Query         009497
Match_columns 533
No_of_seqs    193 out of 1899
Neff          10.7
Searched_HMMs 46136
Date          Thu Mar 28 13:50:18 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009497.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009497hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.1E-83 6.8E-88  629.1  48.1  459   30-526    19-488 (489)
  2 PLN02183 ferulate 5-hydroxylas 100.0 1.8E-81 3.9E-86  639.8  49.0  516    1-530     1-516 (516)
  3 PLN03234 cytochrome P450 83B1; 100.0 1.2E-77 2.6E-82  611.2  48.2  476   21-525    12-498 (499)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 3.8E-77 8.2E-82  608.1  47.7  466   36-526    33-509 (517)
  5 KOG0158 Cytochrome P450 CYP3/C 100.0 1.2E-77 2.5E-82  579.9  40.8  457   33-526    27-499 (499)
  6 PLN00110 flavonoid 3',5'-hydro 100.0   1E-76 2.2E-81  601.2  47.6  462   34-528    28-499 (504)
  7 PLN03112 cytochrome P450 famil 100.0 2.7E-76 5.8E-81  603.1  48.7  470   33-529    28-511 (514)
  8 PLN02971 tryptophan N-hydroxyl 100.0 1.3E-76 2.8E-81  606.0  46.0  462   35-527    55-535 (543)
  9 PLN02394 trans-cinnamate 4-mon 100.0 4.9E-75 1.1E-79  592.7  47.0  476   19-526    12-502 (503)
 10 PLN02966 cytochrome P450 83A1  100.0 1.3E-74 2.8E-79  588.0  47.6  468   28-525    20-499 (502)
 11 PTZ00404 cytochrome P450; Prov 100.0   1E-74 2.2E-79  587.2  44.7  446   33-525    25-482 (482)
 12 PLN00168 Cytochrome P450; Prov 100.0 9.5E-74 2.1E-78  583.4  45.1  472   34-527    32-518 (519)
 13 PLN02290 cytokinin trans-hydro 100.0 3.1E-73 6.8E-78  580.8  41.2  453   35-527    40-516 (516)
 14 PLN02655 ent-kaurene oxidase   100.0 8.4E-73 1.8E-77  569.3  43.1  446   39-527     1-465 (466)
 15 PLN02500 cytochrome P450 90B1  100.0 3.1E-72 6.8E-77  569.2  39.9  439   31-524    32-488 (490)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 2.3E-72   5E-77  564.4  37.4  454   35-526    33-496 (497)
 17 PLN03018 homomethionine N-hydr 100.0 1.1E-70 2.4E-75  557.8  48.5  464   36-529    39-527 (534)
 18 KOG0159 Cytochrome P450 CYP11/ 100.0 5.8E-72 1.3E-76  526.9  35.1  451   36-526    49-518 (519)
 19 PLN02774 brassinosteroid-6-oxi 100.0 2.4E-71 5.2E-76  558.2  40.6  434   30-524    24-462 (463)
 20 PLN03195 fatty acid omega-hydr 100.0 4.5E-70 9.9E-75  557.0  41.6  452   38-526    31-516 (516)
 21 PLN02169 fatty acid (omega-1)- 100.0 1.2E-69 2.7E-74  548.4  41.4  448   36-525    30-499 (500)
 22 PLN02738 carotene beta-ring hy 100.0 1.4E-69   3E-74  555.4  41.9  448   49-530   143-599 (633)
 23 PLN02196 abscisic acid 8'-hydr 100.0 1.1E-69 2.5E-74  545.6  39.9  426   34-525    32-462 (463)
 24 PF00067 p450:  Cytochrome P450 100.0 7.8E-71 1.7E-75  560.3  31.3  448   39-522     1-463 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 3.1E-69 6.6E-74  541.7  39.7  438   33-527     3-451 (452)
 26 PLN02987 Cytochrome P450, fami 100.0 2.8E-68   6E-73  533.4  41.9  436   31-526    24-469 (472)
 27 PLN02302 ent-kaurenoic acid ox 100.0 2.8E-68 6.1E-73  542.8  42.6  437   35-527    40-489 (490)
 28 KOG0684 Cytochrome P450 [Secon 100.0   2E-67 4.4E-72  483.4  34.5  444   37-526    31-485 (486)
 29 PLN02936 epsilon-ring hydroxyl 100.0 2.1E-66 4.6E-71  525.0  39.5  456   38-528    13-484 (489)
 30 PLN02426 cytochrome P450, fami 100.0   9E-66   2E-70  519.3  41.3  434   45-527    49-501 (502)
 31 PLN02648 allene oxide synthase 100.0 5.2E-58 1.1E-62  455.5  27.7  407   35-497    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.7E-53 3.6E-58  418.6  31.2  382   58-525    24-410 (411)
 33 PF12508 DUF3714:  Protein of u  60.4     2.4 5.3E-05   36.8  -0.4   44  376-420    51-94  (200)
 34 PF08492 SRP72:  SRP72 RNA-bind  51.9      11 0.00023   25.4   1.6    8  439-446    44-51  (59)
 35 PF05952 ComX:  Bacillus compet  46.3      18  0.0004   24.1   2.0   25  340-364     4-28  (57)
 36 PHA03049 IMV membrane protein;  38.4      50  0.0011   22.6   3.1    6   36-41     30-35  (68)
 37 TIGR03779 Bac_Flav_CT_M Bacter  36.6      10 0.00023   36.9  -0.3   45  376-421   254-298 (410)
 38 PF12554 MOZART1:  Mitotic-spin  35.3 1.1E+02  0.0024   19.7   4.2   42  318-359     6-47  (48)
 39 COG0851 MinE Septum formation   26.7 1.3E+02  0.0028   22.2   3.8   18  348-365    35-52  (88)
 40 PF14129 DUF4296:  Domain of un  26.3 2.4E+02  0.0051   20.7   5.5   50  314-363    29-78  (87)
 41 PF13625 Helicase_C_3:  Helicas  25.5 1.5E+02  0.0032   23.8   4.7   41   56-98     74-114 (129)
 42 cd05024 S-100A10 S-100A10: A s  25.5 2.8E+02  0.0062   20.7   5.7   40  281-332    44-83  (91)
 43 PRK06789 flagellar motor switc  25.0      76  0.0016   22.6   2.4   39  383-421    21-62  (74)
 44 KOG3653 Transforming growth fa  25.0 2.2E+02  0.0047   28.7   6.3   47   57-103   210-257 (534)
 45 PF09201 SRX:  SRX;  InterPro:   23.8      66  0.0014   25.9   2.2   23  466-488    18-40  (148)
 46 PF13893 RRM_5:  RNA recognitio  23.4 1.9E+02  0.0041   18.7   4.2   35   62-96      1-39  (56)
 47 KOG3506 40S ribosomal protein   22.2      41 0.00089   22.0   0.6    9  460-468    13-21  (56)
 48 PHA02902 putative IMV membrane  21.7 1.3E+02  0.0028   20.4   2.9    6   61-66     58-63  (70)
 49 PF12444 Sox_N:  Sox developmen  21.7      57  0.0012   23.9   1.3   21  476-496    60-80  (84)
 50 PF14483 Cut8_M:  Cut8 dimerisa  21.5 1.3E+02  0.0029   18.1   2.7   17  341-357    18-35  (38)
 51 KOG0114 Predicted RNA-binding   21.2 3.4E+02  0.0075   20.9   5.3   39   59-97     32-76  (124)
 52 PF11227 DUF3025:  Protein of u  21.1      54  0.0012   28.8   1.4   19  424-442   193-211 (212)
 53 PF01102 Glycophorin_A:  Glycop  20.8 1.2E+02  0.0025   24.2   3.0    6   30-35     89-94  (122)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.1e-83  Score=629.08  Aligned_cols=459  Identities=45%  Similarity=0.815  Sum_probs=401.4

Q ss_pred             hhhcCCCCCCCCCCCCceeecccccCcc-chhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCc-
Q 009497           30 TTLRKKLPYPPGPKGYPIIGNMAMMDQL-THRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPA-  107 (533)
Q Consensus        30 ~~~~~~~~~ppgP~~~P~lG~~~~~~~~-~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~-  107 (533)
                      .+.+++.+.||||+++|++||++.+... +|+.+.+|.++|||||.+++|..++|+|+|+++++|++++++..|++|+. 
T Consensus        19 ~~~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~   98 (489)
T KOG0156|consen   19 KKYRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDP   98 (489)
T ss_pred             HhccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            3344558999999999999999999776 99999999999999999999999999999999999999999999999997 


Q ss_pred             ccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhc-CCeechhHHHHHHHHHH
Q 009497          108 NVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTT-GSKVNIGELVFALTRNI  185 (533)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~d~~~~~~~~~~~~  185 (533)
                      ........+++.+.+++.+|+.|+.+||+....+++.+.++...... ++++.+++.+.+.. ++++|+.+.+..++.++
T Consensus        99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen   99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHH
Confidence            33446666677788888899999999999999999999999988887 99999999998622 37999999999999999


Q ss_pred             HHHHhhcCCCCCch----HHHHHHHHHHHHHhcccccccchh-hhcccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009497          186 TYRAAFGSFSHDGQ----DEFVKILQEFSKLFGAFNIADFFP-WMGWIN-ARGFYKRMARARESLDGFIDSIIDEHMKKK  259 (533)
Q Consensus       186 ~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (533)
                      +++++||.++.+.+    .++..++.......+.....+++| ++.++. ..+..+++.....+++.+++++++++++..
T Consensus       179 I~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  179 ICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999998532    346777888888888888889999 565543 335667777777779999999999998865


Q ss_pred             hccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHH
Q 009497          260 KKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIE  339 (533)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~  339 (533)
                       ..   +              +. .|++|.++...++++            ...+++++|.+.+.++++||+|||++|+.
T Consensus       259 -~~---~--------------~~-~D~vD~lL~~~~~~~------------~~~~t~~~i~~~~~dl~~AGtdTta~Tl~  307 (489)
T KOG0156|consen  259 -GD---E--------------EG-RDFVDALLKLMKEEK------------AEGLTDDHLKALILDLFLAGTDTTATTLE  307 (489)
T ss_pred             -cc---C--------------CC-CcHHHHHHHhhcccc------------cCCCCHHHHHHHHHHHHhcccchHHHHHH
Confidence             11   0              22 899999999876543            11299999999999999999999999999


Q ss_pred             HHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCcccc-ccccccceeeceecCCCCEE
Q 009497          340 WAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLL-HETASNTVVSGYNIPAKSRV  418 (533)
Q Consensus       340 ~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~~~~i~g~~ip~G~~v  418 (533)
                      |++.+|++||++|+|+|+||++++|.++.++.+|+.+||||+|||+|++|++|++|... |.+.+|+.++||.|||||.|
T Consensus       308 Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v  387 (489)
T KOG0156|consen  308 WAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTV  387 (489)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEE
Confidence            99999999999999999999999999888999999999999999999999999999876 99999999999999999999


Q ss_pred             EeehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCC
Q 009497          419 MINAWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMS  498 (533)
Q Consensus       419 ~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~  498 (533)
                      +++.|++|+||++|+||++|+||||++++  +..+....++|||.|+|.|||..+|++|+.++++.|+++|||+++++  
T Consensus       388 ~vn~~ai~rDp~vw~dP~eF~PERFl~~~--d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~--  463 (489)
T KOG0156|consen  388 LVNLWAIHRDPKVWEDPEEFKPERFLDSN--DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG--  463 (489)
T ss_pred             EEeehhhhcCCccCCCccccChhhhcCCc--cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC--
Confidence            99999999999999999999999999874  22336678999999999999999999999999999999999999877  


Q ss_pred             CCCCCcccccCCcCCCccceeEEeeecc
Q 009497          499 PGELDMNDMFGLTAPKACRLVAVPSYRL  526 (533)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                        ++++... +.+...+.|+.+.+.+|.
T Consensus       464 --~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  464 --KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             --CCCCccc-ccceecCCcceeeeecCC
Confidence              3455555 466677788888887774


No 2  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.8e-81  Score=639.78  Aligned_cols=516  Identities=72%  Similarity=1.234  Sum_probs=408.4

Q ss_pred             CcchhhcccCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCceeecccccCccchhHHHHHHHHhCCeEEEeeCCe
Q 009497            1 MDSLLQTLQSSPIFFIILPLLLAFVLFSLTTLRKKLPYPPGPKGYPIIGNMAMMDQLTHRGLADLAKKYGGLLHLQMGAI   80 (533)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~   80 (533)
                      ||+-++.+.+++.+++++..++ ++++++++.+++.+.||||+++|++|+++.+....+.++.+|+++||++|++++|+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~   79 (516)
T PLN02183          1 MDSPLQSLLTSPSFFLILISLF-LFLGLISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYL   79 (516)
T ss_pred             CCcHHHhhhccchHHHHHHHHH-HHHHHHhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCc
Confidence            7888888888776555553333 344445566667889999999999999987766677889999999999999999999


Q ss_pred             eEEEEcCHHHHHHHHHhCCcccCCCCcccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHHHHHHHH
Q 009497           81 HVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDST  160 (533)
Q Consensus        81 ~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~~~~~~l  160 (533)
                      ++|+|+||+++++++.++...|+.++..........+..+++++.+|+.|+++|+.+..++|+.+.++.+.++.++++.+
T Consensus        80 ~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~  159 (516)
T PLN02183         80 HMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVRDEVDSM  159 (516)
T ss_pred             ceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            99999999999999998877777776533322222223467888899999999998657899999999988877889999


Q ss_pred             HHHHHhhcCCeechhHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHH
Q 009497          161 LQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARA  240 (533)
Q Consensus       161 ~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~  240 (533)
                      ++.+....|+++|+.+++..+++|++++++||...++...++.+.+..+............+|++.++.+....++..+.
T Consensus       160 ~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  239 (516)
T PLN02183        160 VRSVSSNIGKPVNIGELIFTLTRNITYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKA  239 (516)
T ss_pred             HHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHH
Confidence            99997655778999999999999999999999987655455666666555544444444566665543223335566777


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHH
Q 009497          241 RESLDGFIDSIIDEHMKKKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIK  320 (533)
Q Consensus       241 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~  320 (533)
                      .+.+.+++.++++++.++........        +   ......|+++.++++..++......  .+......++++++.
T Consensus       240 ~~~~~~~~~~~i~~~~~~~~~~~~~~--------~---~~~~~~d~l~~ll~~~~~~~~~~~~--~~~~~~~~l~~~~i~  306 (516)
T PLN02183        240 RKSLDGFIDDIIDDHIQKRKNQNADN--------D---SEEAETDMVDDLLAFYSEEAKVNES--DDLQNSIKLTRDNIK  306 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhhccccccc--------c---cccccccHHHHHHHhhhcccccccc--ccccccCCCCHHHHH
Confidence            88888888888888766543210000        0   0023458999999865432100000  000012358999999


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCcccccc
Q 009497          321 AIIMDVMFGGTETVASAIEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHE  400 (533)
Q Consensus       321 ~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~  400 (533)
                      .++.++++||+|||+++++|++++|++||++|+|+|+||+++++.++.++.+++++||||+|||+||||++|++|...|.
T Consensus       307 ~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~  386 (516)
T PLN02183        307 AIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHE  386 (516)
T ss_pred             HHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeee
Confidence            99999999999999999999999999999999999999999998777789999999999999999999999999998899


Q ss_pred             ccccceeeceecCCCCEEEeehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHH
Q 009497          401 TASNTVVSGYNIPAKSRVMINAWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALEL  480 (533)
Q Consensus       401 ~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~  480 (533)
                      +.+|++++||.|||||.|+++.|++||||++|+||++|+||||++++..+.......|+|||.|+|.|+|++||++|+++
T Consensus       387 ~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l  466 (516)
T PLN02183        387 TAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDL  466 (516)
T ss_pred             ccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999755322223445799999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCCCCCCCCcccccCCcCCCccceeEEeeeccCCCC
Q 009497          481 SVAHLLHCFNWELPDGMSPGELDMNDMFGLTAPKACRLVAVPSYRLTCPL  530 (533)
Q Consensus       481 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  530 (533)
                      ++|+|+++|++++.++..+...+....++.+.++..++.+.+++|-.|++
T Consensus       467 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  516 (516)
T PLN02183        467 AVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYRLQCPL  516 (516)
T ss_pred             HHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecCCCCCC
Confidence            99999999999998875333355445567665566789999999988875


No 3  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.2e-77  Score=611.24  Aligned_cols=476  Identities=37%  Similarity=0.736  Sum_probs=381.8

Q ss_pred             HHHHHHHHHhhhcCCCCCCCCCCCCceeecccccCc-cchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCC
Q 009497           21 LLAFVLFSLTTLRKKLPYPPGPKGYPIIGNMAMMDQ-LTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQD   99 (533)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~ppgP~~~P~lG~~~~~~~-~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~   99 (533)
                      +.+.++......+++.+.||||+++|++|++..+.. +++.++.+++++||++|++++|+.++|+++|||++++++.++.
T Consensus        12 ~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~   91 (499)
T PLN03234         12 AAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQD   91 (499)
T ss_pred             HHHHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCC
Confidence            333344444455567888999999999999988844 7889999999999999999999999999999999999999887


Q ss_pred             cccCCCCcccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCeechhH
Q 009497          100 LVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSKVNIGE  176 (533)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~~d~~~  176 (533)
                      ..|.+++...........+....+...++.|+++|+.+..++|++++++.+.+.+ ++++++++.|.+.  .++++|+.+
T Consensus        92 ~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~  171 (499)
T PLN03234         92 LNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSE  171 (499)
T ss_pred             ccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHH
Confidence            7888776543332222222333455667899999998657999999999999998 9999999999753  367899999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCchH---HHHHHHHHHHHHhcccccccchhhhccc-ccccHHHHHHHHHHHHHHHHHHHH
Q 009497          177 LVFALTRNITYRAAFGSFSHDGQD---EFVKILQEFSKLFGAFNIADFFPWMGWI-NARGFYKRMARARESLDGFIDSII  252 (533)
Q Consensus       177 ~~~~~~~~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i  252 (533)
                      .+..+++|+++.++||.+++....   ++.+.................+|++.+. ...+..++..++.+.+.+++.+++
T Consensus       172 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  251 (499)
T PLN03234        172 LLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELL  251 (499)
T ss_pred             HHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998874433   3333333333332222333445554331 112334667788889999999999


Q ss_pred             HHHHHhhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccc
Q 009497          253 DEHMKKKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTE  332 (533)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~  332 (533)
                      +++++....+                  ....|+++.+++...+++           ....+++++|..++.++++||+|
T Consensus       252 ~~~~~~~~~~------------------~~~~d~l~~l~~~~~~~~-----------~~~~~~~~~i~~~~~~ll~AG~d  302 (499)
T PLN03234        252 DETLDPNRPK------------------QETESFIDLLMQIYKDQP-----------FSIKFTHENVKAMILDIVVPGTD  302 (499)
T ss_pred             HHHHhhcccC------------------CCcccHHHHHHHHhhccC-----------cCCCCCHHHHHHHHHHHHhcchh
Confidence            8865432211                  234688888887543321           11358999999999999999999


Q ss_pred             cHHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCcccc-ccccccceeecee
Q 009497          333 TVASAIEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLL-HETASNTVVSGYN  411 (533)
Q Consensus       333 tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~~~~i~g~~  411 (533)
                      ||+++++|++++|++||++|+|+|+|+++++++.+.++++++++|||++|||+|+||++|+++... |.+.+|++++||.
T Consensus       303 TTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~  382 (499)
T PLN03234        303 TAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYD  382 (499)
T ss_pred             hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEE
Confidence            999999999999999999999999999999988778899999999999999999999999999874 9999999999999


