Query         009492
Match_columns 533
No_of_seqs    165 out of 1849
Neff          11.1
Searched_HMMs 46136
Date          Thu Mar 28 13:46:31 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009492.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009492hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 7.9E-85 1.7E-89  628.1  48.7  459   40-526    25-488 (489)
  2 PLN02687 flavonoid 3'-monooxyg 100.0 9.9E-79 2.2E-83  608.9  49.9  497   14-528     7-511 (517)
  3 PLN02971 tryptophan N-hydroxyl 100.0   1E-78 2.2E-83  610.5  48.6  476   41-532    57-539 (543)
  4 PLN03234 cytochrome P450 83B1; 100.0 6.7E-78 1.5E-82  602.6  48.7  464   41-525    28-498 (499)
  5 KOG0158 Cytochrome P450 CYP3/C 100.0 3.7E-78 7.9E-83  571.9  40.9  467   24-526    15-499 (499)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 3.8E-77 8.3E-82  593.6  49.6  468   41-529    31-500 (504)
  7 PLN03112 cytochrome P450 famil 100.0 7.8E-77 1.7E-81  596.6  48.8  480   33-526    24-508 (514)
  8 PLN02183 ferulate 5-hydroxylas 100.0   1E-76 2.2E-81  594.3  46.9  464   41-525    36-511 (516)
  9 PLN00168 Cytochrome P450; Prov 100.0 9.5E-76   2E-80  587.7  50.5  481   39-527    33-518 (519)
 10 PLN02394 trans-cinnamate 4-mon 100.0 1.6E-75 3.5E-80  586.0  50.3  467   42-526    31-502 (503)
 11 PTZ00404 cytochrome P450; Prov 100.0 1.3E-75 2.8E-80  583.5  44.3  455   37-525    25-482 (482)
 12 PLN02966 cytochrome P450 83A1  100.0 2.6E-75 5.7E-80  582.7  45.7  465   39-528    27-500 (502)
 13 PLN02655 ent-kaurene oxidase   100.0 7.1E-74 1.5E-78  566.9  46.9  458   43-527     1-465 (466)
 14 PLN03018 homomethionine N-hydr 100.0 1.6E-72 3.5E-77  560.9  50.3  478   41-532    40-529 (534)
 15 PLN02290 cytokinin trans-hydro 100.0 2.9E-73 6.2E-78  571.1  42.2  453   42-526    43-515 (516)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 1.7E-73 3.6E-78  562.2  39.5  456   40-527    34-497 (497)
 17 KOG0159 Cytochrome P450 CYP11/ 100.0 6.2E-73 1.3E-77  522.7  38.4  457   42-527    51-519 (519)
 18 PLN02500 cytochrome P450 90B1  100.0 7.3E-73 1.6E-77  563.9  41.9  444   37-525    34-489 (490)
 19 KOG0684 Cytochrome P450 [Secon 100.0 5.8E-72 1.3E-76  502.8  37.5  447   42-526    32-485 (486)
 20 PLN02774 brassinosteroid-6-oxi 100.0 1.7E-71 3.7E-76  549.5  42.0  429   40-524    30-462 (463)
 21 PLN02196 abscisic acid 8'-hydr 100.0 2.9E-71 6.4E-76  547.3  41.6  428   39-526    33-463 (463)
 22 PF00067 p450:  Cytochrome P450 100.0 2.5E-72 5.4E-77  563.1  34.3  456   43-522     1-463 (463)
 23 PLN02738 carotene beta-ring hy 100.0 2.5E-70 5.5E-75  550.6  44.4  452   53-527   143-596 (633)
 24 PLN03195 fatty acid omega-hydr 100.0   9E-70 1.9E-74  545.3  44.1  460   42-526    31-516 (516)
 25 PLN02169 fatty acid (omega-1)- 100.0   1E-69 2.2E-74  539.1  44.0  452   42-525    32-499 (500)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 3.4E-69 7.5E-74  531.9  41.7  437   40-527     6-451 (452)
 27 PLN02987 Cytochrome P450, fami 100.0   1E-68 2.3E-73  526.8  43.7  450   23-526    13-469 (472)
 28 PLN02302 ent-kaurenoic acid ox 100.0 5.5E-68 1.2E-72  531.6  45.6  440   38-527    39-489 (490)
 29 PLN02936 epsilon-ring hydroxyl 100.0 2.2E-67 4.8E-72  522.8  41.4  458   42-525    13-481 (489)
 30 PLN02426 cytochrome P450, fami 100.0 6.1E-65 1.3E-69  504.0  44.4  439   49-526    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 1.2E-58 2.5E-63  451.5  31.6  415   42-499    18-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 5.7E-54 1.2E-58  414.2  32.4  383   63-525    24-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  74.1      11 0.00023   23.6   4.4   43  317-359     6-48  (48)
 34 PF09201 SRX:  SRX;  InterPro:   66.4     5.4 0.00012   31.1   2.4   23  469-491    18-40  (148)
 35 PF12508 DUF3714:  Protein of u  64.4     1.8 3.8E-05   37.0  -0.6   44  375-421    51-95  (200)
 36 PF08492 SRP72:  SRP72 RNA-bind  63.7     5.4 0.00012   26.2   1.7    9  438-446    43-51  (59)
 37 PF05952 ComX:  Bacillus compet  43.9      23  0.0005   23.1   2.2   22  340-361     5-26  (57)
 38 TIGR03779 Bac_Flav_CT_M Bacter  42.4     5.4 0.00012   38.2  -1.2   44  375-421   254-298 (410)
 39 PF07886 BA14K:  BA14K-like pro  39.9      27 0.00059   19.5   1.8   16  457-472    16-31  (31)
 40 PF15300 INT_SG_DDX_CT_C:  INTS  35.3      41  0.0009   22.7   2.4   16  375-390    39-54  (65)
 41 PRK06789 flagellar motor switc  33.9      40 0.00086   23.5   2.2   41  382-422    21-63  (74)
 42 COG2101 SPT15 TATA-box binding  33.4      16 0.00034   30.1   0.3   36  436-475    35-70  (185)
 43 PF05393 Hum_adeno_E3A:  Human   32.4 1.2E+02  0.0025   21.8   4.3    7   47-53     65-71  (94)
 44 KOG3506 40S ribosomal protein   31.8      22 0.00047   22.7   0.6   10  462-471    12-21  (56)
 45 PF13625 Helicase_C_3:  Helicas  30.8 1.1E+02  0.0025   24.0   4.8   42   61-104    74-115 (129)
 46 COG0851 MinE Septum formation   28.6      89  0.0019   22.5   3.3   19  347-365    35-53  (88)
 47 PF10264 Stork_head:  Winged he  27.8 2.3E+02  0.0049   20.2   5.1   40  334-373    13-54  (80)
 48 PF14550 Peptidase_U35_2:  Puta  25.8      52  0.0011   25.6   1.9   23  399-421    71-93  (122)
 49 PF08776 VASP_tetra:  VASP tetr  24.9 1.2E+02  0.0025   18.1   2.7   29  348-389    10-38  (40)
 50 PRK02302 hypothetical protein;  24.6 1.8E+02  0.0038   21.2   4.2   34   69-102    21-54  (89)
 51 COG1759 5-formaminoimidazole-4  24.0 1.2E+02  0.0025   28.2   4.0   69  380-485   276-351 (361)
 52 PF14316 DUF4381:  Domain of un  23.6      91   0.002   25.3   3.1   22   12-33     22-43  (146)
 53 PRK02886 hypothetical protein;  22.2 2.1E+02  0.0046   20.7   4.2   34   69-102    19-52  (87)
 54 PF14483 Cut8_M:  Cut8 dimerisa  22.0 1.9E+02   0.004   17.2   3.5   13  344-356    23-35  (38)
 55 PF09551 Spore_II_R:  Stage II   21.9 1.9E+02  0.0042   22.9   4.3   44  374-417    52-98  (130)
 56 PF13893 RRM_5:  RNA recognitio  21.7 2.2E+02  0.0047   18.0   4.2   35   68-102     2-40  (56)
 57 PF14129 DUF4296:  Domain of un  21.6 3.2E+02  0.0069   19.7   6.1   50  313-362    29-78  (87)
 58 PF11138 DUF2911:  Protein of u  20.3      92   0.002   25.2   2.4   24  400-423    51-74  (145)
 59 PF08138 Sex_peptide:  Sex pept  20.1      56  0.0012   20.8   0.9   26   22-47     12-37  (56)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.9e-85  Score=628.10  Aligned_cols=459  Identities=43%  Similarity=0.794  Sum_probs=399.8

Q ss_pred             CCCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCc-hhhhhH
Q 009492           40 ATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDP-PKAALV  118 (533)
Q Consensus        40 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~-~~~~~~  118 (533)
                      .++||||+++|++||++++....+|+.+.+|.++|||||++++|..++|||+|++.++|++++++..|++|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            4499999999999999999544599999999999999999999999999999999999999999999999997 334466


Q ss_pred             hhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHH
Q 009492          119 VSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNM  198 (533)
Q Consensus       119 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~  198 (533)
                      ..+++.+++++..|+.|+.+||+....+++.+.++.......+++..+++.+.+ .. .+.+||+...+..++.++|+++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~-~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK-KGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC-CCceeeHHHHHHHHHHHHHHHH
Confidence            677889999998999999999999999999999999998889999999999987 22 2389999999999999999999


Q ss_pred             HhcchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccc-cccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009492          199 LWGEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFP-MLSWLD-IQGIERRAKKISLWLDNVINSTVEQHRNK  274 (533)
Q Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  274 (533)
                      +||.++...  +.   .....+.  +.......+...+.+++| ++.+++ ..+..++.......+..+++..++++++.
T Consensus       183 ~fG~rf~~~--~~---~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~  257 (489)
T KOG0156|consen  183 LFGRRFEEE--DE---EEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK  257 (489)
T ss_pred             HhCCccccC--Cc---hHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999875  21   1112222  666677777888888999 566664 23566777777777899999999888765


Q ss_pred             hcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHH
Q 009492          275 ELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKV  354 (533)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~l  354 (533)
                      .  .           .+...|+++.|++..+++.... +++++|.+.+..+++||+|||++|+.|++.+|+.||++|+|+
T Consensus       258 ~--~-----------~~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~  323 (489)
T KOG0156|consen  258 I--G-----------DEEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKL  323 (489)
T ss_pred             h--c-----------cCCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHH
Confidence            3  1           1122899999999876543233 999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCC
Q 009492          355 QEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDN  434 (533)
Q Consensus       355 r~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~d  434 (533)
                      ++||+++++.++.++..|+.+||||+|||+||+|++|++|..++|.+.+|+.++||.|||||.|+++.+++|+||++|+|
T Consensus       324 qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~d  403 (489)
T KOG0156|consen  324 QEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWED  403 (489)
T ss_pred             HHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCC
Confidence            99999999988779999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeec
Q 009492          435 PLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKK  514 (533)
Q Consensus       435 p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  514 (533)
                      |++|+||||++++     +.......++|||.|+|+|||..+|++|+.++++.||++|||+++.+ .+++.+. +++...
T Consensus       404 P~eF~PERFl~~~-----d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~  476 (489)
T KOG0156|consen  404 PEEFKPERFLDSN-----DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKK  476 (489)
T ss_pred             ccccChhhhcCCc-----cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceec
Confidence            9999999999762     12235668999999999999999999999999999999999999987 6677666 477778


Q ss_pred             CCCeeEeeeecC
Q 009492          515 KEPLVAIPTPRL  526 (533)
Q Consensus       515 ~~~~~~~~~~r~  526 (533)
                      +.|+.+...+|.
T Consensus       477 ~~pl~~~~~~r~  488 (489)
T KOG0156|consen  477 KKPLKAVPVPRL  488 (489)
T ss_pred             CCcceeeeecCC
Confidence            889999988875


No 2  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=9.9e-79  Score=608.94  Aligned_cols=497  Identities=39%  Similarity=0.717  Sum_probs=389.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCH
Q 009492           14 AIITCLVSVLAVVYFAWNVKKSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSP   93 (533)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp   93 (533)
                      .++.++++++++++++|...+.+++..+.||||+++|++|++..+ ..+++.++.+|.++||+||++++|++++++|+||
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p   85 (517)
T PLN02687          7 LLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASA   85 (517)
T ss_pred             HHHHHHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCH
Confidence            344444545566666666555555555589999999999999877 4568999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCcccCCCCchhhhhHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhh
Q 009492           94 SLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNN  173 (533)
Q Consensus        94 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~  173 (533)
                      +++++++.++...|..++...........+.+++++.+|+.|+++||.+..++|+.+.++.+.+.+.+++..+++.+...
T Consensus        86 ~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~  165 (517)
T PLN02687         86 SVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ  165 (517)
T ss_pred             HHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence            99999999877778776654333223333456677778999999999997578999999999999999999999999764


Q ss_pred             cccCCCccchhhhHHHHHHHHHHHHHhcchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccccccccchhhHHH
Q 009492          174 DNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLSWLDIQGIER  251 (533)
Q Consensus       174 ~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~  251 (533)
                      .  +++++|+.+.+..+++|+++.++||.++...+...    ....+.  +...+.......+...+|++.++...+..+
T Consensus       166 ~--~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~  239 (517)
T PLN02687        166 H--GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDE----KAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVG  239 (517)
T ss_pred             c--CCCceeHHHHHHHHHHHHHHHHHhCccccccCCcc----hHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHH
Confidence            2  45689999999999999999999999875431111    111222  333333222222334566555443222234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCC---CCCCCCCHHHHHHHHHHHHHh
Q 009492          252 RAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRNKNFLQLLLELQEND---DSASSISMNQFKAVLADIITS  328 (533)
Q Consensus       252 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~A  328 (533)
                      +..+..+.+.+++...++++++.....           .....|+++.+++...+.   ..+..++++++.+++.++++|
T Consensus       240 ~~~~~~~~~~~~~~~~i~~r~~~~~~~-----------~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~A  308 (517)
T PLN02687        240 KMKRLHRRFDAMMNGIIEEHKAAGQTG-----------SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTA  308 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccc-----------CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhcc
Confidence            555667777788888887776543110           123569999999865431   123469999999999999999


Q ss_pred             ccchhhHhHHHHHHHHhhChHHHHHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccC
Q 009492          329 GTDTTTTMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIG  408 (533)
Q Consensus       329 G~~tta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~  408 (533)
                      |+|||+.+++|++++|++||++|+|+++|++++.+.+..++.+++++||||+|||+||||++|+++..++|.+.+|++++
T Consensus       309 G~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~  388 (517)
T PLN02687        309 GTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEIN  388 (517)
T ss_pred             ccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeEC
Confidence            99999999999999999999999999999999988767789999999999999999999999999987789999999999


Q ss_pred             CeeeCCCCEEEEcchhhhcCCCCCCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 009492          409 GYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASL  488 (533)
Q Consensus       409 g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~l  488 (533)
                      ||.||+||.|.++++++|+||++|+||++|+||||++++..........+..|+|||+|+|.|+|++||++|+++++++|
T Consensus       389 g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~l  468 (517)
T PLN02687        389 GYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATL  468 (517)
T ss_pred             CEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999964211111112245689999999999999999999999999999


Q ss_pred             HHhceeecCCCC---CcCccccccceeecCCCeeEeeeecCCC
Q 009492          489 LHSFEWELPTGT---KLNLSEKFGIVIKKKEPLVAIPTPRLSN  528 (533)
Q Consensus       489 l~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~  528 (533)
                      |++|+++++++.   +++....++++..+..++.+++++|.=|
T Consensus       469 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~  511 (517)
T PLN02687        469 VHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRLLP  511 (517)
T ss_pred             HHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCCCh
Confidence            999999998663   2233334667777778999999999534


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1e-78  Score=610.48  Aligned_cols=476  Identities=26%  Similarity=0.500  Sum_probs=367.8

Q ss_pred             CCCCCCCCCcccccccCCCCC-ChhHHHHHHHhhcC-CeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhH
Q 009492           41 TLPPGPRGLPVFGYLPFLGTT-DLHKKFTELSGVYG-PIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALV  118 (533)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~  118 (533)
                      ++||||+++|++||+..+... ..+.++.+|.++|| +||++++|++++|+|+||+.+++++.++...|..++.......
T Consensus        57 ~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~  136 (543)
T PLN02971         57 PLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKI  136 (543)
T ss_pred             CCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhh
Confidence            489999999999999876432 35778999999999 8999999999999999999999999998888888765333322


Q ss_pred             hhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHH
Q 009492          119 VSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNM  198 (533)
Q Consensus       119 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~  198 (533)
                      .+.+..++++..+|+.|+++||.+..+++++..++.+.+.+.+++..+++.+.+... +++++|+.+.+..+++++++++
T Consensus       137 l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~t~~vi~~~  215 (543)
T PLN02971        137 LSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVK-NSEPVDLRFVTRHYCGNAIKRL  215 (543)
T ss_pred             ccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceehHHHHHHHHHHHHHHH
Confidence            222223456777899999999999767888877778888888888888777765433 4567999999999999999999


Q ss_pred             HhcchhhhhhccccchhhhhhhH-HHHHHHH---hcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009492          199 LWGEALELKEKGTTNLRAGLKFK-LAELMVL---AGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNK  274 (533)
Q Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  274 (533)
                      +||.+................+. +...+..   .....+.+++|++.+++..+..+...+..+.+..++...++++++.
T Consensus       216 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  295 (543)
T PLN02971        216 MFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKM  295 (543)
T ss_pred             HhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998632200000000000111 2222211   1112234556666544222233445555666777777777766543


Q ss_pred             hcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHH
Q 009492          275 ELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKV  354 (533)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~l  354 (533)
                      ....       .   .....|+++.|++..+++ ....+++++|.+++.++++||+|||+++++|++++|+.||++|+|+
T Consensus       296 ~~~~-------~---~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl  364 (543)
T PLN02971        296 WREG-------K---RTQIEDFLDIFISIKDEA-GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKA  364 (543)
T ss_pred             Hhcc-------C---CCCCcCHHHHHHhhhccc-CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHH
Confidence            2100       0   112469999999864321 1124999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCC
Q 009492          355 QEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDN  434 (533)
Q Consensus       355 r~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~d  434 (533)
                      |+||++++++++.++.+++++|||++|||+||||++|++|..++|.+.+|++++||.|||||.|+++++++|+||++|+|
T Consensus       365 ~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~d  444 (543)
T PLN02971        365 MEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSD  444 (543)
T ss_pred             HHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCC
Confidence            99999999877789999999999999999999999999998778999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCC-CCcCccccccceee
Q 009492          435 PLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTG-TKLNLSEKFGIVIK  513 (533)
Q Consensus       435 p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~  513 (533)
                      |++|+||||++++.+  ......+..|+|||+|+|.|+|++||+.|+++++++||++|+|+++++ ..+++.+.++ ++.
T Consensus       445 P~~F~PeRfl~~~~~--~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~  521 (543)
T PLN02971        445 PLSFKPERHLNECSE--VTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMF  521 (543)
T ss_pred             ccccCcccCCCCCcc--ccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-ccc
Confidence            999999999964211  111124568999999999999999999999999999999999998765 3566666676 665


Q ss_pred             cCCCeeEeeeecCCCCccC
Q 009492          514 KKEPLVAIPTPRLSNSELY  532 (533)
Q Consensus       514 ~~~~~~~~~~~r~~~~~~~  532 (533)
                      .++++.+.+++| ..+++|
T Consensus       522 ~~~~~~~~~~~~-~~~~~~  539 (543)
T PLN02971        522 LSKPLVMVGELR-LSEDLY  539 (543)
T ss_pred             ccccceeeeeec-CCcccc
Confidence            667999999999 556666


