BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009492
(533 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 217/482 (45%), Gaps = 42/482 (8%)
Query: 35 SRKANATLPPGPRGLPVFGYLPFLGTT-DLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
++K A P LP+ G LPFL +H F +L YGPI+ + +G K V+V
Sbjct: 2 AKKTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHH 61
Query: 94 SLIRQVVRDQDTTFANRDPPKAAL-VVSYGGNDIAWSNYGPEWRKLRKFFVGKMM----N 148
L ++V+ + F+ R P A L + S IA+++ G W+ R+ +
Sbjct: 62 QLAKEVLIKKGKDFSGR-PQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDG 120
Query: 149 NESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKE 208
++ L+ QE+ +T+ D+ N G+ IDI F + I + + + +
Sbjct: 121 DQKLEKIIC---QEI-STLCDMLATHN--GQSIDISFPVFVAVTNVISLICFNTSYK--- 171
Query: 209 KGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTV 268
G L + + L+ ++ D+ P L + +E+ + + ++++N +
Sbjct: 172 NGDPELNVIQNYNEGIIDNLSKD-SLVDLVPWLKIFPNKTLEKLKSHVKI-RNDLLNKIL 229
Query: 269 EQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASS--------ISMNQFKA 320
E ++ K F N N D+ ++ +S N
Sbjct: 230 ENYKEK-------------FRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILT 276
Query: 321 VLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLD 380
+ +V+WT+A L+ +PQV KK+ EE+ Q VG +RL+ L+
Sbjct: 277 TIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLE 336
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
A ++E RL P P+L+P +A+ S+IG + + K T +++N+ A+H + K W P QF P
Sbjct: 337 ATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMP 396
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGT 500
ERFL+ S YLPFG+G R C G LA + L ++A LL F+ E+P
Sbjct: 397 ERFLNPAGTQLISPS---VSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDG 453
Query: 501 KL 502
+L
Sbjct: 454 QL 455
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 209/470 (44%), Gaps = 43/470 (9%)
Query: 33 KKSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSS 92
KK+ LPPGP LPV G + +G D+ K T LS VYGP+F L+ G K VV+
Sbjct: 3 KKTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHG 62
Query: 93 PSLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESL 152
+++ + D F+ R A + G I +SN G +W+++R+F + + N
Sbjct: 63 YEAVKEALIDLGEEFSGRGIFPLAERANRGFG-IVFSN-GKKWKEIRRFSLMTLRNFGMG 120
Query: 153 DACYALRKQE-VKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGT 211
R QE + + +L P I + ++C+I ++ + + K++
Sbjct: 121 KRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI---IFHKRFDYKDQQF 177
Query: 212 TNLRAGLKFKLAELMVLAGTP--NISDVF-PMLSWLDIQGIERRAKKISLWLDNVINSTV 268
NL KL E + + +P I + F P++ + G + K ++ + I V
Sbjct: 178 LNLME----KLNENIKILSSPWIQICNNFSPIIDYF--PGTHNKLLKNVAFMKSYILEKV 231
Query: 269 EQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXX 328
++H +E N F N S +I + AV
Sbjct: 232 KEH---------QESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAV--DLFGA 280
Query: 329 XXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMD--SCVEEFHLSRLMYLDAVVKET 386
+ + + L++HP+V KVQEE+ +V+G + C+++ S + Y DAVV E
Sbjct: 281 GTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQD--RSHMPYTDAVVHEV 338
Query: 387 FRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDD 446
R +P LP + Y IPK TTI++++ ++ D K + NP F P FLD+
Sbjct: 339 QRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE 398
Query: 447 GIASKFDYSGNNFQ----YLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
G NF+ ++PF +G+R+C G ALA L L S+L +F
Sbjct: 399 ---------GGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNF 439
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 213/483 (44%), Gaps = 36/483 (7%)
Query: 43 PPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRD 102
PP P G P+ G++ LG H + +S YG + ++ +G+ +V+S IRQ +
Sbjct: 18 PPEPWGWPLLGHVLTLGKNP-HLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR 76
Query: 103 QDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKM------MNNESLDACY 156
Q F R + +++ G + ++ GP W R+ + + S +CY
Sbjct: 77 QGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCY 136
Query: 157 ALRKQEVKNTIRDLYNNDNKI-GKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNLR 215
++ V + L + ++ P ++ +V ++ N++ +++
Sbjct: 137 L--EEHVSKEAKALISRLQELMAGPGHFD--PYNQVVVSVANVIGAMCFGQHFPESSDEM 192
Query: 216 AGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIER--RAKKISLWLDNVINSTVEQHRN 273
L E + A + N D FP+L +L ++R + LW + TV++H
Sbjct: 193 LSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWF---LQKTVQEHY- 248
Query: 274 KELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAV--LAXXXXXXXX 331
++F+ + ++ AS + Q K V +
Sbjct: 249 ------------QDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFD 296
Query: 332 XXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHP 391
+ W++ L+ P++ +K+Q+EL V+G + +L YL+A + ETFR
Sbjct: 297 TVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSS 356
Query: 392 AVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLD-DGIAS 450
+P +P + + + G+ IPK + +N ++ DP+LW++P +FRPERFL DG A
Sbjct: 357 FLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAI 416
Query: 451 KFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGI 510
S + + FG G+R C G LA+ + LA LL E+ +P G K++L+ +G+
Sbjct: 417 NKPLSE---KMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGL 473
Query: 511 VIK 513
+K
Sbjct: 474 TMK 476
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 210/469 (44%), Gaps = 40/469 (8%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP P+ G + + D+ K T+ S YGP+F ++LG K VV+
Sbjct: 3 KKTSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGY 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+++ + D FA R VS G IA+SN W+++R+F + + N
Sbjct: 63 EAVKEALVDLGEEFAGRGSVPILEKVSKGLG-IAFSN-AKTWKEMRRFSLMTLRNFGMGK 120
Query: 154 ACYALR-KQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTT 212
R ++E + + +L + P I + ++C++ ++ + K++
Sbjct: 121 RSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSV---IFHNRFDYKDEEFL 177
Query: 213 NLRAGLKFKLAELMVLAGTP--NISDVFPMLSWLD-IQGIERRAKKISLWLDNVINSTVE 269
L L E + L GTP + + FP L LD GI + K + ++ N I V+
Sbjct: 178 KLMESLH----ENVELLGTPWLQVYNNFPAL--LDYFPGIHKTLLKNADYIKNFIMEKVK 231
Query: 270 QHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXX 329
+H+ K + + ++F +++ ++ ++
Sbjct: 232 EHQ-------------KLLDVNNPRDFIDCFLIKMEQENNLE-FTLESLVIAVSDLFGAG 277
Query: 330 XXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGM--DSCVEEFHLSRLMYLDAVVKETF 387
+ +++ L++HP+V +VQEE+ +V+G C+++ SR+ Y DAV+ E
Sbjct: 278 TETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQD--RSRMPYTDAVIHEIQ 335
Query: 388 RLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDD- 446
R +P LP + Y IPK T I+ ++ ++ D K + NP F P FLD+
Sbjct: 336 RFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDES 395
Query: 447 GIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWE 495
G K DY ++PF +G+RMC G LA L L S+L +F+ +
Sbjct: 396 GNFKKSDY------FMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 205/460 (44%), Gaps = 43/460 (9%)
Query: 43 PPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRD 102
PPGP LPV G + +G D+ K T LS VYGP+F L+ G K VV+ +++ + D
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 103 QDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQE 162
F+ R A + G I +SN G +W+++R+F + + N R QE
Sbjct: 71 LGEEFSGRGIFPLAERANRGFG-IVFSN-GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 128
Query: 163 -VKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNLRAGLKFK 221
+ + +L P I + ++C+I ++ + + K++ NL K
Sbjct: 129 EARCLVEELRKTKASPCDPTFILGCAPCNVICSI---IFHKRFDYKDQQFLNLME----K 181
Query: 222 LAELMVLAGTP--NISDVFPMLSWLD-IQGIERRAKKISLWLDNVINSTVEQHRNKELTV 278
L E + + +P + + FP L LD G + K ++ + I V++H
Sbjct: 182 LNENIEILSSPWIQVYNNFPAL--LDYFPGTHNKLLKNVAFMKSYILEKVKEH------- 232
Query: 279 EGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXXXXXXXXMVE 338
+E N F N S +I + AV +
Sbjct: 233 --QESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAV--DLFGAGTETTSTTLR 288
Query: 339 WTMAELMQHPQVMKKVQEELAQVVGMD--SCVEEFHLSRLMYLDAVVKETFRLHPAVPLL 396
+ + L++HP+V KVQEE+ +V+G + C+++ S + Y DAVV E R +P
Sbjct: 289 YALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQD--RSHMPYTDAVVHEVQRYIDLLPTS 346
Query: 397 LPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSG 456
LP + Y IPK TTI++++ ++ D K + NP F P FLD+ G
Sbjct: 347 LPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE---------G 397
Query: 457 NNFQ----YLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
NF+ ++PF +G+R+C G ALA L L S+L +F
Sbjct: 398 GNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNF 437
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 196/468 (41%), Gaps = 41/468 (8%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LP+ G + + D+ K FT S VYGP+F ++ G VV
Sbjct: 3 KKTSSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGY 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+++ + D F+ R + ++ G I S+ G W+++R+F + + N
Sbjct: 63 EAVKEALIDNGEEFSGRGNSPISQRITKGLGII--SSNGKRWKEIRRFSLTTLRNFGMGK 120
Query: 154 ACYALRKQEVKNT-IRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTT 212
R QE + + +L P I + ++C++ ++ + + K++
Sbjct: 121 RSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSV---VFQKRFDYKDQNFL 177
Query: 213 NL--RAGLKFKLAE---LMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINST 267
L R F++ + V P + D FP G + K + I
Sbjct: 178 TLMKRFNENFRILNSPWIQVCNNFPLLIDCFP--------GTHNKVLKNVALTRSYIREK 229
Query: 268 VEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXX 327
V++H+ A + R+ D+ S ++ +A
Sbjct: 230 VKEHQ-----------ASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFV 278
Query: 328 XXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGM--DSCVEEFHLSRLMYLDAVVKE 385
+ + + L++HP+V KVQEE+ V+G C+++ S + Y DAVV E
Sbjct: 279 AGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQD--RSHMPYTDAVVHE 336
Query: 386 TFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLD 445
R VP +P + + Y IPK TTIM + ++ D K + NP F P FLD
Sbjct: 337 IQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLD 396
Query: 446 -DGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+G K DY ++PF +G+R+CAG LA L L ++L +F
Sbjct: 397 KNGNFKKSDY------FMPFSAGKRICAGEGLARMELFLFLTTILQNF 438
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 206/466 (44%), Gaps = 35/466 (7%)
Query: 33 KKSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSS 92
KK+ LPPGP LPV G + + D+ K T LS +YGP+F L+ G + VV+
Sbjct: 3 KKTSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHG 62
Query: 93 PSLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESL 152
++++ + D F+ R A + G I +SN G W+++R+F + + N
Sbjct: 63 YEVVKEALIDLGEEFSGRGHFPLAERANRGFG-IVFSN-GKRWKEIRRFSLMTLRNFGMG 120
Query: 153 DACYALR-KQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGT 211
R ++E + + +L P I + ++C+I ++ + + K++
Sbjct: 121 KRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI---IFQKRFDYKDQQF 177
Query: 212 TNLRAGLKFKLAELMVLAGTP--NISDVFPMLSWLD-IQGIERRAKKISLWLDNVINSTV 268
NL KL E + + TP I + FP + +D G + K ++++ I V
Sbjct: 178 LNLME----KLNENIRIVSTPWIQICNNFPTI--IDYFPGTHNKLLKNLAFMESDILEKV 231
Query: 269 EQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXX 328
++H+ + R+ + S ++ A
Sbjct: 232 KEHQE-----------SMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGA 280
Query: 329 XXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDS--CVEEFHLSRLMYLDAVVKET 386
+ + + L++HP+V KVQEE+ +VVG + C+++ + Y DAVV E
Sbjct: 281 GTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQD--RGHMPYTDAVVHEV 338
Query: 387 FRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDD 446
R +P LP + Y IPK TTI+ ++ ++ D K + NP F P FLD+
Sbjct: 339 QRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDE 398
Query: 447 GIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
G ++ +N+ ++PF +G+R+C G LA L L +L +F
Sbjct: 399 G----GNFKKSNY-FMPFSAGKRICVGEGLARMELFLFLTFILQNF 439
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 217/500 (43%), Gaps = 49/500 (9%)
Query: 33 KKSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSS 92
KK+ PPGP G P+ G++ LG H + +S YG + ++ +G+ VV+S
Sbjct: 3 KKTSSKGLKNPPGPWGWPLIGHMLTLGKNP-HLALSRMSQQYGDVLQIRIGSTPVVVLSG 61
Query: 93 PSLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWS-NYGPEWRKLRKFFVGKMM---- 147
IRQ + Q F R P + G +++S + GP W R+ +
Sbjct: 62 LDTIRQALVRQGDDFKGR-PDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSI 120
Query: 148 --NNESLDACY-----ALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLW 200
+ S +CY + + + +T+++L P +S + ++CAI +
Sbjct: 121 ASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHF-NPYRYVVVSVTNVICAI---CF 176
Query: 201 GEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWL---DIQGIERRAKKIS 257
G + + +L + G+ N +D P+L +L + + +K
Sbjct: 177 GRRYDHNHQELLSLVN----LNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFY 232
Query: 258 LWLDNVINS---TVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSIS 314
++ ++ T E+ +++T E + + N N +D+ +I
Sbjct: 233 SFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEK-QLDENAN-------VQLSDEKIINIV 284
Query: 315 MNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLS 374
++ F A + W++ L+ +P+V +K+QEEL V+G S
Sbjct: 285 LDLFGAGFDTVTTA--------ISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRS 336
Query: 375 RLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDN 434
L Y++A + ETFR VP +P + +++ G+ IPK + +N I+ D KLW N
Sbjct: 337 HLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVN 396
Query: 435 PLQFRPERFLD-DGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFE 493
P +F PERFL DG K + + FG G+R C G +A + LA LL E
Sbjct: 397 PSEFLPERFLTPDGAIDKVLSE----KVIIFGMGKRKCIGETIARWEVFLFLAILLQRVE 452
Query: 494 WELPTGTKLNLSEKFGIVIK 513
+ +P G K++++ +G+ +K
Sbjct: 453 FSVPLGVKVDMTPIYGLTMK 472
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 198/473 (41%), Gaps = 41/473 (8%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LPV G L + L + F L YG +F ++LG++ VV+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVS-YGGNDIAWSNYGPEWRKLRKFFVGKM----MN 148
IR+ + DQ F+ R K A+V + G + ++N G WR LR+F + M M
Sbjct: 63 DAIREALVDQAEAFSGRG--KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMG 119
Query: 149 NESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKE 208
S++ ++E + + +L + + + S ++C+I ++G+ + K+
Sbjct: 120 KRSVEERI---QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI---VFGKRFDYKD 173
Query: 209 KGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINS 266
L L + S VF + S G R+ + ++ I
Sbjct: 174 PVFLRL-----LDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQ 228