Q ss_pred             cCCCCEEEeehhhhccCCCCC-CCCCCCCCCccCCCCCC-CCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhc
Q 009497          412 IPAKSRVMINAWAIGRDPSAW-EDPDKFNPARFLHENAP-DFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCF  489 (533)
Q Consensus       412 ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f  489 (533)
                      |||||.|+++.|.+||||++| +||++||||||+++.+. ........|+|||.|+|+|+|+++|++|+++++|.|+++|
T Consensus       383 IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f  462 (499)
T PLN03234        383 IPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKF  462 (499)
T ss_pred             ECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHhe
Confidence            999999999999999999999 89999999999975422 1223456799999999999999999999999999999999


Q ss_pred             eeecCCCCCCCCCCcccccCCcCCCccceeEEeeec
Q 009497          490 NWELPDGMSPGELDMNDMFGLTAPKACRLVAVPSYR  525 (533)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  525 (533)
                      +|+++++..++.+.....+|++..+++++.+.+++|
T Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        463 DWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             eeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            999988754455555566788888888888888876


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.8e-77  Score=608.15  Aligned_cols=466  Identities=39%  Similarity=0.754  Sum_probs=378.0

Q ss_pred             CCCCCCCCCCceeecccccCccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchhhhc
Q 009497           36 LPYPPGPKGYPIIGNMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLT  115 (533)
Q Consensus        36 ~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~~~  115 (533)
                      .+.||||+++|++|+++.+..+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|.+++.........
T Consensus        33 ~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~  112 (517)
T PLN02687         33 RPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMA  112 (517)
T ss_pred             CCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhc
Confidence            45789999999999998887779999999999999999999999999999999999999998877888876544333333


Q ss_pred             cCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh-cCCeechhHHHHHHHHHHHHHHhhcC
Q 009497          116 YDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT-TGSKVNIGELVFALTRNITYRAAFGS  193 (533)
Q Consensus       116 ~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~-~~~~~d~~~~~~~~~~~~~~~~~fG~  193 (533)
                      ..+.+.+++.+|+.|+++||.+..++|+.++++.+.+.+ ++++++++.|.+. .++++|+.++++.+++|+++..+||.
T Consensus       113 ~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  192 (517)
T PLN02687        113 YNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGR  192 (517)
T ss_pred             cCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhCc
Confidence            334467888889999999999844899999999999999 9999999999763 35689999999999999999999998


Q ss_pred             CCCC--c---hHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Q 009497          194 FSHD--G---QDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRDEE  268 (533)
Q Consensus       194 ~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  268 (533)
                      ++..  .   ...+.+.+..+...........++|++.++......++..+..+.+.+++.++++++++..+.+      
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~------  266 (517)
T PLN02687        193 RVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG------  266 (517)
T ss_pred             cccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------
Confidence            8641  1   2345555554444333332334566544332222345566677788888889998877653221      


Q ss_pred             ccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhC
Q 009497          269 GKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELMKS  348 (533)
Q Consensus       269 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~  348 (533)
                                 .....|+++.+++...++.        ....+..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       267 -----------~~~~~d~l~~ll~~~~~~~--------~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~  327 (517)
T PLN02687        267 -----------SEEHKDLLSTLLALKREQQ--------ADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRH  327 (517)
T ss_pred             -----------CcccccHHHHHHHhhcccc--------ccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhC
Confidence                       0234689999998654310        000123689999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCccc-cccccccceeeceecCCCCEEEeehhhhcc
Q 009497          349 PYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLL-LHETASNTVVSGYNIPAKSRVMINAWAIGR  427 (533)
Q Consensus       349 p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~  427 (533)
                      |++|+|+++||+++++.++.++.+++++||||+|||+|+||++|+++.. .|.+.+|++++||.|||||.|.++.|++||
T Consensus       328 P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~  407 (517)
T PLN02687        328 PDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIAR  407 (517)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcC
Confidence            9999999999999998778899999999999999999999999999985 599999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCCC---CCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCCc
Q 009497          428 DPSAWEDPDKFNPARFLHENAPD---FTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELDM  504 (533)
Q Consensus       428 d~~~~~~p~~F~PeR~l~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~  504 (533)
                      ||++|+||++|+||||++++...   .......|+|||.|+|.|+|++||++|+++++|+||++|++++.++..+++++.
T Consensus       408 d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  487 (517)
T PLN02687        408 DPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNM  487 (517)
T ss_pred             CcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCc
Confidence            99999999999999999753211   112345799999999999999999999999999999999999987754444544


Q ss_pred             ccccCCcCCCccceeEEeeecc
Q 009497          505 NDMFGLTAPKACRLVAVPSYRL  526 (533)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                      ...++++..++.++.++++||.
T Consensus       488 ~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        488 EEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             ccccceeeecCCCeEEeeccCC
Confidence            4456777777788999999995


No 5  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-77  Score=579.87  Aligned_cols=457  Identities=27%  Similarity=0.362  Sum_probs=357.4

Q ss_pred             cCCCCCCCCCCCCceeecccccC--ccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCC--cc
Q 009497           33 RKKLPYPPGPKGYPIIGNMAMMD--QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRP--AN  108 (533)
Q Consensus        33 ~~~~~~ppgP~~~P~lG~~~~~~--~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~--~~  108 (533)
                      +.+.+.+|+|+++|++|++..+.  +.+.....+...+||+++.+..+.++.++|+|||.+++|+.+...+|.++.  ..
T Consensus        27 yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~  106 (499)
T KOG0158|consen   27 YWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIY  106 (499)
T ss_pred             hhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence            34566889999999999998883  333444444445559999999999999999999999999999999998854  22


Q ss_pred             cchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhcC--CeechhHHHHHHHHHH
Q 009497          109 VAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTG--SKVNIGELVFALTRNI  185 (533)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~~--~~~d~~~~~~~~~~~~  185 (533)
                      ..-..  ......++..+|+.||++|..+ +|.|+.+.++.+-+.+ +.++++++.+.+...  ..+++.+.+.++|.|+
T Consensus       107 ~d~~~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DV  183 (499)
T KOG0158|consen  107 GDPED--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDV  183 (499)
T ss_pred             CCCCC--cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHH
Confidence            22111  2233567888899999999997 9999999999999999 999999999998543  4789999999999999


Q ss_pred             HHHHhhcCCCCC---chHHHHHHHHHHHHH-hccc----ccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009497          186 TYRAAFGSFSHD---GQDEFVKILQEFSKL-FGAF----NIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMK  257 (533)
Q Consensus       186 ~~~~~fG~~~~~---~~~~~~~~~~~~~~~-~~~~----~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (533)
                      |++++||.+.+.   ...++.......... ....    .....+|.+.....  .........+.+.+.+.+.++.|  
T Consensus       184 I~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~v~~~v~~R--  259 (499)
T KOG0158|consen  184 IGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLR--VKLFPEDVTDFFRKLVNSRVEQR--  259 (499)
T ss_pred             HhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhh--cccChHHHHHHHHHHHHHHHHHH--
Confidence            999999998873   233444333333222 1111    11222333222110  01112233444444455555544  


Q ss_pred             hhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHH
Q 009497          258 KKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASA  337 (533)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~  337 (533)
                        ...                 ....+|+++.++++..++.       .+......+|.+||++++..+++||.||||++
T Consensus       260 --~~~-----------------~~~r~Dfi~lll~~~~~~~-------~~~~~~~~lt~dei~aQafvFl~AGfeTts~t  313 (499)
T KOG0158|consen  260 --EKE-----------------NIERNDFIDLLLDARASDF-------AKSKSHKALTDDEIAAQAFVFLLAGFETTAST  313 (499)
T ss_pred             --Hhc-----------------CCCCchHHHHHHHhhcccc-------cccccccccCHHHHHHHHHHHHHhhhHhHHHH
Confidence              211                 1567899999999875411       00001115999999999999999999999999


Q ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceee-ceecCCCC
Q 009497          338 IEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVS-GYNIPAKS  416 (533)
Q Consensus       338 l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~-g~~ip~G~  416 (533)
                      +++++|+||+|||+|+|||+||+++..+...+|+|.+.+|+||++||+||||+||+++...|+|.+|++++ ++.||||+
T Consensus       314 lsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~  393 (499)
T KOG0158|consen  314 LSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGT  393 (499)
T ss_pred             HHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCC
Confidence            99999999999999999999999997765559999999999999999999999999999779999999999 99999999


Q ss_pred             EEEeehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCC
Q 009497          417 RVMINAWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDG  496 (533)
Q Consensus       417 ~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~  496 (533)
                      .|.++++++||||++||||++|+||||.+++.+  ...+..|+|||.|||.|+|++||.+|+|+.|++||++|+|+..+.
T Consensus       394 ~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~--~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~  471 (499)
T KOG0158|consen  394 PVMIPTYALHHDPEYWPEPEKFKPERFEEENNK--SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT  471 (499)
T ss_pred             EEEeecccccCCcccCCCcccCCCccCCCCccc--ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc
Confidence            999999999999999999999999999977632  345678999999999999999999999999999999999999884


Q ss_pred             CCCCCCCcccccCCcCCCccceeEEeeecc
Q 009497          497 MSPGELDMNDMFGLTAPKACRLVAVPSYRL  526 (533)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                      ..+ . ...+..+.+..|++++.+++.+|.
T Consensus       472 t~~-~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  472 TII-P-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccC-c-ccCCccceeeecCCceEEEEEeCC
Confidence            322 2 333334777889999999999984


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1e-76  Score=601.24  Aligned_cols=462  Identities=36%  Similarity=0.727  Sum_probs=375.9

Q ss_pred             CCCCCCCCCCCCceeecccccCccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchhh
Q 009497           34 KKLPYPPGPKGYPIIGNMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITY  113 (533)
Q Consensus        34 ~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~  113 (533)
                      .+.+.||||+++|++|+++.+..+++.++.+++++||+||++++|+.++|+|+||+++++++.++...|++++.......
T Consensus        28 ~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~  107 (504)
T PLN00110         28 PSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATH  107 (504)
T ss_pred             ccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhh
Confidence            45688999999999999988776789999999999999999999999999999999999999988778888775443332


Q ss_pred             hccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCeechhHHHHHHHHHHHHHHh
Q 009497          114 LTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSKVNIGELVFALTRNITYRAA  190 (533)
Q Consensus       114 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~~~~~~  190 (533)
                      ...+..+++++.+|+.|+++|+.+..+.|+++.++.+.+.+ +++..+++.+.+.  .|+++|+.+++..+++|+++.++
T Consensus       108 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~  187 (504)
T PLN00110        108 LAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVI  187 (504)
T ss_pred             hccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHH
Confidence            33334567888889999999999855689999999999988 8899999988753  36789999999999999999999


Q ss_pred             hcCCCC-C---chHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 009497          191 FGSFSH-D---GQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRD  266 (533)
Q Consensus       191 fG~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  266 (533)
                      ||.++. .   ...++...+..+............+|++.+.......++..+..+.+.+++.+.++++++.....    
T Consensus       188 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----  263 (504)
T PLN00110        188 LSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER----  263 (504)
T ss_pred             hCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----
Confidence            998762 1   12345555555444333333344556554322222345566667778888888888766543211    


Q ss_pred             ccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHh
Q 009497          267 EEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELM  346 (533)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~  346 (533)
                                    ....|+++.+++.....            .+..++++++..+++++++||+|||+++++|++++|+
T Consensus       264 --------------~~~~d~l~~ll~~~~~~------------~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~  317 (504)
T PLN00110        264 --------------KGNPDFLDVVMANQENS------------TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEML  317 (504)
T ss_pred             --------------ccCCChhhHHhhccccc------------CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHH
Confidence                          22458999999754322            1246899999999999999999999999999999999


Q ss_pred             hCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCccc-cccccccceeeceecCCCCEEEeehhhh
Q 009497          347 KSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLL-LHETASNTVVSGYNIPAKSRVMINAWAI  425 (533)
Q Consensus       347 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~~~~i~g~~ip~G~~v~~~~~~~  425 (533)
                      +||++|+|+++|++++++.++.++.+++++|||++|||+||||++|+++.. .|.+.+|++++||.|||||.|+++.+++
T Consensus       318 ~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~  397 (504)
T PLN00110        318 KNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAI  397 (504)
T ss_pred             hCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHh
Confidence            999999999999999998777899999999999999999999999999985 5999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccCCCCCCCCC--CCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCC
Q 009497          426 GRDPSAWEDPDKFNPARFLHENAPDFT--GNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELD  503 (533)
Q Consensus       426 ~~d~~~~~~p~~F~PeR~l~~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~  503 (533)
                      |+||++|+||++|+||||++++.....  .....++|||.|+|.|+|++||++|+++++++|+++||+++.++.   +.+
T Consensus       398 h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~  474 (504)
T PLN00110        398 GRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELN  474 (504)
T ss_pred             cCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccC
Confidence            999999999999999999965421111  123479999999999999999999999999999999999987764   233


Q ss_pred             cccccCCcCCCccceeEEeeeccCC
Q 009497          504 MNDMFGLTAPKACRLVAVPSYRLTC  528 (533)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~r~~~  528 (533)
                      ....++++..++.++.+++++|.++
T Consensus       475 ~~~~~~~~~~~~~~~~~~~~~r~~~  499 (504)
T PLN00110        475 MDEAFGLALQKAVPLSAMVTPRLHQ  499 (504)
T ss_pred             cccccccccccCCCceEeeccCCCc
Confidence            3344678888889999999999643


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.7e-76  Score=603.11  Aligned_cols=470  Identities=39%  Similarity=0.732  Sum_probs=379.4

Q ss_pred             cCCCCCCCCCCCCceeecccccCccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchh
Q 009497           33 RKKLPYPPGPKGYPIIGNMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAIT  112 (533)
Q Consensus        33 ~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~  112 (533)
                      +++.+.||||+++|++|++..+..+++.++.+++++||++|++++++.++|+++||+.+++++.++...|++++......
T Consensus        28 ~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~  107 (514)
T PLN03112         28 RKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAV  107 (514)
T ss_pred             cCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccce
Confidence            34578899999999999998887778999999999999999999999999999999999999998887888776533222


Q ss_pred             hhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCeechhHHHHHHHHHHHHHH
Q 009497          113 YLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSKVNIGELVFALTRNITYRA  189 (533)
Q Consensus       113 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~~~~~  189 (533)
                      ....+....++..+|+.|+++|+.+..+.|+.++++.+.+.+ ++++.+++.+.+.  .++++|+.+.++.+++++++.+
T Consensus       108 ~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~  187 (514)
T PLN03112        108 HLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRM  187 (514)
T ss_pred             eeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHH
Confidence            222333456677889999999999757889999999999988 9999999987653  3678999999999999999999


Q ss_pred             hhcCCCCC-c------hHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009497          190 AFGSFSHD-G------QDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKK  262 (533)
Q Consensus       190 ~fG~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (533)
                      +||.++.. .      ..++...+..+...........++|++.++.+....++.++..+.+.++++..++++++..+..
T Consensus       188 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  267 (514)
T PLN03112        188 LLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGK  267 (514)
T ss_pred             HcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99998631 1      1234444444433322223344556554432333446667778888888899998877653221


Q ss_pred             ccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHH
Q 009497          263 NVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAM  342 (533)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l  342 (533)
                      .               ......|+++.++++..++.            +..++++++.+++.++++||+|||+++++|++
T Consensus       268 ~---------------~~~~~~d~l~~ll~~~~~~~------------~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l  320 (514)
T PLN03112        268 L---------------PGGKDMDFVDVLLSLPGENG------------KEHMDDVEIKALMQDMIAAATDTSAVTNEWAM  320 (514)
T ss_pred             c---------------cCCccchHHHHHHHhhcccc------------ccCCCHHHHHHHHHHHhccccccHHHHHHHHH
Confidence            0               00234589999998543221            12589999999999999999999999999999


Q ss_pred             HHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCccc-cccccccceeeceecCCCCEEEee
Q 009497          343 AELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLL-LHETASNTVVSGYNIPAKSRVMIN  421 (533)
Q Consensus       343 ~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~~~~i~g~~ip~G~~v~~~  421 (533)
                      ++|++||++|+|+|+||+++++.++.++.+++++|||++|||+||+|++|+++.. .|.+.+|++++||.|||||.|.++
T Consensus       321 ~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~  400 (514)
T PLN03112        321 AEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFIN  400 (514)
T ss_pred             HHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEe
Confidence            9999999999999999999998877899999999999999999999999999986 599999999999999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCCccCCCCCCC---CCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCC
Q 009497          422 AWAIGRDPSAWEDPDKFNPARFLHENAPD---FTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMS  498 (533)
Q Consensus       422 ~~~~~~d~~~~~~p~~F~PeR~l~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~  498 (533)
                      .+.+||||++|+||++||||||..+.+..   .......|+|||.|+|.|+|++||++|+++++++||++|||++.++..
T Consensus       401 ~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  480 (514)
T PLN03112        401 THGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLR  480 (514)
T ss_pred             hHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCC
Confidence            99999999999999999999987543111   112345799999999999999999999999999999999999876643


Q ss_pred             CCCCCcccccCCcCCCccceeEEeeeccCCC
Q 009497          499 PGELDMNDMFGLTAPKACRLVAVPSYRLTCP  529 (533)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  529 (533)
                      +++++....+++++++++++.++++||....
T Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  511 (514)
T PLN03112        481 PEDIDTQEVYGMTMPKAKPLRAVATPRLAPH  511 (514)
T ss_pred             cccCCCccccCcccccCCCeEEEeecCCccc
Confidence            4455555667788778889999999998654


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.3e-76  Score=606.00  Aligned_cols=462  Identities=30%  Similarity=0.527  Sum_probs=363.7

Q ss_pred             CCCCCCCCCCCceeecccccCc-c-chhHHHHHHHHhC-CeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccch
Q 009497           35 KLPYPPGPKGYPIIGNMAMMDQ-L-THRGLADLAKKYG-GLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAI  111 (533)
Q Consensus        35 ~~~~ppgP~~~P~lG~~~~~~~-~-~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~  111 (533)
                      +.+.||||+++|++|+++.+.. . .+.++.+|.++|| +||++++|+.++|+|+||+.+++++.+++..|++++.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            4578999999999999987733 2 3678999999999 89999999999999999999999999988888888754333


Q ss_pred             hhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCeechhHHHHHHHHHHHHH
Q 009497          112 TYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSKVNIGELVFALTRNITYR  188 (533)
Q Consensus       112 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~~~~  188 (533)
                      ...+.+..+.++..+|+.|+++||.+..+++++...+.+.+++ ++++.+++.+.+.  .++++|+.+.+..++++++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            3232222346888889999999999867788887777788888 7888888777653  356899999999999999999


Q ss_pred             HhhcCCCCCc-----h---HHHHHHHHHHHHHhcc---cccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009497          189 AAFGSFSHDG-----Q---DEFVKILQEFSKLFGA---FNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMK  257 (533)
Q Consensus       189 ~~fG~~~~~~-----~---~~~~~~~~~~~~~~~~---~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (533)
                      ++||.++.+.     +   .+....+..+......   ....+++|++.++......+...+..+.+.+++.++++++++
T Consensus       215 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  294 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIK  294 (543)
T ss_pred             HHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999876311     1   1222333333222111   122344555443211223344555677788888888888765


Q ss_pred             hhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHH
Q 009497          258 KKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASA  337 (533)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~  337 (533)
                      ..+.+.                .....|+++.+++...++.            ...++++++..++.++++||+|||+++
T Consensus       295 ~~~~~~----------------~~~~~d~l~~ll~~~~~~~------------~~~ls~~~i~~~~~~l~~AG~dTTa~t  346 (543)
T PLN02971        295 MWREGK----------------RTQIEDFLDIFISIKDEAG------------QPLLTADEIKPTIKELVMAAPDNPSNA  346 (543)
T ss_pred             HHhccC----------------CCCCcCHHHHHHhhhcccC------------CCCCCHHHHHHhHHHHheeccchHHHH
Confidence            432210                0123689999998543221            124899999999999999999999999


