 530 (533)
|++... |++||+.+||.|+|+--.-+.+
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 444444 9999999999999975554443
No 45
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=38.43 E-value=46 Score=27.41 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=33.1
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCcC
Q 009485 71 RYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHL-RVRSGGHD 114 (533)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (533)
+|. ....|..|+++.+++|+.++.+.|.+.|+|. .++-.|+.
T Consensus 43 ~W~--~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 43 EWL--REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 465 3568999999999999999999999999986 45555553
No 46
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=37.82 E-value=10 Score=40.29 Aligned_cols=23 Identities=17% Similarity=0.199 Sum_probs=21.1
Q ss_pred cccHHHHHHhhhccCCCCccccC
Q 009485 503 KNNFYRLVRVKTKVDPGNFFRHE 525 (533)
Q Consensus 503 G~n~~RL~~IK~kyDP~nvF~~~ 525 (533)
|++++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 47
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=37.10 E-value=48 Score=27.37 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=34.6
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCcC
Q 009485 71 RYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHL-RVRSGGHD 114 (533)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (533)
+|. ....|..|+++.+++++.++.+.|.+.|+|. .++-.|+.
T Consensus 45 ~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 45 EWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 465 3568999999999999999999999999986 55556654
No 48
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=36.59 E-value=24 Score=41.91 Aligned_cols=79 Identities=11% Similarity=0.035 Sum_probs=49.3
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEEEcCCCcHHHHH
Q 009485 82 FIFTPLYESHVQAAVICSKRLGIHLRVRSGGHDYEGLSYASEIETPFIVVDLARLRSV-NVDINQNTAWVQAGATVGELY 160 (533)
Q Consensus 82 ~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~g~~~gvvIdl~~~~~i-~~d~~~~~v~v~aG~~~~~l~ 160 (533)
..+.|.|.+|+.++..- .-+-++ ..|++... .-.........++|++.+.... .+..++..+++||++++.++.
T Consensus 242 ~w~~P~tl~el~~l~~~--~p~a~l--vaGnT~~g-l~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMK--HPSAPL--VIGNTYLG-LHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp EEEECSSHHHHHHHHHH--CTTSCB--CSSCTTHH-HHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred eEecCCCHHHHHHHHHH--CCCCeE--EEecccce-eeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 47899999999887542 223343 44665531 0000000113588998875443 344566789999999999998
Q ss_pred HHHHH
Q 009485 161 YRIYE 165 (533)
Q Consensus 161 ~~l~~ 165 (533)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 49
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=30.92 E-value=85 Score=25.85 Aligned_cols=41 Identities=17% Similarity=0.333 Sum_probs=33.6
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCc
Q 009485 71 RYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHL-RVRSGGH 113 (533)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh 113 (533)
+|.. ...|..|++..+++++.++.+.|.+.|++. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4754 457999999999999999999999999985 5555665
No 50
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=21.58 E-value=1.5e+02 Score=26.72 Aligned_cols=53 Identities=11% Similarity=-0.031 Sum_probs=39.8
Q ss_pred CCCCChHHHHhhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCc
Q 009485 54 PNTRSFSSILQSSAQNLRYLQPSVPKPEFIFTPLYESHVQAAVICSKRLGIHLRVRSGGH 113 (533)
Q Consensus 54 p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh 113 (533)
...|++++....+. .++ . -.+..++.|+|.+|+.+++++..+.. |+...+-|.
T Consensus 101 ~~tp~~~~l~~~~~--~~~---g-DivKia~~a~~~~D~l~ll~~~~~~~-p~I~~~MG~ 153 (196)
T 2ox1_A 101 IRTPDYSELKGIVE--GRR---G-DLVKIATMGKSKRDVETIVRILTNYD-DVVAFLMGE 153 (196)
T ss_dssp SCCCCHHHHHHHHH--TCC---S-SEEEEEEECCSHHHHHHHHHHHHHCS-SEEEEEESG
T ss_pred CCCcCHHHHHHHHH--HHc---C-CEEEEEEcCCCHHHHHHHHHHHhhCC-CeEEEEcCC
Confidence 46788888765332 222 2 48899999999999999999988876 877777664
No 51
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=20.00 E-value=66 Score=32.21 Aligned_cols=29 Identities=24% Similarity=0.140 Sum_probs=23.8
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEE--eCCcC
Q 009485 86 PLYESHVQAAVICSKRLGIHLRVR--SGGHD 114 (533)
Q Consensus 86 p~s~~dv~~~v~~a~~~~~~~~~~--ggGh~ 114 (533)
.-|.+|+.++|++|++++|.|.+- .=||.
T Consensus 91 ~YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 91 FLSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp EBCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 359999999999999999999864 34665
Done!