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=6.7e-78  Score=602.65  Aligned_cols=464  Identities=33%  Similarity=0.632  Sum_probs=371.7

Q ss_pred             CCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHhh
Q 009492           41 TLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVS  120 (533)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~  120 (533)
                      +.||||+++|++||+..+...+++.++.+++++||++|++++|+.++|+++||+++++|+.++...|..++.........
T Consensus        28 ~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~  107 (499)
T PLN03234         28 RLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMS  107 (499)
T ss_pred             CCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhc
Confidence            37999999999999988744467889999999999999999999999999999999999999877887776544333333


Q ss_pred             cCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHHHh
Q 009492          121 YGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLW  200 (533)
Q Consensus       121 ~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  200 (533)
                      +.+..+.+...++.|+++|+.+..++|++++++.+.+.+.+++.++++.+.+... +++++|+.+.+..+++|+++.++|
T Consensus       108 ~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~-~~~~vd~~~~~~~~t~dvi~~~~f  186 (499)
T PLN03234        108 YQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAAD-QSGTVDLSELLLSFTNCVVCRQAF  186 (499)
T ss_pred             cCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhcc-CCCeEEHHHHHHHHHHHHHHHHHh
Confidence            3344455556689999999986458999999999999999999999999976543 567899999999999999999999


Q ss_pred             cchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccccccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009492          201 GEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLSWLD-IQGIERRAKKISLWLDNVINSTVEQHRNKELT  277 (533)
Q Consensus       201 G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  277 (533)
                      |.+++..  ..    ....+.  +...........+...+|++.++. +.+..++..++.+.+..++.+.++++++... 
T Consensus       187 G~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  259 (499)
T PLN03234        187 GKRYNEY--GT----EMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR-  259 (499)
T ss_pred             CCccccc--ch----hHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence            9987643  11    111111  222222222223334455543321 1223456677788888888888877654320 


Q ss_pred             hhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHH
Q 009492          278 VEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEE  357 (533)
Q Consensus       278 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~E  357 (533)
                              .   .....|+++.|++..++...+..+++++|.+++.++++||+||||++++|++++|++||++|+|+|+|
T Consensus       260 --------~---~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~E  328 (499)
T PLN03234        260 --------P---KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDE  328 (499)
T ss_pred             --------c---CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence                    0   12346899999876543222346899999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCC-CCCC
Q 009492          358 LAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLW-DNPL  436 (533)
Q Consensus       358 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~  436 (533)
                      +++++++.+.++.+++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|.++++++|+||++| +||+
T Consensus       329 i~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~  408 (499)
T PLN03234        329 VRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPN  408 (499)
T ss_pred             HHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChh
Confidence            999998767789999999999999999999999999987679999999999999999999999999999999999 8999


Q ss_pred             CCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCC---CcCccccccceee
Q 009492          437 QFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGT---KLNLSEKFGIVIK  513 (533)
Q Consensus       437 ~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~  513 (533)
                      +||||||++++.  .......+..|+|||+|+|+|+|++||++||++++++|+++|+|+++++.   .+..+..++++..
T Consensus       409 ~F~PeR~l~~~~--~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  486 (499)
T PLN03234        409 EFIPERFMKEHK--GVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMH  486 (499)
T ss_pred             hcCchhhcCCCC--CcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccc
Confidence            999999996521  11123345689999999999999999999999999999999999998762   3344456788888


Q ss_pred             cCCCeeEeeeec
Q 009492          514 KKEPLVAIPTPR  525 (533)
Q Consensus       514 ~~~~~~~~~~~r  525 (533)
                      +++++.+.+++|
T Consensus       487 ~~~~~~~~~~~~  498 (499)
T PLN03234        487 KKEHLVLAPTKH  498 (499)
T ss_pred             cCCCeEEEeecC
Confidence            888999998887


No 5  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.7e-78  Score=571.91  Aligned_cols=467  Identities=25%  Similarity=0.402  Sum_probs=359.6

Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCCCcccccccCCCC-CChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHh
Q 009492           24 AVVYFAWNVKKSRKANATLPPGPRGLPVFGYLPFLGT-TDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRD  102 (533)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~  102 (533)
                      +++|++|.+....+..+ ..|+|++.|++||+..+.. +.......+...++|+++.++.+.++.++|+||+++++|+.+
T Consensus        15 ~l~y~~~~~~~~yw~rr-Gi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik   93 (499)
T KOG0158|consen   15 VLLYLWLRWTYSYWRRR-GIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIK   93 (499)
T ss_pred             HHHHHHHHhhhhhhccC-CCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHH
Confidence            34444444442233333 4688888999999987643 222344444444459999999999999999999999999999


Q ss_pred             CCcccCCCC--chhhhhHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCc
Q 009492          103 QDTTFANRD--PPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKP  180 (533)
Q Consensus       103 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~  180 (533)
                      .-++|.++.  ....... .. +...+|...|+.||++|..++ |.|++++++.+.+.+.+...++++.+..+.. .+..
T Consensus        94 ~F~~F~~r~~~~~~d~~~-~l-~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~-~~~~  169 (499)
T KOG0158|consen   94 DFDNFYNRKRPIYGDPED-PL-SALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSE-GGQE  169 (499)
T ss_pred             hCccCcCCCCCCcCCCCC-cc-cccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhc-ccCC
Confidence            988888843  2222211 11 234455667999999999997 9999999999999999999999999987654 2257


Q ss_pred             cchhhhHHHHHHHHHHHHHhcchhhhhhccccchhhhhhhH--HHHHHHH-hcCCcc----ccccccccccchhhHHHHH
Q 009492          181 IDIGELSFSTLVCAIQNMLWGEALELKEKGTTNLRAGLKFK--LAELMVL-AGTPNI----SDVFPMLSWLDIQGIERRA  253 (533)
Q Consensus       181 vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~----~~~~P~l~~~~~~~~~~~~  253 (533)
                      +++.+.+..++.|+|++++||.+.+...+..      ..|.  ....... .....+    ...+|.+...  .......
T Consensus       170 ~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~------~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~--l~~~~~~  241 (499)
T KOG0158|consen  170 GEIKDLCARYTTDVIGSCAFGLDANSLRDPK------AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP--LRVKLFP  241 (499)
T ss_pred             ccHHHHHHHHHHHHHhHhhcccchhhhcCch------HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh--hhcccCh
Confidence            8888899999999999999999988772111      1111  1111111 111111    1223332211  0111223


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcchhhhhhhccCCCCCCcchHHHHHHHhccC--CC-CCC-CCCHHHHHHHHHHHHHhc
Q 009492          254 KKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRNKNFLQLLLELQEN--DD-SAS-SISMNQFKAVLADIITSG  329 (533)
Q Consensus       254 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~-~~~-~l~~~~i~~~~~~~~~AG  329 (533)
                      ....+.+.+++...++.|..+               +...+|+++.+++.+.+  .. ... .++.+||+++++.|++||
T Consensus       242 ~~~~~~~~~~v~~~v~~R~~~---------------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AG  306 (499)
T KOG0158|consen  242 EDVTDFFRKLVNSRVEQREKE---------------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAG  306 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc---------------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhh
Confidence            344555666666666665211               34679999999998854  11 112 599999999999999999


Q ss_pred             cchhhHhHHHHHHHHhhChHHHHHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccC-
Q 009492          330 TDTTTTMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIG-  408 (533)
Q Consensus       330 ~~tta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~-  408 (533)
                      .||||+++++++|+||+|||+|+|||+||+++......++++.+++|+||++||+||||+||+++. +.|.+++|+++. 
T Consensus       307 feTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~  385 (499)
T KOG0158|consen  307 FETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPG  385 (499)
T ss_pred             hHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCC
Confidence            999999999999999999999999999999997665459999999999999999999999999999 679999999999 


Q ss_pred             CeeeCCCCEEEEcchhhhcCCCCCCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 009492          409 GYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASL  488 (533)
Q Consensus       409 g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~l  488 (533)
                      ++.||||+.|.++++++||||++||||++|+||||.+++.+     ..+++.|+|||.|||.|+|.+||.+|+|+.|++|
T Consensus       386 ~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-----~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~l  460 (499)
T KOG0158|consen  386 GFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-----SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHL  460 (499)
T ss_pred             CeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-----ccCCccccCCCCCccccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999975221     3467899999999999999999999999999999


Q ss_pred             HHhceeecCCCCCcCccccc---cceeecCCCeeEeeeecC
Q 009492          489 LHSFEWELPTGTKLNLSEKF---GIVIKKKEPLVAIPTPRL  526 (533)
Q Consensus       489 l~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~  526 (533)
                      |++|+++..+. ..+. ...   +.+..+++++.+++++|.
T Consensus       461 L~~f~~~~~~~-t~~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  461 LRNFSFEVCPT-TIIP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             HhhCEEecCCc-ccCc-ccCCccceeeecCCceEEEEEeCC
Confidence            99999999884 3333 334   678889999999999984


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.8e-77  Score=593.60  Aligned_cols=468  Identities=37%  Similarity=0.734  Sum_probs=372.8

Q ss_pred             CCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHhh
Q 009492           41 TLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVS  120 (533)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~  120 (533)
                      .+||||+++|++|++..+ ..+++.++.+++++||+||++++|++++|+|+||+++++++.++...|..++.........
T Consensus        31 ~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~  109 (504)
T PLN00110         31 KLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLA  109 (504)
T ss_pred             CCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhc
Confidence            389999999999998776 4568899999999999999999999999999999999999998877787776543222222


Q ss_pred             cCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHHHh
Q 009492          121 YGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLW  200 (533)
Q Consensus       121 ~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  200 (533)
                      .++.+++++.+|+.|+++|+.+..++|+...++.+.+.+.+++..+++.+.+... .|+++|+.+.+..+++|+++.++|
T Consensus       110 ~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~-~g~~~~~~~~~~~~~~~vi~~~~f  188 (504)
T PLN00110        110 YGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ-RGEPVVVPEMLTFSMANMIGQVIL  188 (504)
T ss_pred             cCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc-CCCcEeHHHHHHHHHHHHHHHHHh
Confidence            3344566777899999999999756899999999999999999999999876543 567899999999999999999999


Q ss_pred             cchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 009492          201 GEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTV  278 (533)
Q Consensus       201 G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  278 (533)
                      |.+....  ..   .....+.  +...+.......+...+|++.++...+..++..+..+.+..++.+.++++++...  
T Consensus       189 g~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  261 (504)
T PLN00110        189 SRRVFET--KG---SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH--  261 (504)
T ss_pred             CCccccc--Cc---hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence            9986211  11   0111222  2333322222333345666554432223344555667777777777776654320  


Q ss_pred             hhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHH
Q 009492          279 EGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEEL  358 (533)
Q Consensus       279 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei  358 (533)
                             .   .....|+++.+++...+. .+..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|+
T Consensus       262 -------~---~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei  330 (504)
T PLN00110        262 -------E---RKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEM  330 (504)
T ss_pred             -------c---cccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence                   0   123468999999754321 24569999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCCCCCC
Q 009492          359 AQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQF  438 (533)
Q Consensus       359 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F  438 (533)
                      +++++.+..++.+++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|.++++++|+||++|+||++|
T Consensus       331 ~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F  410 (504)
T PLN00110        331 DQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEF  410 (504)
T ss_pred             HHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccC
Confidence            99998767789999999999999999999999999987789999999999999999999999999999999999999999


Q ss_pred             CCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeecCCCe
Q 009492          439 RPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPL  518 (533)
Q Consensus       439 ~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (533)
                      +||||++++..+ .....++..|+|||+|+|.|+|++||++|+++++++|+++|||++.++.+.+.....+++..++.++
T Consensus       411 ~PeRfl~~~~~~-~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (504)
T PLN00110        411 RPERFLSEKNAK-IDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPL  489 (504)
T ss_pred             CcccccCCCCcc-cccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCc
Confidence            999999642111 1111123579999999999999999999999999999999999998775544444577888888999


Q ss_pred             eEeeeecCCCC
Q 009492          519 VAIPTPRLSNS  529 (533)
Q Consensus       519 ~~~~~~r~~~~  529 (533)
                      ++++++|...|
T Consensus       490 ~~~~~~r~~~~  500 (504)
T PLN00110        490 SAMVTPRLHQS  500 (504)
T ss_pred             eEeeccCCCch
Confidence            99999996444


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=7.8e-77  Score=596.63  Aligned_cols=480  Identities=32%  Similarity=0.629  Sum_probs=374.0

Q ss_pred             hcccCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCc
Q 009492           33 KKSRKANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDP  112 (533)
Q Consensus        33 ~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~  112 (533)
                      ++..+...+.||||+++|++||+..+ +.+++.++.++++|||++|++++++.++++++||+.+++++.++...|..++.
T Consensus        24 ~~~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~  102 (514)
T PLN03112         24 NASMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPR  102 (514)
T ss_pred             cccccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCC
Confidence            33334444589999999999999877 56789999999999999999999999999999999999999887777776655


Q ss_pred             hhhhhHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHH
Q 009492          113 PKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLV  192 (533)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~  192 (533)
                      ........++...+++..+|+.|+.+|+.+..++|+..+++.+.+.+.+++..+++.+.+... .+.++|+.+.+..+++
T Consensus       103 ~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~-~~~~vd~~~~~~~~~~  181 (514)
T PLN03112        103 TLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ-TGKPVNLREVLGAFSM  181 (514)
T ss_pred             cccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc-cCCeeeHHHHHHHHHH
Confidence            332222223334455667899999999997667899999999999999999999998775443 5678999999999999


Q ss_pred             HHHHHHHhcchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009492          193 CAIQNMLWGEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQ  270 (533)
Q Consensus       193 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  270 (533)
                      ++++.++||.++.......  ......+.  ...+........+...+|++.++...+..++..+..+.+..+++..+++
T Consensus       182 ~vi~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  259 (514)
T PLN03112        182 NNVTRMLLGKQYFGAESAG--PKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDE  259 (514)
T ss_pred             HHHHHHHcCCccccccccc--hHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999874321100  01111222  2233222222233345565544422233355566677777788888877


Q ss_pred             HHhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHH
Q 009492          271 HRNKELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQV  350 (533)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~  350 (533)
                      +++.....       .  ......|+++.+++...++ ....++++++.+++..+++||+||||.+++|++++|++||++
T Consensus       260 ~~~~~~~~-------~--~~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~v  329 (514)
T PLN03112        260 HRRARSGK-------L--PGGKDMDFVDVLLSLPGEN-GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRV  329 (514)
T ss_pred             HHHhhccc-------c--cCCccchHHHHHHHhhccc-cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHH
Confidence            66543110       0  0123469999999865432 223589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCC
Q 009492          351 MKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPK  430 (533)
Q Consensus       351 q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~  430 (533)
                      |+|+++|++++++..+.++.+++++|||++|||+||||++|+++..++|.+.+|++++||.|||||.|.++++++|+||+
T Consensus       330 q~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~  409 (514)
T PLN03112        330 LRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTK  409 (514)
T ss_pred             HHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcc
Confidence            99999999999987777899999999999999999999999999866899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCC---CcCcccc
Q 009492          431 LWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGT---KLNLSEK  507 (533)
Q Consensus       431 ~~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~  507 (533)
                      +|+||++||||||.+++..........+..|+|||+|+|.|+|++||++|+++++++||++|||+++++.   .+.....
T Consensus       410 ~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  489 (514)
T PLN03112        410 IWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEV  489 (514)
T ss_pred             cCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccc
Confidence            9999999999998753211110011234589999999999999999999999999999999999987653   2334445


Q ss_pred             ccceeecCCCeeEeeeecC
Q 009492          508 FGIVIKKKEPLVAIPTPRL  526 (533)
Q Consensus       508 ~~~~~~~~~~~~~~~~~r~  526 (533)
                      ++++..+++++.+.+.+|.
T Consensus       490 ~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        490 YGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             cCcccccCCCeEEEeecCC
Confidence            6788778889999999994


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1e-76  Score=594.27  Aligned_cols=464  Identities=37%  Similarity=0.705  Sum_probs=358.9

Q ss_pred             CCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHhh
Q 009492           41 TLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVS  120 (533)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~  120 (533)
                      ++||||+++|++|++..+ ....+.++.+|+++||++|++++++.++|+|+||+++++++.++...|..++.........
T Consensus        36 ~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~  114 (516)
T PLN02183         36 PYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLT  114 (516)
T ss_pred             CCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccc
Confidence            389999999999998776 4456788999999999999999999999999999999999998777777665432222222


Q ss_pred             cCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHHHh
Q 009492          121 YGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLW  200 (533)
Q Consensus       121 ~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  200 (533)
                      .++..++++.+|+.|+++|+++..++|+.+.++.+.+. .+++..+++.+...   .+.++|+.+.+..++++++++++|
T Consensus       115 ~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~---~~~~v~~~~~~~~~~~~vi~~~~f  190 (516)
T PLN02183        115 YDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN---IGKPVNIGELIFTLTRNITYRAAF  190 (516)
T ss_pred             cCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc---CCCcEeHHHHHHHHHHHHHHhHhh
Confidence            22345667778999999999854589999999988875 56888999988642   467899999999999999999999


Q ss_pred             cchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Q 009492          201 GEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTVEG  280 (533)
Q Consensus       201 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  280 (533)
                      |.+.+..  ..    ..... +...............+|++.++.+....++..+..+.+.+++...+++++++..... 
T Consensus       191 G~~~~~~--~~----~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-  262 (516)
T PLN02183        191 GSSSNEG--QD----EFIKI-LQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQN-  262 (516)
T ss_pred             cCcccch--HH----HHHHH-HHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-
Confidence            9876432  11    00111 2222222223334455666554422223445556677777777777766654321110 


Q ss_pred             hhhhccCCCCCCcchHHHHHHHhccCCC---------CCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHH
Q 009492          281 EERAGKNFEGSRNKNFLQLLLELQENDD---------SASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVM  351 (533)
Q Consensus       281 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q  351 (533)
                       .   ...+.....|+++.+++...++.         .+..++++++.+++.++++||+|||+.+++|++++|++||++|
T Consensus       263 -~---~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq  338 (516)
T PLN02183        263 -A---DNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDL  338 (516)
T ss_pred             -c---ccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHH
Confidence             0   00001134689999998543210         1235899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCC
Q 009492          352 KKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKL  431 (533)
Q Consensus       352 ~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~  431 (533)
                      +|+++|++++++.++.++.+++++||||+|||+||||++|++|+. .|.+.+|++++||.|||||.|.++++++|+||++
T Consensus       339 ~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~  417 (516)
T PLN02183        339 KRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNS  417 (516)
T ss_pred             HHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccc
Confidence            999999999997666789999999999999999999999999996 5999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCC---cCccccc
Q 009492          432 WDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTK---LNLSEKF  508 (533)
Q Consensus       432 ~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~  508 (533)
                      |+||++|+||||++++..   ....++..|+|||+|+|.|+|++||++|+++++|+|+++|++++.++..   ......+
T Consensus       418 ~~dP~~F~PeRfl~~~~~---~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~  494 (516)
T PLN02183        418 WEDPDTFKPSRFLKPGVP---DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVF  494 (516)
T ss_pred             cCCccccCchhhCCCCCc---cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcc
Confidence            999999999999964211   1123456899999999999999999999999999999999999877632   2222344


Q ss_pred             cceeecCCCeeEeeeec
Q 009492          509 GIVIKKKEPLVAIPTPR  525 (533)
Q Consensus       509 ~~~~~~~~~~~~~~~~r  525 (533)
                      +.+..+..++++.+++|
T Consensus       495 ~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        495 GLTAPRATRLVAVPTYR  511 (516)
T ss_pred             ccccccCCCcEEEeecC
Confidence            65555667889999988