Q ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCcccc-ccccccceeeceecCCCC
Q 009497          338 IEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLL-HETASNTVVSGYNIPAKS  416 (533)
Q Consensus       338 l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~~~~i~g~~ip~G~  416 (533)
                      ++|++++|++||++|+|+|+||+++++.++.++.+++++|||++|||+|+||++|++|... |.+.+|++++||.|||||
T Consensus       347 l~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt  426 (543)
T PLN02971        347 VEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGS  426 (543)
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCC
Confidence            9999999999999999999999999998888999999999999999999999999999854 999999999999999999


Q ss_pred             EEEeehhhhccCCCCCCCCCCCCCCccCCCCCCC-CCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCC
Q 009497          417 RVMINAWAIGRDPSAWEDPDKFNPARFLHENAPD-FTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPD  495 (533)
Q Consensus       417 ~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~  495 (533)
                      .|+++.|++||||++|+||++|+||||++++... ....+..|+|||.|+|.|+|++||++|+++++|+||++|+|++++
T Consensus       427 ~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  506 (543)
T PLN02971        427 QVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAG  506 (543)
T ss_pred             EEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCC
Confidence            9999999999999999999999999999754211 112345799999999999999999999999999999999999887


Q ss_pred             CCCCCCCCcccccCCcCCCccceeEEeeeccC
Q 009497          496 GMSPGELDMNDMFGLTAPKACRLVAVPSYRLT  527 (533)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  527 (533)
                      +..  +.+....++ ++..++++.+.++||-+
T Consensus       507 ~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~  535 (543)
T PLN02971        507 SET--RVELMESSH-DMFLSKPLVMVGELRLS  535 (543)
T ss_pred             CCC--CcchhhhcC-cccccccceeeeeecCC
Confidence            542  355556666 66456689999999844


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.9e-75  Score=592.74  Aligned_cols=476  Identities=33%  Similarity=0.578  Sum_probs=360.9

Q ss_pred             HHHHHHHHHHHhhhcCCCCCCCCCCCCceeecccccCcc-chhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHh
Q 009497           19 PLLLAFVLFSLTTLRKKLPYPPGPKGYPIIGNMAMMDQL-THRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQA   97 (533)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~ppgP~~~P~lG~~~~~~~~-~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~   97 (533)
                      ++++++.++......++.+.||||+++|++|+++.+..+ .+..+.+|+++||+||++++|++++|+|+||+.+++++.+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~   91 (503)
T PLN02394         12 FVAIVLALLVSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHT   91 (503)
T ss_pred             HHHHHHHHHHHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHh
Confidence            333333333445556778999999999999999887544 5789999999999999999999999999999999999998


Q ss_pred             CCcccCCCCcccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhc---CCeec
Q 009497           98 QDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTT---GSKVN  173 (533)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~---~~~~d  173 (533)
                      ++..|.+++...........+.+.+++.+|+.|+++||.+..++|+.+.++.+.+.+ ++++++++.|.+..   ++.++
T Consensus        92 ~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~  171 (503)
T PLN02394         92 QGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVV  171 (503)
T ss_pred             CCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEe
Confidence            777777665443333332223456788889999999999756999999999988888 99999999987632   34689


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHH----HHhcc--cccccchhhhcccccccHHHHHHHHHHHHHH-
Q 009497          174 IGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFS----KLFGA--FNIADFFPWMGWINARGFYKRMARARESLDG-  246 (533)
Q Consensus       174 ~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~-  246 (533)
                      +.+.+..+++|++++++||.+++...+.....+....    .....  .....++|++.... ....+........... 
T Consensus       172 ~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  250 (503)
T PLN02394        172 IRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLAL  250 (503)
T ss_pred             cHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988643222222222221    11111  11223344433211 1111222222222222 


Q ss_pred             HHHHHHHHHHHhhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHH
Q 009497          247 FIDSIIDEHMKKKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDV  326 (533)
Q Consensus       247 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~  326 (533)
                      +.+.+++++++..+..+.              ..+...|+++.++++..+               ..++++++..++.++
T Consensus       251 ~~~~~i~~~~~~~~~~~~--------------~~~~~~d~l~~ll~~~~~---------------~~l~~~~i~~~~~~~  301 (503)
T PLN02394        251 FKDYFVDERKKLMSAKGM--------------DKEGLKCAIDHILEAQKK---------------GEINEDNVLYIVENI  301 (503)
T ss_pred             HHHHHHHHHHHHhhhccC--------------CcchhhhHHHHHHhcccc---------------CCCCHHHHHHHHHHH
Confidence            233455555443221100              002346899999976432               258999999999999


Q ss_pred             HhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCcccc-ccccccc
Q 009497          327 MFGGTETVASAIEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLL-HETASNT  405 (533)
Q Consensus       327 ~~AG~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~~~  405 (533)
                      ++||+|||+++++|++|+|++||++|+|||+||+++++.++.++.+++++||||+|||+|+||++|+++... |.+.+|+
T Consensus       302 ~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~  381 (503)
T PLN02394        302 NVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDA  381 (503)
T ss_pred             HHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCc
Confidence            999999999999999999999999999999999999987777899999999999999999999999999986 8889999


Q ss_pred             eeeceecCCCCEEEeehhhhccCCCCCCCCCCCCCCccCCCCCC-CCCCCcccccccCCCCCCCcCchhHHHHHHHHHHH
Q 009497          406 VVSGYNIPAKSRVMINAWAIGRDPSAWEDPDKFNPARFLHENAP-DFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAH  484 (533)
Q Consensus       406 ~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~  484 (533)
                      +++||.|||||.|.++.|++||||++|+||++|+||||++++.. ........|+|||.|+|+|+|++||++|+++++|+
T Consensus       382 ~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~  461 (503)
T PLN02394        382 KLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGR  461 (503)
T ss_pred             ccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999965421 11223457999999999999999999999999999


Q ss_pred             HHhhceeecCCCCCCCCCCcccccC-CcCCCccceeEEeeecc
Q 009497          485 LLHCFNWELPDGMSPGELDMNDMFG-LTAPKACRLVAVPSYRL  526 (533)
Q Consensus       485 ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~  526 (533)
                      |+++|++++.++.+  .++....+| ..+..+.++.|++.||+
T Consensus       462 ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        462 LVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             HHHHceeEeCCCCC--cCccccccCceeeccCCCceEEeecCC
Confidence            99999999877642  233333343 44545679999999996


No 10 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.3e-74  Score=587.97  Aligned_cols=468  Identities=37%  Similarity=0.712  Sum_probs=363.2

Q ss_pred             HHhhhcCCCCCCCCCCCCceeeccccc-CccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCC
Q 009497           28 SLTTLRKKLPYPPGPKGYPIIGNMAMM-DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRP  106 (533)
Q Consensus        28 ~~~~~~~~~~~ppgP~~~P~lG~~~~~-~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~  106 (533)
                      +....+++.+.||||+++|++||++.+ ..+++.++.+|+++||++|++++++.++|+|+||+.+++++.++...|.+++
T Consensus        20 ~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~   99 (502)
T PLN02966         20 YQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP   99 (502)
T ss_pred             HhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCC
Confidence            333344556789999999999999887 4578999999999999999999999999999999999999998776776655


Q ss_pred             cccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCeechhHHHHHHHH
Q 009497          107 ANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSKVNIGELVFALTR  183 (533)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~  183 (533)
                      ..........+..+..+..+|+.|+++|+.+..++|++++++.+.+.+ ++++++++.|.+.  .++.+|+.+++..+++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~  179 (502)
T PLN02966        100 PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTN  179 (502)
T ss_pred             CCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Confidence            433222222223334456679999999999558999999999999999 9999999999763  3567999999999999


Q ss_pred             HHHHHHhhcCCCCCchHHHHHHHHHH---HHHhcccccccchhhhcccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009497          184 NITYRAAFGSFSHDGQDEFVKILQEF---SKLFGAFNIADFFPWMGWIN-ARGFYKRMARARESLDGFIDSIIDEHMKKK  259 (533)
Q Consensus       184 ~~~~~~~fG~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (533)
                      |+++.++||.++++..++.....+.+   ...........++|++..+. .....+......+...+++++.++++.+..
T Consensus       180 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (502)
T PLN02966        180 SVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK  259 (502)
T ss_pred             HHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999998874433333333333   22222222334445432110 111123334455566677777776654421


Q ss_pred             hccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHH
Q 009497          260 KKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIE  339 (533)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~  339 (533)
                      ...                  ....|+++.+++..+++.           .+..++.+++.++++++++||+|||+.+++
T Consensus       260 ~~~------------------~~~~~~l~~l~~~~~~~~-----------~~~~l~~~~i~~~~~~l~~AG~eTta~~l~  310 (502)
T PLN02966        260 RVK------------------PETESMIDLLMEIYKEQP-----------FASEFTVDNVKAVILDIVVAGTDTAAAAVV  310 (502)
T ss_pred             ccc------------------cccccHHHHHHHHHhccC-----------cCCCCCHHHHHHHHHHHHhccccchHHHHH
Confidence            110                  224589999997654321           123589999999999999999999999999


Q ss_pred             HHHHHHhhCchHHHHHHHHHHHHhcC--CcccCcccccCCcchhHHHHHhhcCCCCCccc-cccccccceeeceecCCCC
Q 009497          340 WAMAELMKSPYDLKKVQEELAEKVGL--TRILHDSDLKQLTYLKCCIKETLRLHPPIPLL-LHETASNTVVSGYNIPAKS  416 (533)
Q Consensus       340 ~~l~~L~~~p~~~~~lr~Ei~~~~~~--~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~~~~i~g~~ip~G~  416 (533)
                      |++++|++||++|+|+++||+++++.  ++.++.+++++||||+|||+|+||++|+++.. .|.+.+|++++||.|||||
T Consensus       311 ~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt  390 (502)
T PLN02966        311 WGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGT  390 (502)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCC
Confidence            99999999999999999999999874  24579999999999999999999999999986 5999999999999999999


Q ss_pred             EEEeehhhhccCCCCC-CCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCC
Q 009497          417 RVMINAWAIGRDPSAW-EDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPD  495 (533)
Q Consensus       417 ~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~  495 (533)
                      .|.++.|++||||++| +||++|+||||++++. ........|+|||.|+|+|+|++||++|+++++|+||++|+|++.+
T Consensus       391 ~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~-~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~  469 (502)
T PLN02966        391 TVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEV-DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPN  469 (502)
T ss_pred             EEEEecccccCCcccccCChhhCChhhhcCCCC-CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCC
Confidence            9999999999999999 9999999999996542 1122456799999999999999999999999999999999999988


Q ss_pred             CCCCCCCCcccccCCcCCCccceeEEeeec
Q 009497          496 GMSPGELDMNDMFGLTAPKACRLVAVPSYR  525 (533)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  525 (533)
                      +..++.++.....|++..++.++.+..++.
T Consensus       470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (502)
T PLN02966        470 GMKPDDINMDVMTGLAMHKSQHLKLVPEKV  499 (502)
T ss_pred             CCCcccCCcccccCeeeccCCCeEEEEEeC
Confidence            754445555555677665555676655554


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1e-74  Score=587.25  Aligned_cols=446  Identities=24%  Similarity=0.401  Sum_probs=350.5

Q ss_pred             cCCCCCCCCCCCCceeecccccCccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchh
Q 009497           33 RKKLPYPPGPKGYPIIGNMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAIT  112 (533)
Q Consensus        33 ~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~  112 (533)
                      +++...+|||+++|++|++..+..+++..+.+++++||++|++++|+.++|+++||+++++++.++...|.+++......
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  104 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK  104 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence            34578889999999999998887789999999999999999999999999999999999999997766676665443322


Q ss_pred             hhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCeechhHHHHHHHHHHHHHH
Q 009497          113 YLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSKVNIGELVFALTRNITYRA  189 (533)
Q Consensus       113 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~~~~~  189 (533)
                      ...  ..+++++.+|+.|+++|+.+ .+.|+...++.+.+.+ ++++++++.|.+.  .++.+|+.+++..+++|+++.+
T Consensus       105 ~~~--~~~~l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  181 (482)
T PTZ00404        105 HGT--FYHGIVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKY  181 (482)
T ss_pred             eec--cCCceeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHH
Confidence            111  13456777899999999997 8999999999999988 9999999999763  3667999999999999999999


Q ss_pred             hhcCCCCCc----h---HHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009497          190 AFGSFSHDG----Q---DEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKK  262 (533)
Q Consensus       190 ~fG~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (533)
                      +||.+++..    +   .++...+..+............++++.... ........+..+.+.+++.+.+++++++.+. 
T Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  259 (482)
T PTZ00404        182 IFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP-  259 (482)
T ss_pred             HhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-
Confidence            999987532    1   233333333333222222222222222111 1111223344556666666666554432110 


Q ss_pred             ccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHH
Q 009497          263 NVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAM  342 (533)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l  342 (533)
                                        ....|+++.++++..+.              .....+++.+++.++++||+|||+++++|++
T Consensus       260 ------------------~~~~dll~~ll~~~~~~--------------~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l  307 (482)
T PTZ00404        260 ------------------EVPRDLLDLLIKEYGTN--------------TDDDILSILATILDFFLAGVDTSATSLEWMV  307 (482)
T ss_pred             ------------------CCcccHHHHHHHHhccC--------------CcccHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence                              23468999999764221              1223456899999999999999999999999


Q ss_pred             HHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCccc-ccccccccee-eceecCCCCEEEe
Q 009497          343 AELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLL-LHETASNTVV-SGYNIPAKSRVMI  420 (533)
Q Consensus       343 ~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~~~~i-~g~~ip~G~~v~~  420 (533)
                      ++|++||++|+||++||+++++.++.++.+++++||||+|||+||||++|+++.. .|.+.+|+++ +||.|||||.|.+
T Consensus       308 ~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~  387 (482)
T PTZ00404        308 LMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILI  387 (482)
T ss_pred             HHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEe
Confidence            9999999999999999999998767789999999999999999999999999974 6999999999 9999999999999


Q ss_pred             ehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCC
Q 009497          421 NAWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPG  500 (533)
Q Consensus       421 ~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~  500 (533)
                      +.+++|+||++|+||++|+||||+++.      ....|+|||.|+|.|+|++||++|+++++++|+++|++++.++.   
T Consensus       388 ~~~a~hrdp~~~~dP~~F~PeRwl~~~------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---  458 (482)
T PTZ00404        388 NYYSLGRNEKYFENPEQFDPSRFLNPD------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---  458 (482)
T ss_pred             eHHHhhCCccccCCccccCccccCCCC------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---
Confidence            999999999999999999999998643      34579999999999999999999999999999999999987653   


Q ss_pred             CCCcccccCCcCCCccceeEEeeec
Q 009497          501 ELDMNDMFGLTAPKACRLVAVPSYR  525 (533)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~~~~~~~r  525 (533)
                      +.......++++. +.++.|++++|
T Consensus       459 ~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        459 KIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             CCCcccccceeec-CCCceeeeecC
Confidence            2222223566665 56788988877


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=9.5e-74  Score=583.44  Aligned_cols=472  Identities=26%  Similarity=0.416  Sum_probs=362.9

Q ss_pred             CCCCCCCCCCCCceeecccccC---ccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccc
Q 009497           34 KKLPYPPGPKGYPIIGNMAMMD---QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVA  110 (533)
Q Consensus        34 ~~~~~ppgP~~~P~lG~~~~~~---~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~  110 (533)
                      ++.+.||||+++|++|++..+.   .+++.++.+++++||++|++++|+.++|+|+||+++++++.++...|+.++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            3467889999999999987653   3577899999999999999999999999999999999999988888887765332


Q ss_pred             hhhhccCCCCeEe-cCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhc--CCeechhHHHHHHHHHHH
Q 009497          111 ITYLTYDRADMAF-ANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTT--GSKVNIGELVFALTRNIT  186 (533)
Q Consensus       111 ~~~~~~~~~~~~~-~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~--~~~~d~~~~~~~~~~~~~  186 (533)
                      ....+.+ .+.+. ..+|+.|+++||.+..++|+.++++.+.+.+ ++++.+++.|.+..  ++.+|+.+.+..++.+++
T Consensus       112 ~~~~~~~-~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        112 SRLLGES-DNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             hhhhccC-CCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            2222211 12232 3679999999986569999999999999999 99999999997643  346899999999999999


Q ss_pred             HHHhhcCCCCCch-HHHHHHHHHHHHHh-cccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009497          187 YRAAFGSFSHDGQ-DEFVKILQEFSKLF-GAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNV  264 (533)
Q Consensus       187 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  264 (533)
                      ..++||.++++.. ..+......+.... .......++|.+.+.......++..+..+.+.+++..+++++++.......
T Consensus       191 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  270 (519)
T PLN00168        191 VLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQ  270 (519)
T ss_pred             HHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            9999999886432 22323333222211 122233445543322112224455667888888999999887664321000


Q ss_pred             ccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHH
Q 009497          265 RDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAE  344 (533)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~  344 (533)
                      ..       ...+.......|+++.|++....++           .+..++++++..++.++++||+|||+++++|++++
T Consensus       271 ~~-------~~~~~~~~~~~d~l~~ll~~~~~~~-----------~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~  332 (519)
T PLN00168        271 GG-------EPPKKETTFEHSYVDTLLDIRLPED-----------GDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAE  332 (519)
T ss_pred             cC-------ccccccccccccHHHHHHhhhcccc-----------ccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence            00       0000000124589999997543221           11369999999999999999999999999999999


Q ss_pred             HhhCchHHHHHHHHHHHHhcCC-cccCcccccCCcchhHHHHHhhcCCCCCcccc-ccccccceeeceecCCCCEEEeeh
Q 009497          345 LMKSPYDLKKVQEELAEKVGLT-RILHDSDLKQLTYLKCCIKETLRLHPPIPLLL-HETASNTVVSGYNIPAKSRVMINA  422 (533)
Q Consensus       345 L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~~~~i~g~~ip~G~~v~~~~  422 (533)
                      |++||++|+|+++||+++++.+ +.++.+++++||||+|||+|++|++|+++... |.+.+|++++||.|||||.|.++.
T Consensus       333 L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~  412 (519)
T PLN00168        333 LVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMV  412 (519)
T ss_pred             HHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEECh
Confidence            9999999999999999999753 67899999999999999999999999998874 999999999999999999999999


Q ss_pred             hhhccCCCCCCCCCCCCCCccCCCCCCC---CC-CCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCC
Q 009497          423 WAIGRDPSAWEDPDKFNPARFLHENAPD---FT-GNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMS  498 (533)
Q Consensus       423 ~~~~~d~~~~~~p~~F~PeR~l~~~~~~---~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~  498 (533)
                      +++||||++|+||++|+||||+++....   .. .....|+|||+|+|+|+|++||++|+++++++|+++|+|++.++..
T Consensus       413 ~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~  492 (519)
T PLN00168        413 AEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE  492 (519)
T ss_pred             HHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc
Confidence            9999999999999999999999743111   11 1235799999999999999999999999999999999999876532


Q ss_pred             CCCCCcccccCCcCCCccceeEEeeeccC
Q 009497          499 PGELDMNDMFGLTAPKACRLVAVPSYRLT  527 (533)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  527 (533)
                         ++.....+.+..++.++.+++++|+.
T Consensus       493 ---~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        493 ---VDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             ---CChhhhceeEEeecCCcEEEEEeccC
Confidence               22222234555667789999999975


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.1e-73  Score=580.79  Aligned_cols=453  Identities=21%  Similarity=0.317  Sum_probs=355.7

Q ss_pred             CCCCCCCCCCCceeecccccCc-------------------cchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHH
Q 009497           35 KLPYPPGPKGYPIIGNMAMMDQ-------------------LTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVL   95 (533)
Q Consensus        35 ~~~~ppgP~~~P~lG~~~~~~~-------------------~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl   95 (533)
                      +.+.||||+++|++||++.+..                   .....+.+|+++||++|++++|+.++|+|+||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            4677999999999999877632                   122356889999999999999999999999999999999