Query: 267 TVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXX 326
+VE+HR + S ++F D S S + +L
Sbjct: 229 SVEKHR-------------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS 275
Query: 327 X--XXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVK 384
+ + ++++P V ++VQ+E+ QV+G +++ Y DAV+
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 385 ETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFL 444
E RL +P +P ++ + GY IPK+T + + + DP+ ++ P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 445 DDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELP 497
D A K N ++PF G+R+CAG +A L ++L +F P
Sbjct: 396 DANGALK-----RNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 197/473 (41%), Gaps = 41/473 (8%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LPV G L + L + F L YG +F ++LG++ VV+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVS-YGGNDIAWSNYGPEWRKLRKFFVGKM----MN 148
IR+ + DQ F+ R K A+V + G + ++N G WR LR+F + M M
Sbjct: 63 DAIREALVDQAEAFSGRG--KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMG 119
Query: 149 NESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKE 208
S++ ++E + + +L + + + S ++C+I ++G+ + K+
Sbjct: 120 KRSVEERI---QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI---VFGKRFDYKD 173
Query: 209 KGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINS 266
L L + S VF + S G R+ + ++ I
Sbjct: 174 PVFLRL-----LDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQ 228
Query: 267 TVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXX 326
+VE+HR + S ++F D S S + +L
Sbjct: 229 SVEKHR-------------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS 275
Query: 327 X--XXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVK 384
+ + ++++P V ++VQ+E+ QV+G +++ Y DAV+
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 385 ETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFL 444
E RL +P +P ++ + GY IPK+T + + + DP+ ++ P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 445 DDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELP 497
D A K N ++PF G+R+C G +A L ++L +F P
Sbjct: 396 DANGALK-----RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 197/473 (41%), Gaps = 41/473 (8%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LPV G L + L + F L YG +F ++LG++ VV+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVS-YGGNDIAWSNYGPEWRKLRKFFVGKM----MN 148
IR+ + DQ F+ R K A+V + G + ++N G WR LR+F + M M
Sbjct: 63 DAIREALVDQAEAFSGRG--KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMG 119
Query: 149 NESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKE 208
S++ ++E + + +L + + + S ++C+I ++G+ + K+
Sbjct: 120 KRSVEERI---QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI---VFGKRFDYKD 173
Query: 209 KGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINS 266
L L + S VF + S G R+ + ++ I
Sbjct: 174 PVFLRL-----LDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQ 228
Query: 267 TVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXX 326
+VE+HR + S ++F D S S + +L
Sbjct: 229 SVEKHR-------------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS 275
Query: 327 --XXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVK 384
+ + ++++P V ++VQ+E+ QV+G +++ Y DAV+
Sbjct: 276 LFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 385 ETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFL 444
E RL +P +P ++ + GY IPK+T + + + DP+ ++ P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 445 DDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELP 497
D A K N ++PF G+R+C G +A L ++L +F P
Sbjct: 396 DANGALK-----RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 197/473 (41%), Gaps = 41/473 (8%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LPV G L + L + F L YG +F ++LG++ VV+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVS-YGGNDIAWSNYGPEWRKLRKFFVGKM----MN 148
IR+ + DQ F+ R K A+V + G + ++N G WR LR+F + M M
Sbjct: 63 DAIREALVDQAEAFSGRG--KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMG 119
Query: 149 NESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKE 208
S++ ++E + + +L + + + S ++C+I ++G+ + K+
Sbjct: 120 KRSVEERI---QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI---VFGKRFDYKD 173
Query: 209 KGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINS 266
L L + S VF + S G R+ + ++ I
Sbjct: 174 PVFLRL-----LDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQ 228
Query: 267 TVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXX 326
+VE+HR + S ++F D S S + +L
Sbjct: 229 SVEKHR-------------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS 275
Query: 327 X--XXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVK 384
+ + ++++P V ++VQ+E+ QV+G +++ Y DAV+
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 385 ETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFL 444
E RL +P +P ++ + GY IPK+T + + + DP+ ++ P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 445 DDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELP 497
D A K N ++PF G+R+C G +A L ++L +F P
Sbjct: 396 DANGALK-----RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 197/473 (41%), Gaps = 41/473 (8%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LPV G L + L + F L YG +F ++LG++ VV+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVS-YGGNDIAWSNYGPEWRKLRKFFVGKM----MN 148
IR+ + DQ F+ R K A+V + G + ++N G WR LR+F + M M
Sbjct: 63 DAIREALVDQAEAFSGRG--KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGMG 119
Query: 149 NESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKE 208
S++ ++E + + +L + + + S ++C+I ++G+ + K+
Sbjct: 120 KRSVEERI---QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI---VFGKRFDYKD 173
Query: 209 KGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINS 266
L L + S VF + S G R+ + ++ I
Sbjct: 174 PVFLRL-----LDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQ 228
Query: 267 TVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXX 326
+VE+HR + S ++F D S S + +L
Sbjct: 229 SVEKHR-------------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS 275
Query: 327 X--XXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVK 384
+ + ++++P V ++VQ+E+ QV+G +++ Y DAV+
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 385 ETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFL 444
E RL +P +P ++ + GY IPK+T + + + DP+ ++ P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 445 DDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELP 497
D A K N ++PF G+R+C G +A L ++L +F P
Sbjct: 396 DANGALK-----RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 202/463 (43%), Gaps = 50/463 (10%)
Query: 39 NATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQ 98
N LPP V G+L L +L L+ GP+++L LG + VV++S I +
Sbjct: 27 NLHLPPL-----VPGFLHLL-QPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEE 80
Query: 99 VVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMM--NNESLDACY 156
+ + FA R + +VS DI+ +Y W+ +K ++ S++
Sbjct: 81 AMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWV 140
Query: 157 ALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNLRA 216
QE +R + G P+ I + FS L C+I L K T + A
Sbjct: 141 DQLTQEFCERMR------VQAGAPVTIQK-EFSLLTCSIICYL-----TFGNKEDTLVHA 188
Query: 217 GLKFKLAELMVL--AGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNK 274
+ +LM + I D+ P L + G+ R + I D+++ + +H K
Sbjct: 189 -FHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIEN-RDHMVEKQLRRH--K 244
Query: 275 ELTVEGEERAGKNF--EGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXXXXX 332
E V G+ R ++ +G + ++ + +
Sbjct: 245 ESMVAGQWRDMTDYMLQGVGRQRV----------EEGPGQLLEGHVHMSVVDLFIGGTET 294
Query: 333 XXXMVEWTMAELMQHPQVMKKVQEELAQVVGMD-SC--VEEFHLSRLMYLDAVVKETFRL 389
+ W +A L+ HP++ +++QEEL + +G SC V +RL L+A + E RL
Sbjct: 295 TASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRL 354
Query: 390 HPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIA 449
P VPL LP R + S+I GY+IP+ ++ N++ H D +W+ P +FRP+RFL+
Sbjct: 355 RPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE---- 410
Query: 450 SKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
G N L FG G R+C G +LA L VLA LL +F
Sbjct: 411 -----PGANPSALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 201/496 (40%), Gaps = 55/496 (11%)
Query: 43 PPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRD 102
PPGP P+ G +G H F L+ YG +F++ LG+ VV++ I Q +
Sbjct: 11 PPGPFAWPLIGNAAAVGQA-AHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 103 QDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWR--------KLRKFFVGKMMNNESLDA 154
Q + FA+R P A+ V GG +A+ +Y W+ +R FF + + + L+
Sbjct: 70 QGSAFADR-PSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEG 128
Query: 155 CYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNL 214
+E + L + G +D L+ V A+ N++ +
Sbjct: 129 HVLSEARE----LVALLVRGSADGAFLDPRPLT----VVAVANVMSAVCFGCRYSHDDPE 180
Query: 215 RAGLKFKLAELMVLAGTPNISDVFPMLSWLD--IQGIERRAKKISLWLDNVINSTVEQHR 272
L E G ++ DV P L + ++ + R ++++ N I +H
Sbjct: 181 FRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHC 240
Query: 273 NK------------ELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKA 320
+ E++A + G + + + A
Sbjct: 241 ESLRPGAAPRDMMDAFILSAEKKAAGDSHGG------------------GARLDLENVPA 282
Query: 321 VLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLD 380
+ ++W + ++P V +VQ EL QVVG D L Y+
Sbjct: 283 TITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVL 342
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
A + E R VP+ +P + ++++ GY+IPKDT + +N +++ DP W NP F P
Sbjct: 343 AFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDP 402
Query: 441 ERFLD-DGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTG 499
RFLD DG+ +K D + + + F G+R C G L++ L ++ L H ++
Sbjct: 403 ARFLDKDGLINK-DLTS---RVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPN 458
Query: 500 TKLNLSEKFGIVIKKK 515
++ +G+ IK K
Sbjct: 459 EPAKMNFSYGLTIKPK 474
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 208/469 (44%), Gaps = 44/469 (9%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LP+ G L L ++ K FT L+ +GP+F L++G++ VV+
Sbjct: 3 KKTSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGY 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+++ + D F+ R A ++ I ++N GP W+ +R+F + + N
Sbjct: 63 KAVKEALLDYKDEFSGRGDLPA--FHAHRDRGIIFNN-GPTWKDIRRFSLTTLRN----- 114
Query: 154 ACYALRKQEVKNTIRD-----LYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKE 208
Y + KQ ++ I+ L G+P D L I ++L+ + + +
Sbjct: 115 --YGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYND 172
Query: 209 KGTTNLRAGLKFKLAELMVLAGTP--NISDVFP-MLSWLDIQGIERRAKKISLWLDNVIN 265
+ LR L + E L TP + + FP L +L G R+ K + ++
Sbjct: 173 EKF--LR--LMYLFNENFHLLSTPWLQLYNNFPSFLHYL--PGSHRKVIKNVAEVKEYVS 226
Query: 266 STVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASS--ISMNQFKAVLA 323
V++H ++ + + ++ + ++ +M+ +A
Sbjct: 227 ERVKEHH-------------QSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVA 273
Query: 324 XXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVV 383
+ + + LM++P++ +K+ EE+ +V+G + Y+DAVV
Sbjct: 274 DLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVV 333
Query: 384 KETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERF 443
E R VP LP A+ + GY IPK T ++ + ++ D + + +P +F+PE F
Sbjct: 334 HEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF 393
Query: 444 LDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
L++ KF YS + PF +G+R+CAG LA L +L ++L F
Sbjct: 394 LNEN--GKFKYSD---YFKPFSTGKRVCAGEGLARMELFLLLCAILQHF 437
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 204/474 (43%), Gaps = 35/474 (7%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LP G L T ++ ++S YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+++ + DQ F+ R +A + G +A+SN G ++LR+F + +
Sbjct: 63 DAVKEALVDQAEEFSGRGE-QATFDWLFKGYGVAFSN-GERAKQLRRFSIATLRGFGVGK 120
Query: 154 ACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTN 213
R QE + D + G ID T+ I ++++G+ + ++K +
Sbjct: 121 RGIEERIQEEAGFLIDALRGTH--GANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLS 178
Query: 214 LRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINSTVEQH 271
L L+ L A + ++ M S + + G +++A K L++ I VE H
Sbjct: 179 L---LRMMLGSFQFTATS--TGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVE-H 232
Query: 272 RNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSA---SSISMNQFKAVLAXXXXX 328
+ L + + ++F S F N ++ ++ M A
Sbjct: 233 NQRTL----DPNSPRDFIDS----FLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETV 284
Query: 329 XXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFR 388
+ + LM+HP+V KV EE+ +V+G + + +++ Y +AV+ E R
Sbjct: 285 STT-----LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQR 339
Query: 389 LHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLD-DG 447
+P+ L R ++ + + +PK T + + ++ RDP+ + NP F P+ FLD G
Sbjct: 340 FGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKG 399
Query: 448 IASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTK 501
K D ++PF G+R C G LA L +++ +F ++ P K
Sbjct: 400 QFKKSD------AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPK 447
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 201/465 (43%), Gaps = 35/465 (7%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LP G L T ++ ++S YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+R+ + DQ F+ R +A + G + +SN G ++LR+F + + +
Sbjct: 63 DAVREALVDQAEEFSGRGE-QATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 154 ACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTN 213
R QE + D G ID T+ I ++++G+ + K+K +
Sbjct: 121 RGIEERIQEEAGFLIDALRGTG--GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 214 LRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINSTVEQH 271
L L+ L + + ++ M S + + G +++A ++ L++ I VE H
Sbjct: 179 L---LRMMLGSFQFTSTS--TGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE-H 232
Query: 272 RNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSA---SSISMNQFKAVLAXXXXX 328
+ L + + ++F S F N ++ ++ M A
Sbjct: 233 NQRTL----DPNSPRDFIDS----FLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETV 284
Query: 329 XXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFR 388
+ + LM+HP+V KV EE+ +V+G + + +++ Y++AV+ E R
Sbjct: 285 STT-----LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 389 LHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDD-G 447
+P+ L RR + + + +PK T + + ++ RDP + NP F P+ FL++ G
Sbjct: 340 FGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 448 IASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