No 9  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=9.5e-76  Score=587.72  Aligned_cols=481  Identities=26%  Similarity=0.492  Sum_probs=364.1

Q ss_pred             CCCCCCCCCCCcccccccCCC--CCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhh
Q 009492           39 NATLPPGPRGLPVFGYLPFLG--TTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAA  116 (533)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~  116 (533)
                      ..++||||+++|++|++..+.  ..+++.++.+|+++||++|++++|+.++|+|+||+++++++.++...|..++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            344899999999999987653  235788999999999999999999999999999999999999888778776653322


Q ss_pred             hHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHH
Q 009492          117 LVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQ  196 (533)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~  196 (533)
                      ...+.++..+.+..+|+.|+++||.+..++|+.++++.+.+.+.+.+..+++.+.+... .+..+|+.+.+..++.++++
T Consensus       113 ~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~~~~~~~~ii~  191 (519)
T PLN00168        113 RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAE-DAAAPRVVETFQYAMFCLLV  191 (519)
T ss_pred             hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCcCHHHHHHHHHHHHHH
Confidence            22221112222235799999998754459999999999999999999999999976433 34568999999999999999


Q ss_pred             HHHhcchhhhhhccccchhhhhhhHHHHHHHH-hcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009492          197 NMLWGEALELKEKGTTNLRAGLKFKLAELMVL-AGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKE  275 (533)
Q Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  275 (533)
                      .++||.+++..  ..   ...... ....... .....+...+|.+.+....+..++..+..+.+.+++...++++++..
T Consensus       192 ~~~fG~~~~~~--~~---~~~~~~-~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (519)
T PLN00168        192 LMCFGERLDEP--AV---RAIAAA-QRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYK  265 (519)
T ss_pred             HHHcCCCcChh--hH---HHHHHH-HHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999987532  11   000011 1111111 11222334556443221122234455667778888888887766532


Q ss_pred             cchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHH
Q 009492          276 LTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQ  355 (533)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr  355 (533)
                      ...+.... ..........|+++.|++...+++.+..++++++.+++.++++||+|||+.+++|++++|++||++|+|++
T Consensus       266 ~~~~~~~~-~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~  344 (519)
T PLN00168        266 NHLGQGGE-PPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLH  344 (519)
T ss_pred             hhccccCc-cccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            10000000 00000012468999999865432233569999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCC-CccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCC
Q 009492          356 EELAQVVGMD-SCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDN  434 (533)
Q Consensus       356 ~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~d  434 (533)
                      +||+++++++ +.++.+++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|.++++++|+||++|+|
T Consensus       345 ~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~  424 (519)
T PLN00168        345 DEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWER  424 (519)
T ss_pred             HHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCC
Confidence            9999999753 568999999999999999999999999998778999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCcccC-CCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceee
Q 009492          435 PLQFRPERFLDDGIASKFDY-SGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIK  513 (533)
Q Consensus       435 p~~F~p~R~l~~~~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  513 (533)
                      |++|+||||++++.++..+. ...+..|+|||+|+|+|+|++||++|+++++++||++|||+++++...+.....+++..
T Consensus       425 p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  504 (519)
T PLN00168        425 PMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTV  504 (519)
T ss_pred             ccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEe
Confidence            99999999996421111111 12345899999999999999999999999999999999999987654444434556666


Q ss_pred             cCCCeeEeeeecCC
Q 009492          514 KKEPLVAIPTPRLS  527 (533)
Q Consensus       514 ~~~~~~~~~~~r~~  527 (533)
                      ++.++++++++|+-
T Consensus       505 ~~~~~~~~~~~R~~  518 (519)
T PLN00168        505 MAKPLRARLVPRRT  518 (519)
T ss_pred             ecCCcEEEEEeccC
Confidence            77789999999863


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.6e-75  Score=586.04  Aligned_cols=467  Identities=30%  Similarity=0.522  Sum_probs=352.3

Q ss_pred             CCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHhhc
Q 009492           42 LPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVSY  121 (533)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~  121 (533)
                      .||||++.|++|++..+.....+..+.+|+++||+||+++++++++|+|+||+.+++++.++...|..++.........-
T Consensus        31 ~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g  110 (503)
T PLN02394         31 LPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTG  110 (503)
T ss_pred             CCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhcc
Confidence            79999999999999877443467899999999999999999999999999999999999987666765543222222211


Q ss_pred             CCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHHHhc
Q 009492          122 GGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWG  201 (533)
Q Consensus       122 ~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG  201 (533)
                      .+.+++++.+|+.|+++||.+..++|+.+.++.+.+.+.+++..+++.+.......+..+|+.+.+..+++|+++.++||
T Consensus       111 ~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG  190 (503)
T PLN02394        111 KGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFD  190 (503)
T ss_pred             CCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhC
Confidence            23456667789999999999866899999999999999999999999987653323456899999999999999999999


Q ss_pred             chhhhhhccccchhhhhhhHHHHHHHHhcC--CccccccccccccchhhHHHHHHHHHHHHHH-HHHHHHHHHHhhhcch
Q 009492          202 EALELKEKGTTNLRAGLKFKLAELMVLAGT--PNISDVFPMLSWLDIQGIERRAKKISLWLDN-VINSTVEQHRNKELTV  278 (533)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~  278 (533)
                      .+++..  ........... ..........  ..+...+|++.+. .....+........... +.+..++++++.....
T Consensus       191 ~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (503)
T PLN02394        191 RRFESE--DDPLFLKLKAL-NGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDERKKLMSAK  266 (503)
T ss_pred             CCcccc--cchhHHHHHHH-HHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            988654  21001100011 1111111111  1222334443221 11111222222222222 2233344443321000


Q ss_pred             hhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHH
Q 009492          279 EGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEEL  358 (533)
Q Consensus       279 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei  358 (533)
                             . .+.+...|+++.|++...+    +.++++++..++.++++||+||||.+++|++++|++||++|+|+|+||
T Consensus       267 -------~-~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei  334 (503)
T PLN02394        267 -------G-MDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDEL  334 (503)
T ss_pred             -------c-CCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence                   0 0022347899999986543    348999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCCCCCC
Q 009492          359 AQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQF  438 (533)
Q Consensus       359 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F  438 (533)
                      +++++.+..++.+++++||||+|||+||||++|++|...+|.+.+|++++||.||+||.|.++++++|+||++|+||++|
T Consensus       335 ~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F  414 (503)
T PLN02394        335 DTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEF  414 (503)
T ss_pred             HHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCcccc
Confidence            99998666788999999999999999999999999998789999999999999999999999999999999999999999


Q ss_pred             CCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCC-CcCcccccc-ceeecCC
Q 009492          439 RPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGT-KLNLSEKFG-IVIKKKE  516 (533)
Q Consensus       439 ~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~-~~~~~~~  516 (533)
                      +||||++++.  .......+.+|+|||+|+|.|+|++||++|+++++++|+++|++++.++. .++..+.++ +....+.
T Consensus       415 ~PeRwl~~~~--~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (503)
T PLN02394        415 RPERFLEEEA--KVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAK  492 (503)
T ss_pred             CccccCCCCC--cccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCC
Confidence            9999996421  11112235689999999999999999999999999999999999987774 355544454 4554566


Q ss_pred             CeeEeeeecC
Q 009492          517 PLVAIPTPRL  526 (533)
Q Consensus       517 ~~~~~~~~r~  526 (533)
                      ++++++++|.
T Consensus       493 ~~~~~~~~r~  502 (503)
T PLN02394        493 HSTVVFKPRS  502 (503)
T ss_pred             CceEEeecCC
Confidence            9999999995


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.3e-75  Score=583.54  Aligned_cols=455  Identities=24%  Similarity=0.400  Sum_probs=350.7

Q ss_pred             CCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhh
Q 009492           37 KANATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAA  116 (533)
Q Consensus        37 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~  116 (533)
                      +..++.+|||+++|++|++..+ ..+++..+.+++++||+||+++++++++|+++||+.+++++.++...|..++.....
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  103 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI  103 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence            3344578999999999999877 457899999999999999999999999999999999999999876566555433222


Q ss_pred             hHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHH
Q 009492          117 LVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQ  196 (533)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~  196 (533)
                      .... .+.+++ +.+|+.|+++|+++. +.|+...++.+.+.+.+.+..+++.+..... .++.+|+...+..+++|+++
T Consensus       104 ~~~~-~~~~l~-~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~dvi~  179 (482)
T PTZ00404        104 KHGT-FYHGIV-TSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIES-SGETFEPRYYLTKFTMSAMF  179 (482)
T ss_pred             eeec-cCCcee-ccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHh-cCCccCHHHHHHHHHHHHHH
Confidence            1111 245554 457999999999997 9999999999999999999999999875433 46679999999999999999


Q ss_pred             HHHhcchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009492          197 NMLWGEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNK  274 (533)
Q Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  274 (533)
                      .++||.+.+..+....  .....+.  +..++.......+...++++... +........+..+.+..++++.++++++.
T Consensus       180 ~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  256 (482)
T PTZ00404        180 KYIFNEDISFDEDIHN--GKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKT  256 (482)
T ss_pred             HHHhccccccccccch--hHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999998754311000  0111222  33333333222222222322211 11111222334555566666555544432


Q ss_pred             hcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHH
Q 009492          275 ELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKV  354 (533)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~l  354 (533)
                      .          .   .....|+++.|++...+   ....+.+++.+++.++++||+|||+.+++|++++|++||++|+|+
T Consensus       257 ~----------~---~~~~~dll~~ll~~~~~---~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl  320 (482)
T PTZ00404        257 I----------D---PEVPRDLLDLLIKEYGT---NTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKA  320 (482)
T ss_pred             c----------C---CCCcccHHHHHHHHhcc---CCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHH
Confidence            1          0   12356899999986432   112233458899999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCccc-CCeeeCCCCEEEEcchhhhcCCCCCC
Q 009492          355 QEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNI-GGYNIPKDTTIMLNVRAIHRDPKLWD  433 (533)
Q Consensus       355 r~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l-~g~~ip~Gt~v~~~~~~~~~d~~~~~  433 (533)
                      ++|++++++++..++.+++++||||+|||+||||++|+++..++|.+.+|+++ +||.|||||.|.++++++|+||++|+
T Consensus       321 ~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~  400 (482)
T PTZ00404        321 YNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFE  400 (482)
T ss_pred             HHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccC
Confidence            99999999876678899999999999999999999999997668999999999 99999999999999999999999999


Q ss_pred             CCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceee
Q 009492          434 NPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIK  513 (533)
Q Consensus       434 dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  513 (533)
                      ||++|+||||++.         ..+.+|+|||+|+|.|+|++||++|+++++++|+++|+|+++++.+.+.....+++..
T Consensus       401 dP~~F~PeRwl~~---------~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  471 (482)
T PTZ00404        401 NPEQFDPSRFLNP---------DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK  471 (482)
T ss_pred             CccccCccccCCC---------CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec
Confidence            9999999999953         1345899999999999999999999999999999999999876654444444566666


Q ss_pred             cCCCeeEeeeec
Q 009492          514 KKEPLVAIPTPR  525 (533)
Q Consensus       514 ~~~~~~~~~~~r  525 (533)
                       +.++++.+++|
T Consensus       472 -~~~~~v~~~~R  482 (482)
T PTZ00404        472 -PNKFKVLLEKR  482 (482)
T ss_pred             -CCCceeeeecC
Confidence             55789999887


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2.6e-75  Score=582.69  Aligned_cols=465  Identities=33%  Similarity=0.602  Sum_probs=353.8

Q ss_pred             CCCCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhH
Q 009492           39 NATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALV  118 (533)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~  118 (533)
                      ...+||||+++|++||+..+...+++.++.+|+++||+||++++++.++|+|+||+.+++++.++...|..++.......
T Consensus        27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~  106 (502)
T PLN02966         27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEF  106 (502)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcccee
Confidence            33479999999999999887555788999999999999999999999999999999999999987766765543322222


Q ss_pred             hhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHH
Q 009492          119 VSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNM  198 (533)
Q Consensus       119 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~  198 (533)
                      ..++...+.+..+|+.|+.+|+.+..++|+...++.+.+.+.+++.++++.|.+... .++++|+.+.+..+++|+++.+
T Consensus       107 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~t~dvi~~~  185 (502)
T PLN02966        107 ISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD-KSEVVDISELMLTFTNSVVCRQ  185 (502)
T ss_pred             eccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceeHHHHHHHHHHHHHHHH
Confidence            223333444556799999999995458999999999999999999999999976543 4668999999999999999999


Q ss_pred             HhcchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccccccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009492          199 LWGEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLSWLD-IQGIERRAKKISLWLDNVINSTVEQHRNKE  275 (533)
Q Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  275 (533)
                      +||.+++..  ..    ....+.  +...........+...+|++..+. +.+..+......+...+.++..+++..+..
T Consensus       186 ~fG~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (502)
T PLN02966        186 AFGKKYNED--GE----EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK  259 (502)
T ss_pred             HhCCccCcc--ch----HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999987644  11    111111  222222222222333445332211 111112223334445555555555443221


Q ss_pred             cchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHH
Q 009492          276 LTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQ  355 (533)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr  355 (533)
                      .         .   .....++++.+++..++...+..++++++.+++.++++||+|||+.+++|++++|++||++|+|++
T Consensus       260 ~---------~---~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~  327 (502)
T PLN02966        260 R---------V---KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQ  327 (502)
T ss_pred             c---------c---ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHH
Confidence            0         0   113468999999766543223468999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCC--CccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCC-
Q 009492          356 EELAQVVGMD--SCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLW-  432 (533)
Q Consensus       356 ~Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~-  432 (533)
                      +|++++++.+  ..++.+++++||||+|||+||||++|++++.++|.+.+|++++||.||+||.|.++++++|+||++| 
T Consensus       328 ~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g  407 (502)
T PLN02966        328 AEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWG  407 (502)
T ss_pred             HHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCccccc
Confidence            9999998642  3578999999999999999999999999987789999999999999999999999999999999999 


Q ss_pred             CCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCC---cCcccccc
Q 009492          433 DNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTK---LNLSEKFG  509 (533)
Q Consensus       433 ~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~  509 (533)
                      +||++|+||||++++.    .....+..|+|||+|+|+|+|++||++|++++++.||++|+|++.++..   ++.+...+
T Consensus       408 ~dP~~F~PeRwl~~~~----~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~  483 (502)
T PLN02966        408 PNPDEFRPERFLEKEV----DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTG  483 (502)
T ss_pred             CChhhCChhhhcCCCC----CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccC
Confidence            9999999999996421    1122356899999999999999999999999999999999999987642   33334456


Q ss_pred             ceeecCCCeeEeeeecCCC
Q 009492          510 IVIKKKEPLVAIPTPRLSN  528 (533)
Q Consensus       510 ~~~~~~~~~~~~~~~r~~~  528 (533)
                      +...++.+++  +++|+-|
T Consensus       484 ~~~~~~~~~~--~~~~~~~  500 (502)
T PLN02966        484 LAMHKSQHLK--LVPEKVN  500 (502)
T ss_pred             eeeccCCCeE--EEEEeCC
Confidence            6664555664  5555444


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=7.1e-74  Score=566.94  Aligned_cols=458  Identities=28%  Similarity=0.484  Sum_probs=359.5

Q ss_pred             CCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHhhcC
Q 009492           43 PPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVSYG  122 (533)
Q Consensus        43 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~  122 (533)
                      ||||+++|++||++.+...+++.++.+|+++||+||+++++++++|+|+||+.+++++.++...|..++..........+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998885566899999999999999999999999999999999999999888788776544333222211


Q ss_pred             CcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhccc-CCCccchhhhHHHHHHHHHHHHHhc
Q 009492          123 GNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNK-IGKPIDIGELSFSTLVCAIQNMLWG  201 (533)
Q Consensus       123 ~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~-~~~~vdl~~~~~~~~~~~i~~~~fG  201 (533)
                      +..++...+|+.|+++|+.+..++++...++.+.+.+.+.+..+++.+...... .++++|+.+.+..+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            223444445899999998887788998888889998888888888887654321 4567999999999999999999999


Q ss_pred             chhhhhhccccchhh----hhhhH--HHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009492          202 EALELKEKGTTNLRA----GLKFK--LAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKE  275 (533)
Q Consensus       202 ~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  275 (533)
                      .+.+...  ......    ...+.  ...+........+...+|.+.+++.....+...+.......+++..+++++++.
T Consensus       161 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  238 (466)
T PLN02655        161 EDVESVY--VEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRI  238 (466)
T ss_pred             ccccccc--ccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9876541  111110    01111  222222222233345667655553322233333334444566666666655432


Q ss_pred             cchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHH
Q 009492          276 LTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQ  355 (533)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr  355 (533)
                      .         .   +....|+++.+++..      ..++++++.+++.++++||+|||+.+++|++++|++||++|+|+|
T Consensus       239 ~---------~---~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~  300 (466)
T PLN02655        239 A---------R---GEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLY  300 (466)
T ss_pred             c---------C---CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            1         0   223468999999754      248999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCCC
Q 009492          356 EELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNP  435 (533)
Q Consensus       356 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  435 (533)
                      +||+++++.+. ++.++++++|||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||++|+||
T Consensus       301 ~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p  379 (466)
T PLN02655        301 REIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENP  379 (466)
T ss_pred             HHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCCh
Confidence            99999988644 89999999999999999999999999997789999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeecC
Q 009492          436 LQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKK  515 (533)
Q Consensus       436 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  515 (533)
                      ++|+||||++++..     ......++|||+|+|.|||++||+.|++++++.||++|+++++++.. +.....+++..++
T Consensus       380 ~~F~PeR~~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~  453 (466)
T PLN02655        380 EEWDPERFLGEKYE-----SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKL  453 (466)
T ss_pred             hccCccccCCCCcc-----cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeec
Confidence            99999999964211     11235799999999999999999999999999999999999976632 2334567778788


Q ss_pred             CCeeEeeeecCC
Q 009492          516 EPLVAIPTPRLS  527 (533)
Q Consensus       516 ~~~~~~~~~r~~  527 (533)
                      ++++|++++|.+
T Consensus       454 ~~~~~~~~~r~~  465 (466)
T PLN02655        454 HPLHAHLKPRGS  465 (466)
T ss_pred             CCcEEEEeecCC
Confidence            999999999865


No 14 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.6e-72  Score=560.91  Aligned_cols=478  Identities=26%  Similarity=0.439  Sum_probs=350.9

Q ss_pred             CCCCCCCCCcccccccCCCCCCh-hHHHHHHHhhc-CCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhH
Q 009492           41 TLPPGPRGLPVFGYLPFLGTTDL-HKKFTELSGVY-GPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALV  118 (533)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~~~-~~~~~~~~~ky-G~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~  118 (533)
                      ++||||+++|++|+++.+..... ..++.++.++| |+||++++|++++|+|+||+.++++++++...|..++.......
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~  119 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET  119 (534)
T ss_pred             CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence            47999999999999987643222 23455666665 79999999999999999999999999988777888765444333


Q ss_pred             hhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHH
Q 009492          119 VSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNM  198 (533)
Q Consensus       119 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~  198 (533)
                      ...++.++++...|+.|+++|++++..+++......+.+....++..+++.+.+... .+.++|+.+.+..+++++++.+
T Consensus       120 l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        120 IGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ-RSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCceeHHHHHHHHHHHHHHHH
Confidence            322233566666699999999999843445555555656666678888888875432 4567999999999999999999