Q ss_pred             HhCCcccCCCCcccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhc--C-Ce
Q 009497           96 QAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTT--G-SK  171 (533)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~--~-~~  171 (533)
                      .++. .+..++...........+ ++++..+|+.|+++||.+ .+.|+..+++.+.+.+ ++++++++.|.+..  + .+
T Consensus       120 ~~~~-~~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKYN-TVTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcCC-CCCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            9763 344444221111111112 346667899999999997 7999999999999999 99999999997632  3 57


Q ss_pred             echhHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHH
Q 009497          172 VNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSI  251 (533)
Q Consensus       172 ~d~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (533)
                      +|+.+.+..+++|++++++||.++++. +++...+..+............+|++.++ +....++.....+.+.+++.+.
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~~~~~~~~~  274 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKG-KQIFHLLTVLQRLCAQATRHLCFPGSRFF-PSKYNREIKSLKGEVERLLMEI  274 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccc-hHHHHHHHHHHHHHHHhhhhhcCchhhhC-CChhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988644 33444444333322211111223433322 2233455666778888899999


Q ss_pred             HHHHHHhhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhccc
Q 009497          252 IDEHMKKKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGT  331 (533)
Q Consensus       252 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~  331 (533)
                      ++++++..+.+.               ......|+++.+++...+...          .+..++++++.+++.++++||+
T Consensus       275 i~~~~~~~~~~~---------------~~~~~~d~l~~ll~~~~~~~~----------~~~~l~~~~i~~~~~~~~~AG~  329 (516)
T PLN02290        275 IQSRRDCVEIGR---------------SSSYGDDLLGMLLNEMEKKRS----------NGFNLNLQLIMDECKTFFFAGH  329 (516)
T ss_pred             HHHHHHHhhccc---------------CCCCCCCHHHHHHHhccccCC----------CCCCCCHHHHHHHHHHHHhhhH
Confidence            988776543210               002346899999975432210          1135889999999999999999


Q ss_pred             ccHHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeecee
Q 009497          332 ETVASAIEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYN  411 (533)
Q Consensus       332 ~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~  411 (533)
                      |||+++++|++++|++||++|+|+|+||+++++.+ .++.+++++||||+|||+||||++|+++...|.+.+|++++||.
T Consensus       330 dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~  408 (516)
T PLN02290        330 ETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLH  408 (516)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEE
Confidence            99999999999999999999999999999999864 78999999999999999999999999998779999999999999


Q ss_pred             cCCCCEEEeehhhhccCCCCC-CCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhce
Q 009497          412 IPAKSRVMINAWAIGRDPSAW-EDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFN  490 (533)
Q Consensus       412 ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~  490 (533)
                      |||||.|+++.|++||||++| +||++|+||||+++..    .....|+|||.|+|.|+|++||++|+++++++|+++|+
T Consensus       409 IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~  484 (516)
T PLN02290        409 IPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFS  484 (516)
T ss_pred             ECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhce
Confidence            999999999999999999999 8999999999995421    12346999999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCCcccccCCcCCCccceeEEeeeccC
Q 009497          491 WELPDGMSPGELDMNDMFGLTAPKACRLVAVPSYRLT  527 (533)
Q Consensus       491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  527 (533)
                      +++.++..+     ....+.+..|+.++.+++++|++
T Consensus       485 ~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        485 FTISDNYRH-----APVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             EeeCCCccc-----CccceeeecCCCCCeEEEEeCCC
Confidence            998766321     11235677889999999999975


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=8.4e-73  Score=569.26  Aligned_cols=446  Identities=25%  Similarity=0.462  Sum_probs=354.4

Q ss_pred             CCCCCCCceeecccccC-ccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchhhhccC
Q 009497           39 PPGPKGYPIIGNMAMMD-QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYD  117 (533)
Q Consensus        39 ppgP~~~P~lG~~~~~~-~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~~~~~  117 (533)
                      ||||+++|++||++.+. .+++..+.+|+++||++|++++|+.++|+|+||+.+++++.++...|++++......... +
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~-~   79 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLT-R   79 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHh-c
Confidence            78999999999998884 568999999999999999999999999999999999999998888887776443333222 2


Q ss_pred             CCCeEec-CCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh----cCCeechhHHHHHHHHHHHHHHhh
Q 009497          118 RADMAFA-NYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT----TGSKVNIGELVFALTRNITYRAAF  191 (533)
Q Consensus       118 ~~~~~~~-~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~----~~~~~d~~~~~~~~~~~~~~~~~f  191 (533)
                      ....++. .+|+.|+++|+.+..++|+....+.+.+++ +.++.+++.+.+.    .++++|+.+.++.+++|+++.++|
T Consensus        80 ~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  159 (466)
T PLN02655         80 DKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQAL  159 (466)
T ss_pred             CCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHh
Confidence            2233433 468999999998778889988888888887 7777777777542    367899999999999999999999


Q ss_pred             cCCCCCch-----------HHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009497          192 GSFSHDGQ-----------DEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKK  260 (533)
Q Consensus       192 G~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (533)
                      |.+++...           ..+...+..+........+..++|.+.++......+...+....+.+++++++++++++..
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        160 GEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             ccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            98866321           1122222333222222233456665554322222333333344456777778777665432


Q ss_pred             ccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHH
Q 009497          261 KKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEW  340 (533)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~  340 (533)
                      .+                  ....|+++.+++..                 ..++++++.+++.++++||+|||+++++|
T Consensus       240 ~~------------------~~~~d~l~~ll~~~-----------------~~ls~~~i~~~~~~~~~ag~dtta~~l~~  284 (466)
T PLN02655        240 RG------------------EERDCYLDFLLSEA-----------------THLTDEQLMMLVWEPIIEAADTTLVTTEW  284 (466)
T ss_pred             CC------------------CCcccHHHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21                  22358999999742                 25899999999999999999999999999


Q ss_pred             HHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCcccc-ccccccceeeceecCCCCEEE
Q 009497          341 AMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLL-HETASNTVVSGYNIPAKSRVM  419 (533)
Q Consensus       341 ~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~~~~i~g~~ip~G~~v~  419 (533)
                      ++++|++||++|+|+|+||+++++.+. ++.+++++||||+||++||||++|+++... |.+.+|++++||.|||||.|+
T Consensus       285 ~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~  363 (466)
T PLN02655        285 AMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIA  363 (466)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEE
Confidence            999999999999999999999998654 999999999999999999999999999985 999999999999999999999


Q ss_pred             eehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCC
Q 009497          420 INAWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSP  499 (533)
Q Consensus       420 ~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~  499 (533)
                      ++.+++||||++|+||++|+||||++++..  ......++|||+|+|.|+|++||+.|+++++++||++|++++.++.. 
T Consensus       364 ~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-  440 (466)
T PLN02655        364 INIYGCNMDKKRWENPEEWDPERFLGEKYE--SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-  440 (466)
T ss_pred             ecHHHhcCCcccCCChhccCccccCCCCcc--cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-
Confidence            999999999999999999999999975421  12335799999999999999999999999999999999999876632 


Q ss_pred             CCCCcccccCCcCCCccceeEEeeeccC
Q 009497          500 GELDMNDMFGLTAPKACRLVAVPSYRLT  527 (533)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~  527 (533)
                      .   .....+++..+++++.|++++|..
T Consensus       441 ~---~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        441 E---KEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             c---ccchhheeEeecCCcEEEEeecCC
Confidence            1   123457777788999999999874


No 15 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.1e-72  Score=569.22  Aligned_cols=439  Identities=22%  Similarity=0.344  Sum_probs=337.8

Q ss_pred             hhcCCCCCCCCCCCCceeeccccc-C----ccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCC
Q 009497           31 TLRKKLPYPPGPKGYPIIGNMAMM-D----QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANR  105 (533)
Q Consensus        31 ~~~~~~~~ppgP~~~P~lG~~~~~-~----~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~  105 (533)
                      .++++.+.||||+++|++||++.+ .    +.++.++.+++++||++|++++|++++|+|+||+++++++.+++..|..+
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            344567889999999999997643 1    35667889999999999999999999999999999999999877666543


Q ss_pred             CcccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHh-HHHHH-HHHHHHHHHHHhhcCCeechhHHHHHHHH
Q 009497          106 PANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREES-WASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTR  183 (533)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~-~~~~~-~~~~~l~~~l~~~~~~~~d~~~~~~~~~~  183 (533)
                      .........   +.+.++..+|+.|+++|+.+ .+.|+...++. +.+.+ +.+..+++.|.  .++.+|+.+.++.+++
T Consensus       112 ~~~~~~~~~---g~~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~vd~~~~~~~~~~  185 (490)
T PLN02500        112 YPRSIGGIL---GKWSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK--ENSTFSAQDEAKKFTF  185 (490)
T ss_pred             CchHHHHHh---CcccccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC--CCCCEEehHHHHHHHH
Confidence            221111111   22345556899999999997 68899888876 45555 77777777775  3457999999999999


Q ss_pred             HHHHHHhhcCCCCCc-hHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009497          184 NITYRAAFGSFSHDG-QDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKK  262 (533)
Q Consensus       184 ~~~~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (533)
                      +++++++||.+.++. ...+...+..+......  ....+|.       ...++..+..+.+.+++.+++++++++...+
T Consensus       186 ~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  256 (490)
T PLN02500        186 NLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS--APLNFPG-------TAYRKALKSRATILKFIERKMEERIEKLKEE  256 (490)
T ss_pred             HHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc--chhcCCC-------cccHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            999999999876532 12222222222221100  0001111       1124555677888888888988877654321


Q ss_pred             ccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHH
Q 009497          263 NVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAM  342 (533)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l  342 (533)
                      .               ......|+++.+++.                  ..++++++.+++.++++||+|||+++++|++
T Consensus       257 ~---------------~~~~~~d~l~~ll~~------------------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l  303 (490)
T PLN02500        257 D---------------ESVEEDDLLGWVLKH------------------SNLSTEQILDLILSLLFAGHETSSVAIALAI  303 (490)
T ss_pred             c---------------CCCCcchHHHHHHhc------------------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            0               001246899998873                  1589999999999999999999999999999


Q ss_pred             HHHhhCchHHHHHHHHHHHHhc-----CCcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCE
Q 009497          343 AELMKSPYDLKKVQEELAEKVG-----LTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSR  417 (533)
Q Consensus       343 ~~L~~~p~~~~~lr~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~  417 (533)
                      ++|++||++|+|+|+||+++++     .++.++.+++++|||++|||+||||++|+++...|.+.+|++++||.|||||.
T Consensus       304 ~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~  383 (490)
T PLN02500        304 FFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWK  383 (490)
T ss_pred             HHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCE
Confidence            9999999999999999999864     23468999999999999999999999999999889999999999999999999


Q ss_pred             EEeehhhhccCCCCCCCCCCCCCCccCCCCCCCC-----CCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceee
Q 009497          418 VMINAWAIGRDPSAWEDPDKFNPARFLHENAPDF-----TGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWE  492 (533)
Q Consensus       418 v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~  492 (533)
                      |+++.|++||||++|+||++|+||||++++....     ...+..|+|||.|+|.|+|++||++|+++++++|+++|+|+
T Consensus       384 V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~  463 (490)
T PLN02500        384 VLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWE  463 (490)
T ss_pred             EEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEE
Confidence            9999999999999999999999999996542111     01345799999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCcccccCCcCCCccceeEEeee
Q 009497          493 LPDGMSPGELDMNDMFGLTAPKACRLVAVPSY  524 (533)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (533)
                      +.++..  ..   . +..+ .++.++.|++++
T Consensus       464 ~~~~~~--~~---~-~~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        464 LAEADQ--AF---A-FPFV-DFPKGLPIRVRR  488 (490)
T ss_pred             EcCCCc--ce---e-cccc-cCCCCceEEEEe
Confidence            877642  11   1 1222 334688888765


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.3e-72  Score=564.40  Aligned_cols=454  Identities=27%  Similarity=0.450  Sum_probs=357.7

Q ss_pred             CCCCCCCCCCCceeecccccC---ccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccch
Q 009497           35 KLPYPPGPKGYPIIGNMAMMD---QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAI  111 (533)
Q Consensus        35 ~~~~ppgP~~~P~lG~~~~~~---~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~  111 (533)
                      +...||||.++|++|++..+.   .....++.++..+||++|+.++|+.++|+++||+.+++|+.++...+.+.+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            567889999999999999883   24667889999999999999999999999999999999997655555555444422


Q ss_pred             hhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhc-CCeechhHHHHHHHHHHHHHH
Q 009497          112 TYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTT-GSKVNIGELVFALTRNITYRA  189 (533)
Q Consensus       112 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~d~~~~~~~~~~~~~~~~  189 (533)
                      ..... |. +++..+|+.|+++||.+ .+.|+...++.+...+ +++..++..+.... ++.+|+.+.++++++|+++.+
T Consensus       113 ~~~~l-G~-gll~~~g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  113 LKPWL-GD-GLLFSDGEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHHHh-cC-ccccCCchHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            22222 33 44444599999999997 8999999999988888 88888777777644 444999999999999999999


Q ss_pred             hhcCCC-CCchHHHHHHHHHHHHHhcccccccchh-hhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 009497          190 AFGSFS-HDGQDEFVKILQEFSKLFGAFNIADFFP-WMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRDE  267 (533)
Q Consensus       190 ~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  267 (533)
                      +||... ++..++.....+.+......+......| +..++......++..++.+.+.++++++|.++++........+ 
T Consensus       190 ~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~-  268 (497)
T KOG0157|consen  190 AMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGE-  268 (497)
T ss_pred             hcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-
Confidence            999333 2222333333333333222222333344 3333223336788899999999999999999998765431100 


Q ss_pred             cccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhh
Q 009497          268 EGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELMK  347 (533)
Q Consensus       268 ~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~  347 (533)
                                  .....|+++.+.....                ..+++++|++++.++++||+|||+.+++|++++|+.
T Consensus       269 ------------~~~~~d~L~~~~~~~~----------------~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~  320 (497)
T KOG0157|consen  269 ------------EKKRLDFLDTLLLEED----------------KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAK  320 (497)
T ss_pred             ------------cchhhhHHHHHHHhcc----------------CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhc
Confidence                        0334677775332211                278999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHhcCCcc-cCcccccCCcchhHHHHHhhcCCCCCcccccccccccee-eceecCCCCEEEeehhhh
Q 009497          348 SPYDLKKVQEELAEKVGLTRI-LHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVV-SGYNIPAKSRVMINAWAI  425 (533)
Q Consensus       348 ~p~~~~~lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~~  425 (533)
                      ||++|+|+++|+++++++... ++..+.++|+||++||+|||||+|++|...|.+.+|+++ +||.||||+.|+++.+++
T Consensus       321 hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~  400 (497)
T KOG0157|consen  321 HPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYAL  400 (497)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHh
Confidence            999999999999999985332 333333469999999999999999999999999999999 489999999999999999


Q ss_pred             ccCCCCCC-CCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCCc
Q 009497          426 GRDPSAWE-DPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELDM  504 (533)
Q Consensus       426 ~~d~~~~~-~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~  504 (533)
                      |||+.+|+ ||++||||||+++.... ..++.+|+|||+|+|.|+|++||++||++++++++++|+|++..+..     .
T Consensus       401 ~r~~~~~~~dp~~F~PeRf~~~~~~~-~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~  474 (497)
T KOG0157|consen  401 HRDPRVWGEDPEEFDPERFLDGEEKA-KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----P  474 (497)
T ss_pred             ccCccccCCChhhcCccccCCCCCcC-CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----c
Confidence            99999995 99999999999754222 33467899999999999999999999999999999999999887642     3


Q ss_pred             ccccCCcCCCccceeEEeeecc
Q 009497          505 NDMFGLTAPKACRLVAVPSYRL  526 (533)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                      ...+.+++++++++.|+++||.
T Consensus       475 ~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  475 KPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             eeeeEEEEEecCCeEEEEEeCC
Confidence            3446888899999999999996


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.1e-70  Score=557.82  Aligned_cols=464  Identities=24%  Similarity=0.449  Sum_probs=350.9

Q ss_pred             CCCCCCCCCCceeecccccC-ccch-hHHHHHHHHh-CCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchh
Q 009497           36 LPYPPGPKGYPIIGNMAMMD-QLTH-RGLADLAKKY-GGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAIT  112 (533)
Q Consensus        36 ~~~ppgP~~~P~lG~~~~~~-~~~~-~~~~~~~~ky-G~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~  112 (533)
                      .+.||||+++|++|+++.+. +.++ .++.++.++| |+||++++|++++|+|+||+.+++++.+++..|++++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            34789999999999998873 3343 4566777776 7999999999999999999999999998888888887544433


Q ss_pred             hhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCeechhHHHHHHHHHHHHHH
Q 009497          113 YLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSKVNIGELVFALTRNITYRA  189 (533)
Q Consensus       113 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~~~~~  189 (533)
                      ....+..+.++..+|+.|+++|+.+...+++....+.+..+. .+++++++.+.+.  .++++|+.+.+..+++|+++++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            332222245556679999999999844445665556666666 6788999998753  3567999999999999999999


Q ss_pred             hhcCCCCC------chHH----HHHHHHHHHHH---hcccccccchh-hhcccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 009497          190 AFGSFSHD------GQDE----FVKILQEFSKL---FGAFNIADFFP-WMGWINARGFYKRMARARESLDGFIDSIIDEH  255 (533)
Q Consensus       190 ~fG~~~~~------~~~~----~~~~~~~~~~~---~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (533)
                      +||.++..      ....    +..........   .......+.+| ++.++.......+.......+.++++++++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  278 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDER  278 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998641      0111    11111211111   11111222333 33321111223344555667888888888887


Q ss_pred             HHhhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHH
Q 009497          256 MKKKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVA  335 (533)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~  335 (533)
                      ++......               +.....|+++.+++...+++            ...++++++..++.++++||+|||+
T Consensus       279 ~~~~~~~~---------------~~~~~~d~l~~ll~~~~~~~------------~~~ls~~~i~~~~~~~~~aG~dTta  331 (534)
T PLN03018        279 VELWREKG---------------GKAAVEDWLDTFITLKDQNG------------KYLVTPDEIKAQCVEFCIAAIDNPA  331 (534)
T ss_pred             HHHhhhcc---------------CCCCcccHHHHHHHhhcccC------------CCCCCHHHHHHHHHHHHHHhhhHHH
Confidence            66432110               00123689999997643321            0148999999999999999999999


Q ss_pred             HHHHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCcccc-ccccccceeeceecCC
Q 009497          336 SAIEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLL-HETASNTVVSGYNIPA  414 (533)
Q Consensus       336 ~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~~~~i~g~~ip~  414 (533)
                      .+++|++++|++||++|+|+++||+++++.++.++.+++.+||||+|||+|+||++|+++... |.+.+|++++||.|||
T Consensus       332 ~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~Ipk  411 (534)
T PLN03018        332 NNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPK  411 (534)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECC
Confidence            999999999999999999999999999987778999999999999999999999999999885 8999999999999999


Q ss_pred             CCEEEeehhhhccCCCCCCCCCCCCCCccCCCCCCCC----CCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhce
Q 009497          415 KSRVMINAWAIGRDPSAWEDPDKFNPARFLHENAPDF----TGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFN  490 (533)
Q Consensus       415 G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~  490 (533)
                      ||.|+++.|++|+||++|+||++|+||||+++++...    ......|+|||+|+|.|+|++||++|+++++++|+++|+
T Consensus       412 Gt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~  491 (534)
T PLN03018        412 GSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFN  491 (534)
T ss_pred             CCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhce
Confidence            9999999999999999999999999999996542111    123457999999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCCcccccCCcCCCccceeEEeeeccCCC
Q 009497          491 WELPDGMSPGELDMNDMFGLTAPKACRLVAVPSYRLTCP  529 (533)
Q Consensus       491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  529 (533)
                      +++.++..  ++++....+.+.. +.++.|+++||.+.+
T Consensus       492 ~~~~~~~~--~~~~~~~~~~~~~-p~~~~v~~~~R~~~~  527 (534)
T PLN03018        492 WKLHQDFG--PLSLEEDDASLLM-AKPLLLSVEPRLAPN  527 (534)
T ss_pred             EEeCCCCC--CCCccccccceec-CCCeEEEEEeccccc
Confidence            99876531  2333333354444 568999999996443