K D ++PF G+R C G LA L +++ +F
Sbjct: 400 QFKKSD------AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 202/465 (43%), Gaps = 35/465 (7%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LP G L T ++ ++S YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+R+ + DQ F+ R +A + G + +SN G ++LR+F + + +
Sbjct: 63 DAVREALVDQAEEFSGRGE-QATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 154 ACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTN 213
R QE + D G ID T+ I ++++G+ + K+K +
Sbjct: 121 RGIEERIQEEAGFLIDALRGTG--GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 214 LRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINSTVEQH 271
L L+ L + + ++ M S + + G +++A ++ L++ I VE H
Sbjct: 179 L---LRMMLGIFQFTSTS--TGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE-H 232
Query: 272 RNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSA---SSISMNQFKAVLAXXXXX 328
+ L + + ++F S F N ++ ++ M + +
Sbjct: 233 NQRTL----DPNSPRDFIDS----FLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETV 284
Query: 329 XXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFR 388
+ + LM+HP+V KV EE+ +V+G + + +++ Y++AV+ E R
Sbjct: 285 STT-----LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 389 LHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDD-G 447
+P+ L RR + + + +PK T + + ++ RDP + NP F P+ FL++ G
Sbjct: 340 FGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 448 IASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
K D ++PF G+R C G LA L +++ +F
Sbjct: 400 QFKKSD------AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 202/465 (43%), Gaps = 35/465 (7%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LP G L T ++ ++S YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+R+ + DQ F+ R +A + G + +SN G ++LR+F + + +
Sbjct: 63 DAVREALVDQAEEFSGRGE-QATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 154 ACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTN 213
R QE + D G ID T+ I ++++G+ + K+K +
Sbjct: 121 RGIEERIQEEAGFLIDALRGTG--GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 214 LRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINSTVEQH 271
L L+ L + + ++ M S + + G +++A ++ L++ I VE H
Sbjct: 179 L---LRMMLGIFQFTSTS--TGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE-H 232
Query: 272 RNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSA---SSISMNQFKAVLAXXXXX 328
+ L + + ++F S F N ++ ++ M + +
Sbjct: 233 NQRTL----DPNSPRDFIDS----FLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETV 284
Query: 329 XXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFR 388
+ + LM+HP+V KV EE+ +V+G + + +++ Y++AV+ E R
Sbjct: 285 STT-----LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 389 LHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDD-G 447
+P+ L RR + + + +PK T + + ++ RDP + NP F P+ FL++ G
Sbjct: 340 FGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 448 IASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
K D ++PF G+R C G LA L +++ +F
Sbjct: 400 QFKKSD------AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 198/462 (42%), Gaps = 29/462 (6%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LP G L T ++ ++S YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+R+ + DQ F+ R +A + G + +SN G ++LR+F + + +
Sbjct: 63 DAVREALVDQAEEFSGRGE-QATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 154 ACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTN 213
R QE + D G ID T+ I ++++G+ + K+K +
Sbjct: 121 RGIEERIQEEAGFLIDALRGTG--GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 214 LRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINSTVEQH 271
L L+ L + + ++ M S + + G +++A ++ L++ I VE H
Sbjct: 179 L---LRMMLGIFQFTSTS--TGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE-H 232
Query: 272 RNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXXXX 331
+ L + + ++F S F N ++ +
Sbjct: 233 NQRTL----DPNSPRDFIDS----FLIRMQEEEKNPNT--EFYLKNLVMTTLNLFIGGTE 282
Query: 332 XXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHP 391
+ + LM+HP+V KV EE+ +V+G + + +++ Y++AV+ E R
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 392 AVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDD-GIAS 450
+P+ L RR + + + +PK T + + ++ RDP + NP F P+ FL++ G
Sbjct: 343 VIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK 402
Query: 451 KFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
K D ++PF G+R C G LA L +++ +F
Sbjct: 403 KSD------AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 201/465 (43%), Gaps = 35/465 (7%)
Query: 34 KSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP 93
K + LPPGP LP G L T ++ ++S YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLD 153
+R+ + DQ F+ R +A + G + +SN G ++LR+F + + +
Sbjct: 63 DAVREALVDQAEEFSGRGE-QATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 154 ACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTN 213
R QE + D G ID T+ I ++++G+ + K+K +
Sbjct: 121 RGIEERIQEEAGFLIDALRGTG--GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 214 LRAGLKFKLAELMVLAGTPNISDVFPMLSWL--DIQGIERRAKKISLWLDNVINSTVEQH 271
L L+ L + + ++ M S + + G +++A + L++ I VE H
Sbjct: 179 L---LRMMLGIFQFTSTS--TGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVE-H 232
Query: 272 RNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSA---SSISMNQFKAVLAXXXXX 328
+ L + + ++F S F N ++ ++ M + +
Sbjct: 233 NQRTL----DPNSPRDFIDS----FLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETV 284
Query: 329 XXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFR 388
+ + LM+HP+V KV EE+ +V+G + + +++ Y++AV+ E R
Sbjct: 285 STT-----LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQR 339
Query: 389 LHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDD-G 447
+P+ L RR + + + +PK T + + ++ RDP + NP F P+ FL++ G
Sbjct: 340 FGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399
Query: 448 IASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
K D ++PF G+R C G LA L +++ +F
Sbjct: 400 QFKKSD------AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 215/487 (44%), Gaps = 48/487 (9%)
Query: 48 GLPVFGYLPFLGTT-DLHKKFT----ELSGVYGPIFKLWLGNKLCVVVSSPSLIRQV-VR 101
G+P LPFLG HK F E YG ++ + G + + ++ P +I+ V V+
Sbjct: 15 GIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 74
Query: 102 DQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQ 161
+ + F NR P V + + I+ + EW++LR + + L + Q
Sbjct: 75 ECYSVFTNRRPFGP---VGFMKSAISIAE-DEEWKRLRSL-LSPTFTSGKLKEMVPIIAQ 129
Query: 162 EVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALEL----KEKGTTNLRAG 217
+R+L + + GKP+ + ++ + + I + +G ++ ++ N +
Sbjct: 130 YGDVLVRNL-RREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKL 188
Query: 218 LKFKLAELMVLAGTPNISDVFPML-SWLDIQGIERRAKKISLWLDNVINSTVEQHRNKEL 276
L+F + L+ T VFP L L++ I ++++ +L + R KE
Sbjct: 189 LRFDFLDPFFLSIT-----VFPFLIPILEVLNICVFPREVTNFLRKSVK------RMKES 237
Query: 277 TVEGEERAGKNFE----GSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXXXXX 332
+E ++ +F S+N +S ++S + A
Sbjct: 238 RLEDTQKHRVDFLQLMIDSQNSK----------ETESHKALSDLELVAQSIIFIFAGYET 287
Query: 333 XXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPA 392
++ + M EL HP V +K+QEE+ V+ + + ++ YLD VV ET RL P
Sbjct: 288 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP- 346
Query: 393 VPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKF 452
+ + L R + I G IPK +M+ A+HRDPK W P +F PERF + K
Sbjct: 347 IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF-----SKKN 401
Query: 453 DYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVI 512
+ + + Y PFGSG R C G+ A + L +L +F ++ T++ L G ++
Sbjct: 402 KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLL 461
Query: 513 KKKEPLV 519
+ ++P+V
Sbjct: 462 QPEKPVV 468
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 215/487 (44%), Gaps = 48/487 (9%)
Query: 48 GLPVFGYLPFLGTT-DLHKKFT----ELSGVYGPIFKLWLGNKLCVVVSSPSLIRQV-VR 101
G+P LPFLG HK F E YG ++ + G + + ++ P +I+ V V+
Sbjct: 16 GIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 75
Query: 102 DQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQ 161
+ + F NR P V + + I+ + EW++LR + + L + Q
Sbjct: 76 ECYSVFTNRRPFGP---VGFMKSAISIAE-DEEWKRLRSL-LSPTFTSGKLKEMVPIIAQ 130
Query: 162 EVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALEL----KEKGTTNLRAG 217
+R+L + + GKP+ + ++ + + I + +G ++ ++ N +
Sbjct: 131 YGDVLVRNL-RREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKL 189
Query: 218 LKFKLAELMVLAGTPNISDVFPML-SWLDIQGIERRAKKISLWLDNVINSTVEQHRNKEL 276
L+F + L+ T VFP L L++ I ++++ +L + R KE
Sbjct: 190 LRFDFLDPFFLSIT-----VFPFLIPILEVLNICVFPREVTNFLRKSVK------RMKES 238
Query: 277 TVEGEERAGKNFE----GSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXXXXX 332
+E ++ +F S+N +S ++S + A
Sbjct: 239 RLEDTQKHRVDFLQLMIDSQNSK----------ETESHKALSDLELVAQSIIFIFAGYET 288
Query: 333 XXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPA 392
++ + M EL HP V +K+QEE+ V+ + + ++ YLD VV ET RL P
Sbjct: 289 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP- 347
Query: 393 VPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKF 452
+ + L R + I G IPK +M+ A+HRDPK W P +F PERF + K
Sbjct: 348 IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF-----SKKN 402
Query: 453 DYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVI 512
+ + + Y PFGSG R C G+ A + L +L +F ++ T++ L G ++
Sbjct: 403 KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLL 462
Query: 513 KKKEPLV 519
+ ++P+V
Sbjct: 463 QPEKPVV 469
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 217/487 (44%), Gaps = 48/487 (9%)
Query: 48 GLPVFGYLPFLGTT-DLHKKFT----ELSGVYGPIFKLWLGNKLCVVVSSPSLIRQV-VR 101
G+P LPFLG HK F E YG ++ + G + + ++ P +I+ V V+
Sbjct: 17 GIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 76
Query: 102 DQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQ 161
+ + F NR P V + + I+ + EW++LR + + L + Q
Sbjct: 77 ECYSVFTNRRPFGP---VGFMKSAISIAE-DEEWKRLRSL-LSPTFTSGKLKEMVPIIAQ 131
Query: 162 EVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALEL----KEKGTTNLRAG 217
+R+L + + GKP+ + ++ + + I + +G ++ ++ N +
Sbjct: 132 YGDVLVRNL-RREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKL 190
Query: 218 LKFKLAELMVLAGTPNISDVFPML-SWLDIQGIERRAKKISLWLDNVINSTVEQHRNKEL 276
L+F + L+ T VFP L L++ I ++++ N + +V+ R KE
Sbjct: 191 LRFDFLDPFFLSIT-----VFPFLIPILEVLNICVFPREVT----NFLRKSVK--RMKES 239
Query: 277 TVEGEERAGKNFE----GSRNKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXXXXX 332
+E ++ +F S+N +S ++S + A
Sbjct: 240 RLEDTQKHRVDFLQLMIDSQNSK----------ETESHKALSDLELVAQSIIFIFAGYET 289
Query: 333 XXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPA 392
++ + M EL HP V +K+QEE+ V+ + + ++ YLD VV ET RL P
Sbjct: 290 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP- 348
Query: 393 VPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKF 452
+ + L R + I G IPK +M+ A+HRDPK W P +F PERF + K
Sbjct: 349 IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF-----SKKN 403
Query: 453 DYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVI 512
+ + + Y PFGSG R C G+ A + L +L +F ++ T++ L G ++
Sbjct: 404 KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLL 463
Query: 513 KKKEPLV 519
+ ++P+V
Sbjct: 464 QPEKPVV 470
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 182/448 (40%), Gaps = 49/448 (10%)
Query: 67 FTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVSYG--GN 124
F +L +G +F L L VV++ + +R+ + A+R P ++ +G
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 125 DIAWSNYGPEWRKLRKFFVGKMMN----NESLDACYALRKQEVKNTIRDLYNNDNKIGKP 180
+ + YGP WR+ R+F V + N +SL+ +E N+ + +P
Sbjct: 96 GVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVT---EEAACLCAAFANHSGRPFRP 152
Query: 181 IDIGELSFSTLVCAI--------QNMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTP 232
+ + + S ++ ++ + + L+L ++G L+ L + VL P
Sbjct: 153 NGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIP 212
Query: 233 NISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSR 292
++ + R K LD ++ +HR + + F
Sbjct: 213 ALAG-----------KVLRFQKAFLTQLDELLT----EHRMTWDPAQPPRDLTEAFLAEM 257
Query: 293 NKNFXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMK 352
K + SS + + V+A + W + ++ HP V +
Sbjct: 258 EK----------AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQR 307
Query: 353 KVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNI 412
+VQ+E+ V+G E + + Y AV+ E R VPL + S + G+ I
Sbjct: 308 RVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRI 367
Query: 413 PKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLD-DGIASKFDYSGNNFQYLPFGSGRRMC 471
PK TT++ N+ ++ +D +W+ P +F PE FLD G K + +LPF +GRR C
Sbjct: 368 PKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPE------AFLPFSAGRRAC 421
Query: 472 AGIALAERMLMFVLASLLHSFEWELPTG 499
G LA L SLL F + +PTG
Sbjct: 422 LGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 177/445 (39%), Gaps = 43/445 (9%)
Query: 67 FTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVSYG--GN 124
F +L +G +F L L VV++ + +R+ + A+R P ++ +G
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 125 DIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRD-----LYNNDNKIGK 179
+ + YGP WR+ R+F V + N L K+ ++ + + N G+
Sbjct: 96 GVFLARYGPAWREQRRFSVSTLRN-------LGLGKKSLEQWVTEEAACLCAAFANHSGR 148
Query: 180 PIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNL----RAGLKFKLAELMVLAGTPNIS 235
P L + I ++ G E + L + GLK + L + +
Sbjct: 149 PFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVD 208
Query: 236 DVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRNKN 295
P L+ + R K LD ++ +HR + + F K
Sbjct: 209 RHIPALA----GKVLRFQKAFLTQLDELLT----EHRMTWDPAQPPRDLTEAFLAEMEK- 259
Query: 296 FXXXXXXXXXNDDSASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQ 355
+ SS + + V+A + W + ++ HP V ++VQ
Sbjct: 260 ---------AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQ 310
Query: 356 EELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKD 415
+E+ V+G E + + Y AV+ E R VPL + S + G+ IPK
Sbjct: 311 QEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKG 370
Query: 416 TTIMLNVRAIHRDPKLWDNPLQFRPERFLD-DGIASKFDYSGNNFQYLPFGSGRRMCAGI 474
TT++ N+ ++ +D +W+ P +F PE FLD G K + +LPF +GRR C G
Sbjct: 371 TTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPE------AFLPFSAGRRACLGE 424
Query: 475 ALAERMLMFVLASLLHSFEWELPTG 499
LA L SLL F + +PTG
Sbjct: 425 PLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 193/469 (41%), Gaps = 46/469 (9%)
Query: 64 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDP-PKAALVVSYG 122
H + S VYG IF L LG VV++ ++++ + Q FA+R P + G