Q ss_pred             Hhcchhhhhhccccc-hhhhhhhH--HHHHHH---HhcCCccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009492          199 LWGEALELKEKGTTN-LRAGLKFK--LAELMV---LAGTPNISDVFP-MLSWLDIQGIERRAKKISLWLDNVINSTVEQH  271 (533)
Q Consensus       199 ~fG~~~~~~~~~~~~-~~~~~~~~--~~~~~~---~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  271 (533)
                      +||.++...+..... ......+.  ......   ........+.+| ++.++...+...+.....+.+..+++..++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  278 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDER  278 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988543111000 00001111  111111   111112222333 33322112223344445566777777777776


Q ss_pred             HhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCC-CCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHH
Q 009492          272 RNKELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSAS-SISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQV  350 (533)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~-~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~  350 (533)
                      ++.....       .  +.....|+++.|++..++.  +. .++++++.+++.++++||+|||+.+++|++++|+.||++
T Consensus       279 ~~~~~~~-------~--~~~~~~d~l~~ll~~~~~~--~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~  347 (534)
T PLN03018        279 VELWREK-------G--GKAAVEDWLDTFITLKDQN--GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEI  347 (534)
T ss_pred             HHHhhhc-------c--CCCCcccHHHHHHHhhccc--CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH
Confidence            5432100       0  0112468999999765431  22 489999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCC
Q 009492          351 MKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPK  430 (533)
Q Consensus       351 q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~  430 (533)
                      |+|+++||+++++.++.++.+++.+||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||+
T Consensus       348 q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~  427 (534)
T PLN03018        348 LRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPK  427 (534)
T ss_pred             HHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcc
Confidence            99999999999987777899999999999999999999999999876799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcCCCCcCC-cccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCC-CcCccccc
Q 009492          431 LWDNPLQFRPERFLDDGIAS-KFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGT-KLNLSEKF  508 (533)
Q Consensus       431 ~~~dp~~F~p~R~l~~~~~~-~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~  508 (533)
                      +|+||++|+||||++++... .......+..|+|||+|+|.|+|++||++|+++++++|+++|+|+++++. .++.....
T Consensus       428 ~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  507 (534)
T PLN03018        428 IWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDD  507 (534)
T ss_pred             cCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccc
Confidence            99999999999999642111 11111245689999999999999999999999999999999999987653 33333333


Q ss_pred             cceeecCCCeeEeeeecCCCCccC
Q 009492          509 GIVIKKKEPLVAIPTPRLSNSELY  532 (533)
Q Consensus       509 ~~~~~~~~~~~~~~~~r~~~~~~~  532 (533)
                      +.+.. +.++.|++++| ...+++
T Consensus       508 ~~~~~-p~~~~v~~~~R-~~~~~~  529 (534)
T PLN03018        508 ASLLM-AKPLLLSVEPR-LAPNLY  529 (534)
T ss_pred             cceec-CCCeEEEEEec-cccccc
Confidence            44443 46899999999 323555


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.9e-73  Score=571.09  Aligned_cols=453  Identities=22%  Similarity=0.347  Sum_probs=349.6

Q ss_pred             CCCCCCCCcccccccCCCC------------------CChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhC
Q 009492           42 LPPGPRGLPVFGYLPFLGT------------------TDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQ  103 (533)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~  103 (533)
                      .||||+++|++||+..+..                  ......+.+|+++||++|++++|+.++|+|+||+.+++++.++
T Consensus        43 ~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~  122 (516)
T PLN02290         43 GVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKY  122 (516)
T ss_pred             CCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcC
Confidence            6899999999999876521                  1233356889999999999999999999999999999999986


Q ss_pred             CcccCCCCchhhhhHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccch
Q 009492          104 DTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDI  183 (533)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl  183 (533)
                      . .+..+............|.+++ ..+|+.|+++||.+. +.|+..+++.+.+.+.+++..+++.+.+....++..+|+
T Consensus       123 ~-~~~~r~~~~~~~~~~~~g~~l~-~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd~  199 (516)
T PLN02290        123 N-TVTGKSWLQQQGTKHFIGRGLL-MANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVEI  199 (516)
T ss_pred             C-CCCCCcchhhhHHHHHhcCCcc-ccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEh
Confidence            4 3444443211111111245554 457999999999997 899999999999999999999999997654323357999


Q ss_pred             hhhHHHHHHHHHHHHHhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHH
Q 009492          184 GELSFSTLVCAIQNMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNV  263 (533)
Q Consensus       184 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  263 (533)
                      .+.+..+++++++.++||.++...  .     ..... ...+............+|++.+++ .+..++.....+.+..+
T Consensus       200 ~~~~~~~~~~vi~~~~fG~~~~~~--~-----~~~~~-~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~  270 (516)
T PLN02290        200 GEYMTRLTADIISRTEFDSSYEKG--K-----QIFHL-LTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERL  270 (516)
T ss_pred             HHHHHHHHHHHHHHHHcCCccccc--h-----HHHHH-HHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHH
Confidence            999999999999999999886532  1     00111 111111111001111234333332 22234455566777888


Q ss_pred             HHHHHHHHHhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCC-CCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHH
Q 009492          264 INSTVEQHRNKELTVEGEERAGKNFEGSRNKNFLQLLLELQEND-DSASSISMNQFKAVLADIITSGTDTTTTMVEWTMA  342 (533)
Q Consensus       264 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~  342 (533)
                      +.+.++++++.....       .  +.....|+++.+++...+. ..+..++++++.+++.++++||+|||+++++|+++
T Consensus       271 ~~~~i~~~~~~~~~~-------~--~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~  341 (516)
T PLN02290        271 LMEIIQSRRDCVEIG-------R--SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLM  341 (516)
T ss_pred             HHHHHHHHHHHhhcc-------c--CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            888887766543110       0  0123478999999764422 12335889999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcc
Q 009492          343 ELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNV  422 (533)
Q Consensus       343 ~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~  422 (533)
                      +|++||++|+|+|+|++++++.+ .++.+++++||||+|||+||||++|+++. ++|.+.+|++++||.||+||.|.++.
T Consensus       342 ~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~  419 (516)
T PLN02290        342 LLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPV  419 (516)
T ss_pred             HHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecH
Confidence            99999999999999999998754 78999999999999999999999999997 68999999999999999999999999


Q ss_pred             hhhhcCCCCC-CCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCC
Q 009492          423 RAIHRDPKLW-DNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTK  501 (533)
Q Consensus       423 ~~~~~d~~~~-~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~  501 (533)
                      +++|+||++| +||++||||||++++  .     ..+..|+|||.|+|.|+|++||++|++++++.||++||++++++..
T Consensus       420 ~~~~rdp~~~~~dP~~F~PeRfl~~~--~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~  492 (516)
T PLN02290        420 LAIHHSEELWGKDANEFNPDRFAGRP--F-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR  492 (516)
T ss_pred             HHhcCChhhhCCChhhcCccccCCCC--C-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc
Confidence            9999999999 899999999999531  0     1234799999999999999999999999999999999999876632


Q ss_pred             cCccccccceeecCCCeeEeeeecC
Q 009492          502 LNLSEKFGIVIKKKEPLVAIPTPRL  526 (533)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                        .....+++..|+.++++++++|.
T Consensus       493 --~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        493 --HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             --cCccceeeecCCCCCeEEEEeCC
Confidence              22234578888899999999885


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.7e-73  Score=562.24  Aligned_cols=456  Identities=29%  Similarity=0.484  Sum_probs=354.5

Q ss_pred             CCCCCCCCCCcccccccCCCCC--ChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhh
Q 009492           40 ATLPPGPRGLPVFGYLPFLGTT--DLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAAL  117 (533)
Q Consensus        40 ~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~  117 (533)
                      ...||||+++|++|++..+...  .+..++.++..+||++|+.|++|.++++++||+.+++|+.+..........+....
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~  113 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESL  113 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHH
Confidence            3479999999999999887443  67888899999999999999999999999999999999975544443333333222


Q ss_pred             HhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHH
Q 009492          118 VVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQN  197 (533)
Q Consensus       118 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~  197 (533)
                      .. +.|.+++++. |+.|+++||+++ +.|+...++.+...+.++...++..+....  .+..+|+.+.+.++++|+++.
T Consensus       114 ~~-~lG~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  114 KP-WLGDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAA--SGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HH-HhcCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCeEcHHHHHHHHHHHHHHH
Confidence            22 2356777775 999999999997 999999999999999999988777776633  233399999999999999999


Q ss_pred             HHhcchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009492          198 MLWGEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFP-MLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNK  274 (533)
Q Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  274 (533)
                      +++|......  ..   .....+.  +..+....   ......| +..++...+..++..++.+.+.+++++.|+++++.
T Consensus       189 ~~~G~~~~~~--~~---~~~~~~~~a~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~  260 (497)
T KOG0157|consen  189 TAMGPESLDA--EG---PELFEYVQAFDDLTELI---SKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREE  260 (497)
T ss_pred             HhcCCccccc--cC---CcccHHHHHHHHHHHHH---HHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999322111  11   1111111  11111111   1111233 32222222256778888999999999999988876


Q ss_pred             hcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHH
Q 009492          275 ELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKV  354 (533)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~l  354 (533)
                      ......++       .....|+++.+....     +..+++++|.+++.+|++||+||||++++|++++|+.||++|+|+
T Consensus       261 ~~~~~~~~-------~~~~~d~L~~~~~~~-----~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~  328 (497)
T KOG0157|consen  261 LEKEGSGE-------EKKRLDFLDTLLLEE-----DKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKL  328 (497)
T ss_pred             HHhcCCcc-------cchhhhHHHHHHHhc-----cCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHH
Confidence            52210000       134678888633222     156999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCc-cchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCccc-CCeeeCCCCEEEEcchhhhcCCCCC
Q 009492          355 QEELAQVVGMDSC-VEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNI-GGYNIPKDTTIMLNVRAIHRDPKLW  432 (533)
Q Consensus       355 r~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l-~g~~ip~Gt~v~~~~~~~~~d~~~~  432 (533)
                      ++|++++++.+.. .+....++|+||++||+|||||||++|+. .|.+.+|+++ +||.||||+.|.++++++|||+++|
T Consensus       329 ~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~  407 (497)
T KOG0157|consen  329 REEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVW  407 (497)
T ss_pred             HHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCcccc
Confidence            9999999974333 23333446999999999999999999995 6999999999 5899999999999999999999999


Q ss_pred             C-CCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccce
Q 009492          433 D-NPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIV  511 (533)
Q Consensus       433 ~-dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  511 (533)
                      + ||++||||||++++...    ..++++|+|||+|+|.|+|++||++|||+++++||++|+|++..+..  ....+.++
T Consensus       408 ~~dp~~F~PeRf~~~~~~~----~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~  481 (497)
T KOG0157|consen  408 GEDPEEFDPERFLDGEEKA----KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELT  481 (497)
T ss_pred             CCChhhcCccccCCCCCcC----CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEE
Confidence            6 99999999999642111    34678999999999999999999999999999999999999877643  45567899


Q ss_pred             eecCCCeeEeeeecCC
Q 009492          512 IKKKEPLVAIPTPRLS  527 (533)
Q Consensus       512 ~~~~~~~~~~~~~r~~  527 (533)
                      ..++++++|++++|..
T Consensus       482 l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  482 LRPKNGLKVKLRPRGS  497 (497)
T ss_pred             EEecCCeEEEEEeCCC
Confidence            9999999999999963


No 17 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.2e-73  Score=522.75  Aligned_cols=457  Identities=25%  Similarity=0.372  Sum_probs=373.1

Q ss_pred             CCCCCCCCcccccccC---CCCCChhHHHHHHHhhcCCeEEEe-cCCeeEEEecCHHHHHHHHHhCCcccCCCC-chhhh
Q 009492           42 LPPGPRGLPVFGYLPF---LGTTDLHKKFTELSGVYGPIFKLW-LGNKLCVVVSSPSLIRQVVRDQDTTFANRD-PPKAA  116 (533)
Q Consensus        42 ~ppgp~~~p~~G~~~~---~~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~-~~~~~  116 (533)
                      ..|||+++|++|.+..   ....+.|+...++++|||+||+.. +|+...|.|.||+++..++++++. +..++ ....+
T Consensus        51 ~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~w  129 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEPW  129 (519)
T ss_pred             hcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccchh
Confidence            3588899999998873   223578999999999999999999 888999999999999999999874 34442 22222


Q ss_pred             --hHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcc--cCCCccchhhhHHHHHH
Q 009492          117 --LVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDN--KIGKPIDIGELSFSTLV  192 (533)
Q Consensus       117 --~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~--~~~~~vdl~~~~~~~~~  192 (533)
                        ..-.+++..+++..+|++|.+.|..+++.+++++.++.+.+.+++.+++++..+....+  ....+.|+.+.++++++
T Consensus       130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wsl  209 (519)
T KOG0159|consen  130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSL  209 (519)
T ss_pred             hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence              12234566666777899999999999999999999999999999999999999887654  24567899999999999


Q ss_pred             HHHHHHHhcchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009492          193 CAIQNMLWGEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQ  270 (533)
Q Consensus       193 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  270 (533)
                      ++|+.++||.+.++....  ..++...|.  +..++.....   ..+.|.++++...+.+++..++.+.+.+.....|+.
T Consensus       210 Esi~~V~l~~rlG~L~~~--~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  210 ESICLVLLGTRLGLLGES--PPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHHhcccccccCC--CCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988432  223334443  4444433322   223444333324456788888999999999999988


Q ss_pred             HHhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHH
Q 009492          271 HRNKELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQV  350 (533)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~  350 (533)
                      ..++...+..        .+....+.+-.++..       ..++.+++..+++.++.||.||||.++.|+||+|++||++
T Consensus       285 ~l~~l~~~~~--------~~~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~  349 (519)
T KOG0159|consen  285 ALEELEKQDS--------AGSEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEV  349 (519)
T ss_pred             HHHHHHhccc--------cccchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHH
Confidence            8776633200        011233444444432       2388999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCC-CCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCC
Q 009492          351 MKKVQEELAQVVGM-DSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDP  429 (533)
Q Consensus       351 q~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~  429 (533)
                      |++|++|+.++.+. +..++.+++.+||||.||||||+||||++|+. .|...+|.+++||.|||||.|.++++.+.+||
T Consensus       350 Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~  428 (519)
T KOG0159|consen  350 QQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNP  428 (519)
T ss_pred             HHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccCh
Confidence            99999999999987 67889999999999999999999999999995 69999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCcccccc
Q 009492          430 KLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFG  509 (533)
Q Consensus       430 ~~~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  509 (533)
                      ++|++|++|+|||||+++.     ...++..++|||.|+|+|+||+||++||.++|+.|+++|+++.....  +++..+.
T Consensus       429 ~~F~~p~~F~PeRWL~~~~-----~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~--pv~~~~~  501 (519)
T KOG0159|consen  429 AYFPDPEEFLPERWLKPST-----KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE--PVEYVYR  501 (519)
T ss_pred             hhCCCccccChhhhccccc-----CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC--CccceeE
Confidence            9999999999999997632     24578899999999999999999999999999999999999987653  4555677


Q ss_pred             ceeecCCCeeEeeeecCC
Q 009492          510 IVIKKKEPLVAIPTPRLS  527 (533)
Q Consensus       510 ~~~~~~~~~~~~~~~r~~  527 (533)
                      ++..|..++.+++++|+.
T Consensus       502 ~il~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  502 FILVPNRPLRFKFRPRNE  519 (519)
T ss_pred             EEEcCCCCcceeeeeCCC
Confidence            888899999999999863


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=7.3e-73  Score=563.92  Aligned_cols=444  Identities=19%  Similarity=0.274  Sum_probs=333.6

Q ss_pred             CCCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCc
Q 009492           37 KANATLPPGPRGLPVFGYLPFLG----TTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDP  112 (533)
Q Consensus        37 ~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~  112 (533)
                      +.+.++||||+++|++||+..+.    .+.++.++.++.++||++|+++++++++|+|+||+++++++.+++..|..+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            34445899999999999975432    23577889999999999999999999999999999999999987766654332


Q ss_pred             hhhhhHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHH-hHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHH
Q 009492          113 PKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDA-CYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTL  191 (533)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~  191 (533)
                      .....  ..++.++++ .+|+.|+++||.+. +.|+...++. +.+.+.+.+..+++.+.     .+..+|+.+.+..++
T Consensus       114 ~~~~~--~~g~~~~~~-~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~vd~~~~~~~~~  184 (490)
T PLN02500        114 RSIGG--ILGKWSMLV-LVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK-----ENSTFSAQDEAKKFT  184 (490)
T ss_pred             hHHHH--HhCcccccc-cCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC-----CCCCEEehHHHHHHH
Confidence            22211  123334444 47999999999997 8999999887 56777777777777664     345789999999999


Q ss_pred             HHHHHHHHhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009492          192 VCAIQNMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQH  271 (533)
Q Consensus       192 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  271 (533)
                      ++++++++||.+.+..  ...  .....  +.........  ....+|...       .++..++.+.+.+++.+.++++
T Consensus       185 ~~vi~~~~fg~~~~~~--~~~--~~~~~--~~~~~~~~~~--~~~~~p~~~-------~~~~~~~~~~~~~~~~~~i~~~  249 (490)
T PLN02500        185 FNLMAKHIMSMDPGEE--ETE--QLKKE--YVTFMKGVVS--APLNFPGTA-------YRKALKSRATILKFIERKMEER  249 (490)
T ss_pred             HHHHHHHHhCCCCCch--HHH--HHHHH--HHHHHhhhhc--chhcCCCcc-------cHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999875322  110  00001  1111111100  011123211       1233445667777777777776


Q ss_pred             HhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHH
Q 009492          272 RNKELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVM  351 (533)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q  351 (533)
                      ++.....       .  ......|+++.+++.       ..++++++.+++.++++||+|||+++++|++++|++||++|
T Consensus       250 ~~~~~~~-------~--~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq  313 (490)
T PLN02500        250 IEKLKEE-------D--ESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAV  313 (490)
T ss_pred             HHhhhcc-------c--CCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHH
Confidence            5432110       0  011346899998873       23899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhC-----CCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhh
Q 009492          352 KKVQEELAQVVG-----MDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIH  426 (533)
Q Consensus       352 ~~lr~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~  426 (533)
                      +|+|+|++++++     .+..++.+++++|||++|||+||||++|+++.. +|.+.+|++++||.|||||.|+++++++|
T Consensus       314 ~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~h  392 (490)
T PLN02500        314 QELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVH  392 (490)
T ss_pred             HHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcc
Confidence            999999998863     234578999999999999999999999999984 79999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCcCCCCcCCccc--CCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCc
Q 009492          427 RDPKLWDNPLQFRPERFLDDGIASKFD--YSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNL  504 (533)
Q Consensus       427 ~d~~~~~dp~~F~p~R~l~~~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  504 (533)
                      +||++|+||++||||||++++......  ....+..|+|||+|+|.|+|++||++|+++++++||++|+|+++++... .
T Consensus       393 rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~  471 (490)
T PLN02500        393 LDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-F  471 (490)
T ss_pred             cCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-e
Confidence            999999999999999999652211100  0123568999999999999999999999999999999999998766432 1


Q ss_pred             cccccceeecCCCeeEeeeec
Q 009492          505 SEKFGIVIKKKEPLVAIPTPR  525 (533)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~r  525 (533)
                       ... .+ .++.++.|++++.
T Consensus       472 -~~~-~~-~~~~~l~~~~~~~  489 (490)
T PLN02500        472 -AFP-FV-DFPKGLPIRVRRI  489 (490)
T ss_pred             -ecc-cc-cCCCCceEEEEeC
Confidence             112 22 3345888888763


No 19 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.8e-72  Score=502.85  Aligned_cols=447  Identities=23%  Similarity=0.356  Sum_probs=362.7