No 18 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.8e-72  Score=526.85  Aligned_cols=451  Identities=23%  Similarity=0.373  Sum_probs=374.9

Q ss_pred             CCCCCCCCCCceeeccccc----CccchhHHHHHHHHhCCeEEEe-eCCeeEEEEcCHHHHHHHHHhCCcccCCCC-ccc
Q 009497           36 LPYPPGPKGYPIIGNMAMM----DQLTHRGLADLAKKYGGLLHLQ-MGAIHVVAVSTPDMAKEVLQAQDLVFANRP-ANV  109 (533)
Q Consensus        36 ~~~ppgP~~~P~lG~~~~~----~~~~~~~~~~~~~kyG~v~~i~-~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~-~~~  109 (533)
                      ...+|||+.+|++|.++.+    ..+.|+.....+++||+||+.. +|+...|+|.||+.++.++++ +..++.++ .+.
T Consensus        49 ~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~-EG~~P~Rp~~~~  127 (519)
T KOG0159|consen   49 FEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRN-EGKYPFRPLLIE  127 (519)
T ss_pred             hhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhc-CCCCCCcccccc
Confidence            5667999999999998844    4678999999999999999999 899999999999999999995 44456664 222


Q ss_pred             ch--hhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhc-----CCeechhHHHHHH
Q 009497          110 AI--TYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTT-----GSKVNIGELVFAL  181 (533)
Q Consensus       110 ~~--~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~-----~~~~d~~~~~~~~  181 (533)
                      .+  ..-..+...+++..+|+.|.+.|..++..+.++++++.+.+.+ ..++++++.+....     ..+.|+.+.+..+
T Consensus       128 ~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  128 PWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence            11  1222345567888899999999999988999999999999998 99999999988743     2478999999999


Q ss_pred             HHHHHHHHhhcCCCC---C-chHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009497          182 TRNITYRAAFGSFSH---D-GQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMK  257 (533)
Q Consensus       182 ~~~~~~~~~fG~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (533)
                      +++.++.++||.+++   + .+++..++++.....+.......+.|-++.+..+..++++.++.+.+.+++.++|++..+
T Consensus       208 slEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~  287 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALE  287 (519)
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987   2 234444444444444433333344454444556778899999999999999999999998


Q ss_pred             hhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHH
Q 009497          258 KKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASA  337 (533)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~  337 (533)
                      +.+......             .+....++..|..                   ++++.+++..++++++.||.|||+++
T Consensus       288 ~l~~~~~~~-------------~~~~~~l~~~L~~-------------------~~l~~k~~~~~~~dll~aGvDTTs~t  335 (519)
T KOG0159|consen  288 ELEKQDSAG-------------SEYTGSLLELLLR-------------------KELSRKDAKANVMDLLAAGVDTTSNT  335 (519)
T ss_pred             HHHhccccc-------------cchhHHHHHHHHH-------------------ccCCHHHHHHHHHHHHHHhccchHHH
Confidence            886542110             0122334444444                   37899999999999999999999999


Q ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHhcC-CcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCC
Q 009497          338 IEWAMAELMKSPYDLKKVQEELAEKVGL-TRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKS  416 (533)
Q Consensus       338 l~~~l~~L~~~p~~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~  416 (533)
                      +.|+||.|++||++|++|++|+.++... +..++.+++.++|||+||||||+||||++++..|...+|.+++||.|||||
T Consensus       336 l~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT  415 (519)
T KOG0159|consen  336 LLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGT  415 (519)
T ss_pred             HHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCC
Confidence            9999999999999999999999999987 688999999999999999999999999999999999999999999999999


Q ss_pred             EEEeehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCC
Q 009497          417 RVMINAWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDG  496 (533)
Q Consensus       417 ~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~  496 (533)
                      .|.++.+.+.+||++|++|++|+||||++++.  ...++..++|||.|+|+|+||+||.+||-++||+|+++|+++..++
T Consensus       416 ~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~--~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~  493 (519)
T KOG0159|consen  416 LVVLFLYVLGRNPAYFPDPEEFLPERWLKPST--KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE  493 (519)
T ss_pred             eEEEeehhhccChhhCCCccccChhhhccccc--CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC
Confidence            99999999999999999999999999998763  3456778999999999999999999999999999999999998875


Q ss_pred             CCCCCCCcccccCCcCCCccceeEEeeecc
Q 009497          497 MSPGELDMNDMFGLTAPKACRLVAVPSYRL  526 (533)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                      .   ++  ...+.++..|..++.+++++|.
T Consensus       494 ~---pv--~~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  494 E---PV--EYVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             C---Cc--cceeEEEEcCCCCcceeeeeCC
Confidence            3   23  3345666678899999999986


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.4e-71  Score=558.22  Aligned_cols=434  Identities=22%  Similarity=0.294  Sum_probs=342.3

Q ss_pred             hhhcCCCCCCCCCCCCceeecccccCccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCccc
Q 009497           30 TTLRKKLPYPPGPKGYPIIGNMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANV  109 (533)
Q Consensus        30 ~~~~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~  109 (533)
                      ..++++.+.||||+++|++||++.+.++++.++.+++++||++|++++++.++++|+||+.+++++.++...+.......
T Consensus        24 ~~~~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  103 (463)
T PLN02774         24 EVRYSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQS  103 (463)
T ss_pred             hhccCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHH
Confidence            34445667889999999999998886778889999999999999999999999999999999999987666553322111


Q ss_pred             chhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHh-HHHHH-HHHHHHHHHHHhhcCCeechhHHHHHHHHHHHH
Q 009497          110 AITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREES-WASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNITY  187 (533)
Q Consensus       110 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~-~~~~~-~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~~~~  187 (533)
                      ....  . +.+++++.+|+.|+++|+.+ .+.|++..++. +.+.+ +.++++++.|.  .++++|+.+.+..++++++.
T Consensus       104 ~~~~--l-g~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~  177 (463)
T PLN02774        104 MLDI--L-GTCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD--GLKTIDIQEKTKEMALLSAL  177 (463)
T ss_pred             HHHH--h-CccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC--CCCCEEeeHHHHHHHHHHHH
Confidence            1111  1 22455667899999999997 78999998875 67777 77888888875  34579999999999999999


Q ss_pred             HHhhcCCCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 009497          188 RAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRDE  267 (533)
Q Consensus       188 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  267 (533)
                      .++||....+..+++..   .+.......   ..+|.   ..+....++..++.+.+.+++.+.+++++++.        
T Consensus       178 ~~~~g~~~~~~~~~~~~---~~~~~~~~~---~~~~~---~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------  240 (463)
T PLN02774        178 KQIAGTLSKPISEEFKT---EFFKLVLGT---LSLPI---DLPGTNYRSGVQARKNIVRMLRQLIQERRASG--------  240 (463)
T ss_pred             HHHcCCCChHHHHHHHH---HHHHHhccc---ccCCc---CCCChhhhHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence            99999865432222222   222221111   01121   11112234556678888888888888765431        


Q ss_pred             cccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhh
Q 009497          268 EGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELMK  347 (533)
Q Consensus       268 ~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~  347 (533)
                                   ....|+++.++....+.              ..++++++.+++.++++||+|||+++++|++++|++
T Consensus       241 -------------~~~~d~l~~ll~~~~~~--------------~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~  293 (463)
T PLN02774        241 -------------ETHTDMLGYLMRKEGNR--------------YKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHD  293 (463)
T ss_pred             -------------CCcccHHHHHHhCccCC--------------CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHc
Confidence                         23468999998732211              258999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHhcC---CcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEeehhh
Q 009497          348 SPYDLKKVQEELAEKVGL---TRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMINAWA  424 (533)
Q Consensus       348 ~p~~~~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~  424 (533)
                      ||++|+|+|+|++++++.   ++.++.+++++||||+|||+|+||++|+++...|.+.+|++++||.||||+.|+++.+.
T Consensus       294 ~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~  373 (463)
T PLN02774        294 HPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTRE  373 (463)
T ss_pred             CHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHH
Confidence            999999999999999863   35689999999999999999999999999987799999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCCc
Q 009497          425 IGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELDM  504 (533)
Q Consensus       425 ~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~  504 (533)
                      +|+||++|+||++|+||||++++.   . ....|+|||+|+|.|+|++||++|++++++.|+++|++++.++..+     
T Consensus       374 ~~rdp~~~~dP~~F~PeRfl~~~~---~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~-----  444 (463)
T PLN02774        374 INYDPFLYPDPMTFNPWRWLDKSL---E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL-----  444 (463)
T ss_pred             hcCCcccCCChhccCchhcCCCCc---C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc-----
Confidence            999999999999999999996541   1 1235999999999999999999999999999999999999876421     


Q ss_pred             ccccCCcCCCccceeEEeee
Q 009497          505 NDMFGLTAPKACRLVAVPSY  524 (533)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~  524 (533)
                      .. + .+..|++++.|+++|
T Consensus       445 ~~-~-~~~~p~~g~~~~~~~  462 (463)
T PLN02774        445 MK-F-PRVEAPNGLHIRVSP  462 (463)
T ss_pred             cc-C-CCCCCCCCceEEeee
Confidence            11 1 123367888888774


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=4.5e-70  Score=557.03  Aligned_cols=452  Identities=19%  Similarity=0.301  Sum_probs=340.5

Q ss_pred             CCCCCCCCceeecccccCccchhHHHHHHHHh---CCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchhhh
Q 009497           38 YPPGPKGYPIIGNMAMMDQLTHRGLADLAKKY---GGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYL  114 (533)
Q Consensus        38 ~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~ky---G~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~~  114 (533)
                      .+|||+++|++|+++.+..+ +..+.+|.++|   |++|++++|+.++|+++||+.+++|+.++...+.+..........
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~  109 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV  109 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence            47899999999998765333 45567888888   899999999999999999999999998764555544322111111


Q ss_pred             ccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH--HHHHHHHHHHHhh--cCCeechhHHHHHHHHHHHHHHh
Q 009497          115 TYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR--EEVDSTLQTVMNT--TGSKVNIGELVFALTRNITYRAA  190 (533)
Q Consensus       115 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~--~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~~~~~~  190 (533)
                      . .+ +++++.+|+.|+++||.+ .+.|+..+++.+.+.+  +.++.+++.+.+.  .++++|+.++++.+++|+++.++
T Consensus       110 ~-~g-~~l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        110 L-LG-DGIFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             H-hc-CeeeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence            1 12 346777899999999997 8999999999988865  5566777766542  46789999999999999999999


Q ss_pred             hcCCCCCc-----hHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009497          191 FGSFSHDG-----QDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVR  265 (533)
Q Consensus       191 fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (533)
                      ||.+++..     ...+...+........ ......++.+.........+.+.+....+.+++.+++++++++.......
T Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (516)
T PLN03195        187 FGVEIGTLSPSLPENPFAQAFDTANIIVT-LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKS  265 (516)
T ss_pred             hCCCccccccCCCccHHHHHHHHHHHHHH-HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99987632     1234444433322111 00111111111111112234455677788888888888877654321000


Q ss_pred             cccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Q 009497          266 DEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAEL  345 (533)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L  345 (533)
                                   ......|+++.+++...+.             +..++++++.++++++++||+|||+++++|++|+|
T Consensus       266 -------------~~~~~~d~l~~ll~~~~~~-------------~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L  319 (516)
T PLN03195        266 -------------GKKVKHDILSRFIELGEDP-------------DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMI  319 (516)
T ss_pred             -------------cccccccHHHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHH
Confidence                         0023468999999754321             13689999999999999999999999999999999


Q ss_pred             hhCchHHHHHHHHHHHHhcC--------------------CcccCcccccCCcchhHHHHHhhcCCCCCccccccccccc
Q 009497          346 MKSPYDLKKVQEELAEKVGL--------------------TRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNT  405 (533)
Q Consensus       346 ~~~p~~~~~lr~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~  405 (533)
                      ++||++|+|||+||+++++.                    ++.++++++++||||+|||+||||++|+++...|.+.+|.
T Consensus       320 ~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~  399 (516)
T PLN03195        320 MMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDD  399 (516)
T ss_pred             hcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCc
Confidence            99999999999999988642                    3457899999999999999999999999999987777766


Q ss_pred             ee-eceecCCCCEEEeehhhhccCCCCC-CCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHH
Q 009497          406 VV-SGYNIPAKSRVMINAWAIGRDPSAW-EDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVA  483 (533)
Q Consensus       406 ~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~  483 (533)
                      ++ +|+.|||||.|+++.|++||||++| +||++|+||||++++. .....+..|+|||.|+|.|+|++||++|++++++
T Consensus       400 ~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~-~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la  478 (516)
T PLN03195        400 VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGV-FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALA  478 (516)
T ss_pred             CcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCC-cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHH
Confidence            65 9999999999999999999999999 9999999999996431 0112345799999999999999999999999999


Q ss_pred             HHHhhceeecCCCCCCCCCCcccccCCcCCCccceeEEeeecc
Q 009497          484 HLLHCFNWELPDGMSPGELDMNDMFGLTAPKACRLVAVPSYRL  526 (533)
Q Consensus       484 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                      .|+++|++++.++.   +..  .....+..++.++.|+++||.
T Consensus       479 ~ll~~f~~~~~~~~---~~~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        479 LLCRFFKFQLVPGH---PVK--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HHHHhceeEecCCC---cce--eeeeeEEecCCCEEEEEEeCC
Confidence            99999999987653   222  223445678889999999874


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.2e-69  Score=548.38  Aligned_cols=448  Identities=18%  Similarity=0.290  Sum_probs=337.2

Q ss_pred             CCCCCCCCCCceeecccccCccch---hHHHHHHHHhCCeEE---EeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCccc
Q 009497           36 LPYPPGPKGYPIIGNMAMMDQLTH---RGLADLAKKYGGLLH---LQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANV  109 (533)
Q Consensus        36 ~~~ppgP~~~P~lG~~~~~~~~~~---~~~~~~~~kyG~v~~---i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~  109 (533)
                      .+..|||+++|++|++..+..+..   +++.+...+||..++   .++|+.++|+|+||+.+++|+.++...|++.+...
T Consensus        30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~  109 (500)
T PLN02169         30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK  109 (500)
T ss_pred             cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence            335789999999999976633332   333444445886655   57799999999999999999998766666654322


Q ss_pred             chhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHh--HHHHH-HHHHHHHHHHHhh--cCCeechhHHHHHHHHH
Q 009497          110 AITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREES--WASVR-EEVDSTLQTVMNT--TGSKVNIGELVFALTRN  184 (533)
Q Consensus       110 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~--~~~~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~  184 (533)
                      ...  .. .+++++..+|+.|+++||.+ .+.|+...++.  +.+.+ ++++.+++.+.+.  .++.+|+.+.+..+++|
T Consensus       110 ~~~--~~-~g~gl~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~d  185 (500)
T PLN02169        110 KIF--DV-LGEGILTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFD  185 (500)
T ss_pred             HHH--Hh-hcCcccccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHH
Confidence            211  11 22567777899999999998 79999887763  33555 7777788877653  35689999999999999


Q ss_pred             HHHHHhhcCCCCCc-----hHHHHHHHHHHHHHhcccccccchhhhc----ccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 009497          185 ITYRAAFGSFSHDG-----QDEFVKILQEFSKLFGAFNIADFFPWMG----WINARGFYKRMARARESLDGFIDSIIDEH  255 (533)
Q Consensus       185 ~~~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (533)
                      ++++++||.+.+..     ..++...+........   ...+.|++.    .+......++..++.+.+.+++.++|+++
T Consensus       186 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r  262 (500)
T PLN02169        186 TSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSR  262 (500)
T ss_pred             HHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999876521     1234444443332211   111223211    11123345667788889999999999888


Q ss_pred             HHhhhccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHH
Q 009497          256 MKKKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVA  335 (533)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~  335 (533)
                      +++..... +             ..+...|+++.+++...++.        +  ....++++++.+++.++++||+|||+
T Consensus       263 ~~~~~~~~-~-------------~~~~~~d~l~~ll~~~~~~~--------~--~~~~~~~~~i~~~~~~~l~AG~dTTa  318 (500)
T PLN02169        263 RKEEISRA-E-------------TEPYSKDALTYYMNVDTSKY--------K--LLKPKKDKFIRDVIFSLVLAGRDTTS  318 (500)
T ss_pred             HHHhhccc-c-------------ccCCCcCHHHHHHhcccccc--------c--cccCCChHHHHHHHHHHHHhchhHHH
Confidence            76422110 0             00123689999987532110        0  01247889999999999999999999


Q ss_pred             HHHHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCccccccccccce-eeceecCC
Q 009497          336 SAIEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTV-VSGYNIPA  414 (533)
Q Consensus       336 ~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~-i~g~~ip~  414 (533)
                      ++++|++++|++||++|+|+++||++++      +.+++++||||+|||+||||++|++|...|.+.+|.+ ++|+.|||
T Consensus       319 ~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~Ipk  392 (500)
T PLN02169        319 SALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDA  392 (500)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECC
Confidence            9999999999999999999999999864      5789999999999999999999999999988766655 49999999


Q ss_pred             CCEEEeehhhhccCCCCC-CCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeec
Q 009497          415 KSRVMINAWAIGRDPSAW-EDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWEL  493 (533)
Q Consensus       415 G~~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~  493 (533)
                      ||.|+++.|++||||++| +||++||||||+++++.........|+|||+|+|.|+|++||++|+++++++|+++|++++
T Consensus       393 Gt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~  472 (500)
T PLN02169        393 ESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKV  472 (500)
T ss_pred             CCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEE
Confidence            999999999999999999 8999999999996542211123567999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCcccccCCcCCCccceeEEeeec
Q 009497          494 PDGMSPGELDMNDMFGLTAPKACRLVAVPSYR  525 (533)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  525 (533)
                      +++.   ++  ....++++.+++++.+++++|
T Consensus       473 ~~~~---~~--~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        473 IEGH---KI--EAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             cCCC---Cc--ccccceEEecCCCEEEEEEeC
Confidence            7653   22  223467778899999999987


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.4e-69  Score=555.39  Aligned_cols=448  Identities=23%  Similarity=0.400  Sum_probs=340.3

Q ss_pred             eccccc-CccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchhhhccCCCCeEecCCC
Q 009497           49 GNMAMM-DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYG  127 (533)
Q Consensus        49 G~~~~~-~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  127 (533)
                      |++..+ .+.++..+.+++++||+||++++|+.++|+|+||+.+++|+..+...|.+.+.......   ..+..+++.+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~---~~g~~l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEF---VMGKGLIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhh---ccCCceecCCc
Confidence            443444 45577889999999999999999999999999999999999977666665432211111   12235667789


Q ss_pred             hHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCeechhHHHHHHHHHHHHHHhhcCCCCC--chHHH
Q 009497          128 PFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSKVNIGELVFALTRNITYRAAFGSFSHD--GQDEF  202 (533)
Q Consensus       128 ~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~~~~~~fG~~~~~--~~~~~  202 (533)
                      +.|+.+|+.+ .+.|+.+.++.+.+++ ++++++++.+.+.  .|+++|+...+..+++|+++.++||.+++.  ..+.+
T Consensus       220 e~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~  298 (633)
T PLN02738        220 EIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGI  298 (633)
T ss_pred             HHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHH
Confidence            9999999997 8999999999999999 9999999999763  367899999999999999999999998863  22333