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG 96
Query: 123 GNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNND---NKIGK 179
G + S YG W R+ V N Y + E K + ND G+
Sbjct: 97 G--LLNSRYGRGWVDHRRLAV-----NSFRYFGYGQKSFESKILEETKFFNDAIETYKGR 149
Query: 180 PIDIGELSFSTLVCAIQNML-WGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNI--SD 236
P D +L + V I N++ +GE ++ T+ + ++ +E + LA + ++ +
Sbjct: 150 PFDFKQL-ITNAVSNITNLIIFGERFTYED---TDFQHMIEL-FSENVELAASASVFLYN 204
Query: 237 VFPMLSWLDI---QGIERRAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRN 293
FP + L Q + R A + +L +I E+A N +
Sbjct: 205 AFPWIGILPFGKHQQLFRNAAVVYDFLSRLI-----------------EKASVNRKPQLP 247
Query: 294 KNFXXXXXXXXXN--DDSASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVM 351
++F +D +S+ S + ++ W + + +P +
Sbjct: 248 QHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQ 307
Query: 352 KKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYN 411
+VQ+E+ ++G + ++ Y +AV+ E R VPL + SE + + GY+
Sbjct: 308 GQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 367
Query: 412 IPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMC 471
IPK TT++ N+ ++H D K W +P F PERFLD Y +PF GRR C
Sbjct: 368 IPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-----GYFAKKEALVPFSLGRRHC 422
Query: 472 AGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPLVA 520
G LA + +LL F P +L + G+ ++ + L+
Sbjct: 423 LGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLIC 471
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 193/469 (41%), Gaps = 46/469 (9%)
Query: 64 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDP-PKAALVVSYG 122
H + S VYG IF L LG VV++ ++++ + Q FA+R P + G
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG 96
Query: 123 GNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNND---NKIGK 179
G + S YG W R+ V N Y + E K + ND G+
Sbjct: 97 G--LLNSRYGRGWVDHRRLAV-----NSFRYFGYGQKSFESKILEETKFFNDAIETYKGR 149
Query: 180 PIDIGELSFSTLVCAIQNML-WGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNI--SD 236
P D +L + V I N++ +GE ++ T+ + ++ +E + LA + ++ +
Sbjct: 150 PFDFKQL-ITNAVSNITNLIIFGERFTYED---TDFQHMIEL-FSENVELAASASVFLYN 204
Query: 237 VFPMLSWLDI---QGIERRAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRN 293
FP + L Q + R A + +L +I E+A N +
Sbjct: 205 AFPWIGILPFGKHQQLFRNAAVVYDFLSRLI-----------------EKASVNRKPQLP 247
Query: 294 KNFXXXXXXXXXN--DDSASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVM 351
++F +D +S+ S + ++ W + + +P +
Sbjct: 248 QHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQ 307
Query: 352 KKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYN 411
+VQ+E+ ++G + ++ Y +AV+ E R VPL + SE + + GY+
Sbjct: 308 GQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 367
Query: 412 IPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMC 471
IPK TT++ N+ ++H D K W +P F PERFLD Y +PF GRR C
Sbjct: 368 IPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-----GYFAKKEALVPFSLGRRHC 422
Query: 472 AGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPLVA 520
G LA + +LL F P +L + G+ ++ + L+
Sbjct: 423 LGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLIC 471
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 182/448 (40%), Gaps = 49/448 (10%)
Query: 65 KKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVSY-GG 123
K F YG +F + LG + V++ IR+ + D+ F+ R K A+V + G
Sbjct: 34 KSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRG--KIAMVDPFFRG 91
Query: 124 NDIAWSNYGPEWRKLRKFFVGKM----MNNESLDACYALRKQEVKNTIRDLYNNDNKIGK 179
+ ++N G W+ LR+F V M M S++ ++E + I +L + +
Sbjct: 92 YGVIFAN-GNRWKVLRRFSVTTMRDFGMGKRSVEERI---QEEAQCLIEELRKSKGALMD 147
Query: 180 PIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFP 239
P + + + ++C+I ++G+ +++ + L ++ L IS VF
Sbjct: 148 PTFLFQSITANIICSI---VFGKRFHYQDQEFLKM-LNLFYQTFSL--------ISSVFG 195
Query: 240 MLSWL------DIQGIERRAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRN 293
L L G R+ K ++ I +VE+HR + + S
Sbjct: 196 QLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHR-------------ETLDPSAP 242
Query: 294 KNFXXXXXXXXXNDDS--ASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVM 351
++ + S S S + + ++++P V
Sbjct: 243 RDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVA 302
Query: 352 KKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYN 411
++V E+ QV+G E +++ Y +AV+ E R +P+ +P ++ ++ GY
Sbjct: 303 ERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYI 362
Query: 412 IPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMC 471
IPKDT + L + DP ++ P F P+ FLD A K ++PF G+R+C
Sbjct: 363 IPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALK-----KTEAFIPFSLGKRIC 417
Query: 472 AGIALAERMLMFVLASLLHSFEWELPTG 499
G +A L ++L +F P
Sbjct: 418 LGEGIARAELFLFFTTILQNFSMASPVA 445
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ +T+ L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 278 LLSFTLYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 336
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K IM+ + +HRD +W D+ +FRPERF + +
Sbjct: 337 F-SLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 395
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 396 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 448
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 449 GFVVKAKSKKIPLGGIPSPSTEQS 472
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 306 NDDSASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMD 365
DD+ I + + + W + L HP+ ++++E+ V G
Sbjct: 252 KDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGR 311
Query: 366 SCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAI 425
E + +L + V+ E RL PAV +L RRA S +GGY IP I+ + AI
Sbjct: 312 PVAFE-DVRKLRHTGNVIVEAMRLRPAV-WVLTRRAVAESELGGYRIPAGADIIYSPYAI 369
Query: 426 HRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVL 485
RDPK +D+ L+F P+R+L + A+ Y+ PF +G+R C + L +
Sbjct: 370 QRDPKSYDDNLEFDPDRWLPERAANVPKYAMK-----PFSAGKRKCPSDHFSMAQLTLIT 424
Query: 486 ASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPLV 519
A+L + +E G+ N + + GI ++ + LV
Sbjct: 425 AALATKYRFEQVAGS--NDAVRVGITLRPHDLLV 456
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
+T+ EL + P+++ ++Q E+ +V+G ++ L RL YL V+KE+ RL+P
Sbjct: 265 FTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTF- 323
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R E + I G +P +T ++ + + R +++PL F P+RF +F
Sbjct: 324 RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFT----- 378
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPL 518
Y PF G R C G A+ + V+A LL E+ L G + L E+ +K +P+
Sbjct: 379 --YFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQ--ATLKPLDPV 434
Query: 519 VAIPTPR 525
+ PR
Sbjct: 435 LCTLRPR 441
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P VP
Sbjct: 275 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPA 333
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 334 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 392
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 393 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 445
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 446 GFVVKAKSKKIPLGGIPSPSTEQS 469
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 20/179 (11%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVV----------GMDSCVEEFHLSRLMYLDAVVKETFR 388
W++ +++++P+ MK EE+ + + G C+ + L+ L LD+++KE+ R
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 389 LHPAVPLLLPRRASESSNI----GGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFL 444
L A L R A E + G YNI KD I L + +H DP+++ +PL F+ +R+L
Sbjct: 339 LSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 445 DDGIASKFDYSGN----NFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTG 499
D+ +K + N + Y+PFGSG +C G A + L +L FE EL G
Sbjct: 397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 20/179 (11%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVV----------GMDSCVEEFHLSRLMYLDAVVKETFR 388
W++ +++++P+ MK EE+ + + G C+ + L+ L LD+++KE+ R
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 389 LHPAVPLLLPRRASESSNI----GGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFL 444
L A L R A E + G YNI KD I L + +H DP+++ +PL F+ +R+L
Sbjct: 339 LSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 445 DDGIASKFDYSGN----NFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTG 499
D+ +K + N + Y+PFGSG +C G A + L +L FE EL G
Sbjct: 397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 275 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 333
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 334 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 392
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 393 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 445
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 446 GFVVKAKSKKIPLGGIPSPSTEQS 469
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 332 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 391 FK-------PFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 444 GFVVKAKSKKIPLGGIPSPSTEQS 467
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 332 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 391 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 444 GFVVKAKSKKIPLGGIPSPSTEQS 467
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 443 GFVVKAKSKKIPLGGIPSPSTEQS 466
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 275 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPA 333
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 334 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 392
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 393 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 445
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 446 GFVVKAKSKKIPLGGIPSPSTEQS 469
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPP 331
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 332 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 391 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
Query: 509 GIVIK---KKEPLVAIPTPRLSNS 529
G V+K KK PL IP+P S
Sbjct: 444 GFVVKAKSKKIPLGGIPSPSTEQS 467
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 332 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 391 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPE 443
Query: 509 GIVIK---KKEPLVAIPTP 524
G V+K KK PL IP+P
Sbjct: 444 GFVVKAKSKKIPLGGIPSP 462
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 332 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 391 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
Query: 509 GIVIK---KKEPLVAIPTP 524
G V+K KK PL IP+P
Sbjct: 444 GFVVKAKSKKIPLGGIPSP 462
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPE 442
Query: 509 GIVIK---KKEPLVAIPTP 524
G V+K KK PL IP+P
Sbjct: 443 GFVVKAKSKKIPLGGIPSP 461
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 19/191 (9%)
Query: 344 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASE 403
L+++P V++K EE A+V+ +D + +L Y+ V+ E R+ P P A E
Sbjct: 281 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAF-SLYAKE 338
Query: 404 SSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFDYSGNNFQY 461
+ +GG Y + K +M+ + +HRD +W D+ +FRPERF + + +
Sbjct: 339 DTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFK------ 392
Query: 462 LPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF-----GIVIK--- 513
PFG+G+R C G A VL +L F++E T +L++ E G VIK
Sbjct: 393 -PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETLTLKPKGFVIKAKS 451
Query: 514 KKEPLVAIPTP 524
KK PL IP+P
Sbjct: 452 KKIPLGGIPSP 462
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Query: 44 PGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQ 103
P P+ LP L T + +++ G IFK ++ +SS L+++
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVKEAC--D 64
Query: 104 DTTFANRDPPKAALVVSYGGNDIAWS-NYGPEWRKLRKFFVGKMMNNESLDACYALRKQE 162
++ F V + G+ +A S + W+K R + + ++ +++ +A+
Sbjct: 65 ESRFDKNLSQARKFVRDFAGDGLATSWTHEKNWKKARNILLPR-LSQQAMKGYHAMMVDI 123
Query: 163 VKNTIR--DLYNNDNKIGKPIDIGELSFSTL-VCAI 195
++ + N+D I P D+ L+ T+ +C
Sbjct: 124 AVQLVQKWERLNSDEHIEVPEDMTRLTLDTIGLCGF 159
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPE 442
Query: 509 GIVIK---KKEPLVAIPTP 524
G V+K KK PL IP+P
Sbjct: 443 GFVVKAKSKKIPLGGIPSP 461
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPA 331
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 332 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 391 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPE 443
Query: 509 GIVIK---KKEPLVAIPTP 524
G V+K KK PL IP+P
Sbjct: 444 GFVVKAKSKKIPLGGIPSP 462
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETQLLKPE 442
Query: 509 GIVIK---KKEPLVAIPTP 524
G V+K KK PL IP+P
Sbjct: 443 GFVVKAKSKKIPLGGIPSP 461
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P ++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 273 LLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 332 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHA 390
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 391 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
Query: 509 GIVIK---KKEPLVAIPTP 524
G V+K KK PL IP+P
Sbjct: 444 GFVVKAKSKKIPLGGIPSP 462
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P ++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAIPTP 524
G V+K KK PL IP+P
Sbjct: 443 GFVVKAKSKKIPLGGIPSP 461
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
W + L ++PQ +++ +E+ V+ + L + YL A +KE+ RL P+VP
Sbjct: 305 WILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT- 363
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R + + +G Y +PK T + LN + + +++ +FRPER+L + N
Sbjct: 364 RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQK------EKKINP 417
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFE 493
F +LPFG G+RMC G LAE L L ++ ++
Sbjct: 418 FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 30/162 (18%)
Query: 39 NATLPPGPRGLPVFGYLPFL----GTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPS 94
N T PGP P+ G L + G H E YG IF++ LG+ V + SPS
Sbjct: 22 NVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPS 81
Query: 95 LIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNY------GPEWRKLRKFFVGKMMN 148
L+ + R + P + + D Y G EW+++R F K+M
Sbjct: 82 LLEALYRTESA-----HPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMK 136
Query: 149 -----------NESLDACYALRKQEV---KNTIRDLYNNDNK 176
NE L A + R E+ + I DLY+ NK
Sbjct: 137 PVEIMKLDKKINEVL-ADFLERMDELCDERGRIPDLYSELNK 177