Q ss_pred             CCCCCC-CCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHhh
Q 009492           42 LPPGPR-GLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVS  120 (533)
Q Consensus        42 ~ppgp~-~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~  120 (533)
                      .||--+ ++|++|++..+ ++++.++++++++|||+||++.++|+.++++.||+....++++....++............
T Consensus        32 ~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            677754 58999999998 8899999999999999999999999999999999999999998755554433333333334


Q ss_pred             cCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHH-HHhhcccCCCccchhhhHHHHHHHHHHHHH
Q 009492          121 YGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRD-LYNNDNKIGKPIDIGELSFSTLVCAIQNML  199 (533)
Q Consensus       121 ~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~-l~~~~~~~~~~vdl~~~~~~~~~~~i~~~~  199 (533)
                      | |.++++..++....++.+++. ..+....++.+++.|.+++.+.+.. +.+    +|.+-.+..+...+++.+.-..+
T Consensus       111 F-g~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~----s~~~d~l~~~~~~ii~tAs~~ll  184 (486)
T KOG0684|consen  111 F-GKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE----SGETDGLYTFCRLIIFTASRLLL  184 (486)
T ss_pred             c-CCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc----ccchhHhhhhhHHHhhhhHHHhh
Confidence            3 566776666777778778775 8899999999999999999999887 332    56677788888999999888888


Q ss_pred             hcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 009492          200 WGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTVE  279 (533)
Q Consensus       200 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  279 (533)
                      ||+.....+.+.     ...  ..++.  .+...+...||.  +++.. ..++..++++++.+++...+.++++..    
T Consensus       185 ~~e~r~~~d~~~-----a~l--~~dLd--~~F~~~d~~FP~--~LP~~-~~r~~~ra~~~i~k~f~~~i~~rr~s~----  248 (486)
T KOG0684|consen  185 GGEVRDQLDADV-----AKL--YHDLD--QGFQPFDFLFPY--NLPIP-LLRRRDRARKKISKIFSKIILDRRASI----  248 (486)
T ss_pred             hhhhhhhhcchH-----HHH--HHHHh--ccccchHhhccc--CCCcc-hhhhHHHHHHHHHHHHHHHHHHHHhcc----
Confidence            988777652110     011  11111  223344556663  22222 234455888999999999998888765    


Q ss_pred             hhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHHH
Q 009492          280 GEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEELA  359 (533)
Q Consensus       280 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei~  359 (533)
                                .....|.++.+++..+   .+...+++|+.+.++.++|||+.||+.|.+|++++|++|||+++.+++|++
T Consensus       249 ----------s~~~~dmlq~l~~~y~---dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k  315 (486)
T KOG0684|consen  249 ----------SKWDNDMLQSLMEKYK---DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQK  315 (486)
T ss_pred             ----------ccccHHHHHHHHHHhh---cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence                      3355788888888333   256799999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCc-cchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCC----eeeCCCCEEEEcchhhhcCCCCCCC
Q 009492          360 QVVGMDSC-VEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGG----YNIPKDTTIMLNVRAIHRDPKLWDN  434 (533)
Q Consensus       360 ~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g----~~ip~Gt~v~~~~~~~~~d~~~~~d  434 (533)
                      ++++.... ++++++++||+|++||+|||||+||.+.. .|.+.+|.++.+    |.||+|..|++++..+|+||+||+|
T Consensus       316 ~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~d  394 (486)
T KOG0684|consen  316 RVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPD  394 (486)
T ss_pred             HHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCC
Confidence            99987555 99999999999999999999999998885 499999999966    9999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeec
Q 009492          435 PLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKK  514 (533)
Q Consensus       435 p~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  514 (533)
                      |+.|+||||++++.++......-++.|||||+|+|.||||.||.+|||+++..+|++||+++.++ +++-.++..+++.|
T Consensus       395 p~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~~v~~P  473 (486)
T KOG0684|consen  395 PEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSRMVMQP  473 (486)
T ss_pred             hhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHHhhcCC
Confidence            99999999997654332112223456799999999999999999999999999999999999997 45544556668999


Q ss_pred             CCCeeEeeeecC
Q 009492          515 KEPLVAIPTPRL  526 (533)
Q Consensus       515 ~~~~~~~~~~r~  526 (533)
                      +++|++++++|+
T Consensus       474 ~g~v~irYK~R~  485 (486)
T KOG0684|consen  474 EGDVRIRYKRRP  485 (486)
T ss_pred             CCCceEEEeecC
Confidence            999999999996


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.7e-71  Score=549.51  Aligned_cols=429  Identities=20%  Similarity=0.293  Sum_probs=334.0

Q ss_pred             CCCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHh
Q 009492           40 ATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVV  119 (533)
Q Consensus        40 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~  119 (533)
                      +++||||+++|++||+..+ .++.+.++.++.++||++|+++++++++++|+||+.++++++++...|..+.......  
T Consensus        30 ~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~--  106 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD--  106 (463)
T ss_pred             CCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH--
Confidence            3478999999999998766 4456789999999999999999999999999999999999998776664433222221  


Q ss_pred             hcCCcceEecCCChhhHHhhhhhHhhcCChHHHHH-hHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHH
Q 009492          120 SYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDA-CYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNM  198 (533)
Q Consensus       120 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~  198 (533)
                      .+++ +.+++.+|+.|+.+|+++. ++|++..++. +.+.+.+.+.+++++|.     .++++|+.+.+..+++++++.+
T Consensus       107 ~lg~-~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~  179 (463)
T PLN02774        107 ILGT-CNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD-----GLKTIDIQEKTKEMALLSALKQ  179 (463)
T ss_pred             HhCc-cchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC-----CCCCEEeeHHHHHHHHHHHHHH
Confidence            2233 3334557999999999996 8999999986 78888888877777764     3457999999999999999999


Q ss_pred             HhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 009492          199 LWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTV  278 (533)
Q Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  278 (533)
                      +||.+....  .       ..+. ..+...... .+  .+|.  +++. ...++..++.+.+.+++.+.++++++.    
T Consensus       180 ~~g~~~~~~--~-------~~~~-~~~~~~~~~-~~--~~~~--~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~----  239 (463)
T PLN02774        180 IAGTLSKPI--S-------EEFK-TEFFKLVLG-TL--SLPI--DLPG-TNYRSGVQARKNIVRMLRQLIQERRAS----  239 (463)
T ss_pred             HcCCCChHH--H-------HHHH-HHHHHHhcc-cc--cCCc--CCCC-hhhhHHHHHHHHHHHHHHHHHHHHHhc----
Confidence            999764322  1       0111 111111110 00  1121  1111 112344566777888888887776532    


Q ss_pred             hhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHH
Q 009492          279 EGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEEL  358 (533)
Q Consensus       279 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei  358 (533)
                                 .....|+++.+++...   .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       240 -----------~~~~~d~l~~ll~~~~---~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei  305 (463)
T PLN02774        240 -----------GETHTDMLGYLMRKEG---NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEH  305 (463)
T ss_pred             -----------CCCcccHHHHHHhCcc---CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence                       1234699999987432   13358999999999999999999999999999999999999999999999


Q ss_pred             HHhhCC---CCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCCC
Q 009492          359 AQVVGM---DSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNP  435 (533)
Q Consensus       359 ~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  435 (533)
                      +++.+.   +..++.++++++|||+|||+||||++|+++. ++|.+.+|++++||.||||+.|+++++++|+||++|+||
T Consensus       306 ~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP  384 (463)
T PLN02774        306 LAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDP  384 (463)
T ss_pred             HHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCCh
Confidence            999853   3467899999999999999999999999987 469999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeecC
Q 009492          436 LQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKK  515 (533)
Q Consensus       436 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  515 (533)
                      ++|+||||++++  .    . ....|+|||+|+|.|||++||++||+++++.||++|+|++.++.+..  ...  +..|+
T Consensus       385 ~~F~PeRfl~~~--~----~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~--~~~--~~~p~  453 (463)
T PLN02774        385 MTFNPWRWLDKS--L----E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM--KFP--RVEAP  453 (463)
T ss_pred             hccCchhcCCCC--c----C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc--cCC--CCCCC
Confidence            999999999642  1    1 12369999999999999999999999999999999999998764321  122  33367


Q ss_pred             CCeeEeeee
Q 009492          516 EPLVAIPTP  524 (533)
Q Consensus       516 ~~~~~~~~~  524 (533)
                      +++.|++++
T Consensus       454 ~g~~~~~~~  462 (463)
T PLN02774        454 NGLHIRVSP  462 (463)
T ss_pred             CCceEEeee
Confidence            888888873


No 21 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.9e-71  Score=547.27  Aligned_cols=428  Identities=20%  Similarity=0.314  Sum_probs=338.3

Q ss_pred             CCCCCCCCCCCcccccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhH
Q 009492           39 NATLPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALV  118 (533)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~  118 (533)
                      ..+.||||+++|++|++..+...+++.++.+++++||++|+++++++++|+|+||+++++++.++...|....  .....
T Consensus        33 ~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~--~~~~~  110 (463)
T PLN02196         33 KLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTF--PASKE  110 (463)
T ss_pred             CCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccC--chHHH
Confidence            3448999999999999876646689999999999999999999999999999999999999998776664321  11112


Q ss_pred             hhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHH
Q 009492          119 VSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNM  198 (533)
Q Consensus       119 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~  198 (533)
                      ..+++.++ +..+|+.|+++||++. +.|++++++.+.+.+.+.+.++++.|.      ++.+|+.+.+..+++++++.+
T Consensus       111 ~~~g~~~l-~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~------~~~v~~~~~~~~~~~~v~~~~  182 (463)
T PLN02196        111 RMLGKQAI-FFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE------GTQINTYQEMKTYTFNVALLS  182 (463)
T ss_pred             HHcCcccc-cccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC------CCeEEeHHHHHHHHHHHHHHH
Confidence            22333344 4557999999999997 899999999999999999998888763      457899999999999999999


Q ss_pred             HhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 009492          199 LWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTV  278 (533)
Q Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  278 (533)
                      +||.+....  .       ..+  .........  ....+|+.  + +....++..++.+.+.+++.+.++++++.    
T Consensus       183 ~fG~~~~~~--~-------~~~--~~~~~~~~~--~~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~----  242 (463)
T PLN02196        183 IFGKDEVLY--R-------EDL--KRCYYILEK--GYNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQN----  242 (463)
T ss_pred             HcCCCCchH--H-------HHH--HHHHHHHhc--chhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhc----
Confidence            999875321  0       001  111111100  00112221  1 11112344556667777777777665432    


Q ss_pred             hhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHH
Q 009492          279 EGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEEL  358 (533)
Q Consensus       279 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei  358 (533)
                                 .....|+++.+++.      +..++++++.++++++++||+|||+.+++|++++|++||++|+|+++|+
T Consensus       243 -----------~~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei  305 (463)
T PLN02196        243 -----------GSSHNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQ  305 (463)
T ss_pred             -----------CCCcccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence                       11346899888853      2358999999999999999999999999999999999999999999999


Q ss_pred             HHhhCC---CCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCCC
Q 009492          359 AQVVGM---DSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNP  435 (533)
Q Consensus       359 ~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  435 (533)
                      +++.+.   ++.++.++++++|||+|||+||||++|+++.. .|.+.+|++++||.|||||.|+++++++|+||++|+||
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP  384 (463)
T PLN02196        306 MAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDP  384 (463)
T ss_pred             HHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCc
Confidence            988753   35688999999999999999999999999986 59999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeecC
Q 009492          436 LQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKK  515 (533)
Q Consensus       436 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  515 (533)
                      ++|+||||+++         ..+..|+|||+|+|.|+|++||++|++++++.|+++|+|+++++. .++.  +..+..|+
T Consensus       385 ~~F~PeRfl~~---------~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~  452 (463)
T PLN02196        385 GKFDPSRFEVA---------PKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGIQ--YGPFALPQ  452 (463)
T ss_pred             CccChhhhcCC---------CCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-CceE--EcccccCC
Confidence            99999999953         124589999999999999999999999999999999999987652 2332  34445578


Q ss_pred             CCeeEeeeecC
Q 009492          516 EPLVAIPTPRL  526 (533)
Q Consensus       516 ~~~~~~~~~r~  526 (533)
                      ..+.|++++++
T Consensus       453 ~~~~~~~~~~~  463 (463)
T PLN02196        453 NGLPIALSRKP  463 (463)
T ss_pred             CCceEEEecCC
Confidence            88889888653


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.5e-72  Score=563.07  Aligned_cols=456  Identities=33%  Similarity=0.560  Sum_probs=360.5

Q ss_pred             CCCCCCCcccccccCCC-CCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhH--h
Q 009492           43 PPGPRGLPVFGYLPFLG-TTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALV--V  119 (533)
Q Consensus        43 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~--~  119 (533)
                      ||||+++|++||+..+. .+++++++.++++|||+||+++++++++++|+||+.+++|+.++...++.+........  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999884 36789999999999999999999999999999999999999998766665433222221  2


Q ss_pred             hcCCcceEecCCChhhHHhhhhhHhhcCChH-HHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHH
Q 009492          120 SYGGNDIAWSNYGPEWRKLRKFFVGKMMNNE-SLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNM  198 (533)
Q Consensus       120 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~-~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~  198 (533)
                      ...+.++++. +|+.|+.+|+.+. +.|+.. .+ .+.+.+.+.+..+++.+..... .++.+|+.+++..+++++++.+
T Consensus        81 ~~~~~~l~~~-~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~d~i~~~  156 (463)
T PF00067_consen   81 PFGGKGLFFS-DGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAG-SSGPVDLFDWLRRFALDVIGRV  156 (463)
T ss_dssp             HHTTTSSTTS-SHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTT-SESEEEHHHHHHHHHHHHHHHH
T ss_pred             cccccccccc-ccccccccccccc-ccccccccc-cccccccccccccccccccccc-ccceeeeecccccccccccccc
Confidence            3345555544 5799999999997 777777 66 8999999999999999988765 3347999999999999999999


Q ss_pred             HhcchhhhhhccccchhhhhhhHHHHHHHHhcC--CccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009492          199 LWGEALELKEKGTTNLRAGLKFKLAELMVLAGT--PNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKEL  276 (533)
Q Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  276 (533)
                      +||.+++..  ........... +..+......  ..+...+|++.++ +....+...++.+.+..+++..++++++...
T Consensus       157 ~fG~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (463)
T PF00067_consen  157 LFGKDFGSL--DDEDFEEFLEA-FDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELD  232 (463)
T ss_dssp             HHSSHHHGT--THHHHHHHHHH-HHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred             cccceeeec--ccccccccccc-ccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence            999998754  21100111111 2233222211  1233455655544 3345566777788888899988888877652


Q ss_pred             chhhhhhhccCCCCCCcchHHHHHHHhc-cCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHH
Q 009492          277 TVEGEERAGKNFEGSRNKNFLQLLLELQ-ENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQ  355 (533)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr  355 (533)
                      ..           .....|+++.+++.. +.. .+..++++++.++++.+++||+|||+.+++|++++|++||++|++++
T Consensus       233 ~~-----------~~~~~d~l~~ll~~~~~~~-~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~  300 (463)
T PF00067_consen  233 DG-----------DESRRDLLDSLLQASSDSD-GPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLR  300 (463)
T ss_dssp             SS-----------SSSCSSHHHHHHHHHHTTT-TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             cc-----------ccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            11           236789999999986 221 12479999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCCC
Q 009492          356 EELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNP  435 (533)
Q Consensus       356 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  435 (533)
                      +||+++.+++..++.+++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++++++|+||++|+||
T Consensus       301 ~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp  380 (463)
T PF00067_consen  301 EEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDP  380 (463)
T ss_dssp             HHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSST
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999997667889999999999999999999999999965789999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeecC
Q 009492          436 LQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKK  515 (533)
Q Consensus       436 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  515 (533)
                      ++|+||||++++.    .....+..|+|||.|+|.|||++||++|+++++++||++|||++.++..............++
T Consensus       381 ~~F~P~R~~~~~~----~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  456 (463)
T PF00067_consen  381 DEFDPERFLDERG----ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPP  456 (463)
T ss_dssp             TS--TTGGBTTTS----TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEE
T ss_pred             ccccccccccccc----ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeC
Confidence            9999999997632    112356689999999999999999999999999999999999997664443333332333444


Q ss_pred             CCeeEee
Q 009492          516 EPLVAIP  522 (533)
Q Consensus       516 ~~~~~~~  522 (533)
                      .+++|++
T Consensus       457 ~~~~~~~  463 (463)
T PF00067_consen  457 KPLKVKF  463 (463)
T ss_dssp             SSSEEEE
T ss_pred             CCcEEeC
Confidence            5677764


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.5e-70  Score=550.58  Aligned_cols=452  Identities=24%  Similarity=0.391  Sum_probs=337.1

Q ss_pred             ccccCCCCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHhhcCCcceEecCCC
Q 009492           53 GYLPFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYG  132 (533)
Q Consensus        53 G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  132 (533)
                      |++..+.+..++..+.+|++||||||++++|+.++++|+||+.+++|+.++...|..+.......  ...+.+++ ..+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~--~~~g~~l~-~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILE--FVMGKGLI-PADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHh--hccCCcee-cCCc
Confidence            44444445568899999999999999999999999999999999999998766666543321111  11244544 5679


Q ss_pred             hhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHHHhcchhhhhhcccc
Q 009492          133 PEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTT  212 (533)
Q Consensus       133 ~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~  212 (533)
                      +.|+.+|+.+. +.|+...++.+.+.+.+.+..+++.+.+... .+..+|+...+..+++|+|+.++||.+++....+. 
T Consensus       220 e~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~-~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~-  296 (633)
T PLN02738        220 EIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAAS-DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDT-  296 (633)
T ss_pred             HHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccch-
Confidence            99999999997 9999999999999999999999999976543 57789999999999999999999999987542111 


Q ss_pred             chhhhhhhH--HHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhccCCCC
Q 009492          213 NLRAGLKFK--LAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEG  290 (533)
Q Consensus       213 ~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  290 (533)
                        .....+.  +...............+|.+..+  ....++..+..+.+...++..++.+++....... ... .....
T Consensus       297 --~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~-~~~-~~~~~  370 (633)
T PLN02738        297 --GIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEEL-QFH-EEYMN  370 (633)
T ss_pred             --HHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cch-hcccc
Confidence              0001111  11111111111111112222211  1112334444555555555555543322110000 000 00001


Q ss_pred             CCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHHHHhhCCCCccch
Q 009492          291 SRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEE  370 (533)
Q Consensus       291 ~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~  370 (533)
                      ....|+++.|++..      ..++++++.+++..+++||+||||.+++|++++|++||++|+|||+|++++++ +..++.
T Consensus       371 ~~~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~  443 (633)
T PLN02738        371 ERDPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTI  443 (633)
T ss_pred             cccchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCH
Confidence            23468999998753      24899999999999999999999999999999999999999999999999987 466799


Q ss_pred             hhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCCCCCCCCCCcCCCCcCC
Q 009492          371 FHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIAS  450 (533)
Q Consensus       371 ~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~l~~~~~~  450 (533)
                      +++++||||+|||+|+||++|+++.. +|++.+|.+++||.||+||.|.++++.+|+||++|+||++|+||||+.++.+.
T Consensus       444 edL~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~  522 (633)
T PLN02738        444 EDMKKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP  522 (633)
T ss_pred             HHHccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc
Confidence            99999999999999999999999995 69999999999999999999999999999999999999999999998531111


Q ss_pred             cccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeecCCCeeEeeeecCC
Q 009492          451 KFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPLVAIPTPRLS  527 (533)
Q Consensus       451 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  527 (533)
                        .....+..|+|||.|+|.|+|++||++|++++++.|+++|+|++.++.+ +.....+.+..++.+++|++++|.+
T Consensus       523 --~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        523 --NETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             --cccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCC
Confidence              1122455899999999999999999999999999999999999976632 2333345677778899999999944