Q ss_pred             HHHHHHHHHHhcccccccchhhhcccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhh
Q 009497          203 VKILQEFSKLFGAFNIADFFPWMGWIN--ARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRDEEGKINYNDGEAEA  280 (533)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~p~l~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (533)
                      ...+..............+++|....+  .....++..+..+.+..+..++++.+.+..++....       .. .+...
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~-------~~-~~~~~  370 (633)
T PLN02738        299 VEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQ-------FH-EEYMN  370 (633)
T ss_pred             HHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-------ch-hcccc
Confidence            333333222111111111122211100  111123444555666666666666544322211000       00 00001


Q ss_pred             ccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 009497          281 EADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELMKSPYDLKKVQEELA  360 (533)
Q Consensus       281 ~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  360 (533)
                      ..+.|+++.|++..                 ..++++++.++++++++||+|||+.+++|++++|++||++|+|||+||+
T Consensus       371 ~~~~dil~~Ll~~~-----------------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~  433 (633)
T PLN02738        371 ERDPSILHFLLASG-----------------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVD  433 (633)
T ss_pred             cccchHHHHHHHcC-----------------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            23458999988741                 2579999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEeehhhhccCCCCCCCCCCCCC
Q 009497          361 EKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMINAWAIGRDPSAWEDPDKFNP  440 (533)
Q Consensus       361 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  440 (533)
                      ++++ ++.++++++++||||+|||+|+|||+|+++...|.+.+|++++||.|||||.|+++.|.+||||++|+||++|+|
T Consensus       434 ~v~~-~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~P  512 (633)
T PLN02738        434 SVLG-DRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNP  512 (633)
T ss_pred             HhcC-CCCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCc
Confidence            9998 467899999999999999999999999999988999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCC-CCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCCcCCCcccee
Q 009497          441 ARFLHENAP-DFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELDMNDMFGLTAPKACRLV  519 (533)
Q Consensus       441 eR~l~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (533)
                      |||+.++.. +.......|+|||.|+|.|+|++||++|+++++|+|+++|+|++.++..  ++  ....+.++.+++++.
T Consensus       513 ERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~~--~~~~~~~~~p~~~l~  588 (633)
T PLN02738        513 ERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--PV--KMTTGATIHTTEGLK  588 (633)
T ss_pred             ccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--Cc--ccccceEEeeCCCcE
Confidence            999853211 1122445799999999999999999999999999999999999987642  22  222356677888999


Q ss_pred             EEeeeccCCCC
Q 009497          520 AVPSYRLTCPL  530 (533)
Q Consensus       520 ~~~~~r~~~~~  530 (533)
                      |++++|...+.
T Consensus       589 v~l~~R~~~~~  599 (633)
T PLN02738        589 MTVTRRTKPPV  599 (633)
T ss_pred             EEEEECCCCCC
Confidence            99999976554


No 23 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.1e-69  Score=545.55  Aligned_cols=426  Identities=23%  Similarity=0.373  Sum_probs=342.7

Q ss_pred             CCCCCCCCCCCCceeeccccc-CccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchh
Q 009497           34 KKLPYPPGPKGYPIIGNMAMM-DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAIT  112 (533)
Q Consensus        34 ~~~~~ppgP~~~P~lG~~~~~-~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~  112 (533)
                      ++.+.||||+++|++|++..+ .++++.++.+++++||++|++++++.++|+++||+++++++.++...+.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            456788888889999998765 6789999999999999999999999999999999999999987766553  2221111


Q ss_pred             hhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhcCCeechhHHHHHHHHHHHHHHhh
Q 009497          113 YLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAF  191 (533)
Q Consensus       113 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~f  191 (533)
                      .... +..+++..+|+.|+++||.+ .+.|++++++.+.+.+ ++++++++.|.   ++.+|+.+++..+++++++.++|
T Consensus       110 ~~~~-g~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~f  184 (463)
T PLN02196        110 ERML-GKQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSIF  184 (463)
T ss_pred             HHHc-CcccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHHc
Confidence            1112 33456667899999999998 7899999999999988 88888888874   45799999999999999999999


Q ss_pred             cCCCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc
Q 009497          192 GSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRDEEGKI  271 (533)
Q Consensus       192 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  271 (533)
                      |.+.......+......+...      ...+|+.   .+....++..++.+.+.+++.+.++++.++.            
T Consensus       185 G~~~~~~~~~~~~~~~~~~~~------~~~~~~~---~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~------------  243 (463)
T PLN02196        185 GKDEVLYREDLKRCYYILEKG------YNSMPIN---LPGTLFHKSMKARKELAQILAKILSKRRQNG------------  243 (463)
T ss_pred             CCCCchHHHHHHHHHHHHhcc------hhccccc---CCCccchHHHHHHHHHHHHHHHHHHHHhhcC------------
Confidence            987643222333322222111      1112321   1112234566777888888888887765431            


Q ss_pred             cCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchH
Q 009497          272 NYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELMKSPYD  351 (533)
Q Consensus       272 ~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~  351 (533)
                               ....|+++.+++.   .              ..++++++..+++++++||+|||+++++|++++|++||++
T Consensus       244 ---------~~~~d~l~~ll~~---~--------------~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~v  297 (463)
T PLN02196        244 ---------SSHNDLLGSFMGD---K--------------EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSV  297 (463)
T ss_pred             ---------CCcccHHHHHHhc---C--------------CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHH
Confidence                     2345788888752   1              2689999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcC---CcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEeehhhhccC
Q 009497          352 LKKVQEELAEKVGL---TRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMINAWAIGRD  428 (533)
Q Consensus       352 ~~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d  428 (533)
                      |+|+++|++++.+.   ++.++.++++++|||+|||+|+||++|+++...|.+.+|++++||.|||||.|+++.+++|+|
T Consensus       298 q~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd  377 (463)
T PLN02196        298 LEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHS  377 (463)
T ss_pred             HHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCC
Confidence            99999999998864   456899999999999999999999999999988999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCCccccc
Q 009497          429 PSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELDMNDMF  508 (533)
Q Consensus       429 ~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  508 (533)
                      |++|+||++|+||||++..      .+..++|||.|+|.|+|+++|++|+++++++|+++|+++++++..  .+    .+
T Consensus       378 ~~~~~dP~~F~PeRfl~~~------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~----~~  445 (463)
T PLN02196        378 ADIFSDPGKFDPSRFEVAP------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN--GI----QY  445 (463)
T ss_pred             chhcCCcCccChhhhcCCC------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC--ce----EE
Confidence            9999999999999999632      345799999999999999999999999999999999999876531  12    12


Q ss_pred             CCcCCCccceeEEeeec
Q 009497          509 GLTAPKACRLVAVPSYR  525 (533)
Q Consensus       509 ~~~~~~~~~~~~~~~~r  525 (533)
                      ..+..|+.++.|+++.+
T Consensus       446 ~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        446 GPFALPQNGLPIALSRK  462 (463)
T ss_pred             cccccCCCCceEEEecC
Confidence            33445778888887654


No 24 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=7.8e-71  Score=560.34  Aligned_cols=448  Identities=30%  Similarity=0.555  Sum_probs=360.9

Q ss_pred             CCCCCCCceeecccccC--ccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchhh-hc
Q 009497           39 PPGPKGYPIIGNMAMMD--QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITY-LT  115 (533)
Q Consensus        39 ppgP~~~P~lG~~~~~~--~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~-~~  115 (533)
                      ||||+++|++||+..+.  ++++.++.+++++||+||++++++.++++|+||+.+++|+.++...++.++....... ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999985  7889999999999999999999999999999999999999987766665533222222 11


Q ss_pred             cCCCCeEecCCChHHHHHHhhhhhhcCchh-HHHhHHHHH-HHHHHHHHHHHhhcCC--eechhHHHHHHHHHHHHHHhh
Q 009497          116 YDRADMAFANYGPFWRQMRKICVIKLFSRR-REESWASVR-EEVDSTLQTVMNTTGS--KVNIGELVFALTRNITYRAAF  191 (533)
Q Consensus       116 ~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~-~~~~~~~~~-~~~~~l~~~l~~~~~~--~~d~~~~~~~~~~~~~~~~~f  191 (533)
                      ......++..+|+.|+.+|+.+ .+.|+.. .+ .+.+.+ +.++.+++.|....+.  .+|+.++++.+++|+++.++|
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f  158 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF  158 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence            2233556677789999999997 6777766 56 888888 9999999999986644  599999999999999999999


Q ss_pred             cCCCCC-ch---HHHHHHHHHHHHHhccc--ccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009497          192 GSFSHD-GQ---DEFVKILQEFSKLFGAF--NIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVR  265 (533)
Q Consensus       192 G~~~~~-~~---~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (533)
                      |.+++. ..   .++.+.++.+...+...  .....+|++.+ .+....+...++.+.+.+++.++++++.++.+...  
T Consensus       159 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--  235 (463)
T PF00067_consen  159 GKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKY-LPTPLFRRFKRARDRLRKYIKEIIEERREELDDGD--  235 (463)
T ss_dssp             SSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSS--
T ss_pred             cceeeecccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc--
Confidence            998662 21   24555555554433221  23455665443 34445677777888999999999999888765420  


Q ss_pred             cccccccCCCCchhhccchhHHHHHHHcc-ccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHH
Q 009497          266 DEEGKINYNDGEAEAEADTDMVDELMAFY-SEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAE  344 (533)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~dll~~ll~~~-~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~  344 (533)
                                     ....|+++.++... ..++            +..++++++..+++.+++||+|||+.+++|++++
T Consensus       236 ---------------~~~~d~l~~ll~~~~~~~~------------~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~  288 (463)
T PF00067_consen  236 ---------------ESRRDLLDSLLQASSDSDG------------PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYE  288 (463)
T ss_dssp             ---------------SSCSSHHHHHHHHHHTTTT------------TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------------ccccccccccccccccccc------------cccccccccccccccccccccccccccccccccc
Confidence                           35679999999876 2221            1379999999999999999999999999999999


Q ss_pred             HhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCc-cccccccccceeeceecCCCCEEEeehh
Q 009497          345 LMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIP-LLLHETASNTVVSGYNIPAKSRVMINAW  423 (533)
Q Consensus       345 L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~~~~i~g~~ip~G~~v~~~~~  423 (533)
                      |++||++|+|||+||+++.+.++.++.+++++||||+|||+||+|++|+++ ...|.+.+|++++||.|||||.|+++.+
T Consensus       289 L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~  368 (463)
T PF00067_consen  289 LAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIY  368 (463)
T ss_dssp             HHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999987778999999999999999999999999999 5569999999999999999999999999


Q ss_pred             hhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCC
Q 009497          424 AIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELD  503 (533)
Q Consensus       424 ~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~  503 (533)
                      ++|+||++|+||++|+||||++++. ........|+|||.|+|.|+|++||++|+++++|+||++|||+++++..+.+. 
T Consensus       369 ~~~~d~~~~~dp~~F~P~R~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~-  446 (463)
T PF00067_consen  369 ALHRDPEYFPDPDEFDPERFLDERG-ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQ-  446 (463)
T ss_dssp             HHTTSTTTSSSTTS--TTGGBTTTS-TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEE-
T ss_pred             ccccccccccccccccccccccccc-ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCc-
Confidence            9999999999999999999998763 12345678999999999999999999999999999999999999876532221 


Q ss_pred             cccccCCcCCCccceeEEe
Q 009497          504 MNDMFGLTAPKACRLVAVP  522 (533)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~  522 (533)
                       ....+.+ .++.++.|.+
T Consensus       447 -~~~~~~~-~~~~~~~~~~  463 (463)
T PF00067_consen  447 -EQQNGFL-LPPKPLKVKF  463 (463)
T ss_dssp             -ECSCSSS-EEESSSEEEE
T ss_pred             -cccCceE-eeCCCcEEeC
Confidence             2211343 3455666653


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.1e-69  Score=541.73  Aligned_cols=438  Identities=21%  Similarity=0.278  Sum_probs=344.1

Q ss_pred             cCCCCCCCCCCCCceeeccccc-----CccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCc
Q 009497           33 RKKLPYPPGPKGYPIIGNMAMM-----DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPA  107 (533)
Q Consensus        33 ~~~~~~ppgP~~~P~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~  107 (533)
                      .++.+.||||.++|++|+++.+     ..+++.++.+++++||+||++++|+.++|+++||+++++++.+++..+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4567789999999999999876     24688999999999999999999999999999999999999987776664422


Q ss_pred             ccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHh-HHHHH-HHHHHHHHHHHhhcCCeechhHHHHHHHHHH
Q 009497          108 NVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREES-WASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNI  185 (533)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~-~~~~~-~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~~  185 (533)
                      . ..... . +.++++..+|+.|+++|+.+ .+.|+...+.. +.+.+ +.++++++.+.  .++.+|+.+.+..+++++
T Consensus        83 ~-~~~~l-~-g~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v  156 (452)
T PLN03141         83 K-SLTEL-M-GKSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR--DDPPVLVQDETKKIAFEV  156 (452)
T ss_pred             h-hHHHH-h-CcccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc--CCCCEEhHHHHHHHHHHH
Confidence            1 11111 1 23456677899999999997 77787766654 34444 66666666653  356799999999999999


Q ss_pred             HHHHhhcCCCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009497          186 TYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVR  265 (533)
Q Consensus       186 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (533)
                      +++++||.+.++....+...+..+.....      .+|.+   .+.....+..++.+.+.+++..+++++++....+...
T Consensus       157 i~~~~~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  227 (452)
T PLN03141        157 LVKALISLEPGEEMEFLKKEFQEFIKGLM------SLPIK---LPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEED  227 (452)
T ss_pred             HHHHHcCCCchHHHHHHHHHHHHHhhhHH------hCccC---CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence            99999998765332333333333332211      12211   1111223445678889999999998887654321000


Q ss_pred             cccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Q 009497          266 DEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAEL  345 (533)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L  345 (533)
                                   ......|+++.+++..  .              ..++++++..++.++++||+|||+++++|++++|
T Consensus       228 -------------~~~~~~d~l~~ll~~~--~--------------~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L  278 (452)
T PLN03141        228 -------------ETGIPKDVVDVLLRDG--S--------------DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFL  278 (452)
T ss_pred             -------------ccCChhhHHHHHHhcC--C--------------CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Confidence                         0012358999888743  1              2589999999999999999999999999999999


Q ss_pred             hhCchHHHHHHHHHHHHhc----CCcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEee
Q 009497          346 MKSPYDLKKVQEELAEKVG----LTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMIN  421 (533)
Q Consensus       346 ~~~p~~~~~lr~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~~  421 (533)
                      ++||++|+++++|++++.+    .++.++.+++.+||||+|||+|++|++|+++.+.|.+.+|++++||.||||+.|+++
T Consensus       279 ~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~  358 (452)
T PLN03141        279 SDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAY  358 (452)
T ss_pred             HhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEe
Confidence            9999999999999998763    245578899999999999999999999999877799999999999999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCC
Q 009497          422 AWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGE  501 (533)
Q Consensus       422 ~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  501 (533)
                      .+++|+||++|+||++|+||||++++     ..+..|+|||+|+|.|+|++||++|+++++|.|+++|+++++++.   .
T Consensus       359 ~~~~~~d~~~~~dP~~F~PeRfl~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~  430 (452)
T PLN03141        359 FRSVHLDEENYDNPYQFNPWRWQEKD-----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---I  430 (452)
T ss_pred             hHhccCCchhcCCccccCcccccCCC-----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---e
Confidence            99999999999999999999999653     134579999999999999999999999999999999999987653   1


Q ss_pred             CCcccccCCcCCCccceeEEeeeccC
Q 009497          502 LDMNDMFGLTAPKACRLVAVPSYRLT  527 (533)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~r~~  527 (533)
                      .     ...++.|+.++.|++.+|+.
T Consensus       431 ~-----~~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        431 V-----NFPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             e-----ecccccCCCCceEEEEeCCC
Confidence            1     12467788999999999975


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.8e-68  Score=533.40  Aligned_cols=436  Identities=21%  Similarity=0.310  Sum_probs=339.6

Q ss_pred             hhcCCCCCCCCCCCCceeecccccC-----ccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCC
Q 009497           31 TLRKKLPYPPGPKGYPIIGNMAMMD-----QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANR  105 (533)
Q Consensus        31 ~~~~~~~~ppgP~~~P~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~  105 (533)
                      ...++.+.||||.++|++|+++.+.     ++++.++.+++++||++|+++++++++|+|+||+++++++.++...|.++
T Consensus        24 ~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~  103 (472)
T PLN02987         24 TRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECS  103 (472)
T ss_pred             hccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEec
Confidence            3344567889999999999998762     46888999999999999999999999999999999999999887777554


Q ss_pred             CcccchhhhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHH-H-HHHHHHHHHHHhhcCCeechhHHHHHHHH
Q 009497          106 PANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASV-R-EEVDSTLQTVMNTTGSKVNIGELVFALTR  183 (533)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~-~-~~~~~l~~~l~~~~~~~~d~~~~~~~~~~  183 (533)
                      .........   +.++++..+|+.|+++|+.+ .++++.+.++.+... + +.++..++.|    ++++++.+.+..+++
T Consensus       104 ~~~~~~~~l---g~~~l~~~~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~  175 (472)
T PLN02987        104 YPGSISNLL---GKHSLLLMKGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITF  175 (472)
T ss_pred             CcHHHHHHh---CcccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHH
Confidence            322122212   22345566899999999996 555555554443211 1 3333444444    246999999999999


Q ss_pred             HHHHHHhhcCCCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009497          184 NITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKN  263 (533)
Q Consensus       184 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (533)
                      +++++++||.+.++..+.+...+.......    ....+|++     ....++..++.+.+.+++.++++++++....+ 
T Consensus       176 ~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-  245 (472)
T PLN02987        176 ELTVKQLMSFDPGEWTESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRRKEEEEG-  245 (472)
T ss_pred             HHHHHHHcCCCChHHHHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-
Confidence            999999999876533333333222222111    11123332     12356677888999999999999887643211 


Q ss_pred             cccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 009497          264 VRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMA  343 (533)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~  343 (533)
                                      .....|+++.+++..                 ..++++++..++.++++||+|||+.+++|+++
T Consensus       246 ----------------~~~~~d~l~~ll~~~-----------------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~  292 (472)
T PLN02987        246 ----------------AEKKKDMLAALLASD-----------------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVK  292 (472)
T ss_pred             ----------------CcccccHHHHHHhcC-----------------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence                            023468999999742                 15899999999999999999999999999999


Q ss_pred             HHhhCchHHHHHHHHHHHHhc---CCcccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEe
Q 009497          344 ELMKSPYDLKKVQEELAEKVG---LTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMI  420 (533)
Q Consensus       344 ~L~~~p~~~~~lr~Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~  420 (533)
                      +|++||++|+++++|++++.+   .+..++.+++.+|||++||++|+||++|+++...|.+.+|++++||.||||+.|++
T Consensus       293 ~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~  372 (472)
T PLN02987        293 FLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFA  372 (472)
T ss_pred             HHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEE
Confidence            999999999999999999875   23567889999999999999999999999987779999999999999999999999


Q ss_pred             ehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCC
Q 009497          421 NAWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPG  500 (533)
Q Consensus       421 ~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~  500 (533)
                      +.+.+|+||++|+||++|+||||+++...  ......++|||.|+|.|+|++||++|++++++.|+++|++++.++.+  
T Consensus       373 ~~~~~~~d~~~~~~p~~F~PeRfl~~~~~--~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--  448 (472)
T PLN02987        373 SFRAVHLDHEYFKDARTFNPWRWQSNSGT--TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK--  448 (472)
T ss_pred             ehHHhhCCcccCCCccccCcccCCCCCCC--CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc--
Confidence            99999999999999999999999975421  12335799999999999999999999999999999999999876532  


Q ss_pred             CCCcccccCCcCCCccceeEEeeecc
Q 009497          501 ELDMNDMFGLTAPKACRLVAVPSYRL  526 (533)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~~~~~~~r~  526 (533)
                       +    .+..+..|.+++.+++++|.
T Consensus       449 -~----~~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        449 -L----VFFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             -e----eecccccCCCCceEEEEecc
Confidence             1    12447788889999999985