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++KV EE +V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKVAEEATRVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 19/196 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAI 521
G V+K KK PL I
Sbjct: 443 GFVVKAKSKKIPLGGI 458
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 19/196 (9%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIK---KKEPLVAI 521
G V+K KK PL I
Sbjct: 443 GFVVKAKSKKIPLGGI 458
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ PFG+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 344 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASE 403
L QH + ++V++E ++ E L ++ YLD V++E RL P V R +
Sbjct: 270 LGQHSDIRERVRQEQNKLQLSQELTAE-TLKKMPYLDQVLQEVLRLIPPVGGGF-RELIQ 327
Query: 404 SSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLP 463
G++ PK + + H DP L+ +P +F PERF DG A+ F ++P
Sbjct: 328 DCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATH----NPPFAHVP 383
Query: 464 FGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNL 504
FG G R C G A + L+ F+W L G L L
Sbjct: 384 FGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLEL 424
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 42 LPPGPRGLPVFG-YLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVV 100
+PPG GLP G L FL D KK + +GPIFK L K + +S R +
Sbjct: 13 IPPGDFGLPWLGETLNFLNDGDFGKKRQQ---QFGPIFKTRLFGKNVIFISGALANRFLF 69
Query: 101 RDQDTTF 107
+ TF
Sbjct: 70 TKEQETF 76
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ P+G+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ P+G+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ P G+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
++ + + L+++P V++K EE A+V+ +D + +L Y+ V+ E RL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 396 LLPRRASESSNIGG-YNIPKDTTIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFD 453
A E + +GG Y + K +M+ + +HRD +W D+ +FRPERF + +
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKF----- 508
+ P G+G+R C G A VL +L F++E T +L++ E
Sbjct: 390 FK-------PAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
Query: 509 GIVIKKK 515
G V+K K
Sbjct: 443 GFVVKAK 449
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/477 (21%), Positives = 183/477 (38%), Gaps = 42/477 (8%)
Query: 31 NVKKSRKANATLPPGPRG-LPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVV 89
+ K R + PG G L ++ + G+ +H + E YGPI++ LGN V
Sbjct: 3 STKTPRPYSEIPSPGDNGWLNLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESVY 62
Query: 90 VSSPSLIRQVVRDQDTTFANRD-PPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMN 148
+ P + + + + + D PP A Y W+K R ++M
Sbjct: 63 IIHPEDVAHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFKKSGTWKKDRVVLNTEVMA 122
Query: 149 NESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELS---FSTLVCAIQNMLWGEALE 205
E++ L ++ + L+ + G +G++ F +I N+++GE L
Sbjct: 123 PEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLG 182
Query: 206 LKEKGTTN------LRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLW 259
+ E+ T N + A K + +L P + +F +W D ++ W
Sbjct: 183 MLEE-TVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRD---------HVAAW 232
Query: 260 LDNVINSTVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSISMNQFK 319
D + N + E+ ++ R K + + + K
Sbjct: 233 -DTIFN-------------KAEKYTEIFYQDLRRKTEFRNYPGILYCLLKSEKMLLEDVK 278
Query: 320 AVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYL 379
A + ++W + E+ + V + ++EE+ L + L
Sbjct: 279 ANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPLL 338
Query: 380 DAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFR 439
A +KET RLHP + + L R + Y IP T + + + A+ RDP + +P +F
Sbjct: 339 KASIKETLRLHP-ISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFD 397
Query: 440 PERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
P R+L D +F+ L FG G R C G +AE + L +L +F+ E+
Sbjct: 398 PTRWLSK------DKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM 448
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
WT+ ELM+H V +EL ++ G V L ++ L+ V+KET RLHP + +L+
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM- 325
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R A + G+ I + + + +R P+ + +P F P R+ + + N
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQ----PRQEDLLNR 381
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPL 518
+ ++PFG+GR C G A A + + + LL +E+E+ + ++ +V++ +P
Sbjct: 382 WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP- 440
Query: 519 VAIPTPRLSNSELYH 533
A+ R + +H
Sbjct: 441 AAVRYRRRTGVHHHH 455
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
WT+ ELM+H V +EL ++ G V L ++ L+ V+KET RLHP + +L+
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM- 325
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R A + G+ I + + + +R P+ + +P F P R+ + + N
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQ----PRQEDLLNR 381
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPL 518
+ ++PFG+GR C G A A + + + LL +E+E+ + ++ +V++ +P
Sbjct: 382 WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP- 440
Query: 519 VAIPTPRLSNSELYH 533
A+ R + +H
Sbjct: 441 AAVRYRRRTGVHHHH 455
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
WT+ ELM+H V +EL ++ G V L ++ L+ V+KET RLHP + +L+
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM- 325
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R A + G+ I + + + +R P+ + +P F P R+ + + N
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQ----PRQEDLLNR 381
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEP 517
+ ++PFG+GR C G A A + + + LL +E+E+ + ++ +V++ +P
Sbjct: 382 WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP 440
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
WT+ ELM+H V +EL ++ G V L ++ L+ V+KET RLHP + +L+
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM- 325
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R A + G+ I + + + +R P+ + +P F P R+ + + N
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQ----PRQEDLLNR 381
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPL 518
+ ++PFG+GR C G A A + + + LL +E+E+ + ++ +V++ +P
Sbjct: 382 WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP- 440
Query: 519 VAIPTPRLSNSELYH 533
A+ R + +H
Sbjct: 441 AAVRYRRRTGVHHHH 455
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 372 HLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKL 431
L L LD +KET RL P + +++ R A + GY IP + ++ R
Sbjct: 308 QLKDLNLLDRCIKETLRLRPPIMIMM-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDS 366
Query: 432 WDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHS 491
W L F P+R+L D AS G F Y+PFG+GR C G A + + +++L
Sbjct: 367 WVERLDFNPDRYLQDNPAS-----GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRL 421
Query: 492 FEWELPTG 499
+E++L G
Sbjct: 422 YEFDLIDG 429
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
Query: 340 TMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPR 399
T+ EL ++P V + +++E S + + L L A +KET RL+P V L L R
Sbjct: 300 TLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYP-VGLFLER 358
Query: 400 RASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNF 459
S + Y+IP T + + + ++ R+ L+ P ++ P+R+LD SG NF
Sbjct: 359 VVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLD------IRGSGRNF 412
Query: 460 QYLPFGSGRRMCAG 473
++PFG G R C G
Sbjct: 413 HHVPFGFGMRQCLG 426
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 344 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASE 403
+ +HP V + + +E+ V+G + ++ + +L ++ + E+ R P V L++ R+A E
Sbjct: 322 IAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVM-RKALE 379
Query: 404 SSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQF--RPERFLDDGIASKFDYSGNNFQY 461
I GY + K T I+LN+ +HR L+F +P F + A Y FQ
Sbjct: 380 DDVIDGYPVKKGTNIILNIGRMHR--------LEFFPKPNEFTLENFAKNVPY--RYFQ- 428
Query: 462 LPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVI----KKKEP 517
PFG G R CAG +A M+ +L +LL F + G + +K + + K
Sbjct: 429 -PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNM 487
Query: 518 LVAIPTPRLSNSELYH 533
L I TPR S+ L H
Sbjct: 488 LEMIFTPRNSDRCLEH 503
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 191/499 (38%), Gaps = 65/499 (13%)
Query: 31 NVKKSRKANATLPPGPRG-LPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVV 89
+ + R N PG G L ++ + GT +H + YGPI++ LGN V
Sbjct: 1 STRSPRPFNEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVY 60
Query: 90 VSSPSLIRQVVRDQDTTFANRDP-PKAALVVSYGGNDIAWSNY-----------GPEWRK 137
V P D F + P P+ L+ + +A+ Y W+K
Sbjct: 61 VIDPE-------DVALLFKSEGPNPERFLIPPW----VAYHQYYQRPIGVLLKKSAAWKK 109
Query: 138 LRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELS---FSTLVCA 194
R ++M E+ L ++ + L+ K G G++S F +
Sbjct: 110 DRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFES 169
Query: 195 IQNMLWGEALELKEK-----GTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGI 249
I N+++GE + E+ + A + + +L P++ +F +W D
Sbjct: 170 ITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD---- 225
Query: 250 ERRAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDS 309
++ W +VI S + + + E ++ GS + ++ +
Sbjct: 226 -----HVAAW--DVIFSKADIY-TQNFYWELRQK------GSVHHDYRGILYRLLGD--- 268
Query: 310 ASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVE 369
S +S KA + ++W + E+ ++ +V ++ E+
Sbjct: 269 -SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDM 327
Query: 370 EFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDP 429
L + L A +KET RLHP + + L R + Y IP T + + + A+ R+P
Sbjct: 328 ATMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP 386
Query: 430 KLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
+ +P F P R+L D + F+ L FG G R C G +AE + L ++L
Sbjct: 387 TFFFDPENFDPTRWLSK------DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINML 440
Query: 490 HSFEWELP----TGTKLNL 504
+F E+ GT NL
Sbjct: 441 ENFRVEIQHLSDVGTTFNL 459
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 189/494 (38%), Gaps = 65/494 (13%)
Query: 36 RKANATLPPGPRG-LPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPS 94
R N PG G L ++ + GT +H + YGPI++ LGN V V P
Sbjct: 3 RPFNEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPE 62
Query: 95 LIRQVVRDQDTTFANRDP-PKAALVVSYGGNDIAWSNY-----------GPEWRKLRKFF 142
D F + P P+ L+ + +A+ Y W+K R
Sbjct: 63 -------DVALLFKSEGPNPERFLIPPW----VAYHQYYQRPIGVLLKKSAAWKKDRVAL 111
Query: 143 VGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELS---FSTLVCAIQNML 199
++M E+ L ++ + L+ K G G++S F +I N++
Sbjct: 112 NQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVI 171
Query: 200 WGEALELKEK-----GTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAK 254
+GE + E+ + A + + +L P++ +F +W D
Sbjct: 172 FGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD--------- 222
Query: 255 KISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRNKNFXXXXXXXXXNDDSASSIS 314
++ W +VI S + + + E ++ GS + ++ + S +S
Sbjct: 223 HVAAW--DVIFSKADIY-TQNFYWELRQK------GSVHHDYRGILYRLLGD----SKMS 269
Query: 315 MNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLS 374
KA + ++W + E+ ++ +V ++ E+ L
Sbjct: 270 FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQ 329
Query: 375 RLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDN 434
+ L A +KET RLHP + + L R + Y IP T + + + A+ R+P + +
Sbjct: 330 LVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFD 388
Query: 435 PLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEW 494
P F P R+L D + F+ L FG G R C G +AE + L ++L +F
Sbjct: 389 PENFDPTRWLSK------DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV 442
Query: 495 ELP----TGTKLNL 504
E+ GT NL
Sbjct: 443 EIQHLSDVGTTFNL 456
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
+ ET R P V L+ PR+ S+ + +GG I KDT + + A +RDP+ ++ P F R
Sbjct: 306 IAETLRYKPPVQLI-PRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFV 484
D GI S F + ++L FGSG C G A A+ + V
Sbjct: 365 -EDLGIKSAFSGAA---RHLAFGSGIHNCVGTAFAKNEIEIV 402
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
AV++ET R P V L+ R A + IG + +PK T++L + A HRDP + P +F P
Sbjct: 291 AVIEETMRYDPPV-QLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+R ++L FG G C G LA L +L F
Sbjct: 350 DR--------------AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 383 VKETFRLHPAVPLL--LPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
V+E R +P P L L ++ +N K T+++L++ + DP+LWD+P +FRP
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNC---EFKKGTSVLLDLYGTNHDPRLWDHPDEFRP 336
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGR----RMCAGIALAERMLMFVLASLLHSFEWEL 496
ERF + N F +P G G C G + ++ L L+H E+++
Sbjct: 337 ERFA--------EREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDV 388
Query: 497 P 497
P
Sbjct: 389 P 389
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 37/151 (24%)
Query: 341 MAELMQHPQVMKKVQE--ELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
M + QHP K++E ELA V+E R P +P+
Sbjct: 266 MYDFAQHPDQWMKIKENPELAP--------------------QAVEEVLRWSPTLPVTAT 305
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS-GN 457
R A+E + G IP T + + HRDP+++ + A +FD +
Sbjct: 306 RVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD--------------ADRFDITVKR 351
Query: 458 NFQYLPFGSGRRMCAGIALAERMLMFVLASL 488
+ FG G C G ALA L +A+L
Sbjct: 352 EAPSIAFGGGPHFCLGTALARLELTEAVAAL 382
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 339 WTMAELM-----QHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAV 393
W+M LM +H + ++K EE + ++ ++E + + + +E+ R P +
Sbjct: 275 WSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL 329
Query: 394 PLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFD 453
L+L R+ +G Y +PK I + H D + + P ++ PER D+ + F
Sbjct: 330 -LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGAF- 385
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
+ FG+G C G + +LA+ S++++L
Sbjct: 386 --------IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 339 WTMAELM-----QHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAV 393
W+M LM +H + ++K EE + ++ ++E + + + +E+ R P +
Sbjct: 276 WSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL 330
Query: 394 PLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFD 453
L+L R+ +G Y +PK I + H D + + P ++ PER D+ + F
Sbjct: 331 -LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGAF- 386
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
+ FG+G C G + +LA+ S++++L
Sbjct: 387 --------IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 37/151 (24%)
Query: 341 MAELMQHPQVMKKVQE--ELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
M + QHP K++E ELA V+E R P +P+