No 24 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=9e-70  Score=545.27  Aligned_cols=460  Identities=19%  Similarity=0.270  Sum_probs=333.1

Q ss_pred             CCCCCCCCcccccccCCCCCChhHHHHHHHhhc---CCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhH
Q 009492           42 LPPGPRGLPVFGYLPFLGTTDLHKKFTELSGVY---GPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALV  118 (533)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~  118 (533)
                      .+|||+++|++||+..+.. + +..+.+|.++|   |++|++++++.++++++||+.+++|+.++...|.......... 
T Consensus        31 ~~pgp~~~p~~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~-  107 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLK-N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM-  107 (516)
T ss_pred             ccCCCCCCCeecchHHHHh-c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH-
Confidence            3689999999999865422 2 33456666677   8999999999999999999999999987644554432221111 


Q ss_pred             hhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHH-HHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHH
Q 009492          119 VSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALR-KQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQN  197 (533)
Q Consensus       119 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~  197 (533)
                      ..+.+.++ ++.+|+.|+++||.++ +.|+..+++.+.+.+ .+.+..+.+.+..... .+.++|+.+++..+++|+++.
T Consensus       108 ~~~~g~~l-~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~dvi~~  184 (516)
T PLN03195        108 EVLLGDGI-FNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASF-ANQVVDMQDLFMRMTLDSICK  184 (516)
T ss_pred             HHHhcCee-eccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCeEcHHHHHHHHHHHHHHH
Confidence            11224554 4567999999999997 899999999999876 4445556655654322 466899999999999999999


Q ss_pred             HHhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009492          198 MLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELT  277 (533)
Q Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  277 (533)
                      ++||.+++..+...........  ++..........+ ..++.+..+......+...+..+.+.+++.+.++++++....
T Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        185 VGFGVEIGTLSPSLPENPFAQA--FDTANIIVTLRFI-DPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             HHhCCCccccccCCCccHHHHH--HHHHHHHHHHHHh-cchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999988754211100000011  1111111000000 001111110001112333455666777777777766543211


Q ss_pred             hhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHH
Q 009492          278 VEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEE  357 (533)
Q Consensus       278 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~E  357 (533)
                      .       .........|+++.+++...+  .+..++++++.+++.++++||+|||+.+++|++++|++||++|+|+|+|
T Consensus       262 ~-------~~~~~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~E  332 (516)
T PLN03195        262 A-------RKSGKKVKHDILSRFIELGED--PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSE  332 (516)
T ss_pred             c-------ccccccccccHHHHHHhccCC--CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            0       000012356899999975433  2346999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCC--------------------CCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCccc-CCeeeCCCC
Q 009492          358 LAQVVGM--------------------DSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNI-GGYNIPKDT  416 (533)
Q Consensus       358 i~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l-~g~~ip~Gt  416 (533)
                      +++++++                    ++.++.+++++||||+|||+||||++|++|.. +|.+.+|..+ +||.|||||
T Consensus       333 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt  411 (516)
T PLN03195        333 LKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGG  411 (516)
T ss_pred             HHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCC
Confidence            9988642                    23578899999999999999999999999996 5667676555 999999999


Q ss_pred             EEEEcchhhhcCCCCC-CCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceee
Q 009492          417 TIMLNVRAIHRDPKLW-DNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWE  495 (533)
Q Consensus       417 ~v~~~~~~~~~d~~~~-~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~  495 (533)
                      .|.++++++|+||++| +||++|+||||++++  ..  ....++.|+|||+|+|.|+|++||++|++++++.|+++|+++
T Consensus       412 ~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~--~~--~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~  487 (516)
T PLN03195        412 MVTYVPYSMGRMEYNWGPDAASFKPERWIKDG--VF--QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQ  487 (516)
T ss_pred             EEEEehHhhccChhhhccChhhcCCcccCCCC--Cc--CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeE
Confidence            9999999999999999 999999999999531  10  012345799999999999999999999999999999999999


Q ss_pred             cCCCCCcCccccccceeecCCCeeEeeeecC
Q 009492          496 LPTGTKLNLSEKFGIVIKKKEPLVAIPTPRL  526 (533)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                      ++++.+..  .....+..++.+++|++++|+
T Consensus       488 ~~~~~~~~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        488 LVPGHPVK--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             ecCCCcce--eeeeeEEecCCCEEEEEEeCC
Confidence            87654332  233456678889999999884


No 25 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1e-69  Score=539.14  Aligned_cols=452  Identities=19%  Similarity=0.310  Sum_probs=333.9

Q ss_pred             CCCCCCCCcccccccCCCCC--ChhHHHHHHHhhcCCeEE---EecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhh
Q 009492           42 LPPGPRGLPVFGYLPFLGTT--DLHKKFTELSGVYGPIFK---LWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAA  116 (533)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~---~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~  116 (533)
                      ..|||+++|++|++..+...  ..++++.++..+||..++   .++|+.++++|+||+.+++|+.++...|..+......
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            35888999999998655322  345555565566886665   5778999999999999999999876666654332211


Q ss_pred             hHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHH--hHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHH
Q 009492          117 LVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDA--CYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCA  194 (533)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~--~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~  194 (533)
                        ....|++++++ +|+.|+++||.++ |.|+...+..  +.+.+.+.+..+++.+.+... ++..+|+.+.+..+++|+
T Consensus       112 --~~~~g~gl~~~-~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        112 --FDVLGEGILTV-DFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAH-ENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             --HHhhcCccccc-CcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCeEeHHHHHHHHHHHH
Confidence              22235666655 6999999999997 9999887764  235666777777777765433 567899999999999999


Q ss_pred             HHHHHhcchhhhhhccccchhhhhhhH--HHHHHHHhcCCccccccccccc----cchhhHHHHHHHHHHHHHHHHHHHH
Q 009492          195 IQNMLWGEALELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLSW----LDIQGIERRAKKISLWLDNVINSTV  268 (533)
Q Consensus       195 i~~~~fG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~~~~~~~~~i  268 (533)
                      ++.++||.+.+..+...  ..  ..+.  .........   .....|++.+    +...+..++..++.+.+..++++.+
T Consensus       187 i~~~~fG~~~~~~~~~~--~~--~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I  259 (500)
T PLN02169        187 SSILMTGYDPMSLSIEM--LE--VEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKII  259 (500)
T ss_pred             HHhheeCCCccccCCCC--CC--CHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHH
Confidence            99999999775431110  00  1111  111111110   0112232111    1012234566778888888888888


Q ss_pred             HHHHhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCCC-CCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhC
Q 009492          269 EQHRNKELTVEGEERAGKNFEGSRNKNFLQLLLELQENDD-SASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQH  347 (533)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~  347 (533)
                      +++++.....      +.  ......|+++.+++...+.. .+..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       260 ~~r~~~~~~~------~~--~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~  331 (500)
T PLN02169        260 SSRRKEEISR------AE--TEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKH  331 (500)
T ss_pred             HHHHHHhhcc------cc--ccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCC
Confidence            8776532100      00  01124689999987643210 123478999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcc-cCCeeeCCCCEEEEcchhhh
Q 009492          348 PQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSN-IGGYNIPKDTTIMLNVRAIH  426 (533)
Q Consensus       348 p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~-l~g~~ip~Gt~v~~~~~~~~  426 (533)
                      |++|+|+++||++++      +.+++.+||||+|||+||||++|++|... |.+.+|.. ++||.|||||.|.++++++|
T Consensus       332 Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ih  404 (500)
T PLN02169        332 PQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALG  404 (500)
T ss_pred             HHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhh
Confidence            999999999998764      57899999999999999999999999965 66666555 59999999999999999999


Q ss_pred             cCCCCC-CCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCcc
Q 009492          427 RDPKLW-DNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLS  505 (533)
Q Consensus       427 ~d~~~~-~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~  505 (533)
                      |||++| +||++||||||++++....   ...+.+|+|||+|+|.|+|++||++|+++++++||++|+|+++++.++  .
T Consensus       405 rd~~~w~~dP~~F~PeRfl~~~~~~~---~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~  479 (500)
T PLN02169        405 RMRSVWGEDALDFKPERWISDNGGLR---HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--E  479 (500)
T ss_pred             CCccccCCChhhcCccccCCCCCCcc---CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--c
Confidence            999999 8999999999996421110   113568999999999999999999999999999999999999765433  3


Q ss_pred             ccccceeecCCCeeEeeeec
Q 009492          506 EKFGIVIKKKEPLVAIPTPR  525 (533)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~r  525 (533)
                      ...+++..+++++.+++++|
T Consensus       480 ~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        480 AIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             cccceEEecCCCEEEEEEeC
Confidence            34567788899999999987


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.4e-69  Score=531.94  Aligned_cols=437  Identities=19%  Similarity=0.255  Sum_probs=335.9

Q ss_pred             CCCCCCCCCCcccccccCCC----CCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhh
Q 009492           40 ATLPPGPRGLPVFGYLPFLG----TTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKA  115 (533)
Q Consensus        40 ~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~  115 (533)
                      +.+||||+++|++|+++.+.    ..+++.++.++.++||+||+++++++++|+|+||+++++++.+++..|..+.....
T Consensus         6 ~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~~   85 (452)
T PLN03141          6 SRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKSL   85 (452)
T ss_pred             CCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchhH
Confidence            34799999999999987762    24688999999999999999999999999999999999999988777765532222


Q ss_pred             hhHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHH-hHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHH
Q 009492          116 ALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDA-CYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCA  194 (533)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~  194 (533)
                      ..  .+ |.+.++..+|+.|+++|+++. +.|+...+.. +.+.+.+.+.++++.+.     .+..+|+.+.+..+++++
T Consensus        86 ~~--l~-g~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v  156 (452)
T PLN03141         86 TE--LM-GKSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR-----DDPPVLVQDETKKIAFEV  156 (452)
T ss_pred             HH--Hh-CcccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc-----CCCCEEhHHHHHHHHHHH
Confidence            11  12 333345557999999999997 7787777765 35556666655555542     456789999999999999


Q ss_pred             HHHHHhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009492          195 IQNMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNK  274 (533)
Q Consensus       195 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  274 (533)
                      +++++||.+....  ..   .....  +.........  +...+|..       ...+..++.+.+.+++...+++++..
T Consensus       157 i~~~~~G~~~~~~--~~---~~~~~--~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        157 LVKALISLEPGEE--ME---FLKKE--FQEFIKGLMS--LPIKLPGT-------RLYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             HHHHHcCCCchHH--HH---HHHHH--HHHHhhhHHh--CccCCCch-------HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999765322  10   00011  1111111111  10111211       11233456778888888888877654


Q ss_pred             hcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHH
Q 009492          275 ELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKV  354 (533)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~l  354 (533)
                      ....       .........|+++.+++..     +..++++++.+++.++++||+|||+.+++|++++|++||++|+++
T Consensus       221 ~~~~-------~~~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl  288 (452)
T PLN03141        221 MKNK-------EEDETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQL  288 (452)
T ss_pred             Hhcc-------CccccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHH
Confidence            3110       0000112468999988753     245899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhC----CCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCC
Q 009492          355 QEELAQVVG----MDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPK  430 (533)
Q Consensus       355 r~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~  430 (533)
                      ++|++++.+    .+..++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++++++|+|++
T Consensus       289 ~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~  367 (452)
T PLN03141        289 TEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEE  367 (452)
T ss_pred             HHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCch
Confidence            999988753    23457889999999999999999999999986 5799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccc
Q 009492          431 LWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGI  510 (533)
Q Consensus       431 ~~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  510 (533)
                      +|+||++|+||||++++        ..+..|+|||+|+|.|+|++||++|+++++++|+++|+|+++++...     ...
T Consensus       368 ~~~dP~~F~PeRfl~~~--------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~  434 (452)
T PLN03141        368 NYDNPYQFNPWRWQEKD--------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFP  434 (452)
T ss_pred             hcCCccccCcccccCCC--------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecc
Confidence            99999999999999641        13458999999999999999999999999999999999998766321     124


Q ss_pred             eeecCCCeeEeeeecCC
Q 009492          511 VIKKKEPLVAIPTPRLS  527 (533)
Q Consensus       511 ~~~~~~~~~~~~~~r~~  527 (533)
                      +..++.++.|++++|.+
T Consensus       435 ~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        435 TVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             cccCCCCceEEEEeCCC
Confidence            66778899999999954


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1e-68  Score=526.77  Aligned_cols=450  Identities=21%  Similarity=0.287  Sum_probs=338.7

Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHH
Q 009492           23 LAVVYFAWNVKKSRKANATLPPGPRGLPVFGYLPFLG----TTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQ   98 (533)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~   98 (533)
                      +.+++++|+.+.. .....+||||.++|++|++..+.    ..+++.++.++.++||++|+++++++++|+|+||+++++
T Consensus        13 ~~~~~~~~~~~~~-~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~   91 (472)
T PLN02987         13 LAAIFFLLLRRTR-YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRF   91 (472)
T ss_pred             HHHHHHHHHHhhc-cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHH
Confidence            3334444544433 33334899999999999987652    246888999999999999999999999999999999999


Q ss_pred             HHHhCCcccCCCCchhhhhHhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCC
Q 009492           99 VVRDQDTTFANRDPPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIG  178 (533)
Q Consensus        99 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~  178 (533)
                      ++.++...|..+.......  .+++.+++++ +|+.|+++|+++. ++++...++.+..   .++.++++......   .
T Consensus        92 il~~~~~~f~~~~~~~~~~--~lg~~~l~~~-~g~~wr~~R~~~~-~f~~~~~~~~~~~---~~~~~~~~~~~~~~---~  161 (472)
T PLN02987         92 ILQNEGKLFECSYPGSISN--LLGKHSLLLM-KGNLHKKMHSLTM-SFANSSIIKDHLL---LDIDRLIRFNLDSW---S  161 (472)
T ss_pred             HHhCCCceEEecCcHHHHH--HhCccccccc-CcHHHHHHHHHHH-HhcChHHHHHHHH---HHHHHHHHHHHHhh---c
Confidence            9998877775443222222  2244455555 7999999999976 6555555554331   22333333322211   1


Q ss_pred             CccchhhhHHHHHHHHHHHHHhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHH
Q 009492          179 KPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISL  258 (533)
Q Consensus       179 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~  258 (533)
                      +++++.+.+..++++++++++||.+....  ..   .....+  .......    +...+|++.     ...++..+..+
T Consensus       162 ~~v~~~~~~~~~t~~vi~~~~fg~~~~~~--~~---~~~~~~--~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~  225 (472)
T PLN02987        162 SRVLLMEEAKKITFELTVKQLMSFDPGEW--TE---SLRKEY--VLVIEGF----FSVPLPLFS-----TTYRRAIQART  225 (472)
T ss_pred             cceehHHHHHHHHHHHHHHHHcCCCChHH--HH---HHHHHH--HHHHhhh----hcCCCcCCC-----chHHHHHHHHH
Confidence            36899999999999999999999765422  10   000111  1111111    112234431     12355667788


Q ss_pred             HHHHHHHHHHHHHHhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHH
Q 009492          259 WLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVE  338 (533)
Q Consensus       259 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~  338 (533)
                      .+.+++.+.++++++.....           .....|+++.+++..      ..++++++.+++.++++||+|||+.+++
T Consensus       226 ~~~~~~~~~i~~r~~~~~~~-----------~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~  288 (472)
T PLN02987        226 KVAEALTLVVMKRRKEEEEG-----------AEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMT  288 (472)
T ss_pred             HHHHHHHHHHHHHHhhhhcc-----------CcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHH
Confidence            88888888888776543110           123579999999753      2489999999999999999999999999


Q ss_pred             HHHHHHhhChHHHHHHHHHHHHhhCC---CCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCC
Q 009492          339 WTMAELMQHPQVMKKVQEELAQVVGM---DSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKD  415 (533)
Q Consensus       339 ~~l~~L~~~p~~q~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~G  415 (533)
                      |++++|++||++|+++++|++++.+.   +..++.+++.++||++|||+||||++|+++. ++|.+.+|++++||.||+|
T Consensus       289 ~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~G  367 (472)
T PLN02987        289 LAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKG  367 (472)
T ss_pred             HHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCC
Confidence            99999999999999999999988742   3457889999999999999999999999986 5799999999999999999


Q ss_pred             CEEEEcchhhhcCCCCCCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceee
Q 009492          416 TTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWE  495 (533)
Q Consensus       416 t~v~~~~~~~~~d~~~~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~  495 (533)
                      |.|+++++++|+||++|+||++||||||++++..     ...+..++|||+|+|.|||++||++|++++++.|+++|+++
T Consensus       368 t~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~  442 (472)
T PLN02987        368 WKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-----TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWV  442 (472)
T ss_pred             CEEEEehHHhhCCcccCCCccccCcccCCCCCCC-----CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEE
Confidence            9999999999999999999999999999964211     11235799999999999999999999999999999999999


Q ss_pred             cCCCCCcCccccccceeecCCCeeEeeeecC
Q 009492          496 LPTGTKLNLSEKFGIVIKKKEPLVAIPTPRL  526 (533)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                      ++++.+..    +..+..|.+++.+++++|.
T Consensus       443 ~~~~~~~~----~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        443 PAEQDKLV----FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             ECCCCcee----ecccccCCCCceEEEEecc
Confidence            98764322    2347778888999999983


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=5.5e-68  Score=531.60  Aligned_cols=440  Identities=22%  Similarity=0.336  Sum_probs=340.2

Q ss_pred             CCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHhhcCC--eEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCC
Q 009492           38 ANATLPPGPRGLPVFGYLPFLG----TTDLHKKFTELSGVYGP--IFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRD  111 (533)
Q Consensus        38 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~  111 (533)
                      ...++||||+++|++|++..+.    ..+++.++.++++|||+  +|++++++.++|+++||+.+++++++++ .|..+.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCC
Confidence            3345899999999999987652    34688899999999997  7999999999999999999999998763 454433


Q ss_pred             chhhhhHhhcCCcceEecCCChhhHHhhhhhHhhcC-ChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHH
Q 009492          112 PPKAALVVSYGGNDIAWSNYGPEWRKLRKFFVGKMM-NNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFST  190 (533)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~-~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~  190 (533)
                      ......  .+ |.+.+...+|+.|+++|+.+. +.| +.+.++.+.+.+.+.+..+++.+.     .++.+|+.+.+..+
T Consensus       118 ~~~~~~--~~-g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~-----~~~~v~~~~~~~~~  188 (490)
T PLN02302        118 PESTVE--LI-GRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWS-----KMGEIEFLTELRKL  188 (490)
T ss_pred             chhHHH--Hh-ccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhc-----CCCCEehHHHHHHH
Confidence            322212  22 333444557999999999997 666 578899999999999999998875     23469999999999


Q ss_pred             HHHHHHHHHhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009492          191 LVCAIQNMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQ  270 (533)
Q Consensus       191 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  270 (533)
                      +++++++++||.++...  ..   .....+  .........  +...+|..       ..++..++.+.+.+++.+.+++
T Consensus       189 ~~~vi~~~~~G~~~~~~--~~---~~~~~~--~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~  252 (490)
T PLN02302        189 TFKIIMYIFLSSESELV--ME---ALEREY--TTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDE  252 (490)
T ss_pred             HHHHHHHHHcCCCChHH--HH---HHHHHH--HHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876433  11   000111  111100000  00112211       1123334556677777777776