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.8e-68  Score=542.80  Aligned_cols=437  Identities=23%  Similarity=0.312  Sum_probs=344.2

Q ss_pred             CCCCCCCCCCCceeeccccc-----CccchhHHHHHHHHhCC--eEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCc
Q 009497           35 KLPYPPGPKGYPIIGNMAMM-----DQLTHRGLADLAKKYGG--LLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPA  107 (533)
Q Consensus        35 ~~~~ppgP~~~P~lG~~~~~-----~~~~~~~~~~~~~kyG~--v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~  107 (533)
                      +.+.||||+++|++|+++.+     ..+++.++.+++++||+  +|++++++.++|+++||+++++|+.++ ..|.+...
T Consensus        40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~  118 (490)
T PLN02302         40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP  118 (490)
T ss_pred             CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence            45789999999999998766     34788999999999997  799999999999999999999999865 44443322


Q ss_pred             ccchhhhccCCCCeEecCCChHHHHHHhhhhhhcC-chhHHHhHHHHH-HHHHHHHHHHHhhcCCeechhHHHHHHHHHH
Q 009497          108 NVAITYLTYDRADMAFANYGPFWRQMRKICVIKLF-SRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNI  185 (533)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f-s~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~~  185 (533)
                      .....  .. +...++..+|+.|+++|+.+ .+.| +++.++.+.+.+ ++++++++.+..  ++.+|+.+.+..+++++
T Consensus       119 ~~~~~--~~-g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~v  192 (490)
T PLN02302        119 ESTVE--LI-GRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFKI  192 (490)
T ss_pred             hhHHH--Hh-ccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHHH
Confidence            11111  11 22345556899999999998 6777 578899899988 889999998863  34699999999999999


Q ss_pred             HHHHhhcCCCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009497          186 TYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVR  265 (533)
Q Consensus       186 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (533)
                      +++++||.+.+...+.+......+.......  ...+|       ....++..+..+.+.+++.+.++++++.....   
T Consensus       193 i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p-------~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~---  260 (490)
T PLN02302        193 IMYIFLSSESELVMEALEREYTTLNYGVRAM--AINLP-------GFAYHRALKARKKLVALFQSIVDERRNSRKQN---  260 (490)
T ss_pred             HHHHHcCCCChHHHHHHHHHHHHHHHHhhhC--CcCCC-------chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc---
Confidence            9999999887643333333222222211110  00111       11123445566778888888888876543211   


Q ss_pred             cccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Q 009497          266 DEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAEL  345 (533)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L  345 (533)
                                   ......|+++.+++...++             +..++++++..++.++++||+|||+++++|++++|
T Consensus       261 -------------~~~~~~d~l~~ll~~~~~~-------------~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L  314 (490)
T PLN02302        261 -------------ISPRKKDMLDLLLDAEDEN-------------GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFL  314 (490)
T ss_pred             -------------CCCCcCCHHHHHHhhhccC-------------CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence                         0023468999999764332             13589999999999999999999999999999999


Q ss_pred             hhCchHHHHHHHHHHHHhcCC----cccCcccccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEee
Q 009497          346 MKSPYDLKKVQEELAEKVGLT----RILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMIN  421 (533)
Q Consensus       346 ~~~p~~~~~lr~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~~  421 (533)
                      ++||++|+|+|+|++++++..    ..++.+++++||||+|||+|++|++|+++...|.+.+|++++||.||||+.|.++
T Consensus       315 ~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~  394 (490)
T PLN02302        315 QEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAW  394 (490)
T ss_pred             HhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEee
Confidence            999999999999999998642    1378899999999999999999999999988899999999999999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCC
Q 009497          422 AWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGE  501 (533)
Q Consensus       422 ~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  501 (533)
                      .+++|+||++|+||++|+||||++..     .....++|||.|+|.|+|++||.+|++++++.|+++|++++.++.    
T Consensus       395 ~~~~~rd~~~~~dP~~F~PeR~~~~~-----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----  465 (490)
T PLN02302        395 FRQVHMDPEVYPNPKEFDPSRWDNYT-----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----  465 (490)
T ss_pred             HHHhcCCcccCCCccccChhhcCCCC-----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----
Confidence            99999999999999999999999643     234579999999999999999999999999999999999987542    


Q ss_pred             CCcccccCCcCCCccceeEEeeeccC
Q 009497          502 LDMNDMFGLTAPKACRLVAVPSYRLT  527 (533)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~r~~  527 (533)
                      ..+.  ...+..|+.++.|++++|+.
T Consensus       466 ~~~~--~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        466 CKVM--YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             Ccce--eCCCCCCCCCceEEEEeccC
Confidence            1122  22336778889999998864


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2e-67  Score=483.37  Aligned_cols=444  Identities=24%  Similarity=0.386  Sum_probs=361.1

Q ss_pred             CCCCCCC-CCceeecccccCccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchhhhc
Q 009497           37 PYPPGPK-GYPIIGNMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLT  115 (533)
Q Consensus        37 ~~ppgP~-~~P~lG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~~~  115 (533)
                      ..||.-+ |+||+|++..++++|.+++++.++||||||++.++|+.+.++.||+....+++.+...++-...+.......
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            4666654 579999999999999999999999999999999999999999999999999987644333222222222222


Q ss_pred             cCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHH-HHhhcCCeechhHHHHHHHHHHHHHHhhcC
Q 009497          116 YDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQT-VMNTTGSKVNIGELVFALTRNITYRAAFGS  193 (533)
Q Consensus       116 ~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~-l~~~~~~~~d~~~~~~~~~~~~~~~~~fG~  193 (533)
                      + +.+.+....+....++.+++ .......+++++.+.+ ++.++.++. |.+ +|....+..+...+++.+...++||+
T Consensus       111 F-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~e  187 (486)
T KOG0684|consen  111 F-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGGE  187 (486)
T ss_pred             c-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhhh
Confidence            2 33456566677777787886 6777888999999999 999999888 554 66677888888889898888888887


Q ss_pred             CCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccC
Q 009497          194 FSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRDEEGKINY  273 (533)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  273 (533)
                      ....-+.+....+.+++..+..+  ...||.   ..+....++..++++.+.+.....+.++++..+             
T Consensus       188 ~r~~~d~~~a~l~~dLd~~F~~~--d~~FP~---~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s-------------  249 (486)
T KOG0684|consen  188 VRDQLDADVAKLYHDLDQGFQPF--DFLFPY---NLPIPLLRRRDRARKKISKIFSKIILDRRASIS-------------  249 (486)
T ss_pred             hhhhhcchHHHHHHHHhccccch--Hhhccc---CCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc-------------
Confidence            66643345556666666655443  334553   112223455568888888888888888777543             


Q ss_pred             CCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHH
Q 009497          274 NDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELMKSPYDLK  353 (533)
Q Consensus       274 ~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~~~  353 (533)
                             ..+.|+++.+++.+.++              ...+++|+...++.+++||+.||+.|.+|++++|++|||+++
T Consensus       250 -------~~~~dmlq~l~~~y~dg--------------~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~  308 (486)
T KOG0684|consen  250 -------KWDNDMLQSLMEKYKDG--------------RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQK  308 (486)
T ss_pred             -------cccHHHHHHHHHHhhcC--------------CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHH
Confidence                   45678999999844333              478999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCcc-cCcccccCCcchhHHHHHhhcCCCCCccccccccccceeec----eecCCCCEEEeehhhhccC
Q 009497          354 KVQEELAEKVGLTRI-LHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSG----YNIPAKSRVMINAWAIGRD  428 (533)
Q Consensus       354 ~lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g----~~ip~G~~v~~~~~~~~~d  428 (533)
                      .+++|+.+++|++.. ++.+.++++|+|++||+|||||+||.+...|.+.+|.++.+    |.||+|..|.++++.+|+|
T Consensus       309 a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~  388 (486)
T KOG0684|consen  309 AVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRD  388 (486)
T ss_pred             HHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCC
Confidence            999999999998765 99999999999999999999999999999999999999965    9999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCCCCCCC-CCCCc--ccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCCcc
Q 009497          429 PSAWEDPDKFNPARFLHENAPD-FTGNH--FEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELDMN  505 (533)
Q Consensus       429 ~~~~~~p~~F~PeR~l~~~~~~-~~~~~--~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  505 (533)
                      |++|+||+.|+||||+++++.+ ..+..  ..++|||+|.|.|||+.||.+|++.++..+|++||+++.+|. ..++|..
T Consensus       389 peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~-~P~~d~s  467 (486)
T KOG0684|consen  389 PEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGP-FPEVDYS  467 (486)
T ss_pred             ccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCC-CCCCCHH
Confidence            9999999999999999877543 22333  345999999999999999999999999999999999999973 2344443


Q ss_pred             cccCCcCCCccceeEEeeecc
Q 009497          506 DMFGLTAPKACRLVAVPSYRL  526 (533)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~r~  526 (533)
                      .   .++.|..++.|+.+.|+
T Consensus       468 ~---~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  468 R---MVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             H---hhcCCCCCceEEEeecC
Confidence            3   36788999999999886


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=2.1e-66  Score=524.99  Aligned_cols=456  Identities=22%  Similarity=0.324  Sum_probs=350.2

Q ss_pred             CCCCCCCCceeeccccc-----CccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchh
Q 009497           38 YPPGPKGYPIIGNMAMM-----DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAIT  112 (533)
Q Consensus        38 ~ppgP~~~P~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~  112 (533)
                      .-.|-.+||++|..+.+     ...++..+.+|+++||+||++++|+.++|+++||+++++|+.+.+..|.+++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            34577889999988766     4678899999999999999999999999999999999999987666776654322111


Q ss_pred             hhccCCCCeEecCCChHHHHHHhhhhhhcCchhHHHhHHH-HH-HHHHHHHHHHHhh--cCCeechhHHHHHHHHHHHHH
Q 009497          113 YLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWAS-VR-EEVDSTLQTVMNT--TGSKVNIGELVFALTRNITYR  188 (533)
Q Consensus       113 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~-~~-~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~~~~  188 (533)
                      ..  .+ +.++..+|+.|+++||.+ .+.|+.+.++.+.+ ++ ++++.+++.+.+.  .|+++|+.++++.+++|+++.
T Consensus        93 ~~--~~-~~i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         93 FL--FG-SGFAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             HH--hc-CccccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            11  12 456667899999999997 89999888887644 66 8899999998764  367899999999999999999


Q ss_pred             HhhcCCCCCc--hHHHHHHHHHHHHHhcccccccchhhhccc---ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009497          189 AAFGSFSHDG--QDEFVKILQEFSKLFGAFNIADFFPWMGWI---NARGFYKRMARARESLDGFIDSIIDEHMKKKKKKN  263 (533)
Q Consensus       189 ~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (533)
                      ++||.+++..  ..++.+.+........ .....++|++...   ......++..++.+.+.+++.+.++++++..++..
T Consensus       169 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~  247 (489)
T PLN02936        169 SVFNYNFDSLTTDSPVIQAVYTALKEAE-TRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEG  247 (489)
T ss_pred             HHcCCCccccccCcHHHHHHHHHHHHHH-HhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999998732  2233443333322211 1112233432210   01112445667778888888888887765443211


Q ss_pred             cccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 009497          264 VRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMA  343 (533)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~  343 (533)
                      ...       ...+.....+.|+++.+++..                 ..++.+++..+++++++||+|||+++++|+++
T Consensus       248 ~~~-------~~~~~~~~~~~d~l~~ll~~~-----------------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~  303 (489)
T PLN02936        248 EVI-------EGEEYVNDSDPSVLRFLLASR-----------------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLY  303 (489)
T ss_pred             ccc-------ccccccccCchHHHHHHHhcc-----------------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            000       000000023468899888642                 25789999999999999999999999999999


Q ss_pred             HHhhCchHHHHHHHHHHHHhcCCcccCcccccCCcchhHHHHHhhcCCCCCcccc-ccccccceeeceecCCCCEEEeeh
Q 009497          344 ELMKSPYDLKKVQEELAEKVGLTRILHDSDLKQLTYLKCCIKETLRLHPPIPLLL-HETASNTVVSGYNIPAKSRVMINA  422 (533)
Q Consensus       344 ~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~~~~i~g~~ip~G~~v~~~~  422 (533)
                      +|++||++|+|+|+||+++++. +.++++++++||||+|||+||||++|+++... |.+.+|++++||.||||+.|+++.
T Consensus       304 ~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~  382 (489)
T PLN02936        304 LLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISV  382 (489)
T ss_pred             HHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecH
Confidence            9999999999999999999885 45789999999999999999999999999887 455677778999999999999999


Q ss_pred             hhhccCCCCCCCCCCCCCCccCCCCCC-CCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCC
Q 009497          423 WAIGRDPSAWEDPDKFNPARFLHENAP-DFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGE  501 (533)
Q Consensus       423 ~~~~~d~~~~~~p~~F~PeR~l~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  501 (533)
                      +++||||++|+||++|+||||+.++.. ........|+|||.|+|.|+|++||++|+++++++|+++|+++++++.   +
T Consensus       383 ~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~  459 (489)
T PLN02936        383 YNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---D  459 (489)
T ss_pred             HhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---c
Confidence            999999999999999999999964421 111223579999999999999999999999999999999999988653   2


Q ss_pred             CCcccccCCcCCCccceeEEeeeccCC
Q 009497          502 LDMNDMFGLTAPKACRLVAVPSYRLTC  528 (533)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~r~~~  528 (533)
                      +.  ...+.+..++.++.|+++||..+
T Consensus       460 ~~--~~~~~~~~~~~~~~v~~~~R~~~  484 (489)
T PLN02936        460 IV--MTTGATIHTTNGLYMTVSRRRVP  484 (489)
T ss_pred             cc--eecceEEeeCCCeEEEEEeeeCC
Confidence            22  22345566788999999999855


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=9e-66  Score=519.28  Aligned_cols=434  Identities=21%  Similarity=0.256  Sum_probs=334.3

Q ss_pred             CceeecccccCccchhHHHHHHHHhC-CeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccCCCCcccchhhhccCCCCeEe
Q 009497           45 YPIIGNMAMMDQLTHRGLADLAKKYG-GLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAF  123 (533)
Q Consensus        45 ~P~lG~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (533)
                      .++.|++.....+.+.++..+.++++ .+++++..+.  ++++||+.+++|+..+...|.+.......... ..+ ++++
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~-~~g-~gi~  124 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGD-LLG-RGIF  124 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHH-hcC-Ccee
Confidence            55788887654556778877888888 6788876554  89999999999999776666654332211111 112 4577


Q ss_pred             cCCChHHHHHHhhhhhhcCchhHHHhHH--HHH-HHHHHHHHHHHhhc----CCeechhHHHHHHHHHHHHHHhhcCCCC
Q 009497          124 ANYGPFWRQMRKICVIKLFSRRREESWA--SVR-EEVDSTLQTVMNTT----GSKVNIGELVFALTRNITYRAAFGSFSH  196 (533)
Q Consensus       124 ~~~g~~w~~~Rk~~~~~~fs~~~~~~~~--~~~-~~~~~l~~~l~~~~----~~~~d~~~~~~~~~~~~~~~~~fG~~~~  196 (533)
                      +.+|+.|+++||.+ .+.|+...++.+.  +++ +.++.+++.+.+..    +.++|+.++++.+++|+++.++||.+++
T Consensus       125 ~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  203 (502)
T PLN02426        125 NVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPG  203 (502)
T ss_pred             ecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCc
Confidence            78899999999997 8999998888763  566 66677777776522    3679999999999999999999999876


Q ss_pred             Cc-----hHHHHHHHHHHHHHhcccccccchhhhc---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Q 009497          197 DG-----QDEFVKILQEFSKLFGAFNIADFFPWMG---WINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRDEE  268 (533)
Q Consensus       197 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~l~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  268 (533)
                      ..     ..++.+.+......... .....+|+++   .+.+.+..++..+..+.+.+++.++++++++...        
T Consensus       204 ~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~--------  274 (502)
T PLN02426        204 CLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF--------  274 (502)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc--------
Confidence            22     13444444443322111 1111223221   1112233466777888899999999988765311        


Q ss_pred             ccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhC
Q 009497          269 GKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELMKS  348 (533)
Q Consensus       269 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~  348 (533)
                                  ....|+++.+++..                   .+++++..++.++++||+|||+++++|++|+|++|
T Consensus       275 ------------~~~~dll~~ll~~~-------------------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~  323 (502)
T PLN02426        275 ------------SASKDLLSRFMASI-------------------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKH  323 (502)
T ss_pred             ------------CCcchHHHHHHhcC-------------------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcC
Confidence                        23468999999742                   25688999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCC-cccCcccccCCcchhHHHHHhhcCCCCCcccccccccccee-eceecCCCCEEEeehhhhc
Q 009497          349 PYDLKKVQEELAEKVGLT-RILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVV-SGYNIPAKSRVMINAWAIG  426 (533)
Q Consensus       349 p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~~~  426 (533)
                      |++|+|||+||+++++.+ ..++.+++++||||+|||+|+||++|+++...|.+.+|.++ +|+.|||||.|.++.+++|
T Consensus       324 P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~  403 (502)
T PLN02426        324 PEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMG  403 (502)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhc
Confidence            999999999999998754 36899999999999999999999999999988999988887 8999999999999999999


Q ss_pred             cCCCCC-CCCCCCCCCccCCCCCCCCCCCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCCcc
Q 009497          427 RDPSAW-EDPDKFNPARFLHENAPDFTGNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELDMN  505 (533)
Q Consensus       427 ~d~~~~-~~p~~F~PeR~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  505 (533)
                      |||++| +||++|+||||++++. .....+..++|||+|+|.|+|++||++|++++++.|+++|++++.++..+ .+  .
T Consensus       404 rd~~~~G~dp~~F~PeRwl~~~~-~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~-~~--~  479 (502)
T PLN02426        404 RMERIWGPDCLEFKPERWLKNGV-FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNR-AP--R  479 (502)
T ss_pred             CCccccCcChhhcCccccCCCCC-cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCC-CC--c
Confidence            999999 9999999999997431 11223457999999999999999999999999999999999998654221 11  2


Q ss_pred             cccCCcCCCccceeEEeeeccC
Q 009497          506 DMFGLTAPKACRLVAVPSYRLT  527 (533)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~r~~  527 (533)
                      ...+++..++.++.|++++|..
T Consensus       480 ~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        480 FAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             ccceeEEecCCCEEEEEEEccC
Confidence            2336778889999999999864


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=5.2e-58  Score=455.49  Aligned_cols=407  Identities=14%  Similarity=0.197  Sum_probs=292.3

Q ss_pred             CCCCCCCCCCCceeeccccc-----CccchhHHHHHHHHhCC-eEEEeeCCeeE-------EEEcCHHHHHHHHHh----
Q 009497           35 KLPYPPGPKGYPIIGNMAMM-----DQLTHRGLADLAKKYGG-LLHLQMGAIHV-------VAVSTPDMAKEVLQA----   97 (533)
Q Consensus        35 ~~~~ppgP~~~P~lG~~~~~-----~~~~~~~~~~~~~kyG~-v~~i~~~~~~~-------v~v~dp~~~~~vl~~----   97 (533)
                      +.+.|||+.++|++|++..+     ..++..++.+.++|||+ ||+++++|.++       |+++||++++.+|.+    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            36779999999999999854     45668999999999998 99999988655       999999999999974    


Q ss_pred             CCcccCCCCcccchhhhccCCCC---eEecCCChHHHHHHhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhh--cCCe
Q 009497           98 QDLVFANRPANVAITYLTYDRAD---MAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNT--TGSK  171 (533)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~--~~~~  171 (533)
                      .+..+..... ....   ..+.+   .++..+|+.|+++|+++ .+.|+. .++.+.+.+ +.++++++.|...  .+.+
T Consensus        95 ~~~~~~~~~~-~~~~---l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~  168 (480)
T PLN02648         95 KRDVFTGTYM-PSTA---FTGGYRVLSYLDPSEPKHAKLKSFL-FELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGK  168 (480)
T ss_pred             ccccceeeec-cCcc---ccCCceeeeecCCCCchHHHHHHHH-HHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCC
Confidence            3322322111 1111   22334   66677899999999997 899984 668899988 9999999999653  3457