Sbjct: 256 MYDFAQHPDQWMKIKENPELAP--------------------QAVEEVLRWSPTLPVTAT 295
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS-GN 457
R A+E + G IP T + + HRDP+++ + A +FD +
Sbjct: 296 RVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD--------------ADRFDITVKR 341
Query: 458 NFQYLPFGSGRRMCAGIALAERMLMFVLASL 488
+ FG G C G ALA L +A+L
Sbjct: 342 EAPSIAFGGGPHFCLGTALARLELTEAVAAL 372
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 339 WTMAELM-----QHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAV 393
W+M LM +H + ++K EE + ++ ++E + + + +E+ R P +
Sbjct: 288 WSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL 342
Query: 394 PLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFD 453
L+L R+ +G Y +PK I + H D + + P ++ PER D+ + F
Sbjct: 343 -LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGAF- 398
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
+ FG+G C G + +LA+ S++++L
Sbjct: 399 --------IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 339 WTMAELM-----QHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAV 393
W+M LM +H + ++K EE + ++ ++E + + + +E+ R P +
Sbjct: 288 WSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL 342
Query: 394 PLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFD 453
L+L R+ +G Y +PK I + H D + + P ++ PER D+ + F
Sbjct: 343 -LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGAF- 398
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
+ FG+G C G + +LA+ S++++L
Sbjct: 399 --------IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 339 WTMAELM-----QHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAV 393
W+M LM +H + ++K EE + ++ ++E + + + +E+ R P +
Sbjct: 275 WSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL 329
Query: 394 PLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFD 453
L+L R+ +G Y +PK I + H D + + P ++ PER D+ + F
Sbjct: 330 -LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGAF- 385
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
+ FG+G C G + +LA+ S++++L
Sbjct: 386 --------IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 339 WTMAELM-----QHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAV 393
W+M LM +H + ++K EE + ++ ++E + + + +E+ R P +
Sbjct: 274 WSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL 328
Query: 394 PLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFD 453
L+L R+ +G Y +PK I + H D + + P ++ PER D+ + F
Sbjct: 329 -LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGAF- 384
Query: 454 YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
+ FG+G C G + +LA+ S++++L
Sbjct: 385 --------IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 339 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLP 398
W M L+ HP+ ++ V+EE+ G +EE + ++ D+V+ ET RL A L+
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG--GKHLRLEERQKNTPVF-DSVLWETLRLTAAA--LIT 329
Query: 399 RRASES-----SNIGGYNIPK-DTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKF 452
R ++ SN Y++ + D + + DP++ P F+ +RFL+ K
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389
Query: 453 DYSGN----NFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
D+ N + +P+G+ +C G A + ++ ++L F+ EL
Sbjct: 390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVEL 437
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 310 ASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQ-------VMKKVQEELAQVV 362
+ +S+++ ++ W+M LM HP+ + K++ E AQ+
Sbjct: 250 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQL- 307
Query: 363 GMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNV 422
D+ ++E + + + V+E+ R P + L++ R +G Y +PK I +
Sbjct: 308 NYDNVMDE-----MPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSP 361
Query: 423 RAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLM 482
H D + + NP + PER D+ + F + FG+G C G A +
Sbjct: 362 LLSHHDEEAFPNPRLWDPER--DEKVDGAF---------IGFGAGVHKCIGQKFALLQVK 410
Query: 483 FVLASLLHSFEWEL 496
+LA+ ++++L
Sbjct: 411 TILATAFREYDFQL 424
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 310 ASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQ-------VMKKVQEELAQVV 362
+ +S+++ ++ W+M LM HP+ + K++ E AQ+
Sbjct: 259 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQL- 316
Query: 363 GMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNV 422
D+ ++E + + + V+E+ R P + L++ R +G Y +PK I +
Sbjct: 317 NYDNVMDE-----MPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSP 370
Query: 423 RAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLM 482
H D + + NP + PER D+ + F + FG+G C G A +
Sbjct: 371 LLSHHDEEAFPNPRLWDPER--DEKVDGAF---------IGFGAGVHKCIGQKFALLQVK 419
Query: 483 FVLASLLHSFEWEL 496
+LA+ ++++L
Sbjct: 420 TILATAFREYDFQL 433
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 310 ASSISMNQFKAVLAXXXXXXXXXXXXMVEWTMAELMQHPQ-------VMKKVQEELAQVV 362
+ +S+++ ++ W+M LM HP+ + K++ E AQ+
Sbjct: 244 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQL- 301
Query: 363 GMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNV 422
D+ ++E + + + V+E+ R P + L++ R +G Y +PK I +
Sbjct: 302 NYDNVMDE-----MPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSP 355
Query: 423 RAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLM 482
H D + + NP + PER D+ + F + FG+G C G A +
Sbjct: 356 LLSHHDEEAFPNPRLWDPER--DEKVDGAF---------IGFGAGVHKCIGQKFALLQVK 404
Query: 483 FVLASLLHSFEWEL 496
+LA+ ++++L
Sbjct: 405 TILATAFREYDFQL 418
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 378 YLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQ 437
Y + V+E R +P P ++ R AS+ G P+ ++L++ + D W +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 438 FRPERFLDDGIASKFDYSGNNFQYLPFGSGRRM----CAG--IALAERMLMFVLASLL-H 490
FRPERF + ++F ++P G G C G I LA +M V A LL +
Sbjct: 324 FRPERFR--------AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLA---IMKVAAHLLVN 372
Query: 491 SFEWELP 497
+ +++P
Sbjct: 373 AMRYDVP 379
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 378 YLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQ 437
Y + V+E R +P P ++ R AS+ G P+ ++L++ + D W +P +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 438 FRPERFLDDGIASKFDYSGNNFQYLPFGSGRRM----CAG--IALAERMLMFVLASLL-H 490
FRPERF + ++F ++P G G C G I LA +M V A LL +
Sbjct: 332 FRPERFR--------AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLA---IMKVAAHLLVN 380
Query: 491 SFEWELP 497
+ +++P
Sbjct: 381 AMRYDVP 387
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 378 YLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQ 437
Y + V+E R +P P ++ R AS+ G P+ ++L++ + D W +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 438 FRPERFLDDGIASKFDYSGNNFQYLPFGSGRRM----CAG--IALAERMLMFVLASLL-H 490
FRPERF + ++F ++P G G C G I LA +M V A LL +
Sbjct: 324 FRPERFR--------AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLA---IMKVAAHLLVN 372
Query: 491 SFEWELP 497
+ +++P
Sbjct: 373 AMRYDVP 379
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 378 YLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQ 437
Y + V+E R +P P ++ R AS+ G P+ ++L++ + D W +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 438 FRPERFLDDGIASKFDYSGNNFQYLPFGSGRRM----CAG--IALAERMLMFVLASLL-H 490
FRPERF + ++F ++P G G C G I LA +M V A LL +
Sbjct: 324 FRPERFR--------AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLA---IMKVAAHLLVN 372
Query: 491 SFEWELP 497
+ +++P
Sbjct: 373 AMRYDVP 379
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 378 YLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQ 437
Y + V+E R +P P ++ R AS+ G P+ ++L++ + D W +P +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 438 FRPERFLDDGIASKFDYSGNNFQYLPFGSGRRM----CAG--IALAERMLMFVLASLL-H 490
FRPERF + ++F ++P G G C G I LA +M V A LL +
Sbjct: 332 FRPERFR--------AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLA---IMKVAAHLLVN 380
Query: 491 SFEWELP 497
+ +++P
Sbjct: 381 AMRYDVP 387
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 339 WTMAELM-----QHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAV 393
W++ LM +H + + +E + D+ +EE + + + +E+ R P +
Sbjct: 274 WSLLHLMDPRNKRHLAKLHQEIDEFPAQLNYDNVMEE-----MPFAEQCARESIRRDPPL 328
Query: 394 PLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLD--DGIASK 451
+L+ R+ + +G Y +P+ I + H+D + + NP ++ PER + DG
Sbjct: 329 VMLM-RKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLVDG---- 383
Query: 452 FDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWEL 496
+ FG+G C G + VLA++L +++EL
Sbjct: 384 --------AFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 378 YLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQ 437
Y + V+E R +P P ++ R AS+ G P+ ++L++ + D W +P +
Sbjct: 273 YAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 438 FRPERFLDDGIASKFDYSGNNFQYLPFGSGRRM----CAG--IALAERMLMFVLASLL-H 490
FRPERF + ++F ++P G G C G I LA +M V A LL +
Sbjct: 332 FRPERFR--------AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLA---IMKVAAHLLVN 380
Query: 491 SFEWELP 497
+ +++P
Sbjct: 381 AMRYDVP 387
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
V+E R + A P R A+E IGG IP+ +T+++ A +RDPK + +P
Sbjct: 278 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDP------- 329
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+FD + + +L FG G C G LA+ L +L F
Sbjct: 330 -------HRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
V+E R + A P R A+E IGG IP+ +T+++ A +RDPK + +P
Sbjct: 277 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDP------- 328
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+FD + + +L FG G C G LA+ L +L F
Sbjct: 329 -------HRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
V+E R + A P R A+E IGG IP+ +T+++ A +RDPK + +P
Sbjct: 278 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDP------- 329
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+FD + + +L FG G C G LA+ L +L F
Sbjct: 330 -------HRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
V+E R + A P R A+E IGG IP+ +T+++ A +RDPK + +P
Sbjct: 277 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDP------- 328
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+FD + + +L FG G C G LA+ L +L F
Sbjct: 329 -------HRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
V+E R + A P R A+E IGG IP+ +T+++ A +RDPK + +P
Sbjct: 278 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDP------- 329
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+FD + + +L FG G C G LA+ L +L F
Sbjct: 330 -------HRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 16/138 (11%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNI------GGYNIPKDTTIMLNVRAIHRDPKLWDN 434
+VV E+ R+ P VP P+ SN + + K + +DPK++D
Sbjct: 332 SVVYESLRIEPPVP---PQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDR 388
Query: 435 PLQFRPERFLDDGIA-SKFDYSGNNFQYLPFGSGRRMCAG---IALAERMLMFVLASLLH 490
P ++ P+RF+ DG A K+ + N + + CAG + L R+ + L
Sbjct: 389 PEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD 448
Query: 491 SFEWEL---PTGTKLNLS 505
SFE EL P G + L+
Sbjct: 449 SFEIELGESPLGAAVTLT 466
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
A+V+E R P P + R ++++ + G IP D + V + +RD D+P +F P
Sbjct: 276 AIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDP 334
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALA 477
R SG Q L FG G C G LA
Sbjct: 335 SR-----------KSGGAAQ-LSFGHGVHFCLGAPLA 359
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
V+E R + A P R A+E IGG IP+ +T+++ A +RDP + +P
Sbjct: 277 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDP------- 328
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+FD + + +L FG G C G LA+ L +L F
Sbjct: 329 -------HRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
A+V+E R P P + R ++++ + G IP D + V + +RD D+P +F P
Sbjct: 296 AIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDP 354
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALA 477
R SG Q L FG G C G LA
Sbjct: 355 SR-----------KSGGAAQ-LSFGHGVHFCLGAPLA 379
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H AV L
Sbjct: 246 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTAVAL 287
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 288 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 339
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 340 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 394
Query: 510 IV 511
IV
Sbjct: 395 IV 396
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H AV L
Sbjct: 247 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTAVAL 288
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 289 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 340
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 341 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 395
Query: 510 IV 511
IV
Sbjct: 396 IV 397
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 379 LDAVVKETFR-LHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQ 437
+D VV+E R PA+ +L R + I G ++P T ++ + A +RDP +D+P
Sbjct: 287 VDTVVEEVLRWTSPAMHVL--RVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDT 344
Query: 438 FRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASL 488
F P R +++ FG G C G ALA L VL L
Sbjct: 345 FLPGR--------------KPNRHITFGHGMHHCLGSALARIELSVVLRVL 381
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 15/113 (13%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
V+ET R + + L R A+E S I I K +++ + + +RD +D P F+
Sbjct: 220 GFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFK- 278
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFE 493
G +L FG G MC G LA L +L+ F+
Sbjct: 279 --------------IGRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 246 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTATAL 287
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 288 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 339
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 340 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 394
Query: 510 IV 511
IV
Sbjct: 395 IV 396
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 41/159 (25%)
Query: 344 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASE 403
L+QHP+ + K++E ++G V+E R + + + R ASE
Sbjct: 250 LLQHPEQLLKLREN-PDLIG-----------------TAVEECLR-YESPTQMTARVASE 290
Query: 404 SSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLP 463
+I G I + + L + A +RDP ++ NP FD + + +L
Sbjct: 291 DIDICGVTIRQGEQVYLLLGAANRDPSIFTNP--------------DVFDITRSPNPHLS 336
Query: 464 FGSGRRMCAGIALAERMLMFVLASLLH--------SFEW 494
FG G +C G +LA + +LL FEW
Sbjct: 337 FGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEW 375