Q ss_pred             HHhhhcchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHH
Q 009492          271 HRNKELTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQV  350 (533)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~  350 (533)
                      +++.....       .   .....|+++.+++..++  .+..++++++.+++..+++||+|||+.+++|++++|++||++
T Consensus       253 ~~~~~~~~-------~---~~~~~d~l~~ll~~~~~--~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~  320 (490)
T PLN02302        253 RRNSRKQN-------I---SPRKKDMLDLLLDAEDE--NGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEV  320 (490)
T ss_pred             HHHhhhcc-------C---CCCcCCHHHHHHhhhcc--CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHH
Confidence            65432110       0   12457999999986543  234589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCC----CccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhh
Q 009492          351 MKKVQEELAQVVGMD----SCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIH  426 (533)
Q Consensus       351 q~~lr~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~  426 (533)
                      |+|+++|++++++..    ..++.+++++||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++|
T Consensus       321 ~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~  399 (490)
T PLN02302        321 LQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVH  399 (490)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhc
Confidence            999999999988632    1278899999999999999999999999985 69999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccc
Q 009492          427 RDPKLWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSE  506 (533)
Q Consensus       427 ~d~~~~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~  506 (533)
                      +||++|+||++|+||||++++        ..+..|+|||+|+|.|+|++||.+|+++++++|+++||+++.++. .++. 
T Consensus       400 rd~~~~~dP~~F~PeR~~~~~--------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~-  469 (490)
T PLN02302        400 MDPEVYPNPKEFDPSRWDNYT--------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM-  469 (490)
T ss_pred             CCcccCCCccccChhhcCCCC--------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce-
Confidence            999999999999999999531        134579999999999999999999999999999999999987652 2222 


Q ss_pred             cccceeecCCCeeEeeeecCC
Q 009492          507 KFGIVIKKKEPLVAIPTPRLS  527 (533)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~r~~  527 (533)
                       ...+..|+.++.+++++|.+
T Consensus       470 -~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        470 -YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             -eCCCCCCCCCceEEEEeccC
Confidence             23346677788999998854


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=2.2e-67  Score=522.77  Aligned_cols=458  Identities=23%  Similarity=0.351  Sum_probs=347.1

Q ss_pred             CCCCCCCCcccccccCC----CCCChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhh
Q 009492           42 LPPGPRGLPVFGYLPFL----GTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAAL  117 (533)
Q Consensus        42 ~ppgp~~~p~~G~~~~~----~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~  117 (533)
                      +-.|..++|++|..+.+    .+...+..+.+|+++||+||++++++.++++++||+++++|+++.+..|..+.......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            56788999999986643    24568999999999999999999999999999999999999988666676554322111


Q ss_pred             HhhcCCcceEecCCChhhHHhhhhhHhhcCChHHHHHhHH-HHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHH
Q 009492          118 VVSYGGNDIAWSNYGPEWRKLRKFFVGKMMNNESLDACYA-LRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQ  196 (533)
Q Consensus       118 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~  196 (533)
                        .+.+.+++ ..+|+.|+++||.+. +.|+..++..+.+ .+.+++..+++.+.+... ++.++|+.+.+..+++++++
T Consensus        93 --~~~~~~i~-~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~g~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         93 --FLFGSGFA-IAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL-SGEAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             --HHhcCccc-cCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHH
Confidence              11245554 457999999999997 8999888888755 678888999999876543 46789999999999999999


Q ss_pred             HHHhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009492          197 NMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPML-----SWLDIQGIERRAKKISLWLDNVINSTVEQH  271 (533)
Q Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  271 (533)
                      .++||.+++..+...   .. ... +...+..... .....+|++     .++  .+..++..++.+.+.+.+.+.++++
T Consensus       168 ~~~fG~~~~~~~~~~---~~-~~~-~~~~~~~~~~-~~~~~~p~~~~~~l~~~--~p~~~~~~~~~~~i~~~~~~~i~~~  239 (489)
T PLN02936        168 LSVFNYNFDSLTTDS---PV-IQA-VYTALKEAET-RSTDLLPYWKVDFLCKI--SPRQIKAEKAVTVIRETVEDLVDKC  239 (489)
T ss_pred             HHHcCCCccccccCc---HH-HHH-HHHHHHHHHH-hhhccchHHhhHHHhcc--ChhhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987542111   10 111 1111111110 111122321     111  1123455666777778888777766


Q ss_pred             Hhhhcchhhhhhhc-cCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHH
Q 009492          272 RNKELTVEGEERAG-KNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQV  350 (533)
Q Consensus       272 ~~~~~~~~~~~~~~-~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~  350 (533)
                      ++.....  ..... .....+...|+++.|++..+      .++++++.+++.++++||+||||.+++|++++|++||++
T Consensus       240 ~~~~~~~--~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~  311 (489)
T PLN02936        240 KEIVEAE--GEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEA  311 (489)
T ss_pred             HHHHhhc--ccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHH
Confidence            5432100  00000 00001234789999987532      388999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCC
Q 009492          351 MKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPK  430 (533)
Q Consensus       351 q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~  430 (533)
                      |+++|+|++++++. ..++++++++||||+|||+||||++|+++...+|.+.+|+.++||.||+||.|+++.+++|+||+
T Consensus       312 ~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~  390 (489)
T PLN02936        312 LRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPE  390 (489)
T ss_pred             HHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChh
Confidence            99999999999874 45789999999999999999999999999987777778888899999999999999999999999


Q ss_pred             CCCCCCCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccc
Q 009492          431 LWDNPLQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGI  510 (533)
Q Consensus       431 ~~~dp~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  510 (533)
                      +|+||++|+||||++++...  .....+..|+|||.|+|.|||++||++|+++++++|+++|+++++++.++.  ...++
T Consensus       391 ~~~dP~~F~PeRwl~~~~~~--~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~  466 (489)
T PLN02936        391 VWERAEEFVPERFDLDGPVP--NETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIV--MTTGA  466 (489)
T ss_pred             hCCCccccCccccCCCCCCc--cccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccc--eecce
Confidence            99999999999999642111  112234589999999999999999999999999999999999988764432  23445


Q ss_pred             eeecCCCeeEeeeec
Q 009492          511 VIKKKEPLVAIPTPR  525 (533)
Q Consensus       511 ~~~~~~~~~~~~~~r  525 (533)
                      +..++.+++|++++|
T Consensus       467 ~~~~~~~~~v~~~~R  481 (489)
T PLN02936        467 TIHTTNGLYMTVSRR  481 (489)
T ss_pred             EEeeCCCeEEEEEee
Confidence            666777888888877


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=6.1e-65  Score=504.04  Aligned_cols=439  Identities=19%  Similarity=0.265  Sum_probs=328.8

Q ss_pred             CcccccccCCCCCChhHHHHHHHhhcC-CeEEEecCCeeEEEecCHHHHHHHHHhCCcccCCCCchhhhhHhhcCCcceE
Q 009492           49 LPVFGYLPFLGTTDLHKKFTELSGVYG-PIFKLWLGNKLCVVVSSPSLIRQVVRDQDTTFANRDPPKAALVVSYGGNDIA  127 (533)
Q Consensus        49 ~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (533)
                      .++.|+...... +.++++..+.++++ .+++++.++.  ++++||+.+++++..+...|........... ...|++++
T Consensus        49 ~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~-~~~g~gi~  124 (502)
T PLN02426         49 AYLTASWAKDFD-NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILG-DLLGRGIF  124 (502)
T ss_pred             CCccHHHHHhcc-cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHH-HhcCCcee
Confidence            557788765423 46777777888887 5778776554  8999999999999987656654433221111 12356654


Q ss_pred             ecCCChhhHHhhhhhHhhcCChHHHHHhH--HHHHHHHHHHHHHHHhhcc-cCCCccchhhhHHHHHHHHHHHHHhcchh
Q 009492          128 WSNYGPEWRKLRKFFVGKMMNNESLDACY--ALRKQEVKNTIRDLYNNDN-KIGKPIDIGELSFSTLVCAIQNMLWGEAL  204 (533)
Q Consensus       128 ~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~--~~~~~~~~~~l~~l~~~~~-~~~~~vdl~~~~~~~~~~~i~~~~fG~~~  204 (533)
                       +.+|+.|+++||+++ +.|+...++.+.  +.+.+....++..+..... ..+.++|+.+++..+++|+++.++||.++
T Consensus       125 -~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        125 -NVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             -ecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence             457999999999997 999999998864  5666666677777765432 13467999999999999999999999988


Q ss_pred             hhhhccccchhhhhhhH--HHHHHHHhcCCcccccccccc----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 009492          205 ELKEKGTTNLRAGLKFK--LAELMVLAGTPNISDVFPMLS----WLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTV  278 (533)
Q Consensus       205 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  278 (533)
                      +..+....    ...+.  ++.+...... .....+|++.    +++ .+..++..+..+.+..++.+.++++++..   
T Consensus       203 ~~l~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~~---  273 (502)
T PLN02426        203 GCLELSLP----ISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRRKLG---  273 (502)
T ss_pred             cccCCCCC----ccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence            76521110    01111  1221111100 0001112221    111 12235566777788888888888766432   


Q ss_pred             hhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHH
Q 009492          279 EGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEEL  358 (533)
Q Consensus       279 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei  358 (533)
                                 .....|+++.+++..        .+++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       274 -----------~~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei  334 (502)
T PLN02426        274 -----------FSASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEA  334 (502)
T ss_pred             -----------cCCcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence                       123479999999753        2678999999999999999999999999999999999999999999


Q ss_pred             HHhhCCC-CccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCccc-CCeeeCCCCEEEEcchhhhcCCCCC-CCC
Q 009492          359 AQVVGMD-SCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNI-GGYNIPKDTTIMLNVRAIHRDPKLW-DNP  435 (533)
Q Consensus       359 ~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp  435 (533)
                      +++++.+ ..++.+++++||||+|||+||||++|++|.. .|.+.+|..+ +||.||+||.|.++++++|+||++| +||
T Consensus       335 ~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp  413 (502)
T PLN02426        335 DRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDC  413 (502)
T ss_pred             HHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcCh
Confidence            9988753 3679999999999999999999999999986 5999988887 9999999999999999999999999 999


Q ss_pred             CCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeecC
Q 009492          436 LQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKK  515 (533)
Q Consensus       436 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  515 (533)
                      ++|+||||++++  + . ....+..|+|||+|+|.|+|++||++|++++++.|+++|+++++++.........+++..++
T Consensus       414 ~~F~PeRwl~~~--~-~-~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  489 (502)
T PLN02426        414 LEFKPERWLKNG--V-F-VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVR  489 (502)
T ss_pred             hhcCccccCCCC--C-c-CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecC
Confidence            999999999642  1 0 11234579999999999999999999999999999999999986542222233456788888


Q ss_pred             CCeeEeeeecC
Q 009492          516 EPLVAIPTPRL  526 (533)
Q Consensus       516 ~~~~~~~~~r~  526 (533)
                      .+++|++++|.
T Consensus       490 ~gl~v~~~~r~  500 (502)
T PLN02426        490 GGLPVRVRERV  500 (502)
T ss_pred             CCEEEEEEEcc
Confidence            99999999884


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.2e-58  Score=451.54  Aligned_cols=415  Identities=16%  Similarity=0.181  Sum_probs=293.1

Q ss_pred             CCCCCCCCcccccccCCC----CCChhHHHHHHHhhcCC-eEEEecCCeeE-------EEecCHHHHHHHHHh----CCc
Q 009492           42 LPPGPRGLPVFGYLPFLG----TTDLHKKFTELSGVYGP-IFKLWLGNKLC-------VVVSSPSLIRQVVRD----QDT  105 (533)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~dp~~v~~i~~~----~~~  105 (533)
                      .|||+.++|++|+...+.    ..++..++.+..+|||+ ||++.++|.++       |+++||++++.+|.+    +..
T Consensus        18 ~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~   97 (480)
T PLN02648         18 EIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRD   97 (480)
T ss_pred             CCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccc
Confidence            589999999999987542    34567999999999999 99999998655       999999999999986    444


Q ss_pred             ccCCCCchhhhhHhhcCCcc--eEecCCChhhHHhhhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccch
Q 009492          106 TFANRDPPKAALVVSYGGND--IAWSNYGPEWRKLRKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDI  183 (533)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl  183 (533)
                      .+..... ....  .+|++.  .++..+|+.|+++|+++. ++|+ ..++.+.+.+.+.+.++++.|..... .+.++|+
T Consensus        98 ~~~~~~~-~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~-~~~~vdv  171 (480)
T PLN02648         98 VFTGTYM-PSTA--FTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELA-KKGKAEF  171 (480)
T ss_pred             cceeeec-cCcc--ccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHh-hCCCccc
Confidence            3443222 2222  333331  555668999999999997 8888 57788999999999999999965422 4557999


Q ss_pred             hhhHHHHHHHHHHHHHhcchhhhhhccccchhhhhhhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHH
Q 009492          184 GELSFSTLVCAIQNMLWGEALELKEKGTTNLRAGLKFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNV  263 (533)
Q Consensus       184 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  263 (533)
                      .+.+..++++++++++||.+.+..  ..   ...............       .+|.....               +...
T Consensus       172 ~~~~~~lt~~vi~~~lfG~~~~~~--~l---~~~~~~~~~~~~~~~-------~~p~~~~~---------------l~~~  224 (480)
T PLN02648        172 NDPLDQMAFNFLCKALTGKDPSET--AL---GSDGPALIQKWLALQ-------LAPLASTG---------------LPHV  224 (480)
T ss_pred             cchHHHHHHHHHHHHHcCCCcchh--hh---ccchhHHHHHHHHHH-------hhHHHHcC---------------chHH
Confidence            999999999999999999865542  11   000000011111000       00110000               0000


Q ss_pred             HHHHHHHHHhhh--cchhhhhhhccCCCCCCcchHHHHHHHhccCCCCCCCCCHHHHHHHHHH-HHHhccchhhHhHHHH
Q 009492          264 INSTVEQHRNKE--LTVEGEERAGKNFEGSRNKNFLQLLLELQENDDSASSISMNQFKAVLAD-IITSGTDTTTTMVEWT  340 (533)
Q Consensus       264 ~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~AG~~tta~~l~~~  340 (533)
                      ++..+.++....  .......+  .   .+.-.+.+..+++...+    .+++++++.++++. +.++|++||+++++|+
T Consensus       225 ~~~~i~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~  295 (480)
T PLN02648        225 LEELLLHTFPLPFFLVKSDYDK--L---YDFFRASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPAL  295 (480)
T ss_pred             HHHHhhcccCCchhhhhccHHH--H---HHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            000000000000  00000000  0   00001222344443332    24999999999875 4467788888999999


Q ss_pred             HHHHhhChH-HHHHHHHHHHHhhCC-CCccchhhhhcChhHHHHHHhhhccCCCCCCCCCcccCCCcccC----CeeeCC
Q 009492          341 MAELMQHPQ-VMKKVQEELAQVVGM-DSCVEEFHLSRLMYLDAVVKETFRLHPAVPLLLPRRASESSNIG----GYNIPK  414 (533)
Q Consensus       341 l~~L~~~p~-~q~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~----g~~ip~  414 (533)
                      +++|++||+ +|+++++|++++.+. ++.++.+++++||||++||+||||++|+++.. .|++.+|++++    ||.|||
T Consensus       296 l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~Ipk  374 (480)
T PLN02648        296 LKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIKK  374 (480)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEECC
Confidence            999999995 999999999999863 45689999999999999999999999999986 48899999996    799999


Q ss_pred             CCEEEEcchhhhcCCCCCCCCCCCCCCCcCCCCcCCcccCC--CCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHHhc
Q 009492          415 DTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYS--GNNFQYLPFGSGRRMCAGIALAERMLMFVLASLLHSF  492 (533)
Q Consensus       415 Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~l~~~~~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f  492 (533)
                      |+.|+++++.+|+||++|+||++|||+||++++........  +.....++||+|+|.|+|++||++|++++++.|+++|
T Consensus       375 G~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f  454 (480)
T PLN02648        375 GEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRY  454 (480)
T ss_pred             CCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999964211110000  0011233447788999999999999999999999999


Q ss_pred             e-eecCCC
Q 009492          493 E-WELPTG  499 (533)
Q Consensus       493 ~-~~~~~~  499 (533)
                      + |++.++
T Consensus       455 ~~~~l~~~  462 (480)
T PLN02648        455 DSFEIEVD  462 (480)
T ss_pred             CEEeecCC
Confidence            8 998776


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=5.7e-54  Score=414.22  Aligned_cols=383  Identities=28%  Similarity=0.404  Sum_probs=302.7

Q ss_pred             hhHHHHHHHhhcCCeEEEecCCee--EEEecCHHHHHHHHHhCCcccCCCCchhhhh--HhhcCCcceEecCCChhhHHh
Q 009492           63 LHKKFTELSGVYGPIFKLWLGNKL--CVVVSSPSLIRQVVRDQDTTFANRDPPKAAL--VVSYGGNDIAWSNYGPEWRKL  138 (533)
Q Consensus        63 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvv~dp~~v~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  138 (533)
                      .......+.+.||.++++...+..  .++|+++++++++++++. .++.........  .....|.++++..+|+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            445666788899999988876654  899999999999999874 222221111110  122234554666789999999


Q ss_pred             hhhhHhhcCChHHHHHhHHHHHHHHHHHHHHHHhhcccCCCccchhhhHHHHHHHHHHHHHhcchhhhhhccccchhhhh
Q 009492          139 RKFFVGKMMNNESLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSFSTLVCAIQNMLWGEALELKEKGTTNLRAGL  218 (533)
Q Consensus       139 Rk~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  218 (533)
                      ||.++ +.|+++.++.+.+.+.+.+.++++.+ .    .+..+++.+.+..++.++|+ .+||.+....  ..     ..
T Consensus       103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~----~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~--~~-----~~  168 (411)
T COG2124         103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W----QGGADLVLDFAAELTLRVIA-ELLGVPLEDR--PQ-----LL  168 (411)
T ss_pred             HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c----cCCchhHHHHhhhhhHHHHH-HHhCCCHHHH--HH-----HH
Confidence            99997 99999999999999999999999998 3    23778899999999999999 9999887765  11     01


Q ss_pred             hhHHHHHHHHhcCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhccCCCCCCcchHHH
Q 009492          219 KFKLAELMVLAGTPNISDVFPMLSWLDIQGIERRAKKISLWLDNVINSTVEQHRNKELTVEGEERAGKNFEGSRNKNFLQ  298 (533)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~  298 (533)
                      .. .......   ..     |...   ......+..++...+..+++..+++++.                 +..+|+++
T Consensus       169 ~~-~~~~~~~---~~-----~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~-----------------~~~~dlls  219 (411)
T COG2124         169 RW-SDALLLR---LD-----PDLG---PEEPWRRARAARRELDAYLRALIAERRA-----------------APRDDLLS  219 (411)
T ss_pred             HH-HHHHHhc---cC-----cccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc-----------------CCcccHHH
Confidence            11 1111110   00     1111   1122456677888889999999988762                 25689999


Q ss_pred             HHHHhccCCCCCCCCCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHHHHhhCCCCccchhhhhcChh
Q 009492          299 LLLELQENDDSASSISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLSRLMY  378 (533)
Q Consensus       299 ~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~  378 (533)
                      .|+....++  +..++++||.+++.++++||+|||+++++|+++.|++||++++++++|.+.                ||
T Consensus       220 ~l~~a~~~~--~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~  281 (411)
T COG2124         220 LLLSAEDDG--GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PL  281 (411)
T ss_pred             HHHHHhhCC--CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HH
Confidence            999877652  226999999999999999999999999999999999999999999999864                79