Q ss_pred             echhHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHH
Q 009497          172 VNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSI  251 (533)
Q Consensus       172 ~d~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (533)
                      +|+.+.++.+++|++++++||.+.++.  .+...+..+.....   ....+|.....               +...++++
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~~--~l~~~~~~~~~~~~---~~~~~p~~~~~---------------l~~~~~~~  228 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSET--ALGSDGPALIQKWL---ALQLAPLASTG---------------LPHVLEEL  228 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcchh--hhccchhHHHHHHH---HHHhhHHHHcC---------------chHHHHHH
Confidence            999999999999999999999876541  12111111111000   00001111000               00001111


Q ss_pred             HHHHHHhh--hccccccccccccCCCCchhhccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHH-HHh
Q 009497          252 IDEHMKKK--KKKNVRDEEGKINYNDGEAEAEADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMD-VMF  328 (533)
Q Consensus       252 i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~-~~~  328 (533)
                      +.++....  ....  .         .....+.-.+.++.+++...+               .+++++|+.++++. +.+
T Consensus       229 i~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~ll~~~~~---------------~~l~~~ei~~~~l~~~~~  282 (480)
T PLN02648        229 LLHTFPLPFFLVKS--D---------YDKLYDFFRASATEALDLAEK---------------FGISREEALHNLLFVLGF  282 (480)
T ss_pred             hhcccCCchhhhhc--c---------HHHHHHHHHHHHHHHHHHHHh---------------cCCCHHHHHHHHHHHHHH
Confidence            10000000  0000  0         000000001112233332111               25899999999875 446


Q ss_pred             cccccHHHHHHHHHHHHhhCch-HHHHHHHHHHHHhcC-CcccCcccccCCcchhHHHHHhhcCCCCCccccccccccce
Q 009497          329 GGTETVASAIEWAMAELMKSPY-DLKKVQEELAEKVGL-TRILHDSDLKQLTYLKCCIKETLRLHPPIPLLLHETASNTV  406 (533)
Q Consensus       329 AG~~tt~~~l~~~l~~L~~~p~-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~  406 (533)
                      +|++|++++++|++|+|++||+ +|+|||+||+++++. ++.++.+++++||||++||+|+||++|+++...|.+.+|++
T Consensus       283 ~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~  362 (480)
T PLN02648        283 NAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFV  362 (480)
T ss_pred             HhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEE
Confidence            7788888899999999999995 999999999999863 45789999999999999999999999999998899999999


Q ss_pred             ee----ceecCCCCEEEeehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCcccccc---------cCCCCCCCcCchh
Q 009497          407 VS----GYNIPAKSRVMINAWAIGRDPSAWEDPDKFNPARFLHENAPDFTGNHFEYIP---------FGSGRRSCPGMQL  473 (533)
Q Consensus       407 i~----g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~  473 (533)
                      ++    ||.||||+.|+++.+.+||||++|+||++||||||++++...    ...+++         ||+|+|.|+|++|
T Consensus       363 l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~----~~~~~~f~~g~~~~~~G~G~R~C~G~~~  438 (480)
T PLN02648        363 IESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK----LLKYVFWSNGRETESPTVGNKQCAGKDF  438 (480)
T ss_pred             EecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc----cccccccCCCcccCCCCCCCccCccHHH
Confidence            96    799999999999999999999999999999999998653211    122333         4677899999999


Q ss_pred             HHHHHHHHHHHHHhhce-eecCCCC
Q 009497          474 GLYALELSVAHLLHCFN-WELPDGM  497 (533)
Q Consensus       474 A~~e~~~~l~~ll~~f~-~~~~~~~  497 (533)
                      |++|+++++++|+++|+ +++.++.
T Consensus       439 A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        439 VVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             HHHHHHHHHHHHHHHhCEEeecCCc
Confidence            99999999999999998 9988774


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.7e-53  Score=418.62  Aligned_cols=382  Identities=24%  Similarity=0.358  Sum_probs=303.3

Q ss_pred             chhHHHHHHHHhCCeEEEeeCCee--EEEEcCHHHHHHHHHhCCcccCCCCcccchh--hhccCCCCeEecCCChHHHHH
Q 009497           58 THRGLADLAKKYGGLLHLQMGAIH--VVAVSTPDMAKEVLQAQDLVFANRPANVAIT--YLTYDRADMAFANYGPFWRQM  133 (533)
Q Consensus        58 ~~~~~~~~~~kyG~v~~i~~~~~~--~v~v~dp~~~~~vl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  133 (533)
                      +......+.+.||.+++++..+..  ++++++++.++++++++. .+++........  .....+...++..||+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            445556677889999988876654  899999999999999764 222222111111  111123334778899999999


Q ss_pred             HhhhhhhcCchhHHHhHHHHH-HHHHHHHHHHHhhcCCeechhHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHH
Q 009497          134 RKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKL  212 (533)
Q Consensus       134 Rk~~~~~~fs~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~  212 (533)
                      ||.+ .+.|+++.++.+.+.+ +.++++++.+ ... +.+++.+++..+++++++ .+||.+.++... +..........
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~-~~~~~~~~~~~  177 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDRPQ-LLRWSDALLLR  177 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHHHH-HHHHHHHHHhc
Confidence            9997 8999999999999999 8899899999 443 788999999999999999 999998875422 22222111111


Q ss_pred             hcccccccchhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhhccchhHHHHHHH
Q 009497          213 FGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMKKKKKKNVRDEEGKINYNDGEAEAEADTDMVDELMA  292 (533)
Q Consensus       213 ~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~  292 (533)
                         .     .|.   ........+..++...+.+++..+|++++.                       ....|+++.++.
T Consensus       178 ---~-----~~~---~~~~~~~~~~~~a~~~~~~~~~~li~~rR~-----------------------~~~~dlls~l~~  223 (411)
T COG2124         178 ---L-----DPD---LGPEEPWRRARAARRELDAYLRALIAERRA-----------------------APRDDLLSLLLS  223 (411)
T ss_pred             ---c-----Ccc---cCCcccHHHHHHHHHHHHHHHHHHHHHhcc-----------------------CCcccHHHHHHH
Confidence               0     011   112223567788899999999999998873                       556799999998


Q ss_pred             ccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCcccCcc
Q 009497          293 FYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTETVASAIEWAMAELMKSPYDLKKVQEELAEKVGLTRILHDS  372 (533)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~  372 (533)
                      +..+++             ..+|++||.+++.++++||||||+++++|++|.|++||++++++++|.+.           
T Consensus       224 a~~~~~-------------~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-----------  279 (411)
T COG2124         224 AEDDGG-------------GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-----------  279 (411)
T ss_pred             HhhCCC-------------CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-----------
Confidence            766552             25999999999999999999999999999999999999999999998764           


Q ss_pred             cccCCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEeehhhhccCCCCCCCCCCCCCCccCCCCCCCCC
Q 009497          373 DLKQLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMINAWAIGRDPSAWEDPDKFNPARFLHENAPDFT  452 (533)
Q Consensus       373 ~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~  452 (533)
                           ||++++++|+||++|+++...|.+.+|++++|+.||||+.|+++.+++||||++|++|++|||+||.        
T Consensus       280 -----~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------  346 (411)
T COG2124         280 -----PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN--------  346 (411)
T ss_pred             -----HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC--------
Confidence                 8999999999999999999669999999999999999999999999999999999999999999996        


Q ss_pred             CCcccccccCCCCCCCcCchhHHHHHHHHHHHHHhhceeecCCCCCCCCCCcccccCCcCCCccceeEEeeec
Q 009497          453 GNHFEYIPFGSGRRSCPGMQLGLYALELSVAHLLHCFNWELPDGMSPGELDMNDMFGLTAPKACRLVAVPSYR  525 (533)
Q Consensus       453 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  525 (533)
                         ..|+|||+|+|.|+|..||++|++++++.++++|++....+ . ..    .....+..+..+..+.++.|
T Consensus       347 ---~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~~----~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         347 ---NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P-PP----LVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             ---CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-CC----ccccccccCCCcceeeeecC
Confidence               36999999999999999999999999999999999887765 1 11    11233444555555655544


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=60.36  E-value=2.4  Score=36.81  Aligned_cols=44  Identities=9%  Similarity=0.098  Sum_probs=32.1

Q ss_pred             CCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEe
Q 009497          376 QLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMI  420 (533)
Q Consensus       376 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~  420 (533)
                      .-..+.|||.|+.-.... ..+.=+..+|+.++|..|||||.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~G-s~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDG-SRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCC-CEEEEEEcCceEECCEEeCCCCEEEE
Confidence            455688999999877632 22122347889999999999998866


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=51.87  E-value=11  Score=25.43  Aligned_cols=8  Identities=38%  Similarity=0.924  Sum_probs=6.2

Q ss_pred             CCCccCCC
Q 009497          439 NPARFLHE  446 (533)
Q Consensus       439 ~PeR~l~~  446 (533)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78999853


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=46.27  E-value=18  Score=24.06  Aligned_cols=25  Identities=28%  Similarity=0.340  Sum_probs=18.9

Q ss_pred             HHHHHHhhCchHHHHHHHHHHHHhc
Q 009497          340 WAMAELMKSPYDLKKVQEELAEKVG  364 (533)
Q Consensus       340 ~~l~~L~~~p~~~~~lr~Ei~~~~~  364 (533)
                      -++.||.+||++.++|.+.=.+.+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            3578999999999999885444443


No 36 
>PHA03049 IMV membrane protein; Provisional
Probab=38.35  E-value=50  Score=22.59  Aligned_cols=6  Identities=33%  Similarity=0.661  Sum_probs=2.3

Q ss_pred             CCCCCC
Q 009497           36 LPYPPG   41 (533)
Q Consensus        36 ~~~ppg   41 (533)
                      ...||.
T Consensus        30 q~~~p~   35 (68)
T PHA03049         30 SQNPPS   35 (68)
T ss_pred             CCCCCC
Confidence            333333


No 37 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=36.60  E-value=10  Score=36.94  Aligned_cols=45  Identities=11%  Similarity=0.120  Sum_probs=33.0

Q ss_pred             CCcchhHHHHHhhcCCCCCccccccccccceeeceecCCCCEEEee
Q 009497          376 QLTYLKCCIKETLRLHPPIPLLLHETASNTVVSGYNIPAKSRVMIN  421 (533)
Q Consensus       376 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~i~g~~ip~G~~v~~~  421 (533)
                      .-..+.|||.|+.-+.- ...+.=+..+|+.++|..|||||.|+-.
T Consensus       254 ~~n~I~A~V~~~qtv~~-G~~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVD-GSAVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEec-CCEEEEEEcCceeeCCEEecCCCEEEEE
Confidence            45568999999987773 2222224578999999999999987654


No 38 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=35.31  E-value=1.1e+02  Score=19.66  Aligned_cols=42  Identities=24%  Similarity=0.224  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHH
Q 009497          318 HIKAIIMDVMFGGTETVASAIEWAMAELMKSPYDLKKVQEEL  359 (533)
Q Consensus       318 ~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  359 (533)
                      ++..++..++=.|-|..+-+++-.|.+.--||+....+..|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666777888888888888888888999988888876


No 39 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=26.66  E-value=1.3e+02  Score=22.20  Aligned_cols=18  Identities=22%  Similarity=0.407  Sum_probs=15.8

Q ss_pred             CchHHHHHHHHHHHHhcC
Q 009497          348 SPYDLKKVQEELAEKVGL  365 (533)
Q Consensus       348 ~p~~~~~lr~Ei~~~~~~  365 (533)
                      .|++...+|+||-+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            389999999999999865


No 40 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=26.29  E-value=2.4e+02  Score=20.74  Aligned_cols=50  Identities=12%  Similarity=0.204  Sum_probs=42.8

Q ss_pred             CCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 009497          314 LTRDHIKAIIMDVMFGGTETVASAIEWAMAELMKSPYDLKKVQEELAEKV  363 (533)
Q Consensus       314 l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  363 (533)
                      -+...........++-=+..++....-.+.+-++||+...++.+.+.+-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            35566667777889999999999999999999999999999999887654


No 41 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=25.53  E-value=1.5e+02  Score=23.81  Aligned_cols=41  Identities=20%  Similarity=0.402  Sum_probs=31.7

Q ss_pred             ccchhHHHHHHHHhCCeEEEeeCCeeEEEEcCHHHHHHHHHhC
Q 009497           56 QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQ   98 (533)
Q Consensus        56 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~   98 (533)
                      .+....+++|.++||.+--.  .+..++...|++.++++....
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            34557889999999986543  256778889999999998754


No 42 
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=25.50  E-value=2.8e+02  Score=20.71  Aligned_cols=40  Identities=15%  Similarity=0.255  Sum_probs=28.9

Q ss_pred             ccchhHHHHHHHccccccccccCCCCCccccCCCCHHHHHHHHHHHHhcccc
Q 009497          281 EADTDMVDELMAFYSEEEGVAAKGDGDDLQSAKLTRDHIKAIIMDVMFGGTE  332 (533)
Q Consensus       281 ~~~~dll~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~  332 (533)
                      ..+++.++.+++..+..            .+..++.+|-+..+..+..|.++
T Consensus        44 ~~d~~~vd~im~~LD~n------------~Dg~vdF~EF~~Lv~~l~~ac~~   83 (91)
T cd05024          44 QNDPMAVDKIMKDLDDC------------RDGKVGFQSFFSLIAGLLIACND   83 (91)
T ss_pred             CCCHHHHHHHHHHhCCC------------CCCcCcHHHHHHHHHHHHHHHHH
Confidence            34567888888776554            23579999999888877777664


No 43 
>PRK06789 flagellar motor switch protein; Validated
Probab=24.96  E-value=76  Score=22.61  Aligned_cols=39  Identities=15%  Similarity=0.136  Sum_probs=30.4

Q ss_pred             HHHHhhcCCCCCcccc-ccccc--cceeeceecCCCCEEEee
Q 009497          383 CIKETLRLHPPIPLLL-HETAS--NTVVSGYNIPAKSRVMIN  421 (533)
Q Consensus       383 ~i~E~lRl~p~~~~~~-R~~~~--~~~i~g~~ip~G~~v~~~  421 (533)
                      -++|.+.+.+....-. |.+.+  |..++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            3789999998776666 66644  566699999999998775


No 44 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=24.95  E-value=2.2e+02  Score=28.67  Aligned_cols=47  Identities=15%  Similarity=0.251  Sum_probs=25.7

Q ss_pred             cchhHHHHHHH-HhCCeEEEeeCCeeEEEEcCHHHHHHHHHhCCcccC
Q 009497           57 LTHRGLADLAK-KYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFA  103 (533)
Q Consensus        57 ~~~~~~~~~~~-kyG~v~~i~~~~~~~v~v~dp~~~~~vl~~~~~~~~  103 (533)
                      ++.+.++-..+ +||.|++-.+-++.+-|=.=|+.-++-+.+...+|+
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            45555555544 688888877766555443334444444444444443


No 45 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=23.80  E-value=66  Score=25.86  Aligned_cols=23  Identities=17%  Similarity=0.421  Sum_probs=17.0

Q ss_pred             CCCcCchhHHHHHHHHHHHHHhh
Q 009497          466 RSCPGMQLGLYALELSVAHLLHC  488 (533)
Q Consensus       466 r~C~G~~~A~~e~~~~l~~ll~~  488 (533)
                      -.|.|+.||...+-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            46999999999999999999964


No 46 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=23.36  E-value=1.9e+02  Score=18.67  Aligned_cols=35  Identities=17%  Similarity=0.331  Sum_probs=25.2

Q ss_pred             HHHHHHHhCCeEEEeeC----CeeEEEEcCHHHHHHHHH
Q 009497           62 LADLAKKYGGLLHLQMG----AIHVVAVSTPDMAKEVLQ   96 (533)
Q Consensus        62 ~~~~~~kyG~v~~i~~~----~~~~v~v~dp~~~~~vl~   96 (533)
                      +.+..++||+|-.+.+.    +.-+|-..+.+.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            35677899999888753    345666689998888876


No 47 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=22.21  E-value=41  Score=22.00  Aligned_cols=9  Identities=67%  Similarity=1.405  Sum_probs=8.2

Q ss_pred             ccCCCCCCC
Q 009497          460 PFGSGRRSC  468 (533)
Q Consensus       460 ~Fg~G~r~C  468 (533)
                      +||-|.|.|
T Consensus        13 kfg~GsrsC   21 (56)
T KOG3506|consen   13 KFGQGSRSC   21 (56)
T ss_pred             ccCCCCcce
Confidence            699999998


No 48 
>PHA02902 putative IMV membrane protein; Provisional
Probab=21.72  E-value=1.3e+02  Score=20.45  Aligned_cols=6  Identities=17%  Similarity=0.241  Sum_probs=2.5

Q ss_pred             HHHHHH
Q 009497           61 GLADLA   66 (533)
Q Consensus        61 ~~~~~~   66 (533)
                      .++.+|
T Consensus        58 QirAlH   63 (70)
T PHA02902         58 QIKALH   63 (70)
T ss_pred             HHHHHH
Confidence            344444


No 49 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=21.68  E-value=57  Score=23.88  Aligned_cols=21  Identities=19%  Similarity=0.464  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHHhhceeecCCC
Q 009497          476 YALELSVAHLLHCFNWELPDG  496 (533)
Q Consensus       476 ~e~~~~l~~ll~~f~~~~~~~  496 (533)
                      .-|+-++..+|+-|||.+++-
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            357889999999999999863


No 50 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=21.51  E-value=1.3e+02  Score=18.13  Aligned_cols=17  Identities=12%  Similarity=0.259  Sum_probs=11.4

Q ss_pred             HHHHH-hhCchHHHHHHH
Q 009497          341 AMAEL-MKSPYDLKKVQE  357 (533)
Q Consensus       341 ~l~~L-~~~p~~~~~lr~  357 (533)
                      .+..+ .+||++++.++.
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            33334 489999887765


No 51 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=21.22  E-value=3.4e+02  Score=20.86  Aligned_cols=39  Identities=23%  Similarity=0.294  Sum_probs=30.9

Q ss_pred             hhHHHHHHHHhCCeEEEeeC------CeeEEEEcCHHHHHHHHHh
Q 009497           59 HRGLADLAKKYGGLLHLQMG------AIHVVAVSTPDMAKEVLQA   97 (533)
Q Consensus        59 ~~~~~~~~~kyG~v~~i~~~------~~~~v~v~dp~~~~~vl~~   97 (533)
                      .+-+-+++-+||.|.+|++|      |.-+||-.|-..++..+..
T Consensus        32 seemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   32 SEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             HHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            35677888899999999988      5667888888887777764


No 52 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=21.14  E-value=54  Score=28.76  Aligned_cols=19  Identities=37%  Similarity=0.756  Sum_probs=17.1

Q ss_pred             hhccCCCCCCCCCCCCCCc
Q 009497          424 AIGRDPSAWEDPDKFNPAR  442 (533)
Q Consensus       424 ~~~~d~~~~~~p~~F~PeR  442 (533)
                      .-+.|+++|.|...|+|-|
T Consensus       193 ~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  193 PDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCcccccCccccCCCC
Confidence            4488999999999999988


No 53 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=20.85  E-value=1.2e+02  Score=24.20  Aligned_cols=6  Identities=67%  Similarity=0.816  Sum_probs=1.5

Q ss_pred             hhhcCC
Q 009497           30 TTLRKK   35 (533)
Q Consensus        30 ~~~~~~   35 (533)
                      +|.+++
T Consensus        89 rR~~Kk   94 (122)
T PF01102_consen   89 RRLRKK   94 (122)
T ss_dssp             HHHS--
T ss_pred             HHHhcc
Confidence            333333


Done!