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 247 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTATAL 288
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 289 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 340
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 341 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 395
Query: 510 IV 511
IV
Sbjct: 396 IV 397
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 384 KETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERF 443
+E RL+P +L RR +G +P TT++L+ R + + FRPERF
Sbjct: 259 QEALRLYPPA-WILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERF 315
Query: 444 LDDGIASKFDYSGNNFQYLPFGSGRRMCAG 473
L++ + SG +Y PFG G+R+C G
Sbjct: 316 LEE----RGTPSG---RYFPFGLGQRLCLG 338
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 246 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTASAL 287
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 288 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 339
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 340 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 394
Query: 510 IV 511
IV
Sbjct: 395 IV 396
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 246 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTASAL 287
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 288 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 339
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 340 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 394
Query: 510 IV 511
IV
Sbjct: 395 IV 396
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 247 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTASAL 288
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 289 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 340
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 341 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 395
Query: 510 IV 511
IV
Sbjct: 396 IV 397
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 246 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTASAL 287
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 288 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 339
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 340 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 394
Query: 510 IV 511
IV
Sbjct: 395 IV 396
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 246 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTASAL 287
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 288 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 339
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 340 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 394
Query: 510 IV 511
IV
Sbjct: 395 IV 396
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 246 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTASAL 287
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 288 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 339
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 340 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 394
Query: 510 IV 511
IV
Sbjct: 395 IV 396
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 247 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTASAL 288
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 289 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 340
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 341 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 395
Query: 510 IV 511
IV
Sbjct: 396 IV 397
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 336 MVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPL 395
M+ +A L QHP ++LAQ+ S +F V+E R H A L
Sbjct: 248 MIALGVATLAQHP-------DQLAQLKANPSLAPQF-----------VEELCRYHTASAL 289
Query: 396 LLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS 455
+ R A E IG + + I+ + ++ +RD ++++NP +F R K+
Sbjct: 290 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQ 341
Query: 456 GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF---EWELPTGTKLN---LSEKFG 509
L FG G C LA+ L V ++L F + +P G K+N L+ G
Sbjct: 342 DP----LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLG-KINYTPLNRDVG 396
Query: 510 IV 511
IV
Sbjct: 397 IV 398
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 18/118 (15%)
Query: 379 LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQF 438
L +V+E R V + R A+ + + G I +MLN A + DP + P +F
Sbjct: 322 LPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF 380
Query: 439 RPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAE---RMLMFVLASLLHSFE 493
P R + ++L FG+G C G+ LA R+L+ VL + S E
Sbjct: 381 DPTRPAN--------------RHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLE 424
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 384 KETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERF 443
+E RL+P +L RR +G +P+ TT++L+ R + F+PERF
Sbjct: 259 QEALRLYPPA-WILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERF 315
Query: 444 LDDGIASKFDYSGNNFQYLPFGSGRRMCAG 473
L A + SG +Y PFG G+R+C G
Sbjct: 316 L----AERGTPSG---RYFPFGLGQRLCLG 338
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 32/149 (21%)
Query: 341 MAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRR 400
M L+ HP + ++ A + +D VEE L Y V T+R P P+
Sbjct: 276 MYALLSHPDQLAALR---ADMTLLDGAVEEM----LRYEGPVESATYRF-PVEPV----- 322
Query: 401 ASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQ 460
++ G IP T+++ + HR P ERF D +FD +
Sbjct: 323 -----DLDGTVIPAGDTVLVVLADAHRTP-----------ERFPD---PHRFDIRRDTAG 363
Query: 461 YLPFGSGRRMCAGIALAERMLMFVLASLL 489
+L FG G C G LA + +LL
Sbjct: 364 HLAFGHGIHFCIGAPLARLEARIAVRALL 392
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 339 WTMAELMQHPQVMKKVQEELA-------QVVGMDSCVEEFHLSRLMYLDAVVKETFRLHP 391
W + L+++P+ + V+ EL Q V + + + L LD+V+ E+ RL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA 343
Query: 392 A--------VPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERF 443
A V L +P N+ D ++ + RDP+++ +P F+ RF
Sbjct: 344 APFITREVVVDLAMPMADGREFNLRR----GDRLLLFPFLSPQRDPEIYTDPEVFKYNRF 399
Query: 444 LDDGIASKFDYSGNNFQY----LPFGSGRRMCAGIALA-ERMLMFVLASLLH 490
L+ + K D+ + + +P+G+G C G + A + FV L+H
Sbjct: 400 LNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVH 451
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 32/149 (21%)
Query: 341 MAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRR 400
M L+ HP + ++ A + +D VEE L Y V T+R P P+
Sbjct: 276 MYALLSHPDQLAALR---ADMTLLDGAVEEM----LRYEGPVESATYRF-PVEPV----- 322
Query: 401 ASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQ 460
++ G IP T+++ + HR P ERF D +FD +
Sbjct: 323 -----DLDGTVIPAGDTVLVVLADAHRTP-----------ERFPD---PHRFDIRRDTAG 363
Query: 461 YLPFGSGRRMCAGIALAERMLMFVLASLL 489
+L FG G C G LA + +LL
Sbjct: 364 HLAFGHGIHFCIGAPLARLEARIAVRALL 392
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 32/149 (21%)
Query: 341 MAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRR 400
M L+ HP + ++ A + +D VEE L Y V T+R P P+
Sbjct: 276 MYALLSHPDQLAALR---ADMTLLDGAVEEM----LRYEGPVESATYRF-PVEPV----- 322
Query: 401 ASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQ 460
++ G IP T+++ + HR P ERF D +FD +
Sbjct: 323 -----DLDGTVIPAGDTVLVVLADAHRTP-----------ERFPD---PHRFDIRRDTAG 363
Query: 461 YLPFGSGRRMCAGIALAERMLMFVLASLL 489
+L FG G C G LA + +LL
Sbjct: 364 HLAFGHGIHFCIGAPLARLEARIAVRALL 392
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 339 WTMAELMQHPQVMKKVQEELA-------QVVGMDSCVEEFHLSRLMYLDAVVKETFRLHP 391
W + L+++P+ + V+ EL Q V + + + L LD+V+ E+ RL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA 331
Query: 392 A--------VPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERF 443
A V L +P N+ D ++ + RDP+++ +P F+ RF
Sbjct: 332 APFITREVVVDLAMPMADGREFNLRR----GDRLLLFPFLSPQRDPEIYTDPEVFKYNRF 387
Query: 444 LDDGIASKFDYSGNNFQY----LPFGSGRRMCAGIALA-ERMLMFVLASLLH 490
L+ + K D+ + + +P+G+G C G + A + FV L+H
Sbjct: 388 LNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVH 439
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 33/146 (22%)
Query: 344 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASE 403
L+QHP+ + + + V G+ VEE L+ +V R+ A E
Sbjct: 259 LIQHPEQIDVLLRDPGAVSGV---VEE-----LLRFTSVSDHIVRM-----------AKE 299
Query: 404 SSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLP 463
+GG I +++++ ++RD K ++NP FD N ++
Sbjct: 300 DIEVGGATIKAGDAVLVSITLMNRDAKAYENP--------------DIFDARRNARHHVG 345
Query: 464 FGSGRRMCAGIALAERMLMFVLASLL 489
FG G C G LA L L L
Sbjct: 346 FGHGIHQCLGQNLARAELEIALGGLF 371
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R + + G I + +++ + + +RDP+ WD+P ++D +
Sbjct: 303 RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDP--------------DRYDITRKT 348
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASL 488
++ FGSG MC G +A VLA+L
Sbjct: 349 SGHVGFGSGVHMCVGQLVARLEGEVVLAAL 378
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
Query: 379 LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQF 438
+ A V E R+ + R A+E + G +P D ++ + + DP+ +D+P
Sbjct: 282 MPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDP--- 338
Query: 439 RPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
+ D+ + ++ FG G C G LA L L +LL
Sbjct: 339 -----------ERVDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLL 378
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R A + + G NI + IML+ + +RD +++ NP +F RF +
Sbjct: 319 RTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN------------- 365
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
++L FG G MC G LA+ + LL
Sbjct: 366 -RHLGFGWGAHMCLGQHLAKLEMKIFFEELL 395
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
A++ E R+ P L R +E IGG I + I + A +RDP+++D+P F
Sbjct: 268 AIINEMVRMDPPQLSFL-RFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAG--IALAERMLMF-VLASLLHSFEW-EL 496
R AS+ L FG G CAG I+ AE +F VLA E E
Sbjct: 327 TR---PPAASR---------NLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE 374
Query: 497 PTGTKLNLSEKFGIVIKKKEPLV 519
PT + + ++ +K P+V
Sbjct: 375 PTVAHNDFARRY-----RKLPIV 392
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
AVV+ET R +L R A+E +G IP ++++ A+ RD +
Sbjct: 277 AVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGP------ 330
Query: 441 ERFLDDGIASKFDY---SGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
A +FD SGN +++ FG G +C G AL+ L +L F
Sbjct: 331 -------TADRFDLTRTSGN--RHISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
A++ E R+ P L R +E IGG I + I + A +RDP+++D+P F
Sbjct: 266 AIINEMVRMDPPQLSFL-RFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAG--IALAERMLMF-VLASLLHSFEW-EL 496
R AS+ L FG G CAG I+ AE +F VLA E E
Sbjct: 325 TR---PPAASR---------NLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE 372
Query: 497 PTGTKLNLSEKFGIVIKKKEPLV 519
PT + + ++ +K P+V
Sbjct: 373 PTVAHNDFARRY-----RKLPIV 390
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 382 VVKETFRLHPAVPLLLPRRA-SESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
VV+ET R PAV L R A ++ + G I + I+ + A +R P ++
Sbjct: 278 VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHED------ 331
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
A FD + ++L FG G C G LA + L SL F
Sbjct: 332 --------ADTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 366 SCVEEFHLSRLMY-----LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIML 420
S ++ L L++ + A V+E R++ A LPR A+ +G + K +++
Sbjct: 248 SLIQRPQLRNLLHEKPELIPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 421 NVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERM 480
+ + DP+ + NP +R N +L FG G+ C G AL R
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR-------------PNPTSHLAFGRGQHFCPGSALGRRH 354
Query: 481 LMFVLASLL 489
+ +LL
Sbjct: 355 AQIGIEALL 363
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 398 PRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGN 457
PR A E + G I K +++ ++ A +RDP L + + D +
Sbjct: 288 PRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPD--------------VDRLDVTRE 333
Query: 458 NFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
++ FG G C G ALA L V L F
Sbjct: 334 PIPHVAFGHGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 22/174 (12%)
Query: 349 QVMKKVQEELAQVVGMDS------CVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRAS 402
QV ++ EE+ V+ + +E+ L++ +VV E R P V R
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTK-----SVVYECLRFEPPVTAQYGRAKK 370
Query: 403 E---SSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS--GN 457
+ S+ + + + RDPK++D +F PERF+ + + N
Sbjct: 371 DLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSN 430
Query: 458 NFQYLPFGSGRRMCAG---IALAERMLMFVLASLLHSFEWEL---PTGTKLNLS 505
+ G + CAG + L R+ + + SF+ E+ P G+ +N S
Sbjct: 431 GPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFS 484
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 22/174 (12%)
Query: 349 QVMKKVQEELAQVVGMDS------CVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRAS 402
QV ++ EE+ V+ + +E+ L++ +VV E R P V R
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTK-----SVVYECLRFEPPVTAQYGRAKK 370
Query: 403 E---SSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS--GN 457
+ S+ + + + RDPK++D +F PERF+ + + N
Sbjct: 371 DLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSN 430
Query: 458 NFQYLPFGSGRRMCAG---IALAERMLMFVLASLLHSFEWEL---PTGTKLNLS 505
+ G + CAG + L R+ + + SF+ E+ P G+ +N S
Sbjct: 431 GPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFS 484
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 379 LDAVVKETFRLHPAVPLLLPRR-ASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQ 437
++ +V E R PL RR A S +GG I K +++ + +RD ++ D
Sbjct: 298 VETMVPEIIRWQ--TPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVID---- 351
Query: 438 FRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
RPE F+ D + Q+L FG G C G LAE L + +L F
Sbjct: 352 -RPEEFIIDRPRPR--------QHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 366 SCVEEFHLSRLMY-----LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIML 420
S ++ L L++ + A V+E R++ + LPR A+ +G + K +++
Sbjct: 248 SLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 421 NVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERM 480
+ + DP+ + NP +R N +L FG G+ C G AL R
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR-------------PNPTSHLAFGRGQHFCPGSALGRRH 354
Query: 481 LMFVLASLL 489
+ +LL
Sbjct: 355 AQIGIEALL 363
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 366 SCVEEFHLSRLMY-----LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIML 420