Q ss_pred             HHHHHHhhhccCCCCCCCCCcccCCCcccCCeeeCCCCEEEEcchhhhcCCCCCCCCCCCCCCCcCCCCcCCcccCCCCC
Q 009492          379 LDAVVKETFRLHPAVPLLLPRRASESSNIGGYNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKFDYSGNN  458 (533)
Q Consensus       379 l~a~i~EtlRl~~~~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~l~~~~~~~~~~~~~~  458 (533)
                      +.++|+|+||++|+++. ++|.+++|++++|+.||+|+.|+++++++|+||++|+||++|||+||.              
T Consensus       282 ~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------------  346 (411)
T COG2124         282 LEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN--------------  346 (411)
T ss_pred             HHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC--------------
Confidence            99999999999999999 789999999999999999999999999999999999999999999997              


Q ss_pred             cceeccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCcCccccccceeecCCCeeEeeeec
Q 009492          459 FQYLPFGSGRRMCAGIALAERMLMFVLASLLHSFEWELPTGTKLNLSEKFGIVIKKKEPLVAIPTPR  525 (533)
Q Consensus       459 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  525 (533)
                      +.|+|||+|+|.|+|.+||++|++++++.|+++|++....+ ..  ......+..+..+..+.++.|
T Consensus       347 ~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~--~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         347 NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-PP--PLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-CC--CccccccccCCCcceeeeecC
Confidence            26899999999999999999999999999999999887665 21  122344444555666666544


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=74.14  E-value=11  Score=23.65  Aligned_cols=43  Identities=21%  Similarity=0.322  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHHH
Q 009492          317 QFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEELA  359 (533)
Q Consensus       317 ~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei~  359 (533)
                      ++..++..++-.|.|..+..+.-.|....-||+....+..|++
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            4566677777778888888888888888889999999988874


No 34 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=66.43  E-value=5.4  Score=31.14  Aligned_cols=23  Identities=22%  Similarity=0.388  Sum_probs=17.2

Q ss_pred             CCCccHHHHHHHHHHHHHHHHHh
Q 009492          469 RMCAGIALAERMLMFVLASLLHS  491 (533)
Q Consensus       469 r~C~G~~~A~~e~~~~l~~ll~~  491 (533)
                      ..|.|++||+.++-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            46999999999999999999984


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=64.44  E-value=1.8  Score=37.01  Aligned_cols=44  Identities=32%  Similarity=0.296  Sum_probs=33.7

Q ss_pred             cChhHHHHHHhhhccCCCCCCCCCc-ccCCCcccCCeeeCCCCEEEEc
Q 009492          375 RLMYLDAVVKETFRLHPAVPLLLPR-RASESSNIGGYNIPKDTTIMLN  421 (533)
Q Consensus       375 ~lp~l~a~i~EtlRl~~~~~~~~~R-~~~~~~~l~g~~ip~Gt~v~~~  421 (533)
                      .-..+.|||.|+.-+..-...   | +..+|+.++|..|||||.+.-.
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~v---rlRLle~i~i~g~~IPkgt~l~G~   95 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRV---RLRLLEDIQIGGILIPKGTYLYGV   95 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEE---EEEEcCceEECCEEeCCCCEEEEE
Confidence            344678999999877654332   3 5689999999999999998763


No 36 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=63.73  E-value=5.4  Score=26.22  Aligned_cols=9  Identities=44%  Similarity=0.711  Sum_probs=7.0

Q ss_pred             CCCCCcCCC
Q 009492          438 FRPERFLDD  446 (533)
Q Consensus       438 F~p~R~l~~  446 (533)
                      -||||||+-
T Consensus        43 PDPERWLP~   51 (59)
T PF08492_consen   43 PDPERWLPK   51 (59)
T ss_pred             CCccccCch
Confidence            389999964


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=43.85  E-value=23  Score=23.12  Aligned_cols=22  Identities=32%  Similarity=0.533  Sum_probs=17.1

Q ss_pred             HHHHHhhChHHHHHHHHHHHHh
Q 009492          340 TMAELMQHPQVMKKVQEELAQV  361 (533)
Q Consensus       340 ~l~~L~~~p~~q~~lr~Ei~~~  361 (533)
                      .+-+|.+||++.+++.+.=.+.
T Consensus         5 iV~YLv~nPevl~kl~~g~asL   26 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASL   26 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeE
Confidence            4678999999999998753333


No 38 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=42.45  E-value=5.4  Score=38.24  Aligned_cols=44  Identities=25%  Similarity=0.258  Sum_probs=34.3

Q ss_pred             cChhHHHHHHhhhccCCCCCCCCCc-ccCCCcccCCeeeCCCCEEEEc
Q 009492          375 RLMYLDAVVKETFRLHPAVPLLLPR-RASESSNIGGYNIPKDTTIMLN  421 (533)
Q Consensus       375 ~lp~l~a~i~EtlRl~~~~~~~~~R-~~~~~~~l~g~~ip~Gt~v~~~  421 (533)
                      .-..+.|||.|+.-+..-..+   | +..+|+.++|..||+||.|.-.
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~v---rlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAV---KLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCEE---EEEEcCceeeCCEEecCCCEEEEE
Confidence            345788999999887754332   3 5689999999999999998765


No 39 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=39.92  E-value=27  Score=19.54  Aligned_cols=16  Identities=31%  Similarity=0.814  Sum_probs=13.4

Q ss_pred             CCcceeccCCCCCCCc
Q 009492          457 NNFQYLPFGSGRRMCA  472 (533)
Q Consensus       457 ~~~~~~~Fg~G~r~C~  472 (533)
                      ..+.|+|+.|.+|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4568999999999995


No 40 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=35.26  E-value=41  Score=22.73  Aligned_cols=16  Identities=25%  Similarity=0.607  Sum_probs=13.1

Q ss_pred             cChhHHHHHHhhhccC
Q 009492          375 RLMYLDAVVKETFRLH  390 (533)
Q Consensus       375 ~lp~l~a~i~EtlRl~  390 (533)
                      +.-+++.+|+|++|+.
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3448999999999974


No 41 
>PRK06789 flagellar motor switch protein; Validated
Probab=33.90  E-value=40  Score=23.53  Aligned_cols=41  Identities=7%  Similarity=0.085  Sum_probs=32.0

Q ss_pred             HHHhhhccCCCCCCCCCcccCCC--cccCCeeeCCCCEEEEcc
Q 009492          382 VVKETFRLHPAVPLLLPRRASES--SNIGGYNIPKDTTIMLNV  422 (533)
Q Consensus       382 ~i~EtlRl~~~~~~~~~R~~~~~--~~l~g~~ip~Gt~v~~~~  422 (533)
                      -|+|-|.+.+-.-.-+-|.+-++  +.++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            36788999987776666777665  445999999999998764


No 42 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=33.45  E-value=16  Score=30.10  Aligned_cols=36  Identities=25%  Similarity=0.511  Sum_probs=26.3

Q ss_pred             CCCCCCCcCCCCcCCcccCCCCCcceeccCCCCCCCccHH
Q 009492          436 LQFRPERFLDDGIASKFDYSGNNFQYLPFGSGRRMCAGIA  475 (533)
Q Consensus       436 ~~F~p~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  475 (533)
                      .+|||++|=.    --++......+.+-|..|.-.|.|.+
T Consensus        35 aeYnP~qFpG----lv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPG----LVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCe----eEEEecCCcceEEEEecCcEEEeccC
Confidence            4799999962    11233334558999999999999976


No 43 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=32.37  E-value=1.2e+02  Score=21.82  Aligned_cols=7  Identities=43%  Similarity=0.477  Sum_probs=4.2

Q ss_pred             CCCcccc
Q 009492           47 RGLPVFG   53 (533)
Q Consensus        47 ~~~p~~G   53 (533)
                      -.-|++|
T Consensus        65 IYrPvI~   71 (94)
T PF05393_consen   65 IYRPVIG   71 (94)
T ss_pred             ccccccc
Confidence            3456677


No 44 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=31.79  E-value=22  Score=22.73  Aligned_cols=10  Identities=50%  Similarity=1.072  Sum_probs=8.7

Q ss_pred             eccCCCCCCC
Q 009492          462 LPFGSGRRMC  471 (533)
Q Consensus       462 ~~Fg~G~r~C  471 (533)
                      -+||-|.|.|
T Consensus        12 ~kfg~GsrsC   21 (56)
T KOG3506|consen   12 RKFGQGSRSC   21 (56)
T ss_pred             cccCCCCcce
Confidence            4799999998


No 45 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=30.79  E-value=1.1e+02  Score=24.01  Aligned_cols=42  Identities=12%  Similarity=0.341  Sum_probs=33.2

Q ss_pred             CChhHHHHHHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHhCC
Q 009492           61 TDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRDQD  104 (533)
Q Consensus        61 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~~~  104 (533)
                      .+....+++|.++||.+--.  .+...+...|++.++++..++.
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhChh
Confidence            36778899999999986442  2567788899999999988753


No 46 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=28.55  E-value=89  Score=22.52  Aligned_cols=19  Identities=16%  Similarity=0.496  Sum_probs=16.0

Q ss_pred             ChHHHHHHHHHHHHhhCCC
Q 009492          347 HPQVMKKVQEELAQVVGMD  365 (533)
Q Consensus       347 ~p~~q~~lr~Ei~~~~~~~  365 (533)
                      .|++...+|+||-+++...
T Consensus        35 ~pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          35 QPDYLEQLRKEILEVISKY   53 (88)
T ss_pred             CcchHHHHHHHHHHHHHHH
Confidence            3899999999999988653


No 47 
>PF10264 Stork_head:  Winged helix Storkhead-box1 domain;  InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=27.80  E-value=2.3e+02  Score=20.22  Aligned_cols=40  Identities=15%  Similarity=0.233  Sum_probs=28.4

Q ss_pred             hHhHHHHHHHHhhC--hHHHHHHHHHHHHhhCCCCccchhhh
Q 009492          334 TTMVEWTMAELMQH--PQVMKKVQEELAQVVGMDSCVEEFHL  373 (533)
Q Consensus       334 a~~l~~~l~~L~~~--p~~q~~lr~Ei~~~~~~~~~~~~~~l  373 (533)
                      +-++.|+++.|-+.  +-.++.|++.+.+.+++-..++.+.+
T Consensus        13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~l   54 (80)
T PF10264_consen   13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEVL   54 (80)
T ss_pred             HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHHH
Confidence            34567777777654  67889999999998876555665544


No 48 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=25.78  E-value=52  Score=25.64  Aligned_cols=23  Identities=39%  Similarity=0.424  Sum_probs=18.9

Q ss_pred             cccCCCcccCCeeeCCCCEEEEc
Q 009492          399 RRASESSNIGGYNIPKDTTIMLN  421 (533)
Q Consensus       399 R~~~~~~~l~g~~ip~Gt~v~~~  421 (533)
                      -+++.|.+++|-.||+||.|+.-
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~~   93 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVGV   93 (122)
T ss_pred             EecCCCcccCCeeecceEEEEEE
Confidence            35567999999999999999654


No 49 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=24.94  E-value=1.2e+02  Score=18.15  Aligned_cols=29  Identities=24%  Similarity=0.386  Sum_probs=18.6

Q ss_pred             hHHHHHHHHHHHHhhCCCCccchhhhhcChhHHHHHHhhhcc
Q 009492          348 PQVMKKVQEELAQVVGMDSCVEEFHLSRLMYLDAVVKETFRL  389 (533)
Q Consensus       348 p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl  389 (533)
                      .++.+.+|.|++.+-             --.++|+..|--|.
T Consensus        10 qEIL~EvrkEl~K~K-------------~EIIeA~~~eL~r~   38 (40)
T PF08776_consen   10 QEILEEVRKELQKVK-------------EEIIEAIRQELSRR   38 (40)
T ss_dssp             HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-------------HHHHHHHHHHHhcc
Confidence            567777888877652             22567777776553


No 50 
>PRK02302 hypothetical protein; Provisional
Probab=24.64  E-value=1.8e+02  Score=21.24  Aligned_cols=34  Identities=15%  Similarity=0.133  Sum_probs=28.4

Q ss_pred             HHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHh
Q 009492           69 ELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRD  102 (533)
Q Consensus        69 ~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~  102 (533)
                      +.-+|||+|..+.--.+-+++-.|-+.+.++...
T Consensus        21 r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         21 RKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3356899999887777788889999999999886


No 51 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=23.98  E-value=1.2e+02  Score=28.20  Aligned_cols=69  Identities=20%  Similarity=0.299  Sum_probs=41.8

Q ss_pred             HHHHHhhhccCCCC---CCCCCcccCCCcccCC----eeeCCCCEEEEcchhhhcCCCCCCCCCCCCCCCcCCCCcCCcc
Q 009492          380 DAVVKETFRLHPAV---PLLLPRRASESSNIGG----YNIPKDTTIMLNVRAIHRDPKLWDNPLQFRPERFLDDGIASKF  452 (533)
Q Consensus       380 ~a~i~EtlRl~~~~---~~~~~R~~~~~~~l~g----~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~l~~~~~~~~  452 (533)
                      +.+|+.|..+.||.   |.++.-.++.|.++-=    -.|..||.|.++                               
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-------------------------------  324 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-------------------------------  324 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-------------------------------
Confidence            46788888888865   4443334455544421    245666655544                               


Q ss_pred             cCCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 009492          453 DYSGNNFQYLPFGSGRRMCAGIALAERMLMFVL  485 (533)
Q Consensus       453 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l  485 (533)
                         +++++++-||.+  +-.||++|. |||..+
T Consensus       325 ---GspYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         325 ---GSPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             ---CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence               244555666543  667999998 888664


No 52 
>PF14316 DUF4381:  Domain of unknown function (DUF4381)
Probab=23.59  E-value=91  Score=25.28  Aligned_cols=22  Identities=9%  Similarity=0.063  Sum_probs=9.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhh
Q 009492           12 ETAIITCLVSVLAVVYFAWNVK   33 (533)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~   33 (533)
                      .|+++++++++++++++++.++
T Consensus        22 GWwll~~lll~~~~~~~~~~~r   43 (146)
T PF14316_consen   22 GWWLLLALLLLLLILLLWRLWR   43 (146)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444444444444333


No 53 
>PRK02886 hypothetical protein; Provisional
Probab=22.22  E-value=2.1e+02  Score=20.71  Aligned_cols=34  Identities=9%  Similarity=0.133  Sum_probs=28.3

Q ss_pred             HHHhhcCCeEEEecCCeeEEEecCHHHHHHHHHh
Q 009492           69 ELSGVYGPIFKLWLGNKLCVVVSSPSLIRQVVRD  102 (533)
Q Consensus        69 ~~~~kyG~v~~~~~~~~~~vvv~dp~~v~~i~~~  102 (533)
                      +.-++||+|..+.--.+-+++-+|-+.+.++...
T Consensus        19 r~LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         19 KQLRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3356899999887667788888999999999886


No 54 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=22.03  E-value=1.9e+02  Score=17.16  Aligned_cols=13  Identities=15%  Similarity=0.588  Sum_probs=9.8

Q ss_pred             HhhChHHHHHHHH
Q 009492          344 LMQHPQVMKKVQE  356 (533)
Q Consensus       344 L~~~p~~q~~lr~  356 (533)
                      +.+||++++.+++
T Consensus        23 ~~~HPei~~~i~~   35 (38)
T PF14483_consen   23 CERHPEIQQEIRS   35 (38)
T ss_dssp             HHHSTHHHHHHHT
T ss_pred             HHhChhHHHHHHh
Confidence            3489999887764


No 55 
>PF09551 Spore_II_R:  Stage II sporulation protein R (spore_II_R);  InterPro: IPR014202  This entry is designated stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. SpoIIR is a signalling protein that links the activation of sigma E to the transcriptional activity of sigma F during sporulation [, ].
Probab=21.85  E-value=1.9e+02  Score=22.86  Aligned_cols=44  Identities=14%  Similarity=0.101  Sum_probs=23.9

Q ss_pred             hcChhHHHHHHhhhccCCCCCCC---CCcccCCCcccCCeeeCCCCE
Q 009492          374 SRLMYLDAVVKETFRLHPAVPLL---LPRRASESSNIGGYNIPKDTT  417 (533)
Q Consensus       374 ~~lp~l~a~i~EtlRl~~~~~~~---~~R~~~~~~~l~g~~ip~Gt~  417 (533)
                      ..++-++++.+++++-....-..   +.+.---+-.++++.+|+|..
T Consensus        52 ~~~~~Ie~~A~~~l~~~G~~y~v~v~~~~~~FPtK~YG~~~~PaG~Y   98 (130)
T PF09551_consen   52 ENLPEIEQIAEEVLAEEGYDYPVKVELGRFYFPTKTYGDIVLPAGEY   98 (130)
T ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEEeeeCCCceECCEeccCCce
Confidence            45556666666666554432211   112222234558899999976


No 56 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=21.66  E-value=2.2e+02  Score=18.03  Aligned_cols=35  Identities=14%  Similarity=0.111  Sum_probs=25.2

Q ss_pred             HHHHhhcCCeEEEecC----CeeEEEecCHHHHHHHHHh
Q 009492           68 TELSGVYGPIFKLWLG----NKLCVVVSSPSLIRQVVRD  102 (533)
Q Consensus        68 ~~~~~kyG~v~~~~~~----~~~~vvv~dp~~v~~i~~~  102 (533)
                      .++..+||+|-.+.+.    +.-+|-..+++.++.....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            4567899999887753    4456667799998888874


No 57 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=21.59  E-value=3.2e+02  Score=19.70  Aligned_cols=50  Identities=10%  Similarity=0.108  Sum_probs=41.5

Q ss_pred             CCHHHHHHHHHHHHHhccchhhHhHHHHHHHHhhChHHHHHHHHHHHHhh
Q 009492          313 ISMNQFKAVLADIITSGTDTTTTMVEWTMAELMQHPQVMKKVQEELAQVV  362 (533)
Q Consensus       313 l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~  362 (533)
                      .+.+.........++-=+..++....-.+.+-++||+...++.+.+..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34555666677788888999999999999999999999999999887654


No 58 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=20.34  E-value=92  Score=25.21  Aligned_cols=24  Identities=21%  Similarity=0.349  Sum_probs=19.6

Q ss_pred             ccCCCcccCCeeeCCCCEEEEcch
Q 009492          400 RASESSNIGGYNIPKDTTIMLNVR  423 (533)
Q Consensus       400 ~~~~~~~l~g~~ip~Gt~v~~~~~  423 (533)
                      ...+|+.++|..||+|+.-+..+.
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP   74 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIP   74 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEec
Confidence            345799999999999999777664


No 59 
>PF08138 Sex_peptide:  Sex peptide (SP) family;  InterPro: IPR012608 This family consists of Sex Peptides (SP) that are found in Drosophila. On mating, Drosophila females decreases her remating rate and increases her egg-laying rate due, in part, to the transfer of SP from the male to the female. SP are found in seminal fluids transferred from the male to the female during mating. The male seminal fluid proteins are referred to as accessory gland proteins (Acps). The SP is one of the most interesting Acps and plays an important role in reproduction [].; GO: 0005179 hormone activity, 0046008 regulation of female receptivity, post-mating, 0005576 extracellular region; PDB: 2LAQ_A.
Probab=20.11  E-value=56  Score=20.75  Aligned_cols=26  Identities=19%  Similarity=0.321  Sum_probs=3.3

Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCC
Q 009492           22 VLAVVYFAWNVKKSRKANATLPPGPR   47 (533)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~ppgp~   47 (533)
                      +++.+...|.++..++..+-..|+|.
T Consensus        12 lllGla~s~~wp~~~r~~~~~i~sp~   37 (56)
T PF08138_consen   12 LLLGLAQSWEWPWQRRTTKFPIPSPN   37 (56)
T ss_dssp             ----------S---S---S-SSSS-S
T ss_pred             HHHHHHhcccccccCCCCCCCCCCCC
Confidence            34444445555544443332234443


Done!