S ++ L L++ + A V+E R++ + LPR A+ +G + K +++
Sbjct: 248 SLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 421 NVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERM 480
+ + DP+ + NP +R N +L FG G+ C G AL R
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR-------------PNPTSHLAFGRGQHFCPGSALGRRH 354
Query: 481 LMFVLASLL 489
+ +LL
Sbjct: 355 AQIGIEALL 363
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 366 SCVEEFHLSRLMY-----LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIML 420
S ++ L L++ + A V+E R++ + LPR A+ +G + K +++
Sbjct: 248 SLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 421 NVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERM 480
+ + DP+ + NP +R N +L FG G+ C G AL R
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR-------------PNPTSHLAFGRGQHFCPGSALGRRH 354
Query: 481 LMFVLASLL 489
+ +LL
Sbjct: 355 AQIGIEALL 363
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 366 SCVEEFHLSRLMY-----LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIML 420
S ++ L L++ + A V+E R++ + LPR A+ +G + K +++
Sbjct: 247 SLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 306
Query: 421 NVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERM 480
+ + DP+ + NP +R N +L FG G+ C G AL R
Sbjct: 307 LLEGANFDPEHFPNPGSIELDR-------------PNPTSHLAFGRGQHFCPGSALGRRH 353
Query: 481 LMFVLASLL 489
+ +LL
Sbjct: 354 AQIGIEALL 362
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 366 SCVEEFHLSRLMY-----LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIML 420
S ++ L L++ + A V+E R++ + LPR A+ +G + K +++
Sbjct: 248 SLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 421 NVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERM 480
+ + DP+ + NP +R N +L FG G+ C G AL R
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR-------------PNPTSHLAFGRGQHFCPGSALGRRH 354
Query: 481 LMFVLASLL 489
+ +LL
Sbjct: 355 AQIGIEALL 363
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 366 SCVEEFHLSRLMY-----LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIML 420
S ++ L L++ + A V+E R++ + LPR A+ +G + K +++
Sbjct: 248 SLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 421 NVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERM 480
+ + DP+ + NP +R N +L FG G+ C G AL R
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR-------------PNPTSHLAFGRGQHFCLGSALGRRH 354
Query: 481 LMFVLASLL 489
+ +LL
Sbjct: 355 AQIGIEALL 363
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R A+ +GG I K ++ +V A DP + P +FD +
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEP--------------ERFDITRRP 335
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
+L FG G C G LA L V +L
Sbjct: 336 APHLAFGFGAHQCIGQQLARIELQIVFETLF 366
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R A+ +GG I K ++ +V A DP + P +FD +
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEP--------------ERFDITRRP 335
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
+L FG G C G LA L V +L
Sbjct: 336 APHLAFGFGAHQCIGQQLARIELQIVFETLF 366
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R A+ +GG I K ++ +V A DP + P +FD +
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEP--------------ERFDITRRP 335
Query: 459 FQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
+L FG G C G LA L V +L
Sbjct: 336 APHLAFGFGAHQCIGQQLARIELQIVFETLF 366
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 377 MYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPL 436
+YL A+ +E R P V + R+ E +G I + + + + + +RD +++ +
Sbjct: 239 LYLKAI-EEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGE 296
Query: 437 QFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALA 477
+F P+R N +L FGSG +C G LA
Sbjct: 297 KFIPDR--------------NPNPHLSFGSGIHLCLGAPLA 323
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 377 MYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPL 436
+YL A+ +E R P V + R+ E +G I + + + + + +RD +++ +
Sbjct: 239 LYLKAI-EEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGE 296
Query: 437 QFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALA 477
+F P+R N +L FGSG +C G LA
Sbjct: 297 KFIPDR--------------NPNPHLSFGSGIHLCLGAPLA 323
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 399 RRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN 458
R + +GG I + +++ + + +RDP+ W +P +D +
Sbjct: 301 RTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDP--------------DLYDITRKT 346
Query: 459 FQYLPFGSGRRMCAGIALAE---RMLMFVLASLLHSFEWELPTGTKLN 503
++ FGSG MC G +A +++ LA + + + + P + N
Sbjct: 347 SGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFN 394
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 18/129 (13%)
Query: 366 SCVEEFHLSRLMY-----LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIML 420
S ++ L L++ + A V+E R++ + LPR A+ +G + K +++
Sbjct: 248 SLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 421 NVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERM 480
+ + DP+ + NP +R N +L G G+ C G AL R
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR-------------PNPTSHLAHGRGQHFCPGSALGRRH 354
Query: 481 LMFVLASLL 489
+ +LL
Sbjct: 355 AQIGIEALL 363
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 20/135 (14%)
Query: 373 LSRLMYLDAVVKETFRLHP-AVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKL 431
L R + + V+E R P V +PR A E + G I ++ + A +RD
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 432 WDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHS 491
+ + A + D Q+L FG G C G LA L L LL
Sbjct: 341 FPD--------------ADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQ- 385
Query: 492 FEWELPTGTKLNLSE 506
LP G +L + E
Sbjct: 386 ---RLP-GIRLGIPE 396
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 50/135 (37%), Gaps = 20/135 (14%)
Query: 373 LSRLMYLDAVVKETFRLHP-AVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKL 431
L R + + V+E R P V PR A E + G I ++ + A +RD
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 432 WDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHS 491
+ + A + D Q+L FG G C G LA L L LL
Sbjct: 341 FPD--------------ADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQ- 385
Query: 492 FEWELPTGTKLNLSE 506
LP G +L + E
Sbjct: 386 ---RLP-GIRLGIPE 396
>pdb|1G28|A Chain A, Structure Of A Flavin-Binding Domain, Lov2, From The
Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3
pdb|1G28|B Chain B, Structure Of A Flavin-Binding Domain, Lov2, From The
Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3
pdb|1G28|C Chain C, Structure Of A Flavin-Binding Domain, Lov2, From The
Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3
pdb|1G28|D Chain D, Structure Of A Flavin-Binding Domain, Lov2, From The
Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3
pdb|1JNU|A Chain A, Photoexcited Structure Of The Plant Photoreceptor Domain,
Phy3 Lov2
pdb|1JNU|B Chain B, Photoexcited Structure Of The Plant Photoreceptor Domain,
Phy3 Lov2
pdb|1JNU|C Chain C, Photoexcited Structure Of The Plant Photoreceptor Domain,
Phy3 Lov2
pdb|1JNU|D Chain D, Photoexcited Structure Of The Plant Photoreceptor Domain,
Phy3 Lov2
Length = 104
Score = 32.0 bits (71), Expect = 0.93, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 428 DPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYL 462
DP+L DNP+ F +RFL+ ++ + GNN ++L
Sbjct: 7 DPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFL 41
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 32/134 (23%)
Query: 344 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASE 403
L+ HP K + E+ + + S VEEF + D+ V + P+ R +E
Sbjct: 252 LLTHPDQRKLLAEDPSLI---SSAVEEF-----LRFDSPVSQ-------API---RFTAE 293
Query: 404 SSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLP 463
G IP +ML + A +RD P D + D SG F
Sbjct: 294 DVTYSGVTIPAGEMVMLGLAAANRDADWMPEP----------DRLDITRDASGGVF---- 339
Query: 464 FGSGRRMCAGIALA 477
FG G C G LA
Sbjct: 340 FGHGIHFCLGAQLA 353
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
V+E R + R A+E IGG +I +++++ + + DP ++ +P
Sbjct: 282 VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDP------- 334
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
+ D +L FG G C G LA L V +L
Sbjct: 335 -------AVLDVERGARHHLAFGFGPHQCLGQNLARMELQIVFDTLF 374
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 32/134 (23%)
Query: 344 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASE 403
L+ HP K + E+ + + S VEEF + D+ V + P+ R +E
Sbjct: 252 LLTHPDQRKLLAEDPSLI---SSAVEEF-----LRFDSPVSQ-------API---RFTAE 293
Query: 404 SSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLP 463
G IP +ML + A +RD P D + D SG F
Sbjct: 294 DVTYSGVTIPAGEMVMLGLAAANRDADWMPEP----------DRLDITRDASGGVF---- 339
Query: 464 FGSGRRMCAGIALA 477
FG G C G LA
Sbjct: 340 FGHGIHFCLGAQLA 353
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 50/135 (37%), Gaps = 20/135 (14%)
Query: 373 LSRLMYLDAVVKETFRLHP-AVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKL 431
L R + + V+E R P V PR A E + G I ++ + A +RD
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 432 WDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHS 491
+ + A + D Q+L FG G C G LA L L LL
Sbjct: 341 FPD--------------ADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQ- 385
Query: 492 FEWELPTGTKLNLSE 506
LP G +L + E
Sbjct: 386 ---RLP-GIRLGIPE 396
>pdb|3BN6|A Chain A, Crystal Structure Of The C2 Domain Of Bovine Lactadherin
At 1.67 Angstrom Resolution
Length = 158
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 6/102 (5%)
Query: 48 GLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTF 107
GL F + P+ D KF + + WL L +I Q RD F
Sbjct: 27 GLSAFSWFPYYARLDNQGKFNAWTAQTNSASE-WLQIDLGSQKRVTGIITQGARD----F 81
Query: 108 ANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNN 149
+ AA V+YG + + W+ Y K F G M NN
Sbjct: 82 GHIQY-VAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNN 122
>pdb|2PQS|A Chain A, Crystal Structure Of The Bovine Lactadherin C2 Domain
pdb|2PQS|B Chain B, Crystal Structure Of The Bovine Lactadherin C2 Domain
pdb|2PQS|C Chain C, Crystal Structure Of The Bovine Lactadherin C2 Domain
pdb|2PQS|D Chain D, Crystal Structure Of The Bovine Lactadherin C2 Domain
Length = 159
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 6/102 (5%)
Query: 48 GLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTF 107
GL F + P+ D KF + + WL L +I Q RD F
Sbjct: 28 GLSAFSWFPYYARLDNQGKFNAWTAQTNSASE-WLQIDLGSQKRVTGIITQGARD----F 82
Query: 108 ANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNN 149
+ AA V+YG + + W+ Y K F G M NN
Sbjct: 83 GHIQY-VAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNN 123
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 397 LPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSG 456
L R A E + G I + ++ A +RDP ++ +P + D
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDP--------------DRIDLDR 341
Query: 457 NNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF 492
+ +L +G+G C G LA ++ +LL
Sbjct: 342 DPNPHLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 14/93 (15%)
Query: 397 LPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSG 456
L R A E + G I + ++ A +RDP ++ +P + D
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDP--------------DRIDLDR 341
Query: 457 NNFQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
+ +L +G+G C G LA ++ +LL
Sbjct: 342 DPNPHLAYGNGHHFCTGAVLARMQTELLVDTLL 374
>pdb|3B0Z|B Chain B, Crystal Structure Of Cytoplasmic Domain Of Flhb From
Salmonella Typhimurium
Length = 114
Score = 30.0 bits (66), Expect = 3.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 21 SVLAVVYFAWNVKKSRKANATLPPGPRGLPVFGYLPFL 58
+V V+ + W +K+ R A PP P LPV L F+
Sbjct: 70 AVAEVLAWVWQLKRWRLAGGQRPPQPENLPVPEALDFM 107
>pdb|3LIC|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Putative Histidine Kinase Sohk1s-Z6
Length = 274
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 411 NIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDY-SGNNFQYLPFGS 466
N P+ +L R I R+P + + + F+P F + + S + Y SG+ F YL G+
Sbjct: 53 NNPEKLKTVLTNR-IQRNPDFFGSAIAFKPNTFPNKKLFSPYVYRSGSGFNYLDIGA 108
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 383 VKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPER 442
V+E R P V + R E I I + + + + + +RD +++ +P F P+R
Sbjct: 244 VEEALRFSPPV-MRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR 302
Query: 443 FLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALA 477
+ +L FGSG +C G LA
Sbjct: 303 TPN--------------PHLSFGSGIHLCLGAPLA 323
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 15/109 (13%)
Query: 381 AVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRP 440
A V+E R P V + R A E +G ++IP+ + ++ + + +RDP + +P
Sbjct: 289 AAVEELMRYDPPVQAVT-RWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDP----- 342
Query: 441 ERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLL 489
D + + FG G C G LA L +LL
Sbjct: 343 ---------DVLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 18/115 (15%)
Query: 395 LLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDY 454
+L PR ASE GG I ++ ++ + D + + P +FD
Sbjct: 291 VLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGP--------------EEFDA 336
Query: 455 SGNNFQYLPFGSGRRMCAGIALAE---RMLMFVLASLLHSFEWELPTGTKLNLSE 506
+ +L FG G C G LA R + L + L ELP +L L E
Sbjct: 337 ARTPNPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPV-EQLRLKE 390
>pdb|3AF5|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404
From Pyrococcus Horikoshii
pdb|3AF6|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404
From Pyrococcus Horikoshii Complexed With Rna-Analog
Length = 651
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
Query: 349 QVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIG 408
Q + V EE A++ G++ + YLD ++ E +H A P L RR E
Sbjct: 437 QEVMMVLEEYARIGGIEVPI---------YLDGMIWEATAIHTAYPEYLSRRLREQIFKE 487
Query: 409 GYN 411
GYN
Sbjct: 488 GYN 490
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,243,222
Number of Sequences: 62578
Number of extensions: 624009
Number of successful extensions: 1782
Number of sequences better than 100.0: 187
Number of HSP's better than 100.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1384
Number of HSP's gapped (non-prelim): 270
length of query: 533
length of database: 14,973,337
effective HSP length: 103
effective length of query: 430
effective length of database: 8,527,803
effective search space: 3666955290
effective search space used: 3666955